CLI_RS06170 4014e5749610dc5d240767d6c6ec584c 304 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS06170 4014e5749610dc5d240767d6c6ec584c 304 SMART SM00382 31 211 4.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06170 4014e5749610dc5d240767d6c6ec584c 304 Pfam PF00005 ABC transporter 23 162 1.2E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS06170 4014e5749610dc5d240767d6c6ec584c 304 SUPERFAMILY SSF52540 5 227 1.09E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06170 4014e5749610dc5d240767d6c6ec584c 304 PANTHER PTHR24220 8 235 2.6E-133 T 23-04-2016 CLI_RS06170 4014e5749610dc5d240767d6c6ec584c 304 Gene3D G3DSA:3.40.50.300 3 228 4.8E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06170 4014e5749610dc5d240767d6c6ec584c 304 PANTHER PTHR24220:SF453 8 235 2.6E-133 T 23-04-2016 CLI_RS12015 b53890398b05bd79314197eb5e28c01f 401 PANTHER PTHR21499 1 399 5.5E-141 T 23-04-2016 CLI_RS12015 b53890398b05bd79314197eb5e28c01f 401 Pfam PF13840 ACT domain 333 393 8.7E-19 T 23-04-2016 IPR027795 GATS-like ACT domain CLI_RS12015 b53890398b05bd79314197eb5e28c01f 401 PANTHER PTHR21499:SF27 1 399 5.5E-141 T 23-04-2016 CLI_RS12015 b53890398b05bd79314197eb5e28c01f 401 SUPERFAMILY SSF55021 330 399 2.96E-15 T 23-04-2016 CLI_RS12015 b53890398b05bd79314197eb5e28c01f 401 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS12015 b53890398b05bd79314197eb5e28c01f 401 SUPERFAMILY SSF55021 254 342 1.98E-5 T 23-04-2016 CLI_RS12015 b53890398b05bd79314197eb5e28c01f 401 PIRSF PIRSF000726 48 400 8.7E-83 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS12015 b53890398b05bd79314197eb5e28c01f 401 Pfam PF00696 Amino acid kinase family 2 235 7.0E-51 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS12015 b53890398b05bd79314197eb5e28c01f 401 SUPERFAMILY SSF53633 4 246 7.99E-67 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS12015 b53890398b05bd79314197eb5e28c01f 401 Gene3D G3DSA:3.40.1160.10 1 246 1.1E-60 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS12015 b53890398b05bd79314197eb5e28c01f 401 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 67 397 2.2E-90 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 Gene3D G3DSA:2.10.240.10 228 257 4.1E-10 T 23-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 TIGRFAM TIGR02911 sulfite_red_B: sulfite reductase, subunit B 5 265 3.5E-149 T 23-04-2016 IPR014260 Sulphite reductase, subunit B UniPathway: UPA00370 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 228 257 1.3E-6 T 23-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 PIRSF PIRSF006816 6 264 6.8E-74 T 23-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 SUPERFAMILY SSF63380 7 96 2.87E-17 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 Gene3D G3DSA:2.40.30.10 11 87 5.5E-11 T 23-04-2016 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 SUPERFAMILY SSF52343 91 257 4.45E-30 T 23-04-2016 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 PANTHER PTHR19370 1 250 7.8E-157 T 23-04-2016 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 Pfam PF00175 Oxidoreductase NAD-binding domain 109 209 4.9E-15 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 PANTHER PTHR19370:SF126 1 250 7.8E-157 T 23-04-2016 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 PRINTS PR00406 Cytochrome B5 reductase signature 196 204 1.5E-6 T 23-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 PRINTS PR00406 Cytochrome B5 reductase signature 83 97 1.5E-6 T 23-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 PRINTS PR00406 Cytochrome B5 reductase signature 145 156 1.5E-6 T 23-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 PRINTS PR00406 Cytochrome B5 reductase signature 107 126 1.5E-6 T 23-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 CLI_RS05065 6c6cbb9f5518d85c10a254cf1e3504b4 265 Gene3D G3DSA:3.40.50.80 88 224 8.9E-29 T 23-04-2016 CLI_RS18795 2a9320a62892a5742a5f9b8e069ecdbb 169 Pfam PF14584 Protein of unknown function (DUF4446) 15 162 2.6E-56 T 23-04-2016 IPR027981 Protein of unknown function DUF4446 CLI_RS06325 8c01bdc859140705a1a22c7ce7a7e2ed 322 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 3 320 4.3E-95 T 23-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 CLI_RS06325 8c01bdc859140705a1a22c7ce7a7e2ed 322 PANTHER PTHR10443 1 321 3.3E-108 T 23-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 CLI_RS06325 8c01bdc859140705a1a22c7ce7a7e2ed 322 Gene3D G3DSA:3.20.20.140 2 321 5.2E-105 T 23-04-2016 CLI_RS06325 8c01bdc859140705a1a22c7ce7a7e2ed 322 SUPERFAMILY SSF51556 1 322 1.7E-80 T 23-04-2016 IPR032466 Metal-dependent hydrolase CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 Pfam PF02310 B12 binding domain 672 780 2.1E-22 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 SUPERFAMILY SSF47644 587 663 1.57E-13 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 Pfam PF02574 Homocysteine S-methyltransferase 12 281 1.2E-62 T 23-04-2016 IPR003726 Homocysteine-binding domain CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 Gene3D G3DSA:3.40.50.280 669 788 2.4E-44 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 Gene3D G3DSA:3.20.20.20 321 571 4.0E-95 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 PIRSF PIRSF037472 1 791 0.0 T 23-04-2016 IPR017215 5-methyltetrahydrofolate-homocysteine S-methyltransferase, bacterial CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 SUPERFAMILY SSF82282 2 355 1.44E-106 T 23-04-2016 IPR003726 Homocysteine-binding domain CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 Gene3D G3DSA:1.10.1240.10 583 660 4.1E-19 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 Pfam PF02607 B12 binding domain 588 656 3.4E-13 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 PANTHER PTHR21091 1 358 1.4E-137 T 23-04-2016 CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 SUPERFAMILY SSF51717 314 570 9.55E-85 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 PANTHER PTHR21091:SF109 1 358 1.4E-137 T 23-04-2016 CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 SMART SM01018 582 664 1.1E-24 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 Pfam PF00809 Pterin binding enzyme 316 536 6.5E-36 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 Gene3D G3DSA:3.20.20.330 2 320 1.6E-93 T 23-04-2016 IPR003726 Homocysteine-binding domain CLI_RS08330 fd07547ef141a07357daba4e6dd84551 792 SUPERFAMILY SSF52242 666 789 2.75E-41 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CLI_RS01730 4b26fac330a202e01cd02a0700bacf7a 372 Gene3D G3DSA:1.10.3470.10 27 366 1.1E-106 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS01730 4b26fac330a202e01cd02a0700bacf7a 372 Pfam PF01032 FecCD transport family 37 364 3.6E-94 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS01730 4b26fac330a202e01cd02a0700bacf7a 372 PANTHER PTHR30472:SF32 11 370 9.8E-180 T 23-04-2016 CLI_RS01730 4b26fac330a202e01cd02a0700bacf7a 372 SUPERFAMILY SSF81345 22 364 1.14E-80 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS01730 4b26fac330a202e01cd02a0700bacf7a 372 PANTHER PTHR30472 11 370 9.8E-180 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS12920 8f78820a67d8ebdee6e1c9ffb8f83893 825 SUPERFAMILY SSF52009 714 817 1.12E-30 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLI_RS12920 8f78820a67d8ebdee6e1c9ffb8f83893 825 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 328 1.2E-101 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CLI_RS12920 8f78820a67d8ebdee6e1c9ffb8f83893 825 Gene3D G3DSA:3.30.1490.20 3 184 1.7E-55 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLI_RS12920 8f78820a67d8ebdee6e1c9ffb8f83893 825 SUPERFAMILY SSF56059 3 318 1.07E-95 T 23-04-2016 CLI_RS12920 8f78820a67d8ebdee6e1c9ffb8f83893 825 PANTHER PTHR22931:SF7 729 817 2.7E-167 T 23-04-2016 CLI_RS12920 8f78820a67d8ebdee6e1c9ffb8f83893 825 PANTHER PTHR22931:SF7 3 367 2.7E-167 T 23-04-2016 CLI_RS12920 8f78820a67d8ebdee6e1c9ffb8f83893 825 Gene3D G3DSA:3.50.30.10 711 817 4.5E-30 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLI_RS12920 8f78820a67d8ebdee6e1c9ffb8f83893 825 Pfam PF00391 PEP-utilising enzyme, mobile domain 744 815 4.3E-25 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLI_RS12920 8f78820a67d8ebdee6e1c9ffb8f83893 825 PANTHER PTHR22931 729 817 2.7E-167 T 23-04-2016 CLI_RS12920 8f78820a67d8ebdee6e1c9ffb8f83893 825 PANTHER PTHR22931 3 367 2.7E-167 T 23-04-2016 CLI_RS12920 8f78820a67d8ebdee6e1c9ffb8f83893 825 Gene3D G3DSA:3.30.470.20 185 331 4.0E-44 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS16470 b63950a5b31110fa81bccb0092d90074 298 PIRSF PIRSF000164 1 298 2.8E-77 T 23-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 CLI_RS16470 b63950a5b31110fa81bccb0092d90074 298 PANTHER PTHR11938 11 296 2.6E-54 T 23-04-2016 CLI_RS16470 b63950a5b31110fa81bccb0092d90074 298 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 2 298 39.66 T 23-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 CLI_RS16470 b63950a5b31110fa81bccb0092d90074 298 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 236 256 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 CLI_RS16470 b63950a5b31110fa81bccb0092d90074 298 PANTHER PTHR11938:SF5 11 296 2.6E-54 T 23-04-2016 CLI_RS16470 b63950a5b31110fa81bccb0092d90074 298 Gene3D G3DSA:3.20.20.70 2 297 3.6E-92 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS16470 b63950a5b31110fa81bccb0092d90074 298 Pfam PF01180 Dihydroorotate dehydrogenase 1 283 2.2E-71 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CLI_RS16470 b63950a5b31110fa81bccb0092d90074 298 SUPERFAMILY SSF51395 2 297 1.87E-82 T 23-04-2016 CLI_RS16470 b63950a5b31110fa81bccb0092d90074 298 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 2 297 1.5E-106 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 SUPERFAMILY SSF52096 13 277 2.49E-92 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 10 109 1.6E-47 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 PANTHER PTHR22855 3 279 5.3E-115 T 23-04-2016 CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 114 127 3.45E-44 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 49 60 3.45E-44 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 158 167 3.45E-44 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 74 92 3.45E-44 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 130 143 3.45E-44 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 95 111 3.45E-44 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 9 278 3.9E-125 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 277 41.004 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 PANTHER PTHR22855:SF42 3 279 5.3E-115 T 23-04-2016 CLI_RS18530 80b7fecb90778cb9d4bbb52ce46ae86d 279 Gene3D G3DSA:3.90.226.10 17 235 4.7E-48 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS01810 8d7296e0380997d0dd210a4c775d62bb 620 PIRSF PIRSF018968 1 616 1.6E-123 T 23-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 CLI_RS01810 8d7296e0380997d0dd210a4c775d62bb 620 PANTHER PTHR30489 1 619 0.0 T 23-04-2016 CLI_RS01810 8d7296e0380997d0dd210a4c775d62bb 620 PANTHER PTHR30489:SF13 1 619 0.0 T 23-04-2016 CLI_RS01810 8d7296e0380997d0dd210a4c775d62bb 620 Pfam PF02687 FtsX-like permease family 61 175 9.6E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS14690 f5985bb43204907f44b4d03358e63e91 148 SUPERFAMILY SSF89095 1 146 2.67E-38 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CLI_RS14690 f5985bb43204907f44b4d03358e63e91 148 PANTHER PTHR28055:SF1 1 148 1.0E-44 T 23-04-2016 CLI_RS14690 f5985bb43204907f44b4d03358e63e91 148 Pfam PF09424 Yqey-like protein 4 146 3.3E-49 T 23-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial CLI_RS14690 f5985bb43204907f44b4d03358e63e91 148 PANTHER PTHR28055 1 148 1.0E-44 T 23-04-2016 CLI_RS14690 f5985bb43204907f44b4d03358e63e91 148 Gene3D G3DSA:1.10.10.410 91 147 2.2E-22 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CLI_RS14690 f5985bb43204907f44b4d03358e63e91 148 Gene3D G3DSA:1.10.1510.10 1 90 3.4E-27 T 23-04-2016 CLI_RS11075 598b2d05e24563b9a9f9a304cef07158 197 Gene3D G3DSA:1.10.357.10 63 180 6.9E-12 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS11075 598b2d05e24563b9a9f9a304cef07158 197 PANTHER PTHR30328:SF6 1 174 1.8E-41 T 23-04-2016 CLI_RS11075 598b2d05e24563b9a9f9a304cef07158 197 PANTHER PTHR30328 1 174 1.8E-41 T 23-04-2016 CLI_RS11075 598b2d05e24563b9a9f9a304cef07158 197 SUPERFAMILY SSF46689 6 76 8.72E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS11075 598b2d05e24563b9a9f9a304cef07158 197 Gene3D G3DSA:1.10.10.60 11 62 6.5E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS11075 598b2d05e24563b9a9f9a304cef07158 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.7E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS11075 598b2d05e24563b9a9f9a304cef07158 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.7E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS11075 598b2d05e24563b9a9f9a304cef07158 197 Pfam PF13305 WHG domain 91 175 2.4E-11 T 23-04-2016 IPR025996 WHG domain CLI_RS11075 598b2d05e24563b9a9f9a304cef07158 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 2.3E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS11075 598b2d05e24563b9a9f9a304cef07158 197 SUPERFAMILY SSF48498 82 191 3.78E-9 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS07705 e2f84d36f63ee1ea0ea9e8ed8e7f818a 356 PANTHER PTHR21091 113 356 9.6E-87 T 23-04-2016 CLI_RS07705 e2f84d36f63ee1ea0ea9e8ed8e7f818a 356 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 9 346 1.1E-72 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CLI_RS07705 e2f84d36f63ee1ea0ea9e8ed8e7f818a 356 PANTHER PTHR21091:SF9 113 356 9.6E-87 T 23-04-2016 CLI_RS07705 e2f84d36f63ee1ea0ea9e8ed8e7f818a 356 SUPERFAMILY SSF51726 7 348 4.71E-59 T 23-04-2016 CLI_RS07705 e2f84d36f63ee1ea0ea9e8ed8e7f818a 356 Gene3D G3DSA:3.20.20.210 4 347 1.5E-68 T 23-04-2016 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 Gene3D G3DSA:3.90.110.10 168 440 3.8E-88 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 SUPERFAMILY SSF56327 169 441 1.46E-69 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 138 170 - T 23-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 415 1.2E-45 T 23-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 Pfam PF02056 Family 4 glycosyl hydrolase 6 180 4.2E-48 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 3.5E-38 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 3.5E-38 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 3.5E-38 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 3.5E-38 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 3.5E-38 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 3.5E-38 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 PANTHER PTHR32092:SF7 1 441 2.3E-301 T 23-04-2016 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 PANTHER PTHR32092 1 441 2.3E-301 T 23-04-2016 CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 Gene3D G3DSA:3.40.50.720 1 163 2.7E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01555 8d38145528a9562b057cac8a70cb4848 441 SUPERFAMILY SSF51735 3 162 6.78E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS12780 f163f2f1b64ad42d334d844d245ccca3 206 TIGRFAM TIGR00235 udk: uridine kinase 4 204 3.5E-89 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 CLI_RS12780 f163f2f1b64ad42d334d844d245ccca3 206 PRINTS PR00988 Uridine kinase signature 171 184 1.28E-35 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 CLI_RS12780 f163f2f1b64ad42d334d844d245ccca3 206 PRINTS PR00988 Uridine kinase signature 4 21 1.28E-35 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 CLI_RS12780 f163f2f1b64ad42d334d844d245ccca3 206 PRINTS PR00988 Uridine kinase signature 34 45 1.28E-35 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 CLI_RS12780 f163f2f1b64ad42d334d844d245ccca3 206 PRINTS PR00988 Uridine kinase signature 149 160 1.28E-35 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 CLI_RS12780 f163f2f1b64ad42d334d844d245ccca3 206 PRINTS PR00988 Uridine kinase signature 79 94 1.28E-35 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 CLI_RS12780 f163f2f1b64ad42d334d844d245ccca3 206 PRINTS PR00988 Uridine kinase signature 135 145 1.28E-35 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 CLI_RS12780 f163f2f1b64ad42d334d844d245ccca3 206 Hamap MF_00551 Uridine kinase [udk]. 1 205 41.575 T 23-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 CLI_RS12780 f163f2f1b64ad42d334d844d245ccca3 206 SUPERFAMILY SSF52540 2 196 7.72E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12780 f163f2f1b64ad42d334d844d245ccca3 206 Gene3D G3DSA:3.40.50.300 3 205 9.6E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12780 f163f2f1b64ad42d334d844d245ccca3 206 PANTHER PTHR10285 2 204 1.1E-93 T 23-04-2016 CLI_RS12780 f163f2f1b64ad42d334d844d245ccca3 206 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 191 3.4E-44 T 23-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 CLI_RS08000 f1b07762b9f25b89bf3b06def89c18aa 196 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 4 195 34.714 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CLI_RS08000 f1b07762b9f25b89bf3b06def89c18aa 196 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 73 89 - T 23-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CLI_RS08000 f1b07762b9f25b89bf3b06def89c18aa 196 SUPERFAMILY SSF55620 3 192 7.34E-58 T 23-04-2016 CLI_RS08000 f1b07762b9f25b89bf3b06def89c18aa 196 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 8 184 5.2E-57 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CLI_RS08000 f1b07762b9f25b89bf3b06def89c18aa 196 Pfam PF01227 GTP cyclohydrolase I 8 193 3.0E-68 T 23-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CLI_RS08000 f1b07762b9f25b89bf3b06def89c18aa 196 Gene3D G3DSA:1.10.286.10 3 53 1.1E-20 T 23-04-2016 CLI_RS08000 f1b07762b9f25b89bf3b06def89c18aa 196 Gene3D G3DSA:3.30.1130.10 68 193 1.7E-46 T 23-04-2016 CLI_RS08000 f1b07762b9f25b89bf3b06def89c18aa 196 PANTHER PTHR11109 2 184 2.7E-82 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 PANTHER PTHR19211:SF65 1 514 0.0 T 23-04-2016 CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 SMART SM00382 28 237 2.4E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 SMART SM00382 348 513 5.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 Pfam PF12848 ABC transporter 229 313 1.4E-23 T 23-04-2016 IPR032781 ABC-transporter extension domain CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 Pfam PF00005 ABC transporter 20 190 3.4E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 Pfam PF00005 ABC transporter 340 468 9.2E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 PANTHER PTHR19211 1 514 0.0 T 23-04-2016 CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 Gene3D G3DSA:3.40.50.300 124 278 1.1E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 Gene3D G3DSA:3.40.50.300 326 508 4.7E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 Gene3D G3DSA:3.40.50.300 2 90 1.1E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 SUPERFAMILY SSF52540 306 511 2.59E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 SUPERFAMILY SSF52540 131 248 2.8E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 SUPERFAMILY SSF52540 3 94 2.8E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS03880 20e1a1f6baa7050931e3035471782b8d 517 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS01915 c1b1c59c30a288f5ee66cf225daa4b92 181 SUPERFAMILY SSF47413 3 67 1.13E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS01915 c1b1c59c30a288f5ee66cf225daa4b92 181 SUPERFAMILY SSF51182 56 181 1.19E-29 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS01915 c1b1c59c30a288f5ee66cf225daa4b92 181 Gene3D G3DSA:2.60.120.10 58 178 7.6E-25 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS01915 c1b1c59c30a288f5ee66cf225daa4b92 181 Pfam PF01381 Helix-turn-helix 9 63 8.2E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS01915 c1b1c59c30a288f5ee66cf225daa4b92 181 PANTHER PTHR10245 1 181 1.1E-70 T 23-04-2016 CLI_RS01915 c1b1c59c30a288f5ee66cf225daa4b92 181 PANTHER PTHR10245:SF53 1 181 1.1E-70 T 23-04-2016 CLI_RS01915 c1b1c59c30a288f5ee66cf225daa4b92 181 SMART SM00530 8 63 1.9E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS01915 c1b1c59c30a288f5ee66cf225daa4b92 181 Pfam PF07883 Cupin domain 108 175 8.5E-16 T 23-04-2016 IPR013096 Cupin 2, conserved barrel CLI_RS01915 c1b1c59c30a288f5ee66cf225daa4b92 181 Gene3D G3DSA:1.10.260.40 4 57 4.7E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 Gene3D G3DSA:3.40.50.300 141 283 5.4E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 Gene3D G3DSA:3.40.50.300 2 100 5.4E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 SMART SM00382 357 522 2.8E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 SMART SM00382 28 247 1.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 PANTHER PTHR19211 1 581 0.0 T 23-04-2016 CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 SUPERFAMILY SSF52540 4 247 4.05E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 PANTHER PTHR19211:SF64 1 581 0.0 T 23-04-2016 CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 SUPERFAMILY SSF52540 312 537 2.7E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 Pfam PF00005 ABC transporter 19 195 1.9E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 Pfam PF00005 ABC transporter 349 478 2.0E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 Pfam PF16326 ABC transporter C-terminal domain 575 637 5.9E-8 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 Gene3D G3DSA:3.40.50.300 334 572 7.8E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS16920 dafec44125f61e953d0577f40e9d54aa 640 Pfam PF12848 ABC transporter 234 313 3.9E-21 T 23-04-2016 IPR032781 ABC-transporter extension domain CLI_RS09815 34e28eeca884c71bb78fe7cec9d0d838 159 SUPERFAMILY SSF55040 10 154 1.1E-60 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CLI_RS09815 34e28eeca884c71bb78fe7cec9d0d838 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 151 3.3E-66 T 23-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 CLI_RS09815 34e28eeca884c71bb78fe7cec9d0d838 159 Gene3D G3DSA:3.30.70.640 2 157 8.2E-69 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CLI_RS09815 34e28eeca884c71bb78fe7cec9d0d838 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 1 157 36.565 T 23-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 CLI_RS09815 34e28eeca884c71bb78fe7cec9d0d838 159 Pfam PF01967 MoaC family 14 149 4.3E-56 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CLI_RS09815 34e28eeca884c71bb78fe7cec9d0d838 159 PANTHER PTHR22960 2 157 1.3E-100 T 23-04-2016 CLI_RS10270 505d19a3c98f9405c0c10861de304528 293 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 57 68 2.1E-13 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CLI_RS10270 505d19a3c98f9405c0c10861de304528 293 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 30 38 2.1E-13 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CLI_RS10270 505d19a3c98f9405c0c10861de304528 293 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 100 114 2.1E-13 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CLI_RS10270 505d19a3c98f9405c0c10861de304528 293 SUPERFAMILY SSF53474 12 291 4.59E-52 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS10270 505d19a3c98f9405c0c10861de304528 293 PIRSF PIRSF005539 1 293 1.0E-99 T 23-04-2016 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CLI_RS10270 505d19a3c98f9405c0c10861de304528 293 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 3 290 3.7E-89 T 23-04-2016 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CLI_RS10270 505d19a3c98f9405c0c10861de304528 293 Pfam PF00561 alpha/beta hydrolase fold 28 277 9.1E-30 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS10270 505d19a3c98f9405c0c10861de304528 293 Gene3D G3DSA:3.40.50.1820 2 292 1.3E-55 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS10270 505d19a3c98f9405c0c10861de304528 293 PANTHER PTHR10992 212 291 1.9E-37 T 23-04-2016 CLI_RS10270 505d19a3c98f9405c0c10861de304528 293 PANTHER PTHR10992 2 180 1.9E-37 T 23-04-2016 CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 PANTHER PTHR24423 46 328 1.3E-50 T 23-04-2016 CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 PANTHER PTHR24423 1 8 1.3E-50 T 23-04-2016 CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 329 2.0E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 310 2.0E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 260 274 2.0E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 278 288 2.0E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 SMART SM00387 223 332 1.0E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 SUPERFAMILY SSF55874 168 328 2.75E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 Gene3D G3DSA:3.30.565.10 164 328 2.6E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 SUPERFAMILY SSF47384 112 178 5.49E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 SMART SM00388 112 178 2.3E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 Pfam PF00512 His Kinase A (phospho-acceptor) domain 115 178 1.2E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 Gene3D G3DSA:1.10.287.130 114 163 2.9E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04665 a14da9eed9ccc34bc270878225456344 333 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 230 328 1.9E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03440 3acae536a0a707050ff612f5c3bf5ab6 145 PANTHER PTHR18964:SF122 15 140 4.7E-25 T 23-04-2016 CLI_RS03440 3acae536a0a707050ff612f5c3bf5ab6 145 Gene3D G3DSA:1.10.10.10 2 140 6.6E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03440 3acae536a0a707050ff612f5c3bf5ab6 145 PANTHER PTHR18964 15 140 4.7E-25 T 23-04-2016 CLI_RS03440 3acae536a0a707050ff612f5c3bf5ab6 145 SMART SM00347 24 124 2.7E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS03440 3acae536a0a707050ff612f5c3bf5ab6 145 SUPERFAMILY SSF46785 8 139 1.24E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03440 3acae536a0a707050ff612f5c3bf5ab6 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.1E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS03440 3acae536a0a707050ff612f5c3bf5ab6 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.1E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS03440 3acae536a0a707050ff612f5c3bf5ab6 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 8.1E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS03440 3acae536a0a707050ff612f5c3bf5ab6 145 Pfam PF12802 MarR family 38 88 1.8E-6 T 23-04-2016 CLI_RS07230 46e35fa323a72e40bd612a2dbfe47798 297 SMART SM00028 131 164 4.9 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS07230 46e35fa323a72e40bd612a2dbfe47798 297 SMART SM00028 82 115 36.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS07230 46e35fa323a72e40bd612a2dbfe47798 297 SMART SM00028 34 67 0.0017 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS07230 46e35fa323a72e40bd612a2dbfe47798 297 SUPERFAMILY SSF48452 30 176 8.54E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS07230 46e35fa323a72e40bd612a2dbfe47798 297 Gene3D G3DSA:1.25.40.10 30 183 3.7E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 5 330 41.816 T 23-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 PANTHER PTHR10055 2 332 2.4E-179 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 Pfam PF00579 tRNA synthetases class I (W and Y) 5 284 1.9E-78 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 Gene3D G3DSA:1.10.240.10 212 306 7.6E-16 T 23-04-2016 CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 SUPERFAMILY SSF52374 7 329 4.82E-97 T 23-04-2016 CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 PANTHER PTHR10055:SF10 2 332 2.4E-179 T 23-04-2016 CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 23 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 144 165 1.0E-28 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 68 87 1.0E-28 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 18 34 1.0E-28 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 197 207 1.0E-28 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 Gene3D G3DSA:3.40.50.620 3 211 4.0E-94 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS17045 cd308d7485ab2b472b04355cbc0ab2cf 332 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 329 3.9E-109 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 Pfam PF08245 Mur ligase middle domain 113 299 4.3E-47 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 456 1.1E-125 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 SUPERFAMILY SSF53623 107 317 1.44E-49 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 Gene3D G3DSA:3.40.1390.10 1 71 1.1E-21 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 Gene3D G3DSA:3.90.190.20 320 457 6.0E-43 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 PANTHER PTHR23135 13 457 3.0E-176 T 23-04-2016 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 Pfam PF01225 Mur ligase family, catalytic domain 26 103 1.6E-8 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 PANTHER PTHR23135:SF3 13 457 3.0E-176 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 SUPERFAMILY SSF63418 2 105 7.98E-22 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 397 2.4E-15 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 SUPERFAMILY SSF53244 321 456 1.15E-34 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 Gene3D G3DSA:3.40.1190.10 91 317 3.8E-63 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS07520 9c806b7d51b9aa15e35b77643c44d964 462 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 457 33.698 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 SUPERFAMILY SSF53335 12 280 8.37E-51 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 PANTHER PTHR18895 13 283 1.3E-96 T 23-04-2016 CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 186 192 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 Pfam PF05175 Methyltransferase small domain 104 196 4.3E-14 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 PANTHER PTHR18895:SF64 13 283 1.3E-96 T 23-04-2016 CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 Gene3D G3DSA:3.40.50.150 88 282 2.0E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 Gene3D G3DSA:1.10.8.10 4 85 1.3E-20 T 23-04-2016 CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 116 130 5.9E-6 T 23-04-2016 CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 183 195 5.9E-6 T 23-04-2016 CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 222 246 5.9E-6 T 23-04-2016 CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 282 42.751 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 278 1.1E-86 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CLI_RS00830 0f42f99c86faf1fa2ca334ff32168f71 283 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 281 7.4E-70 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CLI_RS17840 bed3a9722fdf0b8d9ee28df9a62963f6 209 PANTHER PTHR11229 5 208 6.2E-112 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17840 bed3a9722fdf0b8d9ee28df9a62963f6 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 23-04-2016 IPR019926 Ribosomal protein L3, conserved site CLI_RS17840 bed3a9722fdf0b8d9ee28df9a62963f6 209 Gene3D G3DSA:2.40.30.10 158 208 2.4E-14 T 23-04-2016 CLI_RS17840 bed3a9722fdf0b8d9ee28df9a62963f6 209 Gene3D G3DSA:2.40.30.10 3 33 2.4E-14 T 23-04-2016 CLI_RS17840 bed3a9722fdf0b8d9ee28df9a62963f6 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 207 38.706 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17840 bed3a9722fdf0b8d9ee28df9a62963f6 209 Pfam PF00297 Ribosomal protein L3 95 180 1.4E-17 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17840 bed3a9722fdf0b8d9ee28df9a62963f6 209 SUPERFAMILY SSF50447 2 208 5.03E-82 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS17840 bed3a9722fdf0b8d9ee28df9a62963f6 209 Gene3D G3DSA:4.10.960.10 77 157 2.0E-34 T 23-04-2016 CLI_RS17840 bed3a9722fdf0b8d9ee28df9a62963f6 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 5 204 4.6E-87 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS11120 cd6c3b3db73b127c4421ac1ba9ea3685 288 PANTHER PTHR13696:SF37 3 288 1.0E-92 T 23-04-2016 CLI_RS11120 cd6c3b3db73b127c4421ac1ba9ea3685 288 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 92 103 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS11120 cd6c3b3db73b127c4421ac1ba9ea3685 288 SUPERFAMILY SSF52540 4 102 8.63E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11120 cd6c3b3db73b127c4421ac1ba9ea3685 288 SUPERFAMILY SSF52540 139 286 8.63E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11120 cd6c3b3db73b127c4421ac1ba9ea3685 288 Gene3D G3DSA:3.30.70.20 54 100 2.3E-10 T 23-04-2016 CLI_RS11120 cd6c3b3db73b127c4421ac1ba9ea3685 288 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 256 1.4E-30 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS11120 cd6c3b3db73b127c4421ac1ba9ea3685 288 PANTHER PTHR13696 3 288 1.0E-92 T 23-04-2016 CLI_RS11120 cd6c3b3db73b127c4421ac1ba9ea3685 288 Gene3D G3DSA:3.40.50.300 101 284 3.3E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11120 cd6c3b3db73b127c4421ac1ba9ea3685 288 Gene3D G3DSA:3.40.50.300 4 52 3.3E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11120 cd6c3b3db73b127c4421ac1ba9ea3685 288 Pfam PF00037 4Fe-4S binding domain 61 83 4.7E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS18480 ea4b558a4c7e160754cb597168614c7b 399 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 136 2.0E-18 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS18480 ea4b558a4c7e160754cb597168614c7b 399 TIGRFAM TIGR03918 GTP_HydF: [FeFe] hydrogenase H-cluster maturation GTPase HydF 3 390 3.5E-163 T 23-04-2016 IPR023873 [FeFe]-hydrogenase H-cluster maturation GTPase HydF CLI_RS18480 ea4b558a4c7e160754cb597168614c7b 399 PANTHER PTHR11649:SF59 4 319 1.0E-68 T 23-04-2016 CLI_RS18480 ea4b558a4c7e160754cb597168614c7b 399 PANTHER PTHR11649 4 319 1.0E-68 T 23-04-2016 CLI_RS18480 ea4b558a4c7e160754cb597168614c7b 399 SUPERFAMILY SSF52540 7 167 1.16E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18480 ea4b558a4c7e160754cb597168614c7b 399 Pfam PF01926 50S ribosome-binding GTPase 12 126 2.1E-18 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS18480 ea4b558a4c7e160754cb597168614c7b 399 Gene3D G3DSA:3.40.50.300 5 168 1.0E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04725 65bc00d30d137d5c194dd66e50b5e370 202 Gene3D G3DSA:3.20.80.10 56 202 3.3E-28 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS04725 65bc00d30d137d5c194dd66e50b5e370 202 SMART SM00871 57 202 4.5E-5 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding CLI_RS04725 65bc00d30d137d5c194dd66e50b5e370 202 SUPERFAMILY SSF55136 61 201 1.43E-18 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS16760 3e3348ec8d7c8c57aace663c78fbb249 223 SUPERFAMILY SSF53955 97 221 8.3E-43 T 23-04-2016 IPR023346 Lysozyme-like domain CLI_RS16760 3e3348ec8d7c8c57aace663c78fbb249 223 PANTHER PTHR21666 81 221 4.3E-39 T 23-04-2016 CLI_RS16760 3e3348ec8d7c8c57aace663c78fbb249 223 Gene3D G3DSA:1.10.530.10 97 221 1.4E-44 T 23-04-2016 CLI_RS16760 3e3348ec8d7c8c57aace663c78fbb249 223 Pfam PF01464 Transglycosylase SLT domain 100 193 5.7E-28 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 CLI_RS16760 3e3348ec8d7c8c57aace663c78fbb249 223 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 117 145 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 Pfam PF04545 Sigma-70, region 4 296 349 2.8E-20 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 Pfam PF04542 Sigma-70 region 2 128 197 2.9E-22 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 SUPERFAMILY SSF88946 89 198 8.77E-54 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 13 361 34.559 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 Pfam PF04539 Sigma-70 region 3 207 283 2.6E-31 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 Pfam PF03979 Sigma-70 factor, region 1.1 15 77 3.2E-16 T 23-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 321 347 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 Gene3D G3DSA:1.10.10.10 291 361 1.7E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 SUPERFAMILY SSF88659 258 360 1.4E-30 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 Pfam PF00140 Sigma-70 factor, region 1.2 90 121 7.6E-18 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 SUPERFAMILY SSF88659 201 275 4.58E-23 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 PRINTS PR00046 Major sigma-70 factor signature 176 184 2.1E-32 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 PRINTS PR00046 Major sigma-70 factor signature 321 336 2.1E-32 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 PRINTS PR00046 Major sigma-70 factor signature 152 165 2.1E-32 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 PRINTS PR00046 Major sigma-70 factor signature 336 347 2.1E-32 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 PRINTS PR00046 Major sigma-70 factor signature 300 312 2.1E-32 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 126 349 6.5E-40 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 Gene3D G3DSA:1.10.10.10 201 252 3.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 PANTHER PTHR30603 1 361 5.4E-224 T 23-04-2016 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 124 360 7.3E-124 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 152 165 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 Gene3D G3DSA:1.10.601.10 2 197 1.4E-77 T 23-04-2016 CLI_RS14615 082456d000224d4d76d6e10bbcaacf80 361 PANTHER PTHR30603:SF0 1 361 5.4E-224 T 23-04-2016 CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 PANTHER PTHR24423 1 127 7.4E-190 T 23-04-2016 CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 PANTHER PTHR24423 189 473 7.4E-190 T 23-04-2016 CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 PANTHER PTHR24423:SF470 1 127 7.4E-190 T 23-04-2016 CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 PANTHER PTHR24423:SF470 189 473 7.4E-190 T 23-04-2016 CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 254 316 7.4E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 SUPERFAMILY SSF47384 238 321 2.55E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 471 7.3E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 SMART SM00387 367 473 3.5E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 417 7.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 473 7.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 431 7.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 7.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 SUPERFAMILY SSF55874 311 473 1.7E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 Gene3D G3DSA:3.30.565.10 327 471 1.6E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 SMART SM00388 253 321 1.1E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05105 61e30a79c11b46b46efc7828b94f1133 473 Gene3D G3DSA:1.10.287.130 247 312 4.3E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS16955 0c2cb2a911c6e58959199ca135b0c54e 207 Gene3D G3DSA:3.30.1330.70 4 125 9.6E-20 T 23-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CLI_RS16955 0c2cb2a911c6e58959199ca135b0c54e 207 SUPERFAMILY SSF103084 12 126 6.15E-20 T 23-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CLI_RS16955 0c2cb2a911c6e58959199ca135b0c54e 207 Pfam PF05866 Endodeoxyribonuclease RusA 11 124 2.5E-17 T 23-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 Gene3D G3DSA:1.10.8.60 379 449 1.7E-19 T 23-04-2016 CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 Gene3D G3DSA:1.10.10.60 467 513 2.6E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 Gene3D G3DSA:3.40.50.300 202 378 3.4E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 SUPERFAMILY SSF52540 204 447 3.82E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 SUPERFAMILY SSF55785 77 180 3.56E-8 T 23-04-2016 IPR000014 PAS domain CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 SUPERFAMILY SSF46689 465 513 1.04E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 468 513 1.0E-10 T 23-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 419 428 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 Pfam PF00158 Sigma-54 interaction domain 205 373 1.2E-67 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 Gene3D G3DSA:3.30.70.260 2 68 5.8E-7 T 23-04-2016 CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 PANTHER PTHR32071 155 513 4.7E-169 T 23-04-2016 CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 SUPERFAMILY SSF55021 3 67 2.78E-5 T 23-04-2016 CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 Gene3D G3DSA:3.30.450.20 78 193 1.1E-10 T 23-04-2016 CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 SMART SM00382 225 369 4.8E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 Pfam PF13426 PAS domain 90 185 1.3E-6 T 23-04-2016 IPR000014 PAS domain CLI_RS00160 38d8b41367c07b4e3160deff0d499420 516 PANTHER PTHR32071:SF26 155 513 4.7E-169 T 23-04-2016 CLI_RS02925 988f95520b12f919277a7b0130b79cc4 411 PANTHER PTHR10804:SF17 1 410 4.0E-130 T 23-04-2016 CLI_RS02925 988f95520b12f919277a7b0130b79cc4 411 SUPERFAMILY SSF55920 172 410 7.46E-71 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS02925 988f95520b12f919277a7b0130b79cc4 411 PANTHER PTHR10804 1 410 4.0E-130 T 23-04-2016 CLI_RS02925 988f95520b12f919277a7b0130b79cc4 411 SUPERFAMILY SSF53092 2 171 2.09E-34 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLI_RS02925 988f95520b12f919277a7b0130b79cc4 411 Pfam PF00557 Metallopeptidase family M24 177 389 3.9E-59 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS02925 988f95520b12f919277a7b0130b79cc4 411 SMART SM01011 1 135 2.9E-35 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CLI_RS02925 988f95520b12f919277a7b0130b79cc4 411 Gene3D G3DSA:3.40.350.10 2 175 7.3E-39 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLI_RS02925 988f95520b12f919277a7b0130b79cc4 411 Gene3D G3DSA:3.90.230.10 176 411 2.5E-75 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS02925 988f95520b12f919277a7b0130b79cc4 411 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 121 2.5E-27 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CLI_RS16165 9443f5e67f387338efbb44aef3fcd85f 409 PANTHER PTHR11851 7 403 4.8E-86 T 23-04-2016 CLI_RS16165 9443f5e67f387338efbb44aef3fcd85f 409 Gene3D G3DSA:3.30.830.10 5 209 1.5E-54 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CLI_RS16165 9443f5e67f387338efbb44aef3fcd85f 409 Pfam PF05193 Peptidase M16 inactive domain 166 328 5.4E-30 T 23-04-2016 IPR007863 Peptidase M16, C-terminal CLI_RS16165 9443f5e67f387338efbb44aef3fcd85f 409 Gene3D G3DSA:3.30.830.10 233 405 1.3E-25 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CLI_RS16165 9443f5e67f387338efbb44aef3fcd85f 409 SUPERFAMILY SSF63411 230 405 1.17E-28 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLI_RS16165 9443f5e67f387338efbb44aef3fcd85f 409 Pfam PF00675 Insulinase (Peptidase family M16) 19 159 1.7E-33 T 23-04-2016 IPR011765 Peptidase M16, N-terminal CLI_RS16165 9443f5e67f387338efbb44aef3fcd85f 409 SUPERFAMILY SSF63411 3 208 7.33E-56 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLI_RS16165 9443f5e67f387338efbb44aef3fcd85f 409 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 34 57 - T 23-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 PRINTS PR00151 Porphobilinogen deaminase signature 41 61 6.2E-40 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 PRINTS PR00151 Porphobilinogen deaminase signature 139 156 6.2E-40 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 PRINTS PR00151 Porphobilinogen deaminase signature 72 91 6.2E-40 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 PRINTS PR00151 Porphobilinogen deaminase signature 120 137 6.2E-40 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 PRINTS PR00151 Porphobilinogen deaminase signature 225 242 6.2E-40 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 Gene3D G3DSA:3.40.190.10 3 105 7.4E-40 T 23-04-2016 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 SUPERFAMILY SSF54782 215 289 5.1E-18 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 SUPERFAMILY SSF53850 3 205 1.05E-72 T 23-04-2016 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 289 1.4E-100 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 Gene3D G3DSA:3.40.190.10 106 195 7.0E-38 T 23-04-2016 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 221 288 2.6E-14 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 PIRSF PIRSF001438 1 290 1.1E-104 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 206 5.0E-71 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 2 290 34.18 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 Gene3D G3DSA:3.30.160.40 217 289 1.0E-15 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04865 d294f53a76729a87c6e447d9d81e1871 290 PANTHER PTHR11557 3 290 2.2E-124 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS15255 bd98edf3aaacab4554aab97846ae826a 287 Pfam PF07549 SecD/SecF GG Motif 25 46 3.2E-7 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CLI_RS15255 bd98edf3aaacab4554aab97846ae826a 287 Pfam PF02355 Protein export membrane protein 103 279 1.5E-65 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLI_RS15255 bd98edf3aaacab4554aab97846ae826a 287 PRINTS PR01755 Bacterial translocase SecF protein signature 187 205 1.5E-31 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLI_RS15255 bd98edf3aaacab4554aab97846ae826a 287 PRINTS PR01755 Bacterial translocase SecF protein signature 219 234 1.5E-31 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLI_RS15255 bd98edf3aaacab4554aab97846ae826a 287 PRINTS PR01755 Bacterial translocase SecF protein signature 139 153 1.5E-31 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLI_RS15255 bd98edf3aaacab4554aab97846ae826a 287 PRINTS PR01755 Bacterial translocase SecF protein signature 29 44 1.5E-31 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLI_RS15255 bd98edf3aaacab4554aab97846ae826a 287 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 2 281 27.475 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CLI_RS15255 bd98edf3aaacab4554aab97846ae826a 287 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 30 270 1.7E-75 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CLI_RS15255 bd98edf3aaacab4554aab97846ae826a 287 PANTHER PTHR30081 1 277 6.8E-79 T 23-04-2016 CLI_RS15255 bd98edf3aaacab4554aab97846ae826a 287 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 53 267 2.1E-52 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLI_RS15255 bd98edf3aaacab4554aab97846ae826a 287 SUPERFAMILY SSF82866 79 280 1.18E-36 T 23-04-2016 CLI_RS15255 bd98edf3aaacab4554aab97846ae826a 287 Gene3D G3DSA:1.20.1640.10 114 280 1.7E-23 T 23-04-2016 CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 Hamap MF_00335 Ribonuclease Y [rny]. 5 513 25.606 T 23-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 SMART SM00471 325 431 1.7E-12 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 SUPERFAMILY SSF54791 201 297 6.84E-18 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 TIGRFAM TIGR00277 HDIG: HDIG domain 325 402 8.2E-22 T 23-04-2016 IPR006675 HDIG domain CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 Gene3D G3DSA:3.30.1370.10 213 291 1.6E-8 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 PANTHER PTHR12826 177 512 6.6E-146 T 23-04-2016 CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 SMART SM00322 201 268 3.2E-8 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 SUPERFAMILY SSF109604 310 466 2.24E-31 T 23-04-2016 CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 Pfam PF12072 Domain of unknown function (DUF3552) 6 198 5.2E-67 T 23-04-2016 IPR022711 Ribonuclease Y, N-terminal CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 Gene3D G3DSA:1.10.3210.10 309 489 5.2E-43 T 23-04-2016 IPR006674 HD domain CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 Pfam PF00013 KH domain 206 263 5.0E-7 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 7 513 2.1E-237 T 23-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 CLI_RS11985 20e825accba2c83d6425fa2b63ca0fc5 513 Pfam PF01966 HD domain 330 421 4.8E-19 T 23-04-2016 IPR006674 HD domain CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 326 382 5.2E-16 T 23-04-2016 CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 SUPERFAMILY SSF55785 220 296 2.93E-7 T 23-04-2016 IPR000014 PAS domain CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 Gene3D G3DSA:3.30.450.20 36 168 1.2E-39 T 23-04-2016 CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 SUPERFAMILY SSF103190 37 167 4.71E-32 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 PANTHER PTHR24423:SF375 193 532 5.5E-176 T 23-04-2016 CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 PANTHER PTHR24423:SF375 11 160 5.5E-176 T 23-04-2016 CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 SUPERFAMILY SSF55874 414 528 1.83E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 Gene3D G3DSA:1.10.287.130 325 383 5.9E-27 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 Gene3D G3DSA:3.30.565.10 397 527 1.1E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 PANTHER PTHR24423 193 532 5.5E-176 T 23-04-2016 CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 PANTHER PTHR24423 11 160 5.5E-176 T 23-04-2016 CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 428 515 1.4E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 Pfam PF17203 Single cache domain 3 37 167 6.5E-24 T 23-04-2016 IPR033463 Single cache domain 3 CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 SMART SM00387 424 530 4.4E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 SUPERFAMILY SSF55890 327 420 5.1E-18 T 23-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CLI_RS01450 60efbd3edd3f223c52022848fc4b4b2e 540 Gene3D G3DSA:3.30.450.20 220 324 5.1E-9 T 23-04-2016 CLI_RS17385 3d6dfd53ea7cfff0250077e323bc405d 401 SMART SM00228 111 182 6.8E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS17385 3d6dfd53ea7cfff0250077e323bc405d 401 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 62 379 6.0E-109 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CLI_RS17385 3d6dfd53ea7cfff0250077e323bc405d 401 Gene3D G3DSA:3.90.226.10 192 400 8.8E-69 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS17385 3d6dfd53ea7cfff0250077e323bc405d 401 SUPERFAMILY SSF50156 102 182 4.3E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS17385 3d6dfd53ea7cfff0250077e323bc405d 401 SMART SM00245 183 371 4.1E-70 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 CLI_RS17385 3d6dfd53ea7cfff0250077e323bc405d 401 Pfam PF03572 Peptidase family S41 208 370 2.9E-51 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 CLI_RS17385 3d6dfd53ea7cfff0250077e323bc405d 401 SUPERFAMILY SSF52096 47 129 2.15E-76 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS17385 3d6dfd53ea7cfff0250077e323bc405d 401 SUPERFAMILY SSF52096 202 388 2.15E-76 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS17385 3d6dfd53ea7cfff0250077e323bc405d 401 PANTHER PTHR32060 56 401 1.9E-113 T 23-04-2016 CLI_RS17385 3d6dfd53ea7cfff0250077e323bc405d 401 Gene3D G3DSA:3.30.750.44 58 116 4.0E-13 T 23-04-2016 CLI_RS17385 3d6dfd53ea7cfff0250077e323bc405d 401 Gene3D G3DSA:2.30.42.10 117 191 9.4E-25 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS17385 3d6dfd53ea7cfff0250077e323bc405d 401 Pfam PF13180 PDZ domain 113 183 2.2E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS15960 4fc1c08e6f33383f608e158b5c0a9c43 109 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 3 95 5.5E-7 T 23-04-2016 IPR006450 Phage protein of unkonwn function CLI_RS15960 4fc1c08e6f33383f608e158b5c0a9c43 109 Pfam PF05135 Phage gp6-like head-tail connector protein 1 91 4.6E-7 T 23-04-2016 IPR021146 Phage gp6-like head-tail connector protein CLI_RS05530 8cfc3fb749d930c89834065a1b291e95 571 SMART SM00382 358 550 2.9E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS05530 8cfc3fb749d930c89834065a1b291e95 571 SUPERFAMILY SSF52540 328 569 2.33E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05530 8cfc3fb749d930c89834065a1b291e95 571 SUPERFAMILY SSF90123 15 328 4.19E-46 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS05530 8cfc3fb749d930c89834065a1b291e95 571 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS05530 8cfc3fb749d930c89834065a1b291e95 571 PANTHER PTHR24222 1 569 0.0 T 23-04-2016 CLI_RS05530 8cfc3fb749d930c89834065a1b291e95 571 PANTHER PTHR24222:SF29 1 569 0.0 T 23-04-2016 CLI_RS05530 8cfc3fb749d930c89834065a1b291e95 571 Gene3D G3DSA:1.20.1560.10 18 325 4.4E-36 T 23-04-2016 CLI_RS05530 8cfc3fb749d930c89834065a1b291e95 571 Pfam PF00005 ABC transporter 349 498 4.0E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS05530 8cfc3fb749d930c89834065a1b291e95 571 Gene3D G3DSA:3.40.50.300 334 563 5.8E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05530 8cfc3fb749d930c89834065a1b291e95 571 Pfam PF00664 ABC transporter transmembrane region 56 287 1.2E-15 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 PANTHER PTHR19376 3 1052 0.0 T 23-04-2016 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 PANTHER PTHR19376 1093 1153 0.0 T 23-04-2016 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 PANTHER PTHR19376:SF32 3 1052 0.0 T 23-04-2016 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 PANTHER PTHR19376:SF32 1093 1153 0.0 T 23-04-2016 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 Gene3D G3DSA:2.40.50.100 948 1002 1.8E-14 T 23-04-2016 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 3 573 32.936 T 23-04-2016 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 Pfam PF04983 RNA polymerase Rpb1, domain 3 479 640 1.3E-26 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 SMART SM00663 225 504 3.1E-183 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1157 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 Gene3D G3DSA:2.40.40.20 407 478 4.3E-37 T 23-04-2016 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 Gene3D G3DSA:2.40.40.20 339 366 4.3E-37 T 23-04-2016 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 SUPERFAMILY SSF64484 5 1158 0.0 T 23-04-2016 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 5 1166 10.457 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 Pfam PF04998 RNA polymerase Rpb1, domain 5 747 1104 3.7E-68 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 Pfam PF00623 RNA polymerase Rpb1, domain 2 334 475 1.6E-37 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 Pfam PF05000 RNA polymerase Rpb1, domain 4 669 734 1.8E-15 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17875 ee00cde0e1d61b8d046cc79b7f5b4b40 1178 Pfam PF04997 RNA polymerase Rpb1, domain 1 5 332 7.0E-92 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS11095 3cd9c6a622dbe00b51c8fa0c5799912d 357 Gene3D G3DSA:3.40.50.720 175 295 1.8E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS11095 3cd9c6a622dbe00b51c8fa0c5799912d 357 Pfam PF00107 Zinc-binding dehydrogenase 183 309 4.5E-27 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLI_RS11095 3cd9c6a622dbe00b51c8fa0c5799912d 357 PANTHER PTHR11695 12 356 8.3E-135 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CLI_RS11095 3cd9c6a622dbe00b51c8fa0c5799912d 357 SMART SM00829 10 350 1.2E-6 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CLI_RS11095 3cd9c6a622dbe00b51c8fa0c5799912d 357 SUPERFAMILY SSF50129 1 182 1.98E-55 T 23-04-2016 IPR011032 GroES-like CLI_RS11095 3cd9c6a622dbe00b51c8fa0c5799912d 357 PANTHER PTHR11695:SF38 12 356 8.3E-135 T 23-04-2016 CLI_RS11095 3cd9c6a622dbe00b51c8fa0c5799912d 357 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 143 3.6E-35 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLI_RS11095 3cd9c6a622dbe00b51c8fa0c5799912d 357 Gene3D G3DSA:3.90.180.10 1 174 4.4E-60 T 23-04-2016 IPR011032 GroES-like CLI_RS11095 3cd9c6a622dbe00b51c8fa0c5799912d 357 SUPERFAMILY SSF51735 147 315 3.14E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS11095 3cd9c6a622dbe00b51c8fa0c5799912d 357 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 1.8E-18 T 23-04-2016 CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 SUPERFAMILY SSF54909 65 137 2.15E-13 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 Pfam PF01037 Lrp/AsnC ligand binding domain 69 135 2.4E-12 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.5E-17 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.5E-17 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.5E-17 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 Gene3D G3DSA:1.10.10.10 1 54 3.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 SUPERFAMILY SSF46785 2 62 4.23E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 SMART SM00344 3 109 6.5E-39 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 PANTHER PTHR30154 1 149 5.6E-86 T 23-04-2016 CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 Gene3D G3DSA:3.30.70.920 56 131 1.1E-13 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLI_RS04450 23931eaa74c0b7d5a2776369e35d1196 149 PANTHER PTHR30154:SF25 1 149 5.6E-86 T 23-04-2016 CLI_RS00205 445fdabd9e4819641d300fa07447df3c 230 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 220 7.5E-64 T 23-04-2016 IPR005224 Sugar fermentation stimulation protein CLI_RS00205 445fdabd9e4819641d300fa07447df3c 230 Pfam PF03749 Sugar fermentation stimulation protein 13 221 4.5E-76 T 23-04-2016 IPR005224 Sugar fermentation stimulation protein CLI_RS00205 445fdabd9e4819641d300fa07447df3c 230 PANTHER PTHR30545:SF2 3 230 1.6E-81 T 23-04-2016 CLI_RS00205 445fdabd9e4819641d300fa07447df3c 230 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 230 51.464 T 23-04-2016 IPR005224 Sugar fermentation stimulation protein CLI_RS00205 445fdabd9e4819641d300fa07447df3c 230 PANTHER PTHR30545 3 230 1.6E-81 T 23-04-2016 CLI_RS15785 0d362e6a853985d01f9bd7f219a39cd1 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 427 9.3E-118 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CLI_RS15785 0d362e6a853985d01f9bd7f219a39cd1 429 SUPERFAMILY SSF53244 299 428 5.19E-28 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS15785 0d362e6a853985d01f9bd7f219a39cd1 429 PIRSF PIRSF001563 1 429 3.2E-145 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CLI_RS15785 0d362e6a853985d01f9bd7f219a39cd1 429 Gene3D G3DSA:3.90.190.20 298 428 5.1E-35 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS15785 0d362e6a853985d01f9bd7f219a39cd1 429 Gene3D G3DSA:3.40.1190.10 1 297 6.7E-95 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS15785 0d362e6a853985d01f9bd7f219a39cd1 429 Pfam PF08245 Mur ligase middle domain 44 271 2.2E-20 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS15785 0d362e6a853985d01f9bd7f219a39cd1 429 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 140 155 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 CLI_RS15785 0d362e6a853985d01f9bd7f219a39cd1 429 Pfam PF02875 Mur ligase family, glutamate ligase domain 296 377 3.6E-10 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS15785 0d362e6a853985d01f9bd7f219a39cd1 429 PANTHER PTHR11136 1 429 5.3E-142 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CLI_RS15785 0d362e6a853985d01f9bd7f219a39cd1 429 PANTHER PTHR11136:SF0 1 429 5.3E-142 T 23-04-2016 CLI_RS15785 0d362e6a853985d01f9bd7f219a39cd1 429 SUPERFAMILY SSF53623 1 296 1.12E-88 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS17555 679e428c023555af06d2af82696da412 69 Gene3D G3DSA:3.30.70.20 4 68 2.8E-13 T 23-04-2016 CLI_RS17555 679e428c023555af06d2af82696da412 69 Pfam PF12838 4Fe-4S dicluster domain 10 61 4.0E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS17555 679e428c023555af06d2af82696da412 69 PANTHER PTHR24960:SF52 1 68 2.7E-38 T 23-04-2016 CLI_RS17555 679e428c023555af06d2af82696da412 69 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 11 22 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS17555 679e428c023555af06d2af82696da412 69 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 50 61 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS17555 679e428c023555af06d2af82696da412 69 SUPERFAMILY SSF54862 3 68 2.71E-14 T 23-04-2016 CLI_RS17555 679e428c023555af06d2af82696da412 69 PANTHER PTHR24960 1 68 2.7E-38 T 23-04-2016 CLI_RS12095 9bfc0794bcb84244eccba02219b2287f 336 SMART SM00228 102 174 9.7E-5 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS12095 9bfc0794bcb84244eccba02219b2287f 336 Pfam PF02163 Peptidase family M50 6 321 3.4E-78 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 CLI_RS12095 9bfc0794bcb84244eccba02219b2287f 336 SUPERFAMILY SSF50156 79 182 2.76E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS12095 9bfc0794bcb84244eccba02219b2287f 336 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 117 331 3.5E-50 T 23-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CLI_RS12095 9bfc0794bcb84244eccba02219b2287f 336 PANTHER PTHR22939:SF78 119 335 5.6E-72 T 23-04-2016 CLI_RS12095 9bfc0794bcb84244eccba02219b2287f 336 PANTHER PTHR22939 119 335 5.6E-72 T 23-04-2016 CLI_RS12095 9bfc0794bcb84244eccba02219b2287f 336 Pfam PF13180 PDZ domain 119 181 4.3E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS12095 9bfc0794bcb84244eccba02219b2287f 336 Gene3D G3DSA:2.30.42.10 86 183 1.3E-22 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 Gene3D G3DSA:1.20.200.10 102 449 1.7E-116 T 23-04-2016 CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 PANTHER PTHR11444 3 465 1.5E-208 T 23-04-2016 IPR000362 Fumarate lyase family CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 4.4E-9 T 23-04-2016 IPR000362 Fumarate lyase family CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 4.4E-9 T 23-04-2016 IPR000362 Fumarate lyase family CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 4.4E-9 T 23-04-2016 IPR000362 Fumarate lyase family CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 Pfam PF00206 Lyase 34 303 7.4E-22 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 SUPERFAMILY SSF48557 8 454 1.05E-99 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 PANTHER PTHR11444:SF2 3 465 1.5E-208 T 23-04-2016 CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 SMART SM00998 369 453 4.9E-28 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 Pfam PF10397 Adenylosuccinate lyase C-terminus 370 449 1.9E-18 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 9 451 7.0E-119 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CLI_RS11945 e941365b8f834bc632248c0cc5add385 476 Gene3D G3DSA:1.10.275.10 11 101 1.7E-31 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 Gene3D G3DSA:1.10.10.400 225 311 2.8E-26 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 SUPERFAMILY SSF50249 609 693 1.48E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 Gene3D G3DSA:3.30.230.70 3 223 2.7E-72 T 23-04-2016 IPR027408 PNPase/RNase PH domain CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 Gene3D G3DSA:3.30.230.70 312 542 6.9E-79 T 23-04-2016 IPR027408 PNPase/RNase PH domain CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 SUPERFAMILY SSF54211 4 142 1.82E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 SMART SM00316 620 690 3.6E-23 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 SUPERFAMILY SSF55666 136 228 2.09E-25 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 Pfam PF03725 3' exoribonuclease family, domain 2 145 208 2.3E-13 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 SUPERFAMILY SSF55666 447 548 7.2E-25 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 SUPERFAMILY SSF54211 290 486 1.16E-46 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 Pfam PF00013 KH domain 555 613 3.7E-7 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 Gene3D G3DSA:3.30.1370.10 550 620 1.8E-20 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 693 29.011 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 PANTHER PTHR11252 3 701 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 SMART SM00322 551 617 8.0E-10 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 PANTHER PTHR11252:SF0 3 701 0.0 T 23-04-2016 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 239 316 7.0E-18 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 Gene3D G3DSA:2.40.50.140 621 692 2.8E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 691 5.5E-290 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 Pfam PF00575 S1 RNA binding domain 621 690 8.9E-18 T 23-04-2016 IPR003029 S1 domain GO:0003676 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 1.4E-14 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 Pfam PF01138 3' exoribonuclease family, domain 1 320 453 8.8E-19 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 SUPERFAMILY SSF54791 551 629 2.6E-15 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 PIRSF PIRSF005499 1 702 3.5E-277 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLI_RS12030 3435e52fc980223d2f14b8b77e137e70 702 SUPERFAMILY SSF46915 237 317 1.05E-18 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLI_RS11225 a1b0c64f8188535aaed7ffacb5934ecf 356 SUPERFAMILY SSF51726 6 348 1.92E-49 T 23-04-2016 CLI_RS11225 a1b0c64f8188535aaed7ffacb5934ecf 356 Gene3D G3DSA:3.20.20.210 2 346 1.2E-60 T 23-04-2016 CLI_RS11225 a1b0c64f8188535aaed7ffacb5934ecf 356 PANTHER PTHR21091 92 348 2.4E-133 T 23-04-2016 CLI_RS11225 a1b0c64f8188535aaed7ffacb5934ecf 356 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 8 345 3.1E-68 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CLI_RS11225 a1b0c64f8188535aaed7ffacb5934ecf 356 PANTHER PTHR21091:SF9 92 348 2.4E-133 T 23-04-2016 CLI_RS03610 e56c68a08f1198a953113d80c6cd6bce 329 Gene3D G3DSA:3.40.50.1980 182 327 7.5E-22 T 23-04-2016 CLI_RS03610 e56c68a08f1198a953113d80c6cd6bce 329 Gene3D G3DSA:3.40.50.1980 49 181 4.4E-27 T 23-04-2016 CLI_RS03610 e56c68a08f1198a953113d80c6cd6bce 329 PANTHER PTHR30532 1 329 8.0E-88 T 23-04-2016 CLI_RS03610 e56c68a08f1198a953113d80c6cd6bce 329 SUPERFAMILY SSF53807 51 323 9.42E-50 T 23-04-2016 CLI_RS03610 e56c68a08f1198a953113d80c6cd6bce 329 PANTHER PTHR30532:SF1 1 329 8.0E-88 T 23-04-2016 CLI_RS03610 e56c68a08f1198a953113d80c6cd6bce 329 Pfam PF01497 Periplasmic binding protein 70 306 1.0E-31 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 Gene3D G3DSA:3.40.1170.10 3 116 5.3E-48 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 Pfam PF05190 MutS family domain IV 426 517 5.0E-31 T 23-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 SUPERFAMILY SSF52540 566 801 4.87E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 Gene3D G3DSA:3.40.50.300 566 800 8.4E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 SUPERFAMILY SSF48334 264 565 7.59E-92 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 PANTHER PTHR11361:SF86 3 883 0.0 T 23-04-2016 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 Pfam PF01624 MutS domain I 4 115 2.0E-43 T 23-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 Pfam PF00488 MutS domain V 611 800 1.9E-87 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 PANTHER PTHR11361 3 883 0.0 T 23-04-2016 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 SUPERFAMILY SSF55271 2 111 5.75E-41 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 Gene3D G3DSA:1.10.1420.10 260 466 1.8E-55 T 23-04-2016 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 3 817 7.7E-303 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 SMART SM00534 608 797 7.1E-124 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 SMART SM00533 281 590 8.2E-106 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 3 920 25.341 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 SUPERFAMILY SSF53150 113 277 9.94E-31 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 Gene3D G3DSA:3.30.420.110 122 252 4.2E-20 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 PIRSF PIRSF037677 1 846 8.3E-179 T 23-04-2016 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 Pfam PF05192 MutS domain III 266 558 2.8E-44 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 Pfam PF05188 MutS domain II 124 249 6.7E-12 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CLI_RS08775 9a8724093a63659d2555dcb9b814951c 932 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 689 705 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS17245 45750fbfcbcab01be56ab35d0d3d3ee6 284 PANTHER PTHR14194 4 282 4.6E-57 T 23-04-2016 CLI_RS17245 45750fbfcbcab01be56ab35d0d3d3ee6 284 Pfam PF05368 NmrA-like family 4 226 1.1E-17 T 23-04-2016 IPR008030 NmrA-like domain CLI_RS17245 45750fbfcbcab01be56ab35d0d3d3ee6 284 PANTHER PTHR14194:SF46 4 282 4.6E-57 T 23-04-2016 CLI_RS17245 45750fbfcbcab01be56ab35d0d3d3ee6 284 Gene3D G3DSA:3.40.50.720 4 223 3.8E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS17245 45750fbfcbcab01be56ab35d0d3d3ee6 284 SUPERFAMILY SSF51735 4 251 4.45E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 Gene3D G3DSA:1.10.1060.10 3 141 1.1E-46 T 23-04-2016 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 SUPERFAMILY SSF51971 138 391 8.24E-69 T 23-04-2016 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 PANTHER PTHR11938 3 459 4.9E-167 T 23-04-2016 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 PRINTS PR00419 Adrenodoxin reductase family signature 282 296 6.4E-19 T 23-04-2016 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 PRINTS PR00419 Adrenodoxin reductase family signature 140 162 6.4E-19 T 23-04-2016 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 PRINTS PR00419 Adrenodoxin reductase family signature 206 216 6.4E-19 T 23-04-2016 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 PRINTS PR00419 Adrenodoxin reductase family signature 163 176 6.4E-19 T 23-04-2016 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 SUPERFAMILY SSF51971 367 459 3.18E-6 T 23-04-2016 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 14 458 4.9E-179 T 23-04-2016 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 139 447 1.1E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 Gene3D G3DSA:3.50.50.60 380 459 2.7E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 Gene3D G3DSA:3.50.50.60 232 379 5.5E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 PANTHER PTHR11938:SF108 3 459 4.9E-167 T 23-04-2016 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 SUPERFAMILY SSF46548 9 149 1.15E-34 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 17 127 7.2E-45 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II CLI_RS08435 7aaeff06b2ce4119e2c2004f1df98014 460 Gene3D G3DSA:3.40.50.720 142 231 2.2E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS06235 bb5bc579028c7e5c360bb1e105ac94cf 481 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 359 367 - T 23-04-2016 IPR018120 Glycoside hydrolase family 1, active site CLI_RS06235 bb5bc579028c7e5c360bb1e105ac94cf 481 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 23-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CLI_RS06235 bb5bc579028c7e5c360bb1e105ac94cf 481 PANTHER PTHR10353:SF35 4 468 3.5E-304 T 23-04-2016 CLI_RS06235 bb5bc579028c7e5c360bb1e105ac94cf 481 PANTHER PTHR10353 4 468 3.5E-304 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS06235 bb5bc579028c7e5c360bb1e105ac94cf 481 Pfam PF00232 Glycosyl hydrolase family 1 2 465 1.1E-141 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS06235 bb5bc579028c7e5c360bb1e105ac94cf 481 SUPERFAMILY SSF51445 2 461 4.41E-160 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS06235 bb5bc579028c7e5c360bb1e105ac94cf 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 430 442 9.6E-17 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS06235 bb5bc579028c7e5c360bb1e105ac94cf 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 294 308 9.6E-17 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS06235 bb5bc579028c7e5c360bb1e105ac94cf 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 384 395 9.6E-17 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS06235 bb5bc579028c7e5c360bb1e105ac94cf 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 405 422 9.6E-17 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS06235 bb5bc579028c7e5c360bb1e105ac94cf 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 359 367 9.6E-17 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS06235 bb5bc579028c7e5c360bb1e105ac94cf 481 Gene3D G3DSA:3.20.20.80 4 465 7.2E-149 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS02755 a15354517431567cfe610251e5cd532e 415 SUPERFAMILY SSF52172 169 300 4.84E-34 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS02755 a15354517431567cfe610251e5cd532e 415 PANTHER PTHR24423:SF480 161 324 1.2E-47 T 23-04-2016 CLI_RS02755 a15354517431567cfe610251e5cd532e 415 Gene3D G3DSA:3.30.450.20 19 135 1.9E-5 T 23-04-2016 CLI_RS02755 a15354517431567cfe610251e5cd532e 415 SUPERFAMILY SSF47226 264 401 2.75E-14 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLI_RS02755 a15354517431567cfe610251e5cd532e 415 Pfam PF01627 Hpt domain 334 380 4.4E-5 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLI_RS02755 a15354517431567cfe610251e5cd532e 415 PANTHER PTHR24423 161 324 1.2E-47 T 23-04-2016 CLI_RS02755 a15354517431567cfe610251e5cd532e 415 Pfam PF08448 PAS fold 20 132 1.5E-7 T 23-04-2016 IPR013656 PAS fold-4 CLI_RS02755 a15354517431567cfe610251e5cd532e 415 SMART SM00448 168 281 5.0E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS02755 a15354517431567cfe610251e5cd532e 415 Pfam PF00072 Response regulator receiver domain 170 281 1.2E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS02755 a15354517431567cfe610251e5cd532e 415 Gene3D G3DSA:1.20.120.160 315 412 1.1E-15 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLI_RS02755 a15354517431567cfe610251e5cd532e 415 Gene3D G3DSA:3.40.50.2300 168 295 3.1E-37 T 23-04-2016 CLI_RS16335 eaef1d2e12b0be6fbf605f3e3a670757 154 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 8 147 3.9E-30 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 CLI_RS16335 eaef1d2e12b0be6fbf605f3e3a670757 154 PANTHER PTHR11124 18 149 5.8E-33 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 CLI_RS16335 eaef1d2e12b0be6fbf605f3e3a670757 154 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 5 142 1.1E-25 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type CLI_RS16335 eaef1d2e12b0be6fbf605f3e3a670757 154 SUPERFAMILY SSF56300 7 150 8.07E-31 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS16335 eaef1d2e12b0be6fbf605f3e3a670757 154 Gene3D G3DSA:3.60.21.10 7 147 1.0E-30 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS13485 c96b651eb4c19bfbf70eaf32f7ec3930 282 SUPERFAMILY SSF58104 115 279 6.28E-46 T 23-04-2016 CLI_RS13485 c96b651eb4c19bfbf70eaf32f7ec3930 282 Gene3D G3DSA:1.10.287.950 117 279 1.5E-41 T 23-04-2016 CLI_RS13485 c96b651eb4c19bfbf70eaf32f7ec3930 282 PANTHER PTHR32089 115 280 5.2E-39 T 23-04-2016 CLI_RS13485 c96b651eb4c19bfbf70eaf32f7ec3930 282 SMART SM00283 93 282 2.4E-14 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS13485 c96b651eb4c19bfbf70eaf32f7ec3930 282 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 146 237 1.2E-29 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS13485 c96b651eb4c19bfbf70eaf32f7ec3930 282 PANTHER PTHR32089:SF1 115 280 5.2E-39 T 23-04-2016 CLI_RS08950 f9ebcb1434b4a27ad8c2b11bea36c334 75 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 38 54 2.6E-10 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CLI_RS08950 f9ebcb1434b4a27ad8c2b11bea36c334 75 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 2.6E-10 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CLI_RS08950 f9ebcb1434b4a27ad8c2b11bea36c334 75 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 2.6E-10 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CLI_RS08950 f9ebcb1434b4a27ad8c2b11bea36c334 75 PANTHER PTHR35177 1 56 4.6E-14 T 23-04-2016 CLI_RS08950 f9ebcb1434b4a27ad8c2b11bea36c334 75 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 56 2.7E-18 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CLI_RS08950 f9ebcb1434b4a27ad8c2b11bea36c334 75 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 23-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site CLI_RS08950 f9ebcb1434b4a27ad8c2b11bea36c334 75 PANTHER PTHR35177:SF2 1 56 4.6E-14 T 23-04-2016 CLI_RS08950 f9ebcb1434b4a27ad8c2b11bea36c334 75 SUPERFAMILY SSF159127 1 69 2.35E-19 T 23-04-2016 CLI_RS08950 f9ebcb1434b4a27ad8c2b11bea36c334 75 Pfam PF01455 HupF/HypC family 1 56 1.7E-20 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CLI_RS18600 4b9ee76a14be3c3460e55e66c6fd1bca 328 PIRSF PIRSF033722 1 328 1.3E-149 T 23-04-2016 IPR017019 Predicted DNA replication protein, bacterial CLI_RS18600 4b9ee76a14be3c3460e55e66c6fd1bca 328 SUPERFAMILY SSF158499 121 187 1.22E-17 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS18600 4b9ee76a14be3c3460e55e66c6fd1bca 328 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 122 192 3.5E-17 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS18600 4b9ee76a14be3c3460e55e66c6fd1bca 328 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 218 278 1.0E-16 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS18600 4b9ee76a14be3c3460e55e66c6fd1bca 328 Gene3D G3DSA:1.10.10.630 117 192 2.1E-24 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS18600 4b9ee76a14be3c3460e55e66c6fd1bca 328 Gene3D G3DSA:1.10.10.630 206 278 7.1E-19 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS18600 4b9ee76a14be3c3460e55e66c6fd1bca 328 SUPERFAMILY SSF158499 211 274 3.01E-16 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS18600 4b9ee76a14be3c3460e55e66c6fd1bca 328 PANTHER PTHR37293 2 327 2.6E-155 T 23-04-2016 CLI_RS18600 4b9ee76a14be3c3460e55e66c6fd1bca 328 Pfam PF07261 Replication initiation and membrane attachment 223 278 1.6E-14 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS18600 4b9ee76a14be3c3460e55e66c6fd1bca 328 Pfam PF07261 Replication initiation and membrane attachment 123 195 5.1E-25 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS18600 4b9ee76a14be3c3460e55e66c6fd1bca 328 PANTHER PTHR37293:SF1 2 327 2.6E-155 T 23-04-2016 CLI_RS14580 3f7971f6e41357f095ec7074fe25f44d 320 SUPERFAMILY SSF48452 39 176 2.23E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS14580 3f7971f6e41357f095ec7074fe25f44d 320 Gene3D G3DSA:1.25.40.10 39 174 8.0E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS03915 ef746e9ab283b113a977f8ca048fa900 208 SUPERFAMILY SSF53335 5 183 2.01E-34 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS03915 ef746e9ab283b113a977f8ca048fa900 208 Pfam PF08241 Methyltransferase domain 43 138 4.5E-17 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLI_RS03915 ef746e9ab283b113a977f8ca048fa900 208 Gene3D G3DSA:3.40.50.150 37 185 6.2E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS03915 ef746e9ab283b113a977f8ca048fa900 208 PANTHER PTHR10108 5 181 2.6E-25 T 23-04-2016 CLI_RS15550 303a617b832f96ee07deb855c260fa51 337 SUPERFAMILY SSF51395 40 336 6.8E-61 T 23-04-2016 CLI_RS15550 303a617b832f96ee07deb855c260fa51 337 SMART SM01240 165 337 0.0023 T 23-04-2016 CLI_RS15550 303a617b832f96ee07deb855c260fa51 337 PANTHER PTHR10578 48 336 1.4E-84 T 23-04-2016 CLI_RS15550 303a617b832f96ee07deb855c260fa51 337 Gene3D G3DSA:3.20.20.70 1 336 1.6E-84 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS15550 303a617b832f96ee07deb855c260fa51 337 PANTHER PTHR10578:SF65 48 336 1.4E-84 T 23-04-2016 CLI_RS15550 303a617b832f96ee07deb855c260fa51 337 Pfam PF01070 FMN-dependent dehydrogenase 37 180 6.6E-12 T 23-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 CLI_RS15550 303a617b832f96ee07deb855c260fa51 337 Pfam PF01070 FMN-dependent dehydrogenase 194 336 3.3E-59 T 23-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 SUPERFAMILY SSF81665 2 114 1.83E-114 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 SUPERFAMILY SSF81665 225 318 1.83E-114 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 SUPERFAMILY SSF81665 659 865 1.83E-114 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 SUPERFAMILY SSF56784 322 342 2.62E-60 T 23-04-2016 IPR023214 HAD-like domain CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 SUPERFAMILY SSF56784 464 714 2.62E-60 T 23-04-2016 IPR023214 HAD-like domain CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 628 3.2E-39 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 645 3.2E-39 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 3.2E-39 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 539 3.2E-39 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 3.2E-39 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 518 3.2E-39 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PANTHER PTHR24093 1 745 0.0 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PANTHER PTHR24093 761 870 0.0 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 Pfam PF00690 Cation transporter/ATPase, N-terminus 5 71 6.6E-17 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PANTHER PTHR24093:SF329 1 745 0.0 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PANTHER PTHR24093:SF329 761 870 0.0 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 Gene3D G3DSA:3.40.1110.10 315 514 3.5E-60 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 Gene3D G3DSA:1.20.1110.10 578 865 8.1E-112 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 Gene3D G3DSA:1.20.1110.10 55 108 8.1E-112 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 SUPERFAMILY SSF81653 113 224 3.53E-33 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 Pfam PF00689 Cation transporting ATPase, C-terminus 693 862 1.3E-40 T 23-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 Pfam PF00702 haloacid dehalogenase-like hydrolase 321 623 1.2E-24 T 23-04-2016 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 82 347 1.4E-45 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 580 700 6.4E-33 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 SUPERFAMILY SSF81660 330 518 5.01E-51 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 581 597 2.7E-19 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 467 485 2.7E-19 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 641 666 2.7E-19 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 609 625 2.7E-19 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 SMART SM00831 3 76 6.3E-17 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 Gene3D G3DSA:2.70.150.10 20 54 4.9E-44 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 Gene3D G3DSA:2.70.150.10 109 225 4.9E-44 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS07925 680090b3c5f4e7b724a92da34e51ee94 878 Pfam PF00122 E1-E2 ATPase 81 315 4.5E-72 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 Pfam PF00230 Major intrinsic protein 4 230 2.6E-47 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 ProSitePatterns PS00221 MIP family signature. 62 70 - T 23-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 PANTHER PTHR19139 1 234 5.3E-98 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 230 5.2E-60 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 SUPERFAMILY SSF81338 3 234 2.88E-71 T 23-04-2016 IPR023271 Aquaporin-like CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.4E-46 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 PRINTS PR00783 Major intrinsic protein family signature 81 100 1.4E-46 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 PRINTS PR00783 Major intrinsic protein family signature 44 68 1.4E-46 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 PRINTS PR00783 Major intrinsic protein family signature 166 188 1.4E-46 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 PRINTS PR00783 Major intrinsic protein family signature 213 233 1.4E-46 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 PRINTS PR00783 Major intrinsic protein family signature 136 154 1.4E-46 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 Gene3D G3DSA:1.20.1080.10 3 233 3.2E-85 T 23-04-2016 IPR023271 Aquaporin-like CLI_RS13845 a7b7224bc1e65bbe5c04dfcae106b280 234 PANTHER PTHR19139:SF147 1 234 5.3E-98 T 23-04-2016 CLI_RS15365 7b42987dd321f9582a6f68a61ebf9542 118 Pfam PF03862 SpoVA protein 2 111 1.9E-33 T 23-04-2016 IPR005562 SpoVA CLI_RS15365 7b42987dd321f9582a6f68a61ebf9542 118 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 2.9E-48 T 23-04-2016 IPR014204 Sporulation stage V, protein AE CLI_RS15365 7b42987dd321f9582a6f68a61ebf9542 118 PANTHER PTHR38450 1 118 3.9E-66 T 23-04-2016 CLI_RS15365 7b42987dd321f9582a6f68a61ebf9542 118 PANTHER PTHR38450:SF2 1 118 3.9E-66 T 23-04-2016 CLI_RS14680 011dab7121ad737a400b373837b4bd3b 386 Pfam PF06898 Putative stage IV sporulation protein YqfD 6 371 1.7E-109 T 23-04-2016 IPR010690 Putative stage IV sporulation YqfD CLI_RS14680 011dab7121ad737a400b373837b4bd3b 386 PIRSF PIRSF029895 1 384 1.3E-79 T 23-04-2016 IPR010690 Putative stage IV sporulation YqfD CLI_RS14680 011dab7121ad737a400b373837b4bd3b 386 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 3 373 5.7E-144 T 23-04-2016 IPR010690 Putative stage IV sporulation YqfD CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 Pfam PF13431 Tetratricopeptide repeat 167 198 2.8E-5 T 23-04-2016 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 Pfam PF13432 Tetratricopeptide repeat 46 103 8.6E-8 T 23-04-2016 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 Gene3D G3DSA:1.25.40.10 220 282 3.2E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 PANTHER PTHR23083 2 283 3.8E-55 T 23-04-2016 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 Gene3D G3DSA:1.25.40.10 8 139 3.3E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 SUPERFAMILY SSF48452 5 281 9.96E-40 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 SMART SM00028 212 245 1.1 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 SMART SM00028 178 211 0.33 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 SMART SM00028 110 143 3.4E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 SMART SM00028 144 177 64.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 SMART SM00028 42 75 1.1E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 SMART SM00028 76 109 4.8E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 SMART SM00028 246 279 4.8E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 Pfam PF13181 Tetratricopeptide repeat 214 235 0.0035 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 Pfam PF13181 Tetratricopeptide repeat 111 143 3.6E-7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 Pfam PF13181 Tetratricopeptide repeat 248 277 2.1E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS05945 4e2442a2ccbc2b3e7f134020f8ca2146 303 Gene3D G3DSA:1.25.40.10 140 219 2.1E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS05495 689e7c1753b177a30e0438aa59892547 252 Gene3D G3DSA:1.10.10.60 139 198 5.1E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS05495 689e7c1753b177a30e0438aa59892547 252 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 199 241 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLI_RS05495 689e7c1753b177a30e0438aa59892547 252 SMART SM00342 162 245 3.0E-28 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS05495 689e7c1753b177a30e0438aa59892547 252 PANTHER PTHR11019 45 252 4.4E-42 T 23-04-2016 CLI_RS05495 689e7c1753b177a30e0438aa59892547 252 SUPERFAMILY SSF46689 145 194 4.12E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS05495 689e7c1753b177a30e0438aa59892547 252 Pfam PF12833 Helix-turn-helix domain 169 246 2.8E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS05495 689e7c1753b177a30e0438aa59892547 252 PANTHER PTHR11019:SF141 45 252 4.4E-42 T 23-04-2016 CLI_RS05495 689e7c1753b177a30e0438aa59892547 252 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 214 229 5.3E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS05495 689e7c1753b177a30e0438aa59892547 252 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 229 245 5.3E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS05495 689e7c1753b177a30e0438aa59892547 252 SUPERFAMILY SSF46689 198 248 6.72E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS05495 689e7c1753b177a30e0438aa59892547 252 Gene3D G3DSA:1.10.10.60 199 248 3.6E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS06710 9ed7dc30ee4b2f76ad1194e72141a24a 450 PRINTS PR00175 Sodium/alanine symporter signature 410 430 1.6E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06710 9ed7dc30ee4b2f76ad1194e72141a24a 450 PRINTS PR00175 Sodium/alanine symporter signature 184 202 1.6E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06710 9ed7dc30ee4b2f76ad1194e72141a24a 450 PRINTS PR00175 Sodium/alanine symporter signature 94 116 1.6E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06710 9ed7dc30ee4b2f76ad1194e72141a24a 450 PRINTS PR00175 Sodium/alanine symporter signature 212 231 1.6E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06710 9ed7dc30ee4b2f76ad1194e72141a24a 450 PRINTS PR00175 Sodium/alanine symporter signature 307 325 1.6E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06710 9ed7dc30ee4b2f76ad1194e72141a24a 450 PRINTS PR00175 Sodium/alanine symporter signature 351 373 1.6E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06710 9ed7dc30ee4b2f76ad1194e72141a24a 450 Pfam PF01235 Sodium:alanine symporter family 56 447 6.0E-147 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06710 9ed7dc30ee4b2f76ad1194e72141a24a 450 TIGRFAM TIGR00835 agcS: amino acid carrier protein 15 441 7.7E-148 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06710 9ed7dc30ee4b2f76ad1194e72141a24a 450 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 94 109 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06710 9ed7dc30ee4b2f76ad1194e72141a24a 450 PANTHER PTHR30330:SF4 1 450 0.0 T 23-04-2016 CLI_RS06710 9ed7dc30ee4b2f76ad1194e72141a24a 450 PANTHER PTHR30330 1 450 0.0 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS14245 0ba9862721abfb1656140d03b17b914f 619 PANTHER PTHR10342:SF225 221 561 5.4E-83 T 23-04-2016 CLI_RS14245 0ba9862721abfb1656140d03b17b914f 619 PIRSF PIRSF005091 1 619 3.6E-180 T 23-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 CLI_RS14245 0ba9862721abfb1656140d03b17b914f 619 Pfam PF00884 Sulfatase 249 536 3.0E-40 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CLI_RS14245 0ba9862721abfb1656140d03b17b914f 619 PANTHER PTHR10342 221 561 5.4E-83 T 23-04-2016 CLI_RS14245 0ba9862721abfb1656140d03b17b914f 619 SUPERFAMILY SSF53649 248 576 3.11E-66 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLI_RS14245 0ba9862721abfb1656140d03b17b914f 619 Gene3D G3DSA:3.40.720.10 249 548 2.6E-41 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLI_RS13000 acc455ffdb6c08f300097edcb83ceae3 89 PANTHER PTHR33677 7 89 1.0E-29 T 23-04-2016 CLI_RS13000 acc455ffdb6c08f300097edcb83ceae3 89 PANTHER PTHR33677:SF3 7 89 1.0E-29 T 23-04-2016 CLI_RS13000 acc455ffdb6c08f300097edcb83ceae3 89 Pfam PF02583 Metal-sensitive transcriptional repressor 9 84 9.1E-26 T 23-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 3 81 3.5E-18 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 PANTHER PTHR11956:SF1 1 563 1.8E-242 T 23-04-2016 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 120 131 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 Hamap MF_00123 Arginine--tRNA ligase [argS]. 1 563 25.988 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 Pfam PF05746 DALR anticodon binding domain 448 563 1.6E-31 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 SUPERFAMILY SSF52374 106 442 2.81E-98 T 23-04-2016 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 127 143 5.7E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 295 316 5.7E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 151 164 5.7E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 112 127 5.7E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 Gene3D G3DSA:3.40.50.620 105 440 3.9E-112 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 Pfam PF00750 tRNA synthetases class I (R) 92 434 1.9E-96 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 SMART SM01016 1 82 2.5E-26 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 Gene3D G3DSA:3.30.1360.70 3 99 3.7E-30 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 SMART SM00836 448 563 2.1E-42 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 9 563 2.8E-154 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 Gene3D G3DSA:1.10.730.10 442 563 5.7E-35 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 SUPERFAMILY SSF55190 3 103 4.05E-26 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 SUPERFAMILY SSF47323 442 563 1.31E-32 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS05630 59700e6cca2f23807e4c9c49c2fd5c22 563 PANTHER PTHR11956 1 563 1.8E-242 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 Pfam PF12833 Helix-turn-helix domain 29 104 1.2E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 SMART SM00342 21 103 1.7E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 SUPERFAMILY SSF46689 7 55 4.3E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 PANTHER PTHR11019 3 111 2.6E-28 T 23-04-2016 CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 Gene3D G3DSA:1.10.10.60 58 106 3.1E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 Gene3D G3DSA:1.10.10.60 1 57 7.6E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 SUPERFAMILY SSF55136 127 293 2.28E-16 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 Pfam PF14526 Integron-associated effector binding protein 127 291 4.0E-24 T 23-04-2016 IPR029441 Integron-associated effector binding protein CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 2.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 2.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 Gene3D G3DSA:3.20.80.10 119 292 3.6E-25 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 SMART SM00871 123 292 7.0E-28 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 99 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLI_RS10825 36224de05773d2971733b8dffe1f2619 296 SUPERFAMILY SSF46689 57 107 5.73E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08650 34618dde4b9e94b9c8d8669c8176051f 526 Gene3D G3DSA:3.40.50.300 317 525 2.1E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08650 34618dde4b9e94b9c8d8669c8176051f 526 PANTHER PTHR19211 1 525 0.0 T 23-04-2016 CLI_RS08650 34618dde4b9e94b9c8d8669c8176051f 526 SUPERFAMILY SSF52540 296 513 9.16E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08650 34618dde4b9e94b9c8d8669c8176051f 526 Gene3D G3DSA:3.40.50.300 132 281 1.4E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08650 34618dde4b9e94b9c8d8669c8176051f 526 Gene3D G3DSA:3.40.50.300 2 100 1.4E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08650 34618dde4b9e94b9c8d8669c8176051f 526 PANTHER PTHR19211:SF38 1 525 0.0 T 23-04-2016 CLI_RS08650 34618dde4b9e94b9c8d8669c8176051f 526 SUPERFAMILY SSF52540 125 254 2.98E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08650 34618dde4b9e94b9c8d8669c8176051f 526 SUPERFAMILY SSF52540 2 92 2.98E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08650 34618dde4b9e94b9c8d8669c8176051f 526 Pfam PF00005 ABC transporter 18 184 6.6E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS08650 34618dde4b9e94b9c8d8669c8176051f 526 Pfam PF00005 ABC transporter 335 466 1.2E-10 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS08650 34618dde4b9e94b9c8d8669c8176051f 526 SMART SM00382 26 228 2.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS08650 34618dde4b9e94b9c8d8669c8176051f 526 Pfam PF12848 ABC transporter 224 307 5.6E-21 T 23-04-2016 IPR032781 ABC-transporter extension domain CLI_RS13535 7f18e4e5af9f24dc5a081650f332ac7a 236 SUPERFAMILY SSF53448 4 230 1.1E-54 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS13535 7f18e4e5af9f24dc5a081650f332ac7a 236 Pfam PF02348 Cytidylyltransferase 8 196 1.5E-25 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CLI_RS13535 7f18e4e5af9f24dc5a081650f332ac7a 236 PANTHER PTHR21485 1 227 5.5E-53 T 23-04-2016 CLI_RS13535 7f18e4e5af9f24dc5a081650f332ac7a 236 PANTHER PTHR21485:SF20 1 227 5.5E-53 T 23-04-2016 CLI_RS13535 7f18e4e5af9f24dc5a081650f332ac7a 236 Gene3D G3DSA:3.90.550.10 4 231 3.5E-66 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS15955 309a9cd3d1fb3318492d96436e7238fc 108 Pfam PF05521 Phage head-tail joining protein 7 100 1.5E-20 T 23-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor CLI_RS15955 309a9cd3d1fb3318492d96436e7238fc 108 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 5 103 5.7E-13 T 23-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor CLI_RS10910 576be50ec20f644942d7b0b3f2a97a3d 497 SUPERFAMILY SSF46785 11 80 3.41E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10910 576be50ec20f644942d7b0b3f2a97a3d 497 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 6.4E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS10910 576be50ec20f644942d7b0b3f2a97a3d 497 Gene3D G3DSA:3.90.1150.10 363 470 2.2E-6 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS10910 576be50ec20f644942d7b0b3f2a97a3d 497 Gene3D G3DSA:1.10.10.10 3 77 4.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10910 576be50ec20f644942d7b0b3f2a97a3d 497 Pfam PF00155 Aminotransferase class I and II 141 468 5.1E-29 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS10910 576be50ec20f644942d7b0b3f2a97a3d 497 PANTHER PTHR11751 95 482 5.3E-95 T 23-04-2016 CLI_RS10910 576be50ec20f644942d7b0b3f2a97a3d 497 SMART SM00345 17 76 2.4E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS10910 576be50ec20f644942d7b0b3f2a97a3d 497 SUPERFAMILY SSF53383 97 481 1.97E-82 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS10910 576be50ec20f644942d7b0b3f2a97a3d 497 Gene3D G3DSA:3.40.640.10 148 362 1.7E-70 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS10910 576be50ec20f644942d7b0b3f2a97a3d 497 PANTHER PTHR11751:SF357 95 482 5.3E-95 T 23-04-2016 CLI_RS16115 5fa790f6c1f071e4b42e3d4a6e474799 77 SUPERFAMILY SSF47413 3 59 2.95E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS16115 5fa790f6c1f071e4b42e3d4a6e474799 77 Gene3D G3DSA:1.10.260.40 4 58 6.4E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS16115 5fa790f6c1f071e4b42e3d4a6e474799 77 SMART SM00530 2 57 6.8E-10 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS16115 5fa790f6c1f071e4b42e3d4a6e474799 77 Pfam PF01381 Helix-turn-helix 4 56 1.3E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS10690 ffcce02b1ffdfc956a7b30fc26c822e1 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 1.2E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS10690 ffcce02b1ffdfc956a7b30fc26c822e1 223 SMART SM00862 147 222 6.4E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS10690 ffcce02b1ffdfc956a7b30fc26c822e1 223 Gene3D G3DSA:1.10.10.10 125 222 5.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10690 ffcce02b1ffdfc956a7b30fc26c822e1 223 SUPERFAMILY SSF46894 125 222 1.9E-26 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS10690 ffcce02b1ffdfc956a7b30fc26c822e1 223 PANTHER PTHR26402 2 222 1.4E-151 T 23-04-2016 CLI_RS10690 ffcce02b1ffdfc956a7b30fc26c822e1 223 Gene3D G3DSA:3.40.50.2300 2 119 1.9E-35 T 23-04-2016 CLI_RS10690 ffcce02b1ffdfc956a7b30fc26c822e1 223 SMART SM00448 2 112 3.0E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS10690 ffcce02b1ffdfc956a7b30fc26c822e1 223 SUPERFAMILY SSF52172 1 125 6.12E-35 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS10690 ffcce02b1ffdfc956a7b30fc26c822e1 223 Pfam PF00072 Response regulator receiver domain 4 112 3.3E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS10690 ffcce02b1ffdfc956a7b30fc26c822e1 223 PANTHER PTHR26402:SF503 2 222 1.4E-151 T 23-04-2016 CLI_RS18520 6bbeadfb0c4e7859ec57a0600e2a8930 293 SUPERFAMILY SSF53850 90 291 1.09E-39 T 23-04-2016 CLI_RS18520 6bbeadfb0c4e7859ec57a0600e2a8930 293 Pfam PF03466 LysR substrate binding domain 89 291 4.9E-46 T 23-04-2016 IPR005119 LysR, substrate-binding CLI_RS18520 6bbeadfb0c4e7859ec57a0600e2a8930 293 PANTHER PTHR30126:SF11 1 293 2.1E-115 T 23-04-2016 CLI_RS18520 6bbeadfb0c4e7859ec57a0600e2a8930 293 Gene3D G3DSA:3.40.190.10 173 262 3.4E-22 T 23-04-2016 CLI_RS18520 6bbeadfb0c4e7859ec57a0600e2a8930 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS18520 6bbeadfb0c4e7859ec57a0600e2a8930 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS18520 6bbeadfb0c4e7859ec57a0600e2a8930 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS18520 6bbeadfb0c4e7859ec57a0600e2a8930 293 Gene3D G3DSA:1.10.10.10 1 81 1.9E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18520 6bbeadfb0c4e7859ec57a0600e2a8930 293 Gene3D G3DSA:3.40.190.10 90 172 1.1E-16 T 23-04-2016 CLI_RS18520 6bbeadfb0c4e7859ec57a0600e2a8930 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.5E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS18520 6bbeadfb0c4e7859ec57a0600e2a8930 293 SUPERFAMILY SSF46785 1 111 2.2E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18520 6bbeadfb0c4e7859ec57a0600e2a8930 293 PANTHER PTHR30126 1 293 2.1E-115 T 23-04-2016 CLI_RS15375 ded3c12e9155e341e35dc6bfef4f33e8 151 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 11 148 2.4E-60 T 23-04-2016 IPR014203 Sporulation stage V, protein AC CLI_RS15375 ded3c12e9155e341e35dc6bfef4f33e8 151 PANTHER PTHR38450 2 151 1.8E-93 T 23-04-2016 CLI_RS15375 ded3c12e9155e341e35dc6bfef4f33e8 151 PANTHER PTHR38450:SF1 2 151 1.8E-93 T 23-04-2016 CLI_RS15375 ded3c12e9155e341e35dc6bfef4f33e8 151 Pfam PF03862 SpoVA protein 29 144 6.0E-41 T 23-04-2016 IPR005562 SpoVA CLI_RS08275 a043a3c06d4db61eb071b76a65a59ee5 230 Gene3D G3DSA:3.40.50.2300 4 124 4.1E-41 T 23-04-2016 CLI_RS08275 a043a3c06d4db61eb071b76a65a59ee5 230 Pfam PF00072 Response regulator receiver domain 6 115 7.8E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS08275 a043a3c06d4db61eb071b76a65a59ee5 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 2.1E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS08275 a043a3c06d4db61eb071b76a65a59ee5 230 PANTHER PTHR26402 4 230 2.3E-107 T 23-04-2016 CLI_RS08275 a043a3c06d4db61eb071b76a65a59ee5 230 SUPERFAMILY SSF46894 129 228 4.54E-28 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS08275 a043a3c06d4db61eb071b76a65a59ee5 230 Gene3D G3DSA:1.10.10.10 129 229 3.7E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08275 a043a3c06d4db61eb071b76a65a59ee5 230 PANTHER PTHR26402:SF50 4 230 2.3E-107 T 23-04-2016 CLI_RS08275 a043a3c06d4db61eb071b76a65a59ee5 230 SUPERFAMILY SSF52172 4 128 9.39E-42 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS08275 a043a3c06d4db61eb071b76a65a59ee5 230 SMART SM00448 4 114 6.7E-43 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS08275 a043a3c06d4db61eb071b76a65a59ee5 230 SMART SM00862 152 228 1.5E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 16 366 3.4E-123 T 23-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 Gene3D G3DSA:3.20.20.70 246 367 2.7E-30 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 Pfam PF00571 CBS domain 310 365 4.9E-10 T 23-04-2016 IPR000644 CBS domain CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 Pfam PF00571 CBS domain 250 300 1.1E-9 T 23-04-2016 IPR000644 CBS domain CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 SMART SM00382 26 213 9.3E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 PANTHER PTHR24220:SF434 3 273 1.3E-155 T 23-04-2016 CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 PANTHER PTHR24220 3 273 1.3E-155 T 23-04-2016 CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 Pfam PF00005 ABC transporter 18 163 3.9E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 SUPERFAMILY SSF54631 248 364 3.41E-28 T 23-04-2016 CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 SMART SM00116 317 365 1.4E-6 T 23-04-2016 IPR000644 CBS domain CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 SMART SM00116 257 305 2.9E-5 T 23-04-2016 IPR000644 CBS domain CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 SUPERFAMILY SSF52540 1 242 4.07E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08390 d2678d2e8ba7198da52adef955f0ba27 377 Gene3D G3DSA:3.40.50.300 1 236 2.8E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10055 8b768bc2e34c85754053d7a768459371 475 SUPERFAMILY SSF55604 8 81 2.35E-21 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS10055 8b768bc2e34c85754053d7a768459371 475 Pfam PF02378 Phosphotransferase system, EIIC 111 409 6.0E-36 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS10055 8b768bc2e34c85754053d7a768459371 475 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 466 3.8E-213 T 23-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 CLI_RS10055 8b768bc2e34c85754053d7a768459371 475 PANTHER PTHR30175 1 469 4.2E-279 T 23-04-2016 CLI_RS10055 8b768bc2e34c85754053d7a768459371 475 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS10055 8b768bc2e34c85754053d7a768459371 475 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 106 8.2E-13 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS10055 8b768bc2e34c85754053d7a768459371 475 PANTHER PTHR30175:SF4 1 469 4.2E-279 T 23-04-2016 CLI_RS10055 8b768bc2e34c85754053d7a768459371 475 Pfam PF00367 phosphotransferase system, EIIB 9 42 5.6E-15 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS10055 8b768bc2e34c85754053d7a768459371 475 Gene3D G3DSA:3.30.1360.60 4 82 6.7E-26 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 Gene3D G3DSA:3.90.110.10 170 443 1.4E-101 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 23-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 419 2.4E-50 T 23-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 Pfam PF02056 Family 4 glycosyl hydrolase 8 187 2.4E-62 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 PANTHER PTHR32092:SF7 4 444 0.0 T 23-04-2016 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 2.9E-55 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 2.9E-55 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 8 23 2.9E-55 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 2.9E-55 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 2.9E-55 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 2.9E-55 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 2.9E-55 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 SUPERFAMILY SSF56327 171 444 4.72E-90 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 PANTHER PTHR32092 4 444 0.0 T 23-04-2016 CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 SUPERFAMILY SSF51735 6 166 2.7E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01665 17fc5ea18604f49021a1b8f357e16220 444 Gene3D G3DSA:3.40.50.720 5 168 1.5E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS05480 2ffee6c755d75ca53308fdda4e487e0d 233 SUPERFAMILY SSF52172 5 124 3.42E-42 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS05480 2ffee6c755d75ca53308fdda4e487e0d 233 Pfam PF00072 Response regulator receiver domain 7 116 3.7E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS05480 2ffee6c755d75ca53308fdda4e487e0d 233 SUPERFAMILY SSF46894 134 229 9.64E-30 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS05480 2ffee6c755d75ca53308fdda4e487e0d 233 Gene3D G3DSA:3.40.50.2300 3 123 3.3E-43 T 23-04-2016 CLI_RS05480 2ffee6c755d75ca53308fdda4e487e0d 233 SMART SM00862 153 229 5.0E-27 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS05480 2ffee6c755d75ca53308fdda4e487e0d 233 PANTHER PTHR26402 5 229 3.3E-120 T 23-04-2016 CLI_RS05480 2ffee6c755d75ca53308fdda4e487e0d 233 SMART SM00448 5 115 1.9E-46 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS05480 2ffee6c755d75ca53308fdda4e487e0d 233 Gene3D G3DSA:1.10.10.10 134 230 1.8E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05480 2ffee6c755d75ca53308fdda4e487e0d 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 2.1E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS05480 2ffee6c755d75ca53308fdda4e487e0d 233 PANTHER PTHR26402:SF614 5 229 3.3E-120 T 23-04-2016 CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 9 619 5.5E-254 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 280 9.0E-122 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 4 620 44.579 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 PANTHER PTHR11624:SF20 18 212 0.0 T 23-04-2016 CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 PANTHER PTHR11624:SF20 239 620 0.0 T 23-04-2016 CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 SUPERFAMILY SSF52518 4 346 3.93E-79 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 SUPERFAMILY SSF52922 489 619 4.06E-32 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 PANTHER PTHR11624 18 212 0.0 T 23-04-2016 IPR033247 Transketolase family CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 PANTHER PTHR11624 239 620 0.0 T 23-04-2016 IPR033247 Transketolase family CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 SUPERFAMILY SSF52518 289 475 1.86E-60 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 SMART SM00861 315 479 6.1E-66 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 Gene3D G3DSA:3.40.50.970 330 474 4.3E-34 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 Pfam PF02779 Transketolase, pyrimidine binding domain 315 474 3.1E-38 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 Pfam PF02780 Transketolase, C-terminal domain 491 612 1.5E-30 T 23-04-2016 IPR033248 Transketolase, C-terminal domain CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 Gene3D G3DSA:3.40.50.970 240 329 4.1E-75 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 Gene3D G3DSA:3.40.50.970 18 195 4.1E-75 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 ProSitePatterns PS00802 Transketolase signature 2. 421 437 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 ProSitePatterns PS00801 Transketolase signature 1. 30 49 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CLI_RS09515 e77c4de521e3917b4d86fe416151fb4c 620 Gene3D G3DSA:3.40.50.920 491 619 5.7E-35 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLI_RS06400 4f8bf430c3f95210d8a8509fc80cb1b6 208 PANTHER PTHR11241 166 207 6.7E-36 T 23-04-2016 CLI_RS06400 4f8bf430c3f95210d8a8509fc80cb1b6 208 PANTHER PTHR11241 1 107 6.7E-36 T 23-04-2016 CLI_RS06400 4f8bf430c3f95210d8a8509fc80cb1b6 208 Gene3D G3DSA:2.70.40.10 159 207 1.3E-45 T 23-04-2016 IPR029054 dUTPase-like CLI_RS06400 4f8bf430c3f95210d8a8509fc80cb1b6 208 Gene3D G3DSA:2.70.40.10 4 98 1.3E-45 T 23-04-2016 IPR029054 dUTPase-like CLI_RS06400 4f8bf430c3f95210d8a8509fc80cb1b6 208 SUPERFAMILY SSF51283 7 98 5.56E-30 T 23-04-2016 IPR029054 dUTPase-like CLI_RS06400 4f8bf430c3f95210d8a8509fc80cb1b6 208 SUPERFAMILY SSF51283 159 206 5.56E-30 T 23-04-2016 IPR029054 dUTPase-like CLI_RS06400 4f8bf430c3f95210d8a8509fc80cb1b6 208 Pfam PF00692 dUTPase 15 99 2.2E-14 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 CLI_RS06400 4f8bf430c3f95210d8a8509fc80cb1b6 208 Pfam PF00692 dUTPase 163 206 3.0E-5 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 ProSitePatterns PS00211 ABC transporters family signature. 660 674 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 Gene3D G3DSA:3.40.50.300 94 130 8.7E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 PANTHER PTHR24221 1 51 3.7E-233 T 23-04-2016 CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 PANTHER PTHR24221 240 764 3.7E-233 T 23-04-2016 CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 Pfam PF00005 ABC transporter 539 686 4.2E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 PANTHER PTHR24221:SF190 1 51 3.7E-233 T 23-04-2016 CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 PANTHER PTHR24221:SF190 240 764 3.7E-233 T 23-04-2016 CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 Pfam PF00664 ABC transporter transmembrane region 248 475 1.1E-31 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 SMART SM00382 548 734 1.2E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 Gene3D G3DSA:1.20.1560.10 236 502 7.9E-60 T 23-04-2016 CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 Gene3D G3DSA:1.20.1560.10 4 51 7.9E-60 T 23-04-2016 CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 Gene3D G3DSA:3.40.50.300 521 752 5.2E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 SUPERFAMILY SSF52540 515 758 3.15E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 SUPERFAMILY SSF90123 230 507 1.83E-67 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS09775 331990afb8b938747708a5bcb2b2c138 766 SUPERFAMILY SSF90123 4 41 1.83E-67 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS05850 c348b910b0a83a9993ddd37d33d68178 327 Gene3D G3DSA:3.30.930.10 69 256 3.3E-55 T 23-04-2016 CLI_RS05850 c348b910b0a83a9993ddd37d33d68178 327 SUPERFAMILY SSF46785 4 57 3.26E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05850 c348b910b0a83a9993ddd37d33d68178 327 Pfam PF02237 Biotin protein ligase C terminal domain 275 321 7.3E-9 T 23-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 CLI_RS05850 c348b910b0a83a9993ddd37d33d68178 327 PANTHER PTHR12835 3 327 9.0E-90 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 CLI_RS05850 c348b910b0a83a9993ddd37d33d68178 327 SUPERFAMILY SSF50037 276 322 2.93E-7 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal CLI_RS05850 c348b910b0a83a9993ddd37d33d68178 327 SUPERFAMILY SSF55681 68 257 5.05E-53 T 23-04-2016 CLI_RS05850 c348b910b0a83a9993ddd37d33d68178 327 Pfam PF03099 Biotin/lipoate A/B protein ligase family 87 208 7.4E-15 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CLI_RS05850 c348b910b0a83a9993ddd37d33d68178 327 Pfam PF08279 HTH domain 3 56 1.1E-15 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 CLI_RS05850 c348b910b0a83a9993ddd37d33d68178 327 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 4 321 35.593 T 23-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 CLI_RS05850 c348b910b0a83a9993ddd37d33d68178 327 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 320 6.9E-55 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 CLI_RS05850 c348b910b0a83a9993ddd37d33d68178 327 Gene3D G3DSA:2.30.30.100 274 324 2.3E-14 T 23-04-2016 CLI_RS05850 c348b910b0a83a9993ddd37d33d68178 327 Gene3D G3DSA:1.10.10.10 4 59 4.1E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18725 f9d27302dfb9c3e4265bedc67212cba4 661 PANTHER PTHR12112 14 622 5.0E-267 T 23-04-2016 CLI_RS18725 f9d27302dfb9c3e4265bedc67212cba4 661 PANTHER PTHR12112:SF18 14 622 5.0E-267 T 23-04-2016 CLI_RS18725 f9d27302dfb9c3e4265bedc67212cba4 661 Gene3D G3DSA:3.90.1640.10 348 540 2.2E-42 T 23-04-2016 CLI_RS18725 f9d27302dfb9c3e4265bedc67212cba4 661 SUPERFAMILY SSF64182 349 647 1.96E-65 T 23-04-2016 CLI_RS18725 f9d27302dfb9c3e4265bedc67212cba4 661 Pfam PF02272 DHHA1 domain 595 649 2.8E-10 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 CLI_RS18725 f9d27302dfb9c3e4265bedc67212cba4 661 Pfam PF01368 DHH family 349 504 1.1E-20 T 23-04-2016 IPR001667 DDH domain CLI_RS18725 f9d27302dfb9c3e4265bedc67212cba4 661 PIRSF PIRSF026583 1 661 1.9E-218 T 23-04-2016 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA CLI_RS12280 3e0a2b2d7fabd90f8e69746863d158ee 332 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 326 2.6E-125 T 23-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CLI_RS12280 3e0a2b2d7fabd90f8e69746863d158ee 332 SUPERFAMILY SSF53659 1 329 1.19E-104 T 23-04-2016 CLI_RS12280 3e0a2b2d7fabd90f8e69746863d158ee 332 PIRSF PIRSF000428 1 332 4.7E-116 T 23-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CLI_RS12280 3e0a2b2d7fabd90f8e69746863d158ee 332 PANTHER PTHR23406 231 332 6.1E-54 T 23-04-2016 CLI_RS12280 3e0a2b2d7fabd90f8e69746863d158ee 332 Gene3D G3DSA:3.40.50.10750 137 302 1.2E-67 T 23-04-2016 CLI_RS12280 3e0a2b2d7fabd90f8e69746863d158ee 332 Pfam PF01515 Phosphate acetyl/butaryl transferase 3 326 5.0E-137 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CLI_RS12280 3e0a2b2d7fabd90f8e69746863d158ee 332 PANTHER PTHR23406:SF3 231 332 6.1E-54 T 23-04-2016 CLI_RS12895 56949a76fd838b40ea47119eb2843964 444 TIGRFAM TIGR00835 agcS: amino acid carrier protein 15 437 3.9E-151 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12895 56949a76fd838b40ea47119eb2843964 444 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 89 104 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12895 56949a76fd838b40ea47119eb2843964 444 Pfam PF01235 Sodium:alanine symporter family 50 440 3.1E-145 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12895 56949a76fd838b40ea47119eb2843964 444 PANTHER PTHR30330 1 443 0.0 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12895 56949a76fd838b40ea47119eb2843964 444 PRINTS PR00175 Sodium/alanine symporter signature 180 198 5.9E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12895 56949a76fd838b40ea47119eb2843964 444 PRINTS PR00175 Sodium/alanine symporter signature 406 426 5.9E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12895 56949a76fd838b40ea47119eb2843964 444 PRINTS PR00175 Sodium/alanine symporter signature 89 111 5.9E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12895 56949a76fd838b40ea47119eb2843964 444 PRINTS PR00175 Sodium/alanine symporter signature 303 321 5.9E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12895 56949a76fd838b40ea47119eb2843964 444 PRINTS PR00175 Sodium/alanine symporter signature 208 227 5.9E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12895 56949a76fd838b40ea47119eb2843964 444 PRINTS PR00175 Sodium/alanine symporter signature 347 369 5.9E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12895 56949a76fd838b40ea47119eb2843964 444 PANTHER PTHR30330:SF4 1 443 0.0 T 23-04-2016 CLI_RS00010 d049458c24854fe95170b35251752e6a 445 Pfam PF11638 DnaA N-terminal domain 7 67 1.2E-13 T 23-04-2016 IPR024633 DnaA N-terminal domain CLI_RS00010 d049458c24854fe95170b35251752e6a 445 SUPERFAMILY SSF52540 108 320 6.32E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00010 d049458c24854fe95170b35251752e6a 445 PANTHER PTHR30050:SF2 4 445 7.9E-247 T 23-04-2016 CLI_RS00010 d049458c24854fe95170b35251752e6a 445 ProSitePatterns PS01008 DnaA protein signature. 402 421 - T 23-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CLI_RS00010 d049458c24854fe95170b35251752e6a 445 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 205 219 6.0E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CLI_RS00010 d049458c24854fe95170b35251752e6a 445 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 239 266 6.0E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CLI_RS00010 d049458c24854fe95170b35251752e6a 445 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 402 421 6.0E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CLI_RS00010 d049458c24854fe95170b35251752e6a 445 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 141 161 6.0E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CLI_RS00010 d049458c24854fe95170b35251752e6a 445 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 173 187 6.0E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CLI_RS00010 d049458c24854fe95170b35251752e6a 445 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 353 421 2.7E-33 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CLI_RS00010 d049458c24854fe95170b35251752e6a 445 PANTHER PTHR30050 4 445 7.9E-247 T 23-04-2016 CLI_RS00010 d049458c24854fe95170b35251752e6a 445 SMART SM00382 140 268 7.9E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS00010 d049458c24854fe95170b35251752e6a 445 SMART SM00760 352 421 9.8E-46 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CLI_RS00010 d049458c24854fe95170b35251752e6a 445 SUPERFAMILY SSF48295 339 444 2.88E-39 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 CLI_RS00010 d049458c24854fe95170b35251752e6a 445 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 442 8.4E-185 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CLI_RS00010 d049458c24854fe95170b35251752e6a 445 Pfam PF00308 Bacterial dnaA protein 108 325 7.9E-104 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA CLI_RS00010 d049458c24854fe95170b35251752e6a 445 Gene3D G3DSA:1.10.8.60 274 342 1.5E-31 T 23-04-2016 CLI_RS00010 d049458c24854fe95170b35251752e6a 445 Gene3D G3DSA:3.40.50.300 96 271 4.3E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00010 d049458c24854fe95170b35251752e6a 445 Gene3D G3DSA:1.10.1750.10 343 444 5.5E-44 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CLI_RS00010 d049458c24854fe95170b35251752e6a 445 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 443 35.012 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CLI_RS13740 ab221381e41ec2db9da38e8a80e46867 593 SUPERFAMILY SSF64182 53 457 7.19E-113 T 23-04-2016 CLI_RS13740 ab221381e41ec2db9da38e8a80e46867 593 PANTHER PTHR30255:SF2 2 544 2.7E-224 T 23-04-2016 CLI_RS13740 ab221381e41ec2db9da38e8a80e46867 593 PANTHER PTHR30255:SF2 562 592 2.7E-224 T 23-04-2016 CLI_RS13740 ab221381e41ec2db9da38e8a80e46867 593 Pfam PF01368 DHH family 78 218 1.6E-13 T 23-04-2016 IPR001667 DDH domain CLI_RS13740 ab221381e41ec2db9da38e8a80e46867 593 PANTHER PTHR30255 2 544 2.7E-224 T 23-04-2016 CLI_RS13740 ab221381e41ec2db9da38e8a80e46867 593 PANTHER PTHR30255 562 592 2.7E-224 T 23-04-2016 CLI_RS13740 ab221381e41ec2db9da38e8a80e46867 593 Pfam PF02272 DHHA1 domain 383 446 3.3E-11 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 CLI_RS13740 ab221381e41ec2db9da38e8a80e46867 593 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 546 2.0E-161 T 23-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CLI_RS15245 fbc814425984658d7dbf8cdbc206f18c 172 Pfam PF00156 Phosphoribosyl transferase domain 36 148 1.1E-16 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS15245 fbc814425984658d7dbf8cdbc206f18c 172 Gene3D G3DSA:3.40.50.2020 2 171 2.1E-69 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS15245 fbc814425984658d7dbf8cdbc206f18c 172 PANTHER PTHR32315 3 172 1.2E-88 T 23-04-2016 CLI_RS15245 fbc814425984658d7dbf8cdbc206f18c 172 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 1.3E-72 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 CLI_RS15245 fbc814425984658d7dbf8cdbc206f18c 172 SUPERFAMILY SSF53271 2 171 1.7E-52 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS15245 fbc814425984658d7dbf8cdbc206f18c 172 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.904 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 CLI_RS01820 638c025c09de403cb9e13f165c4e9b0a 135 Gene3D G3DSA:1.20.120.580 6 135 1.1E-31 T 23-04-2016 CLI_RS01820 638c025c09de403cb9e13f165c4e9b0a 135 SUPERFAMILY SSF81593 15 128 3.85E-5 T 23-04-2016 CLI_RS01820 638c025c09de403cb9e13f165c4e9b0a 135 PANTHER PTHR33397 27 135 2.8E-17 T 23-04-2016 CLI_RS01820 638c025c09de403cb9e13f165c4e9b0a 135 Pfam PF01934 Protein of unknown function DUF86 15 129 4.3E-24 T 23-04-2016 IPR008201 Protein of unknown function DUF86 CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 SUPERFAMILY SSF52540 231 474 1.59E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 SMART SM00382 252 396 2.1E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 Gene3D G3DSA:1.10.8.60 406 483 3.4E-23 T 23-04-2016 CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 Pfam PF00158 Sigma-54 interaction domain 232 399 4.9E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 Gene3D G3DSA:1.10.10.60 489 541 1.5E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 Pfam PF02954 Bacterial regulatory protein, Fis family 499 539 9.8E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 PANTHER PTHR32071:SF26 161 541 3.7E-195 T 23-04-2016 CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 256 269 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 SUPERFAMILY SSF46689 446 541 1.43E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 PANTHER PTHR32071 161 541 3.7E-195 T 23-04-2016 CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 319 334 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 522 542 8.19E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 505 522 8.19E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 Gene3D G3DSA:3.40.50.300 229 405 6.7E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16265 d0b56af315bb855a639bf815c4baa883 542 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 446 455 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 Gene3D G3DSA:1.10.8.60 448 519 2.8E-21 T 23-04-2016 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 361 376 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 299 312 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 SMART SM00091 137 203 6.5E-9 T 23-04-2016 IPR000014 PAS domain CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 PANTHER PTHR32071:SF27 71 583 3.4E-179 T 23-04-2016 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 SUPERFAMILY SSF52540 275 518 4.04E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 Gene3D G3DSA:3.40.50.300 272 447 1.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 Pfam PF00158 Sigma-54 interaction domain 275 442 5.1E-65 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 547 564 5.4E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 564 584 5.4E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 SUPERFAMILY SSF55785 132 232 8.38E-13 T 23-04-2016 IPR000014 PAS domain CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 Gene3D G3DSA:3.30.450.20 137 239 4.7E-13 T 23-04-2016 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 241 2.3E-8 T 23-04-2016 IPR000014 PAS domain CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 Gene3D G3DSA:3.10.580.10 7 124 1.5E-25 T 23-04-2016 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 Pfam PF02954 Bacterial regulatory protein, Fis family 542 581 1.2E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 SUPERFAMILY SSF54631 9 136 2.4E-23 T 23-04-2016 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 Pfam PF00571 CBS domain 11 63 1.2E-5 T 23-04-2016 IPR000644 CBS domain CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 Pfam PF00571 CBS domain 80 124 3.3E-7 T 23-04-2016 IPR000644 CBS domain CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 SMART SM00116 82 129 1.4E-7 T 23-04-2016 IPR000644 CBS domain CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 SMART SM00116 18 66 3.8 T 23-04-2016 IPR000644 CBS domain CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 SUPERFAMILY SSF46689 488 583 2.82E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 PANTHER PTHR32071 71 583 3.4E-179 T 23-04-2016 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 Gene3D G3DSA:1.10.10.60 520 583 4.2E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 Pfam PF13426 PAS domain 148 240 2.6E-10 T 23-04-2016 IPR000014 PAS domain CLI_RS12450 b68e5235e84de67ac3b2ca81ab91af73 584 SMART SM00382 295 447 6.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS01745 d2fb0131aec602abeeec0c693265b694 323 Gene3D G3DSA:1.10.10.60 273 321 2.2E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS01745 d2fb0131aec602abeeec0c693265b694 323 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 272 314 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLI_RS01745 d2fb0131aec602abeeec0c693265b694 323 Pfam PF12833 Helix-turn-helix domain 243 319 3.7E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS01745 d2fb0131aec602abeeec0c693265b694 323 PANTHER PTHR11019:SF141 24 321 7.7E-84 T 23-04-2016 CLI_RS01745 d2fb0131aec602abeeec0c693265b694 323 SMART SM00342 235 318 3.0E-26 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS01745 d2fb0131aec602abeeec0c693265b694 323 PANTHER PTHR11019 24 321 7.7E-84 T 23-04-2016 CLI_RS01745 d2fb0131aec602abeeec0c693265b694 323 SUPERFAMILY SSF46689 272 321 3.4E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS01745 d2fb0131aec602abeeec0c693265b694 323 Gene3D G3DSA:1.10.10.60 227 270 4.4E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS01745 d2fb0131aec602abeeec0c693265b694 323 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 302 318 4.4E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS01745 d2fb0131aec602abeeec0c693265b694 323 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 302 4.4E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 SUPERFAMILY SSF56784 322 342 3.71E-62 T 23-04-2016 IPR023214 HAD-like domain CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 SUPERFAMILY SSF56784 464 713 3.71E-62 T 23-04-2016 IPR023214 HAD-like domain CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 Pfam PF00122 E1-E2 ATPase 81 315 1.1E-67 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 TIGRFAM TIGR01116 ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 52 868 1.3E-212 T 23-04-2016 IPR005782 P-type ATPase, subfamily IIA, SERCA-type GO:0005388|GO:0006816|GO:0016021 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 PANTHER PTHR24093 761 872 0.0 T 23-04-2016 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 PANTHER PTHR24093 2 745 0.0 T 23-04-2016 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 Gene3D G3DSA:3.40.1110.10 315 514 2.0E-62 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 Gene3D G3DSA:1.20.1110.10 578 868 6.8E-128 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 Gene3D G3DSA:1.20.1110.10 55 107 6.8E-128 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 Gene3D G3DSA:2.70.150.10 108 224 2.0E-44 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 Gene3D G3DSA:2.70.150.10 12 54 2.0E-44 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 Pfam PF00690 Cation transporter/ATPase, N-terminus 2 70 2.3E-22 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 1.1E-42 T 23-04-2016 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 539 1.1E-42 T 23-04-2016 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 1.1E-42 T 23-04-2016 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 628 1.1E-42 T 23-04-2016 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 518 1.1E-42 T 23-04-2016 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 645 1.1E-42 T 23-04-2016 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 7 864 2.4E-163 T 23-04-2016 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 SUPERFAMILY SSF81665 2 113 2.22E-139 T 23-04-2016 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 SUPERFAMILY SSF81665 225 318 2.22E-139 T 23-04-2016 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 SUPERFAMILY SSF81665 659 869 2.22E-139 T 23-04-2016 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 SUPERFAMILY SSF81660 331 511 2.22E-52 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 Pfam PF00702 haloacid dehalogenase-like hydrolase 320 623 4.3E-22 T 23-04-2016 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 82 176 2.2E-19 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 580 694 1.8E-36 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 215 351 1.3E-28 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 609 625 5.7E-20 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 581 597 5.7E-20 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 467 485 5.7E-20 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 641 666 5.7E-20 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 SMART SM00831 1 75 3.8E-29 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 Pfam PF00689 Cation transporting ATPase, C-terminus 693 866 1.4E-50 T 23-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal CLI_RS02880 055a7957ae3cb708d21df4d44f46ef9c 872 SUPERFAMILY SSF81653 113 224 2.09E-30 T 23-04-2016 CLI_RS15660 74f3a33c4413174f71d5f5ab0592b9bc 231 Pfam PF00005 ABC transporter 17 155 3.9E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS15660 74f3a33c4413174f71d5f5ab0592b9bc 231 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS15660 74f3a33c4413174f71d5f5ab0592b9bc 231 PANTHER PTHR24220 3 230 4.0E-78 T 23-04-2016 CLI_RS15660 74f3a33c4413174f71d5f5ab0592b9bc 231 SUPERFAMILY SSF52540 2 219 6.46E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15660 74f3a33c4413174f71d5f5ab0592b9bc 231 SMART SM00382 26 213 9.2E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS15660 74f3a33c4413174f71d5f5ab0592b9bc 231 Gene3D G3DSA:3.40.50.300 1 220 1.4E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15660 74f3a33c4413174f71d5f5ab0592b9bc 231 PANTHER PTHR24220:SF193 3 230 4.0E-78 T 23-04-2016 CLI_RS14115 d6970d5e4dead88e64a1a944c8344e83 285 SUPERFAMILY SSF50151 9 62 4.45E-14 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS14115 d6970d5e4dead88e64a1a944c8344e83 285 SUPERFAMILY SSF63520 63 174 2.75E-30 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS14115 d6970d5e4dead88e64a1a944c8344e83 285 PANTHER PTHR30185:SF3 1 285 2.7E-152 T 23-04-2016 CLI_RS14115 d6970d5e4dead88e64a1a944c8344e83 285 SMART SM01061 9 67 1.6E-20 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS14115 d6970d5e4dead88e64a1a944c8344e83 285 Pfam PF00874 PRD domain 189 277 3.5E-23 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS14115 d6970d5e4dead88e64a1a944c8344e83 285 Pfam PF00874 PRD domain 83 171 1.2E-23 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS14115 d6970d5e4dead88e64a1a944c8344e83 285 Pfam PF03123 CAT RNA binding domain 9 63 7.8E-17 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS14115 d6970d5e4dead88e64a1a944c8344e83 285 Gene3D G3DSA:1.10.1790.10 73 174 2.4E-29 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS14115 d6970d5e4dead88e64a1a944c8344e83 285 Gene3D G3DSA:1.10.1790.10 178 278 2.1E-29 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS14115 d6970d5e4dead88e64a1a944c8344e83 285 Gene3D G3DSA:2.30.24.10 9 62 2.9E-18 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS14115 d6970d5e4dead88e64a1a944c8344e83 285 SUPERFAMILY SSF63520 179 277 5.49E-26 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS14115 d6970d5e4dead88e64a1a944c8344e83 285 PANTHER PTHR30185 1 285 2.7E-152 T 23-04-2016 CLI_RS16750 674f7ba7197a7a26e7520500bd78955c 99 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 10 96 7.0E-45 T 23-04-2016 IPR013368 TrpR homologue YerC/YecD CLI_RS16750 674f7ba7197a7a26e7520500bd78955c 99 Pfam PF01371 Trp repressor protein 12 95 2.3E-32 T 23-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 CLI_RS16750 674f7ba7197a7a26e7520500bd78955c 99 SUPERFAMILY SSF48295 2 96 5.23E-33 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 CLI_RS16750 674f7ba7197a7a26e7520500bd78955c 99 Gene3D G3DSA:1.10.1270.10 4 98 5.0E-44 T 23-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 CLI_RS16750 674f7ba7197a7a26e7520500bd78955c 99 PIRSF PIRSF012508 1 99 6.6E-47 T 23-04-2016 IPR013368 TrpR homologue YerC/YecD CLI_RS16750 674f7ba7197a7a26e7520500bd78955c 99 PANTHER PTHR40080 2 99 8.9E-44 T 23-04-2016 CLI_RS16750 674f7ba7197a7a26e7520500bd78955c 99 PANTHER PTHR40080:SF1 2 99 8.9E-44 T 23-04-2016 CLI_RS04140 472d0175279dc7a8444b5d5b9083a74b 230 PANTHER PTHR26402:SF483 5 228 1.4E-88 T 23-04-2016 CLI_RS04140 472d0175279dc7a8444b5d5b9083a74b 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 6.9E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS04140 472d0175279dc7a8444b5d5b9083a74b 230 SMART SM00448 5 115 1.3E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS04140 472d0175279dc7a8444b5d5b9083a74b 230 Gene3D G3DSA:1.10.10.10 131 229 3.2E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04140 472d0175279dc7a8444b5d5b9083a74b 230 Gene3D G3DSA:3.40.50.2300 3 127 4.3E-38 T 23-04-2016 CLI_RS04140 472d0175279dc7a8444b5d5b9083a74b 230 SUPERFAMILY SSF52172 4 186 2.11E-40 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS04140 472d0175279dc7a8444b5d5b9083a74b 230 PANTHER PTHR26402 5 228 1.4E-88 T 23-04-2016 CLI_RS04140 472d0175279dc7a8444b5d5b9083a74b 230 SMART SM00862 152 228 6.0E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS04140 472d0175279dc7a8444b5d5b9083a74b 230 Pfam PF00072 Response regulator receiver domain 7 115 7.2E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS17330 38b5cd2818638d9420e258a588f9a7c4 306 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 26 302 1.5E-78 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS17330 38b5cd2818638d9420e258a588f9a7c4 306 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 306 96.056 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS17330 38b5cd2818638d9420e258a588f9a7c4 306 Gene3D G3DSA:3.90.78.10 230 304 4.2E-34 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS17330 38b5cd2818638d9420e258a588f9a7c4 306 Gene3D G3DSA:3.30.465.10 92 229 4.1E-48 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLI_RS17330 38b5cd2818638d9420e258a588f9a7c4 306 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 203 301 9.2E-32 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS17330 38b5cd2818638d9420e258a588f9a7c4 306 Gene3D G3DSA:3.30.43.10 2 89 1.6E-33 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CLI_RS17330 38b5cd2818638d9420e258a588f9a7c4 306 PANTHER PTHR21071 1 306 2.0E-136 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS17330 38b5cd2818638d9420e258a588f9a7c4 306 SUPERFAMILY SSF56194 199 303 7.85E-38 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS17330 38b5cd2818638d9420e258a588f9a7c4 306 Pfam PF01565 FAD binding domain 39 165 1.4E-24 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CLI_RS17330 38b5cd2818638d9420e258a588f9a7c4 306 SUPERFAMILY SSF56176 7 196 1.26E-48 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLI_RS17330 38b5cd2818638d9420e258a588f9a7c4 306 PANTHER PTHR21071:SF4 1 306 2.0E-136 T 23-04-2016 CLI_RS04950 10c3e6bbc60b0cfebc8507a25e52283f 223 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 195 6.3E-26 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS04950 10c3e6bbc60b0cfebc8507a25e52283f 223 PANTHER PTHR10882 12 125 7.3E-13 T 23-04-2016 CLI_RS04950 10c3e6bbc60b0cfebc8507a25e52283f 223 SUPERFAMILY SSF53790 12 209 8.87E-39 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS04950 10c3e6bbc60b0cfebc8507a25e52283f 223 PANTHER PTHR10882:SF3 12 125 7.3E-13 T 23-04-2016 CLI_RS04950 10c3e6bbc60b0cfebc8507a25e52283f 223 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 15 207 6.4E-61 T 23-04-2016 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 CLI_RS04950 10c3e6bbc60b0cfebc8507a25e52283f 223 Gene3D G3DSA:3.40.1010.10 11 112 1.8E-23 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CLI_RS04950 10c3e6bbc60b0cfebc8507a25e52283f 223 Gene3D G3DSA:3.30.950.10 113 209 1.5E-20 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 CLI_RS12035 78f51b9e1ef100ba5ff55bf98d902e27 87 SUPERFAMILY SSF47060 2 87 9.71E-38 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 CLI_RS12035 78f51b9e1ef100ba5ff55bf98d902e27 87 ProSitePatterns PS00362 Ribosomal protein S15 signature. 37 67 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12035 78f51b9e1ef100ba5ff55bf98d902e27 87 Gene3D G3DSA:1.10.287.10 2 87 4.7E-42 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 CLI_RS12035 78f51b9e1ef100ba5ff55bf98d902e27 87 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 8 86 2.0E-33 T 23-04-2016 CLI_RS12035 78f51b9e1ef100ba5ff55bf98d902e27 87 SMART SM01387 6 86 1.3E-55 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12035 78f51b9e1ef100ba5ff55bf98d902e27 87 PANTHER PTHR23321 1 86 1.1E-46 T 23-04-2016 CLI_RS12035 78f51b9e1ef100ba5ff55bf98d902e27 87 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 87 2.4E-39 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 CLI_RS12035 78f51b9e1ef100ba5ff55bf98d902e27 87 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 87 23.123 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 CLI_RS12035 78f51b9e1ef100ba5ff55bf98d902e27 87 Pfam PF00312 Ribosomal protein S15 6 86 1.0E-39 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS15610 7fbeb7ed1e5f6c80292cdf67cc0d13a5 259 PANTHER PTHR12029 1 258 2.9E-61 T 23-04-2016 CLI_RS15610 7fbeb7ed1e5f6c80292cdf67cc0d13a5 259 SMART SM00967 29 104 1.2E-11 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CLI_RS15610 7fbeb7ed1e5f6c80292cdf67cc0d13a5 259 SUPERFAMILY SSF55315 1 100 9.42E-22 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CLI_RS15610 7fbeb7ed1e5f6c80292cdf67cc0d13a5 259 Gene3D G3DSA:3.40.1280.10 109 257 6.5E-44 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLI_RS15610 7fbeb7ed1e5f6c80292cdf67cc0d13a5 259 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 29 98 6.3E-11 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CLI_RS15610 7fbeb7ed1e5f6c80292cdf67cc0d13a5 259 Pfam PF00588 SpoU rRNA Methylase family 112 250 4.3E-33 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CLI_RS15610 7fbeb7ed1e5f6c80292cdf67cc0d13a5 259 SUPERFAMILY SSF75217 107 257 1.83E-38 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CLI_RS15610 7fbeb7ed1e5f6c80292cdf67cc0d13a5 259 Gene3D G3DSA:3.30.1330.30 1 101 9.6E-26 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CLI_RS18360 4ec473a544283f36ff60359f80aaafca 632 SUPERFAMILY SSF55931 465 533 4.51E-60 T 23-04-2016 CLI_RS18360 4ec473a544283f36ff60359f80aaafca 632 SUPERFAMILY SSF55931 127 438 4.51E-60 T 23-04-2016 CLI_RS18360 4ec473a544283f36ff60359f80aaafca 632 SMART SM01230 150 429 1.4E-39 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLI_RS18360 4ec473a544283f36ff60359f80aaafca 632 PANTHER PTHR20852 255 438 3.1E-62 T 23-04-2016 CLI_RS18360 4ec473a544283f36ff60359f80aaafca 632 PANTHER PTHR20852 3 126 3.1E-62 T 23-04-2016 CLI_RS18360 4ec473a544283f36ff60359f80aaafca 632 PANTHER PTHR20852 147 239 3.1E-62 T 23-04-2016 CLI_RS18360 4ec473a544283f36ff60359f80aaafca 632 Gene3D G3DSA:3.30.590.10 130 526 1.3E-72 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 CLI_RS18360 4ec473a544283f36ff60359f80aaafca 632 Pfam PF00120 Glutamine synthetase, catalytic domain 168 450 3.0E-37 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLI_RS18360 4ec473a544283f36ff60359f80aaafca 632 PANTHER PTHR20852:SF7 255 438 3.1E-62 T 23-04-2016 CLI_RS18360 4ec473a544283f36ff60359f80aaafca 632 PANTHER PTHR20852:SF7 3 126 3.1E-62 T 23-04-2016 CLI_RS18360 4ec473a544283f36ff60359f80aaafca 632 PANTHER PTHR20852:SF7 147 239 3.1E-62 T 23-04-2016 CLI_RS11495 1c5430ed96ac6b9ba766bd9f89557270 487 Gene3D G3DSA:3.40.605.10 12 273 2.3E-91 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CLI_RS11495 1c5430ed96ac6b9ba766bd9f89557270 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CLI_RS11495 1c5430ed96ac6b9ba766bd9f89557270 487 SUPERFAMILY SSF53720 10 484 1.22E-151 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CLI_RS11495 1c5430ed96ac6b9ba766bd9f89557270 487 Gene3D G3DSA:3.40.309.10 274 454 2.5E-66 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLI_RS11495 1c5430ed96ac6b9ba766bd9f89557270 487 Pfam PF00171 Aldehyde dehydrogenase family 20 479 4.7E-160 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CLI_RS11495 1c5430ed96ac6b9ba766bd9f89557270 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CLI_RS11495 1c5430ed96ac6b9ba766bd9f89557270 487 PANTHER PTHR11699:SF160 12 487 1.2E-284 T 23-04-2016 CLI_RS11495 1c5430ed96ac6b9ba766bd9f89557270 487 PANTHER PTHR11699 12 487 1.2E-284 T 23-04-2016 CLI_RS10715 8654ee9526144b0244faf9e22e69ff4a 361 Gene3D G3DSA:3.50.50.60 263 300 6.5E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS10715 8654ee9526144b0244faf9e22e69ff4a 361 Gene3D G3DSA:3.50.50.60 2 171 6.5E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS10715 8654ee9526144b0244faf9e22e69ff4a 361 PANTHER PTHR10617:SF101 1 351 1.2E-79 T 23-04-2016 CLI_RS10715 8654ee9526144b0244faf9e22e69ff4a 361 PANTHER PTHR10617 1 351 1.2E-79 T 23-04-2016 CLI_RS10715 8654ee9526144b0244faf9e22e69ff4a 361 SUPERFAMILY SSF51905 4 168 8.34E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS10715 8654ee9526144b0244faf9e22e69ff4a 361 SUPERFAMILY SSF51905 261 322 8.34E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS10715 8654ee9526144b0244faf9e22e69ff4a 361 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 265 280 1.1E-14 T 23-04-2016 CLI_RS10715 8654ee9526144b0244faf9e22e69ff4a 361 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 296 1.1E-14 T 23-04-2016 CLI_RS10715 8654ee9526144b0244faf9e22e69ff4a 361 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.1E-14 T 23-04-2016 CLI_RS10715 8654ee9526144b0244faf9e22e69ff4a 361 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 1.1E-14 T 23-04-2016 CLI_RS04560 55b0e69248bd764c9422ec53a03aa362 79 Gene3D G3DSA:3.40.50.1000 12 76 8.9E-14 T 23-04-2016 IPR023214 HAD-like domain CLI_RS04560 55b0e69248bd764c9422ec53a03aa362 79 Pfam PF13242 HAD-hyrolase-like 13 49 6.6E-5 T 23-04-2016 CLI_RS04560 55b0e69248bd764c9422ec53a03aa362 79 SUPERFAMILY SSF56784 21 72 7.64E-10 T 23-04-2016 IPR023214 HAD-like domain CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 Gene3D G3DSA:3.40.50.300 95 371 2.9E-118 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 PANTHER PTHR15184:SF3 1 485 3.7E-302 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 SUPERFAMILY SSF47917 372 500 8.37E-47 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 Gene3D G3DSA:2.40.30.20 1 93 3.5E-36 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 Gene3D G3DSA:1.20.150.20 372 500 1.8E-53 T 23-04-2016 CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 500 2.4E-254 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 PANTHER PTHR15184 1 485 3.7E-302 T 23-04-2016 CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 SUPERFAMILY SSF50615 10 94 2.35E-29 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 2.9E-73 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 PIRSF PIRSF039088 1 503 1.0E-256 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 91 5.7E-17 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 501 51.988 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 SUPERFAMILY SSF52540 96 370 6.2E-101 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00910 9625d1a7ac560eb1546432dc7a743baa 504 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 496 6.0E-50 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS10970 e1b7b268b00c844c7905a9fd5eed524d 261 Pfam PF01012 Electron transfer flavoprotein domain 23 208 1.0E-53 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS10970 e1b7b268b00c844c7905a9fd5eed524d 261 SUPERFAMILY SSF52402 1 256 1.47E-83 T 23-04-2016 CLI_RS10970 e1b7b268b00c844c7905a9fd5eed524d 261 SMART SM00893 22 213 3.0E-67 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS10970 e1b7b268b00c844c7905a9fd5eed524d 261 PANTHER PTHR21294:SF0 1 261 2.9E-128 T 23-04-2016 CLI_RS10970 e1b7b268b00c844c7905a9fd5eed524d 261 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 157 177 - T 23-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 CLI_RS10970 e1b7b268b00c844c7905a9fd5eed524d 261 PIRSF PIRSF000090 1 261 8.1E-98 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 CLI_RS10970 e1b7b268b00c844c7905a9fd5eed524d 261 PANTHER PTHR21294 1 261 2.9E-128 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 CLI_RS10970 e1b7b268b00c844c7905a9fd5eed524d 261 Gene3D G3DSA:3.40.50.620 1 260 5.0E-100 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00940 4fac638aaa2436eadca0b4d324c36915 358 PANTHER PTHR30032:SF4 53 357 9.5E-69 T 23-04-2016 CLI_RS00940 4fac638aaa2436eadca0b4d324c36915 358 PANTHER PTHR30032 53 357 9.5E-69 T 23-04-2016 CLI_RS00940 4fac638aaa2436eadca0b4d324c36915 358 Pfam PF08486 Stage II sporulation protein 81 185 3.1E-27 T 23-04-2016 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal CLI_RS00940 4fac638aaa2436eadca0b4d324c36915 358 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 14 352 1.4E-113 T 23-04-2016 IPR014225 Sporulation stage II, protein D firmicutes CLI_RS00940 4fac638aaa2436eadca0b4d324c36915 358 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 82 351 7.3E-78 T 23-04-2016 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 CLI_RS01790 e282ae8315653154b3acf1664f5c6519 230 SUPERFAMILY SSF46894 129 227 9.07E-23 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS01790 e282ae8315653154b3acf1664f5c6519 230 SUPERFAMILY SSF52172 2 123 1.57E-34 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS01790 e282ae8315653154b3acf1664f5c6519 230 PANTHER PTHR26402:SF519 3 230 2.6E-136 T 23-04-2016 CLI_RS01790 e282ae8315653154b3acf1664f5c6519 230 PANTHER PTHR26402 3 230 2.6E-136 T 23-04-2016 CLI_RS01790 e282ae8315653154b3acf1664f5c6519 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 5.6E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS01790 e282ae8315653154b3acf1664f5c6519 230 Gene3D G3DSA:3.40.50.2300 2 121 1.2E-33 T 23-04-2016 CLI_RS01790 e282ae8315653154b3acf1664f5c6519 230 SMART SM00862 151 226 5.4E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS01790 e282ae8315653154b3acf1664f5c6519 230 Pfam PF00072 Response regulator receiver domain 5 113 1.4E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01790 e282ae8315653154b3acf1664f5c6519 230 Gene3D G3DSA:1.10.10.10 129 227 4.5E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01790 e282ae8315653154b3acf1664f5c6519 230 SMART SM00448 3 113 2.4E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS12210 66a59418ccfea3018920df3175f7827e 75 PANTHER PTHR34654 1 75 2.4E-29 T 23-04-2016 CLI_RS12210 66a59418ccfea3018920df3175f7827e 75 Pfam PF13083 KH domain 2 74 9.5E-25 T 23-04-2016 CLI_RS12210 66a59418ccfea3018920df3175f7827e 75 SUPERFAMILY SSF54814 6 61 3.2E-8 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CLI_RS12210 66a59418ccfea3018920df3175f7827e 75 Gene3D G3DSA:3.30.300.120 14 72 6.4E-6 T 23-04-2016 CLI_RS12210 66a59418ccfea3018920df3175f7827e 75 Hamap MF_00088 UPF0109 protein . 1 75 23.746 T 23-04-2016 IPR020627 Uncharacterised protein family UPF0109 CLI_RS02605 dc946e299bf117a7ae3efebf4ab4f11e 409 Pfam PF00149 Calcineurin-like phosphoesterase 1 240 8.0E-14 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CLI_RS02605 dc946e299bf117a7ae3efebf4ab4f11e 409 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 293 379 2.4E-6 T 23-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CLI_RS02605 dc946e299bf117a7ae3efebf4ab4f11e 409 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 269 8.4E-54 T 23-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 CLI_RS02605 dc946e299bf117a7ae3efebf4ab4f11e 409 Gene3D G3DSA:3.60.21.10 1 287 5.3E-65 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS02605 dc946e299bf117a7ae3efebf4ab4f11e 409 PANTHER PTHR30337:SF0 1 406 2.8E-120 T 23-04-2016 CLI_RS02605 dc946e299bf117a7ae3efebf4ab4f11e 409 PANTHER PTHR30337 1 406 2.8E-120 T 23-04-2016 CLI_RS02605 dc946e299bf117a7ae3efebf4ab4f11e 409 SUPERFAMILY SSF56300 1 348 1.42E-54 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS05205 617f61831109e985297c745b23190cf1 709 SMART SM00956 406 509 5.1E-44 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 CLI_RS05205 617f61831109e985297c745b23190cf1 709 Gene3D G3DSA:1.10.150.80 515 591 6.4E-26 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 CLI_RS05205 617f61831109e985297c745b23190cf1 709 Pfam PF09382 RQC domain 402 512 2.6E-34 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 CLI_RS05205 617f61831109e985297c745b23190cf1 709 PANTHER PTHR13710:SF81 1 611 3.3E-286 T 23-04-2016 CLI_RS05205 617f61831109e985297c745b23190cf1 709 Pfam PF00271 Helicase conserved C-terminal domain 218 324 6.1E-19 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS05205 617f61831109e985297c745b23190cf1 709 Gene3D G3DSA:1.10.10.10 337 513 3.3E-56 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05205 617f61831109e985297c745b23190cf1 709 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 456 1.6E-150 T 23-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CLI_RS05205 617f61831109e985297c745b23190cf1 709 Pfam PF16124 RecQ zinc-binding 336 398 8.3E-16 T 23-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CLI_RS05205 617f61831109e985297c745b23190cf1 709 SMART SM00487 14 211 9.1E-30 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS05205 617f61831109e985297c745b23190cf1 709 SMART SM00341 514 594 1.5E-16 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 CLI_RS05205 617f61831109e985297c745b23190cf1 709 Gene3D G3DSA:3.40.50.300 5 196 1.0E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05205 617f61831109e985297c745b23190cf1 709 SUPERFAMILY SSF47819 516 598 4.8E-24 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CLI_RS05205 617f61831109e985297c745b23190cf1 709 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 587 1.4E-234 T 23-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CLI_RS05205 617f61831109e985297c745b23190cf1 709 Pfam PF00570 HRDC domain 518 584 6.9E-23 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 CLI_RS05205 617f61831109e985297c745b23190cf1 709 SUPERFAMILY SSF46785 397 539 7.48E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05205 617f61831109e985297c745b23190cf1 709 Gene3D G3DSA:3.40.50.300 200 336 7.7E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05205 617f61831109e985297c745b23190cf1 709 SUPERFAMILY SSF52540 58 345 6.21E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05205 617f61831109e985297c745b23190cf1 709 Pfam PF00270 DEAD/DEAH box helicase 20 182 2.6E-20 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLI_RS05205 617f61831109e985297c745b23190cf1 709 SMART SM00490 243 324 1.2E-27 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS05205 617f61831109e985297c745b23190cf1 709 Pfam PF14493 Helix-turn-helix domain 614 701 2.7E-23 T 23-04-2016 IPR029491 Helicase Helix-turn-helix domain CLI_RS05205 617f61831109e985297c745b23190cf1 709 PANTHER PTHR13710 1 611 3.3E-286 T 23-04-2016 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 321 4.6E-106 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 5.7E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 5.7E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 5.7E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 5.7E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 5.7E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 Gene3D G3DSA:1.10.10.350 376 475 3.8E-23 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 Gene3D G3DSA:3.40.50.620 196 245 8.4E-48 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 Gene3D G3DSA:3.40.50.620 4 70 8.4E-48 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 PANTHER PTHR11451:SF26 3 340 5.8E-112 T 23-04-2016 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 476 2.9E-162 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 SUPERFAMILY SSF48163 315 478 2.75E-35 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 SUPERFAMILY SSF52374 4 314 2.95E-112 T 23-04-2016 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 PANTHER PTHR11451 3 340 5.8E-112 T 23-04-2016 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 478 31.479 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 Gene3D G3DSA:1.10.1160.10 248 330 4.9E-34 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS05740 8e6ee26e13cfd6525287ddd8f27bda7e 485 Gene3D G3DSA:3.90.800.10 71 195 1.3E-42 T 23-04-2016 CLI_RS10770 4ef5cfa97f92c826e62b870a2f29da9c 94 PANTHER PTHR33843 1 94 2.4E-41 T 23-04-2016 CLI_RS10770 4ef5cfa97f92c826e62b870a2f29da9c 94 Gene3D G3DSA:3.40.50.270 2 86 2.8E-19 T 23-04-2016 CLI_RS10770 4ef5cfa97f92c826e62b870a2f29da9c 94 PANTHER PTHR33843:SF2 1 94 2.4E-41 T 23-04-2016 CLI_RS10770 4ef5cfa97f92c826e62b870a2f29da9c 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 75 1.6E-16 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLI_RS10770 4ef5cfa97f92c826e62b870a2f29da9c 94 SUPERFAMILY SSF52794 1 87 4.45E-22 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 SUPERFAMILY SSF52518 787 1170 1.63E-135 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 1.2E-31 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 SUPERFAMILY SSF52922 259 414 3.93E-49 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 SUPERFAMILY SSF52518 5 258 1.59E-79 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 SUPERFAMILY SSF54862 665 832 1.99E-21 T 23-04-2016 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 374 1.6E-16 T 23-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 Pfam PF12838 4Fe-4S dicluster domain 688 757 1.0E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 PIRSF PIRSF000159 1 1172 0.0 T 23-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 Gene3D G3DSA:3.40.50.920 259 414 1.4E-62 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 PANTHER PTHR32154:SF0 3 1172 0.0 T 23-04-2016 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 Gene3D G3DSA:3.30.70.20 672 780 3.8E-20 T 23-04-2016 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 247 1.9E-80 T 23-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 Gene3D G3DSA:3.40.50.970 3 258 7.6E-113 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 Gene3D G3DSA:4.10.780.10 627 668 2.6E-18 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1171 0.0 T 23-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 Pfam PF10371 Domain of unknown function 625 678 4.3E-24 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 SMART SM00890 621 679 2.1E-31 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 Gene3D G3DSA:3.40.920.10 416 624 9.0E-90 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 959 1069 1.7E-9 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 PANTHER PTHR32154 3 1172 0.0 T 23-04-2016 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 SUPERFAMILY SSF53323 415 668 9.94E-89 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLI_RS06190 97a6ca7accf65c3d4fd8044fa8a7d7fc 1172 Gene3D G3DSA:3.40.50.970 787 1171 2.4E-155 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 ProSitePatterns PS00756 Protein secY signature 2. 162 179 - T 23-04-2016 IPR030659 SecY conserved site CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 PANTHER PTHR10906 1 425 3.6E-187 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 419 1.3E-115 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 424 28.723 T 23-04-2016 IPR026593 Protein translocase subunit SecY CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 23-04-2016 IPR030659 SecY conserved site CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 143 168 1.6E-83 T 23-04-2016 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 393 411 1.6E-83 T 23-04-2016 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 261 280 1.6E-83 T 23-04-2016 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 1.6E-83 T 23-04-2016 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 305 327 1.6E-83 T 23-04-2016 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 1.6E-83 T 23-04-2016 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 360 378 1.6E-83 T 23-04-2016 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 169 192 1.6E-83 T 23-04-2016 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 1.6E-83 T 23-04-2016 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 PANTHER PTHR10906:SF2 1 425 3.6E-187 T 23-04-2016 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 PIRSF PIRSF004557 1 425 4.4E-119 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 SUPERFAMILY SSF103491 1 415 8.89E-119 T 23-04-2016 IPR023201 SecY subunit domain CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 Gene3D G3DSA:1.10.3370.10 1 425 2.9E-148 T 23-04-2016 IPR023201 SecY subunit domain CLI_RS17740 803beb419a7ebdb62adeef407b43050d 425 Pfam PF00344 SecY translocase 69 408 4.6E-109 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CLI_RS13090 cc4af79f457e05f89b032bbdc5cb8e39 324 SUPERFAMILY SSF52821 198 323 4.58E-31 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS13090 cc4af79f457e05f89b032bbdc5cb8e39 324 ProSitePatterns PS00380 Rhodanese signature 1. 83 94 - T 23-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CLI_RS13090 cc4af79f457e05f89b032bbdc5cb8e39 324 Gene3D G3DSA:3.40.250.10 54 195 4.5E-36 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS13090 cc4af79f457e05f89b032bbdc5cb8e39 324 Gene3D G3DSA:3.40.250.10 201 323 5.0E-33 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS13090 cc4af79f457e05f89b032bbdc5cb8e39 324 Pfam PF00581 Rhodanese-like domain 61 175 1.3E-20 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS13090 cc4af79f457e05f89b032bbdc5cb8e39 324 Pfam PF00581 Rhodanese-like domain 205 316 3.6E-17 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS13090 cc4af79f457e05f89b032bbdc5cb8e39 324 PANTHER PTHR11364:SF3 41 324 5.9E-107 T 23-04-2016 CLI_RS13090 cc4af79f457e05f89b032bbdc5cb8e39 324 PANTHER PTHR11364 41 324 5.9E-107 T 23-04-2016 CLI_RS13090 cc4af79f457e05f89b032bbdc5cb8e39 324 SUPERFAMILY SSF52821 52 194 1.31E-29 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS13090 cc4af79f457e05f89b032bbdc5cb8e39 324 SMART SM00450 58 179 8.8E-19 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS13090 cc4af79f457e05f89b032bbdc5cb8e39 324 SMART SM00450 201 320 2.9E-20 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS07710 ef2df87f328e3fd135b94bf28c7fecb4 320 Pfam PF09383 NIL domain 260 317 2.6E-5 T 23-04-2016 IPR018449 NIL domain CLI_RS07710 ef2df87f328e3fd135b94bf28c7fecb4 320 SUPERFAMILY SSF52540 1 227 2.97E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07710 ef2df87f328e3fd135b94bf28c7fecb4 320 SMART SM00382 26 230 5.8E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS07710 ef2df87f328e3fd135b94bf28c7fecb4 320 Gene3D G3DSA:3.30.70.260 246 320 1.8E-5 T 23-04-2016 CLI_RS07710 ef2df87f328e3fd135b94bf28c7fecb4 320 PANTHER PTHR24220:SF549 3 260 1.4E-153 T 23-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 CLI_RS07710 ef2df87f328e3fd135b94bf28c7fecb4 320 Gene3D G3DSA:3.40.50.300 1 227 1.1E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07710 ef2df87f328e3fd135b94bf28c7fecb4 320 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07710 ef2df87f328e3fd135b94bf28c7fecb4 320 SUPERFAMILY SSF55021 244 319 1.49E-6 T 23-04-2016 CLI_RS07710 ef2df87f328e3fd135b94bf28c7fecb4 320 SMART SM00930 247 320 1.2E-4 T 23-04-2016 IPR018449 NIL domain CLI_RS07710 ef2df87f328e3fd135b94bf28c7fecb4 320 PANTHER PTHR24220 3 260 1.4E-153 T 23-04-2016 CLI_RS07710 ef2df87f328e3fd135b94bf28c7fecb4 320 Pfam PF00005 ABC transporter 17 165 3.0E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS11560 253b859bb10b71ffea47de221d4bc066 450 TIGRFAM TIGR00277 HDIG: HDIG domain 245 323 1.2E-7 T 23-04-2016 IPR006675 HDIG domain CLI_RS11560 253b859bb10b71ffea47de221d4bc066 450 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 302 446 9.9E-12 T 23-04-2016 IPR032810 CCA-adding enzyme, C-terminal CLI_RS11560 253b859bb10b71ffea47de221d4bc066 450 Gene3D G3DSA:3.30.460.10 9 152 4.3E-48 T 23-04-2016 CLI_RS11560 253b859bb10b71ffea47de221d4bc066 450 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 179 239 9.6E-16 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CLI_RS11560 253b859bb10b71ffea47de221d4bc066 450 PANTHER PTHR13734 12 450 6.7E-110 T 23-04-2016 CLI_RS11560 253b859bb10b71ffea47de221d4bc066 450 SUPERFAMILY SSF81301 6 149 2.29E-41 T 23-04-2016 CLI_RS11560 253b859bb10b71ffea47de221d4bc066 450 Gene3D G3DSA:1.10.3090.10 397 418 1.7E-56 T 23-04-2016 CLI_RS11560 253b859bb10b71ffea47de221d4bc066 450 Gene3D G3DSA:1.10.3090.10 153 333 1.7E-56 T 23-04-2016 CLI_RS11560 253b859bb10b71ffea47de221d4bc066 450 Pfam PF01743 Poly A polymerase head domain 28 152 1.6E-37 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 CLI_RS11560 253b859bb10b71ffea47de221d4bc066 450 SUPERFAMILY SSF81891 150 449 4.32E-55 T 23-04-2016 CLI_RS11560 253b859bb10b71ffea47de221d4bc066 450 PANTHER PTHR13734:SF5 12 450 6.7E-110 T 23-04-2016 CLI_RS11560 253b859bb10b71ffea47de221d4bc066 450 SMART SM00471 251 380 0.0044 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS09145 956a59969ffbcc1e7ffdc93da4b2ee1f 271 Gene3D G3DSA:3.40.50.1580 3 269 2.6E-110 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLI_RS09145 956a59969ffbcc1e7ffdc93da4b2ee1f 271 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 22 268 2.5E-108 T 23-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 CLI_RS09145 956a59969ffbcc1e7ffdc93da4b2ee1f 271 PIRSF PIRSF000477 2 271 5.7E-112 T 23-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 CLI_RS09145 956a59969ffbcc1e7ffdc93da4b2ee1f 271 SUPERFAMILY SSF53167 3 271 1.96E-96 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLI_RS09145 956a59969ffbcc1e7ffdc93da4b2ee1f 271 Pfam PF01048 Phosphorylase superfamily 23 268 6.7E-57 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLI_RS09145 956a59969ffbcc1e7ffdc93da4b2ee1f 271 PANTHER PTHR11904:SF9 1 271 5.8E-138 T 23-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 CLI_RS09145 956a59969ffbcc1e7ffdc93da4b2ee1f 271 PANTHER PTHR11904 1 271 5.8E-138 T 23-04-2016 IPR001369 PNP/MTAP phosphorylase CLI_RS09145 956a59969ffbcc1e7ffdc93da4b2ee1f 271 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 22 268 3.1E-111 T 23-04-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 SUPERFAMILY SSF53623 96 312 9.68E-62 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 Gene3D G3DSA:3.40.50.720 11 97 2.8E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 Pfam PF08245 Mur ligase middle domain 116 294 1.9E-33 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 SUPERFAMILY SSF51984 10 97 1.22E-27 T 23-04-2016 CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 Gene3D G3DSA:3.40.1190.10 99 316 1.3E-70 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 PANTHER PTHR23135 5 448 4.1E-196 T 23-04-2016 CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 12 453 3.3E-147 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 Gene3D G3DSA:3.90.190.20 317 456 2.8E-51 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 Pfam PF01225 Mur ligase family, catalytic domain 12 110 7.5E-26 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 SUPERFAMILY SSF53244 314 456 1.44E-45 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 10 458 39.115 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 398 7.0E-23 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS18280 5b50f42dee8f3f329207dbb198c2a21e 458 PANTHER PTHR23135:SF5 5 448 4.1E-196 T 23-04-2016 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 PANTHER PTHR22912 1 442 3.4E-194 T 23-04-2016 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 Gene3D G3DSA:3.40.1260.10 660 817 1.8E-58 T 23-04-2016 IPR027396 DsrEFH-like CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 Gene3D G3DSA:3.30.390.30 338 440 9.0E-39 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 SMART SM00450 454 548 2.1E-15 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 SUPERFAMILY SSF52821 433 543 2.36E-24 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 SUPERFAMILY SSF75169 759 811 1.77E-20 T 23-04-2016 IPR027396 DsrEFH-like CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 SUPERFAMILY SSF75169 666 709 1.77E-20 T 23-04-2016 IPR027396 DsrEFH-like CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 SUPERFAMILY SSF55424 325 447 4.64E-29 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 576 600 - T 23-04-2016 IPR001455 TusA-like domain CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 7.7E-16 T 23-04-2016 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 7.7E-16 T 23-04-2016 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 7.7E-16 T 23-04-2016 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 7.7E-16 T 23-04-2016 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 Pfam PF01206 Sulfurtransferase TusA 575 643 3.4E-19 T 23-04-2016 IPR001455 TusA-like domain CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 309 5.7E-64 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 Pfam PF13686 DsrE/DsrF/DrsH-like family 664 816 1.6E-64 T 23-04-2016 IPR032836 DsrE/DsrF/DrsH-like family CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 SUPERFAMILY SSF51905 1 318 1.3E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 Gene3D G3DSA:3.50.50.60 111 317 2.3E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 PANTHER PTHR22912:SF140 1 442 3.4E-194 T 23-04-2016 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 Gene3D G3DSA:3.30.110.40 570 644 1.5E-27 T 23-04-2016 IPR001455 TusA-like domain CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 Gene3D G3DSA:3.50.50.60 1 110 6.9E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 6.6E-28 T 23-04-2016 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 6.6E-28 T 23-04-2016 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 6.6E-28 T 23-04-2016 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 6.6E-28 T 23-04-2016 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 6.6E-28 T 23-04-2016 CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 SUPERFAMILY SSF64307 571 644 3.66E-19 T 23-04-2016 IPR001455 TusA-like domain CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 Gene3D G3DSA:3.40.250.10 441 544 1.4E-24 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 Pfam PF00581 Rhodanese-like domain 461 542 4.4E-11 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS01070 2ffaf40460a9cc315659f1adf9708099 817 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 335 432 4.8E-9 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLI_RS16210 23d11dcb6e88247f7863be253440c717 189 PANTHER PTHR10245 1 189 1.1E-74 T 23-04-2016 CLI_RS16210 23d11dcb6e88247f7863be253440c717 189 PANTHER PTHR10245:SF53 1 189 1.1E-74 T 23-04-2016 CLI_RS16210 23d11dcb6e88247f7863be253440c717 189 Gene3D G3DSA:1.10.260.40 5 103 8.1E-23 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS16210 23d11dcb6e88247f7863be253440c717 189 SUPERFAMILY SSF47413 3 67 5.35E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS16210 23d11dcb6e88247f7863be253440c717 189 Pfam PF01381 Helix-turn-helix 9 63 3.8E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS16210 23d11dcb6e88247f7863be253440c717 189 Gene3D G3DSA:2.60.120.10 104 185 1.8E-23 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS16210 23d11dcb6e88247f7863be253440c717 189 SMART SM00530 8 63 1.5E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS16210 23d11dcb6e88247f7863be253440c717 189 SUPERFAMILY SSF51182 56 184 4.46E-23 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS16210 23d11dcb6e88247f7863be253440c717 189 Pfam PF07883 Cupin domain 122 178 2.8E-13 T 23-04-2016 IPR013096 Cupin 2, conserved barrel CLI_RS06360 ff65681d57d7f1353b87cfae0ed5e48f 532 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 93 115 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site CLI_RS06360 ff65681d57d7f1353b87cfae0ed5e48f 532 Gene3D G3DSA:3.40.190.10 205 305 4.7E-33 T 23-04-2016 CLI_RS06360 ff65681d57d7f1353b87cfae0ed5e48f 532 PANTHER PTHR30290 1 522 1.6E-161 T 23-04-2016 CLI_RS06360 ff65681d57d7f1353b87cfae0ed5e48f 532 PIRSF PIRSF002741 1 528 3.4E-110 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLI_RS06360 ff65681d57d7f1353b87cfae0ed5e48f 532 Gene3D G3DSA:3.10.105.10 306 496 2.7E-47 T 23-04-2016 CLI_RS06360 ff65681d57d7f1353b87cfae0ed5e48f 532 Gene3D G3DSA:3.90.76.10 55 204 1.0E-35 T 23-04-2016 CLI_RS06360 ff65681d57d7f1353b87cfae0ed5e48f 532 SUPERFAMILY SSF53850 42 517 5.61E-118 T 23-04-2016 CLI_RS06360 ff65681d57d7f1353b87cfae0ed5e48f 532 PANTHER PTHR30290:SF9 1 522 1.6E-161 T 23-04-2016 CLI_RS06360 ff65681d57d7f1353b87cfae0ed5e48f 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 91 449 4.1E-84 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain CLI_RS00185 3a7eca5677d8427a82419353496673a2 113 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 12 106 22.368 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLI_RS00185 3a7eca5677d8427a82419353496673a2 113 Pfam PF02575 YbaB/EbfC DNA-binding family 18 108 5.0E-33 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLI_RS00185 3a7eca5677d8427a82419353496673a2 113 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 13 112 1.9E-27 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLI_RS00185 3a7eca5677d8427a82419353496673a2 113 Gene3D G3DSA:3.30.1310.10 8 113 1.5E-38 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLI_RS00185 3a7eca5677d8427a82419353496673a2 113 PANTHER PTHR33449 4 113 3.0E-45 T 23-04-2016 CLI_RS00185 3a7eca5677d8427a82419353496673a2 113 PANTHER PTHR33449:SF1 4 113 3.0E-45 T 23-04-2016 CLI_RS00185 3a7eca5677d8427a82419353496673a2 113 PIRSF PIRSF004555 10 113 5.1E-38 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLI_RS00185 3a7eca5677d8427a82419353496673a2 113 SUPERFAMILY SSF82607 18 112 1.83E-30 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 SMART SM01231 318 378 1.3E-19 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 SUPERFAMILY SSF50341 561 691 1.7E-30 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 SUPERFAMILY SSF47226 3 125 9.42E-33 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 Gene3D G3DSA:2.30.30.40 647 691 4.0E-19 T 23-04-2016 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 Gene3D G3DSA:2.30.30.40 562 583 4.0E-19 T 23-04-2016 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 PANTHER PTHR22617:SF6 1 691 8.1E-282 T 23-04-2016 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 Gene3D G3DSA:1.10.287.560 319 379 8.5E-22 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 SUPERFAMILY SSF47384 319 379 9.42E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 SMART SM00260 554 691 2.3E-34 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 Gene3D G3DSA:3.30.565.10 380 561 1.3E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 482 1.4E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 540 1.4E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 559 1.4E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 Pfam PF01627 Hpt domain 6 100 3.3E-20 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 PANTHER PTHR22617 1 691 8.1E-282 T 23-04-2016 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 SMART SM00387 423 562 2.8E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 Gene3D G3DSA:3.30.70.1110 169 252 1.1E-31 T 23-04-2016 IPR010808 Signal transduction histidine kinase, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 SUPERFAMILY SSF55052 169 252 6.8E-25 T 23-04-2016 IPR015162 CheY binding CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 Pfam PF01584 CheW-like domain 566 690 8.1E-26 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 427 561 2.0E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 Gene3D G3DSA:1.20.120.160 2 133 2.8E-42 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 Gene3D G3DSA:2.40.50.180 586 646 1.5E-15 T 23-04-2016 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 SMART SM00073 3 100 9.5E-32 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 Pfam PF07194 P2 response regulator binding domain 172 250 2.3E-26 T 23-04-2016 IPR010808 Signal transduction histidine kinase, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 319 378 5.8E-16 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLI_RS13660 47ffb54d94cfb0a83ce2059dafa87f4d 691 SUPERFAMILY SSF55874 381 560 3.8E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS18230 386de21768f710c30c142a15b7048e85 336 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 223 244 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CLI_RS18230 386de21768f710c30c142a15b7048e85 336 Pfam PF13624 SurA N-terminal domain 4 164 1.0E-20 T 23-04-2016 CLI_RS18230 386de21768f710c30c142a15b7048e85 336 PANTHER PTHR10657 36 335 1.7E-74 T 23-04-2016 CLI_RS18230 386de21768f710c30c142a15b7048e85 336 Hamap MF_01145 Foldase protein PrsA [prsA]. 5 336 16.563 T 23-04-2016 IPR023059 Foldase protein PrsA GO:0003755 CLI_RS18230 386de21768f710c30c142a15b7048e85 336 SUPERFAMILY SSF54534 194 289 4.08E-25 T 23-04-2016 CLI_RS18230 386de21768f710c30c142a15b7048e85 336 SUPERFAMILY SSF109998 36 224 1.84E-32 T 23-04-2016 IPR027304 Trigger factor/SurA domain CLI_RS18230 386de21768f710c30c142a15b7048e85 336 Pfam PF13145 PPIC-type PPIASE domain 174 300 4.7E-22 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CLI_RS18230 386de21768f710c30c142a15b7048e85 336 PANTHER PTHR10657:SF11 36 335 1.7E-74 T 23-04-2016 CLI_RS18230 386de21768f710c30c142a15b7048e85 336 Gene3D G3DSA:3.10.50.40 192 312 1.6E-36 T 23-04-2016 CLI_RS01965 6df147848ccccf344c7c8528203c984a 228 SUPERFAMILY SSF52172 3 176 7.62E-41 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS01965 6df147848ccccf344c7c8528203c984a 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 3.0E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS01965 6df147848ccccf344c7c8528203c984a 228 PANTHER PTHR26402:SF603 2 227 2.3E-102 T 23-04-2016 CLI_RS01965 6df147848ccccf344c7c8528203c984a 228 PANTHER PTHR26402 2 227 2.3E-102 T 23-04-2016 CLI_RS01965 6df147848ccccf344c7c8528203c984a 228 Gene3D G3DSA:3.40.50.2300 3 125 9.5E-40 T 23-04-2016 CLI_RS01965 6df147848ccccf344c7c8528203c984a 228 Pfam PF00072 Response regulator receiver domain 4 113 2.0E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01965 6df147848ccccf344c7c8528203c984a 228 SMART SM00448 2 113 1.5E-41 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01965 6df147848ccccf344c7c8528203c984a 228 Gene3D G3DSA:1.10.10.10 126 226 4.1E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01965 6df147848ccccf344c7c8528203c984a 228 SMART SM00862 149 225 5.3E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 Gene3D G3DSA:3.40.50.1100 109 202 5.6E-8 T 23-04-2016 CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 PANTHER PTHR10314 52 340 1.2E-133 T 23-04-2016 CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 PANTHER PTHR10314 25 36 1.2E-133 T 23-04-2016 CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 PANTHER PTHR10314 371 480 1.2E-133 T 23-04-2016 CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 Gene3D G3DSA:3.90.1380.10 3 82 1.0E-28 T 23-04-2016 IPR029144 Threonine synthase, N-terminal CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 PANTHER PTHR10314:SF1 52 340 1.2E-133 T 23-04-2016 CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 PANTHER PTHR10314:SF1 25 36 1.2E-133 T 23-04-2016 CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 Pfam PF14821 Threonine synthase N terminus 3 78 1.8E-26 T 23-04-2016 IPR029144 Threonine synthase, N-terminal CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 Gene3D G3DSA:3.40.50.1100 203 442 1.0E-90 T 23-04-2016 CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 PANTHER PTHR10314:SF1 371 480 1.2E-133 T 23-04-2016 CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 TIGRFAM TIGR00260 thrC: threonine synthase 94 437 2.2E-72 T 23-04-2016 IPR004450 Threonine synthase-like CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 420 4.9E-14 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS08400 b2de6b8fe6a5047ba6f1b6eb5054a335 493 SUPERFAMILY SSF53686 2 491 1.31E-139 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 PANTHER PTHR24031 235 269 9.4E-118 T 23-04-2016 CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 PANTHER PTHR24031 286 586 9.4E-118 T 23-04-2016 CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 PANTHER PTHR24031 608 671 9.4E-118 T 23-04-2016 CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 PANTHER PTHR24031 139 209 9.4E-118 T 23-04-2016 CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 PANTHER PTHR24031 26 59 9.4E-118 T 23-04-2016 CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 Pfam PF00270 DEAD/DEAH box helicase 258 414 3.7E-20 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 Pfam PF00271 Helicase conserved C-terminal domain 454 571 1.7E-21 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 SMART SM00490 487 572 8.6E-24 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 PANTHER PTHR24031:SF249 235 269 9.4E-118 T 23-04-2016 CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 PANTHER PTHR24031:SF249 286 586 9.4E-118 T 23-04-2016 CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 PANTHER PTHR24031:SF249 608 671 9.4E-118 T 23-04-2016 CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 PANTHER PTHR24031:SF249 139 209 9.4E-118 T 23-04-2016 CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 PANTHER PTHR24031:SF249 26 59 9.4E-118 T 23-04-2016 CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 Gene3D G3DSA:2.40.50.140 54 138 6.5E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 25 644 1.0E-215 T 23-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 SUPERFAMILY SSF52540 369 629 8.91E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 Pfam PF17191 RecG wedge domain 7 169 9.2E-22 T 23-04-2016 IPR033454 RecG, wedge domain CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 SUPERFAMILY SSF50249 2 169 3.43E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 SMART SM00487 252 442 2.5E-36 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 Gene3D G3DSA:3.40.50.300 437 620 3.0E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 Gene3D G3DSA:3.40.50.300 243 436 1.2E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12480 ac20f2183fa97a8a9ac2d35d45db703e 679 SUPERFAMILY SSF52540 173 436 4.57E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Gene3D G3DSA:3.50.50.60 539 690 1.1E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 PRINTS PR00419 Adrenodoxin reductase family signature 472 485 1.7E-20 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 PRINTS PR00419 Adrenodoxin reductase family signature 449 471 1.7E-20 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 PRINTS PR00419 Adrenodoxin reductase family signature 581 595 1.7E-20 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 PRINTS PR00419 Adrenodoxin reductase family signature 514 524 1.7E-20 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 292 303 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Gene3D G3DSA:3.30.70.20 302 362 9.2E-6 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 355 431 9.1E-21 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Gene3D G3DSA:1.10.1060.10 363 450 5.2E-30 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Gene3D G3DSA:1.10.1060.10 777 822 5.1E-7 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Gene3D G3DSA:1.10.1060.10 843 886 5.8E-4 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Pfam PF00037 4Fe-4S binding domain 286 307 5.4E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Pfam PF00037 4Fe-4S binding domain 830 852 1.4E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 SUPERFAMILY SSF51971 447 690 4.94E-57 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 SUPERFAMILY SSF46548 339 457 6.28E-19 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Gene3D G3DSA:3.30.70.20 823 842 1.5E-25 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Gene3D G3DSA:3.30.70.20 276 301 1.5E-25 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 448 739 6.3E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 PANTHER PTHR11938:SF70 401 767 6.8E-248 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 PANTHER PTHR11938:SF70 284 311 6.8E-248 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 SUPERFAMILY SSF54862 256 310 4.45E-7 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 SUPERFAMILY SSF46548 780 853 1.52E-9 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Gene3D G3DSA:3.40.50.720 691 767 1.2E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 Gene3D G3DSA:3.40.50.720 451 538 1.2E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 PANTHER PTHR11938 401 767 6.8E-248 T 23-04-2016 CLI_RS02410 eeed2f532535eaffab704c3bf789977a 892 PANTHER PTHR11938 284 311 6.8E-248 T 23-04-2016 CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 305 318 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 SUPERFAMILY SSF52540 280 525 4.37E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 PANTHER PTHR32071:SF36 194 591 8.3E-205 T 23-04-2016 CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 Gene3D G3DSA:3.30.450.20 154 211 6.2E-5 T 23-04-2016 CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 495 504 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 PANTHER PTHR32071 194 591 8.3E-205 T 23-04-2016 CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 Gene3D G3DSA:1.10.8.60 455 529 2.2E-22 T 23-04-2016 CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 Gene3D G3DSA:3.40.50.300 277 454 1.3E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 Gene3D G3DSA:1.10.10.60 534 590 2.2E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 SMART SM00382 301 445 1.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 SUPERFAMILY SSF46689 495 589 1.11E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 Pfam PF00158 Sigma-54 interaction domain 281 448 1.3E-68 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS10165 d31accf8adfb613ec8799570442e6c29 591 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 368 383 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS00690 8e9a89f79fb5a25d39530febb1685f4d 255 Gene3D G3DSA:3.90.1200.10 30 249 1.8E-20 T 23-04-2016 CLI_RS02590 697907eaf18ca7a9b72551cf7c737709 196 SUPERFAMILY SSF53335 5 185 1.45E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS02590 697907eaf18ca7a9b72551cf7c737709 196 Pfam PF13847 Methyltransferase domain 35 155 1.8E-17 T 23-04-2016 IPR025714 Methyltransferase domain CLI_RS02590 697907eaf18ca7a9b72551cf7c737709 196 PANTHER PTHR10108 6 183 3.3E-19 T 23-04-2016 CLI_RS02590 697907eaf18ca7a9b72551cf7c737709 196 Gene3D G3DSA:3.40.50.150 5 176 1.4E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS00435 04a8af670d495cde0954992155807f60 246 Gene3D G3DSA:3.40.50.150 33 243 8.4E-67 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS00435 04a8af670d495cde0954992155807f60 246 Pfam PF05175 Methyltransferase small domain 34 173 4.5E-11 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 CLI_RS00435 04a8af670d495cde0954992155807f60 246 PANTHER PTHR18895:SF75 1 240 2.3E-93 T 23-04-2016 CLI_RS00435 04a8af670d495cde0954992155807f60 246 SUPERFAMILY SSF53335 8 214 1.15E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS00435 04a8af670d495cde0954992155807f60 246 PANTHER PTHR18895 1 240 2.3E-93 T 23-04-2016 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 Gene3D G3DSA:3.90.190.20 719 845 5.2E-25 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 858 0.0 T 23-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 SUPERFAMILY SSF56059 213 488 2.86E-31 T 23-04-2016 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 PANTHER PTHR23135:SF18 383 869 1.4E-287 T 23-04-2016 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 Pfam PF08443 RimK-like ATP-grasp domain 212 315 7.1E-8 T 23-04-2016 IPR013651 ATP-grasp fold, RimK-type CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 Pfam PF08443 RimK-like ATP-grasp domain 384 466 2.7E-4 T 23-04-2016 IPR013651 ATP-grasp fold, RimK-type CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 SUPERFAMILY SSF53244 717 845 1.03E-25 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 480 504 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 Pfam PF02875 Mur ligase family, glutamate ligase domain 717 791 1.7E-10 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 PANTHER PTHR23135 383 869 1.4E-287 T 23-04-2016 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 SUPERFAMILY SSF53623 441 728 7.2E-48 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 Gene3D G3DSA:3.30.470.20 207 330 6.5E-28 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 Gene3D G3DSA:3.30.470.20 392 475 6.5E-28 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 Gene3D G3DSA:3.40.1190.10 476 711 2.2E-42 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS00735 af88c0fbfc1f0a909b2018b00f26e20e 873 Pfam PF08245 Mur ligase middle domain 482 692 2.0E-33 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 Gene3D G3DSA:1.10.8.60 366 423 4.1E-4 T 23-04-2016 CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 SMART SM00382 199 378 5.1E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 PANTHER PTHR10046 7 639 9.0E-158 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 Gene3D G3DSA:3.30.230.10 464 639 2.4E-49 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 375 1.2E-15 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 PANTHER PTHR10046:SF53 7 639 9.0E-158 T 23-04-2016 IPR033141 LonB/LonC peptidase CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 SUPERFAMILY SSF52540 346 443 3.66E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 SUPERFAMILY SSF52540 164 315 3.66E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 442 637 5.4E-34 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 SUPERFAMILY SSF54211 470 638 4.55E-43 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 Gene3D G3DSA:3.40.50.300 174 365 1.3E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 548 556 - T 23-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 TIGRFAM TIGR02903 spore_lon_C: ATP-dependent protease, Lon family 28 639 0.0 T 23-04-2016 IPR014252 Sporulation protease LonC CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 598 616 1.3E-31 T 23-04-2016 CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 470 486 1.3E-31 T 23-04-2016 CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 207 226 1.3E-31 T 23-04-2016 CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 545 564 1.3E-31 T 23-04-2016 CLI_RS18715 17243e67c5d25ad69ebf9e92b69646e9 639 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 575 594 1.3E-31 T 23-04-2016 CLI_RS01470 52683d34eccca8ab76a8ccef3b307bc3 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CLI_RS01470 52683d34eccca8ab76a8ccef3b307bc3 212 PANTHER PTHR23416 57 212 7.5E-55 T 23-04-2016 CLI_RS01470 52683d34eccca8ab76a8ccef3b307bc3 212 PANTHER PTHR23416:SF69 57 212 7.5E-55 T 23-04-2016 CLI_RS01470 52683d34eccca8ab76a8ccef3b307bc3 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 152 2.4E-9 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS01470 52683d34eccca8ab76a8ccef3b307bc3 212 Gene3D G3DSA:2.160.10.10 20 208 2.7E-53 T 23-04-2016 CLI_RS01470 52683d34eccca8ab76a8ccef3b307bc3 212 SUPERFAMILY SSF51161 8 208 4.85E-49 T 23-04-2016 IPR011004 Trimeric LpxA-like CLI_RS05135 2a2115229b2ccdbaa63db31e757f7da4 345 Pfam PF10114 Sensory domain found in PocR 11 176 1.2E-48 T 23-04-2016 IPR018771 PocR domain UniPathway: UPA00148|UniPathway: UPA00621 CLI_RS05135 2a2115229b2ccdbaa63db31e757f7da4 345 PANTHER PTHR11019 209 340 3.8E-28 T 23-04-2016 CLI_RS05135 2a2115229b2ccdbaa63db31e757f7da4 345 SUPERFAMILY SSF46689 293 341 6.72E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS05135 2a2115229b2ccdbaa63db31e757f7da4 345 SUPERFAMILY SSF46689 241 289 7.77E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS05135 2a2115229b2ccdbaa63db31e757f7da4 345 SMART SM00342 256 339 2.5E-26 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS05135 2a2115229b2ccdbaa63db31e757f7da4 345 PANTHER PTHR11019:SF11 209 340 3.8E-28 T 23-04-2016 CLI_RS05135 2a2115229b2ccdbaa63db31e757f7da4 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 308 323 9.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS05135 2a2115229b2ccdbaa63db31e757f7da4 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 323 339 9.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS05135 2a2115229b2ccdbaa63db31e757f7da4 345 Pfam PF12833 Helix-turn-helix domain 262 340 6.4E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS05135 2a2115229b2ccdbaa63db31e757f7da4 345 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 293 335 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLI_RS05135 2a2115229b2ccdbaa63db31e757f7da4 345 Gene3D G3DSA:1.10.10.60 240 292 1.4E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS05135 2a2115229b2ccdbaa63db31e757f7da4 345 Gene3D G3DSA:1.10.10.60 293 340 5.0E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS16260 99164c829d13fda7caf36eb9501c30bc 324 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 253 1.3E-51 T 23-04-2016 IPR008275 CoA enzyme activase CLI_RS16260 99164c829d13fda7caf36eb9501c30bc 324 PANTHER PTHR32329:SF7 1 324 9.1E-151 T 23-04-2016 CLI_RS16260 99164c829d13fda7caf36eb9501c30bc 324 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 254 1.6E-40 T 23-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS16260 99164c829d13fda7caf36eb9501c30bc 324 Gene3D G3DSA:3.30.420.40 1 62 2.2E-4 T 23-04-2016 CLI_RS16260 99164c829d13fda7caf36eb9501c30bc 324 PANTHER PTHR32329 1 324 9.1E-151 T 23-04-2016 CLI_RS16260 99164c829d13fda7caf36eb9501c30bc 324 Gene3D G3DSA:3.30.420.40 97 236 8.0E-50 T 23-04-2016 CLI_RS16260 99164c829d13fda7caf36eb9501c30bc 324 SUPERFAMILY SSF53067 2 254 4.95E-37 T 23-04-2016 CLI_RS05655 7095dc3b8ed1673e36f13c152334fc86 587 Gene3D G3DSA:3.40.50.300 2 158 1.4E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05655 7095dc3b8ed1673e36f13c152334fc86 587 SUPERFAMILY SSF52540 1 157 1.18E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05655 7095dc3b8ed1673e36f13c152334fc86 587 PANTHER PTHR11649 190 586 6.7E-254 T 23-04-2016 CLI_RS05655 7095dc3b8ed1673e36f13c152334fc86 587 PANTHER PTHR11649 1 141 6.7E-254 T 23-04-2016 CLI_RS05655 7095dc3b8ed1673e36f13c152334fc86 587 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 195 555 2.0E-123 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLI_RS05655 7095dc3b8ed1673e36f13c152334fc86 587 Pfam PF07664 Ferrous iron transport protein B C terminus 382 434 2.5E-21 T 23-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CLI_RS05655 7095dc3b8ed1673e36f13c152334fc86 587 Pfam PF07670 Nucleoside recognition 278 369 6.5E-15 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS05655 7095dc3b8ed1673e36f13c152334fc86 587 Pfam PF07670 Nucleoside recognition 439 558 6.8E-34 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS05655 7095dc3b8ed1673e36f13c152334fc86 587 PANTHER PTHR11649:SF37 190 586 6.7E-254 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLI_RS05655 7095dc3b8ed1673e36f13c152334fc86 587 PANTHER PTHR11649:SF37 1 141 6.7E-254 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLI_RS05655 7095dc3b8ed1673e36f13c152334fc86 587 Pfam PF02421 Ferrous iron transport protein B 3 153 1.1E-60 T 23-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLI_RS03300 49bc6c6674bc5a83f545595175f71cb4 432 PANTHER PTHR24423 5 11 1.1E-18 T 23-04-2016 CLI_RS03300 49bc6c6674bc5a83f545595175f71cb4 432 PANTHER PTHR24423 243 432 1.1E-18 T 23-04-2016 CLI_RS03300 49bc6c6674bc5a83f545595175f71cb4 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.58E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS03300 49bc6c6674bc5a83f545595175f71cb4 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.58E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS03300 49bc6c6674bc5a83f545595175f71cb4 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.58E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS03300 49bc6c6674bc5a83f545595175f71cb4 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 1.58E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS03300 49bc6c6674bc5a83f545595175f71cb4 432 PANTHER PTHR24423:SF543 5 11 1.1E-18 T 23-04-2016 CLI_RS03300 49bc6c6674bc5a83f545595175f71cb4 432 PANTHER PTHR24423:SF543 243 432 1.1E-18 T 23-04-2016 CLI_RS03300 49bc6c6674bc5a83f545595175f71cb4 432 SMART SM00387 307 426 1.1E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03300 49bc6c6674bc5a83f545595175f71cb4 432 SUPERFAMILY SSF55874 281 423 2.49E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03300 49bc6c6674bc5a83f545595175f71cb4 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 312 424 1.2E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03300 49bc6c6674bc5a83f545595175f71cb4 432 Gene3D G3DSA:3.30.565.10 276 423 3.7E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 SUPERFAMILY SSF56784 555 804 7.22E-67 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 SUPERFAMILY SSF56784 497 516 7.22E-67 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 500 506 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 SUPERFAMILY SSF55008 1 70 9.16E-20 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 212 807 9.4E-191 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 Gene3D G3DSA:3.40.50.1000 469 511 3.8E-61 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 Gene3D G3DSA:3.40.50.1000 625 765 3.8E-61 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00943 Copper-transporting ATPase signature 117 137 1.1E-21 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00943 Copper-transporting ATPase signature 674 691 1.1E-21 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00943 Copper-transporting ATPase signature 268 287 1.1E-21 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00943 Copper-transporting ATPase signature 731 745 1.1E-21 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00943 Copper-transporting ATPase signature 421 435 1.1E-21 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00943 Copper-transporting ATPase signature 481 496 1.1E-21 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00943 Copper-transporting ATPase signature 288 306 1.1E-21 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00943 Copper-transporting ATPase signature 215 234 1.1E-21 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 Gene3D G3DSA:3.40.1110.10 512 624 5.7E-28 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 75 137 5.8E-14 T 23-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 3 67 3.4E-13 T 23-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 Gene3D G3DSA:3.30.70.100 73 137 2.7E-22 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 Gene3D G3DSA:3.30.70.100 1 68 1.0E-22 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 SUPERFAMILY SSF55008 72 138 3.8E-19 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 Pfam PF00702 haloacid dehalogenase-like hydrolase 496 711 9.2E-48 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 SUPERFAMILY SSF81653 301 398 4.84E-30 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00942 Copper-transporting ATPase 1 signature 3 28 1.8E-8 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00942 Copper-transporting ATPase 1 signature 96 117 1.8E-8 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00942 Copper-transporting ATPase 1 signature 213 238 1.8E-8 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 SUPERFAMILY SSF81665 242 302 1.31E-15 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 SUPERFAMILY SSF81665 746 795 1.31E-15 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 SUPERFAMILY SSF81665 399 492 1.31E-15 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 Pfam PF00122 E1-E2 ATPase 270 489 2.8E-72 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PANTHER PTHR24093 1 808 3.4E-303 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 Gene3D G3DSA:2.70.150.10 254 399 6.0E-36 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 271 777 6.2E-108 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 654 1.6E-30 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 512 1.6E-30 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 716 1.6E-30 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 348 362 1.6E-30 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 720 732 1.6E-30 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 633 1.6E-30 T 23-04-2016 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 Pfam PF00403 Heavy-metal-associated domain 76 136 4.4E-13 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 Pfam PF00403 Heavy-metal-associated domain 6 66 1.1E-13 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS06755 b61511b92454cc53a1f6de75ddf0fff7 811 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 230 806 2.3E-204 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CLI_RS05440 b7889d01f34ddd65f556944ce4b40cb9 396 SUPERFAMILY SSF53092 8 117 1.19E-20 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLI_RS05440 b7889d01f34ddd65f556944ce4b40cb9 396 PANTHER PTHR10804:SF110 122 370 3.1E-37 T 23-04-2016 CLI_RS05440 b7889d01f34ddd65f556944ce4b40cb9 396 PANTHER PTHR10804:SF110 11 20 3.1E-37 T 23-04-2016 CLI_RS05440 b7889d01f34ddd65f556944ce4b40cb9 396 SUPERFAMILY SSF55920 141 370 4.58E-52 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS05440 b7889d01f34ddd65f556944ce4b40cb9 396 Pfam PF00557 Metallopeptidase family M24 148 357 3.8E-34 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS05440 b7889d01f34ddd65f556944ce4b40cb9 396 PANTHER PTHR10804 122 370 3.1E-37 T 23-04-2016 CLI_RS05440 b7889d01f34ddd65f556944ce4b40cb9 396 PANTHER PTHR10804 11 20 3.1E-37 T 23-04-2016 CLI_RS05440 b7889d01f34ddd65f556944ce4b40cb9 396 Gene3D G3DSA:3.90.230.10 141 377 8.1E-56 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS05440 b7889d01f34ddd65f556944ce4b40cb9 396 Gene3D G3DSA:3.40.350.10 8 115 1.8E-20 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLI_RS05440 b7889d01f34ddd65f556944ce4b40cb9 396 Pfam PF01321 Creatinase/Prolidase N-terminal domain 12 122 2.1E-15 T 23-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 CLI_RS05620 0a086c9e873979d013bd9614e4781319 122 SUPERFAMILY SSF160148 47 117 1.31E-24 T 23-04-2016 IPR012460 Protein of unknown function DUF1667 CLI_RS05620 0a086c9e873979d013bd9614e4781319 122 Gene3D G3DSA:3.10.530.10 47 116 1.2E-29 T 23-04-2016 IPR012460 Protein of unknown function DUF1667 CLI_RS05620 0a086c9e873979d013bd9614e4781319 122 Pfam PF07892 Protein of unknown function (DUF1667) 35 116 4.2E-33 T 23-04-2016 IPR012460 Protein of unknown function DUF1667 CLI_RS05620 0a086c9e873979d013bd9614e4781319 122 Gene3D G3DSA:2.20.25.90 7 33 5.3E-4 T 23-04-2016 CLI_RS05620 0a086c9e873979d013bd9614e4781319 122 PANTHER PTHR39450 3 122 1.4E-55 T 23-04-2016 CLI_RS05620 0a086c9e873979d013bd9614e4781319 122 SUPERFAMILY SSF53706 6 54 4.24E-6 T 23-04-2016 CLI_RS13405 8308ca40316f3c44ced02dcc18896973 476 PANTHER PTHR30250:SF9 7 472 1.7E-173 T 23-04-2016 CLI_RS13405 8308ca40316f3c44ced02dcc18896973 476 Pfam PF13440 Polysaccharide biosynthesis protein 39 269 2.6E-9 T 23-04-2016 CLI_RS13405 8308ca40316f3c44ced02dcc18896973 476 PANTHER PTHR30250 7 472 1.7E-173 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SUPERFAMILY SSF52058 353 548 1.93E-27 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Gene3D G3DSA:3.80.10.10 592 665 9.2E-19 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 637 658 770.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 703 731 68.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 659 680 38.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 901 922 290.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 225 246 160.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 203 224 110.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 923 944 0.28 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 354 375 220.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 681 702 51.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 247 264 95.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 442 463 320.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 268 289 100.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 615 636 59.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00365 181 202 12.0 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Pfam PF12799 Leucine Rich repeats (2 copies) 377 418 8.5E-7 T 23-04-2016 IPR025875 Leucine rich repeat 4 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Pfam PF12799 Leucine Rich repeats (2 copies) 925 966 8.2E-7 T 23-04-2016 IPR025875 Leucine rich repeat 4 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Pfam PF12799 Leucine Rich repeats (2 copies) 269 301 1.1E-6 T 23-04-2016 IPR025875 Leucine rich repeat 4 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 PRINTS PR00019 Leucine-rich repeat signature 618 631 8.5E-5 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 PRINTS PR00019 Leucine-rich repeat signature 659 672 8.5E-5 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Gene3D G3DSA:3.80.10.10 160 307 1.9E-32 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SUPERFAMILY SSF63825 1149 1349 7.32E-11 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 PANTHER PTHR24365:SF383 84 282 1.2E-304 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 PANTHER PTHR24365:SF383 822 1299 1.2E-304 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 PANTHER PTHR24365:SF383 606 764 1.2E-304 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 PANTHER PTHR24365:SF383 369 476 1.2E-304 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 PANTHER PTHR24365 84 282 1.2E-304 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 PANTHER PTHR24365 822 1299 1.2E-304 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 PANTHER PTHR24365 606 764 1.2E-304 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 PANTHER PTHR24365 369 476 1.2E-304 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Pfam PF16472 Domain of unknown function (DUF5050) 1092 1353 1.4E-48 T 23-04-2016 IPR032485 Domain of unknown function DUF5050 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00369 181 202 42.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00369 615 640 64.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00369 398 419 300.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00369 659 680 9.1 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00369 703 726 230.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00369 923 948 18.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00369 681 702 20.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00369 901 922 200.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SMART SM00369 203 228 55.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Gene3D G3DSA:3.80.10.10 345 550 7.4E-31 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Gene3D G3DSA:3.80.10.10 790 977 4.0E-27 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Gene3D G3DSA:2.120.10.60 1099 1273 3.0E-28 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SUPERFAMILY SSF52058 157 316 7.48E-29 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Gene3D G3DSA:2.120.10.30 1274 1334 2.7E-6 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Pfam PF13855 Leucine rich repeat 639 694 2.0E-8 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SUPERFAMILY SSF52047 482 745 1.88E-32 T 23-04-2016 CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 SUPERFAMILY SSF52058 818 980 1.26E-24 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Gene3D G3DSA:3.80.10.10 666 759 5.3E-19 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS08690 4f6ea373efb85678d767903081470a58 1359 Pfam PF07532 Bacterial Ig-like domain (group 4) 1017 1072 5.0E-16 T 23-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 CLI_RS18470 9f0c91e23d0bbbd4a5c4693592bfb824 348 PANTHER PTHR22976 1 341 9.0E-122 T 23-04-2016 CLI_RS18470 9f0c91e23d0bbbd4a5c4693592bfb824 348 SUPERFAMILY SSF102114 14 297 1.33E-58 T 23-04-2016 CLI_RS18470 9f0c91e23d0bbbd4a5c4693592bfb824 348 Pfam PF04055 Radical SAM superfamily 56 214 3.1E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS18470 9f0c91e23d0bbbd4a5c4693592bfb824 348 PIRSF PIRSF004762 1 329 7.6E-72 T 23-04-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 CLI_RS18470 9f0c91e23d0bbbd4a5c4693592bfb824 348 Gene3D G3DSA:3.20.20.70 13 334 2.0E-87 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS18470 9f0c91e23d0bbbd4a5c4693592bfb824 348 TIGRFAM TIGR03956 rSAM_HydE: [FeFe] hydrogenase H-cluster radical SAM maturase HydE 4 341 4.4E-169 T 23-04-2016 IPR024021 [FeFe]-hydrogenase maturation HydE, radical SAM CLI_RS18470 9f0c91e23d0bbbd4a5c4693592bfb824 348 SMART SM00729 52 259 3.2E-29 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS18470 9f0c91e23d0bbbd4a5c4693592bfb824 348 SMART SM00876 227 320 0.0043 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CLI_RS18470 9f0c91e23d0bbbd4a5c4693592bfb824 348 PANTHER PTHR22976:SF28 1 341 9.0E-122 T 23-04-2016 CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 6.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.0E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 257 4.5E-57 T 23-04-2016 CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 Gene3D G3DSA:3.40.50.720 3 258 7.6E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PANTHER PTHR24322:SF330 155 186 3.5E-53 T 23-04-2016 CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PANTHER PTHR24322 155 186 3.5E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 SUPERFAMILY SSF51735 4 259 6.54E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PANTHER PTHR24322 10 139 3.5E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS17500 bdd38556f38354f67aba29ad1ed0fe18 261 PANTHER PTHR24322:SF330 10 139 3.5E-53 T 23-04-2016 CLI_RS14280 df668c83415db66d5ea8101ea59b8489 297 Pfam PF00753 Metallo-beta-lactamase superfamily 18 204 2.5E-14 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS14280 df668c83415db66d5ea8101ea59b8489 297 PANTHER PTHR11935 13 267 3.3E-85 T 23-04-2016 CLI_RS14280 df668c83415db66d5ea8101ea59b8489 297 PANTHER PTHR11935:SF7 13 267 3.3E-85 T 23-04-2016 CLI_RS14280 df668c83415db66d5ea8101ea59b8489 297 SMART SM00849 16 204 3.4E-23 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS14280 df668c83415db66d5ea8101ea59b8489 297 Gene3D G3DSA:3.60.15.10 1 248 8.8E-35 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS14280 df668c83415db66d5ea8101ea59b8489 297 SUPERFAMILY SSF56281 3 250 7.21E-39 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS04905 de2f11de610b669d1cbda3bc1a59b1cf 246 SMART SM00382 39 213 1.3E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS04905 de2f11de610b669d1cbda3bc1a59b1cf 246 Gene3D G3DSA:3.40.50.300 30 74 9.9E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04905 de2f11de610b669d1cbda3bc1a59b1cf 246 SUPERFAMILY SSF52540 30 213 3.69E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04905 de2f11de610b669d1cbda3bc1a59b1cf 246 Gene3D G3DSA:3.40.50.300 133 214 3.2E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04905 de2f11de610b669d1cbda3bc1a59b1cf 246 Pfam PF13476 AAA domain 31 84 9.3E-12 T 23-04-2016 CLI_RS04905 de2f11de610b669d1cbda3bc1a59b1cf 246 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 155 201 2.7E-8 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS01515 69a58ac274b7b5d852a109b0ee59c6b0 279 SMART SM01092 179 274 7.7E-7 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLI_RS01515 69a58ac274b7b5d852a109b0ee59c6b0 279 PANTHER PTHR11908:SF93 1 275 1.4E-92 T 23-04-2016 CLI_RS01515 69a58ac274b7b5d852a109b0ee59c6b0 279 Gene3D G3DSA:3.30.465.10 61 166 5.5E-14 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLI_RS01515 69a58ac274b7b5d852a109b0ee59c6b0 279 PANTHER PTHR11908 1 275 1.4E-92 T 23-04-2016 CLI_RS01515 69a58ac274b7b5d852a109b0ee59c6b0 279 SUPERFAMILY SSF55447 179 274 1.31E-11 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLI_RS01515 69a58ac274b7b5d852a109b0ee59c6b0 279 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 166 4.5E-26 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CLI_RS01515 69a58ac274b7b5d852a109b0ee59c6b0 279 Gene3D G3DSA:3.30.43.10 1 57 1.6E-11 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CLI_RS01515 69a58ac274b7b5d852a109b0ee59c6b0 279 SUPERFAMILY SSF56176 1 166 4.16E-33 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLI_RS01515 69a58ac274b7b5d852a109b0ee59c6b0 279 Gene3D G3DSA:3.30.390.50 182 272 3.2E-6 T 23-04-2016 CLI_RS14555 0a2704884f1db25220accd17fc58bca1 147 Pfam PF07486 Cell Wall Hydrolase 19 138 1.8E-19 T 23-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 CLI_RS00075 c389551239020ca6047fdb63ef027b23 173 SUPERFAMILY SSF46785 1 61 1.07E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS00075 c389551239020ca6047fdb63ef027b23 173 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 76 169 9.0E-29 T 23-04-2016 IPR004173 3H domain GO:0036094 CLI_RS00075 c389551239020ca6047fdb63ef027b23 173 PANTHER PTHR40068 1 172 4.2E-80 T 23-04-2016 CLI_RS00075 c389551239020ca6047fdb63ef027b23 173 SUPERFAMILY SSF75500 68 170 8.11E-34 T 23-04-2016 IPR004173 3H domain GO:0036094 CLI_RS00075 c389551239020ca6047fdb63ef027b23 173 Pfam PF02829 3H domain 72 168 1.8E-35 T 23-04-2016 IPR004173 3H domain GO:0036094 CLI_RS00075 c389551239020ca6047fdb63ef027b23 173 Gene3D G3DSA:3.30.1340.20 67 171 7.1E-40 T 23-04-2016 IPR004173 3H domain GO:0036094 CLI_RS00075 c389551239020ca6047fdb63ef027b23 173 Gene3D G3DSA:1.10.10.10 1 60 4.9E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS00075 c389551239020ca6047fdb63ef027b23 173 Pfam PF08279 HTH domain 6 58 6.6E-14 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 CLI_RS00075 c389551239020ca6047fdb63ef027b23 173 PIRSF PIRSF037847 1 171 8.4E-71 T 23-04-2016 IPR026043 Transcription repressor NadR CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 157 1098 0.0 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 SMART SM00490 847 931 5.4E-20 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 44 1121 29.283 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 SMART SM00982 1024 1123 9.4E-34 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 Gene3D G3DSA:3.40.50.300 820 977 4.3E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 SUPERFAMILY SSF52540 803 1010 3.13E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 Pfam PF03461 TRCF domain 1025 1114 2.4E-26 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 SUPERFAMILY SSF52540 544 804 2.1E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 Gene3D G3DSA:3.40.50.300 610 807 2.7E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 SUPERFAMILY SSF52540 16 364 1.05E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 SMART SM00487 621 811 1.6E-39 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 SUPERFAMILY SSF141259 494 569 1.96E-24 T 23-04-2016 IPR003711 CarD-like/TRCF domain CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 SUPERFAMILY SSF52540 380 488 7.21E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 Pfam PF00271 Helicase conserved C-terminal domain 827 930 2.0E-20 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 SUPERFAMILY SSF143517 1011 1165 5.36E-34 T 23-04-2016 CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 SMART SM01058 500 597 5.3E-49 T 23-04-2016 IPR003711 CarD-like/TRCF domain CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 Pfam PF00270 DEAD/DEAH box helicase 626 785 3.1E-19 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 PANTHER PTHR14025:SF21 409 1166 0.0 T 23-04-2016 CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 PANTHER PTHR14025 409 1166 0.0 T 23-04-2016 CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 Gene3D G3DSA:3.30.2060.10 141 217 6.2E-15 T 23-04-2016 CLI_RS18235 85e5d033a95bfcd284f23342ad9e0886 1168 Pfam PF02559 CarD-like/TRCF domain 501 596 2.9E-31 T 23-04-2016 IPR003711 CarD-like/TRCF domain CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 Gene3D G3DSA:1.10.287.610 4 66 1.8E-19 T 23-04-2016 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 SUPERFAMILY SSF50249 318 395 3.77E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 Hamap MF_01588 DNA ligase [ligA]. 1 663 44.548 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 321 397 2.7E-29 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 SMART SM00292 589 664 7.3E-11 T 23-04-2016 IPR001357 BRCT domain CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 PANTHER PTHR23389:SF9 1 522 1.4E-155 T 23-04-2016 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 Gene3D G3DSA:1.10.150.20 501 581 4.7E-25 T 23-04-2016 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 SUPERFAMILY SSF47781 404 581 5.93E-57 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 Pfam PF14520 Helix-hairpin-helix domain 443 498 0.0058 T 23-04-2016 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 659 1.1E-211 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 318 2.2E-90 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 SMART SM00532 3 445 4.7E-166 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 Gene3D G3DSA:3.30.470.30 126 252 4.7E-35 T 23-04-2016 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 Pfam PF12826 Helix-hairpin-helix motif 508 569 1.3E-22 T 23-04-2016 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 SUPERFAMILY SSF56091 2 315 2.4E-94 T 23-04-2016 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 SMART SM00278 443 462 0.51 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 SMART SM00278 509 528 160.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 SMART SM00278 541 560 3.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 SMART SM00278 477 496 510.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 PIRSF PIRSF001604 1 664 3.1E-231 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 Gene3D G3DSA:3.40.50.10190 589 661 5.4E-25 T 23-04-2016 IPR001357 BRCT domain CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 Gene3D G3DSA:2.40.50.140 321 391 1.8E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 589 660 3.7E-16 T 23-04-2016 IPR001357 BRCT domain CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 23-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 Gene3D G3DSA:1.10.150.20 432 500 3.0E-24 T 23-04-2016 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 PANTHER PTHR23389 1 522 1.4E-155 T 23-04-2016 CLI_RS16740 a84639c9128cea40314fbab2f2efd6f7 664 SUPERFAMILY SSF52113 588 662 3.93E-20 T 23-04-2016 IPR001357 BRCT domain CLI_RS12880 65f1dfc658c754b19a1fdeb708cd67d7 194 SUPERFAMILY SSF75169 95 193 1.22E-14 T 23-04-2016 IPR027396 DsrEFH-like CLI_RS12880 65f1dfc658c754b19a1fdeb708cd67d7 194 PANTHER PTHR33279 1 194 4.4E-110 T 23-04-2016 CLI_RS12880 65f1dfc658c754b19a1fdeb708cd67d7 194 Pfam PF02635 DsrE/DsrF-like family 132 192 1.9E-5 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein CLI_RS12880 65f1dfc658c754b19a1fdeb708cd67d7 194 Pfam PF01206 Sulfurtransferase TusA 4 70 1.0E-15 T 23-04-2016 IPR001455 TusA-like domain CLI_RS12880 65f1dfc658c754b19a1fdeb708cd67d7 194 Gene3D G3DSA:3.40.1260.10 122 180 4.5E-19 T 23-04-2016 IPR027396 DsrEFH-like CLI_RS12880 65f1dfc658c754b19a1fdeb708cd67d7 194 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 5 29 - T 23-04-2016 IPR001455 TusA-like domain CLI_RS12880 65f1dfc658c754b19a1fdeb708cd67d7 194 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 5 193 9.8E-74 T 23-04-2016 IPR019870 Selenium metabolism protein YedF CLI_RS12880 65f1dfc658c754b19a1fdeb708cd67d7 194 Gene3D G3DSA:3.30.110.40 1 70 6.8E-15 T 23-04-2016 IPR001455 TusA-like domain CLI_RS12880 65f1dfc658c754b19a1fdeb708cd67d7 194 PANTHER PTHR33279:SF3 1 194 4.4E-110 T 23-04-2016 CLI_RS12880 65f1dfc658c754b19a1fdeb708cd67d7 194 SUPERFAMILY SSF64307 2 70 5.62E-13 T 23-04-2016 IPR001455 TusA-like domain CLI_RS01360 376b90fa456f87a18ea4490fea528102 258 PANTHER PTHR10108 14 142 8.4E-17 T 23-04-2016 CLI_RS01360 376b90fa456f87a18ea4490fea528102 258 SUPERFAMILY SSF53335 1 210 5.08E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS01360 376b90fa456f87a18ea4490fea528102 258 Gene3D G3DSA:3.40.50.150 7 214 3.7E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS01360 376b90fa456f87a18ea4490fea528102 258 Pfam PF08241 Methyltransferase domain 47 141 4.1E-14 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 Pfam PF03144 Elongation factor Tu domain 2 312 378 1.0E-8 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 Gene3D G3DSA:3.40.50.300 5 280 6.2E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 SUPERFAMILY SSF52540 8 273 6.79E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 SUPERFAMILY SSF54980 392 465 9.35E-14 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 Pfam PF00009 Elongation factor Tu GTP binding domain 11 274 8.4E-52 T 23-04-2016 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 Gene3D G3DSA:2.40.30.10 292 386 6.3E-26 T 23-04-2016 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 PANTHER PTHR23115 249 487 1.9E-235 T 23-04-2016 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 PANTHER PTHR23115 1 182 1.9E-235 T 23-04-2016 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 SUPERFAMILY SSF50447 259 386 1.48E-27 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 2 526 1.3E-210 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 146 4.1E-24 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 386 514 7.2E-49 T 23-04-2016 IPR032090 Peptide chain release factor 3, C-terminal CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 Gene3D G3DSA:3.30.70.870 394 465 4.1E-10 T 23-04-2016 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 PANTHER PTHR23115:SF69 249 487 1.9E-235 T 23-04-2016 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 PANTHER PTHR23115:SF69 1 182 1.9E-235 T 23-04-2016 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 527 50.067 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.4E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.4E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.4E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 PRINTS PR00315 GTP-binding elongation factor signature 63 71 1.4E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17035 8c6468277c13eaec7caafed13cc2d983 529 PRINTS PR00315 GTP-binding elongation factor signature 13 26 1.4E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS09770 380930d4735fada6bbf2321cc1a6f15d 620 Gene3D G3DSA:1.20.1560.10 35 360 1.7E-91 T 23-04-2016 CLI_RS09770 380930d4735fada6bbf2321cc1a6f15d 620 ProSitePatterns PS00211 ABC transporters family signature. 515 529 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS09770 380930d4735fada6bbf2321cc1a6f15d 620 Pfam PF00664 ABC transporter transmembrane region 49 331 4.4E-60 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS09770 380930d4735fada6bbf2321cc1a6f15d 620 SUPERFAMILY SSF52540 367 614 2.88E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09770 380930d4735fada6bbf2321cc1a6f15d 620 PANTHER PTHR24221:SF271 1 620 0.0 T 23-04-2016 CLI_RS09770 380930d4735fada6bbf2321cc1a6f15d 620 SMART SM00382 403 589 5.7E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS09770 380930d4735fada6bbf2321cc1a6f15d 620 PANTHER PTHR24221 1 620 0.0 T 23-04-2016 CLI_RS09770 380930d4735fada6bbf2321cc1a6f15d 620 Pfam PF00005 ABC transporter 395 543 6.3E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS09770 380930d4735fada6bbf2321cc1a6f15d 620 Gene3D G3DSA:3.40.50.300 378 608 1.4E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09770 380930d4735fada6bbf2321cc1a6f15d 620 SUPERFAMILY SSF90123 32 361 8.24E-89 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS13645 c7a0281216016449232359fb04bd9fe6 131 SUPERFAMILY SSF50341 1 131 6.15E-31 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLI_RS13645 c7a0281216016449232359fb04bd9fe6 131 PANTHER PTHR22617 1 131 9.2E-35 T 23-04-2016 CLI_RS13645 c7a0281216016449232359fb04bd9fe6 131 Gene3D G3DSA:2.40.50.180 38 75 2.2E-7 T 23-04-2016 CLI_RS13645 c7a0281216016449232359fb04bd9fe6 131 Gene3D G3DSA:2.30.30.40 76 123 2.1E-7 T 23-04-2016 CLI_RS13645 c7a0281216016449232359fb04bd9fe6 131 SMART SM00260 1 131 7.5E-18 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLI_RS13645 c7a0281216016449232359fb04bd9fe6 131 Pfam PF01584 CheW-like domain 2 131 2.7E-30 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLI_RS17420 94f13f9c4f2decdaf6e209e060dca690 117 PIRSF PIRSF033490 4 116 3.3E-37 T 23-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 CLI_RS17420 94f13f9c4f2decdaf6e209e060dca690 117 SUPERFAMILY SSF50118 5 116 9.97E-41 T 23-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLI_RS17420 94f13f9c4f2decdaf6e209e060dca690 117 Gene3D G3DSA:2.30.30.110 5 116 3.0E-48 T 23-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLI_RS17420 94f13f9c4f2decdaf6e209e060dca690 117 PANTHER PTHR33988 1 117 8.6E-56 T 23-04-2016 CLI_RS17420 94f13f9c4f2decdaf6e209e060dca690 117 PANTHER PTHR33988:SF2 1 117 8.6E-56 T 23-04-2016 CLI_RS17420 94f13f9c4f2decdaf6e209e060dca690 117 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 7 113 1.1E-34 T 23-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.3E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.3E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.3E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PANTHER PTHR24322 11 140 1.2E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PANTHER PTHR24322 156 188 1.2E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 244 1.7E-66 T 23-04-2016 CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PANTHER PTHR24322:SF328 11 140 1.2E-56 T 23-04-2016 CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PANTHER PTHR24322:SF328 156 188 1.2E-56 T 23-04-2016 CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 Gene3D G3DSA:3.40.50.720 3 246 2.4E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 6.6E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.6E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.6E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.6E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.6E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.6E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS02735 a724b46e7849e3af104997dea00b2135 247 SUPERFAMILY SSF51735 6 246 2.73E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 PANTHER PTHR11102 125 219 1.1E-92 T 23-04-2016 CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 PANTHER PTHR11102 402 565 1.1E-92 T 23-04-2016 CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 Gene3D G3DSA:1.25.40.10 421 564 8.7E-49 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 Pfam PF08238 Sel1 repeat 533 561 1.1E-4 T 23-04-2016 IPR006597 Sel1-like repeat CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 Pfam PF08238 Sel1 repeat 459 493 2.1E-8 T 23-04-2016 IPR006597 Sel1-like repeat CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 Pfam PF08238 Sel1 repeat 496 529 4.6E-7 T 23-04-2016 IPR006597 Sel1-like repeat CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 Pfam PF08238 Sel1 repeat 439 457 0.005 T 23-04-2016 IPR006597 Sel1-like repeat CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 PANTHER PTHR11102:SF11 402 565 1.1E-92 T 23-04-2016 CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 PANTHER PTHR11102:SF11 125 219 1.1E-92 T 23-04-2016 CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 SMART SM00671 530 565 4.3E-5 T 23-04-2016 IPR006597 Sel1-like repeat CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 SMART SM00671 458 493 5.8E-11 T 23-04-2016 IPR006597 Sel1-like repeat CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 SMART SM00671 426 457 1.5E-5 T 23-04-2016 IPR006597 Sel1-like repeat CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 SMART SM00671 494 529 2.5E-9 T 23-04-2016 IPR006597 Sel1-like repeat CLI_RS04795 af8692ce0edfd6732f2eff77e3598304 568 SUPERFAMILY SSF81901 428 565 1.48E-39 T 23-04-2016 CLI_RS11895 527ad6533ad864e7d0baeb3a15671c5a 381 Pfam PF10926 Protein of unknown function (DUF2800) 4 371 1.7E-150 T 23-04-2016 IPR021229 Protein of unknown function DUF2800 CLI_RS18005 fa45926cb138ab420aef5f985f058433 347 ProSitePatterns PS00112 Phosphagen kinase active site signature. 156 162 - T 23-04-2016 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: REACT_13 CLI_RS18005 fa45926cb138ab420aef5f985f058433 347 SUPERFAMILY SSF55931 9 257 3.64E-81 T 23-04-2016 CLI_RS18005 fa45926cb138ab420aef5f985f058433 347 PANTHER PTHR11547 5 244 9.1E-113 T 23-04-2016 IPR000749 ATP:guanido phosphotransferase GO:0016772 Reactome: REACT_13 CLI_RS18005 fa45926cb138ab420aef5f985f058433 347 PANTHER PTHR11547 296 338 9.1E-113 T 23-04-2016 IPR000749 ATP:guanido phosphotransferase GO:0016772 Reactome: REACT_13 CLI_RS18005 fa45926cb138ab420aef5f985f058433 347 Hamap MF_00602 Protein-arginine kinase [mcsB]. 3 339 34.516 T 23-04-2016 IPR023660 Arginine kinase GO:0016775 CLI_RS18005 fa45926cb138ab420aef5f985f058433 347 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 12 241 4.5E-86 T 23-04-2016 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: REACT_13 CLI_RS18005 fa45926cb138ab420aef5f985f058433 347 PANTHER PTHR11547:SF23 5 244 9.1E-113 T 23-04-2016 CLI_RS18005 fa45926cb138ab420aef5f985f058433 347 PANTHER PTHR11547:SF23 296 338 9.1E-113 T 23-04-2016 CLI_RS18005 fa45926cb138ab420aef5f985f058433 347 Gene3D G3DSA:3.30.590.10 11 242 8.7E-77 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 CLI_RS15615 4ac402a4d2adfe5adda188b3cb0e86dd 220 SUPERFAMILY SSF51735 4 135 1.27E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15615 4ac402a4d2adfe5adda188b3cb0e86dd 220 Gene3D G3DSA:3.30.70.1450 147 215 3.3E-17 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS15615 4ac402a4d2adfe5adda188b3cb0e86dd 220 Pfam PF02080 TrkA-C domain 153 214 1.0E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS15615 4ac402a4d2adfe5adda188b3cb0e86dd 220 SUPERFAMILY SSF116726 132 214 2.62E-20 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS15615 4ac402a4d2adfe5adda188b3cb0e86dd 220 Gene3D G3DSA:3.40.50.720 3 140 2.7E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15615 4ac402a4d2adfe5adda188b3cb0e86dd 220 Pfam PF02254 TrkA-N domain 6 121 4.1E-29 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CLI_RS15615 4ac402a4d2adfe5adda188b3cb0e86dd 220 PANTHER PTHR16254 3 160 4.3E-56 T 23-04-2016 CLI_RS06140 79bd9181278fd656cc163522151df009 266 PANTHER PTHR11807 4 266 8.9E-81 T 23-04-2016 CLI_RS06140 79bd9181278fd656cc163522151df009 266 Pfam PF02540 NAD synthase 12 77 8.6E-6 T 23-04-2016 IPR022310 NAD/GMP synthase CLI_RS06140 79bd9181278fd656cc163522151df009 266 PIRSF PIRSF006661 1 266 6.1E-105 T 23-04-2016 IPR005232 Conserved hypothetical protein CHP00268 CLI_RS06140 79bd9181278fd656cc163522151df009 266 SUPERFAMILY SSF52402 17 217 3.09E-36 T 23-04-2016 CLI_RS06140 79bd9181278fd656cc163522151df009 266 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 4 257 3.5E-84 T 23-04-2016 IPR005232 Conserved hypothetical protein CHP00268 CLI_RS06140 79bd9181278fd656cc163522151df009 266 PANTHER PTHR11807:SF17 4 266 8.9E-81 T 23-04-2016 CLI_RS06140 79bd9181278fd656cc163522151df009 266 Gene3D G3DSA:3.40.50.620 16 167 1.2E-27 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS01090 13f197208ddf671a41567acde2959f76 813 Pfam PF09334 tRNA synthetases class I (M) 40 180 1.6E-17 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 813 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 410 605 2.5E-20 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 397 2.8E-66 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 SUPERFAMILY SSF47323 638 812 9.16E-32 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 Gene3D G3DSA:3.40.50.620 6 220 1.7E-143 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS01090 13f197208ddf671a41567acde2959f76 813 Gene3D G3DSA:3.40.50.620 415 595 1.7E-143 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS01090 13f197208ddf671a41567acde2959f76 813 Gene3D G3DSA:1.10.730.10 596 748 6.2E-34 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 812 21.714 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 SUPERFAMILY SSF52374 7 224 3.83E-139 T 23-04-2016 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 SUPERFAMILY SSF52374 409 618 3.83E-139 T 23-04-2016 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 SUPERFAMILY SSF50677 224 408 1.15E-54 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 Gene3D G3DSA:3.90.740.10 221 414 2.7E-56 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PANTHER PTHR11946:SF7 238 263 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PANTHER PTHR11946:SF7 7 205 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PANTHER PTHR11946:SF7 286 449 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PANTHER PTHR11946:SF7 465 812 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PANTHER PTHR11946 238 263 0.0 T 23-04-2016 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PANTHER PTHR11946 7 205 0.0 T 23-04-2016 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PANTHER PTHR11946 286 449 0.0 T 23-04-2016 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PANTHER PTHR11946 465 812 0.0 T 23-04-2016 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 481 499 6.3E-50 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 6.3E-50 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 553 563 6.3E-50 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 6.3E-50 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 520 542 6.3E-50 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 6.3E-50 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 6.3E-50 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CLI_RS01090 13f197208ddf671a41567acde2959f76 813 Pfam PF08264 Anticodon-binding domain of tRNA 658 776 4.1E-22 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CLI_RS14210 e6b0d371647e2b670af7b5246b586b3a 176 PANTHER PTHR11022:SF41 19 135 2.4E-36 T 23-04-2016 CLI_RS14210 e6b0d371647e2b670af7b5246b586b3a 176 PANTHER PTHR11022 19 135 2.4E-36 T 23-04-2016 IPR015510 Peptidoglycan recognition protein GO:0008745|GO:0009253 CLI_RS14210 e6b0d371647e2b670af7b5246b586b3a 176 SMART SM00644 5 132 5.5E-11 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CLI_RS14210 e6b0d371647e2b670af7b5246b586b3a 176 SMART SM00701 6 126 3.1E-6 T 23-04-2016 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 CLI_RS14210 e6b0d371647e2b670af7b5246b586b3a 176 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 17 132 3.7E-18 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CLI_RS14210 e6b0d371647e2b670af7b5246b586b3a 176 SUPERFAMILY SSF55846 15 135 5.76E-41 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CLI_RS14210 e6b0d371647e2b670af7b5246b586b3a 176 Gene3D G3DSA:3.40.80.10 16 140 2.1E-43 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CLI_RS02690 66522f4bbc7af5f016f38941abb326e1 374 PANTHER PTHR30294:SF23 1 374 1.3E-175 T 23-04-2016 CLI_RS02690 66522f4bbc7af5f016f38941abb326e1 374 PANTHER PTHR30294 1 374 1.3E-175 T 23-04-2016 CLI_RS02690 66522f4bbc7af5f016f38941abb326e1 374 Pfam PF12698 ABC-2 family transporter protein 20 366 1.6E-33 T 23-04-2016 CLI_RS17685 02be7ffd5d22513a777d3528c256f616 282 SMART SM00382 37 223 1.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS17685 02be7ffd5d22513a777d3528c256f616 282 Gene3D G3DSA:3.40.50.300 3 238 2.0E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17685 02be7ffd5d22513a777d3528c256f616 282 PANTHER PTHR24220:SF435 6 272 3.3E-115 T 23-04-2016 CLI_RS17685 02be7ffd5d22513a777d3528c256f616 282 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS17685 02be7ffd5d22513a777d3528c256f616 282 PANTHER PTHR24220 6 272 3.3E-115 T 23-04-2016 CLI_RS17685 02be7ffd5d22513a777d3528c256f616 282 Pfam PF00005 ABC transporter 28 175 1.9E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS17685 02be7ffd5d22513a777d3528c256f616 282 SUPERFAMILY SSF52540 4 236 4.33E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17685 02be7ffd5d22513a777d3528c256f616 282 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 5 279 3.1E-122 T 23-04-2016 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 7 481 1.1E-184 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 Gene3D G3DSA:3.30.70.360 204 289 2.9E-5 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 SUPERFAMILY SSF55031 241 390 2.7E-5 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 Pfam PF01546 Peptidase family M20/M25/M40 73 479 1.3E-22 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PIRSF PIRSF016599 1 481 9.6E-190 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PANTHER PTHR11014 202 307 1.5E-166 T 23-04-2016 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PANTHER PTHR11014 390 480 1.5E-166 T 23-04-2016 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PANTHER PTHR11014 1 185 1.5E-166 T 23-04-2016 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PANTHER PTHR11014:SF54 202 307 1.5E-166 T 23-04-2016 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PANTHER PTHR11014:SF54 390 480 1.5E-166 T 23-04-2016 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PANTHER PTHR11014:SF54 1 185 1.5E-166 T 23-04-2016 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 SUPERFAMILY SSF53187 395 480 6.29E-60 T 23-04-2016 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 SUPERFAMILY SSF53187 11 182 6.29E-60 T 23-04-2016 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PRINTS PR00934 X-His dipeptidase (M25) signature 204 221 7.4E-51 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 7.4E-51 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 7.4E-51 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PRINTS PR00934 X-His dipeptidase (M25) signature 448 470 7.4E-51 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 7.4E-51 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PRINTS PR00934 X-His dipeptidase (M25) signature 361 379 7.4E-51 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PRINTS PR00934 X-His dipeptidase (M25) signature 249 268 7.4E-51 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PRINTS PR00934 X-His dipeptidase (M25) signature 426 442 7.4E-51 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 7.4E-51 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 Gene3D G3DSA:3.40.630.10 395 480 1.6E-98 T 23-04-2016 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 Gene3D G3DSA:3.40.630.10 3 181 1.6E-98 T 23-04-2016 CLI_RS11170 e1e0cc95b1ad24f3815a2c650e4ba189 481 Pfam PF07687 Peptidase dimerisation domain 211 290 1.1E-10 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS02340 9fb8a4f049b88bb556d250e6cd2ec9b7 332 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 224 243 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 CLI_RS02340 9fb8a4f049b88bb556d250e6cd2ec9b7 332 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 328 1.5E-115 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CLI_RS02340 9fb8a4f049b88bb556d250e6cd2ec9b7 332 Gene3D G3DSA:3.40.718.10 1 332 4.8E-147 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CLI_RS02340 9fb8a4f049b88bb556d250e6cd2ec9b7 332 SUPERFAMILY SSF53659 1 332 9.02E-135 T 23-04-2016 CLI_RS02340 9fb8a4f049b88bb556d250e6cd2ec9b7 332 PANTHER PTHR11835 2 332 1.2E-202 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 CLI_RS02340 9fb8a4f049b88bb556d250e6cd2ec9b7 332 SMART SM01329 4 328 5.0E-197 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 205 217 1.1E-12 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 378 394 1.1E-12 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 418 432 1.1E-12 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 221 234 1.1E-12 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 463 3.5E-192 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 PANTHER PTHR22594:SF6 1 177 3.2E-247 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 PANTHER PTHR22594:SF6 196 462 3.2E-247 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 Gene3D G3DSA:3.30.930.10 106 459 4.1E-115 T 23-04-2016 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 463 46.391 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 457 4.6E-87 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 PANTHER PTHR22594 1 177 3.2E-247 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 PANTHER PTHR22594 196 462 3.2E-247 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 Gene3D G3DSA:2.40.50.140 13 103 5.3E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 SUPERFAMILY SSF55681 104 461 2.28E-97 T 23-04-2016 CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 SUPERFAMILY SSF50249 13 102 1.77E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS03215 56063d190e9c7b1e4d45f96c46500c20 463 Pfam PF01336 OB-fold nucleic acid binding domain 21 98 1.3E-9 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLI_RS09950 09f1016cd4fcd2c42ef3113fca01c691 331 PANTHER PTHR24365 123 313 4.8E-34 T 23-04-2016 CLI_RS09950 09f1016cd4fcd2c42ef3113fca01c691 331 SMART SM00365 276 297 800.0 T 23-04-2016 CLI_RS09950 09f1016cd4fcd2c42ef3113fca01c691 331 SMART SM00365 188 209 0.15 T 23-04-2016 CLI_RS09950 09f1016cd4fcd2c42ef3113fca01c691 331 SMART SM00365 298 319 600.0 T 23-04-2016 CLI_RS09950 09f1016cd4fcd2c42ef3113fca01c691 331 SMART SM00365 254 275 130.0 T 23-04-2016 CLI_RS09950 09f1016cd4fcd2c42ef3113fca01c691 331 SMART SM00365 166 187 28.0 T 23-04-2016 CLI_RS09950 09f1016cd4fcd2c42ef3113fca01c691 331 SMART SM00365 232 253 290.0 T 23-04-2016 CLI_RS09950 09f1016cd4fcd2c42ef3113fca01c691 331 SMART SM00365 210 231 22.0 T 23-04-2016 CLI_RS09950 09f1016cd4fcd2c42ef3113fca01c691 331 Gene3D G3DSA:3.80.10.10 196 319 8.5E-29 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS09950 09f1016cd4fcd2c42ef3113fca01c691 331 Pfam PF12799 Leucine Rich repeats (2 copies) 167 206 9.5E-8 T 23-04-2016 IPR025875 Leucine rich repeat 4 CLI_RS09950 09f1016cd4fcd2c42ef3113fca01c691 331 Gene3D G3DSA:3.80.10.10 94 195 1.2E-16 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS09950 09f1016cd4fcd2c42ef3113fca01c691 331 SUPERFAMILY SSF52058 83 325 2.04E-39 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS04705 3ade9795f6f8b0ea971b96cd6812399a 403 SUPERFAMILY SSF53474 98 396 1.47E-34 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS04705 3ade9795f6f8b0ea971b96cd6812399a 403 PANTHER PTHR10992 44 243 1.1E-27 T 23-04-2016 CLI_RS04705 3ade9795f6f8b0ea971b96cd6812399a 403 PANTHER PTHR10992 290 401 1.1E-27 T 23-04-2016 CLI_RS04705 3ade9795f6f8b0ea971b96cd6812399a 403 Gene3D G3DSA:3.40.50.1820 96 397 3.8E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS04705 3ade9795f6f8b0ea971b96cd6812399a 403 Pfam PF00561 alpha/beta hydrolase fold 117 382 5.9E-12 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS04705 3ade9795f6f8b0ea971b96cd6812399a 403 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 194 208 9.8E-8 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CLI_RS04705 3ade9795f6f8b0ea971b96cd6812399a 403 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 147 158 9.8E-8 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CLI_RS04705 3ade9795f6f8b0ea971b96cd6812399a 403 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 119 127 9.8E-8 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CLI_RS04705 3ade9795f6f8b0ea971b96cd6812399a 403 PANTHER PTHR10992:SF854 44 243 1.1E-27 T 23-04-2016 CLI_RS04705 3ade9795f6f8b0ea971b96cd6812399a 403 PANTHER PTHR10992:SF854 290 401 1.1E-27 T 23-04-2016 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.5E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 Gene3D G3DSA:2.40.30.10 214 301 1.4E-36 T 23-04-2016 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 6.6E-60 T 23-04-2016 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 SUPERFAMILY SSF52540 4 216 2.36E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 Gene3D G3DSA:2.40.30.10 303 395 1.0E-44 T 23-04-2016 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 60.003 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 1.3E-31 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.4E-221 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.9E-17 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 PANTHER PTHR23115 1 395 3.0E-248 T 23-04-2016 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 SUPERFAMILY SSF50447 207 304 2.75E-29 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 Gene3D G3DSA:3.40.50.300 5 213 2.1E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 SUPERFAMILY SSF50465 305 396 1.81E-34 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLI_RS17850 8ded8c8d9980985f6d6f32c2f162b99e 397 PANTHER PTHR23115:SF112 1 395 3.0E-248 T 23-04-2016 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.5E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 Gene3D G3DSA:2.40.30.10 214 301 1.4E-36 T 23-04-2016 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 6.6E-60 T 23-04-2016 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 SUPERFAMILY SSF52540 4 216 2.36E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 Gene3D G3DSA:2.40.30.10 303 395 1.0E-44 T 23-04-2016 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 60.003 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 1.3E-31 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.4E-221 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.9E-17 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 PANTHER PTHR23115 1 395 3.0E-248 T 23-04-2016 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 SUPERFAMILY SSF50447 207 304 2.75E-29 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 Gene3D G3DSA:3.40.50.300 5 213 2.1E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 SUPERFAMILY SSF50465 305 396 1.81E-34 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLI_RS17920 8ded8c8d9980985f6d6f32c2f162b99e 397 PANTHER PTHR23115:SF112 1 395 3.0E-248 T 23-04-2016 CLI_RS03505 61f3497160a1ed3bd706fda68b8343b9 236 PANTHER PTHR24567:SF32 10 236 2.4E-92 T 23-04-2016 CLI_RS03505 61f3497160a1ed3bd706fda68b8343b9 236 Gene3D G3DSA:2.60.120.10 16 153 1.0E-36 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS03505 61f3497160a1ed3bd706fda68b8343b9 236 Gene3D G3DSA:1.10.10.10 156 235 6.8E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03505 61f3497160a1ed3bd706fda68b8343b9 236 Pfam PF13545 Crp-like helix-turn-helix domain 160 233 1.2E-17 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS03505 61f3497160a1ed3bd706fda68b8343b9 236 SMART SM00100 20 139 2.5E-24 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CLI_RS03505 61f3497160a1ed3bd706fda68b8343b9 236 PANTHER PTHR24567 10 236 2.4E-92 T 23-04-2016 CLI_RS03505 61f3497160a1ed3bd706fda68b8343b9 236 SUPERFAMILY SSF46785 158 235 4.54E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03505 61f3497160a1ed3bd706fda68b8343b9 236 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 200 215 1.1E-8 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS03505 61f3497160a1ed3bd706fda68b8343b9 236 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 184 200 1.1E-8 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS03505 61f3497160a1ed3bd706fda68b8343b9 236 Pfam PF00027 Cyclic nucleotide-binding domain 40 126 1.9E-21 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CLI_RS03505 61f3497160a1ed3bd706fda68b8343b9 236 SMART SM00419 178 227 7.2E-12 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS03505 61f3497160a1ed3bd706fda68b8343b9 236 SUPERFAMILY SSF51206 15 154 8.77E-37 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CLI_RS18565 da4a1820ea72255ef4042adda3526189 314 Gene3D G3DSA:3.30.70.250 124 195 2.2E-27 T 23-04-2016 CLI_RS18565 da4a1820ea72255ef4042adda3526189 314 Gene3D G3DSA:3.40.366.10 2 121 1.3E-70 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CLI_RS18565 da4a1820ea72255ef4042adda3526189 314 Gene3D G3DSA:3.40.366.10 196 306 1.3E-70 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CLI_RS18565 da4a1820ea72255ef4042adda3526189 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 289 1.1E-97 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CLI_RS18565 da4a1820ea72255ef4042adda3526189 314 PIRSF PIRSF000446 1 310 6.1E-101 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 CLI_RS18565 da4a1820ea72255ef4042adda3526189 314 PANTHER PTHR10982 1 307 3.8E-147 T 23-04-2016 CLI_RS18565 da4a1820ea72255ef4042adda3526189 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 3.5E-33 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain CLI_RS18565 da4a1820ea72255ef4042adda3526189 314 SUPERFAMILY SSF52151 189 309 1.05E-73 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CLI_RS18565 da4a1820ea72255ef4042adda3526189 314 SUPERFAMILY SSF52151 4 121 1.05E-73 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CLI_RS18565 da4a1820ea72255ef4042adda3526189 314 SUPERFAMILY SSF55048 129 196 1.57E-16 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CLI_RS18565 da4a1820ea72255ef4042adda3526189 314 Pfam PF00698 Acyl transferase domain 6 286 1.6E-33 T 23-04-2016 IPR014043 Acyl transferase CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 Pfam PF03764 Elongation factor G, domain IV 410 522 7.0E-18 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PRINTS PR00315 GTP-binding elongation factor signature 4 17 6.1E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PRINTS PR00315 GTP-binding elongation factor signature 86 97 6.1E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PRINTS PR00315 GTP-binding elongation factor signature 50 58 6.1E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PRINTS PR00315 GTP-binding elongation factor signature 70 80 6.1E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PRINTS PR00315 GTP-binding elongation factor signature 122 131 6.1E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 SUPERFAMILY SSF54211 408 522 1.33E-25 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 Gene3D G3DSA:3.40.50.300 4 226 8.6E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PANTHER PTHR23115 466 622 6.7E-205 T 23-04-2016 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PANTHER PTHR23115 205 440 6.7E-205 T 23-04-2016 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PANTHER PTHR23115 5 159 6.7E-205 T 23-04-2016 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 SUPERFAMILY SSF50447 216 333 2.12E-18 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 SUPERFAMILY SSF54980 335 409 9.71E-11 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 Pfam PF00009 Elongation factor Tu GTP binding domain 4 227 6.8E-53 T 23-04-2016 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 Gene3D G3DSA:2.40.30.10 235 332 8.9E-20 T 23-04-2016 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 SMART SM00838 524 613 3.9E-5 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 SUPERFAMILY SSF52540 3 226 1.67E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 SUPERFAMILY SSF54980 524 607 1.87E-17 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 Pfam PF00679 Elongation factor G C-terminus 524 607 4.1E-19 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 SMART SM00889 408 522 8.7E-18 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PANTHER PTHR23115:SF91 466 622 6.7E-205 T 23-04-2016 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PANTHER PTHR23115:SF91 205 440 6.7E-205 T 23-04-2016 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PANTHER PTHR23115:SF91 5 159 6.7E-205 T 23-04-2016 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 Gene3D G3DSA:3.30.230.10 412 522 3.4E-24 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 258 284 2.5E-15 T 23-04-2016 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 108 131 2.5E-15 T 23-04-2016 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 205 227 2.5E-15 T 23-04-2016 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 145 7.5E-22 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 Gene3D G3DSA:3.30.70.870 362 411 1.4E-8 T 23-04-2016 CLI_RS10500 1637fe3267cf4076174a6e4e4843e30a 651 Gene3D G3DSA:3.30.70.240 523 606 3.3E-15 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS11210 b2231664ea9f5f5a02848e6445dc83af 154 Pfam PF01047 MarR family 31 86 3.4E-10 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11210 b2231664ea9f5f5a02848e6445dc83af 154 SMART SM00347 22 122 9.3E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11210 b2231664ea9f5f5a02848e6445dc83af 154 SUPERFAMILY SSF46785 7 141 2.69E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11210 b2231664ea9f5f5a02848e6445dc83af 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 2.5E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11210 b2231664ea9f5f5a02848e6445dc83af 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 2.5E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11210 b2231664ea9f5f5a02848e6445dc83af 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 2.5E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11210 b2231664ea9f5f5a02848e6445dc83af 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 2.5E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11210 b2231664ea9f5f5a02848e6445dc83af 154 PANTHER PTHR18964:SF122 19 145 1.3E-28 T 23-04-2016 CLI_RS11210 b2231664ea9f5f5a02848e6445dc83af 154 PANTHER PTHR18964 19 145 1.3E-28 T 23-04-2016 CLI_RS11210 b2231664ea9f5f5a02848e6445dc83af 154 Gene3D G3DSA:1.10.10.10 6 140 6.5E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11210 b2231664ea9f5f5a02848e6445dc83af 154 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 95 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site CLI_RS16365 10749ffca3ed079880e09da19ea9f14e 742 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 6 742 0.0 T 23-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 CLI_RS16365 10749ffca3ed079880e09da19ea9f14e 742 Gene3D G3DSA:3.20.70.20 3 740 2.6E-295 T 23-04-2016 CLI_RS16365 10749ffca3ed079880e09da19ea9f14e 742 Pfam PF02901 Pyruvate formate lyase-like 17 600 1.2E-201 T 23-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 CLI_RS16365 10749ffca3ed079880e09da19ea9f14e 742 PANTHER PTHR30191 1 742 0.0 T 23-04-2016 CLI_RS16365 10749ffca3ed079880e09da19ea9f14e 742 Pfam PF01228 Glycine radical 616 723 1.1E-42 T 23-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CLI_RS16365 10749ffca3ed079880e09da19ea9f14e 742 SUPERFAMILY SSF51998 2 740 3.48E-274 T 23-04-2016 CLI_RS16365 10749ffca3ed079880e09da19ea9f14e 742 PIRSF PIRSF000379 2 742 0.0 T 23-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 CLI_RS16365 10749ffca3ed079880e09da19ea9f14e 742 PANTHER PTHR30191:SF0 1 742 0.0 T 23-04-2016 CLI_RS16365 10749ffca3ed079880e09da19ea9f14e 742 ProSitePatterns PS00850 Glycine radical domain signature. 712 720 - T 23-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CLI_RS10995 225d7dad00fec1e5a04323e84a8f1c3d 272 SUPERFAMILY SSF54862 199 257 2.6E-14 T 23-04-2016 CLI_RS10995 225d7dad00fec1e5a04323e84a8f1c3d 272 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 202 213 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS10995 225d7dad00fec1e5a04323e84a8f1c3d 272 PANTHER PTHR24960:SF20 1 243 3.1E-53 T 23-04-2016 CLI_RS10995 225d7dad00fec1e5a04323e84a8f1c3d 272 Gene3D G3DSA:3.40.50.360 2 158 2.3E-14 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS10995 225d7dad00fec1e5a04323e84a8f1c3d 272 Pfam PF13746 4Fe-4S dicluster domain 192 240 1.9E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS10995 225d7dad00fec1e5a04323e84a8f1c3d 272 SUPERFAMILY SSF52218 4 158 1.48E-17 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS10995 225d7dad00fec1e5a04323e84a8f1c3d 272 PANTHER PTHR24960 1 243 3.1E-53 T 23-04-2016 CLI_RS10995 225d7dad00fec1e5a04323e84a8f1c3d 272 Gene3D G3DSA:3.30.70.20 198 251 7.3E-12 T 23-04-2016 CLI_RS15625 180ee0ccc436da8499d096424659a1ea 119 Pfam PF00453 Ribosomal protein L20 3 109 3.4E-47 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CLI_RS15625 180ee0ccc436da8499d096424659a1ea 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 1.0E-21 T 23-04-2016 CLI_RS15625 180ee0ccc436da8499d096424659a1ea 119 PANTHER PTHR10986 2 118 1.3E-60 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CLI_RS15625 180ee0ccc436da8499d096424659a1ea 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.7E-38 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CLI_RS15625 180ee0ccc436da8499d096424659a1ea 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.7E-38 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CLI_RS15625 180ee0ccc436da8499d096424659a1ea 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.7E-38 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CLI_RS15625 180ee0ccc436da8499d096424659a1ea 119 Gene3D G3DSA:1.10.1900.20 55 117 1.3E-31 T 23-04-2016 CLI_RS15625 180ee0ccc436da8499d096424659a1ea 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CLI_RS15625 180ee0ccc436da8499d096424659a1ea 119 PANTHER PTHR10986:SF12 2 118 1.3E-60 T 23-04-2016 CLI_RS15625 180ee0ccc436da8499d096424659a1ea 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.662 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CLI_RS15625 180ee0ccc436da8499d096424659a1ea 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.6E-48 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CLI_RS15625 180ee0ccc436da8499d096424659a1ea 119 SUPERFAMILY SSF74731 3 117 9.42E-48 T 23-04-2016 CLI_RS07615 d1e7cc0dc64596595a0aaa1882e08cb3 178 Gene3D G3DSA:3.40.50.2020 5 172 5.3E-51 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS07615 d1e7cc0dc64596595a0aaa1882e08cb3 178 Pfam PF00156 Phosphoribosyl transferase domain 6 160 1.0E-22 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS07615 d1e7cc0dc64596595a0aaa1882e08cb3 178 PANTHER PTHR11608 1 178 1.5E-88 T 23-04-2016 CLI_RS07615 d1e7cc0dc64596595a0aaa1882e08cb3 178 SUPERFAMILY SSF53271 6 171 5.24E-43 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS07615 d1e7cc0dc64596595a0aaa1882e08cb3 178 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 177 37.678 T 23-04-2016 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CLI_RS18680 1f48ae8b0bf1d0ad55546e32efa630e4 249 PANTHER PTHR31727 4 229 5.0E-70 T 23-04-2016 CLI_RS18680 1f48ae8b0bf1d0ad55546e32efa630e4 249 SUPERFAMILY SSF54637 145 248 6.32E-25 T 23-04-2016 IPR029069 HotDog domain CLI_RS18680 1f48ae8b0bf1d0ad55546e32efa630e4 249 Pfam PF01643 Acyl-ACP thioesterase 6 248 3.6E-67 T 23-04-2016 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 CLI_RS18680 1f48ae8b0bf1d0ad55546e32efa630e4 249 SUPERFAMILY SSF54637 3 140 4.22E-42 T 23-04-2016 IPR029069 HotDog domain CLI_RS18680 1f48ae8b0bf1d0ad55546e32efa630e4 249 Gene3D G3DSA:3.10.129.10 147 247 4.8E-24 T 23-04-2016 IPR029069 HotDog domain CLI_RS18680 1f48ae8b0bf1d0ad55546e32efa630e4 249 Gene3D G3DSA:3.10.129.10 5 141 7.6E-36 T 23-04-2016 IPR029069 HotDog domain CLI_RS11295 e36650310c9e10266c2aecd489681fc9 242 PANTHER PTHR11935:SF105 129 242 1.4E-102 T 23-04-2016 CLI_RS11295 e36650310c9e10266c2aecd489681fc9 242 PANTHER PTHR11935:SF105 1 113 1.4E-102 T 23-04-2016 CLI_RS11295 e36650310c9e10266c2aecd489681fc9 242 Pfam PF00753 Metallo-beta-lactamase superfamily 24 224 4.4E-23 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS11295 e36650310c9e10266c2aecd489681fc9 242 PANTHER PTHR11935 129 242 1.4E-102 T 23-04-2016 CLI_RS11295 e36650310c9e10266c2aecd489681fc9 242 PANTHER PTHR11935 1 113 1.4E-102 T 23-04-2016 CLI_RS11295 e36650310c9e10266c2aecd489681fc9 242 Gene3D G3DSA:3.60.15.10 23 227 1.1E-40 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS11295 e36650310c9e10266c2aecd489681fc9 242 SUPERFAMILY SSF56281 23 238 4.32E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS11295 e36650310c9e10266c2aecd489681fc9 242 SMART SM00849 19 224 3.8E-31 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05180 fbb93209b5a8dc73a9794a6765c3015c 335 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 327 3.8E-94 T 23-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 CLI_RS05180 fbb93209b5a8dc73a9794a6765c3015c 335 PANTHER PTHR11409 3 333 7.1E-111 T 23-04-2016 CLI_RS05180 fbb93209b5a8dc73a9794a6765c3015c 335 Pfam PF00962 Adenosine/AMP deaminase 6 326 1.8E-72 T 23-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 CLI_RS05180 fbb93209b5a8dc73a9794a6765c3015c 335 Hamap MF_00540 Adenosine deaminase [add]. 1 331 58.633 T 23-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CLI_RS05180 fbb93209b5a8dc73a9794a6765c3015c 335 SUPERFAMILY SSF51556 3 330 1.31E-87 T 23-04-2016 IPR032466 Metal-dependent hydrolase CLI_RS05180 fbb93209b5a8dc73a9794a6765c3015c 335 Gene3D G3DSA:3.20.20.140 3 332 3.3E-104 T 23-04-2016 CLI_RS10000 48a29d331bdb72876735334c421b3ab8 500 PIRSF PIRSF005690 1 490 1.8E-180 T 23-04-2016 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLI_RS10000 48a29d331bdb72876735334c421b3ab8 500 PANTHER PTHR22550 7 500 3.8E-160 T 23-04-2016 CLI_RS10000 48a29d331bdb72876735334c421b3ab8 500 PANTHER PTHR22550:SF5 7 500 3.8E-160 T 23-04-2016 CLI_RS10000 48a29d331bdb72876735334c421b3ab8 500 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 15 475 1.5E-159 T 23-04-2016 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLI_RS07245 d90e7da208d6dd11987145a3e7a1eccc 254 PANTHER PTHR24220:SF594 6 246 1.0E-141 T 23-04-2016 CLI_RS07245 d90e7da208d6dd11987145a3e7a1eccc 254 Gene3D G3DSA:3.40.50.300 2 225 2.0E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07245 d90e7da208d6dd11987145a3e7a1eccc 254 SMART SM00382 33 221 1.0E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS07245 d90e7da208d6dd11987145a3e7a1eccc 254 Pfam PF00005 ABC transporter 24 172 1.5E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS07245 d90e7da208d6dd11987145a3e7a1eccc 254 SUPERFAMILY SSF52540 5 225 1.19E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07245 d90e7da208d6dd11987145a3e7a1eccc 254 PANTHER PTHR24220 6 246 1.0E-141 T 23-04-2016 CLI_RS10340 18004b7bd018d3f5b6b9473cd84fced3 353 Gene3D G3DSA:3.90.550.10 57 249 2.7E-14 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10340 18004b7bd018d3f5b6b9473cd84fced3 353 SUPERFAMILY SSF53448 57 260 2.81E-20 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10340 18004b7bd018d3f5b6b9473cd84fced3 353 PANTHER PTHR22916:SF26 52 239 2.2E-24 T 23-04-2016 CLI_RS10340 18004b7bd018d3f5b6b9473cd84fced3 353 Pfam PF00535 Glycosyl transferase family 2 65 172 5.2E-9 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CLI_RS10340 18004b7bd018d3f5b6b9473cd84fced3 353 PANTHER PTHR22916 52 239 2.2E-24 T 23-04-2016 CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 SUPERFAMILY SSF46548 324 435 2.75E-19 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 PANTHER PTHR11780:SF1 1 439 2.6E-199 T 23-04-2016 CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 104 2.3E-39 T 23-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 Gene3D G3DSA:1.10.1060.10 315 438 1.6E-13 T 23-04-2016 CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 SUPERFAMILY SSF142019 87 293 1.57E-63 T 23-04-2016 CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 439 156.98 T 23-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 Pfam PF10531 SLBB domain 286 334 6.1E-15 T 23-04-2016 IPR019554 Soluble ligand binding domain CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 PANTHER PTHR11780 1 439 2.6E-199 T 23-04-2016 CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 128 273 9.7E-55 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 405 416 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 366 377 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 Pfam PF13187 4Fe-4S dicluster domain 366 418 2.2E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS02045 3eb0a3868d66dc87b4f20c70b58f146e 439 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 3 434 2.4E-173 T 23-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 PANTHER PTHR21499 4 369 9.8E-152 T 23-04-2016 CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 Gene3D G3DSA:3.40.50.720 3 148 1.4E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 Gene3D G3DSA:3.30.360.10 149 299 3.1E-59 T 23-04-2016 CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 Gene3D G3DSA:3.30.70.260 344 414 1.6E-10 T 23-04-2016 CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 Pfam PF01842 ACT domain 345 410 1.0E-12 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 SUPERFAMILY SSF55347 137 302 4.84E-55 T 23-04-2016 CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 SUPERFAMILY SSF51735 3 158 1.36E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 3.0E-19 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 PIRSF PIRSF000098 1 424 3.0E-167 T 23-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 SUPERFAMILY SSF55021 344 416 1.42E-13 T 23-04-2016 CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 PANTHER PTHR21499:SF2 4 369 9.8E-152 T 23-04-2016 CLI_RS08415 15c1045bfb307725003ab1d02869db77 425 Pfam PF00742 Homoserine dehydrogenase 137 315 5.1E-67 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS05435 cd2d384052b16f69d9a009013340cc2d 207 SUPERFAMILY SSF48498 94 202 5.56E-13 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS05435 cd2d384052b16f69d9a009013340cc2d 207 Gene3D G3DSA:1.10.357.10 64 204 1.1E-16 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS05435 cd2d384052b16f69d9a009013340cc2d 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 2.7E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS05435 cd2d384052b16f69d9a009013340cc2d 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 2.7E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS05435 cd2d384052b16f69d9a009013340cc2d 207 PANTHER PTHR30055 16 185 4.8E-20 T 23-04-2016 CLI_RS05435 cd2d384052b16f69d9a009013340cc2d 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 8.2E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS05435 cd2d384052b16f69d9a009013340cc2d 207 Gene3D G3DSA:1.10.10.60 13 63 2.8E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS05435 cd2d384052b16f69d9a009013340cc2d 207 SUPERFAMILY SSF46689 13 70 1.64E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS05435 cd2d384052b16f69d9a009013340cc2d 207 Pfam PF08359 YsiA-like protein, C-terminal region 136 199 2.6E-4 T 23-04-2016 IPR013570 Transcription regulator YsiA, C-terminal CLI_RS14335 352278693bfdbb3a46bc87ccf179ded6 234 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 32.058 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CLI_RS14335 352278693bfdbb3a46bc87ccf179ded6 234 PANTHER PTHR11609 3 233 4.4E-121 T 23-04-2016 CLI_RS14335 352278693bfdbb3a46bc87ccf179ded6 234 Gene3D G3DSA:3.30.470.20 94 219 1.9E-51 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS14335 352278693bfdbb3a46bc87ccf179ded6 234 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CLI_RS14335 352278693bfdbb3a46bc87ccf179ded6 234 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 232 7.1E-72 T 23-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CLI_RS14335 352278693bfdbb3a46bc87ccf179ded6 234 SUPERFAMILY SSF56104 3 232 5.23E-81 T 23-04-2016 CLI_RS14335 352278693bfdbb3a46bc87ccf179ded6 234 Gene3D G3DSA:3.30.200.20 6 93 1.3E-40 T 23-04-2016 CLI_RS14335 352278693bfdbb3a46bc87ccf179ded6 234 Pfam PF01259 SAICAR synthetase 6 231 5.6E-66 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CLI_RS14335 352278693bfdbb3a46bc87ccf179ded6 234 PANTHER PTHR11609:SF2 3 233 4.4E-121 T 23-04-2016 CLI_RS14335 352278693bfdbb3a46bc87ccf179ded6 234 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CLI_RS17885 8b9fccbb83bad015a2ac15bd894f9473 122 Gene3D G3DSA:3.30.1390.10 51 122 8.0E-33 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLI_RS17885 8b9fccbb83bad015a2ac15bd894f9473 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 2.0E-20 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 CLI_RS17885 8b9fccbb83bad015a2ac15bd894f9473 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 6.9E-30 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 CLI_RS17885 8b9fccbb83bad015a2ac15bd894f9473 122 SUPERFAMILY SSF48300 1 58 1.06E-17 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17885 8b9fccbb83bad015a2ac15bd894f9473 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 2 50 5.0E-22 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17885 8b9fccbb83bad015a2ac15bd894f9473 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 25.243 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17885 8b9fccbb83bad015a2ac15bd894f9473 122 SUPERFAMILY SSF54736 51 122 1.92E-24 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLI_RS17885 8b9fccbb83bad015a2ac15bd894f9473 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 122 2.4E-48 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17885 8b9fccbb83bad015a2ac15bd894f9473 122 Gene3D G3DSA:1.20.5.710 1 50 1.3E-23 T 23-04-2016 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 833 840 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Gene3D G3DSA:3.30.1490.20 685 741 2.6E-20 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 543 4.9E-36 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 9.2E-82 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 669 870 2.8E-34 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Gene3D G3DSA:3.30.470.20 742 927 1.8E-64 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Gene3D G3DSA:3.30.470.20 201 397 6.9E-76 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Gene3D G3DSA:3.40.50.20 535 657 7.6E-56 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Gene3D G3DSA:3.30.1490.20 142 200 1.2E-21 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 705 719 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 PANTHER PTHR11405 1 1050 0.0 T 23-04-2016 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 4 1049 0.0 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 SUPERFAMILY SSF52335 939 1051 5.36E-31 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1066 13.264 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 SUPERFAMILY SSF52440 1 126 1.58E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 PANTHER PTHR11405:SF5 1 1050 0.0 T 23-04-2016 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1061 12.923 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 SMART SM00851 953 1040 7.8E-29 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Pfam PF02142 MGS-like domain 954 1040 6.8E-20 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 SUPERFAMILY SSF48108 395 548 1.28E-43 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Gene3D G3DSA:3.40.50.20 4 108 2.0E-43 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Gene3D G3DSA:3.40.50.1380 937 1050 5.0E-36 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 SUPERFAMILY SSF56059 128 399 4.24E-106 T 23-04-2016 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.9E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.9E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.9E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.9E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.9E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.9E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.9E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 SUPERFAMILY SSF56059 669 930 6.01E-93 T 23-04-2016 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 Gene3D G3DSA:1.10.1030.10 398 534 6.4E-44 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 SUPERFAMILY SSF52440 553 671 7.34E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS09000 fc874c12a1478e36f41350cda9c9e0e0 1068 SMART SM01096 420 543 4.0E-59 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS10635 28af59691ea2a79dad5f59b9aac1ba23 229 Pfam PF07729 FCD domain 95 217 9.2E-25 T 23-04-2016 IPR011711 GntR, C-terminal CLI_RS10635 28af59691ea2a79dad5f59b9aac1ba23 229 PANTHER PTHR11751:SF342 1 111 2.2E-30 T 23-04-2016 CLI_RS10635 28af59691ea2a79dad5f59b9aac1ba23 229 SMART SM00345 15 74 4.6E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS10635 28af59691ea2a79dad5f59b9aac1ba23 229 Gene3D G3DSA:1.20.120.530 90 228 9.6E-29 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal CLI_RS10635 28af59691ea2a79dad5f59b9aac1ba23 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 5.4E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS10635 28af59691ea2a79dad5f59b9aac1ba23 229 SUPERFAMILY SSF46785 5 78 2.86E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10635 28af59691ea2a79dad5f59b9aac1ba23 229 PANTHER PTHR11751 1 111 2.2E-30 T 23-04-2016 CLI_RS10635 28af59691ea2a79dad5f59b9aac1ba23 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.1E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS10635 28af59691ea2a79dad5f59b9aac1ba23 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.1E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS10635 28af59691ea2a79dad5f59b9aac1ba23 229 SUPERFAMILY SSF48008 91 226 3.66E-27 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal CLI_RS10635 28af59691ea2a79dad5f59b9aac1ba23 229 SMART SM00895 95 219 9.6E-22 T 23-04-2016 IPR011711 GntR, C-terminal CLI_RS10635 28af59691ea2a79dad5f59b9aac1ba23 229 Gene3D G3DSA:1.10.10.10 4 78 2.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS16995 335a325b61eb75e68cc9567654b6a785 237 PANTHER PTHR11735:SF11 1 151 1.5E-47 T 23-04-2016 CLI_RS16995 335a325b61eb75e68cc9567654b6a785 237 Pfam PF00814 Glycoprotease family 32 224 2.8E-26 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLI_RS16995 335a325b61eb75e68cc9567654b6a785 237 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 219 4.9E-51 T 23-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 CLI_RS16995 335a325b61eb75e68cc9567654b6a785 237 PANTHER PTHR11735 1 151 1.5E-47 T 23-04-2016 CLI_RS16995 335a325b61eb75e68cc9567654b6a785 237 Gene3D G3DSA:3.30.420.40 1 119 7.8E-33 T 23-04-2016 CLI_RS16995 335a325b61eb75e68cc9567654b6a785 237 SUPERFAMILY SSF53067 108 217 1.49E-13 T 23-04-2016 CLI_RS16995 335a325b61eb75e68cc9567654b6a785 237 SUPERFAMILY SSF53067 1 102 3.28E-24 T 23-04-2016 CLI_RS16995 335a325b61eb75e68cc9567654b6a785 237 Gene3D G3DSA:3.30.420.40 120 176 6.2E-6 T 23-04-2016 CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 408 2.5E-129 T 23-04-2016 IPR008135 Competence-induced protein CinA CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 262 408 1.5E-44 T 23-04-2016 IPR008136 CinA, C-terminal CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 PANTHER PTHR13939:SF0 1 409 2.5E-209 T 23-04-2016 CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 Pfam PF02464 Competence-damaged protein 255 407 6.5E-57 T 23-04-2016 IPR008136 CinA, C-terminal CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 SUPERFAMILY SSF142433 249 408 1.19E-55 T 23-04-2016 IPR008136 CinA, C-terminal CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 Gene3D G3DSA:3.90.950.20 248 408 1.3E-58 T 23-04-2016 IPR008136 CinA, C-terminal CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 PIRSF PIRSF006728 1 409 7.1E-160 T 23-04-2016 IPR008135 Competence-induced protein CinA CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 409 173.207 T 23-04-2016 IPR008135 Competence-induced protein CinA CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 Pfam PF00994 Probable molybdopterin binding domain 5 170 3.0E-37 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 164 6.4E-31 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 SMART SM00852 4 170 2.0E-42 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 PANTHER PTHR13939 1 409 2.5E-209 T 23-04-2016 CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 SUPERFAMILY SSF53218 1 203 1.09E-41 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS01220 02761bb353bb4dd5e9cb0c15b6337e9a 409 Gene3D G3DSA:3.40.980.10 1 208 9.1E-39 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 Gene3D G3DSA:3.40.50.1780 178 245 2.3E-48 T 23-04-2016 CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 Gene3D G3DSA:3.40.50.1780 289 400 2.3E-48 T 23-04-2016 CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 PANTHER PTHR11615 91 483 3.6E-154 T 23-04-2016 CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 SUPERFAMILY SSF53920 187 460 6.93E-71 T 23-04-2016 IPR009016 Iron hydrogenase CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 SUPERFAMILY SSF54862 131 209 1.47E-19 T 23-04-2016 CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 TIGRFAM TIGR04105 FeFe_hydrog_B1: [FeFe] hydrogenase, group B1/B3 4 459 8.1E-189 T 23-04-2016 IPR027631 [FeFe] hydrogenase, group B1/B3 CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 Gene3D G3DSA:3.30.70.20 107 157 7.4E-12 T 23-04-2016 CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 Pfam PF12838 4Fe-4S dicluster domain 163 202 8.2E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 220 454 3.7E-65 T 23-04-2016 IPR004108 Iron hydrogenase, large subunit, C-terminal CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 PANTHER PTHR11615:SF158 91 483 3.6E-154 T 23-04-2016 CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS16895 7389dcc34285f8c7cf2d48ff7af90791 497 Pfam PF00037 4Fe-4S binding domain 135 156 1.8E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS13015 5937c6de352a5d60b5470a4559a9a543 1621 SUPERFAMILY SSF109604 163 314 7.18E-10 T 23-04-2016 CLI_RS13015 5937c6de352a5d60b5470a4559a9a543 1621 Gene3D G3DSA:1.25.10.10 660 730 9.2E-10 T 23-04-2016 IPR011989 Armadillo-like helical CLI_RS13015 5937c6de352a5d60b5470a4559a9a543 1621 Gene3D G3DSA:1.25.10.10 774 856 9.2E-10 T 23-04-2016 IPR011989 Armadillo-like helical CLI_RS13015 5937c6de352a5d60b5470a4559a9a543 1621 Gene3D G3DSA:1.25.10.10 394 626 9.2E-10 T 23-04-2016 IPR011989 Armadillo-like helical CLI_RS13015 5937c6de352a5d60b5470a4559a9a543 1621 SUPERFAMILY SSF48371 387 464 1.89E-14 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 CLI_RS13015 5937c6de352a5d60b5470a4559a9a543 1621 SUPERFAMILY SSF48371 526 613 1.89E-14 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 CLI_RS13015 5937c6de352a5d60b5470a4559a9a543 1621 SUPERFAMILY SSF48371 661 854 1.89E-14 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 CLI_RS13015 5937c6de352a5d60b5470a4559a9a543 1621 Gene3D G3DSA:3.40.50.620 918 1114 4.9E-29 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS13015 5937c6de352a5d60b5470a4559a9a543 1621 Pfam PF01467 Cytidylyltransferase-like 922 1082 3.1E-6 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLI_RS13015 5937c6de352a5d60b5470a4559a9a543 1621 SUPERFAMILY SSF52374 919 1113 1.06E-19 T 23-04-2016 CLI_RS13015 5937c6de352a5d60b5470a4559a9a543 1621 Gene3D G3DSA:1.10.3210.10 171 284 5.6E-6 T 23-04-2016 IPR006674 HD domain CLI_RS16270 b7ca45fed27c54737dd37816b62771d6 334 Pfam PF01012 Electron transfer flavoprotein domain 9 187 2.7E-46 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS16270 b7ca45fed27c54737dd37816b62771d6 334 SUPERFAMILY SSF52402 7 201 4.95E-58 T 23-04-2016 CLI_RS16270 b7ca45fed27c54737dd37816b62771d6 334 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 210 292 4.8E-36 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CLI_RS16270 b7ca45fed27c54737dd37816b62771d6 334 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 273 299 - T 23-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CLI_RS16270 b7ca45fed27c54737dd37816b62771d6 334 Gene3D G3DSA:3.40.50.620 7 201 2.8E-79 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS16270 b7ca45fed27c54737dd37816b62771d6 334 PIRSF PIRSF000089 5 334 8.8E-118 T 23-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 CLI_RS16270 b7ca45fed27c54737dd37816b62771d6 334 SUPERFAMILY SSF52467 210 328 1.8E-46 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS16270 b7ca45fed27c54737dd37816b62771d6 334 PANTHER PTHR10909 140 328 6.9E-50 T 23-04-2016 CLI_RS16270 b7ca45fed27c54737dd37816b62771d6 334 Gene3D G3DSA:3.40.50.1220 206 330 1.0E-54 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS16270 b7ca45fed27c54737dd37816b62771d6 334 SMART SM00893 9 198 6.1E-55 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS16270 b7ca45fed27c54737dd37816b62771d6 334 PANTHER PTHR10909:SF299 140 328 6.9E-50 T 23-04-2016 CLI_RS06600 51fe666ac03891081439e058fad152fd 119 PANTHER PTHR41335 1 114 1.9E-31 T 23-04-2016 CLI_RS06600 51fe666ac03891081439e058fad152fd 119 Pfam PF06305 Protein of unknown function (DUF1049) 21 81 1.8E-11 T 23-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CLI_RS15845 3ed19919d61d153e261e26b29e074fc3 78 SMART SM00530 1 59 1.6E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS15845 3ed19919d61d153e261e26b29e074fc3 78 Pfam PF01381 Helix-turn-helix 2 58 3.4E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS15845 3ed19919d61d153e261e26b29e074fc3 78 SUPERFAMILY SSF47413 2 41 3.75E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS15845 3ed19919d61d153e261e26b29e074fc3 78 Gene3D G3DSA:1.10.260.40 2 56 4.7E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS13895 11f975093fbbf704a91dc6f10e131b3b 381 PANTHER PTHR35789:SF1 13 381 2.5E-128 T 23-04-2016 CLI_RS13895 11f975093fbbf704a91dc6f10e131b3b 381 PANTHER PTHR35789 13 381 2.5E-128 T 23-04-2016 CLI_RS13895 11f975093fbbf704a91dc6f10e131b3b 381 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 216 377 7.5E-21 T 23-04-2016 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 Gene3D G3DSA:1.10.1060.10 166 204 2.5E-6 T 23-04-2016 CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 Pfam PF12724 Flavodoxin domain 5 90 1.1E-9 T 23-04-2016 IPR026816 Flavodoxin domain CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 PANTHER PTHR24960:SF20 5 246 1.8E-55 T 23-04-2016 CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 SUPERFAMILY SSF54862 195 257 2.93E-16 T 23-04-2016 CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 Gene3D G3DSA:3.30.70.20 205 252 6.3E-14 T 23-04-2016 CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 198 209 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 226 237 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 SUPERFAMILY SSF52218 1 145 4.59E-20 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 Pfam PF00037 4Fe-4S binding domain 221 241 7.0E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 Pfam PF00037 4Fe-4S binding domain 195 213 8.2E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 PANTHER PTHR24960 5 246 1.8E-55 T 23-04-2016 CLI_RS00220 862781e757ee9f575e1d67b67126c1b1 262 Gene3D G3DSA:3.40.50.360 5 165 6.8E-23 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 PANTHER PTHR11751 91 114 2.0E-49 T 23-04-2016 CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 PANTHER PTHR11751 1 75 2.0E-49 T 23-04-2016 CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 SUPERFAMILY SSF46785 4 77 5.96E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 SMART SM00895 98 223 6.7E-17 T 23-04-2016 IPR011711 GntR, C-terminal CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 SUPERFAMILY SSF48008 96 227 2.04E-23 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 7.7E-22 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 Gene3D G3DSA:1.10.10.10 7 75 1.4E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 Pfam PF07729 FCD domain 98 222 3.3E-23 T 23-04-2016 IPR011711 GntR, C-terminal CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 PANTHER PTHR11751:SF382 91 114 2.0E-49 T 23-04-2016 CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 PANTHER PTHR11751:SF382 1 75 2.0E-49 T 23-04-2016 CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.6E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.6E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 SMART SM00345 14 73 3.5E-21 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS05725 d3c2e4005aebe6e82cd39aac2c97b9b5 230 Gene3D G3DSA:1.20.120.530 97 228 7.2E-27 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal CLI_RS01280 62a61f24f472adfde6d542ef18aa0097 241 PANTHER PTHR10587:SF15 38 230 9.1E-53 T 23-04-2016 CLI_RS01280 62a61f24f472adfde6d542ef18aa0097 241 PANTHER PTHR10587 38 230 9.1E-53 T 23-04-2016 CLI_RS01280 62a61f24f472adfde6d542ef18aa0097 241 Gene3D G3DSA:3.20.20.370 14 230 8.8E-61 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS01280 62a61f24f472adfde6d542ef18aa0097 241 SUPERFAMILY SSF88713 36 231 1.45E-53 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLI_RS01280 62a61f24f472adfde6d542ef18aa0097 241 Pfam PF01522 Polysaccharide deacetylase 35 143 7.1E-31 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS10300 6c6f7a997ee85faeef0788447fe0e08b 647 SUPERFAMILY SSF53300 437 602 1.05E-15 T 23-04-2016 IPR002035 von Willebrand factor, type A CLI_RS10300 6c6f7a997ee85faeef0788447fe0e08b 647 Gene3D G3DSA:3.40.50.410 436 605 6.9E-11 T 23-04-2016 IPR002035 von Willebrand factor, type A CLI_RS10300 6c6f7a997ee85faeef0788447fe0e08b 647 SMART SM00327 436 631 1.4E-6 T 23-04-2016 IPR002035 von Willebrand factor, type A CLI_RS10300 6c6f7a997ee85faeef0788447fe0e08b 647 Pfam PF00092 von Willebrand factor type A domain 439 602 2.7E-9 T 23-04-2016 IPR002035 von Willebrand factor, type A CLI_RS12415 6fe63fdf2e7362ed9f6997aed1c5e036 434 PANTHER PTHR11780:SF1 7 309 4.0E-106 T 23-04-2016 CLI_RS12415 6fe63fdf2e7362ed9f6997aed1c5e036 434 Pfam PF13375 RnfC Barrel sandwich hybrid domain 3 61 2.9E-12 T 23-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain CLI_RS12415 6fe63fdf2e7362ed9f6997aed1c5e036 434 SUPERFAMILY SSF142984 254 309 1.09E-5 T 23-04-2016 CLI_RS12415 6fe63fdf2e7362ed9f6997aed1c5e036 434 PANTHER PTHR11780 7 309 4.0E-106 T 23-04-2016 CLI_RS12415 6fe63fdf2e7362ed9f6997aed1c5e036 434 SUPERFAMILY SSF142019 42 245 2.48E-50 T 23-04-2016 CLI_RS12415 6fe63fdf2e7362ed9f6997aed1c5e036 434 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 84 227 1.5E-42 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CLI_RS12415 6fe63fdf2e7362ed9f6997aed1c5e036 434 TIGRFAM TIGR04481 PR_assoc_PrdC: proline reductase-associated electron transfer protein PrdC 5 429 1.6E-199 T 23-04-2016 IPR031001 Proline reductase-associated electron transfer protein PrdC CLI_RS12350 eb3604df87a2f5e2b33b38ade378b15b 289 PANTHER PTHR30269 34 289 2.0E-89 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS12350 eb3604df87a2f5e2b33b38ade378b15b 289 PANTHER PTHR30269:SF15 34 289 2.0E-89 T 23-04-2016 CLI_RS12350 eb3604df87a2f5e2b33b38ade378b15b 289 Pfam PF01925 Sulfite exporter TauE/SafE 3 148 6.6E-12 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 Gene3D G3DSA:1.10.10.10 81 154 1.4E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 Gene3D G3DSA:1.10.10.10 3 47 1.9E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 PANTHER PTHR30185:SF5 552 697 3.8E-282 T 23-04-2016 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 Pfam PF08279 HTH domain 94 151 8.4E-9 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 Pfam PF08279 HTH domain 7 51 3.7E-6 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 SUPERFAMILY SSF46785 90 134 9.0E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 PANTHER PTHR30185 552 697 3.8E-282 T 23-04-2016 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 Gene3D G3DSA:3.40.930.10 550 696 3.5E-52 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 SUPERFAMILY SSF52794 405 491 9.16E-11 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 Gene3D G3DSA:1.10.1790.10 302 397 1.8E-23 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 Gene3D G3DSA:1.10.1790.10 189 283 9.5E-22 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 SUPERFAMILY SSF55804 552 696 1.96E-36 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 602 618 - T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 Gene3D G3DSA:3.40.50.270 407 484 1.1E-10 T 23-04-2016 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 SUPERFAMILY SSF63520 181 282 1.57E-21 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 407 483 2.3E-7 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 Pfam PF00874 PRD domain 305 393 1.1E-22 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 Pfam PF00874 PRD domain 197 282 1.9E-19 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 SUPERFAMILY SSF63520 296 398 1.7E-23 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 PANTHER PTHR30185:SF5 1 517 3.8E-282 T 23-04-2016 CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 555 695 3.1E-34 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS10760 c35da2b251b9f4041a087f86c22c303e 697 PANTHER PTHR30185 1 517 3.8E-282 T 23-04-2016 CLI_RS12840 997f00390d764fac01115903ef2dbfa0 162 Pfam PF05239 PRC-barrel domain 7 67 5.4E-6 T 23-04-2016 IPR027275 PRC-barrel domain CLI_RS12840 997f00390d764fac01115903ef2dbfa0 162 Pfam PF05239 PRC-barrel domain 75 130 7.3E-8 T 23-04-2016 IPR027275 PRC-barrel domain CLI_RS12840 997f00390d764fac01115903ef2dbfa0 162 SUPERFAMILY SSF50346 75 135 8.32E-8 T 23-04-2016 IPR011033 PRC-barrel-like CLI_RS12840 997f00390d764fac01115903ef2dbfa0 162 Gene3D G3DSA:2.30.30.240 5 69 1.1E-8 T 23-04-2016 CLI_RS12840 997f00390d764fac01115903ef2dbfa0 162 Gene3D G3DSA:2.30.30.240 76 130 2.8E-6 T 23-04-2016 CLI_RS12840 997f00390d764fac01115903ef2dbfa0 162 SUPERFAMILY SSF50346 1 67 3.14E-8 T 23-04-2016 IPR011033 PRC-barrel-like CLI_RS16720 fa7f392ab219177cd251c16f59513c2c 485 Pfam PF01425 Amidase 24 464 4.4E-161 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLI_RS16720 fa7f392ab219177cd251c16f59513c2c 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 477 2.8E-198 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLI_RS16720 fa7f392ab219177cd251c16f59513c2c 485 PANTHER PTHR11895:SF7 2 483 7.2E-226 T 23-04-2016 CLI_RS16720 fa7f392ab219177cd251c16f59513c2c 485 SUPERFAMILY SSF75304 1 482 6.67E-163 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLI_RS16720 fa7f392ab219177cd251c16f59513c2c 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 94.414 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLI_RS16720 fa7f392ab219177cd251c16f59513c2c 485 PANTHER PTHR11895 2 483 7.2E-226 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLI_RS16720 fa7f392ab219177cd251c16f59513c2c 485 Gene3D G3DSA:3.90.1300.10 2 482 3.2E-179 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLI_RS16720 fa7f392ab219177cd251c16f59513c2c 485 ProSitePatterns PS00571 Amidases signature. 152 183 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLI_RS01285 0cadc209e497e8532c12531343042138 457 PANTHER PTHR32248:SF4 2 457 4.7E-149 T 23-04-2016 CLI_RS01285 0cadc209e497e8532c12531343042138 457 Pfam PF04552 Sigma-54, DNA binding domain 296 456 1.6E-56 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding CLI_RS01285 0cadc209e497e8532c12531343042138 457 PRINTS PR00045 Sigma-54 factor signature 167 184 3.3E-22 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLI_RS01285 0cadc209e497e8532c12531343042138 457 PRINTS PR00045 Sigma-54 factor signature 371 382 3.3E-22 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLI_RS01285 0cadc209e497e8532c12531343042138 457 PRINTS PR00045 Sigma-54 factor signature 431 449 3.3E-22 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLI_RS01285 0cadc209e497e8532c12531343042138 457 PRINTS PR00045 Sigma-54 factor signature 355 367 3.3E-22 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLI_RS01285 0cadc209e497e8532c12531343042138 457 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 50 1.6E-17 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLI_RS01285 0cadc209e497e8532c12531343042138 457 PANTHER PTHR32248 2 457 4.7E-149 T 23-04-2016 CLI_RS01285 0cadc209e497e8532c12531343042138 457 Gene3D G3DSA:1.10.10.10 321 380 3.4E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01285 0cadc209e497e8532c12531343042138 457 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 455 4.1E-132 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLI_RS01285 0cadc209e497e8532c12531343042138 457 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 343 362 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLI_RS01285 0cadc209e497e8532c12531343042138 457 Pfam PF04963 Sigma-54 factor, core binding domain 96 282 1.6E-49 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CLI_RS01285 0cadc209e497e8532c12531343042138 457 PIRSF PIRSF000774 1 457 5.7E-140 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLI_RS01285 0cadc209e497e8532c12531343042138 457 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 436 443 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLI_RS17345 1a28476164d8c4657b3fdbe25eb3806a 202 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 191 9.2E-38 T 23-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CLI_RS17345 1a28476164d8c4657b3fdbe25eb3806a 202 PANTHER PTHR35531:SF1 1 65 1.9E-52 T 23-04-2016 CLI_RS17345 1a28476164d8c4657b3fdbe25eb3806a 202 PANTHER PTHR35531:SF1 100 200 1.9E-52 T 23-04-2016 CLI_RS17345 1a28476164d8c4657b3fdbe25eb3806a 202 PANTHER PTHR35531 1 65 1.9E-52 T 23-04-2016 CLI_RS17345 1a28476164d8c4657b3fdbe25eb3806a 202 PANTHER PTHR35531 100 200 1.9E-52 T 23-04-2016 CLI_RS06005 2bf2dc70265c62edb45d71594691d90d 311 Pfam PF00005 ABC transporter 18 160 1.7E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS06005 2bf2dc70265c62edb45d71594691d90d 311 PANTHER PTHR24220:SF150 4 253 2.1E-119 T 23-04-2016 CLI_RS06005 2bf2dc70265c62edb45d71594691d90d 311 SUPERFAMILY SSF52540 3 239 4.13E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06005 2bf2dc70265c62edb45d71594691d90d 311 Gene3D G3DSA:3.40.50.300 3 233 2.5E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06005 2bf2dc70265c62edb45d71594691d90d 311 SMART SM00382 27 210 1.6E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06005 2bf2dc70265c62edb45d71594691d90d 311 Pfam PF08402 TOBE domain 248 309 5.4E-6 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CLI_RS06005 2bf2dc70265c62edb45d71594691d90d 311 SUPERFAMILY SSF50331 244 309 6.89E-7 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal CLI_RS06005 2bf2dc70265c62edb45d71594691d90d 311 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS06005 2bf2dc70265c62edb45d71594691d90d 311 PANTHER PTHR24220 4 253 2.1E-119 T 23-04-2016 CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 SUPERFAMILY SSF47917 346 461 3.4E-52 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 Gene3D G3DSA:2.40.10.170 3 75 2.0E-29 T 23-04-2016 CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 SUPERFAMILY SSF50615 3 75 1.57E-23 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 Gene3D G3DSA:1.10.1140.10 346 462 3.8E-51 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 PANTHER PTHR15184 2 462 0.0 T 23-04-2016 CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 4 461 4.5E-253 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 7 74 2.2E-19 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 SMART SM00382 143 328 1.8E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 Hamap MF_01347 ATP synthase subunit beta [atpB]. 2 461 58.205 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 Gene3D G3DSA:3.40.50.300 77 345 1.4E-112 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 SUPERFAMILY SSF52540 78 348 1.6E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 343 3.0E-68 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 PANTHER PTHR15184:SF8 2 462 0.0 T 23-04-2016 CLI_RS00920 8e73afb4979327f1f5426154468fe4ed 463 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 334 343 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS04130 e618da4146feead93c3ba357d1453d4b 262 Pfam PF00005 ABC transporter 24 167 2.3E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS04130 e618da4146feead93c3ba357d1453d4b 262 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS04130 e618da4146feead93c3ba357d1453d4b 262 Gene3D G3DSA:3.40.50.300 3 234 1.1E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04130 e618da4146feead93c3ba357d1453d4b 262 PANTHER PTHR24220:SF141 10 250 1.3E-130 T 23-04-2016 CLI_RS04130 e618da4146feead93c3ba357d1453d4b 262 PANTHER PTHR24220 10 250 1.3E-130 T 23-04-2016 CLI_RS04130 e618da4146feead93c3ba357d1453d4b 262 SUPERFAMILY SSF52540 4 229 2.77E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04130 e618da4146feead93c3ba357d1453d4b 262 SMART SM00382 33 215 1.8E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS10990 bdb1619b39e5820005f4c2ac46c37035 404 SUPERFAMILY SSF89796 6 403 6.28E-100 T 23-04-2016 IPR023606 CoA-transferase family III domain CLI_RS10990 bdb1619b39e5820005f4c2ac46c37035 404 Pfam PF02515 CoA-transferase family III 8 380 2.2E-92 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 CLI_RS10990 bdb1619b39e5820005f4c2ac46c37035 404 Gene3D G3DSA:3.30.1540.10 232 311 5.9E-16 T 23-04-2016 CLI_RS10990 bdb1619b39e5820005f4c2ac46c37035 404 PANTHER PTHR24023 34 390 7.2E-32 T 23-04-2016 CLI_RS10990 bdb1619b39e5820005f4c2ac46c37035 404 Gene3D G3DSA:3.40.50.10540 6 223 4.5E-88 T 23-04-2016 IPR023606 CoA-transferase family III domain CLI_RS10990 bdb1619b39e5820005f4c2ac46c37035 404 Gene3D G3DSA:3.40.50.10540 312 403 4.5E-88 T 23-04-2016 IPR023606 CoA-transferase family III domain CLI_RS10990 bdb1619b39e5820005f4c2ac46c37035 404 PANTHER PTHR24023:SF593 34 390 7.2E-32 T 23-04-2016 CLI_RS11460 24de899f7dc05150a90568eb7c7e5be4 278 Gene3D G3DSA:3.60.15.10 8 266 5.7E-26 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS11460 24de899f7dc05150a90568eb7c7e5be4 278 SUPERFAMILY SSF56281 12 278 6.09E-27 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS11460 24de899f7dc05150a90568eb7c7e5be4 278 PANTHER PTHR13754:SF13 1 278 1.8E-106 T 23-04-2016 CLI_RS11460 24de899f7dc05150a90568eb7c7e5be4 278 PANTHER PTHR13754 1 278 1.8E-106 T 23-04-2016 CLI_RS11460 24de899f7dc05150a90568eb7c7e5be4 278 Pfam PF00753 Metallo-beta-lactamase superfamily 25 114 1.4E-11 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS08585 3831b51d82f622eb38d51dd8a35e3e25 187 PANTHER PTHR30328 1 187 1.3E-42 T 23-04-2016 CLI_RS08585 3831b51d82f622eb38d51dd8a35e3e25 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 5 49 1.3E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS08585 3831b51d82f622eb38d51dd8a35e3e25 187 PANTHER PTHR30328:SF6 1 187 1.3E-42 T 23-04-2016 CLI_RS08585 3831b51d82f622eb38d51dd8a35e3e25 187 SUPERFAMILY SSF46689 2 57 2.82E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08585 3831b51d82f622eb38d51dd8a35e3e25 187 Gene3D G3DSA:1.10.357.10 51 183 8.4E-12 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS08585 3831b51d82f622eb38d51dd8a35e3e25 187 Gene3D G3DSA:1.10.10.60 2 50 2.1E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08585 3831b51d82f622eb38d51dd8a35e3e25 187 SUPERFAMILY SSF48498 76 182 8.36E-10 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS14460 d6b34ee143f9ccefc7a4d68ba74fe6e6 763 Gene3D G3DSA:3.40.50.300 513 603 2.2E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14460 d6b34ee143f9ccefc7a4d68ba74fe6e6 763 Gene3D G3DSA:3.40.50.300 202 310 2.2E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14460 d6b34ee143f9ccefc7a4d68ba74fe6e6 763 PANTHER PTHR11070 462 758 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS14460 d6b34ee143f9ccefc7a4d68ba74fe6e6 763 PANTHER PTHR11070 92 374 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS14460 d6b34ee143f9ccefc7a4d68ba74fe6e6 763 Pfam PF13245 Part of AAA domain 219 292 2.5E-11 T 23-04-2016 CLI_RS14460 d6b34ee143f9ccefc7a4d68ba74fe6e6 763 PANTHER PTHR11070:SF18 462 758 0.0 T 23-04-2016 CLI_RS14460 d6b34ee143f9ccefc7a4d68ba74fe6e6 763 PANTHER PTHR11070:SF18 92 374 0.0 T 23-04-2016 CLI_RS14460 d6b34ee143f9ccefc7a4d68ba74fe6e6 763 SUPERFAMILY SSF52540 202 319 3.66E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14460 d6b34ee143f9ccefc7a4d68ba74fe6e6 763 SUPERFAMILY SSF52540 483 755 3.66E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14460 d6b34ee143f9ccefc7a4d68ba74fe6e6 763 Gene3D G3DSA:3.40.50.300 604 761 4.1E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 SUPERFAMILY SSF54713 152 305 8.9E-51 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 Gene3D G3DSA:3.30.479.20 55 149 1.4E-21 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 Pfam PF00889 Elongation factor TS 71 286 6.1E-70 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 SUPERFAMILY SSF54713 54 147 1.57E-19 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 Gene3D G3DSA:1.10.286.20 200 243 2.2E-21 T 23-04-2016 CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 SUPERFAMILY SSF46934 2 53 2.52E-20 T 23-04-2016 IPR009060 UBA-like GO:0005515 CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 Gene3D G3DSA:3.30.479.20 244 285 1.1E-24 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 Gene3D G3DSA:3.30.479.20 153 195 1.1E-24 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 2 304 9.5E-96 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 PANTHER PTHR11741 2 306 1.4E-143 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 Hamap MF_00050 Elongation factor Ts [tsf]. 1 303 75.636 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 ProSitePatterns PS01126 Elongation factor Ts signature 1. 10 25 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 CLI_RS12145 991e5aec78647db79dc596d13f4e66d8 307 Gene3D G3DSA:1.10.8.10 2 53 4.9E-28 T 23-04-2016 CLI_RS14070 531a5af79346453261813d8da3dd3a64 145 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.2E-7 T 23-04-2016 IPR020476 NUDIX hydrolase CLI_RS14070 531a5af79346453261813d8da3dd3a64 145 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.2E-7 T 23-04-2016 IPR020476 NUDIX hydrolase CLI_RS14070 531a5af79346453261813d8da3dd3a64 145 Pfam PF00293 NUDIX domain 9 133 4.8E-26 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CLI_RS14070 531a5af79346453261813d8da3dd3a64 145 PANTHER PTHR22769:SF24 1 145 5.9E-61 T 23-04-2016 CLI_RS14070 531a5af79346453261813d8da3dd3a64 145 Gene3D G3DSA:3.90.79.10 6 138 1.7E-33 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLI_RS14070 531a5af79346453261813d8da3dd3a64 145 SUPERFAMILY SSF55811 8 138 1.9E-34 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLI_RS14070 531a5af79346453261813d8da3dd3a64 145 PANTHER PTHR22769 1 145 5.9E-61 T 23-04-2016 CLI_RS14070 531a5af79346453261813d8da3dd3a64 145 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CLI_RS01055 773198ff25b55e40c1c9b4758e010727 86 Pfam PF01312 FlhB HrpN YscU SpaS Family 2 78 8.0E-19 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLI_RS01055 773198ff25b55e40c1c9b4758e010727 86 PANTHER PTHR30531 1 86 2.5E-63 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLI_RS01055 773198ff25b55e40c1c9b4758e010727 86 Gene3D G3DSA:3.40.1690.10 5 82 2.1E-22 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CLI_RS01055 773198ff25b55e40c1c9b4758e010727 86 SUPERFAMILY SSF160544 2 82 1.44E-21 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CLI_RS01055 773198ff25b55e40c1c9b4758e010727 86 PANTHER PTHR30531:SF5 1 86 2.5E-63 T 23-04-2016 CLI_RS02175 6067982cdc935082a5e0379d282ca4de 231 PANTHER PTHR30399 2 231 7.5E-55 T 23-04-2016 CLI_RS02175 6067982cdc935082a5e0379d282ca4de 231 Pfam PF01863 Protein of unknown function DUF45 21 225 4.2E-58 T 23-04-2016 IPR002725 Protein of unknown function DUF45 CLI_RS18255 77de965a5ffab599563f78720711d99a 228 Pfam PF00072 Response regulator receiver domain 8 117 5.5E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS18255 77de965a5ffab599563f78720711d99a 228 SMART SM00862 151 225 2.5E-29 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS18255 77de965a5ffab599563f78720711d99a 228 PANTHER PTHR26402:SF609 6 227 4.2E-135 T 23-04-2016 CLI_RS18255 77de965a5ffab599563f78720711d99a 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 3.2E-28 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS18255 77de965a5ffab599563f78720711d99a 228 Gene3D G3DSA:1.10.10.10 130 227 3.0E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18255 77de965a5ffab599563f78720711d99a 228 SUPERFAMILY SSF52172 7 182 4.39E-45 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS18255 77de965a5ffab599563f78720711d99a 228 PANTHER PTHR26402 6 227 4.2E-135 T 23-04-2016 CLI_RS18255 77de965a5ffab599563f78720711d99a 228 Gene3D G3DSA:3.40.50.2300 7 129 4.5E-43 T 23-04-2016 CLI_RS18255 77de965a5ffab599563f78720711d99a 228 SMART SM00448 6 116 1.3E-45 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS08820 816e45218f3e887081480ac0f298c155 123 Pfam PF07736 Chorismate mutase type I 1 119 1.5E-38 T 23-04-2016 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CLI_RS08820 816e45218f3e887081480ac0f298c155 123 PANTHER PTHR21164 1 123 4.4E-50 T 23-04-2016 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CLI_RS08820 816e45218f3e887081480ac0f298c155 123 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 7 119 1.0E-22 T 23-04-2016 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CLI_RS08820 816e45218f3e887081480ac0f298c155 123 PIRSF PIRSF005965 1 123 5.1E-40 T 23-04-2016 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CLI_RS08820 816e45218f3e887081480ac0f298c155 123 PANTHER PTHR21164:SF0 1 123 4.4E-50 T 23-04-2016 CLI_RS08820 816e45218f3e887081480ac0f298c155 123 SUPERFAMILY SSF55298 2 120 1.18E-35 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLI_RS08820 816e45218f3e887081480ac0f298c155 123 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 2 119 5.1E-33 T 23-04-2016 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CLI_RS08820 816e45218f3e887081480ac0f298c155 123 Gene3D G3DSA:3.30.1330.40 1 121 4.1E-40 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLI_RS02225 3b79a4083b889a6f0d84eadfe3999ab8 149 PANTHER PTHR10642 4 146 4.2E-53 T 23-04-2016 CLI_RS02225 3b79a4083b889a6f0d84eadfe3999ab8 149 SUPERFAMILY SSF53098 1 145 4.93E-53 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS02225 3b79a4083b889a6f0d84eadfe3999ab8 149 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 25.248 T 23-04-2016 IPR022892 Ribonuclease H GO:0004523 CLI_RS02225 3b79a4083b889a6f0d84eadfe3999ab8 149 Pfam PF00075 RNase H 2 144 8.2E-45 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CLI_RS02225 3b79a4083b889a6f0d84eadfe3999ab8 149 Gene3D G3DSA:3.30.420.10 2 146 2.2E-56 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS07955 70692d704b23513cd07ff8a51d16a8e6 247 PANTHER PTHR30294 48 245 2.4E-31 T 23-04-2016 CLI_RS07955 70692d704b23513cd07ff8a51d16a8e6 247 PIRSF PIRSF006648 5 245 3.4E-21 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CLI_RS07955 70692d704b23513cd07ff8a51d16a8e6 247 PANTHER PTHR30294:SF23 48 245 2.4E-31 T 23-04-2016 CLI_RS07955 70692d704b23513cd07ff8a51d16a8e6 247 Pfam PF01061 ABC-2 type transporter 7 211 3.4E-23 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 CLI_RS11815 c8ae844936cf877ae8d98599b64d0963 483 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 31 461 3.0E-88 T 23-04-2016 IPR021145 Portal protein, SPP1 Gp6-like CLI_RS11815 c8ae844936cf877ae8d98599b64d0963 483 TIGRFAM TIGR01538 portal_SPP1: phage portal protein, SPP1 family 20 457 3.3E-59 T 23-04-2016 IPR006428 Portal protein, SPP1-type CLI_RS06670 e761bf8a08d0fe215169da0e0fa9ffd4 157 SUPERFAMILY SSF47741 88 153 1.07E-26 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLI_RS06670 e761bf8a08d0fe215169da0e0fa9ffd4 157 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 56 9.6E-7 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLI_RS06670 e761bf8a08d0fe215169da0e0fa9ffd4 157 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CLI_RS06670 e761bf8a08d0fe215169da0e0fa9ffd4 157 Gene3D G3DSA:3.10.20.30 4 78 3.6E-28 T 23-04-2016 IPR012675 Beta-grasp domain CLI_RS06670 e761bf8a08d0fe215169da0e0fa9ffd4 157 PANTHER PTHR11908 3 142 2.9E-36 T 23-04-2016 CLI_RS06670 e761bf8a08d0fe215169da0e0fa9ffd4 157 Pfam PF01799 [2Fe-2S] binding domain 77 149 2.7E-27 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLI_RS06670 e761bf8a08d0fe215169da0e0fa9ffd4 157 Gene3D G3DSA:1.10.150.120 79 153 7.2E-32 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLI_RS06670 e761bf8a08d0fe215169da0e0fa9ffd4 157 SUPERFAMILY SSF54292 5 82 1.31E-22 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLI_RS13920 4581c9a04af5f273a7d4ab26578b0e07 290 Pfam PF01680 SOR/SNZ family 6 210 1.4E-108 T 23-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 CLI_RS13920 4581c9a04af5f273a7d4ab26578b0e07 290 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 7 288 3.3E-149 T 23-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 CLI_RS13920 4581c9a04af5f273a7d4ab26578b0e07 290 PANTHER PTHR31829 5 290 9.5E-215 T 23-04-2016 CLI_RS13920 4581c9a04af5f273a7d4ab26578b0e07 290 Gene3D G3DSA:3.20.20.70 22 158 5.7E-52 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS13920 4581c9a04af5f273a7d4ab26578b0e07 290 Gene3D G3DSA:3.20.20.70 190 276 5.7E-52 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS13920 4581c9a04af5f273a7d4ab26578b0e07 290 PIRSF PIRSF029271 1 290 1.5E-148 T 23-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 CLI_RS13920 4581c9a04af5f273a7d4ab26578b0e07 290 SUPERFAMILY SSF51366 17 266 8.95E-67 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLI_RS13920 4581c9a04af5f273a7d4ab26578b0e07 290 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 2 290 51.282 T 23-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 CLI_RS13920 4581c9a04af5f273a7d4ab26578b0e07 290 ProSitePatterns PS01235 PdxS/SNZ family signature. 203 221 - T 23-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 CLI_RS14740 4b161f968b23d1a695011b9639f05e80 380 SUPERFAMILY SSF102114 7 379 8.24E-113 T 23-04-2016 CLI_RS14740 4b161f968b23d1a695011b9639f05e80 380 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 11 363 8.9E-105 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- CLI_RS14740 4b161f968b23d1a695011b9639f05e80 380 PANTHER PTHR13932 1 379 7.4E-157 T 23-04-2016 CLI_RS14740 4b161f968b23d1a695011b9639f05e80 380 Pfam PF06969 HemN C-terminal domain 305 367 1.6E-12 T 23-04-2016 IPR010723 HemN, C-terminal CLI_RS14740 4b161f968b23d1a695011b9639f05e80 380 SMART SM00729 9 225 1.4E-57 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS14740 4b161f968b23d1a695011b9639f05e80 380 PANTHER PTHR13932:SF5 1 379 7.4E-157 T 23-04-2016 CLI_RS14740 4b161f968b23d1a695011b9639f05e80 380 Gene3D G3DSA:3.80.30.20 9 241 3.3E-44 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS14740 4b161f968b23d1a695011b9639f05e80 380 Pfam PF04055 Radical SAM superfamily 14 178 1.0E-24 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS03725 6cc78c144f3b2621e44a803fe76e81f3 85 PANTHER PTHR37812 1 85 5.8E-15 T 23-04-2016 CLI_RS03725 6cc78c144f3b2621e44a803fe76e81f3 85 SUPERFAMILY SSF46689 1 85 6.09E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03725 6cc78c144f3b2621e44a803fe76e81f3 85 PANTHER PTHR37812:SF1 1 85 5.8E-15 T 23-04-2016 CLI_RS18670 ddfe2b01ed7e8c866a823a2ad4cc0a59 124 SUPERFAMILY SSF51735 6 121 2.66E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS18670 ddfe2b01ed7e8c866a823a2ad4cc0a59 124 PANTHER PTHR33303 6 124 8.5E-28 T 23-04-2016 CLI_RS18670 ddfe2b01ed7e8c866a823a2ad4cc0a59 124 Gene3D G3DSA:3.40.50.720 8 123 1.2E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS18670 ddfe2b01ed7e8c866a823a2ad4cc0a59 124 SMART SM00881 6 95 0.0024 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CLI_RS18670 ddfe2b01ed7e8c866a823a2ad4cc0a59 124 Pfam PF13380 CoA binding domain 10 120 5.1E-22 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 PANTHER PTHR32071 21 422 4.9E-153 T 23-04-2016 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 Pfam PF00158 Sigma-54 interaction domain 83 247 6.3E-45 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 SUPERFAMILY SSF63520 806 904 3.92E-16 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 Gene3D G3DSA:1.10.1790.10 809 903 7.7E-15 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 Gene3D G3DSA:1.10.1790.10 444 541 8.5E-24 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 Gene3D G3DSA:3.40.50.300 78 248 1.0E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 Pfam PF00874 PRD domain 817 904 6.2E-16 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 Pfam PF00874 PRD domain 454 540 8.5E-19 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 178 193 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 SMART SM00382 105 259 6.4E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 SUPERFAMILY SSF52540 76 318 4.72E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 SUPERFAMILY SSF46785 16 62 7.24E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 SUPERFAMILY SSF63520 444 544 2.88E-22 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 Pfam PF03610 PTS system fructose IIA component 554 653 1.3E-13 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 SUPERFAMILY SSF53062 553 677 6.8E-21 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 Gene3D G3DSA:3.40.50.510 551 682 1.4E-49 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 Gene3D G3DSA:1.10.10.10 7 70 3.7E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17195 cb73d39526dddab1ab72cc3a8955468a 909 PANTHER PTHR32071:SF41 21 422 4.9E-153 T 23-04-2016 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 Gene3D G3DSA:3.40.50.1370 144 290 2.4E-53 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 144 2.9E-43 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 Gene3D G3DSA:3.40.50.1370 5 143 3.5E-52 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 224 233 8.4E-37 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 8.4E-37 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 263 268 8.4E-37 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 38 60 8.4E-37 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 131 148 8.4E-37 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 77 86 8.4E-37 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 4.8E-24 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 4.8E-24 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 4.8E-24 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 259 268 4.8E-24 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 SUPERFAMILY SSF53671 2 305 7.59E-101 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 4 306 35.793 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 5 304 4.1E-104 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 301 2.4E-30 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 PANTHER PTHR11405:SF16 2 307 1.3E-146 T 23-04-2016 CLI_RS16495 9a339dc3750610aa587eb4a74ac686fa 307 PANTHER PTHR11405 2 307 1.3E-146 T 23-04-2016 CLI_RS08170 2dbbe8f2601d9254ff4571b7061b76ad 198 PANTHER PTHR40056:SF1 1 198 8.1E-50 T 23-04-2016 CLI_RS08170 2dbbe8f2601d9254ff4571b7061b76ad 198 Pfam PF08876 Domain of unknown function (DUF1836) 22 129 6.2E-31 T 23-04-2016 IPR014975 Protein of unknown function DUF1836 CLI_RS08170 2dbbe8f2601d9254ff4571b7061b76ad 198 PANTHER PTHR40056 1 198 8.1E-50 T 23-04-2016 CLI_RS15690 b84c66f848470e7d1490f9afa0813693 296 PANTHER PTHR30111:SF1 1 296 1.8E-93 T 23-04-2016 CLI_RS15690 b84c66f848470e7d1490f9afa0813693 296 SUPERFAMILY SSF64397 2 242 4.05E-73 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CLI_RS15690 b84c66f848470e7d1490f9afa0813693 296 PIRSF PIRSF005261 1 292 2.9E-84 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CLI_RS15690 b84c66f848470e7d1490f9afa0813693 296 SUPERFAMILY SSF118352 234 291 1.28E-17 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CLI_RS15690 b84c66f848470e7d1490f9afa0813693 296 Gene3D G3DSA:3.55.30.10 2 235 2.5E-77 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CLI_RS15690 b84c66f848470e7d1490f9afa0813693 296 Pfam PF01430 Hsp33 protein 3 281 1.5E-84 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CLI_RS15690 b84c66f848470e7d1490f9afa0813693 296 Gene3D G3DSA:3.90.1280.10 236 291 2.8E-21 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CLI_RS15690 b84c66f848470e7d1490f9afa0813693 296 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 292 38.532 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CLI_RS15690 b84c66f848470e7d1490f9afa0813693 296 PANTHER PTHR30111 1 296 1.8E-93 T 23-04-2016 CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 PANTHER PTHR11014:SF16 2 186 2.6E-72 T 23-04-2016 CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 SUPERFAMILY SSF55031 182 376 9.57E-52 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 Gene3D G3DSA:3.30.70.360 280 375 1.1E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 Pfam PF01546 Peptidase family M20/M25/M40 81 459 7.8E-36 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 SUPERFAMILY SSF53187 380 462 2.0E-66 T 23-04-2016 CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 SUPERFAMILY SSF53187 3 182 2.0E-66 T 23-04-2016 CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 11 458 2.9E-165 T 23-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 Pfam PF07687 Peptidase dimerisation domain 257 365 1.4E-5 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 Gene3D G3DSA:3.30.70.360 202 279 1.5E-24 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 112 151 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 Gene3D G3DSA:3.40.630.10 379 463 1.5E-69 T 23-04-2016 CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 Gene3D G3DSA:3.40.630.10 3 182 1.5E-69 T 23-04-2016 CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 PANTHER PTHR11014 2 186 2.6E-72 T 23-04-2016 CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 PANTHER PTHR11014 255 463 2.6E-72 T 23-04-2016 CLI_RS17105 6ab04eb72b14642d93401b2b71fbb01f 463 PANTHER PTHR11014:SF16 255 463 2.6E-72 T 23-04-2016 CLI_RS05970 a5ed5c7aaa077671b76f84347ca101e8 367 PANTHER PTHR21716:SF14 16 361 7.1E-156 T 23-04-2016 CLI_RS05970 a5ed5c7aaa077671b76f84347ca101e8 367 Pfam PF01594 Domain of unknown function DUF20 29 358 4.5E-66 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CLI_RS05970 a5ed5c7aaa077671b76f84347ca101e8 367 PANTHER PTHR21716 16 361 7.1E-156 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CLI_RS13630 0cb4aad8143c0a2b13d57f70b6168412 93 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 89 4.5E-11 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CLI_RS13630 0cb4aad8143c0a2b13d57f70b6168412 93 SUPERFAMILY SSF101498 1 88 5.23E-14 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CLI_RS13630 0cb4aad8143c0a2b13d57f70b6168412 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 32 87 3.0E-12 T 23-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CLI_RS18830 df0c13eb9e92f82e18cba66d29a4f79d 208 Pfam PF14804 Jag N-terminus 7 54 2.6E-21 T 23-04-2016 IPR032782 Jag, N-terminal CLI_RS18830 df0c13eb9e92f82e18cba66d29a4f79d 208 SMART SM01245 5 57 1.3E-25 T 23-04-2016 IPR032782 Jag, N-terminal CLI_RS18830 df0c13eb9e92f82e18cba66d29a4f79d 208 Gene3D G3DSA:3.30.1370.50 138 207 6.9E-31 T 23-04-2016 IPR001374 R3H domain GO:0003676 CLI_RS18830 df0c13eb9e92f82e18cba66d29a4f79d 208 Pfam PF13083 KH domain 62 131 1.3E-20 T 23-04-2016 CLI_RS18830 df0c13eb9e92f82e18cba66d29a4f79d 208 Gene3D G3DSA:3.30.300.120 59 137 8.3E-27 T 23-04-2016 CLI_RS18830 df0c13eb9e92f82e18cba66d29a4f79d 208 Gene3D G3DSA:3.30.30.80 1 57 1.7E-24 T 23-04-2016 IPR032782 Jag, N-terminal CLI_RS18830 df0c13eb9e92f82e18cba66d29a4f79d 208 SUPERFAMILY SSF82708 148 203 5.62E-9 T 23-04-2016 IPR001374 R3H domain GO:0003676 CLI_RS18830 df0c13eb9e92f82e18cba66d29a4f79d 208 SMART SM00393 127 206 5.4E-19 T 23-04-2016 IPR001374 R3H domain GO:0003676 CLI_RS18830 df0c13eb9e92f82e18cba66d29a4f79d 208 Pfam PF01424 R3H domain 145 204 1.6E-17 T 23-04-2016 IPR001374 R3H domain GO:0003676 CLI_RS18830 df0c13eb9e92f82e18cba66d29a4f79d 208 PANTHER PTHR35800 2 208 2.1E-71 T 23-04-2016 CLI_RS16535 5e97b5390a323b6f053b8379f302ba12 213 Gene3D G3DSA:1.10.3720.10 32 210 8.4E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS16535 5e97b5390a323b6f053b8379f302ba12 213 SUPERFAMILY SSF161098 72 210 1.83E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS16535 5e97b5390a323b6f053b8379f302ba12 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 209 1.6E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS16535 5e97b5390a323b6f053b8379f302ba12 213 PANTHER PTHR30151:SF8 10 213 1.3E-52 T 23-04-2016 CLI_RS16535 5e97b5390a323b6f053b8379f302ba12 213 PANTHER PTHR30151 10 213 1.3E-52 T 23-04-2016 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 SMART SM00388 259 326 1.0E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 Pfam PF00672 HAMP domain 186 247 2.6E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 325 8.6E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 440 6.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 6.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 6.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 Gene3D G3DSA:3.30.565.10 310 483 4.9E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 SUPERFAMILY SSF158472 200 249 1.19E-8 T 23-04-2016 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 Gene3D G3DSA:1.10.287.130 253 309 9.4E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 PANTHER PTHR24423 137 159 3.7E-70 T 23-04-2016 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 PANTHER PTHR24423 231 483 3.7E-70 T 23-04-2016 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 484 1.1E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 SUPERFAMILY SSF55874 316 483 4.19E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 SMART SM00304 199 251 5.4E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 SUPERFAMILY SSF47384 245 327 3.73E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS09740 ce954846f4d188160ffca89164e2be00 486 SMART SM00387 375 486 5.7E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 SUPERFAMILY SSF52540 178 439 1.28E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 PANTHER PTHR15184:SF7 2 93 5.0E-267 T 23-04-2016 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 PANTHER PTHR15184:SF7 131 136 5.0E-267 T 23-04-2016 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 PANTHER PTHR15184 181 582 5.0E-267 T 23-04-2016 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 PANTHER PTHR15184 131 136 5.0E-267 T 23-04-2016 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 1 585 52.837 T 23-04-2016 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 84 202 2.8E-46 T 23-04-2016 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 SUPERFAMILY SSF50615 2 71 1.57E-13 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 PANTHER PTHR15184 2 93 5.0E-267 T 23-04-2016 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 211 434 5.8E-94 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 SUPERFAMILY SSF47917 446 536 1.78E-24 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 Gene3D G3DSA:3.40.50.300 161 434 1.9E-103 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 PANTHER PTHR15184:SF7 181 582 5.0E-267 T 23-04-2016 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 Gene3D G3DSA:1.10.1140.10 443 530 1.4E-25 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 425 434 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13140 84e3b90fc331dd94a1aa30e13d050fcf 590 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 68 2.1E-14 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS15415 97e198329a98a56673abb0d227194a4c 474 PANTHER PTHR30250:SF8 1 474 1.1E-156 T 23-04-2016 CLI_RS15415 97e198329a98a56673abb0d227194a4c 474 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 353 429 1.2E-9 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLI_RS15415 97e198329a98a56673abb0d227194a4c 474 PANTHER PTHR30250 1 474 1.1E-156 T 23-04-2016 CLI_RS15415 97e198329a98a56673abb0d227194a4c 474 Pfam PF01943 Polysaccharide biosynthesis protein 15 274 4.5E-17 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLI_RS02575 426f61c2e6c86838df7e2a5a2de178b4 297 Pfam PF00293 NUDIX domain 8 116 3.9E-13 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CLI_RS02575 426f61c2e6c86838df7e2a5a2de178b4 297 PRINTS PR00502 NUDIX hydrolase family signature 33 47 7.9E-8 T 23-04-2016 IPR020476 NUDIX hydrolase CLI_RS02575 426f61c2e6c86838df7e2a5a2de178b4 297 PRINTS PR00502 NUDIX hydrolase family signature 47 62 7.9E-8 T 23-04-2016 IPR020476 NUDIX hydrolase CLI_RS02575 426f61c2e6c86838df7e2a5a2de178b4 297 PANTHER PTHR22769 1 193 3.4E-17 T 23-04-2016 CLI_RS02575 426f61c2e6c86838df7e2a5a2de178b4 297 Gene3D G3DSA:3.90.79.10 6 142 2.0E-36 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLI_RS02575 426f61c2e6c86838df7e2a5a2de178b4 297 PANTHER PTHR22769:SF14 1 193 3.4E-17 T 23-04-2016 CLI_RS02575 426f61c2e6c86838df7e2a5a2de178b4 297 SUPERFAMILY SSF55811 5 105 5.96E-20 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLI_RS02575 426f61c2e6c86838df7e2a5a2de178b4 297 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CLI_RS14205 eb6112cdc93e09c93ea5fcd80fe9814d 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 189 2.3E-20 T 23-04-2016 IPR023214 HAD-like domain CLI_RS14205 eb6112cdc93e09c93ea5fcd80fe9814d 223 Gene3D G3DSA:3.40.50.1000 75 222 8.2E-34 T 23-04-2016 IPR023214 HAD-like domain CLI_RS14205 eb6112cdc93e09c93ea5fcd80fe9814d 223 PANTHER PTHR18901:SF10 1 222 5.4E-102 T 23-04-2016 CLI_RS14205 eb6112cdc93e09c93ea5fcd80fe9814d 223 PANTHER PTHR18901 1 222 5.4E-102 T 23-04-2016 CLI_RS14205 eb6112cdc93e09c93ea5fcd80fe9814d 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 132 190 1.1E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS14205 eb6112cdc93e09c93ea5fcd80fe9814d 223 Gene3D G3DSA:1.10.150.240 24 74 7.8E-7 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 CLI_RS14205 eb6112cdc93e09c93ea5fcd80fe9814d 223 SUPERFAMILY SSF56784 1 222 1.36E-40 T 23-04-2016 IPR023214 HAD-like domain CLI_RS12475 9d4c1919125fb982b6c3f4b99b7756cb 185 PANTHER PTHR18895 1 185 6.3E-40 T 23-04-2016 CLI_RS12475 9d4c1919125fb982b6c3f4b99b7756cb 185 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 7.5E-48 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS12475 9d4c1919125fb982b6c3f4b99b7756cb 185 PANTHER PTHR18895:SF60 1 185 6.3E-40 T 23-04-2016 CLI_RS12475 9d4c1919125fb982b6c3f4b99b7756cb 185 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLI_RS12475 9d4c1919125fb982b6c3f4b99b7756cb 185 Gene3D G3DSA:3.40.50.150 1 183 9.8E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS12475 9d4c1919125fb982b6c3f4b99b7756cb 185 PIRSF PIRSF004553 1 184 3.7E-58 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS12475 9d4c1919125fb982b6c3f4b99b7756cb 185 Pfam PF03602 Conserved hypothetical protein 95 1 181 7.2E-60 T 23-04-2016 CLI_RS12475 9d4c1919125fb982b6c3f4b99b7756cb 185 SUPERFAMILY SSF53335 1 181 1.36E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS01695 3f4274b4898bcc6e44d2d0eabd199ef0 224 PANTHER PTHR26402:SF581 3 223 2.7E-151 T 23-04-2016 CLI_RS01695 3f4274b4898bcc6e44d2d0eabd199ef0 224 Pfam PF00072 Response regulator receiver domain 5 111 3.1E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01695 3f4274b4898bcc6e44d2d0eabd199ef0 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 221 4.7E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS01695 3f4274b4898bcc6e44d2d0eabd199ef0 224 SUPERFAMILY SSF46894 131 222 1.36E-24 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS01695 3f4274b4898bcc6e44d2d0eabd199ef0 224 SMART SM00448 3 113 1.2E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01695 3f4274b4898bcc6e44d2d0eabd199ef0 224 SUPERFAMILY SSF52172 2 126 1.42E-33 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS01695 3f4274b4898bcc6e44d2d0eabd199ef0 224 SMART SM00862 150 221 5.9E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS01695 3f4274b4898bcc6e44d2d0eabd199ef0 224 Gene3D G3DSA:1.10.10.10 132 223 1.5E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01695 3f4274b4898bcc6e44d2d0eabd199ef0 224 PANTHER PTHR26402 3 223 2.7E-151 T 23-04-2016 CLI_RS01695 3f4274b4898bcc6e44d2d0eabd199ef0 224 Gene3D G3DSA:3.40.50.2300 2 120 8.2E-38 T 23-04-2016 CLI_RS16150 923bdedd657fc4391d8ee6378fd7ef7a 115 Pfam PF13424 Tetratricopeptide repeat 3 61 3.0E-9 T 23-04-2016 CLI_RS16150 923bdedd657fc4391d8ee6378fd7ef7a 115 PANTHER PTHR23083 3 103 5.8E-15 T 23-04-2016 CLI_RS16150 923bdedd657fc4391d8ee6378fd7ef7a 115 SUPERFAMILY SSF48452 3 108 2.55E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS16150 923bdedd657fc4391d8ee6378fd7ef7a 115 Gene3D G3DSA:1.25.40.10 2 106 1.0E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS16150 923bdedd657fc4391d8ee6378fd7ef7a 115 SMART SM00028 1 33 0.078 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS16150 923bdedd657fc4391d8ee6378fd7ef7a 115 SMART SM00028 34 67 0.1 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS16150 923bdedd657fc4391d8ee6378fd7ef7a 115 SMART SM00028 68 100 15.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS08260 76635ecab71f07cd7e1c6939f87cf02e 595 PANTHER PTHR34551:SF1 412 595 3.7E-121 T 23-04-2016 CLI_RS08260 76635ecab71f07cd7e1c6939f87cf02e 595 PANTHER PTHR34551:SF1 257 319 3.7E-121 T 23-04-2016 CLI_RS08260 76635ecab71f07cd7e1c6939f87cf02e 595 PANTHER PTHR34551:SF1 1 241 3.7E-121 T 23-04-2016 CLI_RS08260 76635ecab71f07cd7e1c6939f87cf02e 595 PANTHER PTHR34551:SF1 336 356 3.7E-121 T 23-04-2016 CLI_RS08260 76635ecab71f07cd7e1c6939f87cf02e 595 PANTHER PTHR34551 412 595 3.7E-121 T 23-04-2016 CLI_RS08260 76635ecab71f07cd7e1c6939f87cf02e 595 PANTHER PTHR34551 257 319 3.7E-121 T 23-04-2016 CLI_RS08260 76635ecab71f07cd7e1c6939f87cf02e 595 PANTHER PTHR34551 1 241 3.7E-121 T 23-04-2016 CLI_RS08260 76635ecab71f07cd7e1c6939f87cf02e 595 PANTHER PTHR34551 336 356 3.7E-121 T 23-04-2016 CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 1.2E-27 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 5.9E-26 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 PIRSF PIRSF005901 1 185 9.4E-69 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 Gene3D G3DSA:2.40.50.140 65 127 1.8E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 2.0E-21 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 SUPERFAMILY SSF50104 1 62 3.79E-20 T 23-04-2016 IPR008991 Translation protein SH3-like domain CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 SUPERFAMILY SSF50249 65 129 7.71E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 1.2E-77 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 Gene3D G3DSA:2.30.30.30 1 63 8.0E-28 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 SMART SM01185 67 121 3.6E-25 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 SUPERFAMILY SSF50249 128 185 2.57E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 51.683 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 23-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 SMART SM00841 129 184 4.2E-34 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 Gene3D G3DSA:2.40.50.140 128 185 2.8E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS09595 4a5e26ffa85a208d6286843dd5f2530d 185 PANTHER PTHR30053 1 185 1.6E-85 T 23-04-2016 CLI_RS11990 34564a2f2800f806a6447764791585f6 352 SUPERFAMILY SSF52540 7 271 9.0E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11990 34564a2f2800f806a6447764791585f6 352 SUPERFAMILY SSF54752 272 329 6.54E-20 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal CLI_RS11990 34564a2f2800f806a6447764791585f6 352 Gene3D G3DSA:3.40.50.300 38 271 4.3E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11990 34564a2f2800f806a6447764791585f6 352 SMART SM00382 61 232 2.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS11990 34564a2f2800f806a6447764791585f6 352 ProSitePatterns PS00321 recA signature. 217 225 - T 23-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CLI_RS11990 34564a2f2800f806a6447764791585f6 352 PANTHER PTHR22942 9 339 3.8E-201 T 23-04-2016 CLI_RS11990 34564a2f2800f806a6447764791585f6 352 PRINTS PR00142 RecA protein signature 301 318 2.2E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLI_RS11990 34564a2f2800f806a6447764791585f6 352 PRINTS PR00142 RecA protein signature 131 160 2.2E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLI_RS11990 34564a2f2800f806a6447764791585f6 352 PRINTS PR00142 RecA protein signature 214 242 2.2E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLI_RS11990 34564a2f2800f806a6447764791585f6 352 PRINTS PR00142 RecA protein signature 97 126 2.2E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLI_RS11990 34564a2f2800f806a6447764791585f6 352 PRINTS PR00142 RecA protein signature 247 276 2.2E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLI_RS11990 34564a2f2800f806a6447764791585f6 352 PRINTS PR00142 RecA protein signature 169 198 2.2E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLI_RS11990 34564a2f2800f806a6447764791585f6 352 Gene3D G3DSA:3.30.250.10 272 330 5.4E-26 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal CLI_RS11990 34564a2f2800f806a6447764791585f6 352 Pfam PF00154 recA bacterial DNA recombination protein 11 272 1.9E-144 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLI_RS11990 34564a2f2800f806a6447764791585f6 352 Hamap MF_00268 Protein RecA [recA]. 9 333 51.92 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLI_RS11990 34564a2f2800f806a6447764791585f6 352 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 8 327 5.2E-173 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLI_RS11990 34564a2f2800f806a6447764791585f6 352 PANTHER PTHR22942:SF1 9 339 3.8E-201 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 SUPERFAMILY SSF51011 476 552 1.98E-16 T 23-04-2016 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 PRINTS PR00110 Alpha-amylase signature 316 328 2.0E-6 T 23-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 PRINTS PR00110 Alpha-amylase signature 193 204 2.0E-6 T 23-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 PRINTS PR00110 Alpha-amylase signature 92 103 2.0E-6 T 23-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 Gene3D G3DSA:3.20.20.80 2 104 1.3E-120 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 Gene3D G3DSA:3.20.20.80 175 475 1.3E-120 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 PANTHER PTHR10357 408 420 5.8E-215 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 PANTHER PTHR10357 1 392 5.8E-215 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 PANTHER PTHR10357 452 553 5.8E-215 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 SMART SM00642 13 415 4.8E-159 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 Gene3D G3DSA:3.90.400.10 105 174 4.6E-33 T 23-04-2016 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 PANTHER PTHR10357:SF142 408 420 5.8E-215 T 23-04-2016 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 PANTHER PTHR10357:SF142 1 392 5.8E-215 T 23-04-2016 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 PANTHER PTHR10357:SF142 452 553 5.8E-215 T 23-04-2016 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 SUPERFAMILY SSF51445 4 473 3.16E-150 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS08235 252996e533c15800773f48be29fa8da0 554 Pfam PF00128 Alpha amylase, catalytic domain 28 373 3.4E-117 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLI_RS08235 252996e533c15800773f48be29fa8da0 554 Gene3D G3DSA:2.60.40.1180 477 553 2.6E-20 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta CLI_RS08235 252996e533c15800773f48be29fa8da0 554 Pfam PF16657 Maltogenic Amylase, C-terminal domain 476 546 1.4E-6 T 23-04-2016 IPR032091 Maltogenic Amylase, C-terminal CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 Gene3D G3DSA:3.90.400.10 103 171 2.8E-27 T 23-04-2016 CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 4 551 1.0E-269 T 23-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 PANTHER PTHR10357 1 417 0.0 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 PANTHER PTHR10357 449 555 0.0 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 Pfam PF00128 Alpha amylase, catalytic domain 26 369 3.3E-117 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 SUPERFAMILY SSF51445 4 468 3.88E-147 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 SUPERFAMILY SSF51011 473 552 2.16E-19 T 23-04-2016 CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 SMART SM00642 11 412 1.2E-140 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 Gene3D G3DSA:3.20.20.80 2 102 4.8E-120 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 Gene3D G3DSA:3.20.20.80 172 470 4.8E-120 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 Pfam PF16657 Maltogenic Amylase, C-terminal domain 473 546 3.5E-8 T 23-04-2016 IPR032091 Maltogenic Amylase, C-terminal CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 PANTHER PTHR10357:SF170 1 417 0.0 T 23-04-2016 CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 PANTHER PTHR10357:SF170 449 555 0.0 T 23-04-2016 CLI_RS10060 834981a1c5e97b65eace5bdbb77b759c 555 Gene3D G3DSA:2.60.40.1180 474 552 1.7E-23 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta CLI_RS07125 3c69d2b3425fdcc0fc4580b43b6c42b3 182 Pfam PF00990 Diguanylate cyclase, GGDEF domain 29 180 1.0E-34 T 23-04-2016 IPR000160 GGDEF domain CLI_RS07125 3c69d2b3425fdcc0fc4580b43b6c42b3 182 PANTHER PTHR10799:SF660 50 179 1.5E-15 T 23-04-2016 CLI_RS07125 3c69d2b3425fdcc0fc4580b43b6c42b3 182 Gene3D G3DSA:3.30.70.270 31 180 2.8E-36 T 23-04-2016 CLI_RS07125 3c69d2b3425fdcc0fc4580b43b6c42b3 182 SUPERFAMILY SSF55073 34 179 1.57E-34 T 23-04-2016 IPR029787 Nucleotide cyclase CLI_RS07125 3c69d2b3425fdcc0fc4580b43b6c42b3 182 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 28 179 2.0E-37 T 23-04-2016 IPR000160 GGDEF domain CLI_RS07125 3c69d2b3425fdcc0fc4580b43b6c42b3 182 SMART SM00267 18 182 2.5E-22 T 23-04-2016 IPR000160 GGDEF domain CLI_RS07125 3c69d2b3425fdcc0fc4580b43b6c42b3 182 PANTHER PTHR10799 50 179 1.5E-15 T 23-04-2016 CLI_RS07650 3245ca6922fb77aa3e5cf53ef95dddd4 223 PANTHER PTHR24220 22 221 4.4E-115 T 23-04-2016 CLI_RS07650 3245ca6922fb77aa3e5cf53ef95dddd4 223 PANTHER PTHR24220:SF444 22 221 4.4E-115 T 23-04-2016 CLI_RS07650 3245ca6922fb77aa3e5cf53ef95dddd4 223 SUPERFAMILY SSF52540 5 220 2.18E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07650 3245ca6922fb77aa3e5cf53ef95dddd4 223 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07650 3245ca6922fb77aa3e5cf53ef95dddd4 223 Pfam PF00005 ABC transporter 23 159 9.1E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS07650 3245ca6922fb77aa3e5cf53ef95dddd4 223 SMART SM00382 22 209 2.0E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS07650 3245ca6922fb77aa3e5cf53ef95dddd4 223 Gene3D G3DSA:3.40.50.300 23 221 2.2E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18860 1396dc2392bb79b05eafb9651f122ac2 66 PANTHER PTHR30050:SF2 1 66 1.5E-28 T 23-04-2016 CLI_RS18860 1396dc2392bb79b05eafb9651f122ac2 66 PANTHER PTHR30050 1 66 1.5E-28 T 23-04-2016 CLI_RS18860 1396dc2392bb79b05eafb9651f122ac2 66 Pfam PF00308 Bacterial dnaA protein 19 66 2.1E-21 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA CLI_RS18860 1396dc2392bb79b05eafb9651f122ac2 66 SUPERFAMILY SSF52540 19 66 1.59E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18860 1396dc2392bb79b05eafb9651f122ac2 66 Gene3D G3DSA:3.40.50.300 10 66 2.5E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01560 b7ffcec4667aa492ad3c27ed75854df5 507 PANTHER PTHR30009 8 506 0.0 T 23-04-2016 CLI_RS01560 b7ffcec4667aa492ad3c27ed75854df5 507 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 413 491 1.6E-14 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS01560 b7ffcec4667aa492ad3c27ed75854df5 507 Pfam PF00367 phosphotransferase system, EIIB 434 466 6.3E-12 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS01560 b7ffcec4667aa492ad3c27ed75854df5 507 PANTHER PTHR30009:SF11 8 506 0.0 T 23-04-2016 CLI_RS01560 b7ffcec4667aa492ad3c27ed75854df5 507 Gene3D G3DSA:3.30.1360.60 429 506 8.8E-25 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS01560 b7ffcec4667aa492ad3c27ed75854df5 507 SUPERFAMILY SSF55604 431 505 4.18E-19 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS01560 b7ffcec4667aa492ad3c27ed75854df5 507 Pfam PF02378 Phosphotransferase system, EIIC 16 346 1.6E-61 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 PANTHER PTHR21060 1 394 6.0E-235 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 Gene3D G3DSA:3.30.420.40 205 394 1.4E-81 T 23-04-2016 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 200.491 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 SUPERFAMILY SSF53067 1 195 3.56E-74 T 23-04-2016 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 PANTHER PTHR21060:SF11 1 394 6.0E-235 T 23-04-2016 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 TIGRFAM TIGR00016 ackA: acetate kinase 1 394 2.2E-166 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 SUPERFAMILY SSF53067 157 394 5.61E-94 T 23-04-2016 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 PRINTS PR00471 Acetate kinase family signature 322 338 5.4E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 PRINTS PR00471 Acetate kinase family signature 173 186 5.4E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 PRINTS PR00471 Acetate kinase family signature 300 313 5.4E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 PRINTS PR00471 Acetate kinase family signature 376 388 5.4E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 PRINTS PR00471 Acetate kinase family signature 3 14 5.4E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 PRINTS PR00471 Acetate kinase family signature 203 224 5.4E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 Gene3D G3DSA:3.30.420.40 1 204 7.6E-12 T 23-04-2016 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 Pfam PF00871 Acetokinase family 2 389 1.3E-168 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 PIRSF PIRSF000722 1 397 2.1E-164 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS12275 e9f4ad65ad4c2c86e764970d21bc27c0 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS03000 836342b3d6b1624bcf55e4006f1de0d3 227 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 55 212 2.4E-45 T 23-04-2016 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 CLI_RS03000 836342b3d6b1624bcf55e4006f1de0d3 227 PANTHER PTHR41316 49 227 2.1E-73 T 23-04-2016 CLI_RS03000 836342b3d6b1624bcf55e4006f1de0d3 227 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 57 210 3.1E-46 T 23-04-2016 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 309 320 3.9E-30 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 3.9E-30 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 3.9E-30 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 3.9E-30 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 3.9E-30 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 Gene3D G3DSA:3.40.50.1370 2 144 6.1E-57 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 2.4E-23 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 295 318 2.4E-23 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 2.4E-23 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 2.4E-23 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 328 2.2E-57 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 331 81.947 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.5E-46 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 Gene3D G3DSA:3.40.50.1370 145 317 1.3E-71 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PANTHER PTHR11405 1 275 3.5E-204 T 23-04-2016 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PANTHER PTHR11405 295 332 3.5E-204 T 23-04-2016 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 330 4.7E-128 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PANTHER PTHR11405:SF44 1 275 3.5E-204 T 23-04-2016 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 PANTHER PTHR11405:SF44 295 332 3.5E-204 T 23-04-2016 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS12975 95feb5570ad5aecd729504a05aa323e4 333 SUPERFAMILY SSF53671 1 332 1.31E-102 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS04195 6312dea783de5983c0edd925de226b67 420 SMART SM00387 309 419 2.3E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04195 6312dea783de5983c0edd925de226b67 420 SUPERFAMILY SSF55874 254 415 1.57E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04195 6312dea783de5983c0edd925de226b67 420 Pfam PF00512 His Kinase A (phospho-acceptor) domain 201 264 7.6E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04195 6312dea783de5983c0edd925de226b67 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 4.8E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS04195 6312dea783de5983c0edd925de226b67 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 374 4.8E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS04195 6312dea783de5983c0edd925de226b67 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 4.8E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS04195 6312dea783de5983c0edd925de226b67 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 360 4.8E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS04195 6312dea783de5983c0edd925de226b67 420 SMART SM00388 198 264 5.0E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04195 6312dea783de5983c0edd925de226b67 420 Gene3D G3DSA:1.10.287.130 200 250 1.3E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04195 6312dea783de5983c0edd925de226b67 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 417 6.5E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04195 6312dea783de5983c0edd925de226b67 420 PANTHER PTHR24423 132 415 6.1E-55 T 23-04-2016 CLI_RS04195 6312dea783de5983c0edd925de226b67 420 PANTHER PTHR24423 1 11 6.1E-55 T 23-04-2016 CLI_RS04195 6312dea783de5983c0edd925de226b67 420 Gene3D G3DSA:3.30.565.10 251 415 2.8E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04195 6312dea783de5983c0edd925de226b67 420 SUPERFAMILY SSF47384 186 264 5.1E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS13260 af34c9f699de4ca96af40576db6c3a83 89 PANTHER PTHR34040 1 89 2.8E-40 T 23-04-2016 CLI_RS13260 af34c9f699de4ca96af40576db6c3a83 89 PIRSF PIRSF004669 1 89 3.9E-32 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLI_RS13260 af34c9f699de4ca96af40576db6c3a83 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 1.2E-29 T 23-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CLI_RS13260 af34c9f699de4ca96af40576db6c3a83 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.2E-29 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLI_RS13260 af34c9f699de4ca96af40576db6c3a83 89 PANTHER PTHR34040:SF2 1 89 2.8E-40 T 23-04-2016 CLI_RS13260 af34c9f699de4ca96af40576db6c3a83 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.0E-23 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLI_RS13260 af34c9f699de4ca96af40576db6c3a83 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.0E-23 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLI_RS13260 af34c9f699de4ca96af40576db6c3a83 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.0E-23 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 1.1E-15 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 SMART SM00863 169 218 6.9E-25 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 SUPERFAMILY SSF52954 527 632 1.03E-34 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 Gene3D G3DSA:3.40.50.800 529 633 2.2E-38 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 505 518 2.8E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 2.8E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 462 490 2.8E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 2.8E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 532 544 2.8E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 Pfam PF03129 Anticodon binding domain 539 628 2.7E-24 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 Gene3D G3DSA:3.30.980.10 187 222 3.9E-38 T 23-04-2016 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 Gene3D G3DSA:3.30.980.10 67 129 3.9E-38 T 23-04-2016 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 SUPERFAMILY SSF55681 242 524 4.79E-101 T 23-04-2016 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 Gene3D G3DSA:3.10.20.30 1 64 4.0E-21 T 23-04-2016 IPR012675 Beta-grasp domain CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 PANTHER PTHR11451:SF31 1 633 0.0 T 23-04-2016 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 PANTHER PTHR11451 1 633 0.0 T 23-04-2016 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 323 527 3.9E-39 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 632 35.025 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 Gene3D G3DSA:3.30.54.20 130 186 1.7E-25 T 23-04-2016 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 SUPERFAMILY SSF81271 2 62 1.24E-14 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 SUPERFAMILY SSF55186 65 240 4.19E-64 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 Pfam PF02824 TGS domain 2 61 1.2E-10 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 629 2.5E-230 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLI_RS15640 d2630dccf5de2d6cd28fdb7aee69a1fc 635 Gene3D G3DSA:3.30.930.10 241 528 1.5E-122 T 23-04-2016 CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 SUPERFAMILY SSF52540 1 413 3.93E-141 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 Gene3D G3DSA:3.40.50.300 5 88 5.8E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 Gene3D G3DSA:3.40.50.300 277 337 5.8E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 Gene3D G3DSA:3.40.50.300 387 405 5.8E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 SUPERFAMILY SSF52540 36 81 1.56E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 SUPERFAMILY SSF52540 457 579 1.56E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 SMART SM00490 458 544 1.2E-20 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 657 43.367 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 Gene3D G3DSA:4.10.860.10 619 656 9.9E-14 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 Pfam PF00271 Helicase conserved C-terminal domain 431 543 3.5E-19 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 Gene3D G3DSA:3.30.2060.10 159 237 1.7E-13 T 23-04-2016 CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 Pfam PF04851 Type III restriction enzyme, res subunit 10 138 3.7E-13 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 PANTHER PTHR24029 1 657 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 Pfam PF12344 Ultra-violet resistance protein B 550 592 1.2E-22 T 23-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 SMART SM00487 8 424 1.8E-27 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 Gene3D G3DSA:3.40.50.300 417 580 1.7E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 655 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 SUPERFAMILY SSF46600 610 656 1.19E-11 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS17375 5a320ad24a6968ae5849357dd0878257 662 Pfam PF02151 UvrB/uvrC motif 622 656 2.2E-8 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 SUPERFAMILY SSF55874 188 353 4.45E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 PANTHER PTHR24423 65 357 1.6E-157 T 23-04-2016 CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 Pfam PF00512 His Kinase A (phospho-acceptor) domain 132 197 5.6E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 SMART SM00387 244 355 1.6E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 245 352 6.9E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 PANTHER PTHR24423 24 35 1.6E-157 T 23-04-2016 CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 SUPERFAMILY SSF47384 121 198 1.35E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 309 4.8E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 4.8E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 352 4.8E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 PANTHER PTHR24423:SF526 24 35 1.6E-157 T 23-04-2016 CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 PANTHER PTHR24423:SF526 65 357 1.6E-157 T 23-04-2016 CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 Gene3D G3DSA:1.10.287.130 126 194 1.2E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 Gene3D G3DSA:3.30.565.10 200 354 2.2E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03285 723491759f9c2e9e381484ec0af7b957 360 SMART SM00388 131 198 9.2E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS10290 8e116192f75ef22bdd9aa065f0bb6087 825 Gene3D G3DSA:4.10.1080.10 477 567 1.1E-7 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 CLI_RS10290 8e116192f75ef22bdd9aa065f0bb6087 825 Gene3D G3DSA:4.10.1080.10 234 305 2.6E-4 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 CLI_RS10290 8e116192f75ef22bdd9aa065f0bb6087 825 Gene3D G3DSA:4.10.1080.10 119 224 1.2E-12 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 CLI_RS10290 8e116192f75ef22bdd9aa065f0bb6087 825 Pfam PF11187 Protein of unknown function (DUF2974) 633 769 1.2E-6 T 23-04-2016 IPR024499 Protein of unknown function DUF2974 CLI_RS10290 8e116192f75ef22bdd9aa065f0bb6087 825 SUPERFAMILY SSF53474 573 775 2.34E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS10290 8e116192f75ef22bdd9aa065f0bb6087 825 Gene3D G3DSA:3.40.50.1820 574 790 7.1E-10 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS10290 8e116192f75ef22bdd9aa065f0bb6087 825 Gene3D G3DSA:2.60.40.10 50 118 1.3E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold CLI_RS10290 8e116192f75ef22bdd9aa065f0bb6087 825 SUPERFAMILY SSF103647 484 565 6.67E-6 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 CLI_RS13870 026fbbee3e76b5bd82a6e9d54bf93016 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 1.7E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS13870 026fbbee3e76b5bd82a6e9d54bf93016 126 PANTHER PTHR38445 1 126 1.2E-27 T 23-04-2016 CLI_RS13870 026fbbee3e76b5bd82a6e9d54bf93016 126 PANTHER PTHR38445:SF2 1 126 1.2E-27 T 23-04-2016 CLI_RS13870 026fbbee3e76b5bd82a6e9d54bf93016 126 SMART SM00345 16 75 1.6E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS13870 026fbbee3e76b5bd82a6e9d54bf93016 126 SUPERFAMILY SSF46785 5 79 1.19E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS13870 026fbbee3e76b5bd82a6e9d54bf93016 126 Gene3D G3DSA:1.10.10.10 1 76 9.7E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07145 d7838afe6bda5e5a0a0ac32eade7d0e2 157 Gene3D G3DSA:1.10.10.10 7 82 5.1E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07145 d7838afe6bda5e5a0a0ac32eade7d0e2 157 Pfam PF01475 Ferric uptake regulator family 14 130 9.1E-24 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CLI_RS07145 d7838afe6bda5e5a0a0ac32eade7d0e2 157 SUPERFAMILY SSF46785 8 141 1.38E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07145 d7838afe6bda5e5a0a0ac32eade7d0e2 157 PANTHER PTHR33202 1 154 1.5E-42 T 23-04-2016 CLI_RS07145 d7838afe6bda5e5a0a0ac32eade7d0e2 157 PANTHER PTHR33202:SF7 1 154 1.5E-42 T 23-04-2016 CLI_RS04735 8812b6a1173cd499032742e4951611b4 195 PANTHER PTHR34822 2 191 6.5E-51 T 23-04-2016 CLI_RS04735 8812b6a1173cd499032742e4951611b4 195 SUPERFAMILY SSF81301 21 187 5.89E-44 T 23-04-2016 CLI_RS04735 8812b6a1173cd499032742e4951611b4 195 Gene3D G3DSA:3.30.460.10 14 187 9.9E-51 T 23-04-2016 CLI_RS04735 8812b6a1173cd499032742e4951611b4 195 Pfam PF04229 GrpB protein 18 180 7.9E-43 T 23-04-2016 IPR007344 GrpB/Dephospho-CoA kinase CLI_RS12100 82ee5c43bad5b8c4f2e007972116b7cd 385 Gene3D G3DSA:3.40.50.720 2 150 1.0E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS12100 82ee5c43bad5b8c4f2e007972116b7cd 385 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 382 47.174 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS12100 82ee5c43bad5b8c4f2e007972116b7cd 385 Pfam PF13288 DXP reductoisomerase C-terminal domain 261 377 4.4E-42 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS12100 82ee5c43bad5b8c4f2e007972116b7cd 385 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 379 1.4E-152 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS12100 82ee5c43bad5b8c4f2e007972116b7cd 385 PIRSF PIRSF006205 1 384 1.4E-160 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS12100 82ee5c43bad5b8c4f2e007972116b7cd 385 SUPERFAMILY SSF55347 126 264 2.94E-61 T 23-04-2016 CLI_RS12100 82ee5c43bad5b8c4f2e007972116b7cd 385 Gene3D G3DSA:1.10.1740.10 303 381 1.0E-25 T 23-04-2016 CLI_RS12100 82ee5c43bad5b8c4f2e007972116b7cd 385 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 229 3.3E-40 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS12100 82ee5c43bad5b8c4f2e007972116b7cd 385 SUPERFAMILY SSF69055 291 381 3.4E-28 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS12100 82ee5c43bad5b8c4f2e007972116b7cd 385 PANTHER PTHR30525 2 378 4.3E-222 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS12100 82ee5c43bad5b8c4f2e007972116b7cd 385 SUPERFAMILY SSF51735 2 150 5.0E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS12100 82ee5c43bad5b8c4f2e007972116b7cd 385 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.4E-41 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS02365 9fe819da889c077149103d4413643d6a 281 PANTHER PTHR21299 1 276 2.4E-138 T 23-04-2016 CLI_RS02365 9fe819da889c077149103d4413643d6a 281 Pfam PF02569 Pantoate-beta-alanine ligase 3 277 1.1E-105 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CLI_RS02365 9fe819da889c077149103d4413643d6a 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 278 3.9E-107 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CLI_RS02365 9fe819da889c077149103d4413643d6a 281 Gene3D G3DSA:3.30.1300.10 178 280 5.9E-32 T 23-04-2016 CLI_RS02365 9fe819da889c077149103d4413643d6a 281 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 79 3.8E-10 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLI_RS02365 9fe819da889c077149103d4413643d6a 281 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 39.93 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CLI_RS02365 9fe819da889c077149103d4413643d6a 281 PANTHER PTHR21299:SF1 1 276 2.4E-138 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CLI_RS02365 9fe819da889c077149103d4413643d6a 281 SUPERFAMILY SSF52374 1 279 6.66E-106 T 23-04-2016 CLI_RS02365 9fe819da889c077149103d4413643d6a 281 Gene3D G3DSA:3.40.50.620 1 174 1.8E-75 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00825 afd63a7de712da19ae4b94b481937b6a 305 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 54 301 3.0E-88 T 23-04-2016 IPR010787 Protein of unknown function DUF1385 CLI_RS00825 afd63a7de712da19ae4b94b481937b6a 305 PANTHER PTHR31223:SF5 145 253 2.9E-40 T 23-04-2016 CLI_RS00825 afd63a7de712da19ae4b94b481937b6a 305 Pfam PF07136 Protein of unknown function (DUF1385) 54 297 3.7E-92 T 23-04-2016 IPR010787 Protein of unknown function DUF1385 CLI_RS00825 afd63a7de712da19ae4b94b481937b6a 305 PANTHER PTHR31223 145 253 2.9E-40 T 23-04-2016 CLI_RS16840 3903cb872dda3ba796552708a884bc49 264 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 8 255 1.4E-63 T 23-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS16840 3903cb872dda3ba796552708a884bc49 264 SUPERFAMILY SSF53067 5 258 2.98E-39 T 23-04-2016 CLI_RS16840 3903cb872dda3ba796552708a884bc49 264 PANTHER PTHR32329 1 264 1.5E-140 T 23-04-2016 CLI_RS16840 3903cb872dda3ba796552708a884bc49 264 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 5 253 3.4E-80 T 23-04-2016 IPR008275 CoA enzyme activase CLI_RS16840 3903cb872dda3ba796552708a884bc49 264 Gene3D G3DSA:3.30.420.40 98 237 6.5E-51 T 23-04-2016 CLI_RS14600 6b2660a5fef16c6b0410a47db8dc7389 267 Gene3D G3DSA:3.40.1390.30 116 225 2.5E-35 T 23-04-2016 CLI_RS14600 6b2660a5fef16c6b0410a47db8dc7389 267 SUPERFAMILY SSF102705 5 266 4.19E-90 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLI_RS14600 6b2660a5fef16c6b0410a47db8dc7389 267 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 244 1.6E-63 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLI_RS14600 6b2660a5fef16c6b0410a47db8dc7389 267 Gene3D G3DSA:3.40.1390.30 4 115 5.8E-45 T 23-04-2016 CLI_RS14600 6b2660a5fef16c6b0410a47db8dc7389 267 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 246 1.6E-81 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLI_RS14600 6b2660a5fef16c6b0410a47db8dc7389 267 PANTHER PTHR13799 5 267 1.4E-88 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 Gene3D G3DSA:3.30.1360.60 1 79 6.5E-26 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 Gene3D G3DSA:2.70.70.10 473 622 4.8E-57 T 23-04-2016 CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 SUPERFAMILY SSF55604 9 79 2.48E-20 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 Pfam PF00367 phosphotransferase system, EIIB 9 40 6.5E-14 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 478 602 3.8E-49 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 SUPERFAMILY SSF51261 472 621 7.15E-53 T 23-04-2016 IPR011055 Duplicated hybrid motif CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 PANTHER PTHR30175 1 573 6.6E-203 T 23-04-2016 CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 478 598 2.5E-42 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 622 4.1E-218 T 23-04-2016 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 Pfam PF02378 Phosphotransferase system, EIIC 110 390 5.5E-35 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 PANTHER PTHR30175:SF9 1 573 6.6E-203 T 23-04-2016 CLI_RS14185 0bf34efaaa9c92fae276c0f5efc81567 623 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 540 552 - T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS02945 e6da80008c30952c0fbbc09df2b79899 149 SUPERFAMILY SSF55729 11 142 5.48E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS02945 e6da80008c30952c0fbbc09df2b79899 149 PANTHER PTHR23091 10 137 6.8E-16 T 23-04-2016 CLI_RS02945 e6da80008c30952c0fbbc09df2b79899 149 Gene3D G3DSA:3.40.630.30 9 146 7.9E-28 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS02945 e6da80008c30952c0fbbc09df2b79899 149 Pfam PF13508 Acetyltransferase (GNAT) domain 49 129 1.6E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS02945 e6da80008c30952c0fbbc09df2b79899 149 PANTHER PTHR23091:SF122 10 137 6.8E-16 T 23-04-2016 CLI_RS02945 e6da80008c30952c0fbbc09df2b79899 149 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 28 112 0.004 T 23-04-2016 CLI_RS17285 13b7c03ce520b273c4fb3f1a1081321a 461 PANTHER PTHR11061 6 459 4.5E-184 T 23-04-2016 CLI_RS17285 13b7c03ce520b273c4fb3f1a1081321a 461 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 279 459 2.4E-22 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CLI_RS17285 13b7c03ce520b273c4fb3f1a1081321a 461 Gene3D G3DSA:2.40.50.140 1 83 8.6E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17285 13b7c03ce520b273c4fb3f1a1081321a 461 Gene3D G3DSA:3.40.50.150 252 458 4.7E-71 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS17285 13b7c03ce520b273c4fb3f1a1081321a 461 Pfam PF01938 TRAM domain 8 62 1.8E-6 T 23-04-2016 IPR002792 TRAM domain CLI_RS17285 13b7c03ce520b273c4fb3f1a1081321a 461 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 441 451 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site CLI_RS17285 13b7c03ce520b273c4fb3f1a1081321a 461 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 389 420 - T 23-04-2016 IPR030390 RNA methyltransferase TrmA, active site CLI_RS17285 13b7c03ce520b273c4fb3f1a1081321a 461 SUPERFAMILY SSF50249 2 63 1.43E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17285 13b7c03ce520b273c4fb3f1a1081321a 461 PANTHER PTHR11061:SF30 6 459 4.5E-184 T 23-04-2016 CLI_RS17285 13b7c03ce520b273c4fb3f1a1081321a 461 SUPERFAMILY SSF53335 72 458 5.91E-89 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS17285 13b7c03ce520b273c4fb3f1a1081321a 461 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 22 451 3.5E-159 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CLI_RS16390 4b9f7838fc27002b37fe63658dfa1a69 411 SUPERFAMILY SSF53850 22 408 1.53E-35 T 23-04-2016 CLI_RS16390 4b9f7838fc27002b37fe63658dfa1a69 411 Gene3D G3DSA:3.40.190.10 41 160 4.3E-15 T 23-04-2016 CLI_RS16390 4b9f7838fc27002b37fe63658dfa1a69 411 PANTHER PTHR30061:SF27 1 411 2.6E-164 T 23-04-2016 CLI_RS16390 4b9f7838fc27002b37fe63658dfa1a69 411 PANTHER PTHR30061 1 411 2.6E-164 T 23-04-2016 CLI_RS16390 4b9f7838fc27002b37fe63658dfa1a69 411 Gene3D G3DSA:3.40.190.10 161 334 2.2E-16 T 23-04-2016 CLI_RS16390 4b9f7838fc27002b37fe63658dfa1a69 411 Gene3D G3DSA:3.40.190.10 385 406 2.2E-16 T 23-04-2016 CLI_RS16390 4b9f7838fc27002b37fe63658dfa1a69 411 Pfam PF01547 Bacterial extracellular solute-binding protein 49 330 1.5E-17 T 23-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 CLI_RS17715 608809e732b4bd5a9ebf3fc55cc4543b 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.611 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17715 608809e732b4bd5a9ebf3fc55cc4543b 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17715 608809e732b4bd5a9ebf3fc55cc4543b 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.8E-24 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17715 608809e732b4bd5a9ebf3fc55cc4543b 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 2.0E-8 T 23-04-2016 CLI_RS17715 608809e732b4bd5a9ebf3fc55cc4543b 37 Pfam PF00444 Ribosomal protein L36 1 37 3.1E-19 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17715 608809e732b4bd5a9ebf3fc55cc4543b 37 PANTHER PTHR18804 1 37 2.1E-18 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17715 608809e732b4bd5a9ebf3fc55cc4543b 37 SUPERFAMILY SSF57840 1 37 6.28E-17 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS00170 9a5f5339773a97cb053b87f93733faac 145 SUPERFAMILY SSF53927 3 143 2.84E-44 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CLI_RS00170 9a5f5339773a97cb053b87f93733faac 145 Gene3D G3DSA:3.40.140.10 3 143 6.2E-48 T 23-04-2016 CLI_RS00170 9a5f5339773a97cb053b87f93733faac 145 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 5 145 45.367 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 CLI_RS00170 9a5f5339773a97cb053b87f93733faac 145 PANTHER PTHR11079 4 145 2.7E-40 T 23-04-2016 CLI_RS00170 9a5f5339773a97cb053b87f93733faac 145 Pfam PF14437 MafB19-like deaminase 4 145 1.2E-34 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 CLI_RS00170 9a5f5339773a97cb053b87f93733faac 145 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 87 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLI_RS00170 9a5f5339773a97cb053b87f93733faac 145 PANTHER PTHR11079:SF72 4 145 2.7E-40 T 23-04-2016 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 Pfam PF03129 Anticodon binding domain 293 384 7.0E-21 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 14 478 1.4E-183 T 23-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 SMART SM00946 411 478 5.5E-34 T 23-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 411 478 2.6E-25 T 23-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 SUPERFAMILY SSF52954 282 403 7.1E-32 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 SUPERFAMILY SSF55681 16 279 2.24E-76 T 23-04-2016 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 PANTHER PTHR11451:SF6 7 452 7.0E-241 T 23-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 PANTHER PTHR11451 7 452 7.0E-241 T 23-04-2016 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 Gene3D G3DSA:3.30.110.30 405 477 8.3E-32 T 23-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 SUPERFAMILY SSF64586 406 478 1.84E-23 T 23-04-2016 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 PRINTS PR01046 Prolyl-tRNA synthetase signature 140 148 2.3E-9 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 PRINTS PR01046 Prolyl-tRNA synthetase signature 110 121 2.3E-9 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 PRINTS PR01046 Prolyl-tRNA synthetase signature 69 87 2.3E-9 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 PRINTS PR01046 Prolyl-tRNA synthetase signature 149 160 2.3E-9 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 Hamap MF_01571 Proline--tRNA ligase [proS]. 11 478 44.048 T 23-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 104 274 1.9E-19 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 Gene3D G3DSA:3.30.930.10 8 286 8.8E-114 T 23-04-2016 CLI_RS17110 73a9fd1d47e78e52148e8521f691e89f 478 Gene3D G3DSA:3.40.50.800 287 402 1.3E-40 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS11070 afe249f37b1714cc074c0d183cce0ec2 461 Pfam PF12229 Putative peptidoglycan binding domain 80 192 2.0E-15 T 23-04-2016 IPR022029 Putative peptidoglycan binding domain CLI_RS11070 afe249f37b1714cc074c0d183cce0ec2 461 Pfam PF12229 Putative peptidoglycan binding domain 205 320 2.6E-25 T 23-04-2016 IPR022029 Putative peptidoglycan binding domain CLI_RS11070 afe249f37b1714cc074c0d183cce0ec2 461 Gene3D G3DSA:2.40.440.10 340 458 5.5E-18 T 23-04-2016 CLI_RS11070 afe249f37b1714cc074c0d183cce0ec2 461 PANTHER PTHR30582 90 460 5.3E-111 T 23-04-2016 CLI_RS11070 afe249f37b1714cc074c0d183cce0ec2 461 SUPERFAMILY SSF141523 338 459 1.03E-32 T 23-04-2016 CLI_RS11070 afe249f37b1714cc074c0d183cce0ec2 461 SUPERFAMILY SSF143985 214 332 1.31E-39 T 23-04-2016 CLI_RS11070 afe249f37b1714cc074c0d183cce0ec2 461 Pfam PF03734 L,D-transpeptidase catalytic domain 341 458 3.4E-19 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 CLI_RS11070 afe249f37b1714cc074c0d183cce0ec2 461 PANTHER PTHR30582:SF2 90 460 5.3E-111 T 23-04-2016 CLI_RS00200 0959f919de4683eb74a75c7fa7dbf144 86 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 12 85 4.1E-24 T 23-04-2016 IPR010001 SigmaK-factor processing regulatory BofA CLI_RS00200 0959f919de4683eb74a75c7fa7dbf144 86 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 4 86 3.3E-28 T 23-04-2016 IPR010001 SigmaK-factor processing regulatory BofA CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 Pfam PF00704 Glycosyl hydrolases family 18 253 486 3.9E-26 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 SMART SM00287 99 161 4.2E-7 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 SMART SM00257 54 97 2.6E-14 T 23-04-2016 IPR018392 LysM domain CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 SMART SM00257 8 51 1.0E-17 T 23-04-2016 IPR018392 LysM domain CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 Gene3D G3DSA:3.20.20.80 193 498 1.2E-35 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 Pfam PF01476 LysM domain 9 51 3.7E-15 T 23-04-2016 IPR018392 LysM domain CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 Pfam PF01476 LysM domain 55 97 6.6E-12 T 23-04-2016 IPR018392 LysM domain CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 PANTHER PTHR11177:SF6 253 491 4.5E-57 T 23-04-2016 CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 Pfam PF08239 Bacterial SH3 domain 109 155 1.3E-9 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 SUPERFAMILY SSF54106 7 52 5.36E-12 T 23-04-2016 IPR018392 LysM domain CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 PANTHER PTHR11177 253 491 4.5E-57 T 23-04-2016 CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 Gene3D G3DSA:3.10.350.10 7 52 1.3E-17 T 23-04-2016 IPR018392 LysM domain CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 SUPERFAMILY SSF51445 459 494 2.67E-43 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 SUPERFAMILY SSF51445 193 403 2.67E-43 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 Gene3D G3DSA:3.10.350.10 54 97 3.0E-15 T 23-04-2016 IPR018392 LysM domain CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 SMART SM00636 170 487 8.1E-8 T 23-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 SUPERFAMILY SSF54106 54 97 4.71E-11 T 23-04-2016 IPR018392 LysM domain CLI_RS06285 1475ef4321103004c0efbdf7aa409376 504 ProSitePatterns PS01095 Chitinases family 18 active site. 288 296 - T 23-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 CLI_RS09760 467af96c38bc40cd61110ac6e87de46a 247 Pfam PF00005 ABC transporter 21 165 9.2E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS09760 467af96c38bc40cd61110ac6e87de46a 247 SUPERFAMILY SSF52540 2 228 8.54E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09760 467af96c38bc40cd61110ac6e87de46a 247 PANTHER PTHR24220 6 226 2.7E-100 T 23-04-2016 CLI_RS09760 467af96c38bc40cd61110ac6e87de46a 247 PANTHER PTHR24220:SF523 6 226 2.7E-100 T 23-04-2016 CLI_RS09760 467af96c38bc40cd61110ac6e87de46a 247 Gene3D G3DSA:3.40.50.300 2 228 5.9E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09760 467af96c38bc40cd61110ac6e87de46a 247 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS09760 467af96c38bc40cd61110ac6e87de46a 247 SMART SM00382 29 214 9.2E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03590 a28f405574060d617ff347102deb7f6b 312 Gene3D G3DSA:3.20.20.70 2 237 2.3E-44 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS03590 a28f405574060d617ff347102deb7f6b 312 PANTHER PTHR11082:SF32 1 312 3.0E-198 T 23-04-2016 CLI_RS03590 a28f405574060d617ff347102deb7f6b 312 PIRSF PIRSF006621 1 312 3.2E-59 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLI_RS03590 a28f405574060d617ff347102deb7f6b 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 88 106 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLI_RS03590 a28f405574060d617ff347102deb7f6b 312 SUPERFAMILY SSF51395 1 292 2.32E-42 T 23-04-2016 CLI_RS03590 a28f405574060d617ff347102deb7f6b 312 PANTHER PTHR11082 1 312 3.0E-198 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLI_RS03590 a28f405574060d617ff347102deb7f6b 312 Pfam PF01207 Dihydrouridine synthase (Dus) 5 299 4.5E-33 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLI_RS17445 db928c807671b1eb59798235c31d63d8 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 124 26.615 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLI_RS17445 db928c807671b1eb59798235c31d63d8 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 120 2.4E-21 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLI_RS17445 db928c807671b1eb59798235c31d63d8 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 123 1.3E-37 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLI_RS17445 db928c807671b1eb59798235c31d63d8 126 Gene3D G3DSA:3.90.470.20 2 123 2.2E-39 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLI_RS17445 db928c807671b1eb59798235c31d63d8 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 123 1.0E-32 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLI_RS17445 db928c807671b1eb59798235c31d63d8 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 87 2.0E-23 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLI_RS17445 db928c807671b1eb59798235c31d63d8 126 SUPERFAMILY SSF56214 2 123 8.76E-32 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLI_RS05705 cb28f5f63cd9b2e95da62289f94fba25 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 374 1.4E-108 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 CLI_RS05705 cb28f5f63cd9b2e95da62289f94fba25 388 PANTHER PTHR11014 10 387 1.0E-161 T 23-04-2016 CLI_RS05705 cb28f5f63cd9b2e95da62289f94fba25 388 PANTHER PTHR11014:SF63 10 387 1.0E-161 T 23-04-2016 CLI_RS05705 cb28f5f63cd9b2e95da62289f94fba25 388 Pfam PF07687 Peptidase dimerisation domain 185 277 1.6E-7 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS05705 cb28f5f63cd9b2e95da62289f94fba25 388 Gene3D G3DSA:3.40.630.10 3 177 4.5E-94 T 23-04-2016 CLI_RS05705 cb28f5f63cd9b2e95da62289f94fba25 388 Gene3D G3DSA:3.40.630.10 297 387 4.5E-94 T 23-04-2016 CLI_RS05705 cb28f5f63cd9b2e95da62289f94fba25 388 Gene3D G3DSA:3.30.70.360 181 296 9.3E-37 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS05705 cb28f5f63cd9b2e95da62289f94fba25 388 SUPERFAMILY SSF53187 2 196 1.08E-80 T 23-04-2016 CLI_RS05705 cb28f5f63cd9b2e95da62289f94fba25 388 SUPERFAMILY SSF53187 297 387 1.08E-80 T 23-04-2016 CLI_RS05705 cb28f5f63cd9b2e95da62289f94fba25 388 PIRSF PIRSF005962 1 388 1.2E-128 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 CLI_RS05705 cb28f5f63cd9b2e95da62289f94fba25 388 SUPERFAMILY SSF55031 183 289 1.03E-26 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS05705 cb28f5f63cd9b2e95da62289f94fba25 388 Pfam PF01546 Peptidase family M20/M25/M40 72 382 1.6E-29 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLI_RS10545 1014dea0d40bac326db5d5cf3f253a77 87 PANTHER PTHR36539:SF1 1 85 4.2E-34 T 23-04-2016 CLI_RS10545 1014dea0d40bac326db5d5cf3f253a77 87 Gene3D G3DSA:2.40.50.220 1 82 5.4E-27 T 23-04-2016 IPR023414 Ethanolamine utilization protein-like domain CLI_RS10545 1014dea0d40bac326db5d5cf3f253a77 87 SUPERFAMILY SSF159133 1 82 2.49E-25 T 23-04-2016 IPR023414 Ethanolamine utilization protein-like domain CLI_RS10545 1014dea0d40bac326db5d5cf3f253a77 87 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 81 2.4E-26 T 23-04-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLI_RS10545 1014dea0d40bac326db5d5cf3f253a77 87 PANTHER PTHR36539 1 85 4.2E-34 T 23-04-2016 CLI_RS10545 1014dea0d40bac326db5d5cf3f253a77 87 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 12 81 4.0E-21 T 23-04-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLI_RS05145 faa793504315fab1a05c39547de9aed4 147 SUPERFAMILY SSF55729 8 145 4.8E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05145 faa793504315fab1a05c39547de9aed4 147 PANTHER PTHR23091 3 132 1.7E-13 T 23-04-2016 CLI_RS05145 faa793504315fab1a05c39547de9aed4 147 Gene3D G3DSA:3.40.630.30 12 139 3.9E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05145 faa793504315fab1a05c39547de9aed4 147 PANTHER PTHR23091:SF130 3 132 1.7E-13 T 23-04-2016 CLI_RS05145 faa793504315fab1a05c39547de9aed4 147 Pfam PF13508 Acetyltransferase (GNAT) domain 47 113 6.0E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 516 2.4E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 613 4.7E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 671 4.7E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 652 4.7E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 627 4.7E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 Gene3D G3DSA:3.30.450.20 186 302 1.4E-6 T 23-04-2016 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 PANTHER PTHR24423 7 85 1.9E-80 T 23-04-2016 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 PANTHER PTHR24423 111 157 1.9E-80 T 23-04-2016 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 PANTHER PTHR24423 180 301 1.9E-80 T 23-04-2016 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 PANTHER PTHR24423 438 670 1.9E-80 T 23-04-2016 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 SUPERFAMILY SSF55785 186 295 4.57E-5 T 23-04-2016 IPR000014 PAS domain CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 Gene3D G3DSA:1.10.287.130 441 501 9.5E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 Pfam PF13188 PAS domain 315 379 0.027 T 23-04-2016 IPR000014 PAS domain CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 Pfam PF13188 PAS domain 183 214 0.17 T 23-04-2016 IPR000014 PAS domain CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 SMART SM00388 448 516 6.4E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 Gene3D G3DSA:3.30.565.10 502 673 2.8E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 SMART SM00387 562 674 3.3E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 SUPERFAMILY SSF47384 438 516 1.96E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 SUPERFAMILY SSF55874 505 670 5.76E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13735 0257217f272aac4c4f8744de0e18e77f 702 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 563 671 2.5E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS18355 149a63f4897ffe2130aa10e5b5250e65 257 SUPERFAMILY SSF53681 111 255 1.59E-22 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18355 149a63f4897ffe2130aa10e5b5250e65 257 PANTHER PTHR21198 1 256 4.0E-138 T 23-04-2016 CLI_RS18355 149a63f4897ffe2130aa10e5b5250e65 257 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 206 1.1E-25 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18355 149a63f4897ffe2130aa10e5b5250e65 257 Hamap MF_00258 Glutamate racemase [murI]. 6 257 32.888 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18355 149a63f4897ffe2130aa10e5b5250e65 257 TIGRFAM TIGR00067 glut_race: glutamate racemase 8 242 8.1E-67 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18355 149a63f4897ffe2130aa10e5b5250e65 257 Gene3D G3DSA:3.40.50.1860 5 172 4.1E-49 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18355 149a63f4897ffe2130aa10e5b5250e65 257 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 72 80 - T 23-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18355 149a63f4897ffe2130aa10e5b5250e65 257 SUPERFAMILY SSF53681 7 108 3.6E-35 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18355 149a63f4897ffe2130aa10e5b5250e65 257 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 181 191 - T 23-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18355 149a63f4897ffe2130aa10e5b5250e65 257 PANTHER PTHR21198:SF3 1 256 4.0E-138 T 23-04-2016 CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 PANTHER PTHR30531 1 609 0.0 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 263 608 4.4E-129 T 23-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 9 246 2.1E-50 T 23-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 SUPERFAMILY SSF160544 500 606 3.14E-39 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 Gene3D G3DSA:3.40.1690.10 473 608 7.3E-58 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 Pfam PF01312 FlhB HrpN YscU SpaS Family 263 602 9.9E-130 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 Pfam PF01311 Bacterial export proteins, family 1 8 240 6.2E-57 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 PANTHER PTHR30531:SF0 1 609 0.0 T 23-04-2016 CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 288 1.9E-38 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 464 482 1.9E-38 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 557 578 1.9E-38 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 484 501 1.9E-38 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLI_RS13255 bf96ed3136e110cf041bcbabfd785f79 609 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 528 543 1.9E-38 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLI_RS01335 2307f0299100e605df2f579dddbd2a53 156 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 1.9E-58 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CLI_RS01335 2307f0299100e605df2f579dddbd2a53 156 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 23-04-2016 IPR020081 SsrA-binding protein, conserved site CLI_RS01335 2307f0299100e605df2f579dddbd2a53 156 PANTHER PTHR30308:SF2 1 156 1.8E-84 T 23-04-2016 CLI_RS01335 2307f0299100e605df2f579dddbd2a53 156 Gene3D G3DSA:2.40.280.10 9 128 1.1E-54 T 23-04-2016 IPR023620 Small protein B CLI_RS01335 2307f0299100e605df2f579dddbd2a53 156 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 133 1.0E-60 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CLI_RS01335 2307f0299100e605df2f579dddbd2a53 156 PANTHER PTHR30308 1 156 1.8E-84 T 23-04-2016 CLI_RS01335 2307f0299100e605df2f579dddbd2a53 156 SUPERFAMILY SSF74982 3 133 1.19E-54 T 23-04-2016 IPR023620 Small protein B CLI_RS01335 2307f0299100e605df2f579dddbd2a53 156 Pfam PF01668 SmpB protein 10 73 2.2E-34 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CLI_RS01335 2307f0299100e605df2f579dddbd2a53 156 Hamap MF_00023 SsrA-binding protein [smpB]. 1 156 76.684 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 Pfam PF00381 PTS HPr component phosphorylation site 4 88 5.9E-10 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 SUPERFAMILY SSF52540 355 599 4.36E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 Gene3D G3DSA:3.30.1340.10 1 89 2.0E-10 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 Gene3D G3DSA:3.40.50.300 352 528 1.7E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 SMART SM00382 376 520 1.3E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 PANTHER PTHR32071 293 664 2.3E-191 T 23-04-2016 CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 Gene3D G3DSA:1.10.10.60 621 664 1.0E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 380 393 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 SUPERFAMILY SSF55594 1 89 1.31E-7 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 Gene3D G3DSA:3.30.450.20 220 336 9.5E-14 T 23-04-2016 CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 Gene3D G3DSA:1.10.8.60 529 604 4.6E-25 T 23-04-2016 CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 218 277 5.3E-9 T 23-04-2016 IPR000014 PAS domain CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 111 212 6.2E-10 T 23-04-2016 IPR000014 PAS domain CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 SUPERFAMILY SSF55785 107 210 3.89E-13 T 23-04-2016 IPR000014 PAS domain CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 SMART SM00091 220 286 1.8E-7 T 23-04-2016 IPR000014 PAS domain CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 SMART SM00091 110 177 5.6E-7 T 23-04-2016 IPR000014 PAS domain CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 Pfam PF00158 Sigma-54 interaction domain 356 522 3.0E-70 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 SUPERFAMILY SSF46689 610 664 1.08E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 PANTHER PTHR32071:SF26 293 664 2.3E-191 T 23-04-2016 CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 442 457 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 Pfam PF13426 PAS domain 121 211 5.3E-8 T 23-04-2016 IPR000014 PAS domain CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 SUPERFAMILY SSF55785 215 314 7.15E-13 T 23-04-2016 IPR000014 PAS domain CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 569 578 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 Pfam PF00989 PAS fold 221 269 1.9E-9 T 23-04-2016 IPR013767 PAS fold GO:0006355 CLI_RS17630 8fb3acf790ae5f5063f93b335eb02880 669 Gene3D G3DSA:3.30.450.20 105 185 1.4E-12 T 23-04-2016 CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 SUPERFAMILY SSF51735 18 208 1.48E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 SUPERFAMILY SSF52413 318 425 4.58E-26 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 PIRSF PIRSF500136 7 438 1.7E-168 T 23-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 PANTHER PTHR11374:SF4 14 433 2.5E-204 T 23-04-2016 CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 SMART SM00984 333 427 1.5E-31 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 PANTHER PTHR11374 14 433 2.5E-204 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 18 423 3.8E-135 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 334 426 3.8E-23 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 SUPERFAMILY SSF48179 215 308 1.31E-30 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 Gene3D G3DSA:3.40.50.720 247 428 8.6E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 18 195 2.1E-44 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 PIRSF PIRSF000124 17 437 5.6E-69 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 Gene3D G3DSA:3.40.50.720 11 236 3.0E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15485 604469cf32ed005c5b2d2b15288659c6 438 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 216 306 9.2E-28 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 CLI_RS07905 86ef1090ff8bad1fc3c3ce317173fe0c 119 Gene3D G3DSA:1.10.10.10 2 71 3.5E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07905 86ef1090ff8bad1fc3c3ce317173fe0c 119 SMART SM00529 23 119 1.1E-22 T 23-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 CLI_RS07905 86ef1090ff8bad1fc3c3ce317173fe0c 119 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 52 1.6E-9 T 23-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 CLI_RS07905 86ef1090ff8bad1fc3c3ce317173fe0c 119 Gene3D G3DSA:1.10.60.10 73 118 3.2E-16 T 23-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CLI_RS07905 86ef1090ff8bad1fc3c3ce317173fe0c 119 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 62 118 7.4E-17 T 23-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CLI_RS07905 86ef1090ff8bad1fc3c3ce317173fe0c 119 PANTHER PTHR33238 1 117 1.9E-23 T 23-04-2016 CLI_RS07905 86ef1090ff8bad1fc3c3ce317173fe0c 119 SUPERFAMILY SSF46785 1 61 1.96E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07905 86ef1090ff8bad1fc3c3ce317173fe0c 119 SUPERFAMILY SSF47979 62 118 1.7E-16 T 23-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CLI_RS07905 86ef1090ff8bad1fc3c3ce317173fe0c 119 PANTHER PTHR33238:SF1 1 117 1.9E-23 T 23-04-2016 CLI_RS03330 e89884bd9bc358b3072237a086e9190e 217 PANTHER PTHR30055:SF27 1 209 3.0E-38 T 23-04-2016 CLI_RS03330 e89884bd9bc358b3072237a086e9190e 217 Gene3D G3DSA:1.10.10.60 4 54 1.7E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03330 e89884bd9bc358b3072237a086e9190e 217 PANTHER PTHR30055 1 209 3.0E-38 T 23-04-2016 CLI_RS03330 e89884bd9bc358b3072237a086e9190e 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 2.4E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS03330 e89884bd9bc358b3072237a086e9190e 217 SUPERFAMILY SSF46689 8 65 5.64E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03330 e89884bd9bc358b3072237a086e9190e 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.3E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS03330 e89884bd9bc358b3072237a086e9190e 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.3E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS03330 e89884bd9bc358b3072237a086e9190e 217 Gene3D G3DSA:1.10.357.10 56 202 5.5E-35 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS03330 e89884bd9bc358b3072237a086e9190e 217 SUPERFAMILY SSF48498 91 198 4.45E-9 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS07375 55f17fa64b433e1ed25f85048bc8cf9a 747 Gene3D G3DSA:3.30.420.40 214 351 2.6E-30 T 23-04-2016 CLI_RS07375 55f17fa64b433e1ed25f85048bc8cf9a 747 SUPERFAMILY SSF53067 215 382 9.55E-27 T 23-04-2016 CLI_RS07375 55f17fa64b433e1ed25f85048bc8cf9a 747 PANTHER PTHR32432:SF5 1 500 1.2E-250 T 23-04-2016 CLI_RS07375 55f17fa64b433e1ed25f85048bc8cf9a 747 SMART SM00842 12 206 1.3E-48 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CLI_RS07375 55f17fa64b433e1ed25f85048bc8cf9a 747 Pfam PF06723 MreB/Mbl protein 201 353 6.4E-12 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS07375 55f17fa64b433e1ed25f85048bc8cf9a 747 Gene3D G3DSA:3.30.420.40 7 150 2.4E-31 T 23-04-2016 CLI_RS07375 55f17fa64b433e1ed25f85048bc8cf9a 747 SUPERFAMILY SSF53067 13 206 1.64E-24 T 23-04-2016 CLI_RS07375 55f17fa64b433e1ed25f85048bc8cf9a 747 PANTHER PTHR32432 1 500 1.2E-250 T 23-04-2016 CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 Pfam PF00231 ATP synthase 8 280 1.9E-78 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 6 280 1.3E-77 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 PANTHER PTHR11693 4 282 2.3E-89 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 SUPERFAMILY SSF52943 5 280 6.28E-76 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 Hamap MF_00815 ATP synthase gamma chain [atpG]. 3 281 29.062 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 Gene3D G3DSA:3.40.1380.10 69 189 3.1E-33 T 23-04-2016 CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 Gene3D G3DSA:1.10.287.80 215 280 9.5E-45 T 23-04-2016 CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 Gene3D G3DSA:1.10.287.80 6 38 9.5E-45 T 23-04-2016 CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 267 280 - T 23-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 PRINTS PR00126 ATP synthase gamma subunit signature 164 181 2.9E-29 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 PRINTS PR00126 ATP synthase gamma subunit signature 259 280 2.9E-29 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 2.9E-29 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00915 d91766836fbabcf7594ead025d6f9c38 282 PRINTS PR00126 ATP synthase gamma subunit signature 228 247 2.9E-29 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS05465 8166dd384e02bde5c93135e73ba1964f 602 SUPERFAMILY SSF55008 5 70 1.7E-16 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS05465 8166dd384e02bde5c93135e73ba1964f 602 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CLI_RS05465 8166dd384e02bde5c93135e73ba1964f 602 PANTHER PTHR42208 101 331 1.8E-28 T 23-04-2016 CLI_RS05465 8166dd384e02bde5c93135e73ba1964f 602 Pfam PF00403 Heavy-metal-associated domain 8 67 1.3E-11 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS05465 8166dd384e02bde5c93135e73ba1964f 602 PANTHER PTHR42208:SF1 101 331 1.8E-28 T 23-04-2016 CLI_RS05465 8166dd384e02bde5c93135e73ba1964f 602 Gene3D G3DSA:3.30.70.100 5 68 1.1E-17 T 23-04-2016 CLI_RS05465 8166dd384e02bde5c93135e73ba1964f 602 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 111 303 3.0E-51 T 23-04-2016 CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 PANTHER PTHR24362:SF160 576 637 6.1E-116 T 23-04-2016 CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 PANTHER PTHR24362:SF160 1 296 6.1E-116 T 23-04-2016 CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 Gene3D G3DSA:3.30.200.20 2 76 1.4E-25 T 23-04-2016 CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 SMART SM00220 10 267 1.9E-72 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 Pfam PF03793 PASTA domain 511 574 1.7E-12 T 23-04-2016 IPR005543 PASTA domain CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 Pfam PF03793 PASTA domain 374 435 2.2E-12 T 23-04-2016 IPR005543 PASTA domain CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 Pfam PF03793 PASTA domain 440 502 6.7E-15 T 23-04-2016 IPR005543 PASTA domain CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 16 39 - T 23-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 PANTHER PTHR24362 576 637 6.1E-116 T 23-04-2016 CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 PANTHER PTHR24362 1 296 6.1E-116 T 23-04-2016 CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 SUPERFAMILY SSF54184 373 435 3.4E-6 T 23-04-2016 CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 SUPERFAMILY SSF56112 6 264 6.61E-83 T 23-04-2016 IPR011009 Protein kinase-like domain CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 Pfam PF00069 Protein kinase domain 10 258 2.0E-56 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 SMART SM00740 437 503 5.6E-13 T 23-04-2016 IPR005543 PASTA domain CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 SMART SM00740 370 436 1.9E-16 T 23-04-2016 IPR005543 PASTA domain CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 SMART SM00740 506 574 3.8E-7 T 23-04-2016 IPR005543 PASTA domain CLI_RS12525 bad5b7775499fef2be53c3c1cc5d4dea 652 Gene3D G3DSA:1.10.510.10 77 266 1.1E-57 T 23-04-2016 CLI_RS06075 3884499dea210c0f5179a7dd70d341c9 303 PANTHER PTHR21708 1 302 3.9E-86 T 23-04-2016 CLI_RS06075 3884499dea210c0f5179a7dd70d341c9 303 PANTHER PTHR21708:SF24 1 302 3.9E-86 T 23-04-2016 CLI_RS06075 3884499dea210c0f5179a7dd70d341c9 303 SUPERFAMILY SSF51735 1 160 1.39E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS06075 3884499dea210c0f5179a7dd70d341c9 303 Gene3D G3DSA:1.10.1040.10 188 302 1.3E-39 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLI_RS06075 3884499dea210c0f5179a7dd70d341c9 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 151 1.7E-39 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CLI_RS06075 3884499dea210c0f5179a7dd70d341c9 303 SUPERFAMILY SSF48179 180 301 6.46E-30 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLI_RS06075 3884499dea210c0f5179a7dd70d341c9 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 302 3.8E-86 T 23-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CLI_RS06075 3884499dea210c0f5179a7dd70d341c9 303 Gene3D G3DSA:3.40.50.720 1 187 3.6E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS06075 3884499dea210c0f5179a7dd70d341c9 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 179 298 2.4E-37 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 626 26.482 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 23-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 SUPERFAMILY SSF54211 236 488 2.73E-80 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 PIRSF PIRSF002583 1 626 2.8E-201 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 SUPERFAMILY SSF55874 1 212 1.14E-60 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 Pfam PF00183 Hsp90 protein 217 626 2.5E-110 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 Pfam PF00183 Hsp90 protein 184 230 1.0E-7 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 PRINTS PR00775 90kDa heat shock protein signature 23 45 3.4E-55 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 PRINTS PR00775 90kDa heat shock protein signature 115 137 3.4E-55 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 PRINTS PR00775 90kDa heat shock protein signature 90 107 3.4E-55 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 PRINTS PR00775 90kDa heat shock protein signature 165 182 3.4E-55 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 PRINTS PR00775 90kDa heat shock protein signature 188 206 3.4E-55 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 PRINTS PR00775 90kDa heat shock protein signature 2 22 3.4E-55 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 PRINTS PR00775 90kDa heat shock protein signature 72 89 3.4E-55 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 Gene3D G3DSA:3.30.565.10 2 213 5.1E-78 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 PANTHER PTHR11528:SF44 1 626 5.9E-283 T 23-04-2016 CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 151 1.6E-12 T 23-04-2016 CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 PANTHER PTHR11528 1 626 5.9E-283 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CLI_RS10045 d962de61f7460b481a609cac76ab4631 626 SUPERFAMILY SSF110942 511 625 4.71E-30 T 23-04-2016 CLI_RS13675 a328b66afd83a5fcaba9d0a64446f26a 162 PANTHER PTHR35147:SF1 5 162 1.3E-69 T 23-04-2016 CLI_RS13675 a328b66afd83a5fcaba9d0a64446f26a 162 Pfam PF03975 CheD chemotactic sensory transduction 49 154 4.3E-38 T 23-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 CLI_RS13675 a328b66afd83a5fcaba9d0a64446f26a 162 SUPERFAMILY SSF64438 5 160 6.23E-51 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic CLI_RS13675 a328b66afd83a5fcaba9d0a64446f26a 162 PANTHER PTHR35147 5 162 1.3E-69 T 23-04-2016 CLI_RS13675 a328b66afd83a5fcaba9d0a64446f26a 162 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 2 158 28.698 T 23-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 CLI_RS13825 ec11c79c517cec093e5b82a5c1a7a262 473 PANTHER PTHR11206:SF132 4 466 2.4E-150 T 23-04-2016 CLI_RS13825 ec11c79c517cec093e5b82a5c1a7a262 473 PIRSF PIRSF006603 1 457 9.4E-88 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS13825 ec11c79c517cec093e5b82a5c1a7a262 473 PANTHER PTHR11206 4 466 2.4E-150 T 23-04-2016 CLI_RS13825 ec11c79c517cec093e5b82a5c1a7a262 473 Pfam PF01554 MatE 23 184 1.5E-25 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS13825 ec11c79c517cec093e5b82a5c1a7a262 473 Pfam PF01554 MatE 257 408 9.0E-20 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS13825 ec11c79c517cec093e5b82a5c1a7a262 473 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 420 1.3E-51 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS04575 b87eb932d2f099d07aa77964fcd4f1f6 229 SUPERFAMILY SSF51206 27 137 1.3E-25 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CLI_RS04575 b87eb932d2f099d07aa77964fcd4f1f6 229 Pfam PF13545 Crp-like helix-turn-helix domain 154 220 9.5E-13 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS04575 b87eb932d2f099d07aa77964fcd4f1f6 229 PANTHER PTHR24567:SF26 1 228 7.3E-91 T 23-04-2016 CLI_RS04575 b87eb932d2f099d07aa77964fcd4f1f6 229 SUPERFAMILY SSF46785 153 222 2.34E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04575 b87eb932d2f099d07aa77964fcd4f1f6 229 PANTHER PTHR24567 1 228 7.3E-91 T 23-04-2016 CLI_RS04575 b87eb932d2f099d07aa77964fcd4f1f6 229 Gene3D G3DSA:2.60.120.10 25 140 1.1E-22 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS04575 b87eb932d2f099d07aa77964fcd4f1f6 229 Pfam PF00027 Cyclic nucleotide-binding domain 35 116 2.4E-11 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CLI_RS04575 b87eb932d2f099d07aa77964fcd4f1f6 229 Gene3D G3DSA:1.10.10.10 158 222 1.3E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS00520 ab30b6a8f37153b7861d07fbdb570d32 264 Gene3D G3DSA:3.20.20.140 2 258 2.1E-94 T 23-04-2016 CLI_RS00520 ab30b6a8f37153b7861d07fbdb570d32 264 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CLI_RS00520 ab30b6a8f37153b7861d07fbdb570d32 264 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 6 256 1.0E-86 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 CLI_RS00520 ab30b6a8f37153b7861d07fbdb570d32 264 PANTHER PTHR10060:SF20 2 259 1.7E-122 T 23-04-2016 CLI_RS00520 ab30b6a8f37153b7861d07fbdb570d32 264 PIRSF PIRSF005902 1 260 1.1E-86 T 23-04-2016 IPR001130 TatD family GO:0016788 CLI_RS00520 ab30b6a8f37153b7861d07fbdb570d32 264 Pfam PF01026 TatD related DNase 7 256 4.3E-80 T 23-04-2016 IPR001130 TatD family GO:0016788 CLI_RS00520 ab30b6a8f37153b7861d07fbdb570d32 264 SUPERFAMILY SSF51556 4 258 1.09E-87 T 23-04-2016 IPR032466 Metal-dependent hydrolase CLI_RS00520 ab30b6a8f37153b7861d07fbdb570d32 264 PANTHER PTHR10060 2 259 1.7E-122 T 23-04-2016 IPR001130 TatD family GO:0016788 CLI_RS15320 472a4e79291894ef24862700ed668d62 220 Pfam PF13646 HEAT repeats 99 182 1.1E-12 T 23-04-2016 CLI_RS15320 472a4e79291894ef24862700ed668d62 220 SMART SM00567 E-Z type HEAT repeats 140 169 6.4 T 23-04-2016 IPR004155 PBS lyase HEAT-like repeat CLI_RS15320 472a4e79291894ef24862700ed668d62 220 SMART SM00567 E-Z type HEAT repeats 109 138 0.18 T 23-04-2016 IPR004155 PBS lyase HEAT-like repeat CLI_RS15320 472a4e79291894ef24862700ed668d62 220 Pfam PF14493 Helix-turn-helix domain 19 86 6.5E-7 T 23-04-2016 IPR029491 Helicase Helix-turn-helix domain CLI_RS15320 472a4e79291894ef24862700ed668d62 220 SUPERFAMILY SSF48371 94 211 1.64E-17 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 CLI_RS15320 472a4e79291894ef24862700ed668d62 220 Gene3D G3DSA:1.25.10.10 64 216 3.4E-17 T 23-04-2016 IPR011989 Armadillo-like helical CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 PANTHER PTHR11851:SF68 5 975 5.3E-263 T 23-04-2016 CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 PANTHER PTHR11851 5 975 5.3E-263 T 23-04-2016 CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 SUPERFAMILY SSF63411 261 522 2.85E-64 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 Gene3D G3DSA:3.30.830.10 279 389 3.3E-4 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 SUPERFAMILY SSF63411 8 253 1.18E-50 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 SUPERFAMILY SSF63411 523 772 1.45E-66 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 Gene3D G3DSA:3.30.830.10 544 753 3.0E-8 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 Pfam PF00675 Insulinase (Peptidase family M16) 59 134 1.4E-6 T 23-04-2016 IPR011765 Peptidase M16, N-terminal CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 Gene3D G3DSA:3.30.830.10 30 263 2.6E-43 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 Pfam PF05193 Peptidase M16 inactive domain 207 389 3.7E-23 T 23-04-2016 IPR007863 Peptidase M16, C-terminal CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 SMART SM01264 464 714 3.4E-102 T 23-04-2016 IPR013578 Peptidase M16C associated GO:0006508 CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 SUPERFAMILY SSF63411 783 974 2.62E-37 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLI_RS16940 1ab6275cf612c1529fcd4b3a24b1e75f 975 Pfam PF08367 Peptidase M16C associated 465 713 2.7E-79 T 23-04-2016 IPR013578 Peptidase M16C associated GO:0006508 CLI_RS06370 a966b7fc046042f7f858bcdcfb07a2a4 90 Pfam PF12652 CotJB protein 8 84 2.4E-27 T 23-04-2016 IPR024207 Spore coat assembly protein CotJB, domain CLI_RS06370 a966b7fc046042f7f858bcdcfb07a2a4 90 PIRSF PIRSF010606 2 85 1.8E-25 T 23-04-2016 IPR016571 Spore coat assembly protein CotJB CLI_RS15815 6bf4ffb3447cf51801f9872c5a74ca17 468 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 93 104 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS15815 6bf4ffb3447cf51801f9872c5a74ca17 468 Pfam PF04055 Radical SAM superfamily 93 257 2.7E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS15815 6bf4ffb3447cf51801f9872c5a74ca17 468 PANTHER PTHR11228:SF21 31 434 4.4E-41 T 23-04-2016 CLI_RS15815 6bf4ffb3447cf51801f9872c5a74ca17 468 SUPERFAMILY SSF102114 87 420 1.16E-46 T 23-04-2016 CLI_RS15815 6bf4ffb3447cf51801f9872c5a74ca17 468 Gene3D G3DSA:3.20.20.70 85 423 2.4E-48 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS15815 6bf4ffb3447cf51801f9872c5a74ca17 468 TIGRFAM TIGR04068 rSAM_ocin_clost: Cys-rich peptide radical SAM maturase CcpM 6 465 1.6E-206 T 23-04-2016 IPR024001 Cysteine-rich peptide, radical SAM maturase, CcpM CLI_RS15815 6bf4ffb3447cf51801f9872c5a74ca17 468 PANTHER PTHR11228 31 434 4.4E-41 T 23-04-2016 CLI_RS15815 6bf4ffb3447cf51801f9872c5a74ca17 468 Pfam PF13353 4Fe-4S single cluster domain 94 201 5.3E-8 T 23-04-2016 CLI_RS17970 ce750daded7141c8882fd101d837307d 545 Gene3D G3DSA:3.40.50.800 442 542 2.8E-22 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS17970 ce750daded7141c8882fd101d837307d 545 Pfam PF03129 Anticodon binding domain 451 540 1.8E-15 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS17970 ce750daded7141c8882fd101d837307d 545 SUPERFAMILY SSF52954 438 542 2.13E-25 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS17970 ce750daded7141c8882fd101d837307d 545 Pfam PF04073 Aminoacyl-tRNA editing domain 234 354 9.4E-26 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLI_RS17970 ce750daded7141c8882fd101d837307d 545 SUPERFAMILY SSF55826 201 356 8.89E-26 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLI_RS17970 ce750daded7141c8882fd101d837307d 545 SUPERFAMILY SSF55681 21 218 2.56E-16 T 23-04-2016 CLI_RS17970 ce750daded7141c8882fd101d837307d 545 Gene3D G3DSA:3.30.930.10 366 441 1.1E-22 T 23-04-2016 CLI_RS17970 ce750daded7141c8882fd101d837307d 545 Gene3D G3DSA:3.30.930.10 7 187 1.1E-22 T 23-04-2016 CLI_RS17970 ce750daded7141c8882fd101d837307d 545 Gene3D G3DSA:3.90.960.10 233 354 1.4E-24 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLI_RS17970 ce750daded7141c8882fd101d837307d 545 PANTHER PTHR11451 373 542 7.0E-46 T 23-04-2016 CLI_RS17970 ce750daded7141c8882fd101d837307d 545 PANTHER PTHR11451:SF31 373 542 7.0E-46 T 23-04-2016 CLI_RS14650 b08ee1e331f9ffa22cc9c82ba295d418 247 Pfam PF02565 Recombination protein O C terminal 84 238 1.5E-37 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CLI_RS14650 b08ee1e331f9ffa22cc9c82ba295d418 247 PANTHER PTHR33991 2 247 6.3E-56 T 23-04-2016 CLI_RS14650 b08ee1e331f9ffa22cc9c82ba295d418 247 SUPERFAMILY SSF50249 3 79 1.03E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS14650 b08ee1e331f9ffa22cc9c82ba295d418 247 Pfam PF11967 Recombination protein O N terminal 2 79 9.5E-24 T 23-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal CLI_RS14650 b08ee1e331f9ffa22cc9c82ba295d418 247 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 243 3.9E-64 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CLI_RS14650 b08ee1e331f9ffa22cc9c82ba295d418 247 SUPERFAMILY SSF57863 83 228 3.66E-30 T 23-04-2016 CLI_RS14650 b08ee1e331f9ffa22cc9c82ba295d418 247 Gene3D G3DSA:2.40.50.140 2 80 7.7E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS14650 b08ee1e331f9ffa22cc9c82ba295d418 247 Hamap MF_00201 DNA repair protein RecO [recO]. 2 244 27.342 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CLI_RS03960 c4874624ab2ce9adc503730246ebe8ca 66 Pfam PF01381 Helix-turn-helix 10 56 4.8E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS03960 c4874624ab2ce9adc503730246ebe8ca 66 SMART SM00530 7 59 3.0E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS03960 c4874624ab2ce9adc503730246ebe8ca 66 SUPERFAMILY SSF47413 6 55 2.68E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS03960 c4874624ab2ce9adc503730246ebe8ca 66 Gene3D G3DSA:1.10.260.40 6 64 1.9E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 SMART SM00852 187 326 1.3E-38 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 SUPERFAMILY SSF63882 6 182 4.97E-46 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 183 320 1.1E-31 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 Gene3D G3DSA:2.40.340.10 339 408 1.6E-17 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 Pfam PF03453 MoeA N-terminal region (domain I and II) 8 174 2.6E-31 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 Gene3D G3DSA:3.90.105.10 138 169 5.3E-19 T 23-04-2016 CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 Gene3D G3DSA:2.170.190.11 50 137 7.5E-23 T 23-04-2016 CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 PANTHER PTHR10192:SF12 2 408 4.5E-172 T 23-04-2016 CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 SUPERFAMILY SSF63867 337 408 3.53E-12 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 Gene3D G3DSA:3.40.980.10 170 336 9.7E-54 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 PANTHER PTHR10192 2 408 4.5E-172 T 23-04-2016 CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 Pfam PF00994 Probable molybdopterin binding domain 187 323 6.3E-24 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 SUPERFAMILY SSF53218 182 330 1.28E-37 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 260 295 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 CLI_RS09830 6f901b0bc8f7e90beba85a2a0fa89b58 408 Pfam PF03454 MoeA C-terminal region (domain IV) 344 406 1.8E-9 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS01265 4d330d04d8ba2749e3b0ce75562860bf 510 PANTHER PTHR24220 6 382 1.6E-212 T 23-04-2016 CLI_RS01265 4d330d04d8ba2749e3b0ce75562860bf 510 SUPERFAMILY SSF52540 256 489 2.24E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01265 4d330d04d8ba2749e3b0ce75562860bf 510 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS01265 4d330d04d8ba2749e3b0ce75562860bf 510 SUPERFAMILY SSF52540 3 226 1.61E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01265 4d330d04d8ba2749e3b0ce75562860bf 510 SMART SM00382 29 217 6.9E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS01265 4d330d04d8ba2749e3b0ce75562860bf 510 PANTHER PTHR24220:SF239 6 382 1.6E-212 T 23-04-2016 CLI_RS01265 4d330d04d8ba2749e3b0ce75562860bf 510 Gene3D G3DSA:3.40.50.300 254 495 3.6E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01265 4d330d04d8ba2749e3b0ce75562860bf 510 Gene3D G3DSA:3.40.50.300 2 228 2.9E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01265 4d330d04d8ba2749e3b0ce75562860bf 510 Pfam PF00005 ABC transporter 273 429 2.6E-17 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS01265 4d330d04d8ba2749e3b0ce75562860bf 510 Pfam PF00005 ABC transporter 21 169 2.1E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS01925 4d5f7fd1151e2f7554627366719473a0 360 Pfam PF00557 Metallopeptidase family M24 138 343 2.5E-58 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS01925 4d5f7fd1151e2f7554627366719473a0 360 SUPERFAMILY SSF53092 3 130 2.27E-12 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLI_RS01925 4d5f7fd1151e2f7554627366719473a0 360 PANTHER PTHR10804 112 360 1.5E-79 T 23-04-2016 CLI_RS01925 4d5f7fd1151e2f7554627366719473a0 360 PANTHER PTHR10804 13 22 1.5E-79 T 23-04-2016 CLI_RS01925 4d5f7fd1151e2f7554627366719473a0 360 SUPERFAMILY SSF55920 133 360 3.01E-70 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS01925 4d5f7fd1151e2f7554627366719473a0 360 Gene3D G3DSA:3.40.350.10 2 129 1.1E-12 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLI_RS01925 4d5f7fd1151e2f7554627366719473a0 360 PANTHER PTHR10804:SF86 112 360 1.5E-79 T 23-04-2016 CLI_RS01925 4d5f7fd1151e2f7554627366719473a0 360 PANTHER PTHR10804:SF86 13 22 1.5E-79 T 23-04-2016 CLI_RS01925 4d5f7fd1151e2f7554627366719473a0 360 Pfam PF01321 Creatinase/Prolidase N-terminal domain 5 130 6.3E-14 T 23-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 CLI_RS01925 4d5f7fd1151e2f7554627366719473a0 360 Gene3D G3DSA:3.90.230.10 130 360 2.8E-80 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS05695 7aefd443ca1b5beb1f348d73ed71c49b 270 Pfam PF03180 NLPA lipoprotein 37 270 1.4E-96 T 23-04-2016 IPR004872 Lipoprotein NlpA family CLI_RS05695 7aefd443ca1b5beb1f348d73ed71c49b 270 SUPERFAMILY SSF53850 36 270 3.86E-85 T 23-04-2016 CLI_RS05695 7aefd443ca1b5beb1f348d73ed71c49b 270 PIRSF PIRSF002854 1 270 3.4E-109 T 23-04-2016 IPR004872 Lipoprotein NlpA family CLI_RS05695 7aefd443ca1b5beb1f348d73ed71c49b 270 PANTHER PTHR30429:SF0 2 270 1.1E-149 T 23-04-2016 CLI_RS05695 7aefd443ca1b5beb1f348d73ed71c49b 270 PANTHER PTHR30429 2 270 1.1E-149 T 23-04-2016 IPR004872 Lipoprotein NlpA family CLI_RS05695 7aefd443ca1b5beb1f348d73ed71c49b 270 Gene3D G3DSA:3.40.190.10 34 163 1.3E-57 T 23-04-2016 CLI_RS14155 fd997411f77ba6cfe96d0274f44d8c25 238 PANTHER PTHR13707 1 223 6.3E-83 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CLI_RS14155 fd997411f77ba6cfe96d0274f44d8c25 238 SUPERFAMILY SSF100950 3 233 4.19E-73 T 23-04-2016 CLI_RS14155 fd997411f77ba6cfe96d0274f44d8c25 238 Pfam PF01144 Coenzyme A transferase 5 216 3.6E-57 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CLI_RS14155 fd997411f77ba6cfe96d0274f44d8c25 238 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 216 9.0E-58 T 23-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 CLI_RS14155 fd997411f77ba6cfe96d0274f44d8c25 238 SMART SM00882 4 217 1.5E-64 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CLI_RS14155 fd997411f77ba6cfe96d0274f44d8c25 238 Gene3D G3DSA:3.40.1080.10 2 216 5.3E-76 T 23-04-2016 CLI_RS17315 c34bf99c32573aab8d9205ac2ca97f01 315 Gene3D G3DSA:3.10.28.10 118 207 2.2E-13 T 23-04-2016 IPR027434 Homing endonuclease GO:0004519 CLI_RS17315 c34bf99c32573aab8d9205ac2ca97f01 315 Gene3D G3DSA:3.10.28.10 24 105 7.3E-5 T 23-04-2016 IPR027434 Homing endonuclease GO:0004519 CLI_RS17315 c34bf99c32573aab8d9205ac2ca97f01 315 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 20 106 6.7E-28 T 23-04-2016 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain CLI_RS17315 c34bf99c32573aab8d9205ac2ca97f01 315 PANTHER PTHR37307 2 314 6.9E-120 T 23-04-2016 CLI_RS17315 c34bf99c32573aab8d9205ac2ca97f01 315 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 5 309 4.8E-113 T 23-04-2016 CLI_RS17315 c34bf99c32573aab8d9205ac2ca97f01 315 Pfam PF02650 WhiA C-terminal HTH domain 225 308 8.0E-37 T 23-04-2016 IPR023054 Sporulation regulator WhiA, C-terminal CLI_RS17315 c34bf99c32573aab8d9205ac2ca97f01 315 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 311 35.014 T 23-04-2016 IPR003802 Sporulation regulator WhiA GO:0043937 CLI_RS17315 c34bf99c32573aab8d9205ac2ca97f01 315 Pfam PF14527 WhiA LAGLIDADG-like domain 131 222 2.8E-38 T 23-04-2016 CLI_RS17315 c34bf99c32573aab8d9205ac2ca97f01 315 SUPERFAMILY SSF55608 119 226 4.86E-21 T 23-04-2016 IPR027434 Homing endonuclease GO:0004519 CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 SMART SM00267 183 357 1.5E-58 T 23-04-2016 IPR000160 GGDEF domain CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 Gene3D G3DSA:3.30.70.270 196 359 6.2E-50 T 23-04-2016 CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 Gene3D G3DSA:1.10.3210.10 389 553 3.5E-23 T 23-04-2016 IPR006674 HD domain CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 SUPERFAMILY SSF55073 199 358 3.06E-47 T 23-04-2016 IPR029787 Nucleotide cyclase CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 190 356 1.0E-55 T 23-04-2016 IPR000160 GGDEF domain CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 PANTHER PTHR10799:SF750 80 355 1.8E-34 T 23-04-2016 CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 PANTHER PTHR10799:SF750 454 555 1.8E-34 T 23-04-2016 CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 SUPERFAMILY SSF109604 379 553 2.07E-37 T 23-04-2016 CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 SMART SM00471 389 524 5.0E-8 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 PANTHER PTHR10799 80 355 1.8E-34 T 23-04-2016 CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 PANTHER PTHR10799 454 555 1.8E-34 T 23-04-2016 CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 Pfam PF01966 HD domain 393 515 4.6E-19 T 23-04-2016 IPR006674 HD domain CLI_RS01870 80a7cd5202f455438943b9d14e4ee849 567 Pfam PF00990 Diguanylate cyclase, GGDEF domain 195 352 1.6E-47 T 23-04-2016 IPR000160 GGDEF domain CLI_RS16475 ead40ba79a073e9b543ba00f2653862c 251 Gene3D G3DSA:3.40.50.80 102 207 1.5E-27 T 23-04-2016 CLI_RS16475 ead40ba79a073e9b543ba00f2653862c 251 Gene3D G3DSA:2.10.240.10 209 246 1.7E-17 T 23-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 CLI_RS16475 ead40ba79a073e9b543ba00f2653862c 251 SUPERFAMILY SSF63380 7 98 1.09E-20 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLI_RS16475 ead40ba79a073e9b543ba00f2653862c 251 Gene3D G3DSA:2.40.30.10 7 96 4.4E-26 T 23-04-2016 CLI_RS16475 ead40ba79a073e9b543ba00f2653862c 251 PIRSF PIRSF006816 5 251 2.3E-68 T 23-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 CLI_RS16475 ead40ba79a073e9b543ba00f2653862c 251 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 8 247 34.903 T 23-04-2016 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit UniPathway: UPA00070 CLI_RS16475 ead40ba79a073e9b543ba00f2653862c 251 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 209 245 1.1E-15 T 23-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 CLI_RS16475 ead40ba79a073e9b543ba00f2653862c 251 SUPERFAMILY SSF52343 93 245 1.28E-26 T 23-04-2016 CLI_RS16475 ead40ba79a073e9b543ba00f2653862c 251 PANTHER PTHR11938 50 251 5.0E-81 T 23-04-2016 CLI_RS16475 ead40ba79a073e9b543ba00f2653862c 251 Pfam PF00970 Oxidoreductase FAD-binding domain 10 96 2.8E-5 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain CLI_RS16475 ead40ba79a073e9b543ba00f2653862c 251 PANTHER PTHR11938:SF4 50 251 5.0E-81 T 23-04-2016 CLI_RS11305 834ff666e9d5146cbde3b393d01b46ef 227 Gene3D G3DSA:3.40.50.300 2 214 2.3E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11305 834ff666e9d5146cbde3b393d01b46ef 227 PANTHER PTHR21343 1 227 2.5E-81 T 23-04-2016 CLI_RS11305 834ff666e9d5146cbde3b393d01b46ef 227 PIRSF PIRSF006755 1 222 5.4E-53 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 CLI_RS11305 834ff666e9d5146cbde3b393d01b46ef 227 Pfam PF13500 AAA domain 3 206 1.1E-34 T 23-04-2016 CLI_RS11305 834ff666e9d5146cbde3b393d01b46ef 227 SUPERFAMILY SSF52540 1 216 6.13E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11305 834ff666e9d5146cbde3b393d01b46ef 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 225 24.956 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 CLI_RS11305 834ff666e9d5146cbde3b393d01b46ef 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 179 3.6E-39 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 CLI_RS11305 834ff666e9d5146cbde3b393d01b46ef 227 PANTHER PTHR21343:SF0 1 227 2.5E-81 T 23-04-2016 CLI_RS08085 68b3d40bf7adab7f937566712705541e 110 SUPERFAMILY SSF141734 6 108 9.94E-49 T 23-04-2016 CLI_RS08085 68b3d40bf7adab7f937566712705541e 110 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 106 1.1E-36 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CLI_RS08085 68b3d40bf7adab7f937566712705541e 110 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 106 2.0E-20 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CLI_RS08085 68b3d40bf7adab7f937566712705541e 110 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 7 110 30.808 T 23-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CLI_RS08085 68b3d40bf7adab7f937566712705541e 110 PANTHER PTHR21256 1 107 6.0E-65 T 23-04-2016 CLI_RS00465 043ac1fb6dfadb49a3160fa930f39013 155 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 155 34.074 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS00465 043ac1fb6dfadb49a3160fa930f39013 155 Pfam PF02542 YgbB family 1 154 7.6E-66 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS00465 043ac1fb6dfadb49a3160fa930f39013 155 Gene3D G3DSA:3.30.1330.50 1 154 2.2E-68 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS00465 043ac1fb6dfadb49a3160fa930f39013 155 SUPERFAMILY SSF69765 1 154 5.1E-65 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS00465 043ac1fb6dfadb49a3160fa930f39013 155 PANTHER PTHR32125 1 154 1.7E-55 T 23-04-2016 CLI_RS00465 043ac1fb6dfadb49a3160fa930f39013 155 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 154 1.5E-66 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS00465 043ac1fb6dfadb49a3160fa930f39013 155 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS15535 53c1fa77769b97ae7e4f381b751aaa23 486 PANTHER PTHR11751:SF435 10 459 1.9E-127 T 23-04-2016 CLI_RS15535 53c1fa77769b97ae7e4f381b751aaa23 486 Gene3D G3DSA:3.90.1150.10 318 395 2.0E-12 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS15535 53c1fa77769b97ae7e4f381b751aaa23 486 Gene3D G3DSA:3.90.100.10 396 484 5.8E-27 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLI_RS15535 53c1fa77769b97ae7e4f381b751aaa23 486 Gene3D G3DSA:3.40.640.10 9 286 1.6E-106 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS15535 53c1fa77769b97ae7e4f381b751aaa23 486 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 376 468 5.0E-10 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLI_RS15535 53c1fa77769b97ae7e4f381b751aaa23 486 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 9 373 6.9E-95 T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CLI_RS15535 53c1fa77769b97ae7e4f381b751aaa23 486 PANTHER PTHR11751 10 459 1.9E-127 T 23-04-2016 CLI_RS15535 53c1fa77769b97ae7e4f381b751aaa23 486 SUPERFAMILY SSF53383 9 387 4.87E-98 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS15535 53c1fa77769b97ae7e4f381b751aaa23 486 SUPERFAMILY SSF55904 345 485 1.83E-35 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLI_RS07570 e2fbc08c3d3f3148d351ca333f83dcd4 256 SUPERFAMILY SSF55174 46 125 4.56E-19 T 23-04-2016 CLI_RS07570 e2fbc08c3d3f3148d351ca333f83dcd4 256 SUPERFAMILY SSF55174 177 250 4.56E-19 T 23-04-2016 CLI_RS07570 e2fbc08c3d3f3148d351ca333f83dcd4 256 PANTHER PTHR32219:SF5 10 256 1.2E-60 T 23-04-2016 CLI_RS07570 e2fbc08c3d3f3148d351ca333f83dcd4 256 PANTHER PTHR32219 10 256 1.2E-60 T 23-04-2016 CLI_RS07570 e2fbc08c3d3f3148d351ca333f83dcd4 256 Gene3D G3DSA:3.10.290.10 180 232 2.1E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 Gene3D G3DSA:3.40.50.300 1039 1199 8.2E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 Pfam PF13087 AAA domain 1011 1194 3.3E-17 T 23-04-2016 CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 PANTHER PTHR10887 16 118 2.2E-95 T 23-04-2016 CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 PANTHER PTHR10887 170 346 2.2E-95 T 23-04-2016 CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 PANTHER PTHR10887 1007 1228 2.2E-95 T 23-04-2016 CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 PANTHER PTHR10887 802 982 2.2E-95 T 23-04-2016 CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 SUPERFAMILY SSF52540 928 1205 1.12E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 SUPERFAMILY SSF52540 437 465 1.12E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 SUPERFAMILY SSF52540 258 332 1.12E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 Pfam PF13245 Part of AAA domain 274 324 1.2E-9 T 23-04-2016 CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 Gene3D G3DSA:3.40.50.300 229 374 2.6E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 Gene3D G3DSA:3.40.50.300 944 1038 2.6E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 PANTHER PTHR10887:SF340 16 118 2.2E-95 T 23-04-2016 CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 PANTHER PTHR10887:SF340 170 346 2.2E-95 T 23-04-2016 CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 PANTHER PTHR10887:SF340 1007 1228 2.2E-95 T 23-04-2016 CLI_RS00640 6f26cf45a44663ca0bfc1d1fe1ac2d05 1350 PANTHER PTHR10887:SF340 802 982 2.2E-95 T 23-04-2016 CLI_RS09790 522d8bf28502551e9e114d924e4f3834 227 SUPERFAMILY SSF69572 2 222 1.01E-63 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLI_RS09790 522d8bf28502551e9e114d924e4f3834 227 Gene3D G3DSA:3.40.50.720 2 225 1.7E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS09790 522d8bf28502551e9e114d924e4f3834 227 PANTHER PTHR10953 2 160 1.1E-45 T 23-04-2016 CLI_RS09790 522d8bf28502551e9e114d924e4f3834 227 Pfam PF00899 ThiF family 4 221 4.2E-45 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLI_RS09165 f0a769e1783dfd75a584755a7fa65502 178 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 6 170 3.7E-23 T 23-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 CLI_RS09165 f0a769e1783dfd75a584755a7fa65502 178 PANTHER PTHR11839 6 172 6.9E-64 T 23-04-2016 CLI_RS09165 f0a769e1783dfd75a584755a7fa65502 178 PRINTS PR00502 NUDIX hydrolase family signature 85 100 1.66E-6 T 23-04-2016 IPR020476 NUDIX hydrolase CLI_RS09165 f0a769e1783dfd75a584755a7fa65502 178 PRINTS PR00502 NUDIX hydrolase family signature 71 85 1.66E-6 T 23-04-2016 IPR020476 NUDIX hydrolase CLI_RS09165 f0a769e1783dfd75a584755a7fa65502 178 Pfam PF00293 NUDIX domain 41 153 6.1E-20 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CLI_RS09165 f0a769e1783dfd75a584755a7fa65502 178 PANTHER PTHR11839:SF9 6 172 6.9E-64 T 23-04-2016 CLI_RS09165 f0a769e1783dfd75a584755a7fa65502 178 SUPERFAMILY SSF55811 6 172 8.12E-49 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLI_RS09165 f0a769e1783dfd75a584755a7fa65502 178 Gene3D G3DSA:3.90.79.10 5 172 1.4E-57 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLI_RS13600 33f0ada7f497db84dd457dd8a9b1a75e 118 PANTHER PTHR37166 1 118 3.0E-34 T 23-04-2016 CLI_RS13600 33f0ada7f497db84dd457dd8a9b1a75e 118 Pfam PF03646 FlaG protein 28 116 1.7E-20 T 23-04-2016 IPR005186 FlaG protein CLI_RS13600 33f0ada7f497db84dd457dd8a9b1a75e 118 SUPERFAMILY SSF160214 40 118 4.45E-22 T 23-04-2016 IPR005186 FlaG protein CLI_RS13600 33f0ada7f497db84dd457dd8a9b1a75e 118 PANTHER PTHR37166:SF1 1 118 3.0E-34 T 23-04-2016 CLI_RS13600 33f0ada7f497db84dd457dd8a9b1a75e 118 Gene3D G3DSA:3.30.160.170 28 114 6.6E-22 T 23-04-2016 IPR005186 FlaG protein CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 66 7.6E-15 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 141 4.4E-15 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 SUPERFAMILY SSF52540 162 473 2.96E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 Gene3D G3DSA:1.10.1780.10 1 145 9.5E-40 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 297 309 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 Pfam PF02151 UvrB/uvrC motif 419 453 7.1E-7 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 Gene3D G3DSA:3.40.50.300 702 730 3.0E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 Gene3D G3DSA:3.40.50.300 492 665 3.0E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 SMART SM01086 719 808 1.5E-35 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 543 561 5.9E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 588 606 5.9E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 664 5.9E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 617 635 5.9E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 573 591 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 Gene3D G3DSA:1.10.8.60 731 808 2.8E-31 T 23-04-2016 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 Pfam PF07724 AAA domain (Cdc48 subfamily) 538 713 8.9E-59 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 Gene3D G3DSA:1.10.8.60 347 430 3.7E-34 T 23-04-2016 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 SUPERFAMILY SSF52540 488 808 6.23E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 SUPERFAMILY SSF81923 5 148 4.81E-28 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 719 799 1.2E-27 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 PANTHER PTHR11638 1 808 0.0 T 23-04-2016 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 207 319 2.1E-15 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 SMART SM00382 202 346 4.4E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 SMART SM00382 539 685 1.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 Gene3D G3DSA:3.40.50.300 163 345 1.4E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18000 6716d19509d265b14da4e463219c0a37 811 PANTHER PTHR11638:SF18 1 808 0.0 T 23-04-2016 CLI_RS13590 195916838c5cd1a0d51ca036aac3628b 129 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 121 6.3E-32 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CLI_RS13590 195916838c5cd1a0d51ca036aac3628b 129 Pfam PF02561 Flagellar protein FliS 7 120 2.1E-41 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CLI_RS13590 195916838c5cd1a0d51ca036aac3628b 129 PANTHER PTHR34773 1 125 1.3E-41 T 23-04-2016 CLI_RS13590 195916838c5cd1a0d51ca036aac3628b 129 Gene3D G3DSA:1.20.120.340 5 122 8.0E-42 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CLI_RS13590 195916838c5cd1a0d51ca036aac3628b 129 SUPERFAMILY SSF101116 5 123 5.23E-39 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CLI_RS13590 195916838c5cd1a0d51ca036aac3628b 129 PIRSF PIRSF039090 1 129 3.9E-44 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CLI_RS03295 41dea98e6f2fca00adc79e1e0ce07da4 270 Gene3D G3DSA:3.40.50.2300 1 126 4.8E-26 T 23-04-2016 CLI_RS03295 41dea98e6f2fca00adc79e1e0ce07da4 270 Gene3D G3DSA:1.10.10.10 141 225 7.6E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03295 41dea98e6f2fca00adc79e1e0ce07da4 270 SUPERFAMILY SSF52172 1 125 1.57E-25 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS03295 41dea98e6f2fca00adc79e1e0ce07da4 270 PANTHER PTHR26402 1 246 7.6E-66 T 23-04-2016 CLI_RS03295 41dea98e6f2fca00adc79e1e0ce07da4 270 PANTHER PTHR26402:SF561 1 246 7.6E-66 T 23-04-2016 CLI_RS03295 41dea98e6f2fca00adc79e1e0ce07da4 270 Pfam PF00072 Response regulator receiver domain 3 114 4.0E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS03295 41dea98e6f2fca00adc79e1e0ce07da4 270 SMART SM00448 1 115 3.4E-11 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS03295 41dea98e6f2fca00adc79e1e0ce07da4 270 Pfam PF08664 YcbB domain 146 264 1.4E-35 T 23-04-2016 IPR013972 YcbB domain CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.2E-7 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.2E-7 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 SMART SM00420 6 58 4.3E-17 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 SUPERFAMILY SSF100950 75 233 1.26E-25 T 23-04-2016 CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 Pfam PF00455 DeoR C terminal sensor domain 77 231 1.7E-45 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 Gene3D G3DSA:1.10.10.10 3 58 2.4E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 PANTHER PTHR30363:SF13 1 255 5.9E-116 T 23-04-2016 CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 PANTHER PTHR30363 1 255 5.9E-116 T 23-04-2016 CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 SUPERFAMILY SSF46785 4 78 1.66E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.7E-17 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 Gene3D G3DSA:3.40.50.1360 77 213 7.0E-9 T 23-04-2016 CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLI_RS08300 9698bbe00dc9b67cc5456dad1f77d48c 255 SMART SM01134 73 232 6.3E-58 T 23-04-2016 CLI_RS05100 c7580a454364e3a8f9b92a3ffd46323b 240 Pfam PF00072 Response regulator receiver domain 11 120 2.2E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS05100 c7580a454364e3a8f9b92a3ffd46323b 240 Gene3D G3DSA:3.40.50.2300 6 128 3.5E-36 T 23-04-2016 CLI_RS05100 c7580a454364e3a8f9b92a3ffd46323b 240 Gene3D G3DSA:1.10.10.10 134 235 3.0E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05100 c7580a454364e3a8f9b92a3ffd46323b 240 SMART SM00448 9 120 1.9E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS05100 c7580a454364e3a8f9b92a3ffd46323b 240 SUPERFAMILY SSF46894 134 235 5.39E-28 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS05100 c7580a454364e3a8f9b92a3ffd46323b 240 PANTHER PTHR26402:SF611 9 235 1.3E-150 T 23-04-2016 CLI_RS05100 c7580a454364e3a8f9b92a3ffd46323b 240 PANTHER PTHR26402 9 235 1.3E-150 T 23-04-2016 CLI_RS05100 c7580a454364e3a8f9b92a3ffd46323b 240 SUPERFAMILY SSF52172 4 137 3.56E-38 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS05100 c7580a454364e3a8f9b92a3ffd46323b 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 234 1.6E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS05100 c7580a454364e3a8f9b92a3ffd46323b 240 SMART SM00862 158 234 8.1E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS13745 1bffea56a40998fb1bd389821ce89cca 272 Gene3D G3DSA:3.20.20.150 23 265 1.0E-43 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS13745 1bffea56a40998fb1bd389821ce89cca 272 PANTHER PTHR21445 1 272 9.3E-59 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CLI_RS13745 1bffea56a40998fb1bd389821ce89cca 272 Pfam PF01261 Xylose isomerase-like TIM barrel 28 232 5.5E-21 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS13745 1bffea56a40998fb1bd389821ce89cca 272 SUPERFAMILY SSF51658 4 271 8.7E-59 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS13745 1bffea56a40998fb1bd389821ce89cca 272 SMART SM00518 1 269 3.9E-55 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CLI_RS18545 3bb6f9feb323dcb7959d170f289b4f16 144 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 5 141 2.5E-57 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CLI_RS18545 3bb6f9feb323dcb7959d170f289b4f16 144 Pfam PF07977 FabA-like domain 14 137 1.0E-34 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CLI_RS18545 3bb6f9feb323dcb7959d170f289b4f16 144 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 5 144 33.73 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CLI_RS18545 3bb6f9feb323dcb7959d170f289b4f16 144 SUPERFAMILY SSF54637 7 142 2.56E-44 T 23-04-2016 IPR029069 HotDog domain CLI_RS18545 3bb6f9feb323dcb7959d170f289b4f16 144 PANTHER PTHR30272 1 144 4.2E-79 T 23-04-2016 CLI_RS18545 3bb6f9feb323dcb7959d170f289b4f16 144 Gene3D G3DSA:3.10.129.10 4 143 6.0E-55 T 23-04-2016 IPR029069 HotDog domain CLI_RS18605 49d2ce2eccb0711dd76d72c09525ab9f 325 PANTHER PTHR30050:SF7 29 325 1.4E-114 T 23-04-2016 CLI_RS18605 49d2ce2eccb0711dd76d72c09525ab9f 325 Gene3D G3DSA:3.40.50.300 119 309 3.8E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18605 49d2ce2eccb0711dd76d72c09525ab9f 325 SUPERFAMILY SSF52540 155 310 4.01E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18605 49d2ce2eccb0711dd76d72c09525ab9f 325 Pfam PF01695 IstB-like ATP binding protein 151 289 1.6E-18 T 23-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 CLI_RS18605 49d2ce2eccb0711dd76d72c09525ab9f 325 PANTHER PTHR30050 29 325 1.4E-114 T 23-04-2016 CLI_RS01215 eb7fd7865d9c9d41fa78b37eb0a79ef4 390 PIRSF PIRSF000106 22 390 2.2E-87 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 CLI_RS01215 eb7fd7865d9c9d41fa78b37eb0a79ef4 390 SUPERFAMILY SSF53223 6 158 5.11E-57 T 23-04-2016 CLI_RS01215 eb7fd7865d9c9d41fa78b37eb0a79ef4 390 SMART SM00919 160 383 1.5E-129 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CLI_RS01215 eb7fd7865d9c9d41fa78b37eb0a79ef4 390 Gene3D G3DSA:3.40.50.10380 4 157 7.8E-58 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLI_RS01215 eb7fd7865d9c9d41fa78b37eb0a79ef4 390 PANTHER PTHR23406 20 390 8.6E-244 T 23-04-2016 CLI_RS01215 eb7fd7865d9c9d41fa78b37eb0a79ef4 390 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CLI_RS01215 eb7fd7865d9c9d41fa78b37eb0a79ef4 390 PANTHER PTHR23406:SF23 20 390 8.6E-244 T 23-04-2016 CLI_RS01215 eb7fd7865d9c9d41fa78b37eb0a79ef4 390 SMART SM01274 15 148 6.5E-83 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLI_RS01215 eb7fd7865d9c9d41fa78b37eb0a79ef4 390 SUPERFAMILY SSF51735 160 389 8.15E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01215 eb7fd7865d9c9d41fa78b37eb0a79ef4 390 Pfam PF03949 Malic enzyme, NAD binding domain 162 382 1.2E-28 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CLI_RS01215 eb7fd7865d9c9d41fa78b37eb0a79ef4 390 Pfam PF00390 Malic enzyme, N-terminal domain 26 148 4.1E-29 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLI_RS01215 eb7fd7865d9c9d41fa78b37eb0a79ef4 390 Gene3D G3DSA:3.40.50.720 158 388 5.5E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS10585 2cf1ae85553339a59ad7941d837b0cf1 497 Gene3D G3DSA:3.40.605.10 10 232 9.5E-25 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CLI_RS10585 2cf1ae85553339a59ad7941d837b0cf1 497 PANTHER PTHR11699:SF168 1 471 1.6E-142 T 23-04-2016 CLI_RS10585 2cf1ae85553339a59ad7941d837b0cf1 497 Gene3D G3DSA:3.40.309.10 233 286 1.6E-22 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLI_RS10585 2cf1ae85553339a59ad7941d837b0cf1 497 Gene3D G3DSA:3.40.309.10 323 406 1.6E-22 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLI_RS10585 2cf1ae85553339a59ad7941d837b0cf1 497 SUPERFAMILY SSF53720 10 448 2.36E-70 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CLI_RS10585 2cf1ae85553339a59ad7941d837b0cf1 497 PANTHER PTHR11699 1 471 1.6E-142 T 23-04-2016 CLI_RS10585 2cf1ae85553339a59ad7941d837b0cf1 497 Pfam PF00171 Aldehyde dehydrogenase family 12 273 2.9E-24 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CLI_RS02375 85904e360b7786ef237b0a6aff4ff1c1 1150 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1147 68.439 T 23-04-2016 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 CLI_RS02375 85904e360b7786ef237b0a6aff4ff1c1 1150 Gene3D G3DSA:3.40.50.300 301 384 1.6E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02375 85904e360b7786ef237b0a6aff4ff1c1 1150 Gene3D G3DSA:3.40.50.300 572 676 1.6E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02375 85904e360b7786ef237b0a6aff4ff1c1 1150 PANTHER PTHR41262:SF1 2 1150 0.0 T 23-04-2016 CLI_RS02375 85904e360b7786ef237b0a6aff4ff1c1 1150 Pfam PF12705 PD-(D/E)XK nuclease superfamily 775 1116 7.0E-56 T 23-04-2016 CLI_RS02375 85904e360b7786ef237b0a6aff4ff1c1 1150 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 333 683 5.8E-16 T 23-04-2016 CLI_RS02375 85904e360b7786ef237b0a6aff4ff1c1 1150 Gene3D G3DSA:3.40.50.300 175 231 6.4E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02375 85904e360b7786ef237b0a6aff4ff1c1 1150 Gene3D G3DSA:3.40.50.300 5 87 6.4E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02375 85904e360b7786ef237b0a6aff4ff1c1 1150 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 1 1145 0.0 T 23-04-2016 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 CLI_RS02375 85904e360b7786ef237b0a6aff4ff1c1 1150 SUPERFAMILY SSF52540 289 735 3.93E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02375 85904e360b7786ef237b0a6aff4ff1c1 1150 PANTHER PTHR41262 2 1150 0.0 T 23-04-2016 CLI_RS08580 df70a9a651608f09bb2122beeac78983 394 Pfam PF07690 Major Facilitator Superfamily 18 360 7.3E-44 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS08580 df70a9a651608f09bb2122beeac78983 394 SUPERFAMILY SSF103473 14 389 2.35E-56 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS08580 df70a9a651608f09bb2122beeac78983 394 PANTHER PTHR23504 1 394 2.0E-219 T 23-04-2016 CLI_RS08580 df70a9a651608f09bb2122beeac78983 394 PANTHER PTHR23504:SF37 1 394 2.0E-219 T 23-04-2016 CLI_RS08580 df70a9a651608f09bb2122beeac78983 394 Gene3D G3DSA:1.20.1250.20 17 205 3.8E-32 T 23-04-2016 CLI_RS08580 df70a9a651608f09bb2122beeac78983 394 Gene3D G3DSA:1.20.1250.20 224 389 2.4E-17 T 23-04-2016 CLI_RS06770 bdf563053283b206e2e3a7d6bf5ac86e 572 PANTHER PTHR24221 1 563 1.4E-226 T 23-04-2016 CLI_RS06770 bdf563053283b206e2e3a7d6bf5ac86e 572 PANTHER PTHR24221:SF240 1 563 1.4E-226 T 23-04-2016 CLI_RS06770 bdf563053283b206e2e3a7d6bf5ac86e 572 Gene3D G3DSA:3.40.50.300 331 560 2.1E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06770 bdf563053283b206e2e3a7d6bf5ac86e 572 Gene3D G3DSA:1.20.1560.10 3 318 1.5E-69 T 23-04-2016 CLI_RS06770 bdf563053283b206e2e3a7d6bf5ac86e 572 Pfam PF00005 ABC transporter 348 497 4.5E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS06770 bdf563053283b206e2e3a7d6bf5ac86e 572 SUPERFAMILY SSF90123 3 317 1.96E-73 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS06770 bdf563053283b206e2e3a7d6bf5ac86e 572 SMART SM00382 357 549 1.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06770 bdf563053283b206e2e3a7d6bf5ac86e 572 SUPERFAMILY SSF52540 322 564 3.48E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06770 bdf563053283b206e2e3a7d6bf5ac86e 572 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS06770 bdf563053283b206e2e3a7d6bf5ac86e 572 Pfam PF00664 ABC transporter transmembrane region 19 286 1.5E-40 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS00650 bdf38eb5795573ed19586a87ddf9eafd 431 Hamap MF_01074 UPF0272 protein . 2 431 40.57 T 23-04-2016 IPR002822 Uncharacterised protein family UPF0272 CLI_RS00650 bdf38eb5795573ed19586a87ddf9eafd 431 Gene3D G3DSA:3.30.70.1380 283 373 2.6E-31 T 23-04-2016 CLI_RS00650 bdf38eb5795573ed19586a87ddf9eafd 431 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 4 423 3.8E-111 T 23-04-2016 IPR002822 Uncharacterised protein family UPF0272 CLI_RS00650 bdf38eb5795573ed19586a87ddf9eafd 431 PANTHER PTHR36566:SF1 3 68 3.6E-104 T 23-04-2016 CLI_RS00650 bdf38eb5795573ed19586a87ddf9eafd 431 PANTHER PTHR36566:SF1 99 429 3.6E-104 T 23-04-2016 CLI_RS00650 bdf38eb5795573ed19586a87ddf9eafd 431 PANTHER PTHR36566 3 68 3.6E-104 T 23-04-2016 CLI_RS00650 bdf38eb5795573ed19586a87ddf9eafd 431 PANTHER PTHR36566 99 429 3.6E-104 T 23-04-2016 CLI_RS00650 bdf38eb5795573ed19586a87ddf9eafd 431 Pfam PF01969 Protein of unknown function DUF111 5 423 6.3E-154 T 23-04-2016 IPR002822 Uncharacterised protein family UPF0272 CLI_RS00650 bdf38eb5795573ed19586a87ddf9eafd 431 Gene3D G3DSA:3.10.20.300 374 428 8.5E-21 T 23-04-2016 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 Gene3D G3DSA:3.30.365.10 366 456 8.7E-49 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 Gene3D G3DSA:3.30.365.10 628 771 8.7E-49 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 SMART SM01008 21 125 2.5E-44 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 159 713 5.9E-137 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 21 125 2.2E-27 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 PANTHER PTHR11908 575 771 0.0 T 23-04-2016 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 PANTHER PTHR11908 161 554 0.0 T 23-04-2016 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 PANTHER PTHR11908 5 144 0.0 T 23-04-2016 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 Gene3D G3DSA:3.30.365.10 290 364 9.8E-29 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 Gene3D G3DSA:3.30.365.10 114 181 9.8E-29 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 Gene3D G3DSA:3.30.365.10 182 287 4.1E-28 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 SUPERFAMILY SSF54665 3 146 4.97E-43 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 Gene3D G3DSA:3.30.365.10 457 594 5.3E-34 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 Gene3D G3DSA:3.90.1170.50 5 113 6.1E-39 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 SUPERFAMILY SSF56003 117 771 8.77E-162 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 PANTHER PTHR11908:SF95 575 771 0.0 T 23-04-2016 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 PANTHER PTHR11908:SF95 161 554 0.0 T 23-04-2016 CLI_RS01510 971f495faa3c96e362d62b972afb0c59 776 PANTHER PTHR11908:SF95 5 144 0.0 T 23-04-2016 CLI_RS18800 7915baa33ce99f7bed4a5ba61669515f 282 SUPERFAMILY SSF109709 108 217 5.23E-32 T 23-04-2016 CLI_RS18800 7915baa33ce99f7bed4a5ba61669515f 282 PANTHER PTHR33375:SF3 7 282 1.8E-151 T 23-04-2016 CLI_RS18800 7915baa33ce99f7bed4a5ba61669515f 282 SUPERFAMILY SSF110849 28 118 2.54E-27 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CLI_RS18800 7915baa33ce99f7bed4a5ba61669515f 282 PANTHER PTHR33375 7 282 1.8E-151 T 23-04-2016 CLI_RS18800 7915baa33ce99f7bed4a5ba61669515f 282 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 26 202 7.0E-58 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CLI_RS18800 7915baa33ce99f7bed4a5ba61669515f 282 SMART SM00470 27 116 1.3E-28 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CLI_RS18800 7915baa33ce99f7bed4a5ba61669515f 282 Pfam PF02195 ParB-like nuclease domain 29 116 8.2E-24 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CLI_RS18800 7915baa33ce99f7bed4a5ba61669515f 282 Gene3D G3DSA:3.90.1530.10 19 122 1.1E-38 T 23-04-2016 CLI_RS14945 eb82bfc1de60bccd6ae44571d5a76edf 194 SUPERFAMILY SSF52972 3 189 1.18E-60 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CLI_RS14945 eb82bfc1de60bccd6ae44571d5a76edf 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 187 3.1E-57 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CLI_RS14945 eb82bfc1de60bccd6ae44571d5a76edf 194 Pfam PF02545 Maf-like protein 4 189 1.1E-58 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CLI_RS14945 eb82bfc1de60bccd6ae44571d5a76edf 194 PIRSF PIRSF006305 1 194 6.4E-62 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CLI_RS14945 eb82bfc1de60bccd6ae44571d5a76edf 194 Gene3D G3DSA:3.90.950.10 2 193 4.3E-67 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CLI_RS14945 eb82bfc1de60bccd6ae44571d5a76edf 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 194 30.569 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CLI_RS14945 eb82bfc1de60bccd6ae44571d5a76edf 194 PANTHER PTHR11746 123 188 6.6E-17 T 23-04-2016 CLI_RS09470 bf5ca428cf0cae6124843eafb7634fdb 273 SUPERFAMILY SSF52172 5 138 8.82E-34 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS09470 bf5ca428cf0cae6124843eafb7634fdb 273 Gene3D G3DSA:3.40.50.2300 2 128 2.0E-33 T 23-04-2016 CLI_RS09470 bf5ca428cf0cae6124843eafb7634fdb 273 Gene3D G3DSA:1.10.10.10 156 271 7.4E-61 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09470 bf5ca428cf0cae6124843eafb7634fdb 273 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 163 271 4.0E-56 T 23-04-2016 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 CLI_RS09470 bf5ca428cf0cae6124843eafb7634fdb 273 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 5 272 1.1E-132 T 23-04-2016 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 CLI_RS09470 bf5ca428cf0cae6124843eafb7634fdb 273 PANTHER PTHR26402 6 163 2.3E-34 T 23-04-2016 CLI_RS09470 bf5ca428cf0cae6124843eafb7634fdb 273 SMART SM00448 6 121 2.8E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS09470 bf5ca428cf0cae6124843eafb7634fdb 273 Pfam PF00072 Response regulator receiver domain 8 121 2.7E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS09470 bf5ca428cf0cae6124843eafb7634fdb 273 PANTHER PTHR26402:SF511 6 163 2.3E-34 T 23-04-2016 CLI_RS09470 bf5ca428cf0cae6124843eafb7634fdb 273 PIRSF PIRSF002937 1 273 4.2E-139 T 23-04-2016 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 CLI_RS09470 bf5ca428cf0cae6124843eafb7634fdb 273 SUPERFAMILY SSF46894 157 271 5.02E-50 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS09470 bf5ca428cf0cae6124843eafb7634fdb 273 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 163 266 2.2E-47 T 23-04-2016 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 CLI_RS14950 3aaddc951bd1bb6c368da3106dab2e5f 85 Pfam PF14209 Domain of unknown function (DUF4321) 36 83 1.8E-17 T 23-04-2016 IPR025470 Protein of unknown function DUF4321 CLI_RS01120 8bc492cd601f47fdbd7a482a6137d60b 179 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 23 140 7.0E-40 T 23-04-2016 CLI_RS01120 8bc492cd601f47fdbd7a482a6137d60b 179 PANTHER PTHR21028:SF2 2 179 1.2E-41 T 23-04-2016 CLI_RS01120 8bc492cd601f47fdbd7a482a6137d60b 179 SMART SM01118 1 175 2.2E-7 T 23-04-2016 IPR023577 CYTH domain CLI_RS01120 8bc492cd601f47fdbd7a482a6137d60b 179 Gene3D G3DSA:2.40.320.10 3 174 5.0E-30 T 23-04-2016 IPR023577 CYTH domain CLI_RS01120 8bc492cd601f47fdbd7a482a6137d60b 179 SUPERFAMILY SSF55154 3 173 6.7E-30 T 23-04-2016 IPR033469 CYTH-like domain CLI_RS01120 8bc492cd601f47fdbd7a482a6137d60b 179 PANTHER PTHR21028 2 179 1.2E-41 T 23-04-2016 CLI_RS01120 8bc492cd601f47fdbd7a482a6137d60b 179 Pfam PF01928 CYTH domain 2 167 3.2E-22 T 23-04-2016 IPR023577 CYTH domain CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 SUPERFAMILY SSF47807 172 287 8.97E-35 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 Gene3D G3DSA:3.30.70.370 610 658 2.4E-65 T 23-04-2016 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 Gene3D G3DSA:3.30.70.370 766 875 2.4E-65 T 23-04-2016 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 SUPERFAMILY SSF88723 3 171 2.69E-55 T 23-04-2016 IPR029060 PIN domain-like CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 TIGRFAM TIGR00593 pola: DNA polymerase I 6 875 8.0E-303 T 23-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 Gene3D G3DSA:1.10.150.20 187 247 3.6E-30 T 23-04-2016 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 Gene3D G3DSA:1.20.1060.10 491 609 6.3E-41 T 23-04-2016 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 Gene3D G3DSA:3.30.420.10 311 489 1.5E-29 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 ProSitePatterns PS00447 DNA polymerase family A signature. 701 720 - T 23-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 Pfam PF01612 3'-5' exonuclease 322 443 1.4E-4 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 SMART SM00482 632 839 8.6E-115 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 Pfam PF00476 DNA polymerase family A 500 873 1.1E-153 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 SUPERFAMILY SSF53098 305 467 7.13E-25 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 Gene3D G3DSA:3.40.50.1010 5 186 4.8E-69 T 23-04-2016 IPR029060 PIN domain-like CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 738 749 1.7E-74 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 677 690 1.7E-74 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 647 670 1.7E-74 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 760 771 1.7E-74 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 624 639 1.7E-74 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 792 808 1.7E-74 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 701 726 1.7E-74 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 822 835 1.7E-74 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 601 623 1.7E-74 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 SUPERFAMILY SSF56672 470 875 1.89E-151 T 23-04-2016 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 171 4.9E-53 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 PANTHER PTHR10133:SF27 1 875 0.0 T 23-04-2016 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 264 7.8E-35 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 Gene3D G3DSA:1.10.150.20 659 765 4.0E-37 T 23-04-2016 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 SMART SM00475 2 263 1.3E-129 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 PANTHER PTHR10133 1 875 0.0 T 23-04-2016 CLI_RS14995 04e03667ec7cd4b31a98d068fcae04a1 875 SMART SM00279 174 209 4.6E-17 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CLI_RS06420 572c07ec568f6eb68e0abfa4d27c21ec 177 Gene3D G3DSA:1.10.260.40 1 62 2.5E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS06420 572c07ec568f6eb68e0abfa4d27c21ec 177 Gene3D G3DSA:2.60.120.10 63 163 1.6E-17 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS06420 572c07ec568f6eb68e0abfa4d27c21ec 177 SMART SM00530 6 61 2.1E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS06420 572c07ec568f6eb68e0abfa4d27c21ec 177 PANTHER PTHR10245:SF53 1 172 8.8E-64 T 23-04-2016 CLI_RS06420 572c07ec568f6eb68e0abfa4d27c21ec 177 SUPERFAMILY SSF47413 1 67 3.94E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS06420 572c07ec568f6eb68e0abfa4d27c21ec 177 PANTHER PTHR10245 1 172 8.8E-64 T 23-04-2016 CLI_RS06420 572c07ec568f6eb68e0abfa4d27c21ec 177 Pfam PF07883 Cupin domain 118 169 4.0E-13 T 23-04-2016 IPR013096 Cupin 2, conserved barrel CLI_RS06420 572c07ec568f6eb68e0abfa4d27c21ec 177 SUPERFAMILY SSF51182 54 174 7.79E-17 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS06420 572c07ec568f6eb68e0abfa4d27c21ec 177 Pfam PF01381 Helix-turn-helix 7 60 3.4E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 SUPERFAMILY SSF55979 244 364 2.51E-34 T 23-04-2016 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 SUPERFAMILY SSF55979 1 117 3.34E-27 T 23-04-2016 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 SUPERFAMILY SSF55979 123 242 4.45E-27 T 23-04-2016 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 117 3.4E-30 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 Gene3D G3DSA:3.10.150.10 1 119 9.7E-28 T 23-04-2016 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 Gene3D G3DSA:3.10.150.10 122 246 4.0E-36 T 23-04-2016 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 PIRSF PIRSF000804 1 365 6.5E-114 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 239 6.6E-29 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 243 363 1.1E-29 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 PANTHER PTHR30478 2 366 2.8E-135 T 23-04-2016 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 SMART SM00480 17 360 7.0E-114 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 364 1.9E-95 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS00015 03d57016926c8b708cc589f002ee9302 367 Gene3D G3DSA:3.10.150.10 247 365 6.6E-36 T 23-04-2016 CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 Gene3D G3DSA:3.40.50.300 289 510 1.7E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 PANTHER PTHR11361 14 598 5.2E-245 T 23-04-2016 CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 SMART SM00534 325 510 5.7E-76 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 PANTHER PTHR11361:SF14 14 598 5.2E-245 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 SUPERFAMILY SSF52540 289 510 1.62E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 407 423 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 TIGRFAM TIGR01069 mutS2: MutS2 family protein 2 788 9.5E-223 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 787 21.771 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 PIRSF PIRSF005814 1 788 1.8E-266 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 SUPERFAMILY SSF160443 712 788 1.44E-10 T 23-04-2016 IPR002625 Smr domain CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 SMART SM00533 9 312 8.3E-20 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 SMART SM00463 710 788 6.4E-15 T 23-04-2016 IPR002625 Smr domain CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 SUPERFAMILY SSF48334 64 287 4.58E-16 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 Pfam PF00488 MutS domain V 329 509 2.6E-36 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS15560 f575d78473a3faba9d94cb544a9c6e1e 788 Pfam PF01713 Smr domain 713 788 9.3E-21 T 23-04-2016 IPR002625 Smr domain CLI_RS14870 cf665e73f857d0da3edda93cb313bb9f 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 102 2.9E-43 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 CLI_RS14870 cf665e73f857d0da3edda93cb313bb9f 104 PANTHER PTHR21349 1 102 7.2E-45 T 23-04-2016 CLI_RS14870 cf665e73f857d0da3edda93cb313bb9f 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 103 7.6E-39 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14870 cf665e73f857d0da3edda93cb313bb9f 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 104 27.886 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14870 cf665e73f857d0da3edda93cb313bb9f 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 23-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14870 cf665e73f857d0da3edda93cb313bb9f 104 SUPERFAMILY SSF141091 1 103 2.35E-39 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 CLI_RS05670 b9c8ce2a8bfc9ec3f30dae129e491f7d 241 PANTHER PTHR10000 1 233 4.8E-138 T 23-04-2016 CLI_RS05670 b9c8ce2a8bfc9ec3f30dae129e491f7d 241 PANTHER PTHR10000:SF11 1 233 4.8E-138 T 23-04-2016 CLI_RS05670 b9c8ce2a8bfc9ec3f30dae129e491f7d 241 SUPERFAMILY SSF56784 3 229 8.81E-29 T 23-04-2016 IPR023214 HAD-like domain CLI_RS05670 b9c8ce2a8bfc9ec3f30dae129e491f7d 241 Gene3D G3DSA:3.40.50.1000 79 210 8.8E-34 T 23-04-2016 IPR023214 HAD-like domain CLI_RS05670 b9c8ce2a8bfc9ec3f30dae129e491f7d 241 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 4 205 4.1E-61 T 23-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial CLI_RS05670 b9c8ce2a8bfc9ec3f30dae129e491f7d 241 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 192 1.1E-19 T 23-04-2016 CLI_RS05670 b9c8ce2a8bfc9ec3f30dae129e491f7d 241 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 194 6.2E-38 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CLI_RS12820 7151330d6ecb7fd9f31b581ca6d97d5f 137 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 136 26.74 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CLI_RS12820 7151330d6ecb7fd9f31b581ca6d97d5f 137 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 133 1.7E-43 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CLI_RS12820 7151330d6ecb7fd9f31b581ca6d97d5f 137 SUPERFAMILY SSF53098 1 135 1.08E-43 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS12820 7151330d6ecb7fd9f31b581ca6d97d5f 137 PANTHER PTHR33317 1 136 1.7E-49 T 23-04-2016 CLI_RS12820 7151330d6ecb7fd9f31b581ca6d97d5f 137 SMART SM00732 1 101 1.3E-39 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CLI_RS12820 7151330d6ecb7fd9f31b581ca6d97d5f 137 Gene3D G3DSA:3.30.420.140 1 135 2.2E-50 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CLI_RS12820 7151330d6ecb7fd9f31b581ca6d97d5f 137 Pfam PF03652 Holliday junction resolvase 1 134 2.9E-45 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CLI_RS17965 1659d2d0f265add1966a87ca6b3a1009 405 SUPERFAMILY SSF55021 327 399 1.14E-5 T 23-04-2016 CLI_RS17965 1659d2d0f265add1966a87ca6b3a1009 405 SUPERFAMILY SSF53686 5 314 3.54E-104 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS17965 1659d2d0f265add1966a87ca6b3a1009 405 Gene3D G3DSA:3.30.70.260 325 393 2.3E-6 T 23-04-2016 CLI_RS17965 1659d2d0f265add1966a87ca6b3a1009 405 PANTHER PTHR10314 2 356 5.1E-170 T 23-04-2016 CLI_RS17965 1659d2d0f265add1966a87ca6b3a1009 405 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 22 400 1.2E-146 T 23-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 CLI_RS17965 1659d2d0f265add1966a87ca6b3a1009 405 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 43 56 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CLI_RS17965 1659d2d0f265add1966a87ca6b3a1009 405 PANTHER PTHR10314:SF17 2 356 5.1E-170 T 23-04-2016 CLI_RS17965 1659d2d0f265add1966a87ca6b3a1009 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 304 4.3E-83 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS17965 1659d2d0f265add1966a87ca6b3a1009 405 Gene3D G3DSA:3.40.50.1100 70 321 2.6E-79 T 23-04-2016 CLI_RS01270 c1d03cdcb810b70731dba4ff26c5cf06 367 PANTHER PTHR32196:SF30 5 362 1.8E-133 T 23-04-2016 CLI_RS01270 c1d03cdcb810b70731dba4ff26c5cf06 367 Pfam PF02653 Branched-chain amino acid transport system / permease component 74 346 1.1E-37 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLI_RS01270 c1d03cdcb810b70731dba4ff26c5cf06 367 PANTHER PTHR32196 5 362 1.8E-133 T 23-04-2016 CLI_RS13110 1810433eaa3ff51a8b84209c851dcca5 389 Gene3D G3DSA:3.40.50.360 246 386 2.4E-39 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS13110 1810433eaa3ff51a8b84209c851dcca5 389 SUPERFAMILY SSF52218 247 389 1.62E-33 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS13110 1810433eaa3ff51a8b84209c851dcca5 389 SUPERFAMILY SSF56281 4 239 3.93E-46 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS13110 1810433eaa3ff51a8b84209c851dcca5 389 PIRSF PIRSF005243 1 389 7.0E-131 T 23-04-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CLI_RS13110 1810433eaa3ff51a8b84209c851dcca5 389 PANTHER PTHR32145 1 389 8.2E-233 T 23-04-2016 CLI_RS13110 1810433eaa3ff51a8b84209c851dcca5 389 PANTHER PTHR32145:SF18 1 389 8.2E-233 T 23-04-2016 CLI_RS13110 1810433eaa3ff51a8b84209c851dcca5 389 Pfam PF00258 Flavodoxin 250 371 6.2E-8 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLI_RS13110 1810433eaa3ff51a8b84209c851dcca5 389 Gene3D G3DSA:3.60.15.10 2 239 4.2E-83 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS13110 1810433eaa3ff51a8b84209c851dcca5 389 Pfam PF00753 Metallo-beta-lactamase superfamily 35 165 3.1E-7 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS13110 1810433eaa3ff51a8b84209c851dcca5 389 SMART SM00849 34 220 1.2E-23 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 SUPERFAMILY SSF54665 3 161 5.5E-44 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 Gene3D G3DSA:3.30.365.10 453 599 9.2E-46 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 SMART SM01008 22 138 2.0E-45 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 PANTHER PTHR11908 2 556 0.0 T 23-04-2016 CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 PANTHER PTHR11908 576 765 0.0 T 23-04-2016 CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 Gene3D G3DSA:3.30.365.10 290 365 9.3E-36 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 Gene3D G3DSA:3.30.365.10 140 182 9.3E-36 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 22 138 4.2E-29 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 Gene3D G3DSA:3.30.365.10 616 759 1.3E-57 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 Gene3D G3DSA:3.30.365.10 366 452 1.3E-57 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 Gene3D G3DSA:3.90.1170.50 3 138 1.2E-42 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 Gene3D G3DSA:3.30.365.10 183 288 3.1E-34 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 PANTHER PTHR11908:SF95 2 556 0.0 T 23-04-2016 CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 PANTHER PTHR11908:SF95 576 765 0.0 T 23-04-2016 CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 SUPERFAMILY SSF56003 142 760 3.01E-182 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS06660 b6dfb49d9147ed4f54f71db6cb7df319 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 154 700 1.4E-167 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 TIGRFAM TIGR01857 FGAM-synthase: phosphoribosylformylglycinamidine synthase 7 1252 0.0 T 23-04-2016 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 SMART SM01211 989 1252 2.5E-121 T 23-04-2016 CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 PANTHER PTHR10099 5 237 4.0E-302 T 23-04-2016 CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 PANTHER PTHR10099 264 1227 4.0E-302 T 23-04-2016 CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 SUPERFAMILY SSF52317 986 1252 7.7E-73 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 SUPERFAMILY SSF55326 636 816 1.7E-41 T 23-04-2016 CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 SUPERFAMILY SSF56042 818 958 2.24E-12 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 SUPERFAMILY SSF55326 296 433 5.58E-33 T 23-04-2016 CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 SUPERFAMILY SSF55326 206 233 5.58E-33 T 23-04-2016 CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 Gene3D G3DSA:3.40.50.880 989 1228 7.4E-14 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 Pfam PF02769 AIR synthase related protein, C-terminal domain 442 591 1.0E-19 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 989 1252 3.1E-91 T 23-04-2016 CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 Gene3D G3DSA:3.30.1330.10 222 237 1.1E-55 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 Gene3D G3DSA:3.30.1330.10 291 431 1.1E-55 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 Gene3D G3DSA:3.30.1330.10 651 811 1.1E-31 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CLI_RS12910 0c90a3263ef8c12ee65fb9398779e307 1253 SUPERFAMILY SSF56042 441 607 4.78E-34 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 390 8.0E-186 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 Gene3D G3DSA:3.30.300.10 10 143 2.3E-47 T 23-04-2016 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 PANTHER PTHR11964 4 386 2.2E-286 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 99 1.7E-44 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 124 134 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 SUPERFAMILY SSF55973 3 108 6.67E-48 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 Pfam PF02772 S-adenosylmethionine synthetase, central domain 123 239 1.6E-50 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 Gene3D G3DSA:3.30.300.10 144 241 1.7E-48 T 23-04-2016 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 391 58.23 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 SUPERFAMILY SSF55973 241 389 3.57E-69 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 Gene3D G3DSA:3.30.300.10 252 390 2.6E-71 T 23-04-2016 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 SUPERFAMILY SSF55973 119 240 3.14E-53 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 PIRSF PIRSF000497 1 391 9.1E-177 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 241 380 1.3E-70 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CLI_RS00995 fa9273c3d095651d95e59cf54b0ea621 391 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 267 275 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 Gene3D G3DSA:1.10.10.60 1 57 3.8E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 Pfam PF14526 Integron-associated effector binding protein 136 288 3.2E-32 T 23-04-2016 IPR029441 Integron-associated effector binding protein CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 Pfam PF12833 Helix-turn-helix domain 28 105 2.1E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 PANTHER PTHR36444 52 289 4.0E-31 T 23-04-2016 CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 SUPERFAMILY SSF46689 5 55 7.17E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 PANTHER PTHR36444:SF2 52 289 4.0E-31 T 23-04-2016 CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 Gene3D G3DSA:3.20.80.10 130 289 9.5E-40 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 SUPERFAMILY SSF46689 58 108 4.35E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 SMART SM00871 132 289 1.4E-31 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 7.8E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 7.8E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 SUPERFAMILY SSF55136 134 289 1.13E-26 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 Gene3D G3DSA:1.10.10.60 58 106 1.9E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04715 be0cdeda28264fe07fe1a39961ddc342 289 SMART SM00342 21 104 4.9E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 SMART SM01134 79 239 1.4E-58 T 23-04-2016 CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 SMART SM00420 8 60 6.7E-16 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 SUPERFAMILY SSF100950 80 237 4.81E-28 T 23-04-2016 CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 Gene3D G3DSA:3.40.50.1360 81 222 2.3E-9 T 23-04-2016 CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 PANTHER PTHR30363 2 263 6.8E-90 T 23-04-2016 CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 Pfam PF00455 DeoR C terminal sensor domain 81 237 5.1E-44 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 3.7E-9 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 3.7E-9 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 SUPERFAMILY SSF46785 8 62 2.07E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 PANTHER PTHR30363:SF1 2 263 6.8E-90 T 23-04-2016 CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 Gene3D G3DSA:1.10.10.10 3 50 3.3E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06595 3b0b8037427f9cdd44cabbbe8aa29fce 264 Pfam PF08220 DeoR-like helix-turn-helix domain 8 62 3.4E-17 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS14820 49ef03ffc3be51e81c24694b573adf97 415 PANTHER PTHR21581:SF1 1 302 6.6E-94 T 23-04-2016 CLI_RS14820 49ef03ffc3be51e81c24694b573adf97 415 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 366 1.4E-5 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS14820 49ef03ffc3be51e81c24694b573adf97 415 PANTHER PTHR21581 1 302 6.6E-94 T 23-04-2016 CLI_RS14820 49ef03ffc3be51e81c24694b573adf97 415 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 110 127 3.2E-12 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLI_RS14820 49ef03ffc3be51e81c24694b573adf97 415 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 3.2E-12 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLI_RS14820 49ef03ffc3be51e81c24694b573adf97 415 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 137 150 3.2E-12 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLI_RS14820 49ef03ffc3be51e81c24694b573adf97 415 SUPERFAMILY SSF56601 6 280 3.06E-70 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS14820 49ef03ffc3be51e81c24694b573adf97 415 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 258 4.8E-56 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CLI_RS14820 49ef03ffc3be51e81c24694b573adf97 415 Gene3D G3DSA:3.40.710.10 11 279 7.1E-87 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS14820 49ef03ffc3be51e81c24694b573adf97 415 SMART SM00936 280 367 1.1E-4 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS06945 7860a18e29e304ebdc9fe47a643a0eb8 223 PANTHER PTHR26402 1 220 1.4E-71 T 23-04-2016 CLI_RS06945 7860a18e29e304ebdc9fe47a643a0eb8 223 SMART SM00862 145 220 1.5E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS06945 7860a18e29e304ebdc9fe47a643a0eb8 223 PANTHER PTHR26402:SF553 1 220 1.4E-71 T 23-04-2016 CLI_RS06945 7860a18e29e304ebdc9fe47a643a0eb8 223 SMART SM00448 1 112 1.7E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS06945 7860a18e29e304ebdc9fe47a643a0eb8 223 Pfam PF00072 Response regulator receiver domain 4 112 2.4E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS06945 7860a18e29e304ebdc9fe47a643a0eb8 223 Gene3D G3DSA:3.40.50.2300 1 122 4.7E-34 T 23-04-2016 CLI_RS06945 7860a18e29e304ebdc9fe47a643a0eb8 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.7E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS06945 7860a18e29e304ebdc9fe47a643a0eb8 223 SUPERFAMILY SSF52172 1 168 1.85E-36 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS06945 7860a18e29e304ebdc9fe47a643a0eb8 223 Gene3D G3DSA:1.10.10.10 123 220 3.1E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 Gene3D G3DSA:3.30.565.10 259 413 1.1E-48 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 PANTHER PTHR24423 134 417 2.2E-115 T 23-04-2016 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 PANTHER PTHR24423 35 77 2.2E-115 T 23-04-2016 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 Pfam PF00512 His Kinase A (phospho-acceptor) domain 195 256 3.9E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 Gene3D G3DSA:1.10.287.130 184 254 4.2E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 PANTHER PTHR24423:SF546 134 417 2.2E-115 T 23-04-2016 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 PANTHER PTHR24423:SF546 35 77 2.2E-115 T 23-04-2016 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 SMART SM00387 302 414 6.4E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 SUPERFAMILY SSF55874 249 412 4.85E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 Pfam PF00672 HAMP domain 120 188 7.9E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 303 411 4.1E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 SUPERFAMILY SSF47384 177 259 5.49E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 SUPERFAMILY SSF158472 141 189 4.58E-6 T 23-04-2016 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 367 5.3E-19 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 353 5.3E-19 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 411 5.3E-19 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 392 5.3E-19 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 SMART SM00388 194 258 4.8E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01545 37b94fa38f660998bb04fb6c2f1539a5 417 SMART SM00304 140 193 0.0054 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 PANTHER PTHR11638 1 865 0.0 T 23-04-2016 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 PANTHER PTHR11638:SF18 1 865 0.0 T 23-04-2016 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 Gene3D G3DSA:1.10.8.60 347 432 2.9E-35 T 23-04-2016 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 SUPERFAMILY SSF52540 553 856 5.06E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 638 656 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 Pfam PF07724 AAA domain (Cdc48 subfamily) 603 768 1.2E-55 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 SMART SM00382 604 756 4.4E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 SMART SM00382 202 348 4.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 Gene3D G3DSA:1.10.1780.10 1 152 1.2E-40 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 207 308 7.4E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 774 853 2.7E-26 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 Gene3D G3DSA:1.10.8.60 786 864 2.1E-30 T 23-04-2016 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 863 0.0 T 23-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 SUPERFAMILY SSF81923 4 160 3.79E-38 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 715 729 2.6E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 608 626 2.6E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 671 2.6E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 682 700 2.6E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 68 5.1E-13 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 97 149 9.2E-12 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 SUPERFAMILY SSF52540 162 552 7.38E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 Gene3D G3DSA:3.40.50.300 163 345 2.0E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 Gene3D G3DSA:3.40.50.300 558 785 2.9E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 SMART SM01086 774 863 2.2E-35 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CLI_RS02260 c71b5c3faf22eade49ecef0be83363e0 866 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 298 310 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 CLI_RS06210 1d511e8722ba6301dc33df5e9d32e863 550 Gene3D G3DSA:3.50.50.60 510 547 3.2E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06210 1d511e8722ba6301dc33df5e9d32e863 550 Gene3D G3DSA:3.50.50.60 237 360 3.2E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06210 1d511e8722ba6301dc33df5e9d32e863 550 SUPERFAMILY SSF51905 505 546 8.51E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06210 1d511e8722ba6301dc33df5e9d32e863 550 SUPERFAMILY SSF51905 38 379 8.51E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06210 1d511e8722ba6301dc33df5e9d32e863 550 SUPERFAMILY SSF54373 361 491 2.12E-14 T 23-04-2016 CLI_RS06210 1d511e8722ba6301dc33df5e9d32e863 550 Pfam PF01593 Flavin containing amine oxidoreductase 49 542 2.7E-42 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 CLI_RS06210 1d511e8722ba6301dc33df5e9d32e863 550 PANTHER PTHR10742:SF277 1 550 2.8E-148 T 23-04-2016 CLI_RS06210 1d511e8722ba6301dc33df5e9d32e863 550 PANTHER PTHR10742 1 550 2.8E-148 T 23-04-2016 CLI_RS06210 1d511e8722ba6301dc33df5e9d32e863 550 Gene3D G3DSA:3.90.660.10 71 141 3.2E-53 T 23-04-2016 CLI_RS06210 1d511e8722ba6301dc33df5e9d32e863 550 Gene3D G3DSA:3.90.660.10 364 482 3.2E-53 T 23-04-2016 CLI_RS06210 1d511e8722ba6301dc33df5e9d32e863 550 Gene3D G3DSA:3.40.50.720 33 70 4.1E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 PANTHER PTHR30473:SF2 187 451 1.8E-197 T 23-04-2016 CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 SUPERFAMILY SSF88723 3 64 2.75E-13 T 23-04-2016 IPR029060 PIN domain-like CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 SUPERFAMILY SSF88723 93 144 2.75E-13 T 23-04-2016 IPR029060 PIN domain-like CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 PANTHER PTHR30473 2 169 1.8E-197 T 23-04-2016 CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 SUPERFAMILY SSF52540 233 323 3.22E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 SUPERFAMILY SSF52540 125 191 3.22E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 SUPERFAMILY SSF52540 351 417 3.22E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 Gene3D G3DSA:3.40.50.1010 4 142 1.9E-13 T 23-04-2016 IPR029060 PIN domain-like CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 Pfam PF02562 PhoH-like protein 234 451 1.6E-50 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 PANTHER PTHR30473:SF2 2 169 1.8E-197 T 23-04-2016 CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 SMART SM00670 3 128 6.3E-9 T 23-04-2016 IPR002716 PIN domain CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 Pfam PF13638 PIN domain 5 140 2.2E-33 T 23-04-2016 IPR002716 PIN domain CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 Gene3D G3DSA:3.40.50.300 233 452 6.6E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02640 603b73054215a36cf6f07890897a0d4e 458 PANTHER PTHR30473 187 451 1.8E-197 T 23-04-2016 CLI_RS10930 deef97ef896665ce50d69b37b230382c 343 Gene3D G3DSA:3.40.50.1820 27 341 1.6E-91 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS10930 deef97ef896665ce50d69b37b230382c 343 SUPERFAMILY SSF53474 89 339 3.5E-68 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS10930 deef97ef896665ce50d69b37b230382c 343 Pfam PF07859 alpha/beta hydrolase fold 110 317 1.0E-71 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CLI_RS10930 deef97ef896665ce50d69b37b230382c 343 PANTHER PTHR23024:SF24 92 343 1.4E-93 T 23-04-2016 CLI_RS10930 deef97ef896665ce50d69b37b230382c 343 PANTHER PTHR23024 92 343 1.4E-93 T 23-04-2016 CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 Hamap MF_01518 Adenine deaminase [ade]. 28 594 36.587 T 23-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 TIGRFAM TIGR01178 ade: adenine deaminase 28 595 4.0E-168 T 23-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 Pfam PF13382 Adenine deaminase C-terminal domain 426 591 1.3E-68 T 23-04-2016 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 Pfam PF01979 Amidohydrolase family 80 368 4.4E-20 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 SUPERFAMILY SSF51556 84 334 4.99E-17 T 23-04-2016 IPR032466 Metal-dependent hydrolase CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 Gene3D G3DSA:2.30.40.10 281 372 2.0E-15 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 PANTHER PTHR11113 14 370 6.7E-240 T 23-04-2016 CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 PANTHER PTHR11113 417 589 6.7E-240 T 23-04-2016 CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 Gene3D G3DSA:2.30.40.10 16 123 1.4E-21 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 SUPERFAMILY SSF51338 337 375 3.89E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 SUPERFAMILY SSF51338 19 84 3.89E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 PANTHER PTHR11113:SF2 14 370 6.7E-240 T 23-04-2016 CLI_RS01690 3a96b6f0a9e485932af4a185d811051b 599 PANTHER PTHR11113:SF2 417 589 6.7E-240 T 23-04-2016 CLI_RS02500 565eef9183364e83658384b719a34ff6 263 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 7 253 1.9E-86 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02500 565eef9183364e83658384b719a34ff6 263 PANTHER PTHR20857:SF19 5 263 6.6E-91 T 23-04-2016 CLI_RS02500 565eef9183364e83658384b719a34ff6 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 116 130 9.9E-32 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02500 565eef9183364e83658384b719a34ff6 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 59 67 9.9E-32 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02500 565eef9183364e83658384b719a34ff6 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 15 22 9.9E-32 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02500 565eef9183364e83658384b719a34ff6 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 85 102 9.9E-32 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02500 565eef9183364e83658384b719a34ff6 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 160 177 9.9E-32 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02500 565eef9183364e83658384b719a34ff6 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 28 49 9.9E-32 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02500 565eef9183364e83658384b719a34ff6 263 SUPERFAMILY SSF53613 7 261 1.71E-58 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS02500 565eef9183364e83658384b719a34ff6 263 PIRSF PIRSF000513 1 263 1.7E-87 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02500 565eef9183364e83658384b719a34ff6 263 Pfam PF02110 Hydroxyethylthiazole kinase family 7 252 2.2E-82 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02500 565eef9183364e83658384b719a34ff6 263 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 9 255 30.806 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02500 565eef9183364e83658384b719a34ff6 263 Gene3D G3DSA:3.40.1190.20 5 261 1.9E-84 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS02500 565eef9183364e83658384b719a34ff6 263 PANTHER PTHR20857 5 263 6.6E-91 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 SUPERFAMILY SSF81653 121 218 4.58E-25 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 524 4.6E-32 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 Gene3D G3DSA:2.70.150.10 16 25 4.2E-29 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS10510 404a9601609809a139f3662c73378b04 623 Gene3D G3DSA:2.70.150.10 113 219 4.2E-29 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS10510 404a9601609809a139f3662c73378b04 623 SUPERFAMILY SSF81665 219 304 2.48E-12 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 SUPERFAMILY SSF81665 41 79 2.48E-12 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 SUPERFAMILY SSF81665 561 591 2.48E-12 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 65 614 4.9E-128 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 SUPERFAMILY SSF56784 368 611 1.98E-47 T 23-04-2016 IPR023214 HAD-like domain CLI_RS10510 404a9601609809a139f3662c73378b04 623 SUPERFAMILY SSF56784 309 328 1.98E-47 T 23-04-2016 IPR023214 HAD-like domain CLI_RS10510 404a9601609809a139f3662c73378b04 623 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 312 318 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CLI_RS10510 404a9601609809a139f3662c73378b04 623 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 483 499 1.2E-6 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS10510 404a9601609809a139f3662c73378b04 623 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 543 568 1.2E-6 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS10510 404a9601609809a139f3662c73378b04 623 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 511 527 1.2E-6 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS10510 404a9601609809a139f3662c73378b04 623 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 69 613 1.8E-170 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CLI_RS10510 404a9601609809a139f3662c73378b04 623 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 468 6.5E-27 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 310 324 6.5E-27 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 511 530 6.5E-27 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 168 182 6.5E-27 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 547 6.5E-27 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 PANTHER PTHR24093 40 620 1.9E-152 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 Gene3D G3DSA:3.40.1110.10 332 443 9.1E-20 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS10510 404a9601609809a139f3662c73378b04 623 Gene3D G3DSA:3.40.50.1000 444 559 1.9E-38 T 23-04-2016 IPR023214 HAD-like domain CLI_RS10510 404a9601609809a139f3662c73378b04 623 Gene3D G3DSA:3.40.50.1000 294 324 1.9E-38 T 23-04-2016 IPR023214 HAD-like domain CLI_RS10510 404a9601609809a139f3662c73378b04 623 PANTHER PTHR24093:SF50 40 620 1.9E-152 T 23-04-2016 CLI_RS10510 404a9601609809a139f3662c73378b04 623 Pfam PF00122 E1-E2 ATPase 92 301 9.5E-59 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS10510 404a9601609809a139f3662c73378b04 623 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 92 591 6.5E-78 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS02830 1c2dd96e4536f5d2f7f084d2b97f814e 279 SUPERFAMILY SSF56281 144 259 7.47E-28 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02830 1c2dd96e4536f5d2f7f084d2b97f814e 279 SUPERFAMILY SSF56281 11 106 7.47E-28 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02830 1c2dd96e4536f5d2f7f084d2b97f814e 279 PANTHER PTHR13754:SF13 2 279 3.2E-92 T 23-04-2016 CLI_RS02830 1c2dd96e4536f5d2f7f084d2b97f814e 279 PANTHER PTHR13754 2 279 3.2E-92 T 23-04-2016 CLI_RS02830 1c2dd96e4536f5d2f7f084d2b97f814e 279 Gene3D G3DSA:3.60.15.10 19 137 5.5E-25 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02830 1c2dd96e4536f5d2f7f084d2b97f814e 279 Gene3D G3DSA:3.60.15.10 174 264 5.5E-25 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02830 1c2dd96e4536f5d2f7f084d2b97f814e 279 Pfam PF00753 Metallo-beta-lactamase superfamily 24 85 2.9E-9 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS17175 b3d1ca528a3a9421d140212e78425fe6 361 SUPERFAMILY SSF50891 246 359 1.37E-37 T 23-04-2016 IPR029000 Cyclophilin-like domain CLI_RS17175 b3d1ca528a3a9421d140212e78425fe6 361 Gene3D G3DSA:2.40.100.10 244 359 9.1E-46 T 23-04-2016 IPR029000 Cyclophilin-like domain CLI_RS17175 b3d1ca528a3a9421d140212e78425fe6 361 PANTHER PTHR38435 2 361 2.4E-230 T 23-04-2016 CLI_RS17175 b3d1ca528a3a9421d140212e78425fe6 361 Gene3D G3DSA:3.20.20.70 1 241 2.4E-100 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS17175 b3d1ca528a3a9421d140212e78425fe6 361 SUPERFAMILY SSF51445 1 243 3.9E-91 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS17175 b3d1ca528a3a9421d140212e78425fe6 361 Pfam PF05913 Bacterial protein of unknown function (DUF871) 3 359 9.3E-144 T 23-04-2016 IPR008589 Protein of unknown function DUF871, prokaryotic CLI_RS17175 b3d1ca528a3a9421d140212e78425fe6 361 PANTHER PTHR38435:SF1 2 361 2.4E-230 T 23-04-2016 CLI_RS02790 8a8ed35bedd228d9e67c031b708d7f87 206 SUPERFAMILY SSF46785 4 83 2.06E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02790 8a8ed35bedd228d9e67c031b708d7f87 206 PANTHER PTHR30445 1 203 1.6E-45 T 23-04-2016 CLI_RS02790 8a8ed35bedd228d9e67c031b708d7f87 206 SMART SM00345 12 71 3.4E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS02790 8a8ed35bedd228d9e67c031b708d7f87 206 Gene3D G3DSA:1.10.10.10 2 75 1.7E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02790 8a8ed35bedd228d9e67c031b708d7f87 206 Gene3D G3DSA:3.30.70.1450 131 204 1.9E-21 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS02790 8a8ed35bedd228d9e67c031b708d7f87 206 PANTHER PTHR30445:SF3 1 203 1.6E-45 T 23-04-2016 CLI_RS02790 8a8ed35bedd228d9e67c031b708d7f87 206 Pfam PF02080 TrkA-C domain 133 203 1.4E-16 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS02790 8a8ed35bedd228d9e67c031b708d7f87 206 SUPERFAMILY SSF116726 123 203 4.05E-18 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS02790 8a8ed35bedd228d9e67c031b708d7f87 206 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 2.8E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS15725 2c1c7ee1b9f8f4e1cce8891f63865d59 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 473 1.9E-79 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain CLI_RS15725 2c1c7ee1b9f8f4e1cce8891f63865d59 560 PANTHER PTHR30290:SF10 1 549 2.1E-189 T 23-04-2016 CLI_RS15725 2c1c7ee1b9f8f4e1cce8891f63865d59 560 SUPERFAMILY SSF53850 392 551 5.7E-116 T 23-04-2016 CLI_RS15725 2c1c7ee1b9f8f4e1cce8891f63865d59 560 SUPERFAMILY SSF53850 35 364 5.7E-116 T 23-04-2016 CLI_RS15725 2c1c7ee1b9f8f4e1cce8891f63865d59 560 Gene3D G3DSA:3.40.190.10 220 318 9.5E-27 T 23-04-2016 CLI_RS15725 2c1c7ee1b9f8f4e1cce8891f63865d59 560 Gene3D G3DSA:3.90.76.10 49 219 1.8E-49 T 23-04-2016 CLI_RS15725 2c1c7ee1b9f8f4e1cce8891f63865d59 560 Gene3D G3DSA:3.10.105.10 319 527 6.2E-47 T 23-04-2016 CLI_RS15725 2c1c7ee1b9f8f4e1cce8891f63865d59 560 PIRSF PIRSF002741 2 557 7.7E-98 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLI_RS15725 2c1c7ee1b9f8f4e1cce8891f63865d59 560 PANTHER PTHR30290 1 549 2.1E-189 T 23-04-2016 CLI_RS18240 9e99ffb4b35314b40d6f2b0a79d1a78b 189 Pfam PF01195 Peptidyl-tRNA hydrolase 3 182 2.4E-60 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLI_RS18240 9e99ffb4b35314b40d6f2b0a79d1a78b 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 176 36.196 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLI_RS18240 9e99ffb4b35314b40d6f2b0a79d1a78b 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CLI_RS18240 9e99ffb4b35314b40d6f2b0a79d1a78b 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 183 3.7E-64 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLI_RS18240 9e99ffb4b35314b40d6f2b0a79d1a78b 189 SUPERFAMILY SSF53178 1 183 4.32E-67 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLI_RS18240 9e99ffb4b35314b40d6f2b0a79d1a78b 189 Gene3D G3DSA:3.40.50.1470 1 184 4.4E-75 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLI_RS18240 9e99ffb4b35314b40d6f2b0a79d1a78b 189 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CLI_RS18240 9e99ffb4b35314b40d6f2b0a79d1a78b 189 PANTHER PTHR17224 1 186 3.9E-82 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLI_RS12860 abd159744eee7f0311e993322d47c0d8 416 Gene3D G3DSA:1.20.272.10 231 327 1.7E-36 T 23-04-2016 CLI_RS12860 abd159744eee7f0311e993322d47c0d8 416 Gene3D G3DSA:1.10.8.60 142 206 5.3E-10 T 23-04-2016 CLI_RS12860 abd159744eee7f0311e993322d47c0d8 416 PANTHER PTHR13779 2 414 1.5E-138 T 23-04-2016 CLI_RS12860 abd159744eee7f0311e993322d47c0d8 416 Gene3D G3DSA:3.40.50.300 2 141 6.0E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12860 abd159744eee7f0311e993322d47c0d8 416 Pfam PF16193 AAA C-terminal domain 174 248 1.8E-18 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain CLI_RS12860 abd159744eee7f0311e993322d47c0d8 416 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 151 7.7E-15 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS12860 abd159744eee7f0311e993322d47c0d8 416 SUPERFAMILY SSF48019 234 415 2.04E-65 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 CLI_RS12860 abd159744eee7f0311e993322d47c0d8 416 PANTHER PTHR13779:SF7 2 414 1.5E-138 T 23-04-2016 CLI_RS12860 abd159744eee7f0311e993322d47c0d8 416 Pfam PF12002 MgsA AAA+ ATPase C terminal 249 413 5.9E-62 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal CLI_RS12860 abd159744eee7f0311e993322d47c0d8 416 SUPERFAMILY SSF52540 2 219 2.32E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12860 abd159744eee7f0311e993322d47c0d8 416 Gene3D G3DSA:1.10.3710.10 329 414 5.6E-24 T 23-04-2016 CLI_RS12860 abd159744eee7f0311e993322d47c0d8 416 SMART SM00382 37 152 7.8E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 SUPERFAMILY SSF82051 2 157 4.58E-56 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 3.7E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 3.7E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 3.7E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 3.7E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 SUPERFAMILY SSF52540 149 337 1.44E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 325 4.8E-13 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 330 1.6E-142 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 PIRSF PIRSF002401 1 372 1.2E-139 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 Pfam PF09269 Domain of unknown function (DUF1967) 356 422 1.4E-21 T 23-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 SUPERFAMILY SSF102741 357 422 1.83E-18 T 23-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 Pfam PF01926 50S ribosome-binding GTPase 160 283 1.6E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 Gene3D G3DSA:2.70.210.12 2 155 4.4E-58 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 Hamap MF_01454 GTPase Obg [obg]. 1 331 47.478 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 PANTHER PTHR11702:SF3 2 339 9.9E-159 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 PANTHER PTHR11702:SF3 411 421 9.9E-159 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 Pfam PF01018 GTP1/OBG 2 157 2.2E-62 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 PANTHER PTHR11702 2 339 9.9E-159 T 23-04-2016 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 PANTHER PTHR11702 411 421 9.9E-159 T 23-04-2016 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 357 422 1.3E-22 T 23-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 CLI_RS14855 ef3dbd55594a5e92f0e73f928c5f9bbb 424 Gene3D G3DSA:3.40.50.300 159 331 5.7E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07365 a038724f657e71aa137ea272b51ac812 670 Gene3D G3DSA:3.40.50.300 7 260 1.0E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07365 a038724f657e71aa137ea272b51ac812 670 PANTHER PTHR11070:SF7 7 616 5.5E-144 T 23-04-2016 CLI_RS07365 a038724f657e71aa137ea272b51ac812 670 Gene3D G3DSA:3.40.50.300 526 606 3.9E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07365 a038724f657e71aa137ea272b51ac812 670 Gene3D G3DSA:3.40.50.300 268 378 3.9E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07365 a038724f657e71aa137ea272b51ac812 670 Pfam PF13361 UvrD-like helicase C-terminal domain 264 587 7.8E-48 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CLI_RS07365 a038724f657e71aa137ea272b51ac812 670 SUPERFAMILY SSF52540 6 596 3.66E-128 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07365 a038724f657e71aa137ea272b51ac812 670 PANTHER PTHR11070 7 616 5.5E-144 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS07365 a038724f657e71aa137ea272b51ac812 670 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 119 2.0E-23 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CLI_RS07365 a038724f657e71aa137ea272b51ac812 670 Pfam PF00580 UvrD/REP helicase N-terminal domain 154 258 6.5E-30 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CLI_RS07365 a038724f657e71aa137ea272b51ac812 670 Gene3D G3DSA:1.10.486.10 379 508 1.7E-15 T 23-04-2016 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 PANTHER PTHR19375:SF173 2 623 0.0 T 23-04-2016 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 Pfam PF00012 Hsp70 protein 83 576 2.5E-221 T 23-04-2016 IPR013126 Heat shock protein 70 family CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 Pfam PF00012 Hsp70 protein 4 78 1.7E-30 T 23-04-2016 IPR013126 Heat shock protein 70 family CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 SUPERFAMILY SSF53067 2 159 1.08E-59 T 23-04-2016 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 PANTHER PTHR19375 2 623 0.0 T 23-04-2016 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 Gene3D G3DSA:1.20.1270.10 504 575 3.6E-26 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 SUPERFAMILY SSF100920 356 512 1.27E-60 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 Gene3D G3DSA:3.30.420.40 101 166 1.5E-59 T 23-04-2016 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 Gene3D G3DSA:3.30.420.40 3 38 1.5E-59 T 23-04-2016 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 PRINTS PR00301 70kDa heat shock protein signature 114 134 5.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 PRINTS PR00301 70kDa heat shock protein signature 174 184 5.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 PRINTS PR00301 70kDa heat shock protein signature 54 62 5.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 PRINTS PR00301 70kDa heat shock protein signature 306 322 5.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 PRINTS PR00301 70kDa heat shock protein signature 337 357 5.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 PRINTS PR00301 70kDa heat shock protein signature 360 379 5.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 PRINTS PR00301 70kDa heat shock protein signature 441 457 5.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 Gene3D G3DSA:3.90.640.10 202 287 1.2E-32 T 23-04-2016 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 SUPERFAMILY SSF100934 479 577 5.49E-14 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 SUPERFAMILY SSF53067 163 354 9.86E-68 T 23-04-2016 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 Gene3D G3DSA:2.60.34.10 362 503 1.4E-68 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 Gene3D G3DSA:3.30.420.40 167 201 7.5E-34 T 23-04-2016 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 Gene3D G3DSA:3.30.420.40 291 332 7.5E-34 T 23-04-2016 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 576 3.2E-289 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 Gene3D G3DSA:3.30.30.30 39 100 1.6E-18 T 23-04-2016 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 620 37.267 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 CLI_RS14725 3b6a59d4692d8193acbad584f05f8c10 623 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CLI_RS05090 b49603c16ccab6980ed6e1e6b38f88da 295 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS05090 b49603c16ccab6980ed6e1e6b38f88da 295 SUPERFAMILY SSF52540 4 218 8.91E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05090 b49603c16ccab6980ed6e1e6b38f88da 295 PANTHER PTHR24220 5 228 1.9E-136 T 23-04-2016 CLI_RS05090 b49603c16ccab6980ed6e1e6b38f88da 295 Gene3D G3DSA:3.40.50.300 3 225 1.1E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05090 b49603c16ccab6980ed6e1e6b38f88da 295 PANTHER PTHR24220:SF331 5 228 1.9E-136 T 23-04-2016 CLI_RS05090 b49603c16ccab6980ed6e1e6b38f88da 295 Pfam PF00005 ABC transporter 21 162 5.0E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS05090 b49603c16ccab6980ed6e1e6b38f88da 295 SMART SM00382 27 209 2.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03640 5ab296318cfed6197fd457afc0ad2708 412 PANTHER PTHR33712:SF2 3 412 4.9E-162 T 23-04-2016 CLI_RS03640 5ab296318cfed6197fd457afc0ad2708 412 PANTHER PTHR33712 3 412 4.9E-162 T 23-04-2016 CLI_RS03640 5ab296318cfed6197fd457afc0ad2708 412 Gene3D G3DSA:3.40.50.1980 14 151 1.0E-18 T 23-04-2016 CLI_RS03640 5ab296318cfed6197fd457afc0ad2708 412 SUPERFAMILY SSF53807 10 410 4.25E-62 T 23-04-2016 CLI_RS03640 5ab296318cfed6197fd457afc0ad2708 412 Gene3D G3DSA:3.40.50.1980 152 257 5.7E-19 T 23-04-2016 CLI_RS03640 5ab296318cfed6197fd457afc0ad2708 412 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 14 406 7.9E-50 T 23-04-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CLI_RS08430 0abde60ae8e73df974f6f1eef3d0bf7c 295 Gene3D G3DSA:2.40.30.10 2 91 3.5E-26 T 23-04-2016 CLI_RS08430 0abde60ae8e73df974f6f1eef3d0bf7c 295 PIRSF PIRSF006816 1 262 1.1E-63 T 23-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 CLI_RS08430 0abde60ae8e73df974f6f1eef3d0bf7c 295 PANTHER PTHR11938 54 261 3.9E-65 T 23-04-2016 CLI_RS08430 0abde60ae8e73df974f6f1eef3d0bf7c 295 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 220 256 1.7E-12 T 23-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 CLI_RS08430 0abde60ae8e73df974f6f1eef3d0bf7c 295 Gene3D G3DSA:2.10.240.10 225 255 5.6E-5 T 23-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 CLI_RS08430 0abde60ae8e73df974f6f1eef3d0bf7c 295 SUPERFAMILY SSF63380 2 91 5.21E-21 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLI_RS08430 0abde60ae8e73df974f6f1eef3d0bf7c 295 Gene3D G3DSA:3.40.50.80 103 217 5.0E-34 T 23-04-2016 CLI_RS08430 0abde60ae8e73df974f6f1eef3d0bf7c 295 SUPERFAMILY SSF52343 104 255 1.7E-31 T 23-04-2016 CLI_RS08430 0abde60ae8e73df974f6f1eef3d0bf7c 295 PANTHER PTHR11938:SF47 54 261 3.9E-65 T 23-04-2016 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 Gene3D G3DSA:3.50.50.60 242 309 7.8E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 Gene3D G3DSA:3.50.50.60 7 121 7.8E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 SUPERFAMILY SSF51905 3 305 1.13E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 306 2.1E-107 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PANTHER PTHR22912:SF48 1 309 1.8E-130 T 23-04-2016 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 Gene3D G3DSA:3.50.50.60 122 241 1.1E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PANTHER PTHR22912 1 309 1.8E-130 T 23-04-2016 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 295 1.2E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 1.4E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 42 57 1.4E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 1.4E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 1.4E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 1.4E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 256 1.4E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.4E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 287 1.4E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 1.4E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.0E-36 T 23-04-2016 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.0E-36 T 23-04-2016 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 1.0E-36 T 23-04-2016 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.0E-36 T 23-04-2016 CLI_RS06505 92fcdd294bdef93bf988fca1cb9fce2d 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.0E-36 T 23-04-2016 CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 Pfam PF07702 UTRA domain 97 237 2.2E-31 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 PANTHER PTHR11751:SF333 126 149 1.1E-43 T 23-04-2016 CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 PANTHER PTHR11751:SF333 10 78 1.1E-43 T 23-04-2016 CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.9E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.9E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 SMART SM00345 16 75 1.1E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 SMART SM00866 96 237 1.4E-31 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 PANTHER PTHR11751 126 149 1.1E-43 T 23-04-2016 CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 PANTHER PTHR11751 10 78 1.1E-43 T 23-04-2016 CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 SUPERFAMILY SSF64288 63 242 5.02E-45 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 SUPERFAMILY SSF46785 5 84 1.64E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 Gene3D G3DSA:1.10.10.10 5 72 2.5E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 Gene3D G3DSA:3.40.1410.10 73 242 4.5E-51 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLI_RS14100 9e1a5a601846d682b1a1630018fa97a9 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 1.1E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS16730 461072cfd9dc829fd5b0a5641455c11d 403 PANTHER PTHR11958:SF44 99 401 6.9E-67 T 23-04-2016 CLI_RS16730 461072cfd9dc829fd5b0a5641455c11d 403 Pfam PF00375 Sodium:dicarboxylate symporter family 6 381 1.3E-70 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS16730 461072cfd9dc829fd5b0a5641455c11d 403 SUPERFAMILY SSF118215 6 381 2.88E-77 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS16730 461072cfd9dc829fd5b0a5641455c11d 403 Gene3D G3DSA:1.10.3860.10 1 386 3.5E-58 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS16730 461072cfd9dc829fd5b0a5641455c11d 403 PANTHER PTHR11958 99 401 6.9E-67 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS16730 461072cfd9dc829fd5b0a5641455c11d 403 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 3.9E-7 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS16730 461072cfd9dc829fd5b0a5641455c11d 403 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 3.9E-7 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS16730 461072cfd9dc829fd5b0a5641455c11d 403 PRINTS PR00173 Glutamate-aspartate symporter signature 273 299 3.9E-7 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS16730 461072cfd9dc829fd5b0a5641455c11d 403 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 3.9E-7 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS04610 13b73361b96de459ec46c7d42189ba66 478 PANTHER PTHR11751 99 478 3.1E-138 T 23-04-2016 CLI_RS04610 13b73361b96de459ec46c7d42189ba66 478 Pfam PF00155 Aminotransferase class I and II 129 443 1.0E-21 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS04610 13b73361b96de459ec46c7d42189ba66 478 Gene3D G3DSA:1.10.10.10 6 79 1.4E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04610 13b73361b96de459ec46c7d42189ba66 478 SUPERFAMILY SSF53383 105 477 3.4E-71 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS04610 13b73361b96de459ec46c7d42189ba66 478 SUPERFAMILY SSF46785 12 82 2.72E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04610 13b73361b96de459ec46c7d42189ba66 478 Gene3D G3DSA:3.40.640.10 150 367 5.7E-45 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS04610 13b73361b96de459ec46c7d42189ba66 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 78 1.4E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS04610 13b73361b96de459ec46c7d42189ba66 478 PANTHER PTHR11751:SF10 99 478 3.1E-138 T 23-04-2016 CLI_RS04610 13b73361b96de459ec46c7d42189ba66 478 SMART SM00345 19 78 1.2E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 PANTHER PTHR11911:SF23 104 410 2.5E-54 T 23-04-2016 CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 PANTHER PTHR11911 104 410 2.5E-54 T 23-04-2016 CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 Gene3D G3DSA:1.10.357.20 270 443 1.3E-59 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 Pfam PF01769 Divalent cation transporter 313 436 5.9E-32 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 Gene3D G3DSA:3.10.580.10 118 255 9.9E-26 T 23-04-2016 CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 SUPERFAMILY SSF158791 2 124 4.58E-27 T 23-04-2016 CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 TIGRFAM TIGR00400 mgtE: magnesium transporter 4 444 5.0E-158 T 23-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 Gene3D G3DSA:1.25.60.10 2 117 1.6E-26 T 23-04-2016 CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 Pfam PF03448 MgtE intracellular N domain 23 125 2.1E-28 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 SMART SM00116 198 246 2.2E-5 T 23-04-2016 IPR000644 CBS domain CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 SMART SM00116 134 187 8.4 T 23-04-2016 IPR000644 CBS domain CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 Pfam PF00571 CBS domain 191 245 2.9E-8 T 23-04-2016 IPR000644 CBS domain CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 Pfam PF00571 CBS domain 127 183 1.9E-7 T 23-04-2016 IPR000644 CBS domain CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 SUPERFAMILY SSF54631 127 266 3.03E-32 T 23-04-2016 CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 SUPERFAMILY SSF161093 270 442 7.06E-53 T 23-04-2016 CLI_RS05880 5189b92c2f865410b72cb50bf49d97ce 444 SMART SM00924 23 127 1.6E-32 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain CLI_RS17495 6d0abb9b62c46b1b5d60fc10a3c31131 215 SUPERFAMILY SSF56784 1 187 5.24E-50 T 23-04-2016 IPR023214 HAD-like domain CLI_RS17495 6d0abb9b62c46b1b5d60fc10a3c31131 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 63 183 1.4E-12 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS17495 6d0abb9b62c46b1b5d60fc10a3c31131 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 95 178 6.8E-6 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS17495 6d0abb9b62c46b1b5d60fc10a3c31131 215 PANTHER PTHR18901:SF34 2 213 2.2E-78 T 23-04-2016 CLI_RS17495 6d0abb9b62c46b1b5d60fc10a3c31131 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 8.2E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS17495 6d0abb9b62c46b1b5d60fc10a3c31131 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 8.2E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS17495 6d0abb9b62c46b1b5d60fc10a3c31131 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 8.2E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS17495 6d0abb9b62c46b1b5d60fc10a3c31131 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 8.2E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS17495 6d0abb9b62c46b1b5d60fc10a3c31131 215 Gene3D G3DSA:3.40.50.1000 62 190 3.7E-37 T 23-04-2016 IPR023214 HAD-like domain CLI_RS17495 6d0abb9b62c46b1b5d60fc10a3c31131 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 4.6E-44 T 23-04-2016 IPR023214 HAD-like domain CLI_RS17495 6d0abb9b62c46b1b5d60fc10a3c31131 215 PANTHER PTHR18901 2 213 2.2E-78 T 23-04-2016 CLI_RS02660 ac136a282347b96c7bc9617e22cd727c 318 PANTHER PTHR23026:SF61 172 311 8.1E-58 T 23-04-2016 CLI_RS02660 ac136a282347b96c7bc9617e22cd727c 318 PANTHER PTHR23026:SF61 97 150 8.1E-58 T 23-04-2016 CLI_RS02660 ac136a282347b96c7bc9617e22cd727c 318 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 139 314 2.0E-60 T 23-04-2016 IPR020051 SagB-type dehydrogenase domain CLI_RS02660 ac136a282347b96c7bc9617e22cd727c 318 Pfam PF00881 Nitroreductase family 124 314 1.8E-26 T 23-04-2016 IPR029479 Nitroreductase CLI_RS02660 ac136a282347b96c7bc9617e22cd727c 318 PANTHER PTHR23026 172 311 8.1E-58 T 23-04-2016 CLI_RS02660 ac136a282347b96c7bc9617e22cd727c 318 PANTHER PTHR23026 97 150 8.1E-58 T 23-04-2016 CLI_RS02660 ac136a282347b96c7bc9617e22cd727c 318 SUPERFAMILY SSF55469 121 315 3.93E-22 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS02660 ac136a282347b96c7bc9617e22cd727c 318 Gene3D G3DSA:3.40.109.10 120 317 1.8E-32 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS14215 5b26fae5d600702348b3010bc5352591 344 PANTHER PTHR30544:SF5 9 343 2.0E-153 T 23-04-2016 CLI_RS14215 5b26fae5d600702348b3010bc5352591 344 Pfam PF04055 Radical SAM superfamily 106 265 1.3E-11 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS14215 5b26fae5d600702348b3010bc5352591 344 TIGRFAM TIGR04432 rSAM_Cfr: 23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr 4 340 1.5E-187 T 23-04-2016 IPR022881 Ribosomal RNA large subunit methyltransferase, Cfr GO:0070475 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6828 CLI_RS14215 5b26fae5d600702348b3010bc5352591 344 PIRSF PIRSF006004 2 343 2.7E-99 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS14215 5b26fae5d600702348b3010bc5352591 344 Hamap MF_01873 Ribosomal RNA large subunit methyltransferase Cfr [cfr]. 2 344 66.087 T 23-04-2016 IPR022881 Ribosomal RNA large subunit methyltransferase, Cfr GO:0070475 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6828 CLI_RS14215 5b26fae5d600702348b3010bc5352591 344 Gene3D G3DSA:3.80.30.10 150 323 7.2E-5 T 23-04-2016 CLI_RS14215 5b26fae5d600702348b3010bc5352591 344 PANTHER PTHR30544 9 343 2.0E-153 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS14215 5b26fae5d600702348b3010bc5352591 344 SUPERFAMILY SSF102114 105 310 1.44E-9 T 23-04-2016 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 Gene3D G3DSA:3.40.50.620 226 334 3.9E-77 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 Gene3D G3DSA:3.40.50.620 3 114 3.9E-77 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 Pfam PF01588 Putative tRNA binding domain 549 641 1.8E-29 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 Gene3D G3DSA:2.170.220.10 117 225 5.0E-47 T 23-04-2016 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 Gene3D G3DSA:2.40.50.140 534 644 6.1E-42 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 224 235 3.0E-34 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 3.0E-34 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 3.0E-34 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 349 360 3.0E-34 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 3.0E-34 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 257 272 3.0E-34 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 24 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 Gene3D G3DSA:1.10.730.10 339 507 1.1E-52 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 SUPERFAMILY SSF52374 3 348 2.82E-118 T 23-04-2016 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 SUPERFAMILY SSF47323 351 557 1.44E-45 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 PANTHER PTHR11946:SF1 2 599 0.0 T 23-04-2016 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 Pfam PF09334 tRNA synthetases class I (M) 6 361 5.2E-117 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 511 644 9.2E-46 T 23-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 506 50.726 T 23-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 SUPERFAMILY SSF50249 542 642 1.15E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 Pfam PF08264 Anticodon-binding domain of tRNA 385 537 1.0E-7 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 508 2.7E-176 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CLI_RS00510 e198e24b32ff444d5e561cb549cbe805 645 PANTHER PTHR11946 2 599 0.0 T 23-04-2016 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 SUPERFAMILY SSF47648 1 69 2.09E-21 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 23-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 Gene3D G3DSA:3.40.1030.10 70 333 4.7E-112 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 418 7.9E-23 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 SMART SM00941 345 419 1.1E-26 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 PIRSF PIRSF000478 1 433 3.9E-161 T 23-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 SUPERFAMILY SSF52418 69 329 7.33E-90 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 PANTHER PTHR10515:SF0 1 434 2.0E-223 T 23-04-2016 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 Gene3D G3DSA:3.90.1170.30 334 421 2.6E-27 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 1.2E-20 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 Gene3D G3DSA:1.20.970.10 1 67 6.5E-31 T 23-04-2016 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 Pfam PF00591 Glycosyl transferase family, a/b domain 78 305 4.2E-41 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 PANTHER PTHR10515 1 434 2.0E-223 T 23-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 418 4.0E-178 T 23-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 CLI_RS09140 a28461b182f0901229e6ba4664a3b261 434 SUPERFAMILY SSF54680 332 433 3.92E-27 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 Gene3D G3DSA:1.10.390.10 422 573 6.5E-50 T 23-04-2016 CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 Gene3D G3DSA:3.10.170.10 255 421 7.5E-48 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 85 133 1.6E-7 T 23-04-2016 IPR011096 FTP domain CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 256 417 7.9E-46 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 408 424 6.0E-20 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 429 440 6.0E-20 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 491 507 6.0E-20 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 370 390 6.0E-20 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 Pfam PF03413 Peptidase propeptide and YPEB domain 148 212 8.2E-9 T 23-04-2016 IPR025711 PepSY domain CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 PANTHER PTHR33794:SF1 2 580 4.6E-212 T 23-04-2016 CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 420 573 1.8E-50 T 23-04-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 SUPERFAMILY SSF55486 251 573 1.54E-78 T 23-04-2016 CLI_RS07455 f89c01ee6f319b0c966b05d82a307e7a 581 PANTHER PTHR33794 2 580 4.6E-212 T 23-04-2016 CLI_RS12640 c8820e00acf8a3251c7ed2aa17871253 295 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 14 293 1.3E-87 T 23-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CLI_RS12640 c8820e00acf8a3251c7ed2aa17871253 295 PANTHER PTHR30425:SF6 2 295 4.2E-157 T 23-04-2016 CLI_RS12640 c8820e00acf8a3251c7ed2aa17871253 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 293 1.7E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS12640 c8820e00acf8a3251c7ed2aa17871253 295 Gene3D G3DSA:1.10.3720.10 24 293 1.4E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS12640 c8820e00acf8a3251c7ed2aa17871253 295 PANTHER PTHR30425 2 295 4.2E-157 T 23-04-2016 CLI_RS12640 c8820e00acf8a3251c7ed2aa17871253 295 SUPERFAMILY SSF161098 27 285 5.01E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS08240 e720a4dec6ea570ae26df83648db5f81 552 Pfam PF00367 phosphotransferase system, EIIB 479 510 6.5E-13 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS08240 e720a4dec6ea570ae26df83648db5f81 552 Gene3D G3DSA:3.30.1360.60 475 551 1.2E-23 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS08240 e720a4dec6ea570ae26df83648db5f81 552 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 489 506 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS08240 e720a4dec6ea570ae26df83648db5f81 552 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 440 536 5.5E-15 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS08240 e720a4dec6ea570ae26df83648db5f81 552 Pfam PF02378 Phosphotransferase system, EIIC 16 379 6.6E-54 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS08240 e720a4dec6ea570ae26df83648db5f81 552 PANTHER PTHR30009 9 552 0.0 T 23-04-2016 CLI_RS08240 e720a4dec6ea570ae26df83648db5f81 552 TIGRFAM TIGR02003 PTS-II-BC-unk1: PTS system, IIBC component 5 551 6.8E-282 T 23-04-2016 IPR011300 Phosphotransferase system, IIBC component KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS08240 e720a4dec6ea570ae26df83648db5f81 552 SUPERFAMILY SSF55604 478 550 2.48E-17 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS08240 e720a4dec6ea570ae26df83648db5f81 552 PANTHER PTHR30009:SF8 9 552 0.0 T 23-04-2016 CLI_RS09840 15bd82d12cfc006a059e66165983ad73 230 Gene3D G3DSA:3.40.50.300 3 227 2.3E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09840 15bd82d12cfc006a059e66165983ad73 230 SUPERFAMILY SSF52540 3 221 1.33E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09840 15bd82d12cfc006a059e66165983ad73 230 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS09840 15bd82d12cfc006a059e66165983ad73 230 SMART SM00382 27 205 2.2E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS09840 15bd82d12cfc006a059e66165983ad73 230 Pfam PF00005 ABC transporter 23 157 1.6E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS09840 15bd82d12cfc006a059e66165983ad73 230 PANTHER PTHR24220 4 230 4.6E-72 T 23-04-2016 CLI_RS17890 a1fe669266555879e0f1a366143ebf5d 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 27.293 T 23-04-2016 IPR022973 Ribosomal protein L10 CLI_RS17890 a1fe669266555879e0f1a366143ebf5d 166 PANTHER PTHR11560 2 162 1.0E-56 T 23-04-2016 CLI_RS17890 a1fe669266555879e0f1a366143ebf5d 166 SUPERFAMILY SSF160369 4 160 7.98E-54 T 23-04-2016 CLI_RS17890 a1fe669266555879e0f1a366143ebf5d 166 Pfam PF00466 Ribosomal protein L10 3 101 5.6E-27 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CLI_RS17890 a1fe669266555879e0f1a366143ebf5d 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 19 141 9.0E-8 T 23-04-2016 CLI_RS11450 4f2b6cdb67cf3482879bf95923042df8 253 PANTHER PTHR23044:SF5 3 189 1.0E-67 T 23-04-2016 CLI_RS11450 4f2b6cdb67cf3482879bf95923042df8 253 SMART SM00479 2 183 1.5E-10 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS11450 4f2b6cdb67cf3482879bf95923042df8 253 Gene3D G3DSA:3.30.420.10 1 188 7.0E-43 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS11450 4f2b6cdb67cf3482879bf95923042df8 253 Pfam PF00929 Exonuclease 4 174 8.3E-15 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS11450 4f2b6cdb67cf3482879bf95923042df8 253 PANTHER PTHR23044 3 189 1.0E-67 T 23-04-2016 CLI_RS11450 4f2b6cdb67cf3482879bf95923042df8 253 SUPERFAMILY SSF53098 1 185 1.27E-28 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS07250 339d3531b2b553c2c23e47540450b6e7 629 PIRSF PIRSF018968 1 629 1.3E-119 T 23-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 CLI_RS07250 339d3531b2b553c2c23e47540450b6e7 629 PANTHER PTHR30489 1 621 1.5E-141 T 23-04-2016 CLI_RS07250 339d3531b2b553c2c23e47540450b6e7 629 Pfam PF02687 FtsX-like permease family 61 179 1.1E-13 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS07250 339d3531b2b553c2c23e47540450b6e7 629 PANTHER PTHR30489:SF14 1 621 1.5E-141 T 23-04-2016 CLI_RS00675 1eb2120b0585c8addb724b1e54e0136b 371 Pfam PF00534 Glycosyl transferases group 1 187 348 4.4E-34 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CLI_RS00675 1eb2120b0585c8addb724b1e54e0136b 371 Pfam PF13439 Glycosyltransferase Family 4 80 170 4.2E-8 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLI_RS00675 1eb2120b0585c8addb724b1e54e0136b 371 SUPERFAMILY SSF53756 46 370 3.54E-75 T 23-04-2016 CLI_RS00675 1eb2120b0585c8addb724b1e54e0136b 371 PANTHER PTHR12526 1 370 4.0E-73 T 23-04-2016 CLI_RS00675 1eb2120b0585c8addb724b1e54e0136b 371 Gene3D G3DSA:3.40.50.2000 157 348 1.9E-28 T 23-04-2016 CLI_RS00675 1eb2120b0585c8addb724b1e54e0136b 371 PANTHER PTHR12526:SF399 1 370 4.0E-73 T 23-04-2016 CLI_RS13540 d52ba6ff0747ed1ba083e92eeaf9b93f 363 Pfam PF15632 ATP-grasp in the biosynthetic pathway with Ter operon 12 333 2.1E-63 T 23-04-2016 IPR011226 ATP-grasp family CLI_RS13540 d52ba6ff0747ed1ba083e92eeaf9b93f 363 Gene3D G3DSA:3.40.50.20 5 119 6.4E-22 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS13540 d52ba6ff0747ed1ba083e92eeaf9b93f 363 SUPERFAMILY SSF56059 109 332 1.94E-24 T 23-04-2016 CLI_RS13540 d52ba6ff0747ed1ba083e92eeaf9b93f 363 Gene3D G3DSA:3.30.470.20 120 342 1.1E-21 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS01520 110e201b44f44461ee9f0ac65434a114 157 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 59 5.9E-6 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLI_RS01520 110e201b44f44461ee9f0ac65434a114 157 PANTHER PTHR11908 6 150 3.5E-43 T 23-04-2016 CLI_RS01520 110e201b44f44461ee9f0ac65434a114 157 Gene3D G3DSA:1.10.150.120 82 152 8.7E-31 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLI_RS01520 110e201b44f44461ee9f0ac65434a114 157 Gene3D G3DSA:3.10.20.30 7 81 1.6E-27 T 23-04-2016 IPR012675 Beta-grasp domain CLI_RS01520 110e201b44f44461ee9f0ac65434a114 157 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 46 54 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CLI_RS01520 110e201b44f44461ee9f0ac65434a114 157 SUPERFAMILY SSF47741 80 152 2.09E-30 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLI_RS01520 110e201b44f44461ee9f0ac65434a114 157 SUPERFAMILY SSF54292 6 93 3.67E-22 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLI_RS01520 110e201b44f44461ee9f0ac65434a114 157 PANTHER PTHR11908:SF66 6 150 3.5E-43 T 23-04-2016 CLI_RS01520 110e201b44f44461ee9f0ac65434a114 157 Pfam PF01799 [2Fe-2S] binding domain 80 149 8.8E-30 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLI_RS18310 04ddd09208d23afcdc10618689790944 239 Gene3D G3DSA:3.90.1560.10 8 236 1.2E-80 T 23-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 CLI_RS18310 04ddd09208d23afcdc10618689790944 239 PANTHER PTHR37311 1 235 1.3E-66 T 23-04-2016 CLI_RS18310 04ddd09208d23afcdc10618689790944 239 Pfam PF04029 2-phosphosulpholactate phosphatase 10 231 6.7E-82 T 23-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 CLI_RS18310 04ddd09208d23afcdc10618689790944 239 SUPERFAMILY SSF142823 1 234 4.58E-79 T 23-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 CLI_RS18310 04ddd09208d23afcdc10618689790944 239 PANTHER PTHR37311:SF1 1 235 1.3E-66 T 23-04-2016 CLI_RS18310 04ddd09208d23afcdc10618689790944 239 Hamap MF_00490 2-phosphosulfolactate phosphatase [comB]. 5 238 32.372 T 23-04-2016 IPR022995 Probable 2-phosphosulpholactate phosphatase GO:0019295|GO:0050532 KEGG: 00680+3.1.3.71 CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 Gene3D G3DSA:3.30.70.20 179 226 2.5E-14 T 23-04-2016 CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 PANTHER PTHR24960:SF20 138 261 4.8E-21 T 23-04-2016 CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 PANTHER PTHR24960 138 261 4.8E-21 T 23-04-2016 CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 Pfam PF00037 4Fe-4S binding domain 166 187 1.5E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 Pfam PF00037 4Fe-4S binding domain 239 261 3.2E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 SUPERFAMILY SSF46548 136 262 3.92E-17 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 Pfam PF04060 Putative Fe-S cluster 44 76 7.3E-14 T 23-04-2016 IPR007202 4Fe-4S domain GO:0051536 CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 96 1.4E-24 T 23-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 Gene3D G3DSA:3.30.70.20 227 261 3.5E-13 T 23-04-2016 CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 Gene3D G3DSA:3.30.70.20 136 178 2.4E-13 T 23-04-2016 CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 246 257 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS02070 ccec3d1166a5cc84dea21e6fece00a89 277 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 217 228 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 1.7E-144 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 SUPERFAMILY SSF52009 465 583 2.49E-25 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 Gene3D G3DSA:2.40.33.10 73 167 1.8E-32 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 470 4.4E-37 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 ProSitePatterns PS00110 Pyruvate kinase active site signature. 214 226 - T 23-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 PANTHER PTHR11817:SF3 1 584 7.3E-303 T 23-04-2016 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 PANTHER PTHR11817 1 584 7.3E-303 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 PRINTS PR01050 Pyruvate kinase family signature 268 292 2.8E-79 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 PRINTS PR01050 Pyruvate kinase family signature 185 199 2.8E-79 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 PRINTS PR01050 Pyruvate kinase family signature 312 328 2.8E-79 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 PRINTS PR01050 Pyruvate kinase family signature 243 267 2.8E-79 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 PRINTS PR01050 Pyruvate kinase family signature 293 311 2.8E-79 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 PRINTS PR01050 Pyruvate kinase family signature 216 242 2.8E-79 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.8E-79 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 Pfam PF00391 PEP-utilising enzyme, mobile domain 505 575 6.3E-16 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 SUPERFAMILY SSF51621 166 340 2.16E-99 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 SUPERFAMILY SSF51621 1 75 2.16E-99 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 Gene3D G3DSA:3.50.30.10 496 582 9.6E-21 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 SUPERFAMILY SSF50800 70 166 4.01E-28 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 Gene3D G3DSA:3.40.1380.20 325 472 2.5E-54 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 SUPERFAMILY SSF52935 322 473 4.71E-43 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 7.9E-187 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 Gene3D G3DSA:3.20.20.60 168 324 1.4E-110 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLI_RS17300 e7ff8ddee23e7ce55ad3d4115ed61030 585 Gene3D G3DSA:3.20.20.60 3 72 1.4E-110 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLI_RS04035 b9cf5d55fd4b593760b2940847b94a5b 105 SMART SM00418 10 88 7.7E-27 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS04035 b9cf5d55fd4b593760b2940847b94a5b 105 SUPERFAMILY SSF46785 4 87 3.56E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04035 b9cf5d55fd4b593760b2940847b94a5b 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 7.1E-20 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS04035 b9cf5d55fd4b593760b2940847b94a5b 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 7.1E-20 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS04035 b9cf5d55fd4b593760b2940847b94a5b 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 7.1E-20 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS04035 b9cf5d55fd4b593760b2940847b94a5b 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 31 42 7.1E-20 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS04035 b9cf5d55fd4b593760b2940847b94a5b 105 Gene3D G3DSA:1.10.10.10 4 92 1.7E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04035 b9cf5d55fd4b593760b2940847b94a5b 105 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 33 51 - T 23-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 CLI_RS04035 b9cf5d55fd4b593760b2940847b94a5b 105 PANTHER PTHR33154:SF3 4 100 5.6E-47 T 23-04-2016 CLI_RS04035 b9cf5d55fd4b593760b2940847b94a5b 105 PANTHER PTHR33154 4 100 5.6E-47 T 23-04-2016 CLI_RS04035 b9cf5d55fd4b593760b2940847b94a5b 105 Pfam PF01022 Bacterial regulatory protein, arsR family 18 63 4.4E-16 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS07995 84cf0e999f065aaa7fde24e32ad2309a 221 Gene3D G3DSA:3.20.20.70 16 207 2.8E-24 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS07995 84cf0e999f065aaa7fde24e32ad2309a 221 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 217 36.374 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 CLI_RS07995 84cf0e999f065aaa7fde24e32ad2309a 221 PIRSF PIRSF000370 1 220 4.6E-55 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 CLI_RS07995 84cf0e999f065aaa7fde24e32ad2309a 221 SUPERFAMILY SSF102114 17 203 7.72E-19 T 23-04-2016 CLI_RS07995 84cf0e999f065aaa7fde24e32ad2309a 221 Pfam PF04055 Radical SAM superfamily 27 195 5.7E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS07995 84cf0e999f065aaa7fde24e32ad2309a 221 PANTHER PTHR11228 1 215 7.2E-50 T 23-04-2016 CLI_RS07995 84cf0e999f065aaa7fde24e32ad2309a 221 PANTHER PTHR11228:SF6 1 215 7.2E-50 T 23-04-2016 CLI_RS07995 84cf0e999f065aaa7fde24e32ad2309a 221 TIGRFAM TIGR03963 rSAM_QueE_Clost: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 3 221 2.5E-112 T 23-04-2016 IPR023868 7-carboxy-7-deazaguanine synthase, Clostridial form KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 CLI_RS07995 84cf0e999f065aaa7fde24e32ad2309a 221 Pfam PF13353 4Fe-4S single cluster domain 12 108 2.0E-14 T 23-04-2016 CLI_RS10215 080544e64feb68d68bd43dcae14938a3 379 Gene3D G3DSA:3.90.1150.10 263 364 1.2E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS10215 080544e64feb68d68bd43dcae14938a3 379 SUPERFAMILY SSF53383 2 363 2.48E-86 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS10215 080544e64feb68d68bd43dcae14938a3 379 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 182 202 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLI_RS10215 080544e64feb68d68bd43dcae14938a3 379 PIRSF PIRSF000524 1 378 2.1E-95 T 23-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CLI_RS10215 080544e64feb68d68bd43dcae14938a3 379 Pfam PF00266 Aminotransferase class-V 29 323 1.3E-31 T 23-04-2016 IPR000192 Aminotransferase class V domain CLI_RS10215 080544e64feb68d68bd43dcae14938a3 379 PANTHER PTHR21152 4 366 1.1E-114 T 23-04-2016 CLI_RS10215 080544e64feb68d68bd43dcae14938a3 379 Gene3D G3DSA:3.40.640.10 31 258 8.6E-50 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS10215 080544e64feb68d68bd43dcae14938a3 379 PANTHER PTHR21152:SF21 4 366 1.1E-114 T 23-04-2016 CLI_RS03325 82ad2984ed56e7e5e52ff7ed52c2094d 208 SMART SM01059 1 201 3.2E-99 T 23-04-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CLI_RS03325 82ad2984ed56e7e5e52ff7ed52c2094d 208 PIRSF PIRSF000440 1 208 5.7E-63 T 23-04-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CLI_RS03325 82ad2984ed56e7e5e52ff7ed52c2094d 208 PANTHER PTHR38474:SF1 1 207 8.1E-114 T 23-04-2016 CLI_RS03325 82ad2984ed56e7e5e52ff7ed52c2094d 208 Pfam PF00302 Chloramphenicol acetyltransferase 2 201 1.9E-44 T 23-04-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CLI_RS03325 82ad2984ed56e7e5e52ff7ed52c2094d 208 Gene3D G3DSA:3.30.559.10 1 205 1.3E-69 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain CLI_RS03325 82ad2984ed56e7e5e52ff7ed52c2094d 208 SUPERFAMILY SSF52777 2 207 3.56E-56 T 23-04-2016 CLI_RS03325 82ad2984ed56e7e5e52ff7ed52c2094d 208 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 11 200 2.0E-75 T 23-04-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CLI_RS03325 82ad2984ed56e7e5e52ff7ed52c2094d 208 PANTHER PTHR38474 1 207 8.1E-114 T 23-04-2016 CLI_RS00835 e4ce0067574001e132a57be0cc781af2 358 SMART SM00937 63 177 8.4E-69 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CLI_RS00835 e4ce0067574001e132a57be0cc781af2 358 Pfam PF03462 PCRF domain 8 202 2.4E-78 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CLI_RS00835 e4ce0067574001e132a57be0cc781af2 358 PANTHER PTHR11075 1 354 1.8E-183 T 23-04-2016 CLI_RS00835 e4ce0067574001e132a57be0cc781af2 358 Gene3D G3DSA:1.20.58.410 8 92 9.0E-23 T 23-04-2016 CLI_RS00835 e4ce0067574001e132a57be0cc781af2 358 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLI_RS00835 e4ce0067574001e132a57be0cc781af2 358 Gene3D G3DSA:3.30.160.20 209 286 1.4E-34 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CLI_RS00835 e4ce0067574001e132a57be0cc781af2 358 PANTHER PTHR11075:SF9 1 354 1.8E-183 T 23-04-2016 CLI_RS00835 e4ce0067574001e132a57be0cc781af2 358 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 41.533 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CLI_RS00835 e4ce0067574001e132a57be0cc781af2 358 Pfam PF00472 RF-1 domain 210 319 3.3E-42 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLI_RS00835 e4ce0067574001e132a57be0cc781af2 358 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 353 9.4E-171 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CLI_RS00835 e4ce0067574001e132a57be0cc781af2 358 SUPERFAMILY SSF75620 8 351 4.71E-141 T 23-04-2016 CLI_RS10225 53915c5e430bf476c71d3a02c5c94ccc 70 Pfam PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) 8 69 3.2E-32 T 23-04-2016 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon CLI_RS10225 53915c5e430bf476c71d3a02c5c94ccc 70 Gene3D G3DSA:2.20.28.30 38 58 9.9E-4 T 23-04-2016 IPR006591 RNA polymerase archaeal subunit P/eukaryotic subunit RPABC4 GO:0003677|GO:0003899|GO:0006351 CLI_RS10085 37fbe6ed593a66c58846f0da7953ea33 286 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 4 285 3.3E-149 T 23-04-2016 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 CLI_RS10085 37fbe6ed593a66c58846f0da7953ea33 286 Gene3D G3DSA:3.20.20.70 5 286 5.2E-115 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS10085 37fbe6ed593a66c58846f0da7953ea33 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 6 285 5.9E-105 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLI_RS10085 37fbe6ed593a66c58846f0da7953ea33 286 PANTHER PTHR30304 4 286 3.2E-162 T 23-04-2016 CLI_RS10085 37fbe6ed593a66c58846f0da7953ea33 286 PIRSF PIRSF001359 3 286 2.9E-117 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLI_RS10085 37fbe6ed593a66c58846f0da7953ea33 286 PANTHER PTHR30304:SF5 4 286 3.2E-162 T 23-04-2016 CLI_RS10085 37fbe6ed593a66c58846f0da7953ea33 286 SUPERFAMILY SSF51569 4 285 2.05E-104 T 23-04-2016 CLI_RS10085 37fbe6ed593a66c58846f0da7953ea33 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 285 5.3E-106 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLI_RS10085 37fbe6ed593a66c58846f0da7953ea33 286 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 133 144 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLI_RS14125 de73f1f83232299988281b01629e7a30 480 Pfam PF00367 phosphotransferase system, EIIB 406 439 3.5E-11 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS14125 de73f1f83232299988281b01629e7a30 480 Pfam PF02378 Phosphotransferase system, EIIC 15 312 4.7E-77 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS14125 de73f1f83232299988281b01629e7a30 480 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 417 434 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS14125 de73f1f83232299988281b01629e7a30 480 Gene3D G3DSA:3.30.1360.60 400 479 2.8E-22 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS14125 de73f1f83232299988281b01629e7a30 480 PANTHER PTHR30009:SF4 8 480 5.1E-243 T 23-04-2016 CLI_RS14125 de73f1f83232299988281b01629e7a30 480 PANTHER PTHR30009 8 480 5.1E-243 T 23-04-2016 CLI_RS14125 de73f1f83232299988281b01629e7a30 480 SUPERFAMILY SSF55604 404 475 1.7E-16 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS14125 de73f1f83232299988281b01629e7a30 480 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 369 464 2.4E-15 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS14125 de73f1f83232299988281b01629e7a30 480 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 10 475 1.4E-171 T 23-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 SUPERFAMILY SSF69618 249 483 3.4E-50 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 PANTHER PTHR21091 1 233 2.9E-71 T 23-04-2016 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 236 2.7E-90 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 Gene3D G3DSA:3.30.950.10 118 254 5.9E-46 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 Gene3D G3DSA:3.40.1010.10 2 117 7.4E-37 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 Gene3D G3DSA:3.40.50.10090 373 483 8.9E-19 T 23-04-2016 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 Gene3D G3DSA:3.40.50.10090 255 372 1.3E-25 T 23-04-2016 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 SUPERFAMILY SSF53790 1 251 2.36E-69 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 82 115 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 Pfam PF02602 Uroporphyrinogen-III synthase HemD 263 479 2.6E-50 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 211 3.4E-39 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS04870 e6d64c04d0c9fd4da95a1e4d03bf54a6 486 PANTHER PTHR21091:SF16 1 233 2.9E-71 T 23-04-2016 CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 PANTHER PTHR11177:SF6 1 24 5.4E-123 T 23-04-2016 CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 PANTHER PTHR11177:SF6 41 530 5.4E-123 T 23-04-2016 CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 SUPERFAMILY SSF81296 430 542 7.84E-13 T 23-04-2016 IPR014756 Immunoglobulin E-set CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 SUPERFAMILY SSF81296 548 635 1.54E-13 T 23-04-2016 IPR014756 Immunoglobulin E-set CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 Gene3D G3DSA:3.20.20.80 401 435 1.5E-105 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 Gene3D G3DSA:3.20.20.80 31 317 1.5E-105 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 SUPERFAMILY SSF81296 644 735 9.8E-21 T 23-04-2016 IPR014756 Immunoglobulin E-set CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 Pfam PF00704 Glycosyl hydrolases family 18 44 424 5.4E-85 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 SMART SM00636 43 424 2.0E-126 T 23-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 Gene3D G3DSA:2.60.40.10 555 634 1.1E-15 T 23-04-2016 IPR013783 Immunoglobulin-like fold CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 Gene3D G3DSA:2.60.40.10 656 735 1.2E-22 T 23-04-2016 IPR013783 Immunoglobulin-like fold CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 Gene3D G3DSA:2.60.40.10 460 539 7.4E-14 T 23-04-2016 IPR013783 Immunoglobulin-like fold CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 SUPERFAMILY SSF54556 316 395 2.01E-8 T 23-04-2016 IPR029070 Chitinase insertion domain CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 Pfam PF08329 Chitinase A, N-terminal domain 660 735 2.0E-5 T 23-04-2016 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 Gene3D G3DSA:3.10.50.10 318 398 3.5E-16 T 23-04-2016 IPR029070 Chitinase insertion domain CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 SUPERFAMILY SSF51445 404 453 2.53E-93 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 SUPERFAMILY SSF51445 42 324 2.53E-93 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 PANTHER PTHR11177 1 24 5.4E-123 T 23-04-2016 CLI_RS14085 194862f0cc03bc5cbd7d7f35e5b4af5a 739 PANTHER PTHR11177 41 530 5.4E-123 T 23-04-2016 CLI_RS05350 7c5553b315d8e2af7d1734785581ee1e 204 Gene3D G3DSA:1.10.357.10 5 202 3.8E-39 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS05350 7c5553b315d8e2af7d1734785581ee1e 204 Pfam PF13305 WHG domain 94 180 2.8E-10 T 23-04-2016 IPR025996 WHG domain CLI_RS05350 7c5553b315d8e2af7d1734785581ee1e 204 PANTHER PTHR30055 1 198 2.8E-120 T 23-04-2016 CLI_RS05350 7c5553b315d8e2af7d1734785581ee1e 204 PANTHER PTHR30055:SF52 1 198 2.8E-120 T 23-04-2016 CLI_RS05350 7c5553b315d8e2af7d1734785581ee1e 204 SUPERFAMILY SSF46689 6 78 1.47E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS05350 7c5553b315d8e2af7d1734785581ee1e 204 SUPERFAMILY SSF48498 85 203 5.48E-13 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS05350 7c5553b315d8e2af7d1734785581ee1e 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 4.6E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS05350 7c5553b315d8e2af7d1734785581ee1e 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 4.6E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS05350 7c5553b315d8e2af7d1734785581ee1e 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 61 5.6E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS13050 d6553a5fe407b407d3e459eebc46bd27 297 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 2 293 37.081 T 23-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 CLI_RS13050 d6553a5fe407b407d3e459eebc46bd27 297 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 9 288 8.3E-103 T 23-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 CLI_RS13050 d6553a5fe407b407d3e459eebc46bd27 297 SUPERFAMILY SSF53795 122 281 1.77E-36 T 23-04-2016 CLI_RS13050 d6553a5fe407b407d3e459eebc46bd27 297 Pfam PF02603 HPr Serine kinase N terminus 3 114 3.5E-35 T 23-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 CLI_RS13050 d6553a5fe407b407d3e459eebc46bd27 297 Gene3D G3DSA:3.40.50.300 121 287 2.0E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13050 d6553a5fe407b407d3e459eebc46bd27 297 Pfam PF07475 HPr Serine kinase C-terminal domain 116 278 1.1E-68 T 23-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 CLI_RS13050 d6553a5fe407b407d3e459eebc46bd27 297 PANTHER PTHR30305 1 297 1.5E-134 T 23-04-2016 CLI_RS13050 d6553a5fe407b407d3e459eebc46bd27 297 Gene3D G3DSA:3.40.1390.20 7 119 7.8E-37 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CLI_RS13050 d6553a5fe407b407d3e459eebc46bd27 297 SUPERFAMILY SSF75138 8 118 2.22E-30 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CLI_RS13050 d6553a5fe407b407d3e459eebc46bd27 297 PANTHER PTHR30305:SF1 1 297 1.5E-134 T 23-04-2016 CLI_RS05460 0818bdd653e8cd48248c8b38b631eed8 419 Pfam PF00067 Cytochrome P450 277 397 1.2E-16 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 CLI_RS05460 0818bdd653e8cd48248c8b38b631eed8 419 PRINTS PR00463 E-class P450 group I signature 365 388 1.1E-7 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CLI_RS05460 0818bdd653e8cd48248c8b38b631eed8 419 PRINTS PR00463 E-class P450 group I signature 319 343 1.1E-7 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CLI_RS05460 0818bdd653e8cd48248c8b38b631eed8 419 PRINTS PR00463 E-class P450 group I signature 253 279 1.1E-7 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CLI_RS05460 0818bdd653e8cd48248c8b38b631eed8 419 PANTHER PTHR24302 75 415 3.4E-106 T 23-04-2016 CLI_RS05460 0818bdd653e8cd48248c8b38b631eed8 419 PANTHER PTHR24302:SF10 75 415 3.4E-106 T 23-04-2016 CLI_RS05460 0818bdd653e8cd48248c8b38b631eed8 419 SUPERFAMILY SSF48264 13 417 6.55E-66 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 CLI_RS05460 0818bdd653e8cd48248c8b38b631eed8 419 Gene3D G3DSA:1.10.630.10 13 417 2.6E-49 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 CLI_RS01630 4db2e9e95d2c261a0d78972be34a53fd 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 32 - T 23-04-2016 IPR019844 Cold-shock conserved site CLI_RS01630 4db2e9e95d2c261a0d78972be34a53fd 65 SMART SM00357 2 65 4.9E-30 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CLI_RS01630 4db2e9e95d2c261a0d78972be34a53fd 65 Gene3D G3DSA:2.40.50.140 2 64 2.1E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS01630 4db2e9e95d2c261a0d78972be34a53fd 65 PIRSF PIRSF002599 1 65 5.6E-23 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 CLI_RS01630 4db2e9e95d2c261a0d78972be34a53fd 65 PANTHER PTHR11544 1 65 1.3E-37 T 23-04-2016 CLI_RS01630 4db2e9e95d2c261a0d78972be34a53fd 65 PRINTS PR00050 Cold shock protein signature 38 56 9.9E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLI_RS01630 4db2e9e95d2c261a0d78972be34a53fd 65 PRINTS PR00050 Cold shock protein signature 3 18 9.9E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLI_RS01630 4db2e9e95d2c261a0d78972be34a53fd 65 PRINTS PR00050 Cold shock protein signature 23 32 9.9E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLI_RS01630 4db2e9e95d2c261a0d78972be34a53fd 65 SUPERFAMILY SSF50249 2 64 1.91E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS01630 4db2e9e95d2c261a0d78972be34a53fd 65 Pfam PF00313 'Cold-shock' DNA-binding domain 1 63 7.1E-30 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 Gene3D G3DSA:3.40.50.300 1 211 2.4E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 Pfam PF05191 Adenylate kinase, active site lid 127 162 6.5E-17 T 23-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 SUPERFAMILY SSF52540 1 213 5.0E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 PRINTS PR00094 Adenylate kinase signature 32 46 1.9E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 PRINTS PR00094 Adenylate kinase signature 177 191 1.9E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 PRINTS PR00094 Adenylate kinase signature 160 175 1.9E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 PRINTS PR00094 Adenylate kinase signature 4 17 1.9E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 PRINTS PR00094 Adenylate kinase signature 81 97 1.9E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 Hamap MF_00235 Adenylate kinase [adk]. 1 213 53.753 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 1.0E-83 T 23-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 Pfam PF00406 Adenylate kinase 5 190 2.8E-58 T 23-04-2016 CLI_RS17735 72908d8b3d33012503b28c307f5e244c 216 PANTHER PTHR23359 1 212 5.3E-108 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CLI_RS15015 35aba9142eafb34f4747b150090934b9 84 Pfam PF10779 Haemolysin XhlA 13 78 1.6E-22 T 23-04-2016 IPR019715 Haemolysin XhlA CLI_RS17935 e1958853d2c83d24875a4748532daa7c 213 Pfam PF04542 Sigma-70 region 2 38 106 1.2E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS17935 e1958853d2c83d24875a4748532daa7c 213 Gene3D G3DSA:1.10.10.10 159 207 6.1E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17935 e1958853d2c83d24875a4748532daa7c 213 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 15 211 1.5E-114 T 23-04-2016 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS17935 e1958853d2c83d24875a4748532daa7c 213 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 210 6.1E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS17935 e1958853d2c83d24875a4748532daa7c 213 PANTHER PTHR30385 19 210 6.6E-51 T 23-04-2016 CLI_RS17935 e1958853d2c83d24875a4748532daa7c 213 Gene3D G3DSA:1.10.1740.10 19 128 8.6E-18 T 23-04-2016 CLI_RS17935 e1958853d2c83d24875a4748532daa7c 213 SUPERFAMILY SSF88946 19 106 4.32E-22 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS17935 e1958853d2c83d24875a4748532daa7c 213 PANTHER PTHR30385:SF1 19 210 6.6E-51 T 23-04-2016 CLI_RS17935 e1958853d2c83d24875a4748532daa7c 213 Pfam PF08281 Sigma-70, region 4 171 206 1.6E-8 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS17935 e1958853d2c83d24875a4748532daa7c 213 SUPERFAMILY SSF88659 124 212 2.35E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS17935 e1958853d2c83d24875a4748532daa7c 213 PIRSF PIRSF002939 2 213 1.1E-109 T 23-04-2016 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 CLI_RS17935 e1958853d2c83d24875a4748532daa7c 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 178 205 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLI_RS03685 f244504c857543b80ff1b60d3f495dfd 325 SUPERFAMILY SSF82649 241 325 1.41E-26 T 23-04-2016 CLI_RS03685 f244504c857543b80ff1b60d3f495dfd 325 PANTHER PTHR12561:SF3 1 325 7.9E-123 T 23-04-2016 CLI_RS03685 f244504c857543b80ff1b60d3f495dfd 325 Gene3D G3DSA:3.30.390.50 241 325 9.0E-31 T 23-04-2016 CLI_RS03685 f244504c857543b80ff1b60d3f495dfd 325 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 317 9.9E-104 T 23-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 CLI_RS03685 f244504c857543b80ff1b60d3f495dfd 325 Gene3D G3DSA:3.90.1550.10 1 239 3.2E-84 T 23-04-2016 CLI_RS03685 f244504c857543b80ff1b60d3f495dfd 325 Pfam PF03099 Biotin/lipoate A/B protein ligase family 44 149 4.0E-13 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CLI_RS03685 f244504c857543b80ff1b60d3f495dfd 325 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 241 324 2.8E-28 T 23-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 CLI_RS03685 f244504c857543b80ff1b60d3f495dfd 325 SUPERFAMILY SSF55681 1 239 4.33E-75 T 23-04-2016 CLI_RS03685 f244504c857543b80ff1b60d3f495dfd 325 PANTHER PTHR12561 1 325 7.9E-123 T 23-04-2016 CLI_RS17190 70b076272ccffff486fbbcd7b27c7b8e 103 Gene3D G3DSA:3.40.50.270 1 102 7.0E-40 T 23-04-2016 CLI_RS17190 70b076272ccffff486fbbcd7b27c7b8e 103 SUPERFAMILY SSF52794 1 102 1.05E-36 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLI_RS17190 70b076272ccffff486fbbcd7b27c7b8e 103 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 95 4.2E-33 T 23-04-2016 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 CLI_RS17190 70b076272ccffff486fbbcd7b27c7b8e 103 PANTHER PTHR34581 2 102 2.2E-53 T 23-04-2016 CLI_RS17190 70b076272ccffff486fbbcd7b27c7b8e 103 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 2.3E-23 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLI_RS17190 70b076272ccffff486fbbcd7b27c7b8e 103 PANTHER PTHR34581:SF2 2 102 2.2E-53 T 23-04-2016 CLI_RS00180 3845e4ee46b4d96c4097843224505834 541 SUPERFAMILY SSF52540 31 221 4.42E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00180 3845e4ee46b4d96c4097843224505834 541 Gene3D G3DSA:3.40.50.300 15 166 3.0E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00180 3845e4ee46b4d96c4097843224505834 541 SUPERFAMILY SSF48019 243 365 9.35E-25 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 CLI_RS00180 3845e4ee46b4d96c4097843224505834 541 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 368 3.6E-18 T 23-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CLI_RS00180 3845e4ee46b4d96c4097843224505834 541 SMART SM00382 37 179 3.2E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS00180 3845e4ee46b4d96c4097843224505834 541 Gene3D G3DSA:1.10.8.60 167 242 1.6E-32 T 23-04-2016 CLI_RS00180 3845e4ee46b4d96c4097843224505834 541 PANTHER PTHR11669:SF0 1 514 4.2E-205 T 23-04-2016 CLI_RS00180 3845e4ee46b4d96c4097843224505834 541 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 359 1.6E-142 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CLI_RS00180 3845e4ee46b4d96c4097843224505834 541 PANTHER PTHR11669 1 514 4.2E-205 T 23-04-2016 CLI_RS00180 3845e4ee46b4d96c4097843224505834 541 Gene3D G3DSA:1.20.272.10 243 360 1.0E-16 T 23-04-2016 CLI_RS00180 3845e4ee46b4d96c4097843224505834 541 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.5E-46 T 23-04-2016 CLI_RS07305 e885739acdad2705521dd0df270ca0a7 245 PANTHER PTHR24220 3 242 1.6E-129 T 23-04-2016 CLI_RS07305 e885739acdad2705521dd0df270ca0a7 245 SUPERFAMILY SSF52540 1 237 7.0E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07305 e885739acdad2705521dd0df270ca0a7 245 Pfam PF00005 ABC transporter 17 168 6.0E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS07305 e885739acdad2705521dd0df270ca0a7 245 PIRSF PIRSF039085 1 244 2.0E-108 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CLI_RS07305 e885739acdad2705521dd0df270ca0a7 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07305 e885739acdad2705521dd0df270ca0a7 245 PANTHER PTHR24220:SF327 3 242 1.6E-129 T 23-04-2016 CLI_RS07305 e885739acdad2705521dd0df270ca0a7 245 Gene3D G3DSA:3.40.50.300 1 240 1.4E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07305 e885739acdad2705521dd0df270ca0a7 245 SMART SM00382 26 216 6.9E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS04205 336094f7322b3a9effac01494416d0c4 65 TIGRFAM TIGR02861 SASP_H: small acid-soluble spore protein, H-type 1 56 6.8E-20 T 23-04-2016 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLI_RS04205 336094f7322b3a9effac01494416d0c4 65 Hamap MF_00667 Small, acid-soluble spore protein H [sspH]. 1 57 14.022 T 23-04-2016 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLI_RS04205 336094f7322b3a9effac01494416d0c4 65 Pfam PF08141 Small acid-soluble spore protein H family 1 56 4.7E-15 T 23-04-2016 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLI_RS17280 449adfc0e4eb7def8e32e98b8e84a5e8 135 SUPERFAMILY SSF55729 2 134 1.33E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS17280 449adfc0e4eb7def8e32e98b8e84a5e8 135 PANTHER PTHR23091:SF237 1 135 6.2E-15 T 23-04-2016 CLI_RS17280 449adfc0e4eb7def8e32e98b8e84a5e8 135 Pfam PF00583 Acetyltransferase (GNAT) family 41 114 1.2E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS17280 449adfc0e4eb7def8e32e98b8e84a5e8 135 Gene3D G3DSA:3.40.630.30 1 133 2.0E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS17280 449adfc0e4eb7def8e32e98b8e84a5e8 135 PANTHER PTHR23091 1 135 6.2E-15 T 23-04-2016 CLI_RS14170 b49bc58e606dbab4bcee58422654c44c 162 Gene3D G3DSA:1.10.150.120 82 158 1.1E-27 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLI_RS14170 b49bc58e606dbab4bcee58422654c44c 162 PANTHER PTHR11908:SF66 6 159 3.5E-31 T 23-04-2016 CLI_RS14170 b49bc58e606dbab4bcee58422654c44c 162 SUPERFAMILY SSF47741 80 155 8.37E-28 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLI_RS14170 b49bc58e606dbab4bcee58422654c44c 162 SUPERFAMILY SSF54292 10 94 1.14E-21 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLI_RS14170 b49bc58e606dbab4bcee58422654c44c 162 Gene3D G3DSA:3.10.20.30 9 81 5.5E-25 T 23-04-2016 IPR012675 Beta-grasp domain CLI_RS14170 b49bc58e606dbab4bcee58422654c44c 162 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 65 1.2E-5 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLI_RS14170 b49bc58e606dbab4bcee58422654c44c 162 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 46 54 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CLI_RS14170 b49bc58e606dbab4bcee58422654c44c 162 Pfam PF01799 [2Fe-2S] binding domain 80 149 2.7E-25 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLI_RS14170 b49bc58e606dbab4bcee58422654c44c 162 PANTHER PTHR11908 6 159 3.5E-31 T 23-04-2016 CLI_RS16290 ca29c630c08d43f3b6d23beced124f32 276 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 179 275 2.9E-34 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CLI_RS16290 ca29c630c08d43f3b6d23beced124f32 276 PIRSF PIRSF000105 1 276 2.3E-89 T 23-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 CLI_RS16290 ca29c630c08d43f3b6d23beced124f32 276 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 176 200 - T 23-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CLI_RS16290 ca29c630c08d43f3b6d23beced124f32 276 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2 176 3.3E-61 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CLI_RS16290 ca29c630c08d43f3b6d23beced124f32 276 PANTHER PTHR23309 2 276 2.6E-138 T 23-04-2016 CLI_RS16290 ca29c630c08d43f3b6d23beced124f32 276 Gene3D G3DSA:1.10.1040.10 181 276 9.7E-37 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLI_RS16290 ca29c630c08d43f3b6d23beced124f32 276 SUPERFAMILY SSF51735 2 176 4.72E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16290 ca29c630c08d43f3b6d23beced124f32 276 Gene3D G3DSA:3.40.50.720 1 180 2.0E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16290 ca29c630c08d43f3b6d23beced124f32 276 SUPERFAMILY SSF48179 178 275 8.5E-33 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLI_RS10170 d0de3dc1a2e55aa405918874acb4ef51 376 Gene3D G3DSA:3.40.50.300 3 207 1.7E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10170 d0de3dc1a2e55aa405918874acb4ef51 376 SMART SM00487 21 218 4.9E-60 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS10170 d0de3dc1a2e55aa405918874acb4ef51 376 SMART SM00490 254 335 1.3E-34 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS10170 d0de3dc1a2e55aa405918874acb4ef51 376 PANTHER PTHR24031 1 365 2.0E-231 T 23-04-2016 CLI_RS10170 d0de3dc1a2e55aa405918874acb4ef51 376 PANTHER PTHR24031:SF276 1 365 2.0E-231 T 23-04-2016 CLI_RS10170 d0de3dc1a2e55aa405918874acb4ef51 376 Pfam PF00270 DEAD/DEAH box helicase 26 192 2.1E-50 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLI_RS10170 d0de3dc1a2e55aa405918874acb4ef51 376 Pfam PF00271 Helicase conserved C-terminal domain 227 335 1.1E-31 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS10170 d0de3dc1a2e55aa405918874acb4ef51 376 Gene3D G3DSA:3.40.50.300 208 368 7.4E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10170 d0de3dc1a2e55aa405918874acb4ef51 376 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLI_RS10170 d0de3dc1a2e55aa405918874acb4ef51 376 SUPERFAMILY SSF52540 71 356 7.72E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00900 7faa65497cb6e4210c48172ff23d99e2 159 Gene3D G3DSA:1.20.5.620 65 123 5.5E-6 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLI_RS00900 7faa65497cb6e4210c48172ff23d99e2 159 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 12 157 6.4E-29 T 23-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 CLI_RS00900 7faa65497cb6e4210c48172ff23d99e2 159 SUPERFAMILY SSF81573 65 122 4.05E-7 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLI_RS00900 7faa65497cb6e4210c48172ff23d99e2 159 PANTHER PTHR33445 1 158 4.0E-39 T 23-04-2016 CLI_RS00900 7faa65497cb6e4210c48172ff23d99e2 159 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 157 12.688 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CLI_RS00900 7faa65497cb6e4210c48172ff23d99e2 159 Pfam PF00430 ATP synthase B/B' CF(0) 8 137 1.0E-19 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CLI_RS12555 7184e403e5639d9d6af5b330ac951ed5 147 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 144 3.0E-48 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS12555 7184e403e5639d9d6af5b330ac951ed5 147 PIRSF PIRSF004749 1 147 2.2E-48 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS12555 7184e403e5639d9d6af5b330ac951ed5 147 SUPERFAMILY SSF56420 2 145 1.23E-54 T 23-04-2016 IPR023635 Peptide deformylase CLI_RS12555 7184e403e5639d9d6af5b330ac951ed5 147 Pfam PF01327 Polypeptide deformylase 4 144 3.3E-49 T 23-04-2016 IPR023635 Peptide deformylase CLI_RS12555 7184e403e5639d9d6af5b330ac951ed5 147 Hamap MF_00163 Peptide deformylase [def]. 2 147 28.071 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS12555 7184e403e5639d9d6af5b330ac951ed5 147 PANTHER PTHR10458 1 146 1.2E-61 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS12555 7184e403e5639d9d6af5b330ac951ed5 147 PRINTS PR01576 Peptide deformylase signature 98 116 3.2E-35 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS12555 7184e403e5639d9d6af5b330ac951ed5 147 PRINTS PR01576 Peptide deformylase signature 117 146 3.2E-35 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS12555 7184e403e5639d9d6af5b330ac951ed5 147 PRINTS PR01576 Peptide deformylase signature 86 97 3.2E-35 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS12555 7184e403e5639d9d6af5b330ac951ed5 147 PRINTS PR01576 Peptide deformylase signature 33 62 3.2E-35 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS12555 7184e403e5639d9d6af5b330ac951ed5 147 Gene3D G3DSA:3.90.45.10 5 145 6.6E-57 T 23-04-2016 IPR023635 Peptide deformylase CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 1.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 1.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 1.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 1.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 288 6.2E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 Gene3D G3DSA:1.10.287.130 221 285 5.6E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 Gene3D G3DSA:3.30.565.10 300 448 3.0E-47 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 448 3.0E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 SMART SM00388 230 294 9.8E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 PANTHER PTHR24423 170 448 2.1E-77 T 23-04-2016 CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 PANTHER PTHR24423 85 128 2.1E-77 T 23-04-2016 CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 SUPERFAMILY SSF55874 305 448 7.07E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 SUPERFAMILY SSF47384 215 293 8.83E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05450 ea0895e2f306fabf473be47b48c7f61d 451 SMART SM00387 341 451 1.4E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS12550 6b19adc2590d80281983ffb85418c9f1 321 SUPERFAMILY SSF50486 215 319 2.35E-31 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CLI_RS12550 6b19adc2590d80281983ffb85418c9f1 321 PANTHER PTHR11138 14 317 2.0E-115 T 23-04-2016 CLI_RS12550 6b19adc2590d80281983ffb85418c9f1 321 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 12 314 35.168 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLI_RS12550 6b19adc2590d80281983ffb85418c9f1 321 Pfam PF02911 Formyl transferase, C-terminal domain 215 311 1.4E-29 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLI_RS12550 6b19adc2590d80281983ffb85418c9f1 321 Gene3D G3DSA:3.10.25.10 217 320 5.8E-36 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLI_RS12550 6b19adc2590d80281983ffb85418c9f1 321 Gene3D G3DSA:3.40.50.170 13 215 1.2E-68 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLI_RS12550 6b19adc2590d80281983ffb85418c9f1 321 SUPERFAMILY SSF53328 14 217 2.22E-62 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLI_RS12550 6b19adc2590d80281983ffb85418c9f1 321 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 143 166 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLI_RS12550 6b19adc2590d80281983ffb85418c9f1 321 Pfam PF00551 Formyl transferase 18 190 4.9E-40 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLI_RS12550 6b19adc2590d80281983ffb85418c9f1 321 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 13 311 3.0E-96 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLI_RS03865 3721c5fb0a00bde20de027133fc8ff27 488 SMART SM00283 216 463 3.7E-35 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS03865 3721c5fb0a00bde20de027133fc8ff27 488 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 237 266 2.4E-16 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS03865 3721c5fb0a00bde20de027133fc8ff27 488 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 341 2.4E-16 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS03865 3721c5fb0a00bde20de027133fc8ff27 488 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 343 372 2.4E-16 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS03865 3721c5fb0a00bde20de027133fc8ff27 488 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 282 466 5.2E-38 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS03865 3721c5fb0a00bde20de027133fc8ff27 488 SUPERFAMILY SSF58104 220 485 3.66E-51 T 23-04-2016 CLI_RS03865 3721c5fb0a00bde20de027133fc8ff27 488 PANTHER PTHR32089 106 409 3.0E-152 T 23-04-2016 CLI_RS03865 3721c5fb0a00bde20de027133fc8ff27 488 PANTHER PTHR32089 438 488 3.0E-152 T 23-04-2016 CLI_RS03865 3721c5fb0a00bde20de027133fc8ff27 488 PANTHER PTHR32089:SF47 106 409 3.0E-152 T 23-04-2016 CLI_RS03865 3721c5fb0a00bde20de027133fc8ff27 488 PANTHER PTHR32089:SF47 438 488 3.0E-152 T 23-04-2016 CLI_RS03865 3721c5fb0a00bde20de027133fc8ff27 488 Gene3D G3DSA:1.10.287.950 236 419 7.6E-45 T 23-04-2016 CLI_RS03865 3721c5fb0a00bde20de027133fc8ff27 488 Gene3D G3DSA:1.10.287.950 422 488 5.1E-4 T 23-04-2016 CLI_RS03125 87874fde9328db80fce18e7ec5e361bc 48 TIGRFAM TIGR04333 Clo7Bot_mod_Cys: Cys-rich peptide, Clo7bot family 1 38 3.5E-13 T 23-04-2016 IPR027601 Cys-rich peptide, Clo7bot family CLI_RS01505 3827ab1798037f42debbc82e63f52633 224 PANTHER PTHR11080 40 202 2.4E-27 T 23-04-2016 CLI_RS01505 3827ab1798037f42debbc82e63f52633 224 Pfam PF00857 Isochorismatase family 65 202 8.3E-30 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CLI_RS01505 3827ab1798037f42debbc82e63f52633 224 SUPERFAMILY SSF52499 48 203 5.76E-31 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CLI_RS01505 3827ab1798037f42debbc82e63f52633 224 Gene3D G3DSA:3.40.50.850 52 193 2.6E-30 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CLI_RS17545 2782da11757542f5e5a898b6b9c2dc49 249 SUPERFAMILY SSF52518 12 239 8.72E-60 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS17545 2782da11757542f5e5a898b6b9c2dc49 249 PANTHER PTHR18968:SF117 8 249 1.5E-129 T 23-04-2016 CLI_RS17545 2782da11757542f5e5a898b6b9c2dc49 249 Gene3D G3DSA:3.40.50.970 11 229 1.6E-61 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS17545 2782da11757542f5e5a898b6b9c2dc49 249 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 50 209 3.8E-25 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLI_RS17545 2782da11757542f5e5a898b6b9c2dc49 249 PANTHER PTHR18968 8 249 1.5E-129 T 23-04-2016 CLI_RS07865 a4a00265ba0af971e04661a57ead7490 156 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 121 127 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 CLI_RS07865 a4a00265ba0af971e04661a57ead7490 156 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 2 153 38.947 T 23-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CLI_RS07865 a4a00265ba0af971e04661a57ead7490 156 PANTHER PTHR10815 7 151 1.3E-55 T 23-04-2016 CLI_RS07865 a4a00265ba0af971e04661a57ead7490 156 Gene3D G3DSA:1.10.10.10 69 151 4.2E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07865 a4a00265ba0af971e04661a57ead7490 156 SUPERFAMILY SSF53155 5 76 6.67E-14 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 CLI_RS07865 a4a00265ba0af971e04661a57ead7490 156 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 71 150 5.5E-35 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CLI_RS07865 a4a00265ba0af971e04661a57ead7490 156 SUPERFAMILY SSF46767 70 151 2.09E-31 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CLI_RS07865 a4a00265ba0af971e04661a57ead7490 156 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 72 151 1.6E-32 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CLI_RS07865 a4a00265ba0af971e04661a57ead7490 156 PANTHER PTHR10815:SF5 7 151 1.3E-55 T 23-04-2016 CLI_RS12000 6445e58a961be0463d60f1a7dd4b211d 445 Pfam PF00919 Uncharacterized protein family UPF0004 5 103 7.0E-26 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CLI_RS12000 6445e58a961be0463d60f1a7dd4b211d 445 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 439 66.074 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CLI_RS12000 6445e58a961be0463d60f1a7dd4b211d 445 SMART SM00729 146 364 6.0E-53 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS12000 6445e58a961be0463d60f1a7dd4b211d 445 SUPERFAMILY SSF102114 142 369 4.84E-57 T 23-04-2016 CLI_RS12000 6445e58a961be0463d60f1a7dd4b211d 445 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 437 1.4E-132 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CLI_RS12000 6445e58a961be0463d60f1a7dd4b211d 445 Gene3D G3DSA:2.40.50.140 379 442 1.7E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12000 6445e58a961be0463d60f1a7dd4b211d 445 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CLI_RS12000 6445e58a961be0463d60f1a7dd4b211d 445 PANTHER PTHR11918 5 442 3.4E-196 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS12000 6445e58a961be0463d60f1a7dd4b211d 445 Pfam PF04055 Radical SAM superfamily 152 322 1.3E-27 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS12000 6445e58a961be0463d60f1a7dd4b211d 445 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 437 6.5E-149 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CLI_RS12000 6445e58a961be0463d60f1a7dd4b211d 445 Gene3D G3DSA:3.80.30.20 145 376 2.1E-76 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS12000 6445e58a961be0463d60f1a7dd4b211d 445 PANTHER PTHR11918:SF57 5 442 3.4E-196 T 23-04-2016 CLI_RS01155 14baa2377fc3c9fc5dcef034aefa678f 173 Pfam PF01066 CDP-alcohol phosphatidyltransferase 9 72 8.7E-14 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLI_RS01155 14baa2377fc3c9fc5dcef034aefa678f 173 PANTHER PTHR15362 9 168 5.7E-36 T 23-04-2016 CLI_RS01155 14baa2377fc3c9fc5dcef034aefa678f 173 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLI_RS01155 14baa2377fc3c9fc5dcef034aefa678f 173 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 14 169 3.4E-37 T 23-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 CLI_RS01155 14baa2377fc3c9fc5dcef034aefa678f 173 PANTHER PTHR15362:SF5 9 168 5.7E-36 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 SMART SM00116 256 304 3.8E-4 T 23-04-2016 IPR000644 CBS domain CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 SMART SM00116 77 125 16.0 T 23-04-2016 IPR000644 CBS domain CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 PANTHER PTHR12112 266 546 6.9E-88 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 PANTHER PTHR12112 1 62 6.9E-88 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 PANTHER PTHR12112:SF17 266 546 6.9E-88 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 PANTHER PTHR12112:SF17 1 62 6.9E-88 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 SUPERFAMILY SSF75138 139 252 1.44E-28 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 Pfam PF00571 CBS domain 251 300 1.5E-7 T 23-04-2016 IPR000644 CBS domain CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 Pfam PF00571 CBS domain 70 120 7.8E-4 T 23-04-2016 IPR000644 CBS domain CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 Gene3D G3DSA:3.90.1640.10 4 70 4.2E-64 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 Gene3D G3DSA:3.90.1640.10 307 423 4.2E-64 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 SUPERFAMILY SSF64182 3 72 3.03E-68 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 SUPERFAMILY SSF64182 307 543 3.03E-68 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 Gene3D G3DSA:3.10.580.10 261 300 8.9E-23 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 Gene3D G3DSA:3.10.580.10 71 132 8.9E-23 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 SUPERFAMILY SSF54631 225 300 3.23E-25 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 SUPERFAMILY SSF54631 68 141 3.23E-25 T 23-04-2016 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 Pfam PF01368 DHH family 5 382 4.6E-27 T 23-04-2016 IPR001667 DDH domain CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 Pfam PF07085 DRTGG domain 142 244 2.0E-25 T 23-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 Gene3D G3DSA:3.40.1390.20 136 260 6.1E-36 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 Pfam PF02833 DHHA2 domain 419 543 2.4E-18 T 23-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 CLI_RS13200 df42040c1af34447d8e301d2efd17bc3 547 SMART SM01131 417 544 3.1E-49 T 23-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 CLI_RS02205 4ff6db9487bf85d74465a7c487261cfe 340 Gene3D G3DSA:1.20.1540.10 154 333 8.8E-43 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CLI_RS02205 4ff6db9487bf85d74465a7c487261cfe 340 Pfam PF01694 Rhomboid family 198 335 4.7E-37 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CLI_RS02205 4ff6db9487bf85d74465a7c487261cfe 340 PANTHER PTHR22936:SF4 4 334 7.8E-54 T 23-04-2016 CLI_RS02205 4ff6db9487bf85d74465a7c487261cfe 340 PANTHER PTHR22936 4 334 7.8E-54 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 CLI_RS02205 4ff6db9487bf85d74465a7c487261cfe 340 SUPERFAMILY SSF144091 151 338 4.71E-46 T 23-04-2016 CLI_RS03835 8c75e0d3f7f1dae0b07406094121dff5 182 SUPERFAMILY SSF51182 50 181 1.04E-17 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS03835 8c75e0d3f7f1dae0b07406094121dff5 182 PANTHER PTHR10245 2 181 1.0E-49 T 23-04-2016 CLI_RS03835 8c75e0d3f7f1dae0b07406094121dff5 182 Pfam PF07883 Cupin domain 111 178 3.3E-9 T 23-04-2016 IPR013096 Cupin 2, conserved barrel CLI_RS03835 8c75e0d3f7f1dae0b07406094121dff5 182 Gene3D G3DSA:1.10.260.40 2 72 3.1E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS03835 8c75e0d3f7f1dae0b07406094121dff5 182 SMART SM00530 10 65 6.3E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS03835 8c75e0d3f7f1dae0b07406094121dff5 182 Gene3D G3DSA:2.60.120.10 94 181 4.7E-22 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS03835 8c75e0d3f7f1dae0b07406094121dff5 182 Pfam PF01381 Helix-turn-helix 11 64 9.9E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS03835 8c75e0d3f7f1dae0b07406094121dff5 182 SUPERFAMILY SSF47413 2 69 9.85E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS03835 8c75e0d3f7f1dae0b07406094121dff5 182 PANTHER PTHR10245:SF9 2 181 1.0E-49 T 23-04-2016 CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 Gene3D G3DSA:2.40.50.140 622 712 2.9E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 Hamap MF_01895 Ribonuclease R [rnr]. 21 702 58.709 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 Pfam PF00575 S1 RNA binding domain 620 691 3.3E-14 T 23-04-2016 IPR003029 S1 domain GO:0003676 CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 PANTHER PTHR23355:SF9 5 713 3.7E-261 T 23-04-2016 CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 SUPERFAMILY SSF50249 205 619 2.4E-148 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 SMART SM00955 244 573 7.4E-183 T 23-04-2016 CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 SMART SM00357 134 198 7.3E-8 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 SMART SM00357 69 129 2.4E-13 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 SMART SM00316 131 195 6.7 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 SMART SM00316 620 702 5.1E-14 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 SUPERFAMILY SSF50249 50 131 1.37E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 SUPERFAMILY SSF50249 620 721 1.86E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 Pfam PF08206 Ribonuclease B OB domain 144 197 2.8E-7 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 Pfam PF08206 Ribonuclease B OB domain 70 128 2.0E-23 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 PANTHER PTHR23355 5 713 3.7E-261 T 23-04-2016 CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 TIGRFAM TIGR02063 RNase_R: ribonuclease R 1 702 1.6E-282 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 54 702 1.3E-225 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 SUPERFAMILY SSF50249 122 221 2.95E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS01325 872b60c819cf4f7d8949fab153ef3e2e 725 Pfam PF00773 RNB domain 244 572 2.1E-117 T 23-04-2016 CLI_RS13765 e30561bcc044f0561bfa28f4fb0a2cd8 183 Pfam PF01965 DJ-1/PfpI family 3 164 9.9E-50 T 23-04-2016 IPR002818 DJ-1/PfpI CLI_RS13765 e30561bcc044f0561bfa28f4fb0a2cd8 183 Gene3D G3DSA:3.40.50.880 1 180 2.4E-63 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS13765 e30561bcc044f0561bfa28f4fb0a2cd8 183 PANTHER PTHR11019:SF4 1 179 5.4E-74 T 23-04-2016 CLI_RS13765 e30561bcc044f0561bfa28f4fb0a2cd8 183 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 175 1.2E-59 T 23-04-2016 IPR006287 DJ-1 CLI_RS13765 e30561bcc044f0561bfa28f4fb0a2cd8 183 SUPERFAMILY SSF52317 1 169 1.48E-52 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS13765 e30561bcc044f0561bfa28f4fb0a2cd8 183 PANTHER PTHR11019 1 179 5.4E-74 T 23-04-2016 CLI_RS03460 8186bb105e199445be0f814d532bcf92 348 PANTHER PTHR30294 1 347 5.0E-71 T 23-04-2016 CLI_RS03460 8186bb105e199445be0f814d532bcf92 348 Pfam PF12698 ABC-2 family transporter protein 18 339 1.7E-37 T 23-04-2016 CLI_RS03460 8186bb105e199445be0f814d532bcf92 348 PANTHER PTHR30294:SF12 1 347 5.0E-71 T 23-04-2016 CLI_RS00660 38ff72126a18d876038ecfece1da2a34 248 SMART SM01001 119 248 6.3E-38 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CLI_RS00660 38ff72126a18d876038ecfece1da2a34 248 Pfam PF00731 AIR carboxylase 121 245 4.3E-16 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CLI_RS00660 38ff72126a18d876038ecfece1da2a34 248 Gene3D G3DSA:3.40.50.7700 120 246 2.9E-26 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CLI_RS00660 38ff72126a18d876038ecfece1da2a34 248 SUPERFAMILY SSF52255 119 247 7.98E-30 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CLI_RS00660 38ff72126a18d876038ecfece1da2a34 248 PANTHER PTHR23046:SF3 2 248 1.4E-128 T 23-04-2016 CLI_RS00660 38ff72126a18d876038ecfece1da2a34 248 PANTHER PTHR23046 2 248 1.4E-128 T 23-04-2016 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 197 208 8.3E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 224 237 8.3E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 8.3E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 8.3E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 8.3E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 Gene3D G3DSA:3.30.930.10 4 239 3.3E-100 T 23-04-2016 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 1.2E-19 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 PANTHER PTHR11777 1 879 0.0 T 23-04-2016 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 173.415 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 SUPERFAMILY SSF55186 554 718 1.7E-51 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 857 6.0E-302 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 SUPERFAMILY SSF101353 244 462 1.57E-66 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 Pfam PF01411 tRNA synthetases class II (A) 8 558 3.9E-202 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 Pfam PF02272 DHHA1 domain 802 871 1.3E-15 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 PANTHER PTHR11777:SF9 1 879 0.0 T 23-04-2016 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 SUPERFAMILY SSF50447 455 554 8.47E-17 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 SMART SM00863 655 698 6.7E-23 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CLI_RS12830 8102f803473c6b94684de5852f290a6a 879 SUPERFAMILY SSF55681 4 243 2.49E-94 T 23-04-2016 CLI_RS16315 7d0b39354bead26c30263f2aaaa3258a 298 SMART SM00471 144 278 2.0E-8 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS16315 7d0b39354bead26c30263f2aaaa3258a 298 PANTHER PTHR37294:SF1 2 298 1.2E-118 T 23-04-2016 CLI_RS16315 7d0b39354bead26c30263f2aaaa3258a 298 PANTHER PTHR37294 2 298 1.2E-118 T 23-04-2016 CLI_RS16315 7d0b39354bead26c30263f2aaaa3258a 298 SUPERFAMILY SSF109604 140 267 3.93E-19 T 23-04-2016 CLI_RS16315 7d0b39354bead26c30263f2aaaa3258a 298 Pfam PF01966 HD domain 149 268 3.2E-14 T 23-04-2016 IPR006674 HD domain CLI_RS16315 7d0b39354bead26c30263f2aaaa3258a 298 Gene3D G3DSA:1.10.3210.10 140 292 5.4E-16 T 23-04-2016 IPR006674 HD domain CLI_RS16315 7d0b39354bead26c30263f2aaaa3258a 298 TIGRFAM TIGR00277 HDIG: HDIG domain 147 242 2.9E-9 T 23-04-2016 IPR006675 HDIG domain CLI_RS06445 900f6281630654cb523d0666343291d1 243 SUPERFAMILY SSF52540 4 225 3.71E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06445 900f6281630654cb523d0666343291d1 243 Gene3D G3DSA:3.40.50.300 2 228 1.9E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06445 900f6281630654cb523d0666343291d1 243 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS06445 900f6281630654cb523d0666343291d1 243 PANTHER PTHR24220:SF523 8 232 1.2E-89 T 23-04-2016 CLI_RS06445 900f6281630654cb523d0666343291d1 243 PANTHER PTHR24220 8 232 1.2E-89 T 23-04-2016 CLI_RS06445 900f6281630654cb523d0666343291d1 243 SMART SM00382 31 218 3.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06445 900f6281630654cb523d0666343291d1 243 Pfam PF00005 ABC transporter 22 163 1.1E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS06805 d0f69f8560b66fb2035efe0a3f189864 297 Gene3D G3DSA:3.30.1180.10 160 289 4.0E-40 T 23-04-2016 CLI_RS06805 d0f69f8560b66fb2035efe0a3f189864 297 PANTHER PTHR33434 1 297 8.9E-133 T 23-04-2016 CLI_RS06805 d0f69f8560b66fb2035efe0a3f189864 297 Pfam PF02645 Uncharacterised protein, DegV family COG1307 6 285 3.6E-80 T 23-04-2016 IPR003797 DegV CLI_RS06805 d0f69f8560b66fb2035efe0a3f189864 297 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 6 285 1.5E-94 T 23-04-2016 IPR003797 DegV CLI_RS06805 d0f69f8560b66fb2035efe0a3f189864 297 PANTHER PTHR33434:SF3 1 297 8.9E-133 T 23-04-2016 CLI_RS06805 d0f69f8560b66fb2035efe0a3f189864 297 Gene3D G3DSA:3.40.50.10440 67 157 2.4E-42 T 23-04-2016 CLI_RS06805 d0f69f8560b66fb2035efe0a3f189864 297 Gene3D G3DSA:3.40.50.10440 1 29 2.4E-42 T 23-04-2016 CLI_RS06805 d0f69f8560b66fb2035efe0a3f189864 297 SUPERFAMILY SSF82549 4 287 7.06E-84 T 23-04-2016 CLI_RS06805 d0f69f8560b66fb2035efe0a3f189864 297 Gene3D G3DSA:2.20.28.50 30 65 4.4E-6 T 23-04-2016 CLI_RS05340 89cbf32c928f63f77a5077718bd1c89c 185 Pfam PF12724 Flavodoxin domain 61 156 8.5E-9 T 23-04-2016 IPR026816 Flavodoxin domain CLI_RS05340 89cbf32c928f63f77a5077718bd1c89c 185 SUPERFAMILY SSF52218 52 183 7.3E-20 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS05340 89cbf32c928f63f77a5077718bd1c89c 185 Gene3D G3DSA:3.40.50.360 50 157 6.4E-20 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 SUPERFAMILY SSF46689 537 628 6.05E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 SUPERFAMILY SSF52540 322 555 6.27E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 SMART SM00382 343 487 5.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 SUPERFAMILY SSF55785 186 298 4.89E-11 T 23-04-2016 IPR000014 PAS domain CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 410 425 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 Gene3D G3DSA:3.40.50.300 319 496 4.5E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 Gene3D G3DSA:1.10.10.60 579 628 2.4E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 Pfam PF02954 Bacterial regulatory protein, Fis family 585 626 7.0E-14 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 347 360 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 Pfam PF00989 PAS fold 198 301 1.8E-6 T 23-04-2016 IPR013767 PAS fold GO:0006355 CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 PANTHER PTHR32071:SF27 120 628 2.2E-164 T 23-04-2016 CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 Gene3D G3DSA:3.30.450.20 196 303 4.6E-12 T 23-04-2016 CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 Gene3D G3DSA:1.10.8.60 497 557 9.0E-18 T 23-04-2016 CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 592 609 5.4E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 609 629 5.4E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 Pfam PF00158 Sigma-54 interaction domain 323 490 8.4E-71 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS14470 4d789ca79ad342162098675cf893dc06 632 PANTHER PTHR32071 120 628 2.2E-164 T 23-04-2016 CLI_RS08710 bcc5c3cee70db0e2179fb0bd038eaa09 284 PANTHER PTHR26402 4 126 5.7E-33 T 23-04-2016 CLI_RS08710 bcc5c3cee70db0e2179fb0bd038eaa09 284 Gene3D G3DSA:3.40.50.2300 2 125 9.5E-34 T 23-04-2016 CLI_RS08710 bcc5c3cee70db0e2179fb0bd038eaa09 284 Pfam PF13690 Chemotaxis phosphatase CheX 170 256 1.6E-14 T 23-04-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- CLI_RS08710 bcc5c3cee70db0e2179fb0bd038eaa09 284 SMART SM00448 4 116 3.0E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS08710 bcc5c3cee70db0e2179fb0bd038eaa09 284 Pfam PF00072 Response regulator receiver domain 6 116 1.5E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS08710 bcc5c3cee70db0e2179fb0bd038eaa09 284 SUPERFAMILY SSF103039 131 279 3.01E-22 T 23-04-2016 IPR028976 CheC-like domain CLI_RS08710 bcc5c3cee70db0e2179fb0bd038eaa09 284 SUPERFAMILY SSF52172 1 128 3.27E-33 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS08710 bcc5c3cee70db0e2179fb0bd038eaa09 284 Gene3D G3DSA:3.40.1550.10 131 281 4.3E-23 T 23-04-2016 IPR028976 CheC-like domain CLI_RS06120 ed8eb1e620970546aa12e2228d3da90f 309 Gene3D G3DSA:3.40.50.1100 2 45 1.4E-77 T 23-04-2016 CLI_RS06120 ed8eb1e620970546aa12e2228d3da90f 309 Gene3D G3DSA:3.40.50.1100 153 309 1.4E-77 T 23-04-2016 CLI_RS06120 ed8eb1e620970546aa12e2228d3da90f 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CLI_RS06120 ed8eb1e620970546aa12e2228d3da90f 309 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 308 8.2E-141 T 23-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CLI_RS06120 ed8eb1e620970546aa12e2228d3da90f 309 SUPERFAMILY SSF53686 3 307 9.04E-104 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS06120 ed8eb1e620970546aa12e2228d3da90f 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 297 1.5E-69 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS06120 ed8eb1e620970546aa12e2228d3da90f 309 PANTHER PTHR10314:SF110 2 309 1.4E-171 T 23-04-2016 CLI_RS06120 ed8eb1e620970546aa12e2228d3da90f 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 308 1.1E-136 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CLI_RS06120 ed8eb1e620970546aa12e2228d3da90f 309 PANTHER PTHR10314 2 309 1.4E-171 T 23-04-2016 CLI_RS06120 ed8eb1e620970546aa12e2228d3da90f 309 Gene3D G3DSA:3.40.50.1100 46 147 1.5E-41 T 23-04-2016 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 321 36.835 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 SUPERFAMILY SSF48179 178 330 8.67E-56 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 PANTHER PTHR11728 5 332 1.8E-145 T 23-04-2016 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 179 316 2.3E-53 T 23-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 PIRSF PIRSF000114 1 331 1.3E-110 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 132 152 2.5E-43 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 57 84 2.5E-43 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 172 196 2.5E-43 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 2.5E-43 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 237 254 2.5E-43 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 197 221 2.5E-43 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 Gene3D G3DSA:1.10.1040.10 183 325 5.1E-57 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 Gene3D G3DSA:3.40.50.720 3 182 3.7E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 158 2.6E-55 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 SUPERFAMILY SSF51735 5 177 1.64E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS12610 a6eb851693110ddf812808c53fb96861 332 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 187 208 - T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CLI_RS14145 5d3394ffdfa8532d8d11aaa18290bc3f 383 SUPERFAMILY SSF47203 227 380 1.13E-58 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLI_RS14145 5d3394ffdfa8532d8d11aaa18290bc3f 383 PIRSF PIRSF016578 3 382 2.3E-25 T 23-04-2016 CLI_RS14145 5d3394ffdfa8532d8d11aaa18290bc3f 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.7E-25 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CLI_RS14145 5d3394ffdfa8532d8d11aaa18290bc3f 383 PANTHER PTHR10909:SF305 1 383 2.7E-207 T 23-04-2016 CLI_RS14145 5d3394ffdfa8532d8d11aaa18290bc3f 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLI_RS14145 5d3394ffdfa8532d8d11aaa18290bc3f 383 PANTHER PTHR10909 1 383 2.7E-207 T 23-04-2016 CLI_RS14145 5d3394ffdfa8532d8d11aaa18290bc3f 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 5.6E-51 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLI_RS14145 5d3394ffdfa8532d8d11aaa18290bc3f 383 Gene3D G3DSA:1.10.540.10 2 120 4.3E-41 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CLI_RS14145 5d3394ffdfa8532d8d11aaa18290bc3f 383 SUPERFAMILY SSF56645 7 242 4.06E-86 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CLI_RS14145 5d3394ffdfa8532d8d11aaa18290bc3f 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 3.7E-37 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CLI_RS14145 5d3394ffdfa8532d8d11aaa18290bc3f 383 Gene3D G3DSA:2.40.110.10 121 221 3.4E-41 T 23-04-2016 CLI_RS14145 5d3394ffdfa8532d8d11aaa18290bc3f 383 Gene3D G3DSA:1.20.140.10 222 380 1.5E-72 T 23-04-2016 CLI_RS11085 8ff8dcfb0e68bc7c2fff0c3214016346 216 Gene3D G3DSA:3.40.50.360 5 126 9.8E-4 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS11085 8ff8dcfb0e68bc7c2fff0c3214016346 216 SUPERFAMILY SSF52218 5 136 5.7E-9 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS08130 4a621435d1467d184ab0ecc61b89e1ab 235 SMART SM00382 30 214 1.6E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS08130 4a621435d1467d184ab0ecc61b89e1ab 235 Gene3D G3DSA:3.40.50.300 2 209 3.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08130 4a621435d1467d184ab0ecc61b89e1ab 235 TIGRFAM TIGR03740 galliderm_ABC: lantibiotic protection ABC transporter, ATP-binding subunit 6 228 6.5E-121 T 23-04-2016 IPR022501 Gallidermin ABC transporter, ATP-binding subunit CLI_RS08130 4a621435d1467d184ab0ecc61b89e1ab 235 PANTHER PTHR24220:SF453 7 214 9.3E-115 T 23-04-2016 CLI_RS08130 4a621435d1467d184ab0ecc61b89e1ab 235 SUPERFAMILY SSF52540 4 210 8.28E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08130 4a621435d1467d184ab0ecc61b89e1ab 235 Pfam PF00005 ABC transporter 21 158 1.1E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS08130 4a621435d1467d184ab0ecc61b89e1ab 235 PANTHER PTHR24220 7 214 9.3E-115 T 23-04-2016 CLI_RS03860 e5c2af2f3916363a4782a05c6639b704 332 SUPERFAMILY SSF53901 4 332 4.23E-33 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS03860 e5c2af2f3916363a4782a05c6639b704 332 PANTHER PTHR34069:SF2 1 332 9.7E-102 T 23-04-2016 CLI_RS03860 e5c2af2f3916363a4782a05c6639b704 332 Gene3D G3DSA:3.40.47.10 1 169 3.3E-30 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS03860 e5c2af2f3916363a4782a05c6639b704 332 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 111 188 1.1E-10 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CLI_RS03860 e5c2af2f3916363a4782a05c6639b704 332 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 243 332 4.6E-19 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CLI_RS03860 e5c2af2f3916363a4782a05c6639b704 332 Gene3D G3DSA:3.40.47.10 170 331 3.0E-23 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS03860 e5c2af2f3916363a4782a05c6639b704 332 PANTHER PTHR34069 1 332 9.7E-102 T 23-04-2016 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 Gene3D G3DSA:3.30.56.20 405 478 8.3E-22 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 SUPERFAMILY SSF56037 204 399 3.66E-69 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 786 42.77 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 SMART SM00874 406 474 3.9E-24 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 Gene3D G3DSA:2.40.50.140 41 155 2.7E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 Pfam PF03147 Ferredoxin-fold anticodon binding domain 699 792 1.1E-32 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 PANTHER PTHR10947:SF0 2 792 0.0 T 23-04-2016 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 PANTHER PTHR10947 2 792 0.0 T 23-04-2016 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 SMART SM00896 699 792 1.4E-49 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 Gene3D G3DSA:3.30.56.10 157 186 1.5E-22 T 23-04-2016 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 Gene3D G3DSA:3.30.56.10 1 38 1.5E-22 T 23-04-2016 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 Gene3D G3DSA:3.50.40.10 203 399 7.7E-82 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 Pfam PF03483 B3/4 domain 217 387 1.7E-67 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 Gene3D G3DSA:3.30.930.10 491 687 4.6E-61 T 23-04-2016 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 SUPERFAMILY SSF46955 406 478 3.75E-19 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 Pfam PF03484 tRNA synthetase B5 domain 410 474 2.6E-16 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 SUPERFAMILY SSF55681 470 686 3.63E-48 T 23-04-2016 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 SUPERFAMILY SSF54991 695 792 2.09E-33 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 Gene3D G3DSA:3.30.70.380 701 792 1.8E-35 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 792 3.6E-276 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 Pfam PF01588 Putative tRNA binding domain 45 147 7.3E-21 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 SUPERFAMILY SSF50249 41 192 1.18E-44 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15600 033f824b95a008c5ef75659157f8189c 793 SMART SM00873 216 389 4.1E-89 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CLI_RS06990 e278b1196c65d327d4a1cc9a52338633 332 Gene3D G3DSA:1.10.3470.10 2 331 1.4E-108 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS06990 e278b1196c65d327d4a1cc9a52338633 332 PANTHER PTHR30472:SF3 1 332 4.4E-154 T 23-04-2016 CLI_RS06990 e278b1196c65d327d4a1cc9a52338633 332 SUPERFAMILY SSF81345 4 328 1.96E-84 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS06990 e278b1196c65d327d4a1cc9a52338633 332 PANTHER PTHR30472 1 332 4.4E-154 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS06990 e278b1196c65d327d4a1cc9a52338633 332 Pfam PF01032 FecCD transport family 14 328 3.8E-98 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS18295 4b49686b33e26c0ce64e88d92334ccd9 449 Gene3D G3DSA:3.40.50.1780 222 334 8.6E-41 T 23-04-2016 CLI_RS18295 4b49686b33e26c0ce64e88d92334ccd9 449 Gene3D G3DSA:3.40.50.1780 122 177 8.6E-41 T 23-04-2016 CLI_RS18295 4b49686b33e26c0ce64e88d92334ccd9 449 PANTHER PTHR11615 78 449 5.6E-157 T 23-04-2016 CLI_RS18295 4b49686b33e26c0ce64e88d92334ccd9 449 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 120 131 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS18295 4b49686b33e26c0ce64e88d92334ccd9 449 PANTHER PTHR11615:SF158 78 449 5.6E-157 T 23-04-2016 CLI_RS18295 4b49686b33e26c0ce64e88d92334ccd9 449 SUPERFAMILY SSF54862 93 139 6.14E-14 T 23-04-2016 CLI_RS18295 4b49686b33e26c0ce64e88d92334ccd9 449 Pfam PF00037 4Fe-4S binding domain 114 135 1.3E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS18295 4b49686b33e26c0ce64e88d92334ccd9 449 Gene3D G3DSA:3.30.70.20 69 121 3.0E-10 T 23-04-2016 CLI_RS18295 4b49686b33e26c0ce64e88d92334ccd9 449 SUPERFAMILY SSF53920 119 423 1.12E-74 T 23-04-2016 IPR009016 Iron hydrogenase CLI_RS18295 4b49686b33e26c0ce64e88d92334ccd9 449 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 154 390 1.2E-60 T 23-04-2016 IPR004108 Iron hydrogenase, large subunit, C-terminal CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 7 428 6.9E-213 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 Gene3D G3DSA:3.20.20.120 133 428 1.5E-137 T 23-04-2016 IPR029065 Enolase C-terminal domain-like CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 Pfam PF03952 Enolase, N-terminal domain 7 137 6.3E-61 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 Gene3D G3DSA:3.30.390.10 7 129 2.5E-56 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 PIRSF PIRSF001400 3 428 1.5E-192 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 SMART SM01193 7 137 1.0E-97 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 Hamap MF_00318 Enolase [eno]. 5 414 45.3 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 143 426 8.1E-136 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 SUPERFAMILY SSF51604 141 428 1.5E-132 T 23-04-2016 IPR029065 Enolase C-terminal domain-like CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 PANTHER PTHR11902 7 428 3.8E-270 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 SUPERFAMILY SSF54826 6 141 2.92E-57 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 SMART SM01192 142 428 1.3E-227 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 ProSitePatterns PS00164 Enolase signature. 337 350 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 PRINTS PR00148 Enolase signature 164 177 3.8E-47 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 PRINTS PR00148 Enolase signature 110 126 3.8E-47 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 PRINTS PR00148 Enolase signature 40 54 3.8E-47 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 PRINTS PR00148 Enolase signature 337 351 3.8E-47 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 PRINTS PR00148 Enolase signature 366 383 3.8E-47 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS01315 e51853a82dfcebe8ce020dfb8372570d 431 PRINTS PR00148 Enolase signature 314 325 3.8E-47 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS09820 b407c73536b5b58a96009626624686bf 319 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 319 6.3E-114 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS09820 b407c73536b5b58a96009626624686bf 319 SMART SM00729 10 214 1.5E-11 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS09820 b407c73536b5b58a96009626624686bf 319 Pfam PF13353 4Fe-4S single cluster domain 17 120 9.4E-8 T 23-04-2016 CLI_RS09820 b407c73536b5b58a96009626624686bf 319 Pfam PF06463 Molybdenum Cofactor Synthesis C 181 301 2.3E-32 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS09820 b407c73536b5b58a96009626624686bf 319 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 1 319 37.161 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS09820 b407c73536b5b58a96009626624686bf 319 PANTHER PTHR22960 1 275 1.4E-121 T 23-04-2016 CLI_RS09820 b407c73536b5b58a96009626624686bf 319 Gene3D G3DSA:3.20.20.70 2 296 1.2E-77 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS09820 b407c73536b5b58a96009626624686bf 319 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 16 27 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS09820 b407c73536b5b58a96009626624686bf 319 SUPERFAMILY SSF102114 3 279 4.84E-74 T 23-04-2016 CLI_RS09820 b407c73536b5b58a96009626624686bf 319 Pfam PF04055 Radical SAM superfamily 14 175 2.7E-32 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS10730 168caf65f70ad131d2c21a53b5333f3c 340 SUPERFAMILY SSF51735 137 306 1.48E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS10730 168caf65f70ad131d2c21a53b5333f3c 340 Gene3D G3DSA:3.90.180.10 1 174 1.3E-36 T 23-04-2016 IPR011032 GroES-like CLI_RS10730 168caf65f70ad131d2c21a53b5333f3c 340 PANTHER PTHR11695 12 337 1.9E-92 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CLI_RS10730 168caf65f70ad131d2c21a53b5333f3c 340 SUPERFAMILY SSF50129 1 174 2.52E-29 T 23-04-2016 IPR011032 GroES-like CLI_RS10730 168caf65f70ad131d2c21a53b5333f3c 340 PANTHER PTHR11695:SF38 12 337 1.9E-92 T 23-04-2016 CLI_RS10730 168caf65f70ad131d2c21a53b5333f3c 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 8.2E-22 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLI_RS10730 168caf65f70ad131d2c21a53b5333f3c 340 Gene3D G3DSA:3.40.50.720 175 288 2.6E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS10730 168caf65f70ad131d2c21a53b5333f3c 340 Pfam PF16912 Glucose dehydrogenase C-terminus 143 339 8.9E-12 T 23-04-2016 IPR031640 Glucose dehydrogenase, C-terminal KEGG: 00030+1.1.1.47 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 SMART SM00433 40 650 2.8E-261 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 ProSitePatterns PS00177 DNA topoisomerase II signature. 443 451 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PANTHER PTHR10169:SF44 19 645 5.8E-244 T 23-04-2016 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 SUPERFAMILY SSF55874 12 233 6.42E-62 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 Gene3D G3DSA:3.30.565.10 22 231 3.2E-80 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 586 645 1.6E-27 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 SMART SM00387 36 191 7.8E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 190 2.7E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR00418 DNA topoisomerase II family signature 75 88 1.8E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR00418 DNA topoisomerase II family signature 40 55 1.8E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR00418 DNA topoisomerase II family signature 545 557 1.8E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR00418 DNA topoisomerase II family signature 289 302 1.8E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR00418 DNA topoisomerase II family signature 589 605 1.8E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR00418 DNA topoisomerase II family signature 441 455 1.8E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR00418 DNA topoisomerase II family signature 118 132 1.8E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR00418 DNA topoisomerase II family signature 507 523 1.8E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR00418 DNA topoisomerase II family signature 525 542 1.8E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 Pfam PF00204 DNA gyrase B 238 411 8.9E-53 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 Pfam PF01751 Toprim domain 441 549 1.5E-16 T 23-04-2016 IPR006171 Toprim domain CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 SUPERFAMILY SSF56719 421 648 1.94E-73 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 Gene3D G3DSA:3.40.50.670 426 639 1.7E-76 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR01159 DNA gyrase subunit B signature 395 415 2.9E-45 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR01159 DNA gyrase subunit B signature 381 395 2.9E-45 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR01159 DNA gyrase subunit B signature 211 224 2.9E-45 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR01159 DNA gyrase subunit B signature 196 211 2.9E-45 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR01159 DNA gyrase subunit B signature 333 349 2.9E-45 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR01159 DNA gyrase subunit B signature 610 622 2.9E-45 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR01159 DNA gyrase subunit B signature 237 259 2.9E-45 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR01159 DNA gyrase subunit B signature 11 21 2.9E-45 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR01159 DNA gyrase subunit B signature 491 500 2.9E-45 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PRINTS PR01159 DNA gyrase subunit B signature 626 642 2.9E-45 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 PANTHER PTHR10169 19 645 5.8E-244 T 23-04-2016 CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 Gene3D G3DSA:3.30.230.10 238 411 1.6E-53 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS13780 6762a5b659e2aa6be9cc5e3a82081e24 651 SUPERFAMILY SSF54211 238 411 4.55E-46 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 110 5.8E-45 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 PANTHER PTHR18866 1 443 0.0 T 23-04-2016 CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 Gene3D G3DSA:3.30.470.20 203 444 1.9E-102 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 SUPERFAMILY SSF52440 1 111 5.11E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 SMART SM00878 336 442 1.2E-60 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 SUPERFAMILY SSF51246 331 445 3.77E-43 T 23-04-2016 IPR011054 Rudiment single hybrid motif CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 Gene3D G3DSA:3.30.1490.20 130 202 3.8E-31 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 SUPERFAMILY SSF56059 83 348 6.06E-74 T 23-04-2016 CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 2 446 2.6E-227 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 9.3E-38 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 Gene3D G3DSA:3.40.50.20 2 129 3.8E-50 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS18540 8c5767a5bb3a7133783d1f1ab7db5398 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 1.1E-82 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLI_RS08255 6402b6c9905a6ce89c62f73d60dbe565 111 SUPERFAMILY SSF102705 5 109 4.32E-16 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLI_RS08255 6402b6c9905a6ce89c62f73d60dbe565 111 Pfam PF03091 CutA1 divalent ion tolerance protein 63 106 4.5E-5 T 23-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CLI_RS08255 6402b6c9905a6ce89c62f73d60dbe565 111 PANTHER PTHR41774:SF2 1 108 9.9E-87 T 23-04-2016 CLI_RS08255 6402b6c9905a6ce89c62f73d60dbe565 111 PANTHER PTHR41774 1 108 9.9E-87 T 23-04-2016 CLI_RS08255 6402b6c9905a6ce89c62f73d60dbe565 111 Gene3D G3DSA:3.30.70.830 4 107 1.1E-31 T 23-04-2016 CLI_RS14590 ab81e7c63884cfa6c6077cdfdfbf0687 439 PANTHER PTHR22777:SF8 1 432 1.3E-187 T 23-04-2016 CLI_RS14590 ab81e7c63884cfa6c6077cdfdfbf0687 439 PANTHER PTHR22777 1 432 1.3E-187 T 23-04-2016 CLI_RS14590 ab81e7c63884cfa6c6077cdfdfbf0687 439 SMART SM01091 357 437 7.8E-26 T 23-04-2016 IPR005170 Transporter-associated domain CLI_RS14590 ab81e7c63884cfa6c6077cdfdfbf0687 439 Gene3D G3DSA:3.10.580.10 207 350 4.4E-20 T 23-04-2016 CLI_RS14590 ab81e7c63884cfa6c6077cdfdfbf0687 439 Pfam PF03471 Transporter associated domain 358 436 1.8E-23 T 23-04-2016 IPR005170 Transporter-associated domain CLI_RS14590 ab81e7c63884cfa6c6077cdfdfbf0687 439 Pfam PF01595 Domain of unknown function DUF21 16 206 1.0E-48 T 23-04-2016 IPR002550 Domain of unknown function DUF21 CLI_RS14590 ab81e7c63884cfa6c6077cdfdfbf0687 439 SMART SM00116 294 342 24.0 T 23-04-2016 IPR000644 CBS domain CLI_RS14590 ab81e7c63884cfa6c6077cdfdfbf0687 439 SMART SM00116 230 279 0.68 T 23-04-2016 IPR000644 CBS domain CLI_RS14590 ab81e7c63884cfa6c6077cdfdfbf0687 439 SUPERFAMILY SSF54631 216 361 2.78E-32 T 23-04-2016 CLI_RS14590 ab81e7c63884cfa6c6077cdfdfbf0687 439 SUPERFAMILY SSF56176 355 435 8.45E-22 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLI_RS14590 ab81e7c63884cfa6c6077cdfdfbf0687 439 Gene3D G3DSA:3.30.465.10 351 436 1.6E-29 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLI_RS02370 66d0ed9ce2a66722d70b66281578e1d9 275 SUPERFAMILY SSF51621 3 264 2.0E-110 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLI_RS02370 66d0ed9ce2a66722d70b66281578e1d9 275 Gene3D G3DSA:3.20.20.60 2 265 1.8E-121 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLI_RS02370 66d0ed9ce2a66722d70b66281578e1d9 275 PANTHER PTHR20881 2 275 3.3E-164 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CLI_RS02370 66d0ed9ce2a66722d70b66281578e1d9 275 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 264 44.431 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CLI_RS02370 66d0ed9ce2a66722d70b66281578e1d9 275 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 260 3.3E-119 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CLI_RS02370 66d0ed9ce2a66722d70b66281578e1d9 275 PIRSF PIRSF000388 1 267 2.7E-115 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CLI_RS02370 66d0ed9ce2a66722d70b66281578e1d9 275 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 4 265 9.0E-108 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CLI_RS07465 bc83f634ec0b78142b5266b9909f5506 278 PANTHER PTHR32179 1 273 2.8E-128 T 23-04-2016 CLI_RS07465 bc83f634ec0b78142b5266b9909f5506 278 PIRSF PIRSF006250 2 276 5.2E-97 T 23-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CLI_RS07465 bc83f634ec0b78142b5266b9909f5506 278 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 273 7.5E-105 T 23-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 CLI_RS07465 bc83f634ec0b78142b5266b9909f5506 278 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 19 106 3.5E-29 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 CLI_RS07465 bc83f634ec0b78142b5266b9909f5506 278 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 108 273 2.5E-62 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CLI_RS07465 bc83f634ec0b78142b5266b9909f5506 278 SUPERFAMILY SSF51690 108 273 3.92E-60 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CLI_RS07465 bc83f634ec0b78142b5266b9909f5506 278 Gene3D G3DSA:3.90.1170.20 2 128 8.6E-48 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 CLI_RS07465 bc83f634ec0b78142b5266b9909f5506 278 SUPERFAMILY SSF54675 1 107 8.24E-29 T 23-04-2016 CLI_RS07465 bc83f634ec0b78142b5266b9909f5506 278 Gene3D G3DSA:3.20.20.70 129 264 1.9E-60 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 7 316 42.031 T 23-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 PANTHER PTHR11540 5 314 6.2E-154 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 2.5E-46 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 PRINTS PR00086 L-lactate dehydrogenase signature 9 33 2.5E-46 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 2.5E-46 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 2.5E-46 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 PRINTS PR00086 L-lactate dehydrogenase signature 34 58 2.5E-46 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 23-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 Gene3D G3DSA:3.90.110.10 149 314 1.4E-57 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 PIRSF PIRSF000102 4 317 1.9E-109 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 12 310 9.4E-124 T 23-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 SUPERFAMILY SSF51735 4 146 9.04E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 PANTHER PTHR11540:SF3 5 314 6.2E-154 T 23-04-2016 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 146 1.5E-46 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 Gene3D G3DSA:3.40.50.720 4 148 4.9E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 314 1.0E-34 T 23-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CLI_RS07805 cbdf0a3446c2a0a1b746c2bb5a19e971 318 SUPERFAMILY SSF56327 147 313 3.63E-56 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLI_RS17730 2c76cce04d95f7221b009c801e947288 249 SUPERFAMILY SSF55920 1 247 3.14E-87 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS17730 2c76cce04d95f7221b009c801e947288 249 PANTHER PTHR10804 1 247 3.6E-137 T 23-04-2016 CLI_RS17730 2c76cce04d95f7221b009c801e947288 249 Gene3D G3DSA:3.90.230.10 1 247 4.2E-90 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS17730 2c76cce04d95f7221b009c801e947288 249 Hamap MF_01974 Methionine aminopeptidase [map]. 2 249 41.271 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CLI_RS17730 2c76cce04d95f7221b009c801e947288 249 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 6.1E-98 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CLI_RS17730 2c76cce04d95f7221b009c801e947288 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 1.0E-20 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CLI_RS17730 2c76cce04d95f7221b009c801e947288 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.0E-20 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CLI_RS17730 2c76cce04d95f7221b009c801e947288 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 1.0E-20 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CLI_RS17730 2c76cce04d95f7221b009c801e947288 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 1.0E-20 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CLI_RS17730 2c76cce04d95f7221b009c801e947288 249 PANTHER PTHR10804:SF41 1 247 3.6E-137 T 23-04-2016 CLI_RS17730 2c76cce04d95f7221b009c801e947288 249 Pfam PF00557 Metallopeptidase family M24 12 238 9.0E-50 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS17730 2c76cce04d95f7221b009c801e947288 249 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 166 184 - T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 4 228 9.1E-121 T 23-04-2016 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 PANTHER PTHR30603 33 234 1.3E-108 T 23-04-2016 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 PANTHER PTHR30603:SF22 33 234 1.3E-108 T 23-04-2016 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 Pfam PF04542 Sigma-70 region 2 54 123 2.1E-16 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 PIRSF PIRSF000770 4 233 8.6E-68 T 23-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 SUPERFAMILY SSF88946 21 124 1.26E-33 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 Pfam PF04545 Sigma-70, region 4 177 225 3.5E-15 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 Gene3D G3DSA:1.10.601.10 30 121 2.8E-30 T 23-04-2016 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 Gene3D G3DSA:1.10.10.10 175 228 1.3E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 198 224 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 PRINTS PR00046 Major sigma-70 factor signature 78 91 2.7E-13 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 PRINTS PR00046 Major sigma-70 factor signature 177 189 2.7E-13 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 PRINTS PR00046 Major sigma-70 factor signature 198 213 2.7E-13 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 PRINTS PR00046 Major sigma-70 factor signature 213 224 2.7E-13 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 228 2.1E-28 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12720 a157d4719b4cf5d2d76f192b9187a134 234 SUPERFAMILY SSF88659 137 229 3.71E-18 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 256 410 3.7E-44 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 SUPERFAMILY SSF55486 251 571 7.69E-82 T 23-04-2016 CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 Pfam PF03413 Peptidase propeptide and YPEB domain 148 212 2.4E-6 T 23-04-2016 IPR025711 PepSY domain CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 Gene3D G3DSA:1.10.390.10 415 571 5.4E-53 T 23-04-2016 CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 PANTHER PTHR33794 2 578 8.8E-197 T 23-04-2016 CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 85 133 6.6E-6 T 23-04-2016 IPR011096 FTP domain CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 PANTHER PTHR33794:SF1 2 578 8.8E-197 T 23-04-2016 CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 422 433 2.4E-18 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 401 417 2.4E-18 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 363 383 2.4E-18 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 489 505 2.4E-18 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 413 571 1.4E-52 T 23-04-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 CLI_RS07460 d0d15db2e1479219fdd8ce52351b3c61 579 Gene3D G3DSA:3.10.170.10 255 413 1.3E-45 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 CLI_RS08815 37efd75459fce541c91826e23f1f19bb 217 PANTHER PTHR21299 6 216 3.8E-73 T 23-04-2016 CLI_RS08815 37efd75459fce541c91826e23f1f19bb 217 Hamap MF_00238 Cytidylate kinase [cmk]. 4 217 32.514 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CLI_RS08815 37efd75459fce541c91826e23f1f19bb 217 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 212 8.7E-78 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CLI_RS08815 37efd75459fce541c91826e23f1f19bb 217 Gene3D G3DSA:3.40.50.300 4 215 4.2E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08815 37efd75459fce541c91826e23f1f19bb 217 SUPERFAMILY SSF52540 1 215 2.32E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08815 37efd75459fce541c91826e23f1f19bb 217 Pfam PF02224 Cytidylate kinase 6 215 8.2E-79 T 23-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 Pfam PF00672 HAMP domain 174 242 2.0E-15 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 SUPERFAMILY SSF55874 302 467 4.58E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 SMART SM00304 194 246 4.6E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 Gene3D G3DSA:3.30.450.20 32 164 7.9E-9 T 23-04-2016 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 467 4.6E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 313 1.3E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 PANTHER PTHR24423 45 123 4.0E-87 T 23-04-2016 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 PANTHER PTHR24423 188 469 4.0E-87 T 23-04-2016 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 Gene3D G3DSA:3.30.565.10 300 468 2.5E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 SUPERFAMILY SSF47384 230 314 9.61E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 SMART SM00387 359 469 6.1E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 467 1.8E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 1.8E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 1.8E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 1.8E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 Gene3D G3DSA:1.10.287.130 237 299 1.1E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 PANTHER PTHR24423:SF394 45 123 4.0E-87 T 23-04-2016 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 PANTHER PTHR24423:SF394 188 469 4.0E-87 T 23-04-2016 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 SUPERFAMILY SSF158472 194 243 2.62E-11 T 23-04-2016 CLI_RS18250 e3912754a3c6bf92fdf2952f516e62a7 469 SMART SM00388 247 313 2.0E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS08875 301813a901131d752bbff698f3f40935 143 Gene3D G3DSA:3.40.30.10 40 140 6.4E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS08875 301813a901131d752bbff698f3f40935 143 PANTHER PTHR10438 55 140 1.3E-18 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLI_RS08875 301813a901131d752bbff698f3f40935 143 Pfam PF00085 Thioredoxin 46 139 1.4E-17 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 CLI_RS08875 301813a901131d752bbff698f3f40935 143 SUPERFAMILY SSF52833 47 140 4.96E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS08875 301813a901131d752bbff698f3f40935 143 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 Gene3D G3DSA:3.40.50.10380 5 157 7.5E-59 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 PIRSF PIRSF000106 19 390 6.0E-87 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 Gene3D G3DSA:3.40.50.720 158 390 6.6E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 Pfam PF03949 Malic enzyme, NAD binding domain 162 382 2.9E-24 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 SMART SM00919 160 383 1.4E-125 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 SUPERFAMILY SSF51735 160 389 2.79E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 PRINTS PR00072 Malic enzyme signature 187 203 5.7E-9 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 PRINTS PR00072 Malic enzyme signature 77 99 5.7E-9 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 PRINTS PR00072 Malic enzyme signature 156 172 5.7E-9 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 PANTHER PTHR23406 1 390 1.3E-251 T 23-04-2016 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 PANTHER PTHR23406:SF23 1 390 1.3E-251 T 23-04-2016 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 Pfam PF00390 Malic enzyme, N-terminal domain 17 148 8.0E-33 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 SMART SM01274 15 148 7.6E-90 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLI_RS01440 5a0ce6518feed558257f81fbc6fb83fb 390 SUPERFAMILY SSF53223 7 158 1.22E-58 T 23-04-2016 CLI_RS05040 d768d3c7f9ad159d4d2ce99864d64a8d 279 PANTHER PTHR20861:SF5 57 194 5.9E-24 T 23-04-2016 CLI_RS05040 d768d3c7f9ad159d4d2ce99864d64a8d 279 Gene3D G3DSA:3.30.230.10 65 122 3.7E-10 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS05040 d768d3c7f9ad159d4d2ce99864d64a8d 279 PANTHER PTHR20861 57 194 5.9E-24 T 23-04-2016 CLI_RS05040 d768d3c7f9ad159d4d2ce99864d64a8d 279 Pfam PF00288 GHMP kinases N terminal domain 74 120 9.5E-8 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 CLI_RS05040 d768d3c7f9ad159d4d2ce99864d64a8d 279 PIRSF PIRSF033887 1 276 1.9E-80 T 23-04-2016 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00040+2.7.1.17|KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443|UniPathway: UPA00148 CLI_RS05040 d768d3c7f9ad159d4d2ce99864d64a8d 279 SUPERFAMILY SSF54211 1 141 1.37E-18 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS03430 f86e98d1a5cc4bf202be90dfd2e436b9 425 SUPERFAMILY SSF52540 75 361 2.62E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03430 f86e98d1a5cc4bf202be90dfd2e436b9 425 PANTHER PTHR24031 1 393 2.2E-192 T 23-04-2016 CLI_RS03430 f86e98d1a5cc4bf202be90dfd2e436b9 425 Pfam PF00270 DEAD/DEAH box helicase 25 197 5.8E-52 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLI_RS03430 f86e98d1a5cc4bf202be90dfd2e436b9 425 Pfam PF00271 Helicase conserved C-terminal domain 234 340 3.2E-27 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS03430 f86e98d1a5cc4bf202be90dfd2e436b9 425 SMART SM00487 20 223 9.3E-60 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS03430 f86e98d1a5cc4bf202be90dfd2e436b9 425 PANTHER PTHR24031:SF261 1 393 2.2E-192 T 23-04-2016 CLI_RS03430 f86e98d1a5cc4bf202be90dfd2e436b9 425 Gene3D G3DSA:3.40.50.300 213 372 7.4E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03430 f86e98d1a5cc4bf202be90dfd2e436b9 425 SMART SM00490 259 340 4.9E-32 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS03430 f86e98d1a5cc4bf202be90dfd2e436b9 425 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLI_RS03430 f86e98d1a5cc4bf202be90dfd2e436b9 425 Gene3D G3DSA:3.40.50.300 3 212 6.0E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 PANTHER PTHR11732 1 276 1.3E-92 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 PANTHER PTHR11732:SF150 1 276 1.3E-92 T 23-04-2016 CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 SUPERFAMILY SSF46548 253 332 1.78E-8 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 Gene3D G3DSA:3.20.20.100 201 254 2.2E-5 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 Gene3D G3DSA:3.20.20.100 1 199 1.9E-46 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 Pfam PF13534 4Fe-4S dicluster domain 258 322 7.5E-11 T 23-04-2016 CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 PRINTS PR00069 Aldo-keto reductase signature 127 144 7.66E-6 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 PRINTS PR00069 Aldo-keto reductase signature 90 108 7.66E-6 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 PRINTS PR00069 Aldo-keto reductase signature 38 62 7.66E-6 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 Pfam PF00248 Aldo/keto reductase family 19 198 7.8E-35 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 Gene3D G3DSA:1.10.1060.10 255 334 1.1E-8 T 23-04-2016 CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 SUPERFAMILY SSF51430 1 279 1.7E-61 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS17295 9782d68465e29eb406a2cd1345bc9727 336 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 307 318 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS00925 1198c18d1e5337a278c5f66cb9f1982b 133 SUPERFAMILY SSF46604 88 132 6.02E-8 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CLI_RS00925 1198c18d1e5337a278c5f66cb9f1982b 133 PANTHER PTHR13822 1 133 1.9E-32 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00925 1198c18d1e5337a278c5f66cb9f1982b 133 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 1.0E-13 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CLI_RS00925 1198c18d1e5337a278c5f66cb9f1982b 133 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 130 17.589 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00925 1198c18d1e5337a278c5f66cb9f1982b 133 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 83 9.8E-19 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00925 1198c18d1e5337a278c5f66cb9f1982b 133 Gene3D G3DSA:1.20.5.440 92 132 2.9E-14 T 23-04-2016 CLI_RS00925 1198c18d1e5337a278c5f66cb9f1982b 133 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 130 4.2E-26 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00925 1198c18d1e5337a278c5f66cb9f1982b 133 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 13 82 2.0E-9 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00925 1198c18d1e5337a278c5f66cb9f1982b 133 Gene3D G3DSA:2.60.15.10 4 91 3.0E-22 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS00925 1198c18d1e5337a278c5f66cb9f1982b 133 SUPERFAMILY SSF51344 4 84 9.42E-19 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CLI_RS07430 eec5dc47d8b484d6b368ca3ff04114c5 221 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 86 134 1.2E-4 T 23-04-2016 IPR011096 FTP domain CLI_RS07430 eec5dc47d8b484d6b368ca3ff04114c5 221 Pfam PF03413 Peptidase propeptide and YPEB domain 149 213 3.2E-5 T 23-04-2016 IPR025711 PepSY domain CLI_RS07430 eec5dc47d8b484d6b368ca3ff04114c5 221 PANTHER PTHR33794:SF1 2 219 8.7E-49 T 23-04-2016 CLI_RS07430 eec5dc47d8b484d6b368ca3ff04114c5 221 PANTHER PTHR33794 2 219 8.7E-49 T 23-04-2016 CLI_RS05890 7262892976562ac2f3fb7436c74a8b7a 314 PANTHER PTHR10996 1 302 1.9E-135 T 23-04-2016 CLI_RS05890 7262892976562ac2f3fb7436c74a8b7a 314 SUPERFAMILY SSF51735 101 280 5.87E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS05890 7262892976562ac2f3fb7436c74a8b7a 314 PANTHER PTHR10996:SF20 1 302 1.9E-135 T 23-04-2016 CLI_RS05890 7262892976562ac2f3fb7436c74a8b7a 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 279 7.3E-58 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLI_RS05890 7262892976562ac2f3fb7436c74a8b7a 314 Gene3D G3DSA:3.40.50.720 106 281 3.8E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS05890 7262892976562ac2f3fb7436c74a8b7a 314 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 302 9.4E-34 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CLI_RS05890 7262892976562ac2f3fb7436c74a8b7a 314 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 219 235 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLI_RS05890 7262892976562ac2f3fb7436c74a8b7a 314 Gene3D G3DSA:3.40.50.720 1 105 2.5E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS05890 7262892976562ac2f3fb7436c74a8b7a 314 SUPERFAMILY SSF52283 15 129 4.35E-33 T 23-04-2016 CLI_RS12940 cb02f27b6d8c5a480ed6b76b825f0dcd 285 Pfam PF00975 Thioesterase domain 5 276 3.0E-11 T 23-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 CLI_RS12940 cb02f27b6d8c5a480ed6b76b825f0dcd 285 PANTHER PTHR11487 203 285 7.8E-61 T 23-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 CLI_RS12940 cb02f27b6d8c5a480ed6b76b825f0dcd 285 PANTHER PTHR11487 2 164 7.8E-61 T 23-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 CLI_RS12940 cb02f27b6d8c5a480ed6b76b825f0dcd 285 SUPERFAMILY SSF53474 5 276 9.33E-19 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS12940 cb02f27b6d8c5a480ed6b76b825f0dcd 285 Gene3D G3DSA:3.40.50.1820 5 112 4.4E-17 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS12940 cb02f27b6d8c5a480ed6b76b825f0dcd 285 Gene3D G3DSA:3.40.50.1820 212 283 4.4E-17 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 293 7.8E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 Gene3D G3DSA:3.30.565.10 298 435 2.6E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 212 226 9.6E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 9.6E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 9.6E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 SUPERFAMILY SSF47384 212 294 3.92E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 Gene3D G3DSA:1.10.287.130 222 291 8.1E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 SUPERFAMILY SSF55874 300 435 6.16E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 SMART SM00388 229 296 1.1E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 SMART SM00387 342 448 8.6E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 437 2.4E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 PANTHER PTHR24423 170 433 7.6E-52 T 23-04-2016 CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 PANTHER PTHR24423 90 100 7.6E-52 T 23-04-2016 CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 PANTHER PTHR24423:SF526 170 433 7.6E-52 T 23-04-2016 CLI_RS17145 1debe4678a251653ec06ff45eb432e83 448 PANTHER PTHR24423:SF526 90 100 7.6E-52 T 23-04-2016 CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 PANTHER PTHR10169:SF44 1 270 6.7E-127 T 23-04-2016 CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 Gene3D G3DSA:3.30.230.10 181 270 3.3E-34 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 PRINTS PR01159 DNA gyrase subunit B signature 142 157 2.4E-23 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 PRINTS PR01159 DNA gyrase subunit B signature 157 170 2.4E-23 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 PRINTS PR01159 DNA gyrase subunit B signature 181 203 2.4E-23 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 Pfam PF00204 DNA gyrase B 182 269 1.5E-27 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 PRINTS PR00418 DNA topoisomerase II family signature 229 242 3.4E-19 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 PRINTS PR00418 DNA topoisomerase II family signature 75 89 3.4E-19 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 PRINTS PR00418 DNA topoisomerase II family signature 32 45 3.4E-19 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 PANTHER PTHR10169 1 270 6.7E-127 T 23-04-2016 CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 SMART SM00387 1 137 1.3E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 SMART SM00433 1 270 4.1E-20 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 SUPERFAMILY SSF54211 182 269 2.28E-27 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1 136 1.7E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 SUPERFAMILY SSF55874 1 179 1.57E-65 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS18890 54b08de2a350a3bb230d296ea2b431e4 270 Gene3D G3DSA:3.30.565.10 1 179 8.9E-77 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 PANTHER PTHR34819 3 987 1.4E-187 T 23-04-2016 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 Pfam PF01345 Domain of unknown function DUF11 592 664 9.5E-7 T 23-04-2016 IPR001434 Domain of unknown function DUF11 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 Pfam PF01345 Domain of unknown function DUF11 717 784 1.1E-11 T 23-04-2016 IPR001434 Domain of unknown function DUF11 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 Pfam PF01345 Domain of unknown function DUF11 487 538 9.6E-11 T 23-04-2016 IPR001434 Domain of unknown function DUF11 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 Pfam PF01345 Domain of unknown function DUF11 970 1041 6.1E-12 T 23-04-2016 IPR001434 Domain of unknown function DUF11 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 Pfam PF01345 Domain of unknown function DUF11 843 916 4.0E-10 T 23-04-2016 IPR001434 Domain of unknown function DUF11 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 Pfam PF01345 Domain of unknown function DUF11 347 409 4.6E-10 T 23-04-2016 IPR001434 Domain of unknown function DUF11 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 363 415 7.7E-16 T 23-04-2016 IPR001434 Domain of unknown function DUF11 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 623 669 4.8E-9 T 23-04-2016 IPR001434 Domain of unknown function DUF11 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1005 1041 4.1E-12 T 23-04-2016 IPR001434 Domain of unknown function DUF11 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 497 544 7.9E-11 T 23-04-2016 IPR001434 Domain of unknown function DUF11 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 748 795 8.1E-11 T 23-04-2016 IPR001434 Domain of unknown function DUF11 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 875 916 1.0E-11 T 23-04-2016 IPR001434 Domain of unknown function DUF11 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 PANTHER PTHR34819:SF3 3 987 1.4E-187 T 23-04-2016 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 SUPERFAMILY SSF117074 2 76 5.36E-12 T 23-04-2016 CLI_RS05550 71c492ba7e2bebaa436f46a836328031 1143 Gene3D G3DSA:2.60.40.10 8 64 5.3E-9 T 23-04-2016 IPR013783 Immunoglobulin-like fold CLI_RS16755 3885a201239692331fc4901c0c7ec2c0 238 PANTHER PTHR21600:SF19 3 238 2.5E-74 T 23-04-2016 CLI_RS16755 3885a201239692331fc4901c0c7ec2c0 238 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLI_RS16755 3885a201239692331fc4901c0c7ec2c0 238 PANTHER PTHR21600 3 238 2.5E-74 T 23-04-2016 CLI_RS16755 3885a201239692331fc4901c0c7ec2c0 238 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 229 1.4E-47 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLI_RS16755 3885a201239692331fc4901c0c7ec2c0 238 SMART SM00363 2 62 6.2E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS16755 3885a201239692331fc4901c0c7ec2c0 238 Pfam PF00849 RNA pseudouridylate synthase 63 196 5.8E-19 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS16755 3885a201239692331fc4901c0c7ec2c0 238 SUPERFAMILY SSF55120 48 237 4.68E-43 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS16755 3885a201239692331fc4901c0c7ec2c0 238 Gene3D G3DSA:3.10.290.10 2 65 9.4E-19 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS16755 3885a201239692331fc4901c0c7ec2c0 238 Pfam PF01479 S4 domain 2 45 4.5E-12 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS16755 3885a201239692331fc4901c0c7ec2c0 238 SUPERFAMILY SSF55174 3 59 4.71E-12 T 23-04-2016 CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 SUPERFAMILY SSF51445 423 453 7.59E-80 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 SUPERFAMILY SSF51445 51 338 7.59E-80 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 ProSitePatterns PS01095 Chitinases family 18 active site. 189 197 - T 23-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 Pfam PF00704 Glycosyl hydrolases family 18 54 451 1.6E-80 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 Gene3D G3DSA:3.10.50.10 340 422 4.1E-17 T 23-04-2016 IPR029070 Chitinase insertion domain CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 PANTHER PTHR11177:SF215 133 523 1.5E-187 T 23-04-2016 CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 PANTHER PTHR11177:SF215 49 107 1.5E-187 T 23-04-2016 CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 SMART SM00636 52 451 5.0E-116 T 23-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 PANTHER PTHR11177 133 523 1.5E-187 T 23-04-2016 CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 PANTHER PTHR11177 49 107 1.5E-187 T 23-04-2016 CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 Gene3D G3DSA:3.20.20.80 428 457 9.8E-89 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 Gene3D G3DSA:3.20.20.80 47 339 9.8E-89 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 SUPERFAMILY SSF54556 338 422 5.04E-19 T 23-04-2016 IPR029070 Chitinase insertion domain CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 Pfam PF06483 Chitinase C 469 601 2.2E-7 T 23-04-2016 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902|UniPathway: UPA00349 CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 SUPERFAMILY SSF49384 504 607 7.67E-12 T 23-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 CLI_RS03925 5d6c5e669df6691db9a097f2c8751e87 617 Gene3D G3DSA:2.60.40.290 518 586 2.4E-7 T 23-04-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 CLI_RS17085 96dd76daf45d4585953cf4ac0a2ea061 392 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 32 294 1.5E-58 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLI_RS17085 96dd76daf45d4585953cf4ac0a2ea061 392 PANTHER PTHR11562 18 314 8.9E-152 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLI_RS17085 96dd76daf45d4585953cf4ac0a2ea061 392 Pfam PF16916 Dimerisation domain of Zinc Transporter 229 304 3.1E-12 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CLI_RS17085 96dd76daf45d4585953cf4ac0a2ea061 392 SUPERFAMILY SSF160240 227 306 1.57E-17 T 23-04-2016 CLI_RS17085 96dd76daf45d4585953cf4ac0a2ea061 392 Gene3D G3DSA:3.30.70.1350 226 306 3.1E-19 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CLI_RS17085 96dd76daf45d4585953cf4ac0a2ea061 392 Pfam PF01545 Cation efflux family 32 224 4.7E-45 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLI_RS17085 96dd76daf45d4585953cf4ac0a2ea061 392 PANTHER PTHR11562:SF57 18 314 8.9E-152 T 23-04-2016 CLI_RS17085 96dd76daf45d4585953cf4ac0a2ea061 392 SUPERFAMILY SSF161111 25 225 1.7E-51 T 23-04-2016 CLI_RS17085 96dd76daf45d4585953cf4ac0a2ea061 392 Gene3D G3DSA:1.20.1510.10 31 224 1.4E-42 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CLI_RS10945 3d3aa920ceb4f8a7b77aea76b5064f23 244 PANTHER PTHR24362 11 167 3.5E-21 T 23-04-2016 CLI_RS10945 3d3aa920ceb4f8a7b77aea76b5064f23 244 Gene3D G3DSA:1.10.510.10 128 179 7.6E-16 T 23-04-2016 CLI_RS10945 3d3aa920ceb4f8a7b77aea76b5064f23 244 SUPERFAMILY SSF56112 17 209 2.87E-33 T 23-04-2016 IPR011009 Protein kinase-like domain CLI_RS10945 3d3aa920ceb4f8a7b77aea76b5064f23 244 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 27 48 - T 23-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 CLI_RS10945 3d3aa920ceb4f8a7b77aea76b5064f23 244 Gene3D G3DSA:3.30.200.20 14 127 6.8E-23 T 23-04-2016 CLI_RS10945 3d3aa920ceb4f8a7b77aea76b5064f23 244 SMART SM00220 21 236 2.6E-9 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLI_RS10945 3d3aa920ceb4f8a7b77aea76b5064f23 244 Pfam PF00069 Protein kinase domain 21 173 5.2E-26 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLI_RS17660 72430746191d520c980cdb1c230468e8 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 5.7E-50 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CLI_RS17660 72430746191d520c980cdb1c230468e8 130 PANTHER PTHR21569 1 130 3.9E-72 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CLI_RS17660 72430746191d520c980cdb1c230468e8 130 SUPERFAMILY SSF54211 6 130 4.55E-50 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS17660 72430746191d520c980cdb1c230468e8 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CLI_RS17660 72430746191d520c980cdb1c230468e8 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.716 T 23-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid CLI_RS17660 72430746191d520c980cdb1c230468e8 130 Gene3D G3DSA:3.30.230.10 5 130 8.0E-53 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS16450 488793fd2a4052a99720138a2171af61 430 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 7.9E-44 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CLI_RS16450 488793fd2a4052a99720138a2171af61 430 Gene3D G3DSA:1.10.3120.10 220 392 4.9E-56 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CLI_RS16450 488793fd2a4052a99720138a2171af61 430 SUPERFAMILY SSF102735 1 132 6.02E-41 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CLI_RS16450 488793fd2a4052a99720138a2171af61 430 Hamap MF_00303 Trigger factor [tig]. 1 429 22.882 T 23-04-2016 IPR005215 Trigger factor GO:0015031 CLI_RS16450 488793fd2a4052a99720138a2171af61 430 TIGRFAM TIGR00115 tig: trigger factor 13 423 3.6E-136 T 23-04-2016 IPR005215 Trigger factor GO:0015031 CLI_RS16450 488793fd2a4052a99720138a2171af61 430 PANTHER PTHR30560 1 427 1.9E-129 T 23-04-2016 CLI_RS16450 488793fd2a4052a99720138a2171af61 430 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 424 1.2E-43 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CLI_RS16450 488793fd2a4052a99720138a2171af61 430 Gene3D G3DSA:3.30.70.1050 1 119 5.6E-38 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CLI_RS16450 488793fd2a4052a99720138a2171af61 430 SUPERFAMILY SSF109998 250 427 1.96E-41 T 23-04-2016 IPR027304 Trigger factor/SurA domain CLI_RS16450 488793fd2a4052a99720138a2171af61 430 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 234 3.8E-11 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CLI_RS16450 488793fd2a4052a99720138a2171af61 430 PANTHER PTHR30560:SF3 1 427 1.9E-129 T 23-04-2016 CLI_RS16450 488793fd2a4052a99720138a2171af61 430 PIRSF PIRSF003095 1 430 2.1E-128 T 23-04-2016 IPR005215 Trigger factor GO:0015031 CLI_RS16450 488793fd2a4052a99720138a2171af61 430 SUPERFAMILY SSF54534 89 243 2.55E-30 T 23-04-2016 CLI_RS16450 488793fd2a4052a99720138a2171af61 430 Gene3D G3DSA:3.10.50.40 158 219 2.5E-6 T 23-04-2016 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 Gene3D G3DSA:2.60.260.20 109 144 1.3E-17 T 23-04-2016 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 Gene3D G3DSA:2.60.260.20 219 261 1.3E-17 T 23-04-2016 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 358 4.2E-143 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 SUPERFAMILY SSF49493 118 159 8.5E-17 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 SUPERFAMILY SSF49493 222 265 8.5E-17 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 PANTHER PTHR24078 1 364 1.1E-154 T 23-04-2016 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 Gene3D G3DSA:2.10.230.10 145 218 7.1E-21 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 Gene3D G3DSA:1.10.287.110 3 108 1.6E-37 T 23-04-2016 IPR001623 DnaJ domain CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-04-2016 IPR018253 DnaJ domain, conserved site CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 PRINTS PR00625 DnaJ domain signature 42 62 2.5E-29 T 23-04-2016 IPR001623 DnaJ domain CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 PRINTS PR00625 DnaJ domain signature 7 25 2.5E-29 T 23-04-2016 IPR001623 DnaJ domain CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 PRINTS PR00625 DnaJ domain signature 62 81 2.5E-29 T 23-04-2016 IPR001623 DnaJ domain CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 PRINTS PR00625 DnaJ domain signature 25 40 2.5E-29 T 23-04-2016 IPR001623 DnaJ domain CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 378 40.854 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 Pfam PF00226 DnaJ domain 5 67 4.1E-29 T 23-04-2016 IPR001623 DnaJ domain CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 SMART SM00271 4 62 3.3E-34 T 23-04-2016 IPR001623 DnaJ domain CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 SUPERFAMILY SSF57938 138 219 3.53E-19 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 SUPERFAMILY SSF46565 1 106 6.15E-37 T 23-04-2016 IPR001623 DnaJ domain CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 Pfam PF00684 DnaJ central domain 151 215 1.8E-14 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 SUPERFAMILY SSF49493 267 352 1.44E-23 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 PANTHER PTHR24078:SF190 1 364 1.1E-154 T 23-04-2016 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 Gene3D G3DSA:2.60.260.20 264 342 8.2E-23 T 23-04-2016 CLI_RS14720 af53b007c0d07aa0f1b6021d0dba4fb0 381 Pfam PF01556 DnaJ C terminal domain 124 341 2.0E-43 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal CLI_RS16280 77ce01a93a1e7c97e212b6bbec07886b 379 SUPERFAMILY SSF47203 227 378 4.83E-58 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLI_RS16280 77ce01a93a1e7c97e212b6bbec07886b 379 SUPERFAMILY SSF56645 2 242 1.1E-86 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CLI_RS16280 77ce01a93a1e7c97e212b6bbec07886b 379 Gene3D G3DSA:1.20.140.10 218 378 7.9E-72 T 23-04-2016 CLI_RS16280 77ce01a93a1e7c97e212b6bbec07886b 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 8.8E-37 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CLI_RS16280 77ce01a93a1e7c97e212b6bbec07886b 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.4E-24 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CLI_RS16280 77ce01a93a1e7c97e212b6bbec07886b 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLI_RS16280 77ce01a93a1e7c97e212b6bbec07886b 379 PANTHER PTHR10909:SF10 1 378 9.3E-183 T 23-04-2016 CLI_RS16280 77ce01a93a1e7c97e212b6bbec07886b 379 PANTHER PTHR10909 1 378 9.3E-183 T 23-04-2016 CLI_RS16280 77ce01a93a1e7c97e212b6bbec07886b 379 Gene3D G3DSA:2.40.110.10 121 217 2.1E-38 T 23-04-2016 CLI_RS16280 77ce01a93a1e7c97e212b6bbec07886b 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLI_RS16280 77ce01a93a1e7c97e212b6bbec07886b 379 Gene3D G3DSA:1.10.540.10 1 120 9.2E-44 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CLI_RS16280 77ce01a93a1e7c97e212b6bbec07886b 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 6.5E-51 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLI_RS05075 9cb30e0231b3064ce03ba70d0e803a3a 340 SMART SM00852 173 305 3.9E-23 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS05075 9cb30e0231b3064ce03ba70d0e803a3a 340 PANTHER PTHR10192:SF13 91 317 1.4E-101 T 23-04-2016 CLI_RS05075 9cb30e0231b3064ce03ba70d0e803a3a 340 Gene3D G3DSA:3.40.980.10 161 303 2.8E-33 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS05075 9cb30e0231b3064ce03ba70d0e803a3a 340 PANTHER PTHR10192 91 317 1.4E-101 T 23-04-2016 CLI_RS05075 9cb30e0231b3064ce03ba70d0e803a3a 340 Pfam PF00994 Probable molybdopterin binding domain 174 302 4.9E-20 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS05075 9cb30e0231b3064ce03ba70d0e803a3a 340 SUPERFAMILY SSF53218 169 337 1.96E-34 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09540 f28f0c70cdcf98d5f47cf3fb397720dd 143 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 2 142 3.7E-44 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CLI_RS09540 f28f0c70cdcf98d5f47cf3fb397720dd 143 Gene3D G3DSA:1.10.940.10 1 142 1.4E-45 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLI_RS09540 f28f0c70cdcf98d5f47cf3fb397720dd 143 SUPERFAMILY SSF48013 2 142 1.2E-37 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLI_RS09540 f28f0c70cdcf98d5f47cf3fb397720dd 143 Pfam PF01029 NusB family 4 142 2.9E-42 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLI_RS09540 f28f0c70cdcf98d5f47cf3fb397720dd 143 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 1 143 21.766 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CLI_RS09540 f28f0c70cdcf98d5f47cf3fb397720dd 143 PANTHER PTHR11078 1 37 7.3E-49 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CLI_RS09540 f28f0c70cdcf98d5f47cf3fb397720dd 143 PANTHER PTHR11078 53 143 7.3E-49 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CLI_RS06665 9e6d8474d9c8fdbcc86bd005a954e2fe 294 Gene3D G3DSA:3.30.465.10 57 171 3.0E-34 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLI_RS06665 9e6d8474d9c8fdbcc86bd005a954e2fe 294 PANTHER PTHR11908:SF68 8 293 1.2E-123 T 23-04-2016 CLI_RS06665 9e6d8474d9c8fdbcc86bd005a954e2fe 294 SMART SM01092 181 283 1.2E-20 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLI_RS06665 9e6d8474d9c8fdbcc86bd005a954e2fe 294 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 7 171 8.1E-46 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CLI_RS06665 9e6d8474d9c8fdbcc86bd005a954e2fe 294 Gene3D G3DSA:3.30.43.10 8 56 1.0E-6 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CLI_RS06665 9e6d8474d9c8fdbcc86bd005a954e2fe 294 SUPERFAMILY SSF55447 180 282 8.9E-20 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLI_RS06665 9e6d8474d9c8fdbcc86bd005a954e2fe 294 PANTHER PTHR11908 8 293 1.2E-123 T 23-04-2016 CLI_RS06665 9e6d8474d9c8fdbcc86bd005a954e2fe 294 SUPERFAMILY SSF56176 7 171 8.88E-46 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLI_RS06665 9e6d8474d9c8fdbcc86bd005a954e2fe 294 Gene3D G3DSA:3.30.390.50 182 288 6.3E-22 T 23-04-2016 CLI_RS06665 9e6d8474d9c8fdbcc86bd005a954e2fe 294 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 183 282 2.7E-16 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLI_RS07285 d9fb583030b049325d76d4d1ae7f9ec6 344 Pfam PF10974 Protein of unknown function (DUF2804) 22 343 2.0E-95 T 23-04-2016 IPR021243 Protein of unknown function DUF2804 CLI_RS07285 d9fb583030b049325d76d4d1ae7f9ec6 344 PANTHER PTHR35868 8 344 1.9E-144 T 23-04-2016 CLI_RS07285 d9fb583030b049325d76d4d1ae7f9ec6 344 PANTHER PTHR35868:SF3 8 344 1.9E-144 T 23-04-2016 CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 PANTHER PTHR21666 679 792 8.5E-40 T 23-04-2016 CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 SMART SM00287 267 330 2.3E-10 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 SMART SM00287 347 409 7.9E-9 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 SMART SM00287 424 488 8.7E-10 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 SMART SM00287 186 248 7.3E-10 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 Pfam PF00877 NlpC/P60 family 701 788 1.5E-27 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 Pfam PF08239 Bacterial SH3 domain 356 406 1.0E-14 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 Pfam PF08239 Bacterial SH3 domain 194 244 9.2E-15 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 Pfam PF08239 Bacterial SH3 domain 434 485 3.0E-15 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 Pfam PF08239 Bacterial SH3 domain 276 327 1.1E-15 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 Pfam PF05257 CHAP domain 53 137 4.7E-13 T 23-04-2016 IPR007921 CHAP domain CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 SUPERFAMILY SSF54001 686 789 2.35E-42 T 23-04-2016 CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 SUPERFAMILY SSF54001 36 163 2.65E-18 T 23-04-2016 CLI_RS02745 be96b178f07fb44aa0afd9f8147c3bc6 798 Gene3D G3DSA:3.90.1720.10 684 789 5.4E-46 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 Pfam PF02954 Bacterial regulatory protein, Fis family 599 640 5.8E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 PANTHER PTHR32071 120 644 3.8E-204 T 23-04-2016 CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 623 643 1.2E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 606 623 1.2E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 SMART SM00382 353 498 3.7E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 Pfam PF00158 Sigma-54 interaction domain 333 500 6.6E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 Gene3D G3DSA:1.10.10.60 581 643 6.8E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 SUPERFAMILY SSF55785 207 296 9.9E-5 T 23-04-2016 IPR000014 PAS domain CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 PANTHER PTHR32071:SF27 120 644 3.8E-204 T 23-04-2016 CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 357 370 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 Gene3D G3DSA:3.40.50.300 329 506 3.4E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 Gene3D G3DSA:1.10.8.60 507 580 2.8E-23 T 23-04-2016 CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 SUPERFAMILY SSF46689 547 642 2.29E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 SUPERFAMILY SSF52540 333 578 2.6E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 Gene3D G3DSA:3.30.450.20 200 306 7.2E-6 T 23-04-2016 CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 SUPERFAMILY SSF55781 60 199 3.47E-6 T 23-04-2016 IPR029016 GAF domain-like CLI_RS08350 ea84663512594173ff2182fb1511dbd7 650 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 547 556 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS10140 8207141d8b1f6476e384cb8ba8bfaef3 354 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 243 1.5E-14 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CLI_RS10140 8207141d8b1f6476e384cb8ba8bfaef3 354 Gene3D G3DSA:3.30.360.10 133 348 6.5E-35 T 23-04-2016 CLI_RS10140 8207141d8b1f6476e384cb8ba8bfaef3 354 Gene3D G3DSA:3.40.50.720 1 132 3.1E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS10140 8207141d8b1f6476e384cb8ba8bfaef3 354 PANTHER PTHR22604:SF53 1 352 8.9E-126 T 23-04-2016 CLI_RS10140 8207141d8b1f6476e384cb8ba8bfaef3 354 SUPERFAMILY SSF51735 3 204 3.83E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS10140 8207141d8b1f6476e384cb8ba8bfaef3 354 PANTHER PTHR22604 1 352 8.9E-126 T 23-04-2016 CLI_RS10140 8207141d8b1f6476e384cb8ba8bfaef3 354 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 125 5.3E-25 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 CLI_RS04775 abfb5619997b1b22a71375075e1f74d5 786 PANTHER PTHR24220:SF539 3 389 2.4E-145 T 23-04-2016 CLI_RS04775 abfb5619997b1b22a71375075e1f74d5 786 PANTHER PTHR24220 3 389 2.4E-145 T 23-04-2016 CLI_RS04775 abfb5619997b1b22a71375075e1f74d5 786 SUPERFAMILY SSF52540 1 225 1.05E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04775 abfb5619997b1b22a71375075e1f74d5 786 SMART SM00382 30 217 6.0E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS04775 abfb5619997b1b22a71375075e1f74d5 786 Pfam PF00005 ABC transporter 21 169 1.3E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS04775 abfb5619997b1b22a71375075e1f74d5 786 Gene3D G3DSA:3.40.50.300 1 224 2.5E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04775 abfb5619997b1b22a71375075e1f74d5 786 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS04775 abfb5619997b1b22a71375075e1f74d5 786 Pfam PF02687 FtsX-like permease family 661 779 2.1E-21 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 SUPERFAMILY SSF52540 348 395 3.15E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 SUPERFAMILY SSF52540 2 226 3.15E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 PANTHER PTHR30612 3 835 0.0 T 23-04-2016 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 SMART SM00957 4 382 3.1E-276 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 Gene3D G3DSA:1.10.3060.10 599 780 5.0E-53 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 SMART SM00958 226 338 1.5E-65 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 Pfam PF01043 SecA preprotein cross-linking domain 230 338 9.9E-41 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 781 19.895 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 SUPERFAMILY SSF81886 571 823 4.84E-78 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 SUPERFAMILY SSF81767 225 348 1.57E-45 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 Pfam PF07517 SecA DEAD-like domain 5 382 3.1E-130 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 Gene3D G3DSA:3.40.50.300 349 395 8.6E-124 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 Gene3D G3DSA:3.40.50.300 3 226 8.6E-124 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 SUPERFAMILY SSF52540 397 569 1.08E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 PRINTS PR00906 SecA protein signature 115 125 1.8E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 PRINTS PR00906 SecA protein signature 319 341 1.8E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 PRINTS PR00906 SecA protein signature 393 406 1.8E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 PRINTS PR00906 SecA protein signature 168 188 1.8E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 PRINTS PR00906 SecA protein signature 99 113 1.8E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 PRINTS PR00906 SecA protein signature 356 373 1.8E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 PRINTS PR00906 SecA protein signature 61 85 1.8E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 Pfam PF02810 SEC-C motif 815 833 4.2E-9 T 23-04-2016 IPR004027 SEC-C motif CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 496 3.0E-232 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 Gene3D G3DSA:3.40.50.300 397 570 6.6E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 ProSitePatterns PS01312 SecA family signature. 480 495 - T 23-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 Pfam PF07516 SecA Wing and Scaffold domain 568 778 1.0E-66 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CLI_RS01020 c50bd2e0ad751aab0443d3fa6f4be338 835 Gene3D G3DSA:3.90.1440.10 228 348 7.3E-46 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CLI_RS13965 0908e1881813aca08936f898c67ba2db 341 PANTHER PTHR21666 23 313 3.6E-53 T 23-04-2016 CLI_RS13965 0908e1881813aca08936f898c67ba2db 341 PANTHER PTHR21666:SF181 23 313 3.6E-53 T 23-04-2016 CLI_RS13965 0908e1881813aca08936f898c67ba2db 341 Pfam PF06725 3D domain 280 340 3.6E-23 T 23-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CLI_RS13965 0908e1881813aca08936f898c67ba2db 341 SUPERFAMILY SSF50685 279 330 1.85E-10 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CLI_RS08385 da5ce73806594d49f5ab692bfbc6f7fa 331 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 5 319 4.0E-111 T 23-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 CLI_RS08385 da5ce73806594d49f5ab692bfbc6f7fa 331 SUPERFAMILY SSF82649 244 329 1.05E-22 T 23-04-2016 CLI_RS08385 da5ce73806594d49f5ab692bfbc6f7fa 331 Gene3D G3DSA:3.30.390.50 244 329 1.0E-28 T 23-04-2016 CLI_RS08385 da5ce73806594d49f5ab692bfbc6f7fa 331 PANTHER PTHR12561:SF3 1 324 1.2E-125 T 23-04-2016 CLI_RS08385 da5ce73806594d49f5ab692bfbc6f7fa 331 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 244 327 2.3E-24 T 23-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 CLI_RS08385 da5ce73806594d49f5ab692bfbc6f7fa 331 Pfam PF03099 Biotin/lipoate A/B protein ligase family 46 150 1.1E-10 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CLI_RS08385 da5ce73806594d49f5ab692bfbc6f7fa 331 SUPERFAMILY SSF55681 1 242 9.23E-81 T 23-04-2016 CLI_RS08385 da5ce73806594d49f5ab692bfbc6f7fa 331 Gene3D G3DSA:3.90.1550.10 1 242 1.3E-87 T 23-04-2016 CLI_RS08385 da5ce73806594d49f5ab692bfbc6f7fa 331 PANTHER PTHR12561 1 324 1.2E-125 T 23-04-2016 CLI_RS00605 8515c89c32debf801bfc837f1633f6eb 174 Pfam PF04055 Radical SAM superfamily 25 108 7.7E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS00605 8515c89c32debf801bfc837f1633f6eb 174 PANTHER PTHR30352:SF2 17 172 6.0E-47 T 23-04-2016 CLI_RS00605 8515c89c32debf801bfc837f1633f6eb 174 PANTHER PTHR30352 17 172 6.0E-47 T 23-04-2016 CLI_RS00605 8515c89c32debf801bfc837f1633f6eb 174 PIRSF PIRSF000368 1 172 3.9E-54 T 23-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- CLI_RS00605 8515c89c32debf801bfc837f1633f6eb 174 Pfam PF13353 4Fe-4S single cluster domain 17 155 2.6E-40 T 23-04-2016 CLI_RS00605 8515c89c32debf801bfc837f1633f6eb 174 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 23-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLI_RS00605 8515c89c32debf801bfc837f1633f6eb 174 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 12 157 1.6E-46 T 23-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- CLI_RS00605 8515c89c32debf801bfc837f1633f6eb 174 Gene3D G3DSA:3.80.30.10 68 166 7.6E-16 T 23-04-2016 CLI_RS00605 8515c89c32debf801bfc837f1633f6eb 174 SUPERFAMILY SSF102114 27 137 6.67E-12 T 23-04-2016 CLI_RS11980 500c9703399e446329c1fdad4dc28f5f 86 PANTHER PTHR35331 1 86 1.1E-59 T 23-04-2016 CLI_RS11980 500c9703399e446329c1fdad4dc28f5f 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 4.0E-27 T 23-04-2016 IPR007347 Sporulation stage V, protein S CLI_RS11980 500c9703399e446329c1fdad4dc28f5f 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 83 1.8E-40 T 23-04-2016 IPR007347 Sporulation stage V, protein S CLI_RS01175 44c8d222ce17f6afd5a1f190f109198f 648 Pfam PF08497 Radical SAM N-terminal 9 305 2.3E-136 T 23-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal CLI_RS01175 44c8d222ce17f6afd5a1f190f109198f 648 PANTHER PTHR32331:SF0 1 647 0.0 T 23-04-2016 CLI_RS01175 44c8d222ce17f6afd5a1f190f109198f 648 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 9 567 9.2E-273 T 23-04-2016 IPR022946 Uncharacterised protein family UPF0313 CLI_RS01175 44c8d222ce17f6afd5a1f190f109198f 648 PANTHER PTHR32331 1 647 0.0 T 23-04-2016 CLI_RS01175 44c8d222ce17f6afd5a1f190f109198f 648 Gene3D G3DSA:3.80.30.20 302 564 2.3E-37 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS01175 44c8d222ce17f6afd5a1f190f109198f 648 Pfam PF11842 Domain of unknown function (DUF3362) 521 644 3.6E-35 T 23-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal CLI_RS01175 44c8d222ce17f6afd5a1f190f109198f 648 SMART SM00729 302 553 3.1E-12 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS01175 44c8d222ce17f6afd5a1f190f109198f 648 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 8 638 45.205 T 23-04-2016 IPR022946 Uncharacterised protein family UPF0313 CLI_RS01175 44c8d222ce17f6afd5a1f190f109198f 648 Pfam PF04055 Radical SAM superfamily 307 505 5.0E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS01175 44c8d222ce17f6afd5a1f190f109198f 648 SUPERFAMILY SSF102114 300 365 1.43E-13 T 23-04-2016 CLI_RS01175 44c8d222ce17f6afd5a1f190f109198f 648 SUPERFAMILY SSF102114 395 551 1.43E-13 T 23-04-2016 CLI_RS09835 1af51ffcc499b7dbed1a9ce747299461 162 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 142 7.1E-38 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09835 1af51ffcc499b7dbed1a9ce747299461 162 SUPERFAMILY SSF53218 2 152 3.4E-46 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09835 1af51ffcc499b7dbed1a9ce747299461 162 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 65 78 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 CLI_RS09835 1af51ffcc499b7dbed1a9ce747299461 162 PIRSF PIRSF006443 1 156 1.1E-41 T 23-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 CLI_RS09835 1af51ffcc499b7dbed1a9ce747299461 162 Gene3D G3DSA:3.40.980.10 2 159 2.2E-57 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09835 1af51ffcc499b7dbed1a9ce747299461 162 SMART SM00852 5 149 1.4E-30 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09835 1af51ffcc499b7dbed1a9ce747299461 162 Pfam PF00994 Probable molybdopterin binding domain 5 148 1.0E-36 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09835 1af51ffcc499b7dbed1a9ce747299461 162 PANTHER PTHR10192 2 160 4.2E-78 T 23-04-2016 CLI_RS05980 a125558396682397d313baed7450114c 579 Gene3D G3DSA:3.40.50.300 344 417 7.0E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05980 a125558396682397d313baed7450114c 579 SUPERFAMILY SSF53795 345 576 1.69E-16 T 23-04-2016 CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 Pfam PF02954 Bacterial regulatory protein, Fis family 417 457 1.4E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 SUPERFAMILY SSF55785 28 129 1.52E-5 T 23-04-2016 IPR000014 PAS domain CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 PANTHER PTHR32071 33 470 1.7E-248 T 23-04-2016 CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 Pfam PF00158 Sigma-54 interaction domain 152 319 6.2E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 PANTHER PTHR32071:SF27 33 470 1.7E-248 T 23-04-2016 CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 SUPERFAMILY SSF46689 366 460 7.62E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 Gene3D G3DSA:3.40.50.300 148 325 1.5E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 239 254 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 Gene3D G3DSA:1.10.10.60 416 460 3.3E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 SMART SM00382 172 324 9.6E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 Gene3D G3DSA:3.30.450.20 27 129 3.7E-4 T 23-04-2016 CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 366 375 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 423 440 7.9E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 460 7.9E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 Gene3D G3DSA:1.10.8.60 326 403 1.2E-19 T 23-04-2016 CLI_RS03205 0a4e3515edf0c1922d8c5702530a9263 470 SUPERFAMILY SSF52540 151 394 1.42E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16790 d3cfca3d1d2dfd143d16b6b9a546aec7 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 4.6E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS16790 d3cfca3d1d2dfd143d16b6b9a546aec7 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 4.6E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS16790 d3cfca3d1d2dfd143d16b6b9a546aec7 214 PANTHER PTHR30055:SF70 9 207 8.6E-53 T 23-04-2016 CLI_RS16790 d3cfca3d1d2dfd143d16b6b9a546aec7 214 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 69 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLI_RS16790 d3cfca3d1d2dfd143d16b6b9a546aec7 214 Gene3D G3DSA:1.10.357.10 23 206 6.7E-26 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS16790 d3cfca3d1d2dfd143d16b6b9a546aec7 214 SUPERFAMILY SSF46689 19 73 2.74E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS16790 d3cfca3d1d2dfd143d16b6b9a546aec7 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 71 3.4E-15 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS16790 d3cfca3d1d2dfd143d16b6b9a546aec7 214 PANTHER PTHR30055 9 207 8.6E-53 T 23-04-2016 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 Gene3D G3DSA:3.30.420.40 184 325 1.8E-42 T 23-04-2016 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 SUPERFAMILY SSF53067 7 174 1.89E-67 T 23-04-2016 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 PANTHER PTHR21060:SF16 3 360 5.9E-260 T 23-04-2016 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 Gene3D G3DSA:3.30.420.40 7 183 2.7E-75 T 23-04-2016 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 PRINTS PR00471 Acetate kinase family signature 7 18 4.3E-19 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 PRINTS PR00471 Acetate kinase family signature 298 314 4.3E-19 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 PRINTS PR00471 Acetate kinase family signature 181 202 4.3E-19 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 PRINTS PR00471 Acetate kinase family signature 275 288 4.3E-19 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 PIRSF PIRSF036458 4 357 5.7E-154 T 23-04-2016 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 7 354 2.0E-153 T 23-04-2016 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 Hamap MF_00542 Probable butyrate kinase [buk]. 1 364 156.335 T 23-04-2016 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 SUPERFAMILY SSF53067 121 347 6.98E-48 T 23-04-2016 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 Pfam PF00871 Acetokinase family 6 354 2.2E-64 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17575 d7c97ca31b45e3d53f6ae7eafab06410 364 PANTHER PTHR21060 3 360 5.9E-260 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 296 5.1E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 SUPERFAMILY SSF51905 1 324 1.15E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 PANTHER PTHR22912:SF141 1 380 1.8E-154 T 23-04-2016 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 4.4E-25 T 23-04-2016 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.4E-25 T 23-04-2016 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 4.4E-25 T 23-04-2016 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 263 4.4E-25 T 23-04-2016 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 296 4.4E-25 T 23-04-2016 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 PANTHER PTHR22912 1 380 1.8E-154 T 23-04-2016 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 Gene3D G3DSA:3.50.50.60 115 316 3.2E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 Gene3D G3DSA:3.50.50.60 1 114 6.5E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 248 262 7.0E-18 T 23-04-2016 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 289 296 7.0E-18 T 23-04-2016 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.0E-18 T 23-04-2016 CLI_RS05615 3ca163ddad8f364b6ee315fd05b0a75a 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 181 7.0E-18 T 23-04-2016 CLI_RS16295 1f91907529150521449b517a9024fff2 260 PANTHER PTHR11941:SF54 2 256 5.2E-115 T 23-04-2016 CLI_RS16295 1f91907529150521449b517a9024fff2 260 PANTHER PTHR11941 2 256 5.2E-115 T 23-04-2016 CLI_RS16295 1f91907529150521449b517a9024fff2 260 SUPERFAMILY SSF52096 4 259 3.53E-92 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS16295 1f91907529150521449b517a9024fff2 260 Gene3D G3DSA:3.90.226.10 3 198 5.6E-78 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS16295 1f91907529150521449b517a9024fff2 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 257 1.6E-75 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CLI_RS16295 1f91907529150521449b517a9024fff2 260 Gene3D G3DSA:1.10.12.10 201 258 2.5E-23 T 23-04-2016 IPR014748 Crontonase, C-terminal CLI_RS16295 1f91907529150521449b517a9024fff2 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CLI_RS01460 4854d8f35a0270c7bae0fc0784fa3932 487 PIRSF PIRSF006060 1 481 3.2E-85 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS01460 4854d8f35a0270c7bae0fc0784fa3932 487 PANTHER PTHR11785 4 485 8.4E-213 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS01460 4854d8f35a0270c7bae0fc0784fa3932 487 PANTHER PTHR11785:SF204 4 485 8.4E-213 T 23-04-2016 CLI_RS01460 4854d8f35a0270c7bae0fc0784fa3932 487 Pfam PF00324 Amino acid permease 22 467 2.9E-133 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CLI_RS05445 b2f36b9b899b48365d7bf5421e1c96a7 228 SMART SM00862 148 224 4.0E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS05445 b2f36b9b899b48365d7bf5421e1c96a7 228 Gene3D G3DSA:1.10.10.10 129 225 8.4E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05445 b2f36b9b899b48365d7bf5421e1c96a7 228 SUPERFAMILY SSF46894 128 224 5.95E-30 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS05445 b2f36b9b899b48365d7bf5421e1c96a7 228 Gene3D G3DSA:3.40.50.2300 2 122 3.3E-35 T 23-04-2016 CLI_RS05445 b2f36b9b899b48365d7bf5421e1c96a7 228 SUPERFAMILY SSF52172 3 118 1.42E-36 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS05445 b2f36b9b899b48365d7bf5421e1c96a7 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 4.5E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS05445 b2f36b9b899b48365d7bf5421e1c96a7 228 SMART SM00448 2 112 3.8E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS05445 b2f36b9b899b48365d7bf5421e1c96a7 228 PANTHER PTHR26402 2 224 2.2E-116 T 23-04-2016 CLI_RS05445 b2f36b9b899b48365d7bf5421e1c96a7 228 Pfam PF00072 Response regulator receiver domain 4 113 6.8E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS05445 b2f36b9b899b48365d7bf5421e1c96a7 228 PANTHER PTHR26402:SF614 2 224 2.2E-116 T 23-04-2016 CLI_RS08795 e4c9a66da71bf3d785d1090993a3501a 396 PANTHER PTHR11751:SF404 10 395 3.5E-150 T 23-04-2016 CLI_RS08795 e4c9a66da71bf3d785d1090993a3501a 396 Gene3D G3DSA:3.40.640.10 56 270 8.1E-66 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS08795 e4c9a66da71bf3d785d1090993a3501a 396 SUPERFAMILY SSF53383 1 392 4.21E-96 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS08795 e4c9a66da71bf3d785d1090993a3501a 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 232 245 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 CLI_RS08795 e4c9a66da71bf3d785d1090993a3501a 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 112 133 1.0E-11 T 23-04-2016 CLI_RS08795 e4c9a66da71bf3d785d1090993a3501a 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 160 184 1.0E-11 T 23-04-2016 CLI_RS08795 e4c9a66da71bf3d785d1090993a3501a 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 226 250 1.0E-11 T 23-04-2016 CLI_RS08795 e4c9a66da71bf3d785d1090993a3501a 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 90 110 1.0E-11 T 23-04-2016 CLI_RS08795 e4c9a66da71bf3d785d1090993a3501a 396 PANTHER PTHR11751 10 395 3.5E-150 T 23-04-2016 CLI_RS08795 e4c9a66da71bf3d785d1090993a3501a 396 Gene3D G3DSA:3.90.1150.10 271 394 1.3E-30 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS08795 e4c9a66da71bf3d785d1090993a3501a 396 Pfam PF00155 Aminotransferase class I and II 31 385 1.3E-53 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS02400 847c4fb3cdb9396eb33d1888b03c6da4 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 7.98E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS02400 847c4fb3cdb9396eb33d1888b03c6da4 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 7.98E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS02400 847c4fb3cdb9396eb33d1888b03c6da4 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 55 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLI_RS02400 847c4fb3cdb9396eb33d1888b03c6da4 202 Gene3D G3DSA:1.10.357.10 7 191 1.7E-31 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS02400 847c4fb3cdb9396eb33d1888b03c6da4 202 SUPERFAMILY SSF46689 7 64 6.48E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS02400 847c4fb3cdb9396eb33d1888b03c6da4 202 PANTHER PTHR30055 5 195 1.1E-36 T 23-04-2016 CLI_RS02400 847c4fb3cdb9396eb33d1888b03c6da4 202 PANTHER PTHR30055:SF27 5 195 1.1E-36 T 23-04-2016 CLI_RS02400 847c4fb3cdb9396eb33d1888b03c6da4 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 6.1E-17 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS09955 155c39a3b3adac7902360d896a88c60b 739 PANTHER PTHR41775 13 739 3.4E-207 T 23-04-2016 CLI_RS09955 155c39a3b3adac7902360d896a88c60b 739 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 150 429 8.5E-50 T 23-04-2016 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 CLI_RS09955 155c39a3b3adac7902360d896a88c60b 739 Gene3D G3DSA:3.40.390.10 277 352 4.9E-6 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CLI_RS03455 c1b71c64ea9468f589b3351aeeadf33e 241 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS03455 c1b71c64ea9468f589b3351aeeadf33e 241 SUPERFAMILY SSF52540 5 224 1.2E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03455 c1b71c64ea9468f589b3351aeeadf33e 241 SMART SM00382 29 216 1.0E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03455 c1b71c64ea9468f589b3351aeeadf33e 241 PANTHER PTHR24220:SF0 6 235 2.1E-99 T 23-04-2016 CLI_RS03455 c1b71c64ea9468f589b3351aeeadf33e 241 Pfam PF00005 ABC transporter 20 161 1.7E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03455 c1b71c64ea9468f589b3351aeeadf33e 241 PANTHER PTHR24220 6 235 2.1E-99 T 23-04-2016 CLI_RS03455 c1b71c64ea9468f589b3351aeeadf33e 241 Gene3D G3DSA:3.40.50.300 2 224 1.4E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00375 f56593f169be1c4e57dff22939029b18 302 PANTHER PTHR30237 1 299 1.6E-137 T 23-04-2016 CLI_RS00375 f56593f169be1c4e57dff22939029b18 302 SUPERFAMILY SSF141986 137 296 7.59E-44 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain CLI_RS00375 f56593f169be1c4e57dff22939029b18 302 Gene3D G3DSA:3.50.30.60 170 298 5.8E-45 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain CLI_RS00375 f56593f169be1c4e57dff22939029b18 302 SUPERFAMILY SSF52317 2 160 2.65E-52 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS00375 f56593f169be1c4e57dff22939029b18 302 Pfam PF02016 LD-carboxypeptidase 12 290 2.5E-83 T 23-04-2016 IPR003507 Peptidase family S66 CLI_RS00375 f56593f169be1c4e57dff22939029b18 302 PANTHER PTHR30237:SF2 1 299 1.6E-137 T 23-04-2016 CLI_RS00375 f56593f169be1c4e57dff22939029b18 302 Gene3D G3DSA:3.40.50.10740 3 159 5.3E-53 T 23-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain CLI_RS00375 f56593f169be1c4e57dff22939029b18 302 PIRSF PIRSF028757 1 302 4.5E-95 T 23-04-2016 IPR003507 Peptidase family S66 CLI_RS14325 e14b90b740fe2c6fba497701d59ef75a 331 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 2 331 45.136 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CLI_RS14325 e14b90b740fe2c6fba497701d59ef75a 331 PANTHER PTHR10520 1 321 1.4E-189 T 23-04-2016 CLI_RS14325 e14b90b740fe2c6fba497701d59ef75a 331 Gene3D G3DSA:3.30.1330.10 17 164 1.2E-59 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CLI_RS14325 e14b90b740fe2c6fba497701d59ef75a 331 SUPERFAMILY SSF56042 165 328 6.88E-51 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS14325 e14b90b740fe2c6fba497701d59ef75a 331 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 2 323 1.8E-131 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CLI_RS14325 e14b90b740fe2c6fba497701d59ef75a 331 Pfam PF02769 AIR synthase related protein, C-terminal domain 171 327 2.6E-31 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS14325 e14b90b740fe2c6fba497701d59ef75a 331 Gene3D G3DSA:3.90.650.10 165 329 7.6E-60 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS14325 e14b90b740fe2c6fba497701d59ef75a 331 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 157 5.5E-15 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CLI_RS14325 e14b90b740fe2c6fba497701d59ef75a 331 SUPERFAMILY SSF55326 2 164 1.64E-50 T 23-04-2016 CLI_RS05190 88c129d99670aa23a91f80e7f0e4bf09 719 PANTHER PTHR30294:SF4 514 715 2.8E-79 T 23-04-2016 CLI_RS05190 88c129d99670aa23a91f80e7f0e4bf09 719 PANTHER PTHR30294:SF4 1 230 2.8E-79 T 23-04-2016 CLI_RS05190 88c129d99670aa23a91f80e7f0e4bf09 719 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 499 700 2.7E-46 T 23-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal CLI_RS05190 88c129d99670aa23a91f80e7f0e4bf09 719 Pfam PF12698 ABC-2 family transporter protein 340 698 1.9E-8 T 23-04-2016 CLI_RS05190 88c129d99670aa23a91f80e7f0e4bf09 719 Pfam PF12698 ABC-2 family transporter protein 44 164 9.6E-9 T 23-04-2016 CLI_RS05190 88c129d99670aa23a91f80e7f0e4bf09 719 PANTHER PTHR30294 514 715 2.8E-79 T 23-04-2016 CLI_RS05190 88c129d99670aa23a91f80e7f0e4bf09 719 PANTHER PTHR30294 1 230 2.8E-79 T 23-04-2016 CLI_RS05190 88c129d99670aa23a91f80e7f0e4bf09 719 SUPERFAMILY SSF58104 190 430 4.45E-5 T 23-04-2016 CLI_RS05190 88c129d99670aa23a91f80e7f0e4bf09 719 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 170 8.3E-46 T 23-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 SUPERFAMILY SSF47781 551 629 1.11E-15 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 Pfam PF12836 Helix-hairpin-helix motif 482 546 4.3E-30 T 23-04-2016 CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 SUPERFAMILY SSF53098 309 460 1.37E-49 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 SMART SM00316 646 717 1.2E-27 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 Gene3D G3DSA:1.10.150.310 490 627 7.0E-46 T 23-04-2016 IPR023097 Tex RuvX-like domain CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 Pfam PF09371 Tex-like protein N-terminal domain 8 192 1.4E-69 T 23-04-2016 IPR018974 Tex-like protein, N-terminal CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 Gene3D G3DSA:1.10.3500.10 109 309 4.1E-95 T 23-04-2016 IPR023323 Tex-like domain CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 Gene3D G3DSA:1.10.3500.10 442 489 4.1E-95 T 23-04-2016 IPR023323 Tex-like domain CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 Gene3D G3DSA:1.10.10.650 1 108 8.8E-42 T 23-04-2016 IPR023319 Tex-like protein, HTH domain CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 PANTHER PTHR10724 1 718 0.0 T 23-04-2016 CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 SUPERFAMILY SSF50249 632 718 1.03E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 SMART SM00732 313 415 1.6E-36 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 SUPERFAMILY SSF47781 461 547 1.09E-27 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 SUPERFAMILY SSF158832 1 308 1.44E-112 T 23-04-2016 CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 PANTHER PTHR10724:SF1 1 718 0.0 T 23-04-2016 CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 Gene3D G3DSA:2.40.50.140 641 718 1.1E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 Gene3D G3DSA:3.30.420.140 313 441 3.7E-50 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 Pfam PF16921 Tex protein YqgF-like domain 313 442 1.8E-52 T 23-04-2016 IPR032639 Tex protein, YqgF-like domain CLI_RS01040 f17327a5b8e2c1eb0f7db36af0002437 718 Pfam PF00575 S1 RNA binding domain 646 717 1.1E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 CLI_RS04850 6fc0266dac3d7db3774fdccdf1c7784c 99 PANTHER PTHR38662 1 99 1.3E-42 T 23-04-2016 CLI_RS04850 6fc0266dac3d7db3774fdccdf1c7784c 99 TIGRFAM TIGR01165 cbiN: cobalt transport protein 2 87 1.3E-32 T 23-04-2016 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 UniPathway: UPA00148 CLI_RS04850 6fc0266dac3d7db3774fdccdf1c7784c 99 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 99 41.916 T 23-04-2016 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 UniPathway: UPA00148 CLI_RS04850 6fc0266dac3d7db3774fdccdf1c7784c 99 Pfam PF02553 Cobalt transport protein component CbiN 5 73 5.1E-30 T 23-04-2016 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 UniPathway: UPA00148 CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 SUPERFAMILY SSF55920 45 289 3.27E-75 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 Gene3D G3DSA:3.10.450.50 3 24 1.7E-8 T 23-04-2016 IPR032710 NTF2-like domain CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 Hamap MF_01974 Methionine aminopeptidase [map]. 45 291 34.741 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 SUPERFAMILY SSF103642 6 25 2.78E-7 T 23-04-2016 CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 PANTHER PTHR10804 45 289 7.2E-112 T 23-04-2016 CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 PANTHER PTHR10804:SF82 45 289 7.2E-112 T 23-04-2016 CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 202 214 1.4E-20 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 233 245 1.4E-20 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 109 122 1.4E-20 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 132 148 1.4E-20 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 Gene3D G3DSA:3.90.230.10 46 289 4.4E-83 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 Pfam PF00557 Metallopeptidase family M24 55 282 2.8E-49 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 46 290 1.5E-80 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CLI_RS18415 95a5ac7e32d6b0ebbaf664f669cb5df5 291 Pfam PF02810 SEC-C motif 7 23 1.1E-9 T 23-04-2016 IPR004027 SEC-C motif CLI_RS15315 083d042bea3243743fe813c7b9259b56 216 Gene3D G3DSA:3.30.230.30 3 130 2.5E-44 T 23-04-2016 IPR001498 Impact, N-terminal CLI_RS15315 083d042bea3243743fe813c7b9259b56 216 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 77 106 - T 23-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CLI_RS15315 083d042bea3243743fe813c7b9259b56 216 PANTHER PTHR16301 2 210 3.6E-63 T 23-04-2016 IPR023582 Impact family CLI_RS15315 083d042bea3243743fe813c7b9259b56 216 Pfam PF01205 Uncharacterized protein family UPF0029 17 120 1.2E-28 T 23-04-2016 IPR001498 Impact, N-terminal CLI_RS15315 083d042bea3243743fe813c7b9259b56 216 SUPERFAMILY SSF54211 2 130 4.55E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS15315 083d042bea3243743fe813c7b9259b56 216 SUPERFAMILY SSF54980 136 201 2.88E-8 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS15315 083d042bea3243743fe813c7b9259b56 216 Pfam PF09186 Domain of unknown function (DUF1949) 139 193 1.8E-12 T 23-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CLI_RS15315 083d042bea3243743fe813c7b9259b56 216 Gene3D G3DSA:3.30.70.240 135 204 8.0E-10 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS15315 083d042bea3243743fe813c7b9259b56 216 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 198 5.3E-57 T 23-04-2016 IPR015796 Impact family, bacterial/archaeal CLI_RS08210 c84171f42bef26223747fbe6cb4c4e30 329 SMART SM00342 240 323 7.0E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS08210 c84171f42bef26223747fbe6cb4c4e30 329 PANTHER PTHR11019:SF141 56 182 1.0E-61 T 23-04-2016 CLI_RS08210 c84171f42bef26223747fbe6cb4c4e30 329 SUPERFAMILY SSF46689 277 324 1.03E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08210 c84171f42bef26223747fbe6cb4c4e30 329 PANTHER PTHR11019 213 327 1.0E-61 T 23-04-2016 CLI_RS08210 c84171f42bef26223747fbe6cb4c4e30 329 Gene3D G3DSA:1.10.10.60 278 327 2.6E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08210 c84171f42bef26223747fbe6cb4c4e30 329 PANTHER PTHR11019 56 182 1.0E-61 T 23-04-2016 CLI_RS08210 c84171f42bef26223747fbe6cb4c4e30 329 SUPERFAMILY SSF46689 225 274 1.25E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08210 c84171f42bef26223747fbe6cb4c4e30 329 Pfam PF12833 Helix-turn-helix domain 246 324 8.7E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS08210 c84171f42bef26223747fbe6cb4c4e30 329 PANTHER PTHR11019:SF141 213 327 1.0E-61 T 23-04-2016 CLI_RS08210 c84171f42bef26223747fbe6cb4c4e30 329 Gene3D G3DSA:1.10.10.60 220 277 5.1E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 Gene3D G3DSA:3.40.190.10 488 619 3.2E-11 T 23-04-2016 CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 Gene3D G3DSA:2.170.190.11 53 124 6.8E-13 T 23-04-2016 CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 SUPERFAMILY SSF53850 433 623 3.26E-12 T 23-04-2016 CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 Gene3D G3DSA:2.40.340.10 325 395 6.0E-24 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 SUPERFAMILY SSF53218 172 314 3.01E-38 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 Gene3D G3DSA:3.40.980.10 159 324 1.1E-51 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 Pfam PF00994 Probable molybdopterin binding domain 174 310 1.4E-24 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 247 280 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 171 307 4.6E-30 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 Pfam PF03454 MoeA C-terminal region (domain IV) 324 394 5.3E-16 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 SUPERFAMILY SSF63882 11 169 2.88E-35 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 SUPERFAMILY SSF63867 321 395 1.31E-15 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 PANTHER PTHR10192:SF16 1 409 1.6E-238 T 23-04-2016 CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 Gene3D G3DSA:3.90.105.10 125 158 1.1E-12 T 23-04-2016 CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 SMART SM00852 174 311 3.5E-36 T 23-04-2016 IPR001453 MoaB/Mog domain CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 PANTHER PTHR10192 1 409 1.6E-238 T 23-04-2016 CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 Pfam PF12727 PBP superfamily domain 424 608 1.0E-63 T 23-04-2016 IPR024370 PBP domain CLI_RS09825 1ee656f542c65558b59e408c156d0b87 634 Pfam PF03453 MoeA N-terminal region (domain I and II) 12 159 1.8E-21 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS07070 f895d4335385bc88936fa2f9477a08b4 529 PIRSF PIRSF002741 1 527 9.0E-167 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLI_RS07070 f895d4335385bc88936fa2f9477a08b4 529 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 109 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site CLI_RS07070 f895d4335385bc88936fa2f9477a08b4 529 PANTHER PTHR30290:SF27 1 528 1.7E-273 T 23-04-2016 CLI_RS07070 f895d4335385bc88936fa2f9477a08b4 529 Gene3D G3DSA:3.10.105.10 292 488 1.7E-60 T 23-04-2016 CLI_RS07070 f895d4335385bc88936fa2f9477a08b4 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 440 1.0E-92 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain CLI_RS07070 f895d4335385bc88936fa2f9477a08b4 529 Gene3D G3DSA:3.40.190.10 142 291 9.1E-45 T 23-04-2016 CLI_RS07070 f895d4335385bc88936fa2f9477a08b4 529 SUPERFAMILY SSF53850 40 521 6.7E-134 T 23-04-2016 CLI_RS07070 f895d4335385bc88936fa2f9477a08b4 529 PANTHER PTHR30290 1 528 1.7E-273 T 23-04-2016 CLI_RS12655 f594013c54ec781d7a5eed74b7cfbe12 232 SUPERFAMILY SSF52172 2 126 1.12E-46 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS12655 f594013c54ec781d7a5eed74b7cfbe12 232 Gene3D G3DSA:3.40.50.2300 3 127 2.5E-45 T 23-04-2016 CLI_RS12655 f594013c54ec781d7a5eed74b7cfbe12 232 Pfam PF00072 Response regulator receiver domain 6 117 4.3E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS12655 f594013c54ec781d7a5eed74b7cfbe12 232 SMART SM00862 152 228 5.0E-31 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS12655 f594013c54ec781d7a5eed74b7cfbe12 232 SUPERFAMILY SSF46894 128 229 6.24E-33 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS12655 f594013c54ec781d7a5eed74b7cfbe12 232 PANTHER PTHR26402:SF614 4 229 4.6E-112 T 23-04-2016 CLI_RS12655 f594013c54ec781d7a5eed74b7cfbe12 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 6.1E-30 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS12655 f594013c54ec781d7a5eed74b7cfbe12 232 PANTHER PTHR26402 4 229 4.6E-112 T 23-04-2016 CLI_RS12655 f594013c54ec781d7a5eed74b7cfbe12 232 SMART SM00448 4 117 1.6E-49 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS12655 f594013c54ec781d7a5eed74b7cfbe12 232 Gene3D G3DSA:1.10.10.10 132 230 2.5E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 Pfam PF07687 Peptidase dimerisation domain 202 286 5.1E-7 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PIRSF PIRSF016599 1 478 3.0E-190 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 Pfam PF01546 Peptidase family M20/M25/M40 71 476 5.4E-20 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 5 478 4.2E-185 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PRINTS PR00934 X-His dipeptidase (M25) signature 133 150 3.0E-50 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PRINTS PR00934 X-His dipeptidase (M25) signature 359 377 3.0E-50 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PRINTS PR00934 X-His dipeptidase (M25) signature 202 219 3.0E-50 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PRINTS PR00934 X-His dipeptidase (M25) signature 445 467 3.0E-50 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PRINTS PR00934 X-His dipeptidase (M25) signature 247 266 3.0E-50 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PRINTS PR00934 X-His dipeptidase (M25) signature 99 117 3.0E-50 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PRINTS PR00934 X-His dipeptidase (M25) signature 78 97 3.0E-50 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PRINTS PR00934 X-His dipeptidase (M25) signature 423 439 3.0E-50 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PRINTS PR00934 X-His dipeptidase (M25) signature 157 175 3.0E-50 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PANTHER PTHR11014 200 302 1.3E-163 T 23-04-2016 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PANTHER PTHR11014 388 477 1.3E-163 T 23-04-2016 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PANTHER PTHR11014 4 183 1.3E-163 T 23-04-2016 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 Gene3D G3DSA:3.40.630.10 393 477 2.0E-96 T 23-04-2016 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 Gene3D G3DSA:3.40.630.10 2 179 2.0E-96 T 23-04-2016 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 SUPERFAMILY SSF53187 393 477 3.55E-59 T 23-04-2016 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 SUPERFAMILY SSF53187 9 180 3.55E-59 T 23-04-2016 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PANTHER PTHR11014:SF54 200 302 1.3E-163 T 23-04-2016 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PANTHER PTHR11014:SF54 388 477 1.3E-163 T 23-04-2016 CLI_RS14275 139c1363064a2a00a097242a07e1b956 478 PANTHER PTHR11014:SF54 4 183 1.3E-163 T 23-04-2016 CLI_RS13215 b56f6efec0f85a1ae1a2f94dd67e372a 255 PANTHER PTHR30435:SF16 1 251 4.0E-103 T 23-04-2016 CLI_RS13215 b56f6efec0f85a1ae1a2f94dd67e372a 255 PANTHER PTHR30435 1 251 4.0E-103 T 23-04-2016 CLI_RS13215 b56f6efec0f85a1ae1a2f94dd67e372a 255 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 249 5.4E-18 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLI_RS13215 b56f6efec0f85a1ae1a2f94dd67e372a 255 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 140 1.2E-36 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLI_RS13215 b56f6efec0f85a1ae1a2f94dd67e372a 255 Pfam PF00460 Flagella basal body rod protein 5 35 8.4E-11 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLI_RS13215 b56f6efec0f85a1ae1a2f94dd67e372a 255 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CLI_RS13215 b56f6efec0f85a1ae1a2f94dd67e372a 255 SUPERFAMILY SSF117143 92 212 1.29E-22 T 23-04-2016 CLI_RS03535 d5e6ead55b015e554016c41a28a76233 155 Gene3D G3DSA:1.10.238.10 84 122 7.8E-4 T 23-04-2016 IPR011992 EF-hand domain pair CLI_RS05355 51582adcea8768d7098e04c768f6ebcd 162 Pfam PF12724 Flavodoxin domain 4 141 1.3E-32 T 23-04-2016 IPR026816 Flavodoxin domain CLI_RS05355 51582adcea8768d7098e04c768f6ebcd 162 SUPERFAMILY SSF52218 1 152 4.49E-22 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS05355 51582adcea8768d7098e04c768f6ebcd 162 Gene3D G3DSA:3.40.50.360 1 99 8.5E-15 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS05355 51582adcea8768d7098e04c768f6ebcd 162 PANTHER PTHR38030:SF1 1 162 2.5E-119 T 23-04-2016 CLI_RS05355 51582adcea8768d7098e04c768f6ebcd 162 PANTHER PTHR38030 1 162 2.5E-119 T 23-04-2016 CLI_RS07030 56f774c116cf02b49a4c390064107721 358 SUPERFAMILY SSF50891 257 356 4.55E-28 T 23-04-2016 IPR029000 Cyclophilin-like domain CLI_RS07030 56f774c116cf02b49a4c390064107721 358 PANTHER PTHR38435 1 358 7.7E-220 T 23-04-2016 CLI_RS07030 56f774c116cf02b49a4c390064107721 358 PANTHER PTHR38435:SF2 1 358 7.7E-220 T 23-04-2016 CLI_RS07030 56f774c116cf02b49a4c390064107721 358 SUPERFAMILY SSF51445 3 238 4.16E-77 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS07030 56f774c116cf02b49a4c390064107721 358 Gene3D G3DSA:3.20.20.70 4 236 1.8E-84 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS07030 56f774c116cf02b49a4c390064107721 358 Pfam PF05913 Bacterial protein of unknown function (DUF871) 4 356 5.2E-125 T 23-04-2016 IPR008589 Protein of unknown function DUF871, prokaryotic CLI_RS07030 56f774c116cf02b49a4c390064107721 358 Gene3D G3DSA:2.40.100.10 241 355 3.5E-36 T 23-04-2016 IPR029000 Cyclophilin-like domain CLI_RS13280 32438f1ded32ad88519469c6d3c0cd15 247 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 59 1.4E-19 T 23-04-2016 IPR025713 Motility protein B, N-terminal domain CLI_RS13280 32438f1ded32ad88519469c6d3c0cd15 247 SUPERFAMILY SSF103088 120 237 6.8E-32 T 23-04-2016 IPR006665 OmpA-like domain CLI_RS13280 32438f1ded32ad88519469c6d3c0cd15 247 PANTHER PTHR30329:SF4 4 246 1.8E-87 T 23-04-2016 CLI_RS13280 32438f1ded32ad88519469c6d3c0cd15 247 Pfam PF00691 OmpA family 132 231 1.7E-20 T 23-04-2016 IPR006665 OmpA-like domain CLI_RS13280 32438f1ded32ad88519469c6d3c0cd15 247 Gene3D G3DSA:3.30.1330.60 112 237 6.5E-35 T 23-04-2016 IPR006665 OmpA-like domain CLI_RS13280 32438f1ded32ad88519469c6d3c0cd15 247 PANTHER PTHR30329 4 246 1.8E-87 T 23-04-2016 CLI_RS00815 ecd50257711350dd1d2bdf446f9d6c18 72 PANTHER PTHR33280 1 69 8.8E-40 T 23-04-2016 CLI_RS00815 ecd50257711350dd1d2bdf446f9d6c18 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-19 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS00815 ecd50257711350dd1d2bdf446f9d6c18 72 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.0E-19 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS00815 ecd50257711350dd1d2bdf446f9d6c18 72 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.0E-19 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS00815 ecd50257711350dd1d2bdf446f9d6c18 72 PANTHER PTHR33280:SF2 1 69 8.8E-40 T 23-04-2016 CLI_RS00815 ecd50257711350dd1d2bdf446f9d6c18 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 28.868 T 23-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS00815 ecd50257711350dd1d2bdf446f9d6c18 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS00815 ecd50257711350dd1d2bdf446f9d6c18 72 SUPERFAMILY SSF143800 1 66 7.06E-27 T 23-04-2016 CLI_RS00815 ecd50257711350dd1d2bdf446f9d6c18 72 Pfam PF01197 Ribosomal protein L31 1 65 1.0E-32 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS00815 ecd50257711350dd1d2bdf446f9d6c18 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 1.5E-31 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS01475 59233bb06f73d05119525237f6764c1e 170 Pfam PF13420 Acetyltransferase (GNAT) domain 32 164 4.8E-7 T 23-04-2016 CLI_RS01475 59233bb06f73d05119525237f6764c1e 170 SUPERFAMILY SSF55729 10 163 8.95E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS01475 59233bb06f73d05119525237f6764c1e 170 Gene3D G3DSA:3.40.630.30 6 162 1.4E-33 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS10520 db4294df53e3e04adf83b183ac0c3fba 96 SMART SM00877 4 80 1.3E-35 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS10520 db4294df53e3e04adf83b183ac0c3fba 96 PANTHER PTHR33941 1 89 1.9E-44 T 23-04-2016 CLI_RS10520 db4294df53e3e04adf83b183ac0c3fba 96 SUPERFAMILY SSF143414 3 91 4.32E-32 T 23-04-2016 CLI_RS10520 db4294df53e3e04adf83b183ac0c3fba 96 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 48 3.0E-17 T 23-04-2016 CLI_RS10520 db4294df53e3e04adf83b183ac0c3fba 96 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 23-04-2016 IPR020808 Bacterial microcompartments protein, conserved site CLI_RS10520 db4294df53e3e04adf83b183ac0c3fba 96 Pfam PF00936 BMC domain 5 80 8.5E-28 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS03185 46d71acef52b44fe72fb1d6717eb4c29 288 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 280 2.8E-84 T 23-04-2016 IPR003797 DegV CLI_RS03185 46d71acef52b44fe72fb1d6717eb4c29 288 PANTHER PTHR33434 1 283 1.2E-109 T 23-04-2016 CLI_RS03185 46d71acef52b44fe72fb1d6717eb4c29 288 Gene3D G3DSA:3.40.50.10170 3 150 7.4E-40 T 23-04-2016 CLI_RS03185 46d71acef52b44fe72fb1d6717eb4c29 288 Gene3D G3DSA:3.30.1180.10 151 282 2.5E-39 T 23-04-2016 CLI_RS03185 46d71acef52b44fe72fb1d6717eb4c29 288 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 279 5.5E-88 T 23-04-2016 IPR003797 DegV CLI_RS03185 46d71acef52b44fe72fb1d6717eb4c29 288 SUPERFAMILY SSF82549 2 280 2.62E-77 T 23-04-2016 CLI_RS03185 46d71acef52b44fe72fb1d6717eb4c29 288 PANTHER PTHR33434:SF3 1 283 1.2E-109 T 23-04-2016 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 674 682 - T 23-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 Gene3D G3DSA:3.30.230.10 588 768 1.6E-71 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 SUPERFAMILY SSF88697 7 199 1.71E-39 T 23-04-2016 IPR015947 PUA-like domain CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 568 770 2.7E-95 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 PIRSF PIRSF001174 1 773 0.0 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 SMART SM00464 7 200 4.6E-60 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 7 199 7.5E-39 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 PANTHER PTHR10046 3 773 0.0 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 SUPERFAMILY SSF54211 593 768 5.69E-53 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 SMART SM00382 346 493 2.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 701 720 2.1E-54 T 23-04-2016 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 354 373 2.1E-54 T 23-04-2016 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 593 609 2.1E-54 T 23-04-2016 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 671 690 2.1E-54 T 23-04-2016 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 724 742 2.1E-54 T 23-04-2016 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 Hamap MF_01973 Lon protease [lon]. 8 770 69.552 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 350 487 2.1E-22 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 SUPERFAMILY SSF52540 307 589 1.82E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 Gene3D G3DSA:3.40.50.300 305 498 6.5E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 PANTHER PTHR10046:SF24 3 773 0.0 T 23-04-2016 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 Gene3D G3DSA:1.10.8.60 499 582 1.2E-28 T 23-04-2016 CLI_RS16430 14fbebd48926fde01d14afb4e66c6bb5 773 TIGRFAM TIGR00763 lon: endopeptidase La 9 769 3.9E-298 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CLI_RS04995 cc3d9af21f2bc89823f3166eb30e49b8 182 Gene3D G3DSA:3.40.630.30 17 180 6.2E-34 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04995 cc3d9af21f2bc89823f3166eb30e49b8 182 Pfam PF00583 Acetyltransferase (GNAT) family 74 153 1.4E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS04995 cc3d9af21f2bc89823f3166eb30e49b8 182 PANTHER PTHR23091 15 180 4.3E-21 T 23-04-2016 CLI_RS04995 cc3d9af21f2bc89823f3166eb30e49b8 182 SUPERFAMILY SSF55729 15 181 2.92E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04660 96464daa83dcbd5d53e16aa93e005a81 225 Gene3D G3DSA:3.40.50.2300 2 120 6.7E-35 T 23-04-2016 CLI_RS04660 96464daa83dcbd5d53e16aa93e005a81 225 SUPERFAMILY SSF52172 1 174 2.93E-37 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS04660 96464daa83dcbd5d53e16aa93e005a81 225 Pfam PF00072 Response regulator receiver domain 3 112 4.3E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS04660 96464daa83dcbd5d53e16aa93e005a81 225 PANTHER PTHR26402:SF50 1 225 1.0E-79 T 23-04-2016 CLI_RS04660 96464daa83dcbd5d53e16aa93e005a81 225 SMART SM00448 1 111 7.2E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS04660 96464daa83dcbd5d53e16aa93e005a81 225 Gene3D G3DSA:1.10.10.10 126 223 1.2E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04660 96464daa83dcbd5d53e16aa93e005a81 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 1.0E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS04660 96464daa83dcbd5d53e16aa93e005a81 225 PANTHER PTHR26402 1 225 1.0E-79 T 23-04-2016 CLI_RS04660 96464daa83dcbd5d53e16aa93e005a81 225 SMART SM00862 146 223 1.0E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 PANTHER PTHR11655:SF14 1 180 1.3E-91 T 23-04-2016 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 4.9E-76 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 SUPERFAMILY SSF56053 84 178 2.27E-36 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 PIRSF PIRSF002162 1 178 1.2E-46 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 23-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 PANTHER PTHR11655 1 180 1.3E-91 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 SUPERFAMILY SSF56053 1 83 1.18E-25 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 Gene3D G3DSA:3.90.930.12 2 83 6.3E-31 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 Pfam PF00347 Ribosomal protein L6 91 165 3.3E-20 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 Pfam PF00347 Ribosomal protein L6 11 83 6.1E-19 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 PRINTS PR00059 Ribosomal protein L6 signature 100 116 2.0E-34 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 PRINTS PR00059 Ribosomal protein L6 signature 142 163 2.0E-34 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 PRINTS PR00059 Ribosomal protein L6 signature 72 97 2.0E-34 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 38.645 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS17765 1030abe82876241daa5c09fecc78e037 180 Gene3D G3DSA:3.90.930.12 84 178 7.4E-40 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 SUPERFAMILY SSF47781 78 156 2.22E-11 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 Pfam PF14490 Helix-hairpin-helix containing domain 138 228 7.7E-33 T 23-04-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 SMART SM00382 332 451 4.7E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 4 728 5.1E-212 T 23-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 1 735 28.714 T 23-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 Pfam PF14520 Helix-hairpin-helix domain 88 133 2.0E-8 T 23-04-2016 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 Pfam PF13538 UvrD-like helicase C-terminal domain 659 706 6.1E-18 T 23-04-2016 IPR027785 UvrD-like helicase C-terminal domain CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 Gene3D G3DSA:3.40.50.300 130 158 8.9E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 Gene3D G3DSA:3.40.50.300 653 727 8.9E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 SUPERFAMILY SSF52540 312 711 1.53E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 Pfam PF13604 AAA domain 320 505 1.0E-47 T 23-04-2016 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 Gene3D G3DSA:3.40.50.300 284 501 5.6E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 PANTHER PTHR10887:SF284 105 170 1.5E-134 T 23-04-2016 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 PANTHER PTHR10887:SF284 659 741 1.5E-134 T 23-04-2016 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 PANTHER PTHR10887:SF284 316 577 1.5E-134 T 23-04-2016 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 SMART SM00278 81 102 920.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 SMART SM00278 116 135 2.1 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 SMART SM00278 180 199 320.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 PANTHER PTHR10887 105 170 1.5E-134 T 23-04-2016 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 PANTHER PTHR10887 659 741 1.5E-134 T 23-04-2016 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 PANTHER PTHR10887 316 577 1.5E-134 T 23-04-2016 CLI_RS01000 eb36f1a1bfc3834078570048f8568eff 744 Gene3D G3DSA:1.10.150.20 88 129 1.3E-6 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 SMART SM00091 141 215 2.5 T 23-04-2016 IPR000014 PAS domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 SMART SM00091 267 332 0.0055 T 23-04-2016 IPR000014 PAS domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 138 262 1.4E-9 T 23-04-2016 IPR000014 PAS domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 264 391 5.0E-14 T 23-04-2016 IPR000014 PAS domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 Pfam PF13487 HD domain 617 678 1.0E-22 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 Pfam PF13188 PAS domain 141 207 4.8E-4 T 23-04-2016 IPR000014 PAS domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 SUPERFAMILY SSF55785 252 381 4.54E-18 T 23-04-2016 IPR000014 PAS domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 SMART SM00267 384 553 2.6E-41 T 23-04-2016 IPR000160 GGDEF domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 Gene3D G3DSA:1.10.3210.10 563 723 8.8E-24 T 23-04-2016 IPR006674 HD domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 Gene3D G3DSA:3.30.70.270 396 539 1.2E-36 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 Gene3D G3DSA:3.30.450.20 132 253 3.8E-16 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 SUPERFAMILY SSF109604 566 724 4.59E-36 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 Pfam PF13426 PAS domain 278 383 2.6E-10 T 23-04-2016 IPR000014 PAS domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 SMART SM00471 561 696 5.2E-8 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 SUPERFAMILY SSF55073 400 539 1.1E-33 T 23-04-2016 IPR029787 Nucleotide cyclase CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 PANTHER PTHR10799 425 544 7.0E-21 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 PANTHER PTHR10799 636 714 7.0E-21 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 PANTHER PTHR10799 563 590 7.0E-21 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 PANTHER PTHR10799 55 67 7.0E-21 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 SUPERFAMILY SSF55785 130 233 9.83E-12 T 23-04-2016 IPR000014 PAS domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 Gene3D G3DSA:3.30.450.20 254 381 2.9E-20 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 391 540 1.3E-37 T 23-04-2016 IPR000160 GGDEF domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 Pfam PF00990 Diguanylate cyclase, GGDEF domain 395 539 2.4E-35 T 23-04-2016 IPR000160 GGDEF domain CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 PANTHER PTHR10799:SF660 425 544 7.0E-21 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 PANTHER PTHR10799:SF660 636 714 7.0E-21 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 PANTHER PTHR10799:SF660 563 590 7.0E-21 T 23-04-2016 CLI_RS07830 9b0eda770d8c171eb5349700ea0b1d03 732 PANTHER PTHR10799:SF660 55 67 7.0E-21 T 23-04-2016 CLI_RS07120 5e31e5278078c850fd1b7d8ab270c636 588 Gene3D G3DSA:3.40.50.300 307 438 3.5E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07120 5e31e5278078c850fd1b7d8ab270c636 588 SMART SM00490 316 405 1.6E-19 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS07120 5e31e5278078c850fd1b7d8ab270c636 588 Pfam PF00271 Helicase conserved C-terminal domain 302 405 2.8E-12 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS07120 5e31e5278078c850fd1b7d8ab270c636 588 SUPERFAMILY SSF52540 141 414 1.82E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07120 5e31e5278078c850fd1b7d8ab270c636 588 Pfam PF12513 Mitochondrial degradasome RNA helicase subunit C terminal 538 584 4.1E-9 T 23-04-2016 IPR022192 Mitochondrial degradasome RNA helicase subunit, C-terminal domain GO:0016817 CLI_RS07120 5e31e5278078c850fd1b7d8ab270c636 588 PANTHER PTHR12131 6 585 0.0 T 23-04-2016 CLI_RS07120 5e31e5278078c850fd1b7d8ab270c636 588 Gene3D G3DSA:3.40.50.300 149 250 2.7E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07120 5e31e5278078c850fd1b7d8ab270c636 588 PANTHER PTHR12131:SF4 6 585 0.0 T 23-04-2016 CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 Gene3D G3DSA:2.30.30.30 112 173 3.0E-27 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 8 173 7.0E-59 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 SUPERFAMILY SSF50104 117 173 5.62E-18 T 23-04-2016 IPR008991 Translation protein SH3-like domain CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 Pfam PF00467 KOW motif 122 148 6.4E-5 T 23-04-2016 IPR005824 KOW CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 5 173 23.385 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 PRINTS PR00338 Transcription termination factor NUSG signature 131 146 2.5E-17 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 PRINTS PR00338 Transcription termination factor NUSG signature 149 165 2.5E-17 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 PRINTS PR00338 Transcription termination factor NUSG signature 60 72 2.5E-17 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 ProSitePatterns PS01014 Transcription termination factor nusG signature. 156 165 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 SMART SM00739 119 146 0.0012 T 23-04-2016 IPR005824 KOW CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 PANTHER PTHR30265 1 174 7.1E-71 T 23-04-2016 CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 Pfam PF02357 Transcription termination factor nusG 7 108 2.3E-29 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 SMART SM00738 5 113 6.3E-43 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 SUPERFAMILY SSF82679 6 112 4.32E-39 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CLI_RS17905 e6be883fecc55dee092604b0990e82d8 174 Gene3D G3DSA:3.30.70.940 6 109 1.0E-42 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 SUPERFAMILY SSF54862 3 58 3.24E-19 T 23-04-2016 CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 PANTHER PTHR10909 182 385 5.6E-54 T 23-04-2016 CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 SMART SM00893 71 260 6.5E-59 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 335 361 - T 23-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 Gene3D G3DSA:3.30.70.20 5 61 8.0E-14 T 23-04-2016 CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 Gene3D G3DSA:3.40.50.1220 265 392 1.5E-55 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 SUPERFAMILY SSF52402 69 265 2.72E-60 T 23-04-2016 CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 SUPERFAMILY SSF52467 271 390 3.0E-48 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 Gene3D G3DSA:3.40.50.620 69 263 6.4E-83 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 272 354 3.9E-34 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 PIRSF PIRSF000089 67 396 1.2E-121 T 23-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 Pfam PF01012 Electron transfer flavoprotein domain 71 250 5.0E-51 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 Pfam PF00037 4Fe-4S binding domain 3 25 4.7E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS16815 469e2016ae5fad31edc52d02d3f02955 398 Pfam PF00037 4Fe-4S binding domain 35 54 4.9E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS11515 a772d76bea62ce2d358450c50b3a6d82 274 SUPERFAMILY SSF52540 49 249 1.07E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11515 a772d76bea62ce2d358450c50b3a6d82 274 Pfam PF00488 MutS domain V 86 250 3.2E-24 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS11515 a772d76bea62ce2d358450c50b3a6d82 274 PANTHER PTHR11361 13 241 1.0E-40 T 23-04-2016 CLI_RS11515 a772d76bea62ce2d358450c50b3a6d82 274 SMART SM00534 82 262 2.3E-8 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS11515 a772d76bea62ce2d358450c50b3a6d82 274 Gene3D G3DSA:3.40.50.300 49 258 1.1E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18485 167eaf62d2d1c01324985d5b140ec5f1 457 Pfam PF00474 Sodium:solute symporter family 31 415 2.1E-24 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS18485 167eaf62d2d1c01324985d5b140ec5f1 457 PANTHER PTHR11819:SF12 1 423 1.4E-71 T 23-04-2016 CLI_RS18485 167eaf62d2d1c01324985d5b140ec5f1 457 PANTHER PTHR11819 1 423 1.4E-71 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS18555 3475f96db14738c1fc1a80aa4f6ddd2c 412 SUPERFAMILY SSF53901 2 250 3.84E-77 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS18555 3475f96db14738c1fc1a80aa4f6ddd2c 412 Gene3D G3DSA:3.40.47.10 262 410 2.9E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS18555 3475f96db14738c1fc1a80aa4f6ddd2c 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 245 1.9E-60 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal CLI_RS18555 3475f96db14738c1fc1a80aa4f6ddd2c 412 SUPERFAMILY SSF53901 213 410 6.31E-71 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS18555 3475f96db14738c1fc1a80aa4f6ddd2c 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 408 3.0E-194 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 CLI_RS18555 3475f96db14738c1fc1a80aa4f6ddd2c 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 367 1.3E-39 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal CLI_RS18555 3475f96db14738c1fc1a80aa4f6ddd2c 412 Gene3D G3DSA:3.40.47.10 1 258 8.6E-79 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS18555 3475f96db14738c1fc1a80aa4f6ddd2c 412 PANTHER PTHR11712 2 410 3.7E-209 T 23-04-2016 CLI_RS18555 3475f96db14738c1fc1a80aa4f6ddd2c 412 PIRSF PIRSF000447 1 412 5.9E-184 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 CLI_RS18555 3475f96db14738c1fc1a80aa4f6ddd2c 412 SMART SM00825 Beta-ketoacyl synthase 5 410 8.4E-16 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLI_RS07060 c8381c042957425686601ba43edaf654 90 Pfam PF07870 Protein of unknown function (DUF1657) 8 55 1.1E-17 T 23-04-2016 IPR012452 Protein of unknown function DUF1657 CLI_RS09300 e834136caea651605901fe5952b7ebc3 247 SUPERFAMILY SSF52096 4 177 6.71E-28 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS09300 e834136caea651605901fe5952b7ebc3 247 PANTHER PTHR10381:SF23 10 214 3.4E-23 T 23-04-2016 CLI_RS09300 e834136caea651605901fe5952b7ebc3 247 Pfam PF00574 Clp protease 45 177 7.8E-20 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLI_RS09300 e834136caea651605901fe5952b7ebc3 247 PANTHER PTHR10381 10 214 3.4E-23 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLI_RS09300 e834136caea651605901fe5952b7ebc3 247 Gene3D G3DSA:3.90.226.10 3 187 2.1E-28 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 SUPERFAMILY SSF50249 136 202 7.18E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 SUPERFAMILY SSF54814 285 346 1.9E-17 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 SMART SM00316 137 203 0.0014 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 SUPERFAMILY SSF54814 203 280 3.86E-32 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 Pfam PF13184 NusA-like KH domain 233 301 1.7E-27 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 Gene3D G3DSA:3.30.1480.10 1 127 1.1E-41 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 347 2.2E-134 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 PANTHER PTHR22648:SF0 1 437 2.0E-157 T 23-04-2016 CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 Gene3D G3DSA:3.30.300.20 283 350 1.3E-32 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 Gene3D G3DSA:3.30.300.20 202 280 7.2E-38 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 Pfam PF08529 NusA N-terminal domain 4 127 1.4E-41 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 SMART SM00322 233 306 1.6 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 SMART SM00322 307 398 0.0064 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 Gene3D G3DSA:2.40.50.140 140 201 9.6E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 SUPERFAMILY SSF69705 1 129 5.75E-38 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 439 30.714 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CLI_RS12075 ed32bc7d779469363f7c8bd3cb5db108 439 PANTHER PTHR22648 1 437 2.0E-157 T 23-04-2016 CLI_RS04830 f16272da38c570841009d7a8c61375d4 493 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 486 1.1E-164 T 23-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 CLI_RS04830 f16272da38c570841009d7a8c61375d4 493 SUPERFAMILY SSF52317 247 432 4.59E-33 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS04830 f16272da38c570841009d7a8c61375d4 493 PANTHER PTHR21343:SF1 1 490 2.9E-223 T 23-04-2016 CLI_RS04830 f16272da38c570841009d7a8c61375d4 493 SUPERFAMILY SSF52540 1 227 3.93E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04830 f16272da38c570841009d7a8c61375d4 493 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 493 172.617 T 23-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 CLI_RS04830 f16272da38c570841009d7a8c61375d4 493 PANTHER PTHR21343 1 490 2.9E-223 T 23-04-2016 CLI_RS04830 f16272da38c570841009d7a8c61375d4 493 Gene3D G3DSA:3.40.50.880 247 446 1.6E-29 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS04830 f16272da38c570841009d7a8c61375d4 493 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 248 437 1.1E-61 T 23-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 CLI_RS04830 f16272da38c570841009d7a8c61375d4 493 Gene3D G3DSA:3.40.50.300 2 233 7.3E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04830 f16272da38c570841009d7a8c61375d4 493 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 224 6.7E-28 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS17470 ee13526255c53907f82030a02bc5d078 197 SUPERFAMILY SSF55174 5 197 7.07E-60 T 23-04-2016 CLI_RS17470 ee13526255c53907f82030a02bc5d078 197 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 4 197 1.6E-65 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLI_RS17470 ee13526255c53907f82030a02bc5d078 197 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 4 87 6.3E-21 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CLI_RS17470 ee13526255c53907f82030a02bc5d078 197 SMART SM01390 3 87 1.0E-28 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CLI_RS17470 ee13526255c53907f82030a02bc5d078 197 Pfam PF01479 S4 domain 89 135 9.9E-21 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS17470 ee13526255c53907f82030a02bc5d078 197 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 197 30.692 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLI_RS17470 ee13526255c53907f82030a02bc5d078 197 PANTHER PTHR11831:SF4 1 197 1.9E-71 T 23-04-2016 CLI_RS17470 ee13526255c53907f82030a02bc5d078 197 SMART SM00363 88 153 2.9E-18 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS17470 ee13526255c53907f82030a02bc5d078 197 Gene3D G3DSA:1.10.1050.10 1 91 2.0E-31 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CLI_RS17470 ee13526255c53907f82030a02bc5d078 197 PANTHER PTHR11831 1 197 1.9E-71 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 CLI_RS17470 ee13526255c53907f82030a02bc5d078 197 Gene3D G3DSA:3.10.290.10 92 188 4.7E-30 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS17810 39f1e80d50c9a78d6942c57364286834 223 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.6E-95 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CLI_RS17810 39f1e80d50c9a78d6942c57364286834 223 Pfam PF00189 Ribosomal protein S3, C-terminal domain 121 203 1.7E-40 T 23-04-2016 CLI_RS17810 39f1e80d50c9a78d6942c57364286834 223 PANTHER PTHR11760:SF19 2 217 6.4E-132 T 23-04-2016 CLI_RS17810 39f1e80d50c9a78d6942c57364286834 223 SMART SM00322 60 126 7.3E-10 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CLI_RS17810 39f1e80d50c9a78d6942c57364286834 223 ProSitePatterns PS00548 Ribosomal protein S3 signature. 164 198 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site CLI_RS17810 39f1e80d50c9a78d6942c57364286834 223 SUPERFAMILY SSF54821 108 207 2.22E-39 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 CLI_RS17810 39f1e80d50c9a78d6942c57364286834 223 PANTHER PTHR11760 2 217 6.4E-132 T 23-04-2016 CLI_RS17810 39f1e80d50c9a78d6942c57364286834 223 Gene3D G3DSA:3.30.300.20 17 108 9.5E-33 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CLI_RS17810 39f1e80d50c9a78d6942c57364286834 223 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 207 38.662 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CLI_RS17810 39f1e80d50c9a78d6942c57364286834 223 Pfam PF07650 KH domain 38 111 5.7E-20 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 CLI_RS17810 39f1e80d50c9a78d6942c57364286834 223 SUPERFAMILY SSF54814 2 107 4.45E-38 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CLI_RS17810 39f1e80d50c9a78d6942c57364286834 223 Gene3D G3DSA:3.30.1140.32 110 208 1.5E-45 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 CLI_RS18210 75029c4c8d96fbb21156c42981cedb9a 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.8E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CLI_RS18210 75029c4c8d96fbb21156c42981cedb9a 92 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.8E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CLI_RS18210 75029c4c8d96fbb21156c42981cedb9a 92 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.8E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CLI_RS18210 75029c4c8d96fbb21156c42981cedb9a 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CLI_RS18210 75029c4c8d96fbb21156c42981cedb9a 92 Gene3D G3DSA:4.10.520.10 1 91 4.3E-38 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CLI_RS18210 75029c4c8d96fbb21156c42981cedb9a 92 PANTHER PTHR33175 1 90 7.2E-41 T 23-04-2016 CLI_RS18210 75029c4c8d96fbb21156c42981cedb9a 92 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.9E-34 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CLI_RS18210 75029c4c8d96fbb21156c42981cedb9a 92 SUPERFAMILY SSF47729 1 90 8.1E-33 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CLI_RS18210 75029c4c8d96fbb21156c42981cedb9a 92 SMART SM00411 1 90 5.8E-44 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CLI_RS03510 0dcc58a05858c2fb2db33c36eb79da03 410 Gene3D G3DSA:3.40.50.360 247 397 2.8E-42 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS03510 0dcc58a05858c2fb2db33c36eb79da03 410 Gene3D G3DSA:3.60.15.10 1 242 6.1E-81 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS03510 0dcc58a05858c2fb2db33c36eb79da03 410 PANTHER PTHR32145:SF2 2 404 1.9E-156 T 23-04-2016 CLI_RS03510 0dcc58a05858c2fb2db33c36eb79da03 410 PIRSF PIRSF005243 1 408 2.7E-131 T 23-04-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CLI_RS03510 0dcc58a05858c2fb2db33c36eb79da03 410 SUPERFAMILY SSF52218 249 396 6.81E-29 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS03510 0dcc58a05858c2fb2db33c36eb79da03 410 SUPERFAMILY SSF56281 10 283 1.57E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS03510 0dcc58a05858c2fb2db33c36eb79da03 410 Pfam PF00258 Flavodoxin 253 357 4.4E-8 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLI_RS03510 0dcc58a05858c2fb2db33c36eb79da03 410 PANTHER PTHR32145 2 404 1.9E-156 T 23-04-2016 CLI_RS03510 0dcc58a05858c2fb2db33c36eb79da03 410 SMART SM00849 34 223 8.7E-23 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS13620 afe74bf034b11c062a3bd74b7a89c86e 621 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 240 7.5E-65 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CLI_RS13620 afe74bf034b11c062a3bd74b7a89c86e 621 Pfam PF00460 Flagella basal body rod protein 8 37 5.5E-8 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLI_RS13620 afe74bf034b11c062a3bd74b7a89c86e 621 PRINTS PR01005 Flagellar hook-associated protein signature 167 191 1.9E-6 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CLI_RS13620 afe74bf034b11c062a3bd74b7a89c86e 621 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 1.9E-6 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CLI_RS13620 afe74bf034b11c062a3bd74b7a89c86e 621 PRINTS PR01005 Flagellar hook-associated protein signature 476 495 1.9E-6 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CLI_RS13620 afe74bf034b11c062a3bd74b7a89c86e 621 PANTHER PTHR30033:SF1 2 620 9.1E-119 T 23-04-2016 CLI_RS13620 afe74bf034b11c062a3bd74b7a89c86e 621 SUPERFAMILY SSF64518 347 384 1.7E-18 T 23-04-2016 CLI_RS13620 afe74bf034b11c062a3bd74b7a89c86e 621 SUPERFAMILY SSF64518 150 250 1.7E-18 T 23-04-2016 CLI_RS13620 afe74bf034b11c062a3bd74b7a89c86e 621 SUPERFAMILY SSF64518 418 619 1.7E-18 T 23-04-2016 CLI_RS13620 afe74bf034b11c062a3bd74b7a89c86e 621 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 564 617 3.9E-11 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLI_RS13620 afe74bf034b11c062a3bd74b7a89c86e 621 PANTHER PTHR30033 2 620 9.1E-119 T 23-04-2016 CLI_RS13080 9656bb32122e6fb448c9d362a0882741 233 SUPERFAMILY SSF53448 5 202 1.88E-33 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS13080 9656bb32122e6fb448c9d362a0882741 233 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 4 194 1.3E-60 T 23-04-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated CLI_RS13080 9656bb32122e6fb448c9d362a0882741 233 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 51 160 2.0E-26 T 23-04-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated CLI_RS13080 9656bb32122e6fb448c9d362a0882741 233 Gene3D G3DSA:3.90.550.10 4 154 2.6E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS13080 9656bb32122e6fb448c9d362a0882741 233 PANTHER PTHR36529 1 225 2.1E-62 T 23-04-2016 CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 SUPERFAMILY SSF52540 4 246 3.47E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 PANTHER PTHR19211 1 518 0.0 T 23-04-2016 CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 PANTHER PTHR19211:SF65 1 518 0.0 T 23-04-2016 CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 SUPERFAMILY SSF52540 307 505 3.0E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 Pfam PF12848 ABC transporter 230 315 2.0E-22 T 23-04-2016 IPR032781 ABC-transporter extension domain CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 Pfam PF00005 ABC transporter 341 469 1.6E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 Pfam PF00005 ABC transporter 20 191 5.5E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 Gene3D G3DSA:3.40.50.300 124 280 5.5E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 Gene3D G3DSA:3.40.50.300 324 506 2.5E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 Gene3D G3DSA:3.40.50.300 2 90 5.5E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 SMART SM00382 349 507 7.0E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS09055 2475892c8c971d191458ce647b4897e3 518 SMART SM00382 28 238 1.0E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS10475 191359841e657af971c31cf0b3c1937d 156 PANTHER PTHR30461 8 119 2.0E-13 T 23-04-2016 CLI_RS10475 191359841e657af971c31cf0b3c1937d 156 Pfam PF07508 Recombinase 10 118 3.3E-22 T 23-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CLI_RS10475 191359841e657af971c31cf0b3c1937d 156 PANTHER PTHR30461:SF3 8 119 2.0E-13 T 23-04-2016 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.6E-19 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 4.6E-19 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 118 4.6E-19 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 205 221 4.6E-19 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 285 303 4.6E-19 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 4.6E-19 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.5E-18 T 23-04-2016 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 2.5E-18 T 23-04-2016 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 2.5E-18 T 23-04-2016 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 2.5E-18 T 23-04-2016 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 PANTHER PTHR22912 1 350 1.3E-136 T 23-04-2016 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 310 7.8E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 Gene3D G3DSA:3.40.50.720 2 166 1.3E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 SUPERFAMILY SSF51905 1 324 3.19E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 Gene3D G3DSA:3.50.50.60 240 324 5.2E-9 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 Gene3D G3DSA:3.50.50.60 167 239 7.5E-10 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS16960 5b2768c00221b76bab866f8698e7c589 418 PANTHER PTHR22912:SF141 1 350 1.3E-136 T 23-04-2016 CLI_RS17750 32d5b9ba045d88bc024006e3773db5eb 59 PIRSF PIRSF002211 1 59 5.4E-27 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CLI_RS17750 32d5b9ba045d88bc024006e3773db5eb 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.6E-24 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CLI_RS17750 32d5b9ba045d88bc024006e3773db5eb 59 Gene3D G3DSA:3.30.1390.20 2 58 5.1E-29 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CLI_RS17750 32d5b9ba045d88bc024006e3773db5eb 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.341 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CLI_RS17750 32d5b9ba045d88bc024006e3773db5eb 59 Pfam PF00327 Ribosomal protein L30p/L7e 4 53 1.7E-18 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CLI_RS17750 32d5b9ba045d88bc024006e3773db5eb 59 SUPERFAMILY SSF55129 4 58 1.44E-19 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CLI_RS17750 32d5b9ba045d88bc024006e3773db5eb 59 PANTHER PTHR15892 2 58 7.2E-24 T 23-04-2016 CLI_RS17750 32d5b9ba045d88bc024006e3773db5eb 59 PANTHER PTHR15892:SF2 2 58 7.2E-24 T 23-04-2016 CLI_RS04310 9746bb6f81b14c5147ec390e155c932f 78 SMART SM00899 5 77 1.1E-18 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLI_RS04310 9746bb6f81b14c5147ec390e155c932f 78 SUPERFAMILY SSF50037 8 76 1.95E-18 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal CLI_RS04310 9746bb6f81b14c5147ec390e155c932f 78 PANTHER PTHR33238 6 77 1.9E-21 T 23-04-2016 CLI_RS04310 9746bb6f81b14c5147ec390e155c932f 78 Pfam PF04023 FeoA domain 6 76 1.0E-14 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 7.3E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 7.3E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 7.3E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 246 1.0E-105 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 Gene3D G3DSA:3.40.50.720 2 248 1.3E-100 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.6E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.6E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.6E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.6E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.6E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 5.6E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 SUPERFAMILY SSF51735 5 247 1.29E-94 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PANTHER PTHR24322:SF328 11 30 9.7E-65 T 23-04-2016 CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PANTHER PTHR24322:SF328 48 140 9.7E-65 T 23-04-2016 CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PANTHER PTHR24322:SF328 156 188 9.7E-65 T 23-04-2016 CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 192 3.3E-6 T 23-04-2016 CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 246 1.2E-75 T 23-04-2016 CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PANTHER PTHR24322 11 30 9.7E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PANTHER PTHR24322 48 140 9.7E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS18560 2ff4e371b687372344ae2fb7baefdfda 248 PANTHER PTHR24322 156 188 9.7E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS11280 a51a4a1f8c9eea09ec1005a61e085152 189 TIGRFAM TIGR02359 thiW: energy coupling factor transporter S component ThiW 12 159 6.1E-41 T 23-04-2016 IPR012652 Energy coupling factor transporter S component ThiW CLI_RS11280 a51a4a1f8c9eea09ec1005a61e085152 189 PIRSF PIRSF024534 1 166 6.0E-30 T 23-04-2016 IPR012652 Energy coupling factor transporter S component ThiW CLI_RS11280 a51a4a1f8c9eea09ec1005a61e085152 189 Pfam PF09512 Thiamine-precursor transporter protein (ThiW) 12 156 1.7E-47 T 23-04-2016 IPR012652 Energy coupling factor transporter S component ThiW CLI_RS10685 b04d22a784576acd8022725dd80c77ea 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 258 272 1.7E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS10685 b04d22a784576acd8022725dd80c77ea 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 310 1.7E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS10685 b04d22a784576acd8022725dd80c77ea 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 329 1.7E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS10685 b04d22a784576acd8022725dd80c77ea 339 SUPERFAMILY SSF55874 166 330 4.71E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS10685 b04d22a784576acd8022725dd80c77ea 339 PANTHER PTHR24423:SF557 1 334 5.5E-106 T 23-04-2016 CLI_RS10685 b04d22a784576acd8022725dd80c77ea 339 PANTHER PTHR24423 1 334 5.5E-106 T 23-04-2016 CLI_RS10685 b04d22a784576acd8022725dd80c77ea 339 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 224 331 6.1E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS10685 b04d22a784576acd8022725dd80c77ea 339 Gene3D G3DSA:3.30.565.10 183 330 2.3E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS10685 b04d22a784576acd8022725dd80c77ea 339 SUPERFAMILY SSF47384 112 174 1.31E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS10685 b04d22a784576acd8022725dd80c77ea 339 SMART SM00387 220 332 1.6E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS02840 44d89d32dc7ca8aa96ae89d253d44566 617 PANTHER PTHR11785:SF125 515 528 6.2E-191 T 23-04-2016 CLI_RS02840 44d89d32dc7ca8aa96ae89d253d44566 617 PANTHER PTHR11785:SF125 29 473 6.2E-191 T 23-04-2016 CLI_RS02840 44d89d32dc7ca8aa96ae89d253d44566 617 PANTHER PTHR11785 515 528 6.2E-191 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS02840 44d89d32dc7ca8aa96ae89d253d44566 617 PANTHER PTHR11785 29 473 6.2E-191 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS02840 44d89d32dc7ca8aa96ae89d253d44566 617 Pfam PF13520 Amino acid permease 31 434 3.5E-36 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS08595 1df1ebe1dc4fa574c09427617b05e23e 301 PANTHER PTHR10584 1 300 4.5E-118 T 23-04-2016 CLI_RS08595 1df1ebe1dc4fa574c09427617b05e23e 301 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 300 1.6E-106 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CLI_RS08595 1df1ebe1dc4fa574c09427617b05e23e 301 PIRSF PIRSF000535 1 301 1.1E-75 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CLI_RS08595 1df1ebe1dc4fa574c09427617b05e23e 301 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 300 4.7E-109 T 23-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 CLI_RS08595 1df1ebe1dc4fa574c09427617b05e23e 301 SUPERFAMILY SSF53613 1 299 9.51E-63 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS08595 1df1ebe1dc4fa574c09427617b05e23e 301 Gene3D G3DSA:3.40.1190.20 35 300 6.9E-75 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS08595 1df1ebe1dc4fa574c09427617b05e23e 301 Gene3D G3DSA:2.20.150.10 9 34 4.7E-5 T 23-04-2016 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 CLI_RS08595 1df1ebe1dc4fa574c09427617b05e23e 301 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLI_RS08595 1df1ebe1dc4fa574c09427617b05e23e 301 PANTHER PTHR10584:SF170 1 300 4.5E-118 T 23-04-2016 CLI_RS08595 1df1ebe1dc4fa574c09427617b05e23e 301 Pfam PF00294 pfkB family carbohydrate kinase 13 289 8.7E-47 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB CLI_RS17770 6825f377136eac4eabcc6af8109233ea 132 SUPERFAMILY SSF56047 2 132 7.46E-48 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CLI_RS17770 6825f377136eac4eabcc6af8109233ea 132 Gene3D G3DSA:3.30.1370.30 2 73 1.0E-27 T 23-04-2016 CLI_RS17770 6825f377136eac4eabcc6af8109233ea 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CLI_RS17770 6825f377136eac4eabcc6af8109233ea 132 Pfam PF00410 Ribosomal protein S8 5 132 1.4E-50 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CLI_RS17770 6825f377136eac4eabcc6af8109233ea 132 PANTHER PTHR11758 1 132 1.0E-64 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CLI_RS17770 6825f377136eac4eabcc6af8109233ea 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.769 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CLI_RS17770 6825f377136eac4eabcc6af8109233ea 132 Gene3D G3DSA:3.30.1490.10 76 132 4.8E-30 T 23-04-2016 CLI_RS15260 e5bdd3f5037869876bc63bfefefd59cd 422 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 400 2.2E-102 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CLI_RS15260 e5bdd3f5037869876bc63bfefefd59cd 422 PANTHER PTHR30081:SF1 42 402 2.4E-126 T 23-04-2016 CLI_RS15260 e5bdd3f5037869876bc63bfefefd59cd 422 PRINTS PR00702 Acriflavin resistance protein family signature 377 400 1.1E-8 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLI_RS15260 e5bdd3f5037869876bc63bfefefd59cd 422 PRINTS PR00702 Acriflavin resistance protein family signature 249 272 1.1E-8 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLI_RS15260 e5bdd3f5037869876bc63bfefefd59cd 422 PRINTS PR00702 Acriflavin resistance protein family signature 302 326 1.1E-8 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLI_RS15260 e5bdd3f5037869876bc63bfefefd59cd 422 SUPERFAMILY SSF82866 210 403 7.98E-43 T 23-04-2016 CLI_RS15260 e5bdd3f5037869876bc63bfefefd59cd 422 SUPERFAMILY SSF82866 149 167 7.98E-43 T 23-04-2016 CLI_RS15260 e5bdd3f5037869876bc63bfefefd59cd 422 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 163 393 3.2E-73 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLI_RS15260 e5bdd3f5037869876bc63bfefefd59cd 422 PANTHER PTHR30081 42 402 2.4E-126 T 23-04-2016 CLI_RS15260 e5bdd3f5037869876bc63bfefefd59cd 422 Pfam PF02355 Protein export membrane protein 235 399 7.8E-17 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLI_RS15260 e5bdd3f5037869876bc63bfefefd59cd 422 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 7 413 37.622 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CLI_RS15260 e5bdd3f5037869876bc63bfefefd59cd 422 Gene3D G3DSA:1.20.1640.10 210 402 1.5E-24 T 23-04-2016 CLI_RS00820 3b11a81f6109ca2c52f3f7fbedf9cf6b 191 SUPERFAMILY SSF57716 142 190 2.76E-16 T 23-04-2016 CLI_RS00820 3b11a81f6109ca2c52f3f7fbedf9cf6b 191 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 23-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 CLI_RS00820 3b11a81f6109ca2c52f3f7fbedf9cf6b 191 PANTHER PTHR11441 1 191 3.1E-93 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 CLI_RS00820 3b11a81f6109ca2c52f3f7fbedf9cf6b 191 Pfam PF00265 Thymidine kinase 8 187 3.2E-59 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 CLI_RS00820 3b11a81f6109ca2c52f3f7fbedf9cf6b 191 Gene3D G3DSA:3.30.60.20 142 187 9.3E-17 T 23-04-2016 CLI_RS00820 3b11a81f6109ca2c52f3f7fbedf9cf6b 191 Hamap MF_00124 Thymidine kinase [tdk]. 7 190 37.706 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 CLI_RS00820 3b11a81f6109ca2c52f3f7fbedf9cf6b 191 SUPERFAMILY SSF52540 8 141 2.32E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00820 3b11a81f6109ca2c52f3f7fbedf9cf6b 191 PIRSF PIRSF035805 5 191 4.1E-68 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 CLI_RS10565 49f67083ad8e97c427fb3de9820c5817 148 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 4 142 2.1E-31 T 23-04-2016 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CLI_RS10565 49f67083ad8e97c427fb3de9820c5817 148 Gene3D G3DSA:3.40.50.300 5 144 3.7E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10565 49f67083ad8e97c427fb3de9820c5817 148 PANTHER PTHR40453 4 148 5.2E-44 T 23-04-2016 CLI_RS10565 49f67083ad8e97c427fb3de9820c5817 148 PANTHER PTHR40453:SF1 4 148 5.2E-44 T 23-04-2016 CLI_RS10565 49f67083ad8e97c427fb3de9820c5817 148 SUPERFAMILY SSF52540 5 144 7.36E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10565 49f67083ad8e97c427fb3de9820c5817 148 PIRSF PIRSF036409 3 148 7.0E-55 T 23-04-2016 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CLI_RS02480 bb46932775f49b2bb8731d10a2f5df8b 267 PANTHER PTHR18966:SF191 36 261 1.0E-47 T 23-04-2016 CLI_RS02480 bb46932775f49b2bb8731d10a2f5df8b 267 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 63 76 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CLI_RS02480 bb46932775f49b2bb8731d10a2f5df8b 267 SMART SM00062 40 263 2.3E-74 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLI_RS02480 bb46932775f49b2bb8731d10a2f5df8b 267 Gene3D G3DSA:3.40.190.10 37 117 1.2E-46 T 23-04-2016 CLI_RS02480 bb46932775f49b2bb8731d10a2f5df8b 267 Gene3D G3DSA:3.40.190.10 224 264 1.2E-46 T 23-04-2016 CLI_RS02480 bb46932775f49b2bb8731d10a2f5df8b 267 PANTHER PTHR18966 36 261 1.0E-47 T 23-04-2016 CLI_RS02480 bb46932775f49b2bb8731d10a2f5df8b 267 SUPERFAMILY SSF53850 1 263 1.26E-74 T 23-04-2016 CLI_RS02480 bb46932775f49b2bb8731d10a2f5df8b 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 262 8.7E-70 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLI_RS02480 bb46932775f49b2bb8731d10a2f5df8b 267 SMART SM00079 40 262 3.0E-5 T 23-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CLI_RS02480 bb46932775f49b2bb8731d10a2f5df8b 267 Gene3D G3DSA:3.40.190.10 118 223 2.8E-29 T 23-04-2016 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 ProSitePatterns PS00450 Aconitase family signature 1. 289 305 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 PANTHER PTHR11670 2 641 2.2E-273 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 Gene3D G3DSA:3.30.499.10 3 156 6.6E-48 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 Pfam PF00330 Aconitase family (aconitate hydratase) 7 407 7.9E-111 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 PANTHER PTHR11670:SF30 2 641 2.2E-273 T 23-04-2016 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 Gene3D G3DSA:3.20.19.10 459 640 7.2E-48 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 SUPERFAMILY SSF53732 2 417 1.27E-151 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 Gene3D G3DSA:3.30.499.10 270 458 1.9E-59 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 4 638 4.0E-280 T 23-04-2016 IPR006250 Aconitase, putative CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 Pfam PF00694 Aconitase C-terminal domain 514 575 5.7E-25 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 ProSitePatterns PS01244 Aconitase family signature 2. 349 362 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 SUPERFAMILY SSF52016 439 638 1.45E-55 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 Gene3D G3DSA:3.40.1060.10 157 262 1.6E-36 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 PRINTS PR00415 Aconitase family signature 110 123 2.6E-23 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 PRINTS PR00415 Aconitase family signature 186 199 2.6E-23 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 PRINTS PR00415 Aconitase family signature 349 362 2.6E-23 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 PRINTS PR00415 Aconitase family signature 90 98 2.6E-23 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 PRINTS PR00415 Aconitase family signature 200 213 2.6E-23 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS02335 d7149fd02eacf239279e38a4098d5d73 641 PRINTS PR00415 Aconitase family signature 124 139 2.6E-23 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 429 25.095 T 23-04-2016 CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 Gene3D G3DSA:2.40.50.140 4 94 3.3E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 PANTHER PTHR22594 1 429 3.4E-175 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 SUPERFAMILY SSF50249 5 98 2.36E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 PRINTS PR01042 Aspartyl-tRNA synthetase signature 197 210 4.3E-19 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 PRINTS PR01042 Aspartyl-tRNA synthetase signature 384 398 4.3E-19 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 PRINTS PR01042 Aspartyl-tRNA synthetase signature 344 360 4.3E-19 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 PRINTS PR01042 Aspartyl-tRNA synthetase signature 180 192 4.3E-19 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 Pfam PF00152 tRNA synthetases class II (D, K and N) 111 419 6.2E-79 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 Gene3D G3DSA:3.30.930.10 103 427 5.0E-95 T 23-04-2016 CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 PANTHER PTHR22594:SF10 1 429 3.4E-175 T 23-04-2016 IPR004523 Aspartyl-tRNA synthetase, archaeal-type GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 TIGRFAM TIGR00458 aspS_nondisc: aspartate--tRNA(Asn) ligase 15 429 7.4E-135 T 23-04-2016 IPR004523 Aspartyl-tRNA synthetase, archaeal-type GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 Pfam PF01336 OB-fold nucleic acid binding domain 17 90 8.4E-14 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLI_RS05325 ff15e3a582bd2c300f9359af068ef6e5 429 SUPERFAMILY SSF55681 98 427 4.98E-81 T 23-04-2016 CLI_RS03320 6cb9151389587bfd7b29e9b3a9e58ce0 559 Pfam PF00664 ABC transporter transmembrane region 12 282 1.3E-32 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS03320 6cb9151389587bfd7b29e9b3a9e58ce0 559 PANTHER PTHR24221:SF138 5 557 8.4E-128 T 23-04-2016 CLI_RS03320 6cb9151389587bfd7b29e9b3a9e58ce0 559 Gene3D G3DSA:3.40.50.300 324 553 5.7E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03320 6cb9151389587bfd7b29e9b3a9e58ce0 559 Pfam PF00005 ABC transporter 342 488 3.0E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03320 6cb9151389587bfd7b29e9b3a9e58ce0 559 SUPERFAMILY SSF52540 319 558 2.21E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03320 6cb9151389587bfd7b29e9b3a9e58ce0 559 ProSitePatterns PS00211 ABC transporters family signature. 461 475 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS03320 6cb9151389587bfd7b29e9b3a9e58ce0 559 SUPERFAMILY SSF90123 3 310 1.18E-51 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS03320 6cb9151389587bfd7b29e9b3a9e58ce0 559 Gene3D G3DSA:1.20.1560.10 3 307 1.3E-47 T 23-04-2016 CLI_RS03320 6cb9151389587bfd7b29e9b3a9e58ce0 559 PANTHER PTHR24221 5 557 8.4E-128 T 23-04-2016 CLI_RS03320 6cb9151389587bfd7b29e9b3a9e58ce0 559 SMART SM00382 350 536 3.5E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 PIRSF PIRSF001492 1 509 6.3E-216 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 509 51.7 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 PANTHER PTHR31637:SF0 3 509 1.9E-287 T 23-04-2016 CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 4 508 6.8E-228 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 Gene3D G3DSA:3.40.1450.10 78 308 3.0E-99 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 SUPERFAMILY SSF64158 77 307 3.4E-87 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 Pfam PF01676 Metalloenzyme superfamily 4 497 6.6E-81 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 Gene3D G3DSA:3.40.720.10 312 508 2.9E-94 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 Gene3D G3DSA:3.40.720.10 3 77 2.9E-94 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 295 4.7E-89 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 SUPERFAMILY SSF53649 3 77 2.22E-78 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 SUPERFAMILY SSF53649 312 508 2.22E-78 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLI_RS01310 21eea2475709583891e3f4f433041ac3 509 PANTHER PTHR31637 3 509 1.9E-287 T 23-04-2016 CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 PANTHER PTHR32071:SF27 117 630 9.4E-201 T 23-04-2016 CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 SUPERFAMILY SSF55785 190 304 1.24E-8 T 23-04-2016 IPR000014 PAS domain CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 594 611 3.22E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 611 631 3.22E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 Gene3D G3DSA:3.40.50.300 323 500 7.2E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 SMART SM00382 347 491 7.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 414 429 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 Gene3D G3DSA:1.10.10.60 552 630 2.2E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 Pfam PF13426 PAS domain 216 306 5.2E-6 T 23-04-2016 IPR000014 PAS domain CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 541 550 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 Pfam PF00158 Sigma-54 interaction domain 327 494 1.5E-68 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 SUPERFAMILY SSF52540 327 557 6.0E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 Pfam PF02954 Bacterial regulatory protein, Fis family 588 628 6.5E-15 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 Gene3D G3DSA:3.30.450.20 191 305 2.4E-10 T 23-04-2016 CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 351 364 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 PANTHER PTHR32071 117 630 9.4E-201 T 23-04-2016 CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 Gene3D G3DSA:1.10.8.60 501 551 4.2E-19 T 23-04-2016 CLI_RS09805 400e87882ce57a82a387e8f5e108c829 631 SUPERFAMILY SSF46689 541 630 8.19E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS13150 cf5b8c217e9eba0a4b0b8716f55413a9 333 SUPERFAMILY SSF103486 6 329 1.28E-67 T 23-04-2016 IPR002843 ATPase, V0 complex, c/d subunit CLI_RS13150 cf5b8c217e9eba0a4b0b8716f55413a9 333 PANTHER PTHR38682:SF1 1 333 6.4E-129 T 23-04-2016 CLI_RS13150 cf5b8c217e9eba0a4b0b8716f55413a9 333 PANTHER PTHR38682 1 333 6.4E-129 T 23-04-2016 CLI_RS13150 cf5b8c217e9eba0a4b0b8716f55413a9 333 Pfam PF01992 ATP synthase (C/AC39) subunit 10 327 3.9E-62 T 23-04-2016 IPR002843 ATPase, V0 complex, c/d subunit CLI_RS08725 bda8b4152185d64a5cf73a2291eeddbe 67 PANTHER PTHR36107 1 67 7.0E-32 T 23-04-2016 CLI_RS08725 bda8b4152185d64a5cf73a2291eeddbe 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 46 60 - T 23-04-2016 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLI_RS08725 bda8b4152185d64a5cf73a2291eeddbe 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 23-04-2016 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLI_RS08725 bda8b4152185d64a5cf73a2291eeddbe 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 67 8.7E-27 T 23-04-2016 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLI_RS17255 9824f3dd3da6489b70c19666d067bfee 208 Pfam PF03358 NADPH-dependent FMN reductase 1 156 3.3E-32 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLI_RS17255 9824f3dd3da6489b70c19666d067bfee 208 PANTHER PTHR10204:SF43 1 204 8.0E-68 T 23-04-2016 CLI_RS17255 9824f3dd3da6489b70c19666d067bfee 208 PANTHER PTHR10204 1 204 8.0E-68 T 23-04-2016 CLI_RS17255 9824f3dd3da6489b70c19666d067bfee 208 SUPERFAMILY SSF52218 1 186 1.55E-44 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS17255 9824f3dd3da6489b70c19666d067bfee 208 Gene3D G3DSA:3.40.50.360 1 181 9.5E-45 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS03030 ffd2a6e5cdc54db7b3540b3278321a5c 360 SMART SM00382 32 215 6.7E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03030 ffd2a6e5cdc54db7b3540b3278321a5c 360 Gene3D G3DSA:3.40.50.300 4 238 7.8E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03030 ffd2a6e5cdc54db7b3540b3278321a5c 360 PANTHER PTHR24220 7 329 1.3E-154 T 23-04-2016 CLI_RS03030 ffd2a6e5cdc54db7b3540b3278321a5c 360 PANTHER PTHR24220:SF150 7 329 1.3E-154 T 23-04-2016 CLI_RS03030 ffd2a6e5cdc54db7b3540b3278321a5c 360 SUPERFAMILY SSF52540 5 247 1.77E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03030 ffd2a6e5cdc54db7b3540b3278321a5c 360 Pfam PF08402 TOBE domain 281 359 1.8E-8 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CLI_RS03030 ffd2a6e5cdc54db7b3540b3278321a5c 360 SUPERFAMILY SSF50331 240 359 6.23E-11 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal CLI_RS03030 ffd2a6e5cdc54db7b3540b3278321a5c 360 Pfam PF00005 ABC transporter 24 165 9.4E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03030 ffd2a6e5cdc54db7b3540b3278321a5c 360 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS03030 ffd2a6e5cdc54db7b3540b3278321a5c 360 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 38 359 4.8E-123 T 23-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CLI_RS06620 351ada748167fb98b8b9b54c778ce3d0 112 Pfam PF14034 Sporulation protein YtrH 7 105 8.4E-36 T 23-04-2016 IPR025689 Sporulation protein YtrH CLI_RS02215 d8e2a86e353cf3dbfed882c9778b710d 578 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 187 319 3.0E-42 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS02215 d8e2a86e353cf3dbfed882c9778b710d 578 SUPERFAMILY SSF140990 403 578 1.06E-51 T 23-04-2016 CLI_RS02215 d8e2a86e353cf3dbfed882c9778b710d 578 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 110 577 1.1E-166 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLI_RS02215 d8e2a86e353cf3dbfed882c9778b710d 578 ProSitePatterns PS00674 AAA-protein family signature. 290 308 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CLI_RS02215 d8e2a86e353cf3dbfed882c9778b710d 578 Gene3D G3DSA:1.10.8.60 330 393 2.7E-17 T 23-04-2016 CLI_RS02215 d8e2a86e353cf3dbfed882c9778b710d 578 SMART SM00382 183 322 3.5E-22 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS02215 d8e2a86e353cf3dbfed882c9778b710d 578 Gene3D G3DSA:3.40.50.300 149 329 5.0E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02215 d8e2a86e353cf3dbfed882c9778b710d 578 Pfam PF01434 Peptidase family M41 382 577 3.0E-54 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CLI_RS02215 d8e2a86e353cf3dbfed882c9778b710d 578 PANTHER PTHR23076 13 578 8.8E-199 T 23-04-2016 CLI_RS02215 d8e2a86e353cf3dbfed882c9778b710d 578 SUPERFAMILY SSF52540 145 388 1.17E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02215 d8e2a86e353cf3dbfed882c9778b710d 578 PANTHER PTHR23076:SF10 13 578 8.8E-199 T 23-04-2016 CLI_RS02215 d8e2a86e353cf3dbfed882c9778b710d 578 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 577 30.237 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLI_RS13855 a1a8db571c9f44140f2436c67fb09eeb 232 PANTHER PTHR36834:SF1 1 227 4.3E-90 T 23-04-2016 CLI_RS13855 a1a8db571c9f44140f2436c67fb09eeb 232 Pfam PF04892 VanZ like family 45 181 3.0E-22 T 23-04-2016 IPR006976 VanZ-like CLI_RS13855 a1a8db571c9f44140f2436c67fb09eeb 232 PANTHER PTHR36834 1 227 4.3E-90 T 23-04-2016 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PRINTS PR00101 Aspartate carbamoyltransferase signature 57 79 2.6E-6 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PRINTS PR00101 Aspartate carbamoyltransferase signature 164 181 2.6E-6 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PRINTS PR00101 Aspartate carbamoyltransferase signature 95 104 2.6E-6 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 24 176 5.1E-24 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PANTHER PTHR11405 145 192 3.6E-202 T 23-04-2016 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PANTHER PTHR11405 291 392 3.6E-202 T 23-04-2016 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PANTHER PTHR11405 19 123 3.6E-202 T 23-04-2016 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PANTHER PTHR11405 215 275 3.6E-202 T 23-04-2016 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 Gene3D G3DSA:3.40.50.1370 18 175 1.3E-35 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 187 374 4.2E-46 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 67 86 2.6E-8 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 323 332 2.6E-8 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 341 364 2.6E-8 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PANTHER PTHR11405:SF40 145 192 3.6E-202 T 23-04-2016 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PANTHER PTHR11405:SF40 291 392 3.6E-202 T 23-04-2016 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PANTHER PTHR11405:SF40 19 123 3.6E-202 T 23-04-2016 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 PANTHER PTHR11405:SF40 215 275 3.6E-202 T 23-04-2016 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 Gene3D G3DSA:3.40.50.1370 176 362 4.2E-54 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 4 394 1.8E-239 T 23-04-2016 IPR017702 Putative carbamoyltransferase YgeW CLI_RS14370 8bd2272b67512e0b2ac9bd95606a67e0 398 SUPERFAMILY SSF53671 18 374 1.83E-58 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLI_RS02140 bfc549dc3aac35dedc177f4f7a2f9faa 290 PANTHER PTHR30425 2 290 1.9E-106 T 23-04-2016 CLI_RS02140 bfc549dc3aac35dedc177f4f7a2f9faa 290 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 9 288 1.0E-73 T 23-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CLI_RS02140 bfc549dc3aac35dedc177f4f7a2f9faa 290 SUPERFAMILY SSF161098 12 284 6.64E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS02140 bfc549dc3aac35dedc177f4f7a2f9faa 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 288 9.0E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS02140 bfc549dc3aac35dedc177f4f7a2f9faa 290 Gene3D G3DSA:1.10.3720.10 67 288 8.4E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS02140 bfc549dc3aac35dedc177f4f7a2f9faa 290 PANTHER PTHR30425:SF3 2 290 1.9E-106 T 23-04-2016 CLI_RS10555 3a34ffb05ec6b43d3a4844c98d3580c2 281 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 147 160 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CLI_RS10555 3a34ffb05ec6b43d3a4844c98d3580c2 281 SUPERFAMILY SSF53067 144 273 3.12E-27 T 23-04-2016 CLI_RS10555 3a34ffb05ec6b43d3a4844c98d3580c2 281 Gene3D G3DSA:3.30.420.40 154 257 7.1E-39 T 23-04-2016 CLI_RS10555 3a34ffb05ec6b43d3a4844c98d3580c2 281 Pfam PF11104 Type IV pilus assembly protein PilM; 143 257 3.5E-12 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM CLI_RS10555 3a34ffb05ec6b43d3a4844c98d3580c2 281 Gene3D G3DSA:3.30.420.40 13 153 2.0E-25 T 23-04-2016 CLI_RS10555 3a34ffb05ec6b43d3a4844c98d3580c2 281 SUPERFAMILY SSF53067 34 136 4.14E-12 T 23-04-2016 CLI_RS10555 3a34ffb05ec6b43d3a4844c98d3580c2 281 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 36 274 3.4E-98 T 23-04-2016 IPR013366 Ethanolamine utilisation EutJ UniPathway: UPA00560 CLI_RS10555 3a34ffb05ec6b43d3a4844c98d3580c2 281 PANTHER PTHR32432 32 274 1.8E-52 T 23-04-2016 CLI_RS11015 878faa43e7af88621522303812274eb3 383 SUPERFAMILY SSF58104 219 381 1.44E-41 T 23-04-2016 CLI_RS11015 878faa43e7af88621522303812274eb3 383 Gene3D G3DSA:1.10.287.950 217 382 1.3E-38 T 23-04-2016 CLI_RS11015 878faa43e7af88621522303812274eb3 383 SMART SM00283 176 383 6.1E-5 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS11015 878faa43e7af88621522303812274eb3 383 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 241 379 1.5E-24 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS11015 878faa43e7af88621522303812274eb3 383 PANTHER PTHR32089 219 381 5.0E-33 T 23-04-2016 CLI_RS01640 bba0e30b8274b5f3f0abc53bd6cafdb1 143 SUPERFAMILY SSF46785 2 137 1.79E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01640 bba0e30b8274b5f3f0abc53bd6cafdb1 143 Pfam PF02082 Transcriptional regulator 1 81 2.4E-24 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CLI_RS01640 bba0e30b8274b5f3f0abc53bd6cafdb1 143 PANTHER PTHR33221:SF5 2 143 2.8E-75 T 23-04-2016 CLI_RS01640 bba0e30b8274b5f3f0abc53bd6cafdb1 143 Gene3D G3DSA:1.10.10.10 1 142 1.3E-51 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01640 bba0e30b8274b5f3f0abc53bd6cafdb1 143 PANTHER PTHR33221 2 143 2.8E-75 T 23-04-2016 CLI_RS09525 649171f0502011a807ec29e2df0e5766 290 PANTHER PTHR12001 4 255 4.2E-105 T 23-04-2016 IPR017446 Polyprenyl synthetase-related CLI_RS09525 649171f0502011a807ec29e2df0e5766 290 PANTHER PTHR12001:SF23 4 255 4.2E-105 T 23-04-2016 CLI_RS09525 649171f0502011a807ec29e2df0e5766 290 Gene3D G3DSA:1.10.600.10 3 284 1.0E-92 T 23-04-2016 IPR008949 Isoprenoid synthase domain CLI_RS09525 649171f0502011a807ec29e2df0e5766 290 SUPERFAMILY SSF48576 4 273 2.52E-84 T 23-04-2016 IPR008949 Isoprenoid synthase domain CLI_RS09525 649171f0502011a807ec29e2df0e5766 290 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 78 94 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CLI_RS09525 649171f0502011a807ec29e2df0e5766 290 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 209 221 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CLI_RS09525 649171f0502011a807ec29e2df0e5766 290 Pfam PF00348 Polyprenyl synthetase 27 281 4.4E-59 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CLI_RS14760 71d0c9f3f3be5c3f152e4848405a279c 324 SUPERFAMILY SSF53163 1 324 1.73E-117 T 23-04-2016 IPR023430 Peptidase HybD-like domain CLI_RS14760 71d0c9f3f3be5c3f152e4848405a279c 324 Gene3D G3DSA:3.40.50.1450 1 323 1.1E-130 T 23-04-2016 IPR023430 Peptidase HybD-like domain CLI_RS14760 71d0c9f3f3be5c3f152e4848405a279c 324 TIGRFAM TIGR01441 GPR: GPR endopeptidase 3 249 3.2E-105 T 23-04-2016 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLI_RS14760 71d0c9f3f3be5c3f152e4848405a279c 324 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 3 302 8.0E-100 T 23-04-2016 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLI_RS14760 71d0c9f3f3be5c3f152e4848405a279c 324 Hamap MF_00626 Germination protease [gpr]. 1 324 158.984 T 23-04-2016 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLI_RS14760 71d0c9f3f3be5c3f152e4848405a279c 324 Pfam PF03418 Germination protease 9 253 1.2E-87 T 23-04-2016 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLI_RS06855 6b9ee89b7f623e414dd1e04eecf7bcae 252 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 7 88 2.7E-30 T 23-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CLI_RS06855 6b9ee89b7f623e414dd1e04eecf7bcae 252 Pfam PF01478 Type IV leader peptidase family 101 206 7.3E-11 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CLI_RS06855 6b9ee89b7f623e414dd1e04eecf7bcae 252 PANTHER PTHR30487:SF0 1 252 7.4E-91 T 23-04-2016 CLI_RS06855 6b9ee89b7f623e414dd1e04eecf7bcae 252 PANTHER PTHR30487 1 252 7.4E-91 T 23-04-2016 CLI_RS04750 60323931f5f3b0b3b5b74315ca455cb3 110 Pfam PF12788 YmaF family 8 102 5.5E-41 T 23-04-2016 IPR024307 YmaF CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 Gene3D G3DSA:3.30.450.40 57 141 1.6E-5 T 23-04-2016 IPR029016 GAF domain-like CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 PANTHER PTHR32071 264 579 5.0E-158 T 23-04-2016 CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 359 374 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 Pfam PF02954 Bacterial regulatory protein, Fis family 539 580 7.2E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 8 118 6.5E-8 T 23-04-2016 CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 PANTHER PTHR32071:SF36 264 579 5.0E-158 T 23-04-2016 CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 Pfam PF00158 Sigma-54 interaction domain 272 439 4.7E-68 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 Gene3D G3DSA:3.40.50.300 269 445 6.1E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 Gene3D G3DSA:1.10.8.60 446 520 1.4E-18 T 23-04-2016 CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 296 309 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 SMART SM00382 292 436 1.4E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 Gene3D G3DSA:1.10.10.60 534 580 8.3E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 SUPERFAMILY SSF52540 271 516 6.07E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14390 ec03d5316f7aa655f9edad8dd6d48761 587 SUPERFAMILY SSF46689 486 580 5.68E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08495 058146f24bd026575a6b27363d1618d1 490 Gene3D G3DSA:1.10.287.950 101 306 1.1E-40 T 23-04-2016 CLI_RS08495 058146f24bd026575a6b27363d1618d1 490 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 159 332 6.0E-29 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS08495 058146f24bd026575a6b27363d1618d1 490 PANTHER PTHR32089 53 353 7.4E-47 T 23-04-2016 CLI_RS08495 058146f24bd026575a6b27363d1618d1 490 SUPERFAMILY SSF58104 91 347 5.49E-47 T 23-04-2016 CLI_RS08495 058146f24bd026575a6b27363d1618d1 490 Pfam PF13682 Chemoreceptor zinc-binding domain 379 439 2.0E-7 T 23-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 CLI_RS08495 058146f24bd026575a6b27363d1618d1 490 SMART SM00283 85 332 1.4E-24 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS04405 d71197e3f8b48f23ae2988d48bb1bf8a 373 Gene3D G3DSA:3.40.640.10 17 249 7.2E-78 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS04405 d71197e3f8b48f23ae2988d48bb1bf8a 373 Gene3D G3DSA:3.90.1150.10 252 372 5.9E-41 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS04405 d71197e3f8b48f23ae2988d48bb1bf8a 373 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 367 8.7E-115 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLI_RS04405 d71197e3f8b48f23ae2988d48bb1bf8a 373 SUPERFAMILY SSF53383 17 372 9.14E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS04405 d71197e3f8b48f23ae2988d48bb1bf8a 373 PANTHER PTHR30244:SF15 1 373 7.4E-196 T 23-04-2016 CLI_RS04405 d71197e3f8b48f23ae2988d48bb1bf8a 373 PIRSF PIRSF000390 2 373 7.1E-103 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLI_RS04405 d71197e3f8b48f23ae2988d48bb1bf8a 373 PANTHER PTHR30244 1 373 7.4E-196 T 23-04-2016 CLI_RS08060 a30dd52d494efa2b671f23c74d11b943 196 PANTHER PTHR23133:SF2 1 196 4.2E-101 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CLI_RS08060 a30dd52d494efa2b671f23c74d11b943 196 SUPERFAMILY SSF54211 6 88 3.04E-31 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS08060 a30dd52d494efa2b671f23c74d11b943 196 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 196 42.832 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CLI_RS08060 a30dd52d494efa2b671f23c74d11b943 196 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CLI_RS08060 a30dd52d494efa2b671f23c74d11b943 196 PANTHER PTHR23133 1 196 4.2E-101 T 23-04-2016 CLI_RS08060 a30dd52d494efa2b671f23c74d11b943 196 SUPERFAMILY SSF54211 89 181 1.11E-37 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS08060 a30dd52d494efa2b671f23c74d11b943 196 Gene3D G3DSA:3.30.230.40 5 91 1.3E-35 T 23-04-2016 CLI_RS08060 a30dd52d494efa2b671f23c74d11b943 196 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CLI_RS08060 a30dd52d494efa2b671f23c74d11b943 196 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 1.0E-66 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CLI_RS08060 a30dd52d494efa2b671f23c74d11b943 196 Gene3D G3DSA:3.30.230.40 92 196 9.3E-35 T 23-04-2016 CLI_RS15225 94927656140decd5353e5320dd82f01e 476 Pfam PF04055 Radical SAM superfamily 155 328 6.9E-21 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS15225 94927656140decd5353e5320dd82f01e 476 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 67 470 6.5E-170 T 23-04-2016 IPR023995 Coproporphyrinogen III oxidase KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00251 CLI_RS15225 94927656140decd5353e5320dd82f01e 476 SUPERFAMILY SSF102114 145 462 6.15E-72 T 23-04-2016 CLI_RS15225 94927656140decd5353e5320dd82f01e 476 PANTHER PTHR13932:SF1 92 471 8.4E-223 T 23-04-2016 CLI_RS15225 94927656140decd5353e5320dd82f01e 476 PANTHER PTHR13932 92 471 8.4E-223 T 23-04-2016 CLI_RS15225 94927656140decd5353e5320dd82f01e 476 SMART SM00729 148 375 3.6E-52 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS15225 94927656140decd5353e5320dd82f01e 476 Gene3D G3DSA:3.80.30.20 148 389 1.6E-38 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS07560 bfa100e8200cc84c77905ddd72191f34 150 PANTHER PTHR35798:SF1 1 149 4.6E-36 T 23-04-2016 CLI_RS07560 bfa100e8200cc84c77905ddd72191f34 150 Hamap MF_01197 Cell division protein SepF [sepF]. 3 139 17.802 T 23-04-2016 IPR023052 Cell division protein SepF GO:0090529 CLI_RS07560 bfa100e8200cc84c77905ddd72191f34 150 PANTHER PTHR35798 1 149 4.6E-36 T 23-04-2016 CLI_RS07560 bfa100e8200cc84c77905ddd72191f34 150 Pfam PF04472 Protein of unknown function (DUF552) 60 131 2.0E-24 T 23-04-2016 IPR007561 Cell division protein SepF/SepF-related GO:0000917 CLI_RS17705 94af592bf8a8ca782b752ca7dbfac59b 132 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 13 129 1.6E-58 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17705 94af592bf8a8ca782b752ca7dbfac59b 132 PANTHER PTHR11759 13 132 9.3E-69 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CLI_RS17705 94af592bf8a8ca782b752ca7dbfac59b 132 Pfam PF00411 Ribosomal protein S11 22 131 2.4E-49 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CLI_RS17705 94af592bf8a8ca782b752ca7dbfac59b 132 PIRSF PIRSF002131 2 132 9.7E-53 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CLI_RS17705 94af592bf8a8ca782b752ca7dbfac59b 132 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 6 132 34.082 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CLI_RS17705 94af592bf8a8ca782b752ca7dbfac59b 132 Gene3D G3DSA:3.30.420.80 10 132 6.8E-55 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CLI_RS17705 94af592bf8a8ca782b752ca7dbfac59b 132 ProSitePatterns PS00054 Ribosomal protein S11 signature. 100 122 - T 23-04-2016 IPR018102 Ribosomal S11, conserved site CLI_RS17705 94af592bf8a8ca782b752ca7dbfac59b 132 SUPERFAMILY SSF53137 17 132 3.66E-49 T 23-04-2016 CLI_RS12155 dd803bb6fd4a2f777032705b4723a731 258 SUPERFAMILY SSF46785 168 257 4.92E-41 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12155 dd803bb6fd4a2f777032705b4723a731 258 Gene3D G3DSA:1.10.10.10 197 241 1.1E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12155 dd803bb6fd4a2f777032705b4723a731 258 PIRSF PIRSF011572 1 258 8.1E-122 T 23-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 CLI_RS12155 dd803bb6fd4a2f777032705b4723a731 258 SUPERFAMILY SSF55781 27 162 5.89E-5 T 23-04-2016 IPR029016 GAF domain-like CLI_RS12155 dd803bb6fd4a2f777032705b4723a731 258 Pfam PF08222 CodY helix-turn-helix domain 198 258 2.8E-34 T 23-04-2016 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal CLI_RS12155 dd803bb6fd4a2f777032705b4723a731 258 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 258 141.079 T 23-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 CLI_RS12155 dd803bb6fd4a2f777032705b4723a731 258 Pfam PF06018 CodY GAF-like domain 3 179 2.7E-70 T 23-04-2016 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 CLI_RS12155 dd803bb6fd4a2f777032705b4723a731 258 PANTHER PTHR40062 2 258 5.0E-145 T 23-04-2016 CLI_RS12155 dd803bb6fd4a2f777032705b4723a731 258 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 4 254 3.2E-113 T 23-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 CLI_RS12180 4fe9f4460bc629b44e7a7d08250a3cd7 269 PANTHER PTHR10954:SF7 6 266 4.3E-137 T 23-04-2016 CLI_RS12180 4fe9f4460bc629b44e7a7d08250a3cd7 269 PANTHER PTHR10954 6 266 4.3E-137 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 CLI_RS12180 4fe9f4460bc629b44e7a7d08250a3cd7 269 Hamap MF_00052_B Ribonuclease HII [rnhB]. 84 267 34.098 T 23-04-2016 IPR022898 Ribonuclease HII GO:0004523 CLI_RS12180 4fe9f4460bc629b44e7a7d08250a3cd7 269 Pfam PF01351 Ribonuclease HII 86 266 2.2E-38 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain CLI_RS12180 4fe9f4460bc629b44e7a7d08250a3cd7 269 Gene3D G3DSA:3.30.420.10 84 228 1.5E-43 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS12180 4fe9f4460bc629b44e7a7d08250a3cd7 269 SUPERFAMILY SSF53098 74 265 1.38E-59 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS07765 29ac7611d55c7bb4a325f2c18ce0f010 232 PANTHER PTHR24220:SF577 4 232 3.4E-127 T 23-04-2016 CLI_RS07765 29ac7611d55c7bb4a325f2c18ce0f010 232 SMART SM00382 31 214 4.0E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS07765 29ac7611d55c7bb4a325f2c18ce0f010 232 Pfam PF00005 ABC transporter 22 165 1.9E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS07765 29ac7611d55c7bb4a325f2c18ce0f010 232 PANTHER PTHR24220 4 232 3.4E-127 T 23-04-2016 CLI_RS07765 29ac7611d55c7bb4a325f2c18ce0f010 232 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07765 29ac7611d55c7bb4a325f2c18ce0f010 232 Gene3D G3DSA:3.40.50.300 2 224 6.3E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07765 29ac7611d55c7bb4a325f2c18ce0f010 232 SUPERFAMILY SSF52540 3 223 2.86E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15830 28cca5b04214a0c7ac16eda0676746dc 218 Gene3D G3DSA:3.40.50.300 1 217 2.9E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15830 28cca5b04214a0c7ac16eda0676746dc 218 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS15830 28cca5b04214a0c7ac16eda0676746dc 218 SMART SM00382 30 216 1.6E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS15830 28cca5b04214a0c7ac16eda0676746dc 218 SUPERFAMILY SSF52540 1 217 6.01E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15830 28cca5b04214a0c7ac16eda0676746dc 218 PANTHER PTHR24220 3 217 5.6E-98 T 23-04-2016 CLI_RS15830 28cca5b04214a0c7ac16eda0676746dc 218 Pfam PF00005 ABC transporter 21 167 5.0E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS15830 28cca5b04214a0c7ac16eda0676746dc 218 PANTHER PTHR24220:SF86 3 217 5.6E-98 T 23-04-2016 CLI_RS11820 3529011f14b46de25d9c4f1ae4edae77 469 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 319 460 1.1E-33 T 23-04-2016 IPR006517 Archaeophage PsiM2, terminase large subunit CLI_RS11820 3529011f14b46de25d9c4f1ae4edae77 469 Pfam PF03237 Terminase-like family 59 454 3.8E-15 T 23-04-2016 IPR004921 Terminase, large subunit CLI_RS03020 447b2b6e554e9f571b0e3fbcf3e9e5d2 231 Gene3D G3DSA:3.40.50.300 2 220 3.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03020 447b2b6e554e9f571b0e3fbcf3e9e5d2 231 PANTHER PTHR24220 6 227 1.0E-111 T 23-04-2016 CLI_RS03020 447b2b6e554e9f571b0e3fbcf3e9e5d2 231 Pfam PF00005 ABC transporter 20 155 1.7E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03020 447b2b6e554e9f571b0e3fbcf3e9e5d2 231 SMART SM00382 29 204 1.8E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03020 447b2b6e554e9f571b0e3fbcf3e9e5d2 231 SUPERFAMILY SSF52540 4 215 8.74E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03020 447b2b6e554e9f571b0e3fbcf3e9e5d2 231 PANTHER PTHR24220:SF530 6 227 1.0E-111 T 23-04-2016 CLI_RS16490 b20293e9caa1770b749c9767408d780c 146 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 2 90 5.5E-29 T 23-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CLI_RS16490 b20293e9caa1770b749c9767408d780c 146 PANTHER PTHR35805 1 146 1.8E-70 T 23-04-2016 CLI_RS16490 b20293e9caa1770b749c9767408d780c 146 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 95 142 7.1E-16 T 23-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CLI_RS16490 b20293e9caa1770b749c9767408d780c 146 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 1 145 27.525 T 23-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CLI_RS16490 b20293e9caa1770b749c9767408d780c 146 Gene3D G3DSA:3.30.70.140 4 93 9.7E-31 T 23-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CLI_RS16490 b20293e9caa1770b749c9767408d780c 146 SUPERFAMILY SSF54893 1 93 8.89E-32 T 23-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CLI_RS16490 b20293e9caa1770b749c9767408d780c 146 SUPERFAMILY SSF57825 95 143 7.72E-16 T 23-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CLI_RS16490 b20293e9caa1770b749c9767408d780c 146 PANTHER PTHR35805:SF1 1 146 1.8E-70 T 23-04-2016 CLI_RS16490 b20293e9caa1770b749c9767408d780c 146 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 4 92 1.0E-26 T 23-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CLI_RS16490 b20293e9caa1770b749c9767408d780c 146 Gene3D G3DSA:2.30.30.20 94 143 1.6E-19 T 23-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CLI_RS06930 f62871500bb4cf8fa6897ac051694178 628 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 10 627 2.5E-253 T 23-04-2016 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.99.2|KEGG: 00680+1.2.99.2|KEGG: 00720+1.2.99.2|MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLI_RS06930 f62871500bb4cf8fa6897ac051694178 628 Pfam PF03063 Prismane/CO dehydrogenase family 47 608 5.3E-144 T 23-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS06930 f62871500bb4cf8fa6897ac051694178 628 Gene3D G3DSA:3.40.50.2030 234 404 7.4E-59 T 23-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS06930 f62871500bb4cf8fa6897ac051694178 628 PANTHER PTHR30109:SF4 3 628 5.4E-280 T 23-04-2016 CLI_RS06930 f62871500bb4cf8fa6897ac051694178 628 PIRSF PIRSF005023 1 628 2.3E-234 T 23-04-2016 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.99.2|KEGG: 00680+1.2.99.2|KEGG: 00720+1.2.99.2|MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLI_RS06930 f62871500bb4cf8fa6897ac051694178 628 SUPERFAMILY SSF56821 20 627 9.92E-155 T 23-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLI_RS06930 f62871500bb4cf8fa6897ac051694178 628 Gene3D G3DSA:1.20.1270.30 61 232 1.3E-62 T 23-04-2016 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.99.2|KEGG: 00680+1.2.99.2|KEGG: 00720+1.2.99.2|MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLI_RS06930 f62871500bb4cf8fa6897ac051694178 628 PANTHER PTHR30109 3 628 5.4E-280 T 23-04-2016 CLI_RS06930 f62871500bb4cf8fa6897ac051694178 628 Gene3D G3DSA:3.40.50.2030 409 627 1.4E-76 T 23-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS03415 a52674cd8b5365542de59dc74a9d601e 103 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 43 95 5.3E-6 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CLI_RS03415 a52674cd8b5365542de59dc74a9d601e 103 Gene3D G3DSA:1.10.340.30 39 95 2.8E-8 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CLI_RS03415 a52674cd8b5365542de59dc74a9d601e 103 SUPERFAMILY SSF48150 36 95 1.96E-8 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CLI_RS04895 2f7777f3a961eaa83c7f3c060c748ebc 194 Pfam PF12464 Maltose acetyltransferase 6 55 2.2E-14 T 23-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CLI_RS04895 2f7777f3a961eaa83c7f3c060c748ebc 194 SMART SM01266 4 58 5.0E-20 T 23-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CLI_RS04895 2f7777f3a961eaa83c7f3c060c748ebc 194 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 148 176 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CLI_RS04895 2f7777f3a961eaa83c7f3c060c748ebc 194 PANTHER PTHR23416 1 194 7.4E-71 T 23-04-2016 CLI_RS04895 2f7777f3a961eaa83c7f3c060c748ebc 194 Gene3D G3DSA:2.160.10.10 2 193 2.7E-59 T 23-04-2016 CLI_RS04895 2f7777f3a961eaa83c7f3c060c748ebc 194 PANTHER PTHR23416:SF58 1 194 7.4E-71 T 23-04-2016 CLI_RS04895 2f7777f3a961eaa83c7f3c060c748ebc 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 174 1.1E-11 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS04895 2f7777f3a961eaa83c7f3c060c748ebc 194 SUPERFAMILY SSF51161 2 193 4.71E-50 T 23-04-2016 IPR011004 Trimeric LpxA-like CLI_RS17580 4f2e37d1eb5bfaba5190b992d1667e98 532 SUPERFAMILY SSF51905 95 291 1.03E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS17580 4f2e37d1eb5bfaba5190b992d1667e98 532 SUPERFAMILY SSF51905 468 525 1.03E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS17580 4f2e37d1eb5bfaba5190b992d1667e98 532 PANTHER PTHR10617:SF52 467 526 5.6E-161 T 23-04-2016 CLI_RS17580 4f2e37d1eb5bfaba5190b992d1667e98 532 PANTHER PTHR10617:SF52 71 385 5.6E-161 T 23-04-2016 CLI_RS17580 4f2e37d1eb5bfaba5190b992d1667e98 532 PIRSF PIRSF038984 1 532 4.6E-243 T 23-04-2016 IPR028348 FAD dependent protein CLI_RS17580 4f2e37d1eb5bfaba5190b992d1667e98 532 PANTHER PTHR10617 467 526 5.6E-161 T 23-04-2016 CLI_RS17580 4f2e37d1eb5bfaba5190b992d1667e98 532 PANTHER PTHR10617 71 385 5.6E-161 T 23-04-2016 CLI_RS17580 4f2e37d1eb5bfaba5190b992d1667e98 532 Gene3D G3DSA:3.50.50.60 460 526 9.7E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS17580 4f2e37d1eb5bfaba5190b992d1667e98 532 Gene3D G3DSA:3.50.50.60 99 284 9.7E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS16480 29b8660bcc966b705c2e16b944b74320 283 PANTHER PTHR19278 2 23 1.2E-74 T 23-04-2016 CLI_RS16480 29b8660bcc966b705c2e16b944b74320 283 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 257 2.7E-30 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16480 29b8660bcc966b705c2e16b944b74320 283 PANTHER PTHR19278:SF1 42 236 1.2E-74 T 23-04-2016 CLI_RS16480 29b8660bcc966b705c2e16b944b74320 283 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 4 259 5.8E-72 T 23-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16480 29b8660bcc966b705c2e16b944b74320 283 Gene3D G3DSA:3.20.20.70 8 263 8.5E-60 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS16480 29b8660bcc966b705c2e16b944b74320 283 SMART SM00934 15 264 6.6E-44 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16480 29b8660bcc966b705c2e16b944b74320 283 PANTHER PTHR19278 42 236 1.2E-74 T 23-04-2016 CLI_RS16480 29b8660bcc966b705c2e16b944b74320 283 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 1 282 37.888 T 23-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16480 29b8660bcc966b705c2e16b944b74320 283 SUPERFAMILY SSF51366 3 260 1.55E-70 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLI_RS16480 29b8660bcc966b705c2e16b944b74320 283 PANTHER PTHR19278:SF1 2 23 1.2E-74 T 23-04-2016 CLI_RS13555 2e189df92c15dc271699335307b72ff7 384 SUPERFAMILY SSF53756 1 378 4.92E-87 T 23-04-2016 CLI_RS13555 2e189df92c15dc271699335307b72ff7 384 Gene3D G3DSA:3.40.50.2000 218 371 5.9E-13 T 23-04-2016 CLI_RS13555 2e189df92c15dc271699335307b72ff7 384 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 3 369 1.5E-137 T 23-04-2016 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 CLI_RS13555 2e189df92c15dc271699335307b72ff7 384 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 370 6.0E-85 T 23-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CLI_RS13555 2e189df92c15dc271699335307b72ff7 384 Gene3D G3DSA:3.40.50.2000 1 210 6.3E-45 T 23-04-2016 CLI_RS04930 2b677019db770180564c410ac330f1d6 173 PANTHER PTHR23026 1 172 2.0E-82 T 23-04-2016 CLI_RS04930 2b677019db770180564c410ac330f1d6 173 SUPERFAMILY SSF55469 2 168 3.66E-37 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS04930 2b677019db770180564c410ac330f1d6 173 Gene3D G3DSA:3.40.109.10 1 172 2.9E-43 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS04930 2b677019db770180564c410ac330f1d6 173 Pfam PF00881 Nitroreductase family 5 58 2.5E-11 T 23-04-2016 IPR029479 Nitroreductase CLI_RS04930 2b677019db770180564c410ac330f1d6 173 Pfam PF00881 Nitroreductase family 66 149 1.9E-7 T 23-04-2016 IPR029479 Nitroreductase CLI_RS04930 2b677019db770180564c410ac330f1d6 173 PANTHER PTHR23026:SF117 1 172 2.0E-82 T 23-04-2016 CLI_RS15825 f89f0d1bf6a50286e354c6bcaf4d5207 598 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS15825 f89f0d1bf6a50286e354c6bcaf4d5207 598 PANTHER PTHR24221:SF138 30 591 2.3E-121 T 23-04-2016 CLI_RS15825 f89f0d1bf6a50286e354c6bcaf4d5207 598 SMART SM00382 392 577 2.5E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS15825 f89f0d1bf6a50286e354c6bcaf4d5207 598 SUPERFAMILY SSF90123 32 350 4.05E-47 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS15825 f89f0d1bf6a50286e354c6bcaf4d5207 598 SUPERFAMILY SSF52540 365 591 5.45E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15825 f89f0d1bf6a50286e354c6bcaf4d5207 598 Gene3D G3DSA:3.40.50.300 368 590 6.9E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15825 f89f0d1bf6a50286e354c6bcaf4d5207 598 PANTHER PTHR24221 30 591 2.3E-121 T 23-04-2016 CLI_RS15825 f89f0d1bf6a50286e354c6bcaf4d5207 598 Gene3D G3DSA:1.20.1560.10 37 348 1.5E-44 T 23-04-2016 CLI_RS15825 f89f0d1bf6a50286e354c6bcaf4d5207 598 Pfam PF00664 ABC transporter transmembrane region 51 315 2.6E-20 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS15825 f89f0d1bf6a50286e354c6bcaf4d5207 598 Pfam PF00005 ABC transporter 383 530 4.2E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 Gene3D G3DSA:3.50.50.60 224 283 3.0E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 Gene3D G3DSA:3.50.50.60 3 116 3.0E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 SUPERFAMILY SSF51905 3 284 2.3E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 Gene3D G3DSA:3.50.50.60 118 217 4.0E-13 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 PANTHER PTHR22912:SF48 1 285 1.5E-90 T 23-04-2016 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 258 3.3E-16 T 23-04-2016 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.3E-16 T 23-04-2016 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 3.3E-16 T 23-04-2016 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 3.3E-16 T 23-04-2016 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 3.9E-27 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 59 69 3.9E-27 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 3.9E-27 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 264 3.9E-27 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 3.9E-27 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 125 137 3.9E-27 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 PANTHER PTHR22912 1 285 1.5E-90 T 23-04-2016 CLI_RS17600 29ea59b15cca10cef22f0d0efaf1d949 287 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 268 2.9E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS03715 bf2fd44b69a3461ee389dd6d736ad83b 121 Gene3D G3DSA:1.10.10.60 60 110 1.2E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03715 bf2fd44b69a3461ee389dd6d736ad83b 121 SUPERFAMILY SSF46689 6 56 4.21E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03715 bf2fd44b69a3461ee389dd6d736ad83b 121 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 102 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLI_RS03715 bf2fd44b69a3461ee389dd6d736ad83b 121 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 3.0E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS03715 bf2fd44b69a3461ee389dd6d736ad83b 121 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 3.0E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS03715 bf2fd44b69a3461ee389dd6d736ad83b 121 Gene3D G3DSA:1.10.10.60 3 59 2.5E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03715 bf2fd44b69a3461ee389dd6d736ad83b 121 SUPERFAMILY SSF46689 59 109 3.0E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03715 bf2fd44b69a3461ee389dd6d736ad83b 121 Pfam PF12833 Helix-turn-helix domain 28 107 6.0E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS03715 bf2fd44b69a3461ee389dd6d736ad83b 121 SMART SM00342 22 106 2.3E-27 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS03715 bf2fd44b69a3461ee389dd6d736ad83b 121 PANTHER PTHR11019 6 114 1.2E-31 T 23-04-2016 CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 PANTHER PTHR11615:SF106 245 518 3.6E-99 T 23-04-2016 CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 PANTHER PTHR11615:SF106 1 195 3.6E-99 T 23-04-2016 CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 SUPERFAMILY SSF54862 5 75 4.95E-19 T 23-04-2016 CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 Gene3D G3DSA:3.40.50.1780 136 247 8.0E-40 T 23-04-2016 CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 Gene3D G3DSA:3.40.50.1780 30 97 8.0E-40 T 23-04-2016 CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 PANTHER PTHR11615 245 518 3.6E-99 T 23-04-2016 CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 PANTHER PTHR11615 1 195 3.6E-99 T 23-04-2016 CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 SUPERFAMILY SSF53920 39 327 1.7E-62 T 23-04-2016 IPR009016 Iron hydrogenase CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 SUPERFAMILY SSF55785 423 518 8.95E-6 T 23-04-2016 IPR000014 PAS domain CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 Pfam PF00037 4Fe-4S binding domain 34 55 1.5E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 Gene3D G3DSA:3.30.70.20 6 29 5.0E-4 T 23-04-2016 CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 Gene3D G3DSA:3.30.450.20 415 517 2.2E-8 T 23-04-2016 CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 Pfam PF04060 Putative Fe-S cluster 381 409 4.9E-7 T 23-04-2016 IPR007202 4Fe-4S domain GO:0051536 CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 72 299 2.1E-51 T 23-04-2016 IPR004108 Iron hydrogenase, large subunit, C-terminal CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 11 22 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS08935 54eb88faa722ee14753db6a0c9586a23 579 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 423 522 1.4E-7 T 23-04-2016 IPR000014 PAS domain CLI_RS06935 02667994d5029a0ae2fd2d071f030cc6 147 Pfam PF13247 4Fe-4S dicluster domain 57 145 8.4E-21 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS06935 02667994d5029a0ae2fd2d071f030cc6 147 Gene3D G3DSA:3.30.70.20 66 103 9.8E-14 T 23-04-2016 CLI_RS06935 02667994d5029a0ae2fd2d071f030cc6 147 PANTHER PTHR11938 1 144 2.3E-25 T 23-04-2016 CLI_RS06935 02667994d5029a0ae2fd2d071f030cc6 147 Gene3D G3DSA:3.30.70.20 104 146 9.1E-12 T 23-04-2016 CLI_RS06935 02667994d5029a0ae2fd2d071f030cc6 147 SUPERFAMILY SSF54862 4 143 4.87E-36 T 23-04-2016 CLI_RS06935 02667994d5029a0ae2fd2d071f030cc6 147 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 94 105 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS06935 02667994d5029a0ae2fd2d071f030cc6 147 Gene3D G3DSA:3.30.70.20 4 65 3.3E-15 T 23-04-2016 CLI_RS10450 9173c3a46c30cedcf8aab857e793475a 493 SUPERFAMILY SSF55874 27 166 1.83E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS10450 9173c3a46c30cedcf8aab857e793475a 493 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 144 1.4E-30 T 23-04-2016 CLI_RS10450 9173c3a46c30cedcf8aab857e793475a 493 Gene3D G3DSA:3.30.565.10 18 216 1.7E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS07600 704e6cca7eebeda2c91133f13ccb0769 207 SUPERFAMILY SSF109635 1 88 5.89E-15 T 23-04-2016 CLI_RS07600 704e6cca7eebeda2c91133f13ccb0769 207 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 87 119 7.7E-12 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CLI_RS07600 704e6cca7eebeda2c91133f13ccb0769 207 SUPERFAMILY SSF57716 89 123 8.69E-10 T 23-04-2016 CLI_RS07600 704e6cca7eebeda2c91133f13ccb0769 207 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 6 165 9.2E-59 T 23-04-2016 IPR014240 Regulatory protein, YteA family CLI_RS07600 704e6cca7eebeda2c91133f13ccb0769 207 PANTHER PTHR33823 1 147 1.1E-76 T 23-04-2016 CLI_RS07600 704e6cca7eebeda2c91133f13ccb0769 207 PANTHER PTHR33823:SF2 1 147 1.1E-76 T 23-04-2016 CLI_RS16890 31b23278536fac597cc863832205507d 244 Pfam PF09335 SNARE associated Golgi protein 84 202 2.1E-28 T 23-04-2016 IPR032816 SNARE associated Golgi protein CLI_RS16890 31b23278536fac597cc863832205507d 244 PANTHER PTHR12677:SF26 3 241 2.5E-105 T 23-04-2016 CLI_RS16890 31b23278536fac597cc863832205507d 244 PANTHER PTHR12677 3 241 2.5E-105 T 23-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 CLI_RS09285 2fe2441886a5186ad7eb1523d4a63699 122 Pfam PF05521 Phage head-tail joining protein 9 118 2.7E-25 T 23-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor CLI_RS09285 2fe2441886a5186ad7eb1523d4a63699 122 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 8 97 4.5E-15 T 23-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor CLI_RS05840 2004d82698594c3fcccd9837d3678426 198 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 36 192 5.0E-29 T 23-04-2016 IPR005642 Lysine exporter LysO CLI_RS05840 2004d82698594c3fcccd9837d3678426 198 Pfam PF03956 Membrane protein of unknown function (DUF340) 7 195 4.0E-63 T 23-04-2016 IPR005642 Lysine exporter LysO CLI_RS05840 2004d82698594c3fcccd9837d3678426 198 PANTHER PTHR35804:SF1 2 198 3.2E-81 T 23-04-2016 CLI_RS05840 2004d82698594c3fcccd9837d3678426 198 PANTHER PTHR35804 2 198 3.2E-81 T 23-04-2016 CLI_RS15880 5cec11fe2c516d981e42fa863a342c6b 133 SUPERFAMILY SSF53041 1 113 7.06E-16 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS15880 5cec11fe2c516d981e42fa863a342c6b 133 Gene3D G3DSA:3.40.50.1390 1 120 5.1E-16 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS15880 5cec11fe2c516d981e42fa863a342c6b 133 SMART SM00857 2 127 2.0E-9 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS15880 5cec11fe2c516d981e42fa863a342c6b 133 Pfam PF00239 Resolvase, N terminal domain 2 121 1.9E-12 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS15755 43d8391a6b2c61fd448b8baf1551e0f4 232 SUPERFAMILY SSF50249 8 204 2.57E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15755 43d8391a6b2c61fd448b8baf1551e0f4 232 Gene3D G3DSA:2.40.50.140 102 216 1.7E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15755 43d8391a6b2c61fd448b8baf1551e0f4 232 Gene3D G3DSA:2.40.50.140 5 98 2.6E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15755 43d8391a6b2c61fd448b8baf1551e0f4 232 Pfam PF00436 Single-strand binding protein family 107 195 7.5E-16 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 CLI_RS15755 43d8391a6b2c61fd448b8baf1551e0f4 232 Pfam PF00436 Single-strand binding protein family 8 97 5.5E-5 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 CLI_RS01670 dc365ff4b3dca98540e3192c710b48a6 157 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 73 85 - T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS01670 dc365ff4b3dca98540e3192c710b48a6 157 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 10 131 2.7E-41 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS01670 dc365ff4b3dca98540e3192c710b48a6 157 PANTHER PTHR30175 1 106 4.0E-39 T 23-04-2016 CLI_RS01670 dc365ff4b3dca98540e3192c710b48a6 157 Gene3D G3DSA:2.70.70.10 6 151 3.5E-52 T 23-04-2016 CLI_RS01670 dc365ff4b3dca98540e3192c710b48a6 157 SUPERFAMILY SSF51261 3 147 2.44E-49 T 23-04-2016 IPR011055 Duplicated hybrid motif CLI_RS01670 dc365ff4b3dca98540e3192c710b48a6 157 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 9 131 3.2E-46 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 Gene3D G3DSA:3.40.1440.10 14 93 4.6E-12 T 23-04-2016 IPR027299 GIY-YIG domain CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 PANTHER PTHR30562:SF1 4 459 8.5E-264 T 23-04-2016 CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 5 598 2.5E-178 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 Gene3D G3DSA:1.10.150.20 564 618 1.5E-17 T 23-04-2016 CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 SMART SM00465 14 96 3.5E-27 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 Gene3D G3DSA:4.10.860.10 183 244 8.4E-15 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 PANTHER PTHR30562:SF1 476 617 8.5E-264 T 23-04-2016 CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 Pfam PF02151 UvrB/uvrC motif 214 238 1.2E-5 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 PANTHER PTHR30562 4 459 8.5E-264 T 23-04-2016 CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 PANTHER PTHR30562 476 617 8.5E-264 T 23-04-2016 CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 Pfam PF12826 Helix-hairpin-helix motif 570 618 8.9E-10 T 23-04-2016 CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 SUPERFAMILY SSF46600 190 243 2.09E-11 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 Pfam PF01541 GIY-YIG catalytic domain 15 91 1.7E-11 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 616 28.228 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 SUPERFAMILY SSF82771 13 98 3.66E-25 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 SUPERFAMILY SSF47781 530 618 5.72E-19 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CLI_RS17340 e51d4183ab6faa252c2d3bb1f77644f9 618 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 386 551 3.4E-50 T 23-04-2016 IPR001162 UvrC family homology region CLI_RS17700 930462988ff043124525fbefbbc5226f 206 SUPERFAMILY SSF55174 3 206 4.32E-72 T 23-04-2016 CLI_RS17700 930462988ff043124525fbefbbc5226f 206 Gene3D G3DSA:1.10.1050.10 1 99 3.0E-44 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CLI_RS17700 930462988ff043124525fbefbbc5226f 206 SMART SM01390 3 97 2.2E-56 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CLI_RS17700 930462988ff043124525fbefbbc5226f 206 Pfam PF01479 S4 domain 98 145 1.9E-21 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS17700 930462988ff043124525fbefbbc5226f 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 23-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 CLI_RS17700 930462988ff043124525fbefbbc5226f 206 PANTHER PTHR11831:SF4 1 206 3.2E-89 T 23-04-2016 CLI_RS17700 930462988ff043124525fbefbbc5226f 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 5.0E-74 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLI_RS17700 930462988ff043124525fbefbbc5226f 206 SMART SM00363 98 160 2.2E-20 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS17700 930462988ff043124525fbefbbc5226f 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.3 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLI_RS17700 930462988ff043124525fbefbbc5226f 206 PANTHER PTHR11831 1 206 3.2E-89 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 CLI_RS17700 930462988ff043124525fbefbbc5226f 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 1.9E-29 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CLI_RS17700 930462988ff043124525fbefbbc5226f 206 Gene3D G3DSA:3.10.290.10 100 197 1.4E-29 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS01430 6d1488004d3cc9b1c1cef7ab6d8ac037 488 SUPERFAMILY SSF49503 73 182 1.44E-21 T 23-04-2016 IPR008972 Cupredoxin CLI_RS01430 6d1488004d3cc9b1c1cef7ab6d8ac037 488 SUPERFAMILY SSF49503 229 385 1.57E-13 T 23-04-2016 IPR008972 Cupredoxin CLI_RS01430 6d1488004d3cc9b1c1cef7ab6d8ac037 488 Pfam PF07731 Multicopper oxidase 52 182 5.5E-9 T 23-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CLI_RS01430 6d1488004d3cc9b1c1cef7ab6d8ac037 488 Gene3D G3DSA:2.60.40.420 455 470 1.3E-16 T 23-04-2016 IPR008972 Cupredoxin CLI_RS01430 6d1488004d3cc9b1c1cef7ab6d8ac037 488 Gene3D G3DSA:2.60.40.420 241 387 1.3E-16 T 23-04-2016 IPR008972 Cupredoxin CLI_RS01430 6d1488004d3cc9b1c1cef7ab6d8ac037 488 Gene3D G3DSA:2.60.40.420 67 180 6.9E-19 T 23-04-2016 IPR008972 Cupredoxin CLI_RS13975 c92239988c86ccc68fd876eb1a1ced24 686 Gene3D G3DSA:1.10.287.950 425 643 3.0E-43 T 23-04-2016 CLI_RS13975 c92239988c86ccc68fd876eb1a1ced24 686 Gene3D G3DSA:3.30.450.20 164 303 1.4E-30 T 23-04-2016 CLI_RS13975 c92239988c86ccc68fd876eb1a1ced24 686 Pfam PF00672 HAMP domain 307 377 1.3E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS13975 c92239988c86ccc68fd876eb1a1ced24 686 PANTHER PTHR32089 6 686 0.0 T 23-04-2016 CLI_RS13975 c92239988c86ccc68fd876eb1a1ced24 686 PANTHER PTHR32089:SF36 6 686 0.0 T 23-04-2016 CLI_RS13975 c92239988c86ccc68fd876eb1a1ced24 686 SMART SM00283 410 685 3.9E-54 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS13975 c92239988c86ccc68fd876eb1a1ced24 686 SMART SM00304 326 381 1.3E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS13975 c92239988c86ccc68fd876eb1a1ced24 686 SUPERFAMILY SSF58104 416 685 2.62E-60 T 23-04-2016 CLI_RS13975 c92239988c86ccc68fd876eb1a1ced24 686 SUPERFAMILY SSF58104 356 383 2.62E-60 T 23-04-2016 CLI_RS13975 c92239988c86ccc68fd876eb1a1ced24 686 SUPERFAMILY SSF103190 121 207 2.16E-10 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS13975 c92239988c86ccc68fd876eb1a1ced24 686 Pfam PF02743 Cache domain 48 289 1.6E-35 T 23-04-2016 IPR033479 Double Cache domain 1 CLI_RS13975 c92239988c86ccc68fd876eb1a1ced24 686 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 666 2.9E-39 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 SUPERFAMILY SSF100950 75 233 3.93E-33 T 23-04-2016 CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 4.8E-52 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 1.2E-16 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.9E-9 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.9E-9 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 PANTHER PTHR30363 1 252 2.8E-111 T 23-04-2016 CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 Gene3D G3DSA:3.40.50.1360 78 215 1.6E-13 T 23-04-2016 CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 PANTHER PTHR30363:SF4 1 252 2.8E-111 T 23-04-2016 CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 SUPERFAMILY SSF46785 5 78 2.84E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 SMART SM01134 73 233 7.6E-67 T 23-04-2016 CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 SMART SM00420 6 58 7.7E-17 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 Gene3D G3DSA:1.10.10.10 4 55 3.2E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11055 a59d5d0c3090639e837cafe2fc11f59e 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLI_RS09600 f4e552335e8604ac18c07cad523dddc5 152 Pfam PF01220 Dehydroquinase class II 3 139 1.4E-55 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CLI_RS09600 f4e552335e8604ac18c07cad523dddc5 152 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 152 58.809 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CLI_RS09600 f4e552335e8604ac18c07cad523dddc5 152 PANTHER PTHR21272 1 149 7.4E-85 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CLI_RS09600 f4e552335e8604ac18c07cad523dddc5 152 PIRSF PIRSF001399 1 146 4.8E-64 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CLI_RS09600 f4e552335e8604ac18c07cad523dddc5 152 SUPERFAMILY SSF52304 3 144 2.62E-57 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CLI_RS09600 f4e552335e8604ac18c07cad523dddc5 152 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 140 3.0E-45 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CLI_RS09600 f4e552335e8604ac18c07cad523dddc5 152 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 23-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CLI_RS09600 f4e552335e8604ac18c07cad523dddc5 152 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 142 3.4E-59 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CLI_RS09600 f4e552335e8604ac18c07cad523dddc5 152 Gene3D G3DSA:3.40.50.9100 3 145 2.2E-60 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CLI_RS07545 731b4c6f0c573d75e4e1ec753c1b3245 116 Pfam PF06947 Protein of unknown function (DUF1290) 21 106 3.3E-38 T 23-04-2016 IPR009709 Protein of unknown function DUF1290 CLI_RS07545 731b4c6f0c573d75e4e1ec753c1b3245 116 PIRSF PIRSF018579 1 112 4.8E-47 T 23-04-2016 IPR009709 Protein of unknown function DUF1290 CLI_RS14490 7579358c6254f0bd86a142a6b2ed1d74 441 Pfam PF03471 Transporter associated domain 362 439 1.1E-21 T 23-04-2016 IPR005170 Transporter-associated domain CLI_RS14490 7579358c6254f0bd86a142a6b2ed1d74 441 PANTHER PTHR22777 1 441 8.9E-200 T 23-04-2016 CLI_RS14490 7579358c6254f0bd86a142a6b2ed1d74 441 PANTHER PTHR22777:SF8 1 441 8.9E-200 T 23-04-2016 CLI_RS14490 7579358c6254f0bd86a142a6b2ed1d74 441 Pfam PF01595 Domain of unknown function DUF21 10 209 2.0E-46 T 23-04-2016 IPR002550 Domain of unknown function DUF21 CLI_RS14490 7579358c6254f0bd86a142a6b2ed1d74 441 Pfam PF00571 CBS domain 225 281 3.5E-7 T 23-04-2016 IPR000644 CBS domain CLI_RS14490 7579358c6254f0bd86a142a6b2ed1d74 441 Gene3D G3DSA:3.30.465.10 353 439 2.7E-25 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLI_RS14490 7579358c6254f0bd86a142a6b2ed1d74 441 SUPERFAMILY SSF56176 359 439 1.28E-20 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLI_RS14490 7579358c6254f0bd86a142a6b2ed1d74 441 SMART SM00116 233 282 0.0012 T 23-04-2016 IPR000644 CBS domain CLI_RS14490 7579358c6254f0bd86a142a6b2ed1d74 441 Gene3D G3DSA:3.10.580.10 209 352 6.3E-23 T 23-04-2016 CLI_RS14490 7579358c6254f0bd86a142a6b2ed1d74 441 SMART SM01091 361 441 2.0E-23 T 23-04-2016 IPR005170 Transporter-associated domain CLI_RS14490 7579358c6254f0bd86a142a6b2ed1d74 441 SUPERFAMILY SSF54631 219 356 8.66E-30 T 23-04-2016 CLI_RS16125 77629ecb9589d73312492b38596929ea 545 PANTHER PTHR30461:SF3 1 486 1.0E-72 T 23-04-2016 CLI_RS16125 77629ecb9589d73312492b38596929ea 545 Pfam PF13408 Recombinase zinc beta ribbon domain 324 385 1.6E-11 T 23-04-2016 IPR025827 Recombinase zinc beta ribbon domain CLI_RS16125 77629ecb9589d73312492b38596929ea 545 SUPERFAMILY SSF53041 1 151 2.75E-39 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS16125 77629ecb9589d73312492b38596929ea 545 PANTHER PTHR30461 1 486 1.0E-72 T 23-04-2016 CLI_RS16125 77629ecb9589d73312492b38596929ea 545 SMART SM00857 3 151 8.2E-61 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS16125 77629ecb9589d73312492b38596929ea 545 Pfam PF07508 Recombinase 185 309 1.2E-23 T 23-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CLI_RS16125 77629ecb9589d73312492b38596929ea 545 Gene3D G3DSA:3.40.50.1390 2 134 8.8E-34 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS16125 77629ecb9589d73312492b38596929ea 545 Pfam PF00239 Resolvase, N terminal domain 3 151 3.3E-40 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS18275 a0f2a9111f3545291c98dbdff7b60072 271 Gene3D G3DSA:3.40.50.2020 84 263 3.2E-47 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS18275 a0f2a9111f3545291c98dbdff7b60072 271 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 4 263 5.0E-109 T 23-04-2016 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 CLI_RS18275 a0f2a9111f3545291c98dbdff7b60072 271 PANTHER PTHR11776:SF9 49 265 9.9E-110 T 23-04-2016 CLI_RS18275 a0f2a9111f3545291c98dbdff7b60072 271 SUPERFAMILY SSF53271 93 254 2.98E-35 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS18275 a0f2a9111f3545291c98dbdff7b60072 271 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 15 73 7.0E-21 T 23-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 CLI_RS18275 a0f2a9111f3545291c98dbdff7b60072 271 SUPERFAMILY SSF46785 3 73 2.04E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18275 a0f2a9111f3545291c98dbdff7b60072 271 Pfam PF00156 Phosphoribosyl transferase domain 112 261 4.6E-21 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS18275 a0f2a9111f3545291c98dbdff7b60072 271 Gene3D G3DSA:1.10.10.10 3 73 1.1E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18275 a0f2a9111f3545291c98dbdff7b60072 271 Pfam PF09182 Bacterial purine repressor, N-terminal 6 73 3.6E-29 T 23-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 CLI_RS18275 a0f2a9111f3545291c98dbdff7b60072 271 PANTHER PTHR11776 49 265 9.9E-110 T 23-04-2016 CLI_RS15270 701b82b22ddb16b5e2b9a82b8009563f 45 TIGRFAM TIGR03973 six_Cys_in_45: six-cysteine peptide SCIFF 2 44 2.1E-23 T 23-04-2016 IPR023975 Six-cysteine peptide SCIFF CLI_RS15270 701b82b22ddb16b5e2b9a82b8009563f 45 Pfam PF13165 Protein of unknown function (DUF4001) 2 45 8.0E-22 T 23-04-2016 IPR023975 Six-cysteine peptide SCIFF CLI_RS10180 0c4d001294fdf328e278f9cdcf4b68f6 448 Pfam PF00155 Aminotransferase class I and II 98 369 6.6E-23 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS10180 0c4d001294fdf328e278f9cdcf4b68f6 448 PANTHER PTHR11751 54 447 3.2E-104 T 23-04-2016 CLI_RS10180 0c4d001294fdf328e278f9cdcf4b68f6 448 SUPERFAMILY SSF53383 61 438 1.77E-66 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS10180 0c4d001294fdf328e278f9cdcf4b68f6 448 SUPERFAMILY SSF46785 3 70 9.53E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10180 0c4d001294fdf328e278f9cdcf4b68f6 448 Gene3D G3DSA:3.40.640.10 109 331 3.7E-63 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS10180 0c4d001294fdf328e278f9cdcf4b68f6 448 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.5E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS10180 0c4d001294fdf328e278f9cdcf4b68f6 448 SMART SM00345 7 66 7.3E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS10180 0c4d001294fdf328e278f9cdcf4b68f6 448 PANTHER PTHR11751:SF294 54 447 3.2E-104 T 23-04-2016 CLI_RS10180 0c4d001294fdf328e278f9cdcf4b68f6 448 Gene3D G3DSA:1.10.10.10 2 69 1.8E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14640 5d60daff1251974662e578cb2a1a6f50 213 Pfam PF00571 CBS domain 146 205 9.4E-5 T 23-04-2016 IPR000644 CBS domain CLI_RS14640 5d60daff1251974662e578cb2a1a6f50 213 Pfam PF00571 CBS domain 80 132 3.4E-5 T 23-04-2016 IPR000644 CBS domain CLI_RS14640 5d60daff1251974662e578cb2a1a6f50 213 Gene3D G3DSA:1.10.10.10 3 64 2.4E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14640 5d60daff1251974662e578cb2a1a6f50 213 SUPERFAMILY SSF54631 71 208 3.2E-23 T 23-04-2016 CLI_RS14640 5d60daff1251974662e578cb2a1a6f50 213 PIRSF PIRSF026546 4 213 1.4E-94 T 23-04-2016 IPR016842 Protein of unknown function UCP026546, HtH-CBS CLI_RS14640 5d60daff1251974662e578cb2a1a6f50 213 PANTHER PTHR11911:SF55 73 212 5.1E-63 T 23-04-2016 CLI_RS14640 5d60daff1251974662e578cb2a1a6f50 213 SMART SM00116 152 207 0.0046 T 23-04-2016 IPR000644 CBS domain CLI_RS14640 5d60daff1251974662e578cb2a1a6f50 213 SMART SM00116 86 133 0.68 T 23-04-2016 IPR000644 CBS domain CLI_RS14640 5d60daff1251974662e578cb2a1a6f50 213 PANTHER PTHR11911 73 212 5.1E-63 T 23-04-2016 CLI_RS14640 5d60daff1251974662e578cb2a1a6f50 213 SUPERFAMILY SSF46785 5 81 4.22E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14640 5d60daff1251974662e578cb2a1a6f50 213 Pfam PF08279 HTH domain 9 61 7.2E-11 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 CLI_RS14640 5d60daff1251974662e578cb2a1a6f50 213 Gene3D G3DSA:3.10.580.10 79 207 3.7E-20 T 23-04-2016 CLI_RS09530 439a56c2c08037711958785df9f990ac 71 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 7 67 14.445 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLI_RS09530 439a56c2c08037711958785df9f990ac 71 Gene3D G3DSA:1.10.287.1040 4 68 9.2E-22 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLI_RS09530 439a56c2c08037711958785df9f990ac 71 Pfam PF02609 Exonuclease VII small subunit 8 59 8.3E-19 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLI_RS09530 439a56c2c08037711958785df9f990ac 71 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 4 42 3.0E-6 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLI_RS09530 439a56c2c08037711958785df9f990ac 71 PANTHER PTHR34137 1 66 7.4E-21 T 23-04-2016 CLI_RS09530 439a56c2c08037711958785df9f990ac 71 SUPERFAMILY SSF116842 2 68 1.31E-19 T 23-04-2016 CLI_RS09530 439a56c2c08037711958785df9f990ac 71 PIRSF PIRSF006488 1 71 1.2E-22 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLI_RS09530 439a56c2c08037711958785df9f990ac 71 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 7 62 9.8E-22 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLI_RS12950 e89ebdcb26652257702241d879aa943d 170 SUPERFAMILY SSF55729 29 166 8.81E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS12950 e89ebdcb26652257702241d879aa943d 170 PANTHER PTHR23091:SF252 22 170 9.5E-49 T 23-04-2016 CLI_RS12950 e89ebdcb26652257702241d879aa943d 170 PANTHER PTHR23091 22 170 9.5E-49 T 23-04-2016 CLI_RS12950 e89ebdcb26652257702241d879aa943d 170 Pfam PF13673 Acetyltransferase (GNAT) domain 56 146 7.3E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS12950 e89ebdcb26652257702241d879aa943d 170 Gene3D G3DSA:3.40.630.30 22 166 4.1E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS17415 4cfeb6881f54fea03881e69cff10c272 274 SUPERFAMILY SSF52518 3 266 2.38E-96 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS17415 4cfeb6881f54fea03881e69cff10c272 274 PANTHER PTHR11624 4 273 3.7E-141 T 23-04-2016 IPR033247 Transketolase family CLI_RS17415 4cfeb6881f54fea03881e69cff10c272 274 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 11 267 1.2E-64 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CLI_RS17415 4cfeb6881f54fea03881e69cff10c272 274 PANTHER PTHR11624:SF86 4 273 3.7E-141 T 23-04-2016 CLI_RS17415 4cfeb6881f54fea03881e69cff10c272 274 Gene3D G3DSA:3.40.50.970 2 271 2.4E-115 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS17415 4cfeb6881f54fea03881e69cff10c272 274 ProSitePatterns PS00801 Transketolase signature 1. 16 36 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CLI_RS17150 46fca1f636f95919113664c134eee60f 230 Gene3D G3DSA:1.10.10.10 126 229 4.5E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17150 46fca1f636f95919113664c134eee60f 230 PANTHER PTHR26402 3 229 3.5E-100 T 23-04-2016 CLI_RS17150 46fca1f636f95919113664c134eee60f 230 Gene3D G3DSA:3.40.50.2300 3 121 3.5E-43 T 23-04-2016 CLI_RS17150 46fca1f636f95919113664c134eee60f 230 SMART SM00862 150 226 3.3E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS17150 46fca1f636f95919113664c134eee60f 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 5.8E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS17150 46fca1f636f95919113664c134eee60f 230 PANTHER PTHR26402:SF50 3 229 3.5E-100 T 23-04-2016 CLI_RS17150 46fca1f636f95919113664c134eee60f 230 SUPERFAMILY SSF52172 3 183 1.16E-41 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS17150 46fca1f636f95919113664c134eee60f 230 SMART SM00448 3 113 8.6E-45 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS17150 46fca1f636f95919113664c134eee60f 230 Pfam PF00072 Response regulator receiver domain 5 110 3.2E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS15175 0acedcbdcb32983902aaf44df2679849 495 PIRSF PIRSF016636 1 495 1.8E-139 T 23-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB CLI_RS15175 0acedcbdcb32983902aaf44df2679849 495 PIRSF PIRSF500217 1 495 1.5E-143 T 23-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 CLI_RS15175 0acedcbdcb32983902aaf44df2679849 495 PANTHER PTHR13285 1 452 2.4E-232 T 23-04-2016 CLI_RS15175 0acedcbdcb32983902aaf44df2679849 495 PANTHER PTHR13285:SF24 1 452 2.4E-232 T 23-04-2016 CLI_RS15175 0acedcbdcb32983902aaf44df2679849 495 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 158 357 1.1E-26 T 23-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT CLI_RS08540 384108c73465af017af4107af24075c4 220 SUPERFAMILY SSF46689 7 78 1.08E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08540 384108c73465af017af4107af24075c4 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 2.45E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS08540 384108c73465af017af4107af24075c4 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 2.45E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS08540 384108c73465af017af4107af24075c4 220 PANTHER PTHR30055 2 113 1.2E-13 T 23-04-2016 CLI_RS08540 384108c73465af017af4107af24075c4 220 Gene3D G3DSA:1.10.357.10 13 159 2.1E-15 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS08540 384108c73465af017af4107af24075c4 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 63 1.3E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS04300 4b7f81592a7022e19505eab357674244 438 PANTHER PTHR30588 1 437 1.8E-201 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CLI_RS04300 4b7f81592a7022e19505eab357674244 438 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 413 2.0E-102 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CLI_RS04300 4b7f81592a7022e19505eab357674244 438 Pfam PF05525 Branched-chain amino acid transport protein 6 424 3.3E-119 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CLI_RS04300 4b7f81592a7022e19505eab357674244 438 PANTHER PTHR30588:SF0 1 437 1.8E-201 T 23-04-2016 CLI_RS10615 721ba76725154d5f7c4adc4e7e6c4933 276 Gene3D G3DSA:3.20.80.10 128 272 2.9E-10 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS10615 721ba76725154d5f7c4adc4e7e6c4933 276 PANTHER PTHR30204:SF22 1 276 2.5E-101 T 23-04-2016 CLI_RS10615 721ba76725154d5f7c4adc4e7e6c4933 276 SMART SM00422 6 76 5.0E-13 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS10615 721ba76725154d5f7c4adc4e7e6c4933 276 Pfam PF06445 GyrI-like small molecule binding domain 205 272 2.7E-8 T 23-04-2016 IPR029442 GyrI-like small molecule binding domain CLI_RS10615 721ba76725154d5f7c4adc4e7e6c4933 276 Pfam PF13411 MerR HTH family regulatory protein 6 74 6.0E-12 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS10615 721ba76725154d5f7c4adc4e7e6c4933 276 Gene3D G3DSA:1.10.1660.10 3 74 1.4E-20 T 23-04-2016 CLI_RS10615 721ba76725154d5f7c4adc4e7e6c4933 276 PANTHER PTHR30204 1 276 2.5E-101 T 23-04-2016 CLI_RS10615 721ba76725154d5f7c4adc4e7e6c4933 276 SUPERFAMILY SSF55136 213 272 6.8E-9 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS10615 721ba76725154d5f7c4adc4e7e6c4933 276 SUPERFAMILY SSF46955 5 108 2.53E-21 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS18525 29df4cdb5d88042b1a3d79018cba2d13 315 PANTHER PTHR10996:SF168 1 312 2.5E-175 T 23-04-2016 CLI_RS18525 29df4cdb5d88042b1a3d79018cba2d13 315 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 217 233 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLI_RS18525 29df4cdb5d88042b1a3d79018cba2d13 315 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 12 310 1.0E-11 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CLI_RS18525 29df4cdb5d88042b1a3d79018cba2d13 315 Gene3D G3DSA:3.40.50.720 114 279 1.0E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS18525 29df4cdb5d88042b1a3d79018cba2d13 315 PANTHER PTHR10996 1 312 2.5E-175 T 23-04-2016 CLI_RS18525 29df4cdb5d88042b1a3d79018cba2d13 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 277 1.0E-51 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLI_RS18525 29df4cdb5d88042b1a3d79018cba2d13 315 Gene3D G3DSA:3.40.50.720 5 113 2.5E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS18525 29df4cdb5d88042b1a3d79018cba2d13 315 SUPERFAMILY SSF51735 98 279 6.18E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS18525 29df4cdb5d88042b1a3d79018cba2d13 315 SUPERFAMILY SSF52283 32 119 1.06E-12 T 23-04-2016 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 Pfam PF00672 HAMP domain 201 266 1.1E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 SUPERFAMILY SSF47384 261 345 2.94E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 PANTHER PTHR24423:SF511 92 165 3.6E-201 T 23-04-2016 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 PANTHER PTHR24423:SF511 4 35 3.6E-201 T 23-04-2016 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 PANTHER PTHR24423:SF511 212 504 3.6E-201 T 23-04-2016 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 Pfam PF00512 His Kinase A (phospho-acceptor) domain 278 340 2.5E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 Gene3D G3DSA:1.10.287.130 269 331 4.5E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 PANTHER PTHR24423 4 35 3.6E-201 T 23-04-2016 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 SMART SM00387 391 502 6.6E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 SMART SM00304 218 270 9.8E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 SMART SM00388 278 345 1.1E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 SUPERFAMILY SSF158472 224 268 4.18E-6 T 23-04-2016 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 4.4E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 456 4.4E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 Gene3D G3DSA:3.30.565.10 332 500 5.8E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 PANTHER PTHR24423 92 165 3.6E-201 T 23-04-2016 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 PANTHER PTHR24423 212 504 3.6E-201 T 23-04-2016 CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 495 4.1E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS02035 b2389e8e19cd2d6589a4e91f0304ec6e 504 SUPERFAMILY SSF55874 335 498 2.36E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS14175 f255b1e175ecb4ff0cae2b14e26cdeae 276 PANTHER PTHR11908:SF93 1 275 1.5E-138 T 23-04-2016 CLI_RS14175 f255b1e175ecb4ff0cae2b14e26cdeae 276 SUPERFAMILY SSF56176 1 169 2.09E-33 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLI_RS14175 f255b1e175ecb4ff0cae2b14e26cdeae 276 SUPERFAMILY SSF55447 179 274 1.18E-8 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLI_RS14175 f255b1e175ecb4ff0cae2b14e26cdeae 276 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 169 7.5E-26 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CLI_RS14175 f255b1e175ecb4ff0cae2b14e26cdeae 276 PANTHER PTHR11908 1 275 1.5E-138 T 23-04-2016 CLI_RS14175 f255b1e175ecb4ff0cae2b14e26cdeae 276 Gene3D G3DSA:3.30.465.10 62 169 4.2E-15 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLI_RS14175 f255b1e175ecb4ff0cae2b14e26cdeae 276 Gene3D G3DSA:3.30.43.10 1 57 9.0E-13 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CLI_RS10820 b9493fa996535d08507a9b86e570cbe6 246 Pfam PF13649 Methyltransferase domain 38 129 5.3E-11 T 23-04-2016 CLI_RS10820 b9493fa996535d08507a9b86e570cbe6 246 SUPERFAMILY SSF53335 17 230 3.88E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS10820 b9493fa996535d08507a9b86e570cbe6 246 Gene3D G3DSA:3.40.50.150 21 138 3.1E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS10820 b9493fa996535d08507a9b86e570cbe6 246 Gene3D G3DSA:3.40.50.150 202 235 3.1E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS10820 b9493fa996535d08507a9b86e570cbe6 246 PANTHER PTHR10108 12 133 1.6E-13 T 23-04-2016 CLI_RS07785 1eaafb4be0075ce6c37743d10fb6ea82 365 Pfam PF00005 ABC transporter 19 160 1.4E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS07785 1eaafb4be0075ce6c37743d10fb6ea82 365 Gene3D G3DSA:3.40.50.300 3 233 4.1E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07785 1eaafb4be0075ce6c37743d10fb6ea82 365 SUPERFAMILY SSF50331 236 357 3.97E-15 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal CLI_RS07785 1eaafb4be0075ce6c37743d10fb6ea82 365 SUPERFAMILY SSF52540 3 241 6.21E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07785 1eaafb4be0075ce6c37743d10fb6ea82 365 PANTHER PTHR24220 4 325 9.8E-158 T 23-04-2016 CLI_RS07785 1eaafb4be0075ce6c37743d10fb6ea82 365 PANTHER PTHR24220:SF482 4 325 9.8E-158 T 23-04-2016 CLI_RS07785 1eaafb4be0075ce6c37743d10fb6ea82 365 SMART SM00382 27 210 3.9E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS07785 1eaafb4be0075ce6c37743d10fb6ea82 365 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07785 1eaafb4be0075ce6c37743d10fb6ea82 365 Gene3D G3DSA:2.40.50.140 282 328 5.6E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15565 b5f1e38524aa169e250d0cb6f5c360d4 788 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS15565 b5f1e38524aa169e250d0cb6f5c360d4 788 PANTHER PTHR30217 1 787 0.0 T 23-04-2016 CLI_RS15565 b5f1e38524aa169e250d0cb6f5c360d4 788 Pfam PF01136 Peptidase family U32 76 298 7.1E-87 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS15565 b5f1e38524aa169e250d0cb6f5c360d4 788 Pfam PF01136 Peptidase family U32 594 750 5.5E-12 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS15565 b5f1e38524aa169e250d0cb6f5c360d4 788 Pfam PF12392 Collagenase 376 492 2.1E-22 T 23-04-2016 IPR020988 Peptidase U32, collagenase KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS15565 b5f1e38524aa169e250d0cb6f5c360d4 788 PANTHER PTHR30217:SF10 1 787 0.0 T 23-04-2016 CLI_RS01720 ce7dd8dfef009b6ddbda703f1b2c88a0 345 SUPERFAMILY SSF46689 292 339 1.43E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS01720 ce7dd8dfef009b6ddbda703f1b2c88a0 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 2.0E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS01720 ce7dd8dfef009b6ddbda703f1b2c88a0 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 2.0E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS01720 ce7dd8dfef009b6ddbda703f1b2c88a0 345 Pfam PF12833 Helix-turn-helix domain 260 337 1.9E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS01720 ce7dd8dfef009b6ddbda703f1b2c88a0 345 PANTHER PTHR11019:SF61 35 345 7.4E-98 T 23-04-2016 CLI_RS01720 ce7dd8dfef009b6ddbda703f1b2c88a0 345 PANTHER PTHR11019 35 345 7.4E-98 T 23-04-2016 CLI_RS01720 ce7dd8dfef009b6ddbda703f1b2c88a0 345 SMART SM00342 253 337 7.0E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS01720 ce7dd8dfef009b6ddbda703f1b2c88a0 345 Gene3D G3DSA:1.10.10.60 238 289 3.6E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS01720 ce7dd8dfef009b6ddbda703f1b2c88a0 345 Gene3D G3DSA:1.10.10.60 292 338 1.6E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS10405 c7b4dcd2d196c9506aa9625c820672cf 421 SUPERFAMILY SSF51556 50 370 4.68E-107 T 23-04-2016 IPR032466 Metal-dependent hydrolase CLI_RS10405 c7b4dcd2d196c9506aa9625c820672cf 421 PANTHER PTHR32027:SF0 1 421 5.5E-179 T 23-04-2016 CLI_RS10405 c7b4dcd2d196c9506aa9625c820672cf 421 SUPERFAMILY SSF51338 2 73 3.56E-13 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS10405 c7b4dcd2d196c9506aa9625c820672cf 421 Gene3D G3DSA:3.20.20.140 58 359 2.7E-124 T 23-04-2016 CLI_RS10405 c7b4dcd2d196c9506aa9625c820672cf 421 Gene3D G3DSA:2.30.40.10 2 57 1.1E-10 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS10405 c7b4dcd2d196c9506aa9625c820672cf 421 Pfam PF07969 Amidohydrolase family 38 399 2.5E-50 T 23-04-2016 IPR013108 Amidohydrolase 3 CLI_RS10405 c7b4dcd2d196c9506aa9625c820672cf 421 PANTHER PTHR32027 1 421 5.5E-179 T 23-04-2016 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 PANTHER PTHR11766:SF1 4 396 8.5E-218 T 23-04-2016 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 56 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 Gene3D G3DSA:3.40.50.620 11 231 3.0E-79 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 396 3.6E-117 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 45.797 T 23-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 50 72 6.0E-24 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 165 180 6.0E-24 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 182 204 6.0E-24 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 215 227 6.0E-24 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 SMART SM00363 341 400 1.9E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 Pfam PF01479 S4 domain 343 385 1.8E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 SUPERFAMILY SSF52374 5 321 2.0E-87 T 23-04-2016 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 Gene3D G3DSA:3.10.290.10 333 396 2.2E-21 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 Pfam PF00579 tRNA synthetases class I (W and Y) 35 322 7.7E-76 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 Gene3D G3DSA:1.10.240.10 232 332 3.0E-33 T 23-04-2016 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 PANTHER PTHR11766 4 396 8.5E-218 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 CLI_RS06245 07f7f6cd8ddb794b497ffec82ff0331a 400 SUPERFAMILY SSF55174 303 396 1.02E-18 T 23-04-2016 CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 SMART SM00388 258 325 1.1E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 SUPERFAMILY SSF47384 245 321 2.55E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 SMART SM00304 191 243 6.8E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 SUPERFAMILY SSF55874 329 463 1.57E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 Pfam PF00672 HAMP domain 176 239 3.0E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 SMART SM00387 368 473 1.3E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 464 2.8E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 PANTHER PTHR24423 185 461 7.9E-50 T 23-04-2016 CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 PANTHER PTHR24423 7 13 7.9E-50 T 23-04-2016 CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 Gene3D G3DSA:1.10.287.130 252 321 3.7E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 SUPERFAMILY SSF158472 193 242 6.28E-9 T 23-04-2016 CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 321 7.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS03270 145d4b8332dc9b3e473e3cc747938b9c 473 Gene3D G3DSA:3.30.565.10 333 461 7.9E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03490 4282f083cbf37b8d2905828cc9c87b20 279 Pfam PF03123 CAT RNA binding domain 1 54 8.8E-21 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS03490 4282f083cbf37b8d2905828cc9c87b20 279 SUPERFAMILY SSF50151 1 52 8.5E-17 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS03490 4282f083cbf37b8d2905828cc9c87b20 279 Gene3D G3DSA:1.10.1790.10 65 163 4.9E-30 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS03490 4282f083cbf37b8d2905828cc9c87b20 279 Gene3D G3DSA:1.10.1790.10 170 278 1.6E-30 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS03490 4282f083cbf37b8d2905828cc9c87b20 279 SMART SM01061 1 59 6.3E-27 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS03490 4282f083cbf37b8d2905828cc9c87b20 279 Pfam PF00874 PRD domain 76 163 4.5E-23 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS03490 4282f083cbf37b8d2905828cc9c87b20 279 Pfam PF00874 PRD domain 181 274 7.0E-19 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS03490 4282f083cbf37b8d2905828cc9c87b20 279 PANTHER PTHR30185 1 279 2.6E-134 T 23-04-2016 CLI_RS03490 4282f083cbf37b8d2905828cc9c87b20 279 SUPERFAMILY SSF63520 172 275 5.36E-25 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS03490 4282f083cbf37b8d2905828cc9c87b20 279 SUPERFAMILY SSF63520 58 166 2.22E-29 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS03490 4282f083cbf37b8d2905828cc9c87b20 279 PANTHER PTHR30185:SF2 1 279 2.6E-134 T 23-04-2016 CLI_RS03490 4282f083cbf37b8d2905828cc9c87b20 279 Gene3D G3DSA:2.30.24.10 1 54 3.9E-21 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS00930 5a089b4889b4b5826978937fc1e63221 235 SUPERFAMILY SSF143842 32 231 6.54E-38 T 23-04-2016 IPR014794 TATA-box binding CLI_RS00930 5a089b4889b4b5826978937fc1e63221 235 Pfam PF08680 TATA-box binding 60 235 6.6E-8 T 23-04-2016 IPR014794 TATA-box binding CLI_RS00930 5a089b4889b4b5826978937fc1e63221 235 Gene3D G3DSA:3.30.360.40 166 235 1.3E-6 T 23-04-2016 CLI_RS13305 1845acc2275d9ad7f973cb98d2f816d5 273 PANTHER PTHR30435:SF15 5 243 3.5E-72 T 23-04-2016 CLI_RS13305 1845acc2275d9ad7f973cb98d2f816d5 273 Pfam PF03963 Flagellar hook capping protein - N-terminal region 40 109 1.6E-19 T 23-04-2016 IPR005648 Flagellar hook capping protein CLI_RS13305 1845acc2275d9ad7f973cb98d2f816d5 273 PANTHER PTHR30435 5 243 3.5E-72 T 23-04-2016 CLI_RS00290 fcb0962fcc4173e99bdb4c846baf72eb 187 SUPERFAMILY SSF88946 5 105 1.62E-14 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS00290 fcb0962fcc4173e99bdb4c846baf72eb 187 Pfam PF08281 Sigma-70, region 4 123 175 2.5E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS00290 fcb0962fcc4173e99bdb4c846baf72eb 187 Gene3D G3DSA:1.10.10.10 119 179 1.1E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS00290 fcb0962fcc4173e99bdb4c846baf72eb 187 Pfam PF04542 Sigma-70 region 2 24 91 3.2E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS00290 fcb0962fcc4173e99bdb4c846baf72eb 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 179 1.2E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS00290 fcb0962fcc4173e99bdb4c846baf72eb 187 Gene3D G3DSA:1.10.1740.10 4 106 1.1E-13 T 23-04-2016 CLI_RS00290 fcb0962fcc4173e99bdb4c846baf72eb 187 SUPERFAMILY SSF88659 112 179 6.35E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS00290 fcb0962fcc4173e99bdb4c846baf72eb 187 PANTHER PTHR30173 1 179 4.3E-43 T 23-04-2016 CLI_RS00290 fcb0962fcc4173e99bdb4c846baf72eb 187 PANTHER PTHR30173:SF24 1 179 4.3E-43 T 23-04-2016 CLI_RS06985 4ed7054f328a098b2f1b5d6617c5aebe 304 Pfam PF01497 Periplasmic binding protein 56 277 5.0E-36 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CLI_RS06985 4ed7054f328a098b2f1b5d6617c5aebe 304 SUPERFAMILY SSF53807 40 304 1.73E-64 T 23-04-2016 CLI_RS06985 4ed7054f328a098b2f1b5d6617c5aebe 304 Gene3D G3DSA:3.40.50.1980 53 171 3.6E-31 T 23-04-2016 CLI_RS06985 4ed7054f328a098b2f1b5d6617c5aebe 304 PANTHER PTHR30535 6 303 6.7E-73 T 23-04-2016 CLI_RS06985 4ed7054f328a098b2f1b5d6617c5aebe 304 PANTHER PTHR30535:SF5 6 303 6.7E-73 T 23-04-2016 CLI_RS06985 4ed7054f328a098b2f1b5d6617c5aebe 304 Gene3D G3DSA:3.40.50.1980 174 302 3.0E-31 T 23-04-2016 CLI_RS01195 462021c20d8dc12098b74e8ab43d06eb 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 74 111 2.9E-5 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS01195 462021c20d8dc12098b74e8ab43d06eb 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 154 1.4E-8 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS01195 462021c20d8dc12098b74e8ab43d06eb 198 SUPERFAMILY SSF51161 6 178 1.94E-56 T 23-04-2016 IPR011004 Trimeric LpxA-like CLI_RS01195 462021c20d8dc12098b74e8ab43d06eb 198 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 129 157 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CLI_RS01195 462021c20d8dc12098b74e8ab43d06eb 198 PANTHER PTHR23416:SF55 1 184 2.2E-97 T 23-04-2016 CLI_RS01195 462021c20d8dc12098b74e8ab43d06eb 198 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 10 169 1.2E-74 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 CLI_RS01195 462021c20d8dc12098b74e8ab43d06eb 198 Gene3D G3DSA:1.10.3130.10 6 62 9.2E-21 T 23-04-2016 CLI_RS01195 462021c20d8dc12098b74e8ab43d06eb 198 PANTHER PTHR23416 1 184 2.2E-97 T 23-04-2016 CLI_RS01195 462021c20d8dc12098b74e8ab43d06eb 198 Gene3D G3DSA:2.160.10.10 63 181 1.5E-35 T 23-04-2016 CLI_RS01195 462021c20d8dc12098b74e8ab43d06eb 198 PIRSF PIRSF000441 2 195 3.0E-82 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 CLI_RS11125 1d8a1cce09e4970f3f8d62f4f01699f4 276 PANTHER PTHR13696:SF64 1 275 1.0E-88 T 23-04-2016 CLI_RS11125 1d8a1cce09e4970f3f8d62f4f01699f4 276 Gene3D G3DSA:3.40.50.300 3 50 7.3E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11125 1d8a1cce09e4970f3f8d62f4f01699f4 276 Gene3D G3DSA:3.40.50.300 102 274 7.3E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11125 1d8a1cce09e4970f3f8d62f4f01699f4 276 Gene3D G3DSA:3.30.70.20 52 101 6.3E-14 T 23-04-2016 CLI_RS11125 1d8a1cce09e4970f3f8d62f4f01699f4 276 PANTHER PTHR13696 1 275 1.0E-88 T 23-04-2016 CLI_RS11125 1d8a1cce09e4970f3f8d62f4f01699f4 276 SUPERFAMILY SSF52540 107 273 9.86E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11125 1d8a1cce09e4970f3f8d62f4f01699f4 276 SUPERFAMILY SSF52540 3 50 9.86E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11125 1d8a1cce09e4970f3f8d62f4f01699f4 276 Pfam PF00037 4Fe-4S binding domain 58 80 5.2E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS11125 1d8a1cce09e4970f3f8d62f4f01699f4 276 Pfam PF00037 4Fe-4S binding domain 92 110 2.8E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS11125 1d8a1cce09e4970f3f8d62f4f01699f4 276 SUPERFAMILY SSF54862 47 119 5.76E-17 T 23-04-2016 CLI_RS11125 1d8a1cce09e4970f3f8d62f4f01699f4 276 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 241 2.7E-26 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 SUPERFAMILY SSF53738 3 181 7.06E-47 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 445 1.5E-172 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 374 445 8.8E-15 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 SUPERFAMILY SSF53738 158 257 2.16E-27 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 Gene3D G3DSA:3.40.120.10 176 250 1.2E-24 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 SUPERFAMILY SSF53738 258 365 1.06E-31 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 Gene3D G3DSA:3.40.120.10 251 368 2.5E-38 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 447 43.858 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.0E-11 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 1.0E-11 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.0E-11 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 PANTHER PTHR22573:SF15 1 446 6.2E-170 T 23-04-2016 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 Gene3D G3DSA:3.30.310.50 370 446 6.8E-17 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 254 8.2E-17 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 133 4.7E-44 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 SUPERFAMILY SSF55957 358 448 1.2E-20 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 Gene3D G3DSA:3.40.120.10 3 139 2.2E-45 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 368 9.4E-35 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS17535 1c86315a117e36fe88fb705c42c26a55 449 PANTHER PTHR22573 1 446 6.2E-170 T 23-04-2016 CLI_RS03350 11982480f46f76309cfa932bc0313b54 183 PANTHER PTHR10245:SF9 2 183 1.7E-71 T 23-04-2016 CLI_RS03350 11982480f46f76309cfa932bc0313b54 183 Gene3D G3DSA:2.60.120.10 105 182 7.7E-26 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS03350 11982480f46f76309cfa932bc0313b54 183 Pfam PF01381 Helix-turn-helix 11 63 4.9E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS03350 11982480f46f76309cfa932bc0313b54 183 Gene3D G3DSA:1.10.260.40 7 104 2.8E-24 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS03350 11982480f46f76309cfa932bc0313b54 183 Pfam PF07883 Cupin domain 125 175 5.6E-12 T 23-04-2016 IPR013096 Cupin 2, conserved barrel CLI_RS03350 11982480f46f76309cfa932bc0313b54 183 SUPERFAMILY SSF47413 2 70 1.18E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS03350 11982480f46f76309cfa932bc0313b54 183 SUPERFAMILY SSF51182 58 182 2.48E-22 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS03350 11982480f46f76309cfa932bc0313b54 183 PANTHER PTHR10245 2 183 1.7E-71 T 23-04-2016 CLI_RS03350 11982480f46f76309cfa932bc0313b54 183 SMART SM00530 10 65 1.9E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS16135 3e5ff68e34833ce00f0170623ba3a0ee 1430 PANTHER PTHR32329:SF4 5 1429 0.0 T 23-04-2016 CLI_RS16135 3e5ff68e34833ce00f0170623ba3a0ee 1430 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 672 891 4.9E-82 T 23-04-2016 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLI_RS16135 3e5ff68e34833ce00f0170623ba3a0ee 1430 SUPERFAMILY SSF53067 6 256 1.76E-56 T 23-04-2016 CLI_RS16135 3e5ff68e34833ce00f0170623ba3a0ee 1430 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 906 1224 1.8E-57 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS16135 3e5ff68e34833ce00f0170623ba3a0ee 1430 SUPERFAMILY SSF53067 321 576 8.03E-50 T 23-04-2016 CLI_RS16135 3e5ff68e34833ce00f0170623ba3a0ee 1430 Gene3D G3DSA:3.30.420.40 416 556 1.4E-47 T 23-04-2016 CLI_RS16135 3e5ff68e34833ce00f0170623ba3a0ee 1430 Gene3D G3DSA:3.30.420.40 99 234 1.3E-45 T 23-04-2016 CLI_RS16135 3e5ff68e34833ce00f0170623ba3a0ee 1430 PANTHER PTHR32329 5 1429 0.0 T 23-04-2016 CLI_RS16135 3e5ff68e34833ce00f0170623ba3a0ee 1430 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 8 255 1.2E-20 T 23-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS16135 3e5ff68e34833ce00f0170623ba3a0ee 1430 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 322 576 4.1E-35 T 23-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS12580 2c06f8d2efcb3af01e56550d9ec2c52c 91 Pfam PF04025 Domain of unknown function (DUF370) 5 77 9.4E-38 T 23-04-2016 IPR007169 Uncharacterised protein family UPF0296 CLI_RS12580 2c06f8d2efcb3af01e56550d9ec2c52c 91 Hamap MF_01503 UPF0296 protein . 3 91 29.98 T 23-04-2016 IPR007169 Uncharacterised protein family UPF0296 CLI_RS12580 2c06f8d2efcb3af01e56550d9ec2c52c 91 PANTHER PTHR38449 2 91 2.2E-47 T 23-04-2016 CLI_RS12580 2c06f8d2efcb3af01e56550d9ec2c52c 91 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 78 9.0E-36 T 23-04-2016 IPR007169 Uncharacterised protein family UPF0296 CLI_RS17655 37840a6af8263d6b5d7f819110669e1c 538 Gene3D G3DSA:1.20.58.220 443 536 4.3E-20 T 23-04-2016 CLI_RS17655 37840a6af8263d6b5d7f819110669e1c 538 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 6 313 1.1E-75 T 23-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 CLI_RS17655 37840a6af8263d6b5d7f819110669e1c 538 PANTHER PTHR10010 1 456 5.8E-119 T 23-04-2016 CLI_RS17655 37840a6af8263d6b5d7f819110669e1c 538 SUPERFAMILY SSF109755 332 537 1.88E-53 T 23-04-2016 CLI_RS17655 37840a6af8263d6b5d7f819110669e1c 538 Gene3D G3DSA:1.20.58.220 328 437 1.7E-22 T 23-04-2016 CLI_RS17655 37840a6af8263d6b5d7f819110669e1c 538 Pfam PF02690 Na+/Pi-cotransporter 147 258 1.8E-19 T 23-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 CLI_RS17655 37840a6af8263d6b5d7f819110669e1c 538 Pfam PF02690 Na+/Pi-cotransporter 16 151 1.8E-53 T 23-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 CLI_RS17655 37840a6af8263d6b5d7f819110669e1c 538 Pfam PF01895 PhoU domain 450 534 9.9E-16 T 23-04-2016 IPR026022 PhoU domain CLI_RS17655 37840a6af8263d6b5d7f819110669e1c 538 Pfam PF01895 PhoU domain 346 430 3.3E-17 T 23-04-2016 IPR026022 PhoU domain CLI_RS17655 37840a6af8263d6b5d7f819110669e1c 538 PANTHER PTHR10010:SF26 1 456 5.8E-119 T 23-04-2016 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 PANTHER PTHR10836:SF37 1 334 7.5E-219 T 23-04-2016 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 SUPERFAMILY SSF51735 2 169 1.62E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 PANTHER PTHR10836 1 334 7.5E-219 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 153 1.5E-60 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 3.8E-72 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 Gene3D G3DSA:3.30.360.10 162 316 8.3E-81 T 23-04-2016 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 2.3E-40 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 2.3E-40 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 2.3E-40 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 2.3E-40 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 2.3E-40 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 PIRSF PIRSF000149 1 335 8.6E-141 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 SMART SM00846 2 153 2.0E-95 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 SUPERFAMILY SSF55347 153 315 1.73E-75 T 23-04-2016 CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 Gene3D G3DSA:3.40.50.720 1 161 2.7E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01295 be415c22291ee5562f8b750d7a93f9b8 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 326 3.1E-141 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS14425 d02ed6291407cf3cfb674468246687ef 264 SMART SM00382 27 216 4.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS14425 d02ed6291407cf3cfb674468246687ef 264 SUPERFAMILY SSF52540 3 227 4.47E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14425 d02ed6291407cf3cfb674468246687ef 264 PANTHER PTHR24220:SF582 4 244 1.7E-127 T 23-04-2016 CLI_RS14425 d02ed6291407cf3cfb674468246687ef 264 Gene3D G3DSA:3.40.50.300 3 231 2.0E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14425 d02ed6291407cf3cfb674468246687ef 264 PANTHER PTHR24220 4 244 1.7E-127 T 23-04-2016 CLI_RS14425 d02ed6291407cf3cfb674468246687ef 264 Pfam PF00005 ABC transporter 18 167 6.6E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS14425 d02ed6291407cf3cfb674468246687ef 264 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS03315 d69308fa95aaf915602c9ac14021ac7a 343 PANTHER PTHR33154:SF1 2 343 1.5E-270 T 23-04-2016 CLI_RS03315 d69308fa95aaf915602c9ac14021ac7a 343 Pfam PF01022 Bacterial regulatory protein, arsR family 269 310 3.5E-8 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS03315 d69308fa95aaf915602c9ac14021ac7a 343 SMART SM00418 262 340 2.1E-12 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS03315 d69308fa95aaf915602c9ac14021ac7a 343 PANTHER PTHR33154 2 343 1.5E-270 T 23-04-2016 CLI_RS03315 d69308fa95aaf915602c9ac14021ac7a 343 SUPERFAMILY SSF46785 263 337 5.01E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03315 d69308fa95aaf915602c9ac14021ac7a 343 Gene3D G3DSA:1.10.10.10 259 340 7.5E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03315 d69308fa95aaf915602c9ac14021ac7a 343 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 264 279 1.6E-6 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS03315 d69308fa95aaf915602c9ac14021ac7a 343 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 311 326 1.6E-6 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS03315 d69308fa95aaf915602c9ac14021ac7a 343 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 296 311 1.6E-6 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS18130 312d1e532196741e44241fb33ebd2096 601 SMART SM00382 191 330 1.1E-26 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS18130 312d1e532196741e44241fb33ebd2096 601 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 106 598 2.8E-237 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLI_RS18130 312d1e532196741e44241fb33ebd2096 601 Gene3D G3DSA:3.40.50.300 152 336 1.5E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18130 312d1e532196741e44241fb33ebd2096 601 Gene3D G3DSA:1.10.8.60 337 402 1.1E-25 T 23-04-2016 CLI_RS18130 312d1e532196741e44241fb33ebd2096 601 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 601 37.726 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLI_RS18130 312d1e532196741e44241fb33ebd2096 601 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 195 326 7.8E-46 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS18130 312d1e532196741e44241fb33ebd2096 601 ProSitePatterns PS00674 AAA-protein family signature. 298 316 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CLI_RS18130 312d1e532196741e44241fb33ebd2096 601 PANTHER PTHR23076 10 598 1.0E-303 T 23-04-2016 CLI_RS18130 312d1e532196741e44241fb33ebd2096 601 Pfam PF01434 Peptidase family M41 389 597 1.4E-78 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CLI_RS18130 312d1e532196741e44241fb33ebd2096 601 SUPERFAMILY SSF52540 151 398 3.27E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18130 312d1e532196741e44241fb33ebd2096 601 SUPERFAMILY SSF140990 409 600 1.57E-71 T 23-04-2016 CLI_RS05310 6a6dc43440d770f2da2dc001b2f73989 174 SMART SM00347 57 160 6.4E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS05310 6a6dc43440d770f2da2dc001b2f73989 174 Pfam PF01047 MarR family 64 122 7.3E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS05310 6a6dc43440d770f2da2dc001b2f73989 174 SUPERFAMILY SSF46785 62 172 2.18E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05310 6a6dc43440d770f2da2dc001b2f73989 174 PANTHER PTHR35790:SF1 1 174 2.0E-42 T 23-04-2016 CLI_RS05310 6a6dc43440d770f2da2dc001b2f73989 174 PANTHER PTHR35790 1 174 2.0E-42 T 23-04-2016 CLI_RS05310 6a6dc43440d770f2da2dc001b2f73989 174 Gene3D G3DSA:1.10.10.10 63 172 1.7E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03380 1efa6039c863ff683eb2d711bbe5ac93 631 SMART SM00534 322 507 1.7E-57 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS03380 1efa6039c863ff683eb2d711bbe5ac93 631 PANTHER PTHR11361:SF90 16 597 0.0 T 23-04-2016 CLI_RS03380 1efa6039c863ff683eb2d711bbe5ac93 631 SMART SM00533 9 311 2.0E-8 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLI_RS03380 1efa6039c863ff683eb2d711bbe5ac93 631 Gene3D G3DSA:3.40.50.300 289 507 8.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03380 1efa6039c863ff683eb2d711bbe5ac93 631 Pfam PF00488 MutS domain V 325 506 1.6E-33 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS03380 1efa6039c863ff683eb2d711bbe5ac93 631 PIRSF PIRSF005814 1 631 7.9E-192 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CLI_RS03380 1efa6039c863ff683eb2d711bbe5ac93 631 SUPERFAMILY SSF48334 21 284 3.14E-21 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLI_RS03380 1efa6039c863ff683eb2d711bbe5ac93 631 SUPERFAMILY SSF52540 289 508 5.16E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03380 1efa6039c863ff683eb2d711bbe5ac93 631 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 404 420 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS03380 1efa6039c863ff683eb2d711bbe5ac93 631 PANTHER PTHR11361 16 597 0.0 T 23-04-2016 CLI_RS04360 3de3b751b80f0cfceb739fcdac6b1986 449 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 188 435 6.8E-58 T 23-04-2016 IPR018763 Protein of unknown function DUF2334 CLI_RS04360 3de3b751b80f0cfceb739fcdac6b1986 449 Pfam PF07833 Copper amine oxidase N-terminal domain 81 167 9.9E-8 T 23-04-2016 IPR012854 Copper amine oxidase-like, N-terminal CLI_RS09585 c5197964e2146923ac0f2c010d8d5446 310 SUPERFAMILY SSF52540 37 268 4.12E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09585 c5197964e2146923ac0f2c010d8d5446 310 Gene3D G3DSA:3.40.50.300 141 277 4.3E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09585 c5197964e2146923ac0f2c010d8d5446 310 PANTHER PTHR20953 7 263 2.7E-14 T 23-04-2016 CLI_RS09585 c5197964e2146923ac0f2c010d8d5446 310 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 31 298 1.9E-121 T 23-04-2016 IPR014217 Sporulation stage III, protein AA CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 Pfam PF02954 Bacterial regulatory protein, Fis family 600 640 3.2E-15 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 Pfam PF00158 Sigma-54 interaction domain 335 503 2.5E-67 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 Gene3D G3DSA:3.40.50.300 330 505 1.1E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 SUPERFAMILY SSF55785 201 311 2.66E-9 T 23-04-2016 IPR000014 PAS domain CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 SUPERFAMILY SSF46689 549 642 1.97E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 SUPERFAMILY SSF52540 335 577 2.07E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 Gene3D G3DSA:1.10.10.60 591 643 3.4E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 549 558 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 422 437 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 PANTHER PTHR32071 133 642 1.6E-168 T 23-04-2016 CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 606 623 1.1E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 623 643 1.1E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 PANTHER PTHR32071:SF27 133 642 1.6E-168 T 23-04-2016 CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 359 372 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 SMART SM00382 355 499 1.8E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 SUPERFAMILY SSF55781 62 202 1.18E-5 T 23-04-2016 IPR029016 GAF domain-like CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 Gene3D G3DSA:3.30.450.20 209 312 8.7E-8 T 23-04-2016 CLI_RS08440 2571bc929a3cae45b1948669a515a868 643 Gene3D G3DSA:1.10.8.60 508 582 8.5E-19 T 23-04-2016 CLI_RS13850 8c056ccf3c2179a8844ff60a5539ef4c 106 PANTHER PTHR34068 1 106 1.5E-43 T 23-04-2016 CLI_RS13850 8c056ccf3c2179a8844ff60a5539ef4c 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 23.948 T 23-04-2016 IPR002765 Uncharacterised protein family UPF0145 CLI_RS13850 8c056ccf3c2179a8844ff60a5539ef4c 106 Pfam PF01906 Putative heavy-metal-binding 1 104 2.2E-40 T 23-04-2016 IPR002765 Uncharacterised protein family UPF0145 CLI_RS13850 8c056ccf3c2179a8844ff60a5539ef4c 106 Gene3D G3DSA:3.30.110.70 1 104 2.5E-38 T 23-04-2016 IPR002765 Uncharacterised protein family UPF0145 CLI_RS13850 8c056ccf3c2179a8844ff60a5539ef4c 106 PANTHER PTHR34068:SF1 1 106 1.5E-43 T 23-04-2016 CLI_RS13850 8c056ccf3c2179a8844ff60a5539ef4c 106 SUPERFAMILY SSF117782 1 106 2.22E-39 T 23-04-2016 IPR002765 Uncharacterised protein family UPF0145 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.0E-18 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.0E-18 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.0E-18 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.0E-18 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.0E-18 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 Gene3D G3DSA:3.30.70.1450 383 450 1.5E-8 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 Gene3D G3DSA:3.30.70.1450 151 216 4.9E-11 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 PANTHER PTHR16254 1 162 1.0E-44 T 23-04-2016 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 Gene3D G3DSA:3.40.50.720 242 360 2.6E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 Gene3D G3DSA:3.40.50.720 1 149 1.4E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 SUPERFAMILY SSF51735 228 359 7.88E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 SUPERFAMILY SSF51735 1 149 4.48E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 SUPERFAMILY SSF116726 375 449 2.22E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 Pfam PF02080 TrkA-C domain 383 449 2.1E-11 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 Pfam PF02080 TrkA-C domain 153 221 2.9E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 Gene3D G3DSA:3.50.50.60 217 241 1.7E-4 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 SUPERFAMILY SSF116726 134 221 4.71E-14 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 Pfam PF02254 TrkA-N domain 3 122 1.2E-30 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CLI_RS06865 94b3a18c96b2f3e6b4b38a2a6e569236 455 Pfam PF02254 TrkA-N domain 230 346 3.7E-21 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CLI_RS12985 9562c1b7cd9bc5ff630539bf3f7c8b1f 413 Gene3D G3DSA:3.90.1150.10 282 411 4.2E-54 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS12985 9562c1b7cd9bc5ff630539bf3f7c8b1f 413 PIRSF PIRSF000412 1 412 8.0E-170 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CLI_RS12985 9562c1b7cd9bc5ff630539bf3f7c8b1f 413 PANTHER PTHR11680 6 410 7.8E-260 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CLI_RS12985 9562c1b7cd9bc5ff630539bf3f7c8b1f 413 Pfam PF00464 Serine hydroxymethyltransferase 6 382 3.9E-179 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CLI_RS12985 9562c1b7cd9bc5ff630539bf3f7c8b1f 413 SUPERFAMILY SSF53383 5 411 3.09E-183 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS12985 9562c1b7cd9bc5ff630539bf3f7c8b1f 413 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 220 236 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CLI_RS12985 9562c1b7cd9bc5ff630539bf3f7c8b1f 413 Gene3D G3DSA:3.40.640.10 35 281 1.3E-110 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS12985 9562c1b7cd9bc5ff630539bf3f7c8b1f 413 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 5 411 54.158 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 Gene3D G3DSA:1.10.10.60 590 633 2.4E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 202 261 6.3E-7 T 23-04-2016 IPR000014 PAS domain CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 SUPERFAMILY SSF52540 325 561 4.05E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 Pfam PF13188 PAS domain 202 257 4.9E-7 T 23-04-2016 IPR000014 PAS domain CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 540 549 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 PANTHER PTHR32071 114 636 3.3E-178 T 23-04-2016 CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 SUPERFAMILY SSF55785 192 301 6.63E-13 T 23-04-2016 IPR000014 PAS domain CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 SUPERFAMILY SSF46689 540 636 4.48E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 Gene3D G3DSA:3.40.50.300 322 499 3.0E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 SUPERFAMILY SSF55781 49 187 3.92E-5 T 23-04-2016 IPR029016 GAF domain-like CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 Gene3D G3DSA:1.10.8.60 500 564 3.9E-17 T 23-04-2016 CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 Pfam PF00158 Sigma-54 interaction domain 326 494 2.5E-70 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 350 363 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 PANTHER PTHR32071:SF27 114 636 3.3E-178 T 23-04-2016 CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 Gene3D G3DSA:3.30.450.40 141 186 5.6E-4 T 23-04-2016 IPR029016 GAF domain-like CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 Pfam PF02954 Bacterial regulatory protein, Fis family 593 634 8.9E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 Gene3D G3DSA:3.30.450.20 196 304 1.1E-14 T 23-04-2016 CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 SMART SM00382 346 490 3.0E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 617 636 8.4E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 600 617 8.4E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 SMART SM00091 200 268 2.4E-6 T 23-04-2016 IPR000014 PAS domain CLI_RS08420 b49b2292b263df4abe217af5e50f278c 636 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 413 428 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS03290 a4f01dffa7f583c6ccbd63b4580196ff 379 Pfam PF13303 Phosphotransferase system, EIIC 29 327 4.0E-58 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS03290 a4f01dffa7f583c6ccbd63b4580196ff 379 PANTHER PTHR40063 2 351 3.7E-106 T 23-04-2016 CLI_RS15970 d634dff836648276153d132ca60c7ac7 375 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 7 372 5.1E-23 T 23-04-2016 IPR006444 Phage major capsid protein, HK97 CLI_RS15970 d634dff836648276153d132ca60c7ac7 375 SUPERFAMILY SSF56563 111 373 4.32E-27 T 23-04-2016 CLI_RS15970 d634dff836648276153d132ca60c7ac7 375 Pfam PF05065 Phage capsid family 120 371 1.7E-12 T 23-04-2016 IPR024455 Phage capsid CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 156 170 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 6 1144 0.0 T 23-04-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|UniPathway: UPA00138 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 SUPERFAMILY SSF51569 520 831 5.68E-79 T 23-04-2016 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1100 1117 - T 23-04-2016 IPR001882 Biotin-binding site CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Gene3D G3DSA:3.40.50.20 4 132 2.7E-53 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Gene3D G3DSA:1.10.10.60 946 982 9.2E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Gene3D G3DSA:2.40.50.100 1068 1144 1.7E-26 T 23-04-2016 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Gene3D G3DSA:3.10.600.10 983 1055 4.8E-29 T 23-04-2016 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 PANTHER PTHR18866:SF103 1 1144 0.0 T 23-04-2016 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 SUPERFAMILY SSF51246 340 458 1.36E-36 T 23-04-2016 IPR011054 Rudiment single hybrid motif CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 SMART SM00878 345 452 1.4E-50 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Gene3D G3DSA:3.30.1490.20 133 205 2.0E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 SUPERFAMILY SSF52440 3 116 6.4E-45 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 325 3.3E-79 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Pfam PF00364 Biotin-requiring enzyme 1078 1143 1.0E-17 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Gene3D G3DSA:3.30.470.20 206 457 6.7E-99 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Gene3D G3DSA:3.20.20.70 505 814 7.8E-132 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 113 1.6E-43 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 SUPERFAMILY SSF89000 828 1004 3.06E-58 T 23-04-2016 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Pfam PF00682 HMGL-like 529 801 4.6E-32 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 SUPERFAMILY SSF56059 86 331 7.78E-69 T 23-04-2016 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Pfam PF02785 Biotin carboxylase C-terminal domain 345 453 7.9E-32 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 PIRSF PIRSF001594 1 1144 0.0 T 23-04-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|UniPathway: UPA00138 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 PANTHER PTHR18866 1 1144 0.0 T 23-04-2016 CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 Pfam PF02436 Conserved carboxylase domain 823 1022 1.7E-75 T 23-04-2016 IPR003379 Carboxylase, conserved domain CLI_RS16945 adc925eac35dcbdbd5231c89161c9238 1144 SUPERFAMILY SSF51230 1067 1144 5.76E-22 T 23-04-2016 IPR011053 Single hybrid motif CLI_RS09320 0f087087c25ba5da392143f2d32e910d 161 Pfam PF05119 Phage terminase, small subunit 49 144 1.2E-24 T 23-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family CLI_RS09320 0f087087c25ba5da392143f2d32e910d 161 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 39 152 6.7E-21 T 23-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family CLI_RS10105 addb029c2f089f176d0136a8424abc1b 289 SMART SM00729 15 233 6.7E-35 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS10105 addb029c2f089f176d0136a8424abc1b 289 Pfam PF04055 Radical SAM superfamily 21 174 1.5E-18 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS10105 addb029c2f089f176d0136a8424abc1b 289 SUPERFAMILY SSF102114 4 238 6.15E-36 T 23-04-2016 CLI_RS10105 addb029c2f089f176d0136a8424abc1b 289 PANTHER PTHR11918 7 216 1.8E-76 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS10105 addb029c2f089f176d0136a8424abc1b 289 PANTHER PTHR11918:SF47 7 216 1.8E-76 T 23-04-2016 CLI_RS10105 addb029c2f089f176d0136a8424abc1b 289 Gene3D G3DSA:3.80.30.20 17 214 2.4E-28 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS07330 6192be76c67c6a675aa0e59a8bd994ee 387 SUPERFAMILY SSF56796 2 384 5.63E-117 T 23-04-2016 CLI_RS07330 6192be76c67c6a675aa0e59a8bd994ee 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLI_RS07330 6192be76c67c6a675aa0e59a8bd994ee 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLI_RS07330 6192be76c67c6a675aa0e59a8bd994ee 387 Gene3D G3DSA:3.40.50.1970 1 184 1.6E-65 T 23-04-2016 CLI_RS07330 6192be76c67c6a675aa0e59a8bd994ee 387 PANTHER PTHR11496 1 384 1.3E-128 T 23-04-2016 CLI_RS07330 6192be76c67c6a675aa0e59a8bd994ee 387 Gene3D G3DSA:1.20.1090.10 185 386 4.3E-58 T 23-04-2016 CLI_RS07330 6192be76c67c6a675aa0e59a8bd994ee 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 369 1.3E-105 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 Pfam PF04509 CheC-like family 142 175 4.2E-11 T 23-04-2016 IPR007597 CheC-like protein GO:0016787 CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 Pfam PF04509 CheC-like family 44 79 1.1E-12 T 23-04-2016 IPR007597 CheC-like protein GO:0016787 CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 PANTHER PTHR22617 23 384 2.6E-40 T 23-04-2016 CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 302 377 1.7E-30 T 23-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 SUPERFAMILY SSF101801 301 383 8.76E-25 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 SUPERFAMILY SSF103039 40 230 2.7E-46 T 23-04-2016 IPR028976 CheC-like domain CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 Gene3D G3DSA:3.40.1550.10 39 228 4.1E-57 T 23-04-2016 IPR028976 CheC-like domain CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 PRINTS PR00956 Flagellar motor switch protein FliN signature 351 366 1.0E-24 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 PRINTS PR00956 Flagellar motor switch protein FliN signature 322 338 1.0E-24 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 PRINTS PR00956 Flagellar motor switch protein FliN signature 338 351 1.0E-24 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 PRINTS PR00956 Flagellar motor switch protein FliN signature 305 321 1.0E-24 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 305 375 2.1E-25 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CLI_RS13635 b8bf0af663008c80041a3a2354271085 386 Gene3D G3DSA:2.30.330.10 296 384 1.3E-35 T 23-04-2016 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 Gene3D G3DSA:2.40.30.10 288 388 2.3E-37 T 23-04-2016 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 SMART SM00838 581 668 7.4E-59 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 673 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 SUPERFAMILY SSF54980 385 463 7.55E-24 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 SUPERFAMILY SSF52540 1 265 9.35E-107 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 SMART SM00889 463 579 1.9E-68 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 Gene3D G3DSA:3.30.70.240 580 666 4.1E-35 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 Gene3D G3DSA:3.40.50.300 1 270 1.1E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 Pfam PF14492 Elongation Factor G, domain II 387 461 1.1E-32 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 Pfam PF00009 Elongation factor Tu GTP binding domain 1 265 5.8E-66 T 23-04-2016 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 Gene3D G3DSA:3.30.230.10 467 579 5.2E-46 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 PRINTS PR00315 GTP-binding elongation factor signature 63 73 1.8E-9 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 PRINTS PR00315 GTP-binding elongation factor signature 115 124 1.8E-9 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 PRINTS PR00315 GTP-binding elongation factor signature 79 90 1.8E-9 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 PRINTS PR00315 GTP-binding elongation factor signature 43 51 1.8E-9 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 Pfam PF00679 Elongation factor G C-terminus 581 667 1.7E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 Pfam PF03764 Elongation factor G, domain IV 462 578 1.1E-45 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 PANTHER PTHR23115:SF66 1 162 0.0 T 23-04-2016 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 PANTHER PTHR23115:SF66 238 266 0.0 T 23-04-2016 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 PANTHER PTHR23115:SF66 286 672 0.0 T 23-04-2016 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 SUPERFAMILY SSF54980 584 671 4.7E-31 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 Hamap MF_00054_B Elongation factor G [fusA]. 1 672 108.711 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 165 4.5E-35 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 PANTHER PTHR23115 1 162 0.0 T 23-04-2016 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 PANTHER PTHR23115 238 266 0.0 T 23-04-2016 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 PANTHER PTHR23115 286 672 0.0 T 23-04-2016 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 SUPERFAMILY SSF50447 248 387 3.03E-35 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 Gene3D G3DSA:3.30.70.870 389 463 1.2E-36 T 23-04-2016 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 SUPERFAMILY SSF54211 465 579 5.31E-41 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 Pfam PF03144 Elongation factor Tu domain 2 307 374 2.6E-15 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CLI_RS17855 d2882ef8693d11943a22b04909e563b9 673 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 36 51 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 PANTHER PTHR32432 2 411 4.7E-134 T 23-04-2016 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 Gene3D G3DSA:3.90.640.10 232 293 2.5E-13 T 23-04-2016 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 SUPERFAMILY SSF53067 196 366 2.18E-31 T 23-04-2016 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 SMART SM00842 5 193 5.8E-69 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 PIRSF PIRSF003101 1 417 7.0E-110 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 5 368 1.3E-93 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 SUPERFAMILY SSF53067 3 194 1.19E-45 T 23-04-2016 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 PANTHER PTHR32432:SF4 2 411 4.7E-134 T 23-04-2016 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 Pfam PF02491 SHS2 domain inserted in FTSA 86 158 1.6E-22 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 Pfam PF14450 Cell division protein FtsA 204 365 4.7E-19 T 23-04-2016 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 Gene3D G3DSA:3.30.420.40 294 348 7.4E-19 T 23-04-2016 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 Gene3D G3DSA:3.30.420.40 194 231 7.4E-19 T 23-04-2016 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 Gene3D G3DSA:3.30.420.40 3 136 3.7E-30 T 23-04-2016 CLI_RS12695 c2c0a5dae7fdf8723d250e1bbd12fee1 417 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 417 26.232 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 CLI_RS07500 34eb863b98dfc6190665500125661322 309 SUPERFAMILY SSF53335 5 112 1.49E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS07500 34eb863b98dfc6190665500125661322 309 SUPERFAMILY SSF53335 213 308 1.49E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS07500 34eb863b98dfc6190665500125661322 309 PIRSF PIRSF004486 1 309 8.8E-118 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS07500 34eb863b98dfc6190665500125661322 309 PANTHER PTHR11265:SF0 1 309 2.3E-151 T 23-04-2016 CLI_RS07500 34eb863b98dfc6190665500125661322 309 Gene3D G3DSA:3.40.50.150 216 309 1.7E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS07500 34eb863b98dfc6190665500125661322 309 Gene3D G3DSA:3.40.50.150 5 109 1.7E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS07500 34eb863b98dfc6190665500125661322 309 Pfam PF01795 MraW methylase family 2 309 9.6E-131 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS07500 34eb863b98dfc6190665500125661322 309 SUPERFAMILY SSF81799 113 213 2.62E-37 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS07500 34eb863b98dfc6190665500125661322 309 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 308 6.7E-125 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS07500 34eb863b98dfc6190665500125661322 309 PANTHER PTHR11265 1 309 2.3E-151 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS07500 34eb863b98dfc6190665500125661322 309 Gene3D G3DSA:1.10.150.170 112 215 2.7E-40 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS07500 34eb863b98dfc6190665500125661322 309 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 309 39.634 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS18535 7aa0461201cb65ebeb20889ba5506762 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 257 266 7.3E-41 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18535 7aa0461201cb65ebeb20889ba5506762 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 206 223 7.3E-41 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18535 7aa0461201cb65ebeb20889ba5506762 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 135 149 7.3E-41 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18535 7aa0461201cb65ebeb20889ba5506762 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 235 246 7.3E-41 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18535 7aa0461201cb65ebeb20889ba5506762 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 169 187 7.3E-41 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18535 7aa0461201cb65ebeb20889ba5506762 289 SUPERFAMILY SSF52096 34 287 1.81E-80 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS18535 7aa0461201cb65ebeb20889ba5506762 289 Gene3D G3DSA:3.90.226.10 29 287 4.4E-80 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS18535 7aa0461201cb65ebeb20889ba5506762 289 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 20 287 5.5E-123 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18535 7aa0461201cb65ebeb20889ba5506762 289 PANTHER PTHR22855 23 288 1.1E-153 T 23-04-2016 CLI_RS18535 7aa0461201cb65ebeb20889ba5506762 289 Pfam PF01039 Carboxyl transferase domain 70 248 7.0E-22 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18535 7aa0461201cb65ebeb20889ba5506762 289 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 287 40.183 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CLI_RS18535 7aa0461201cb65ebeb20889ba5506762 289 PANTHER PTHR22855:SF17 23 288 1.1E-153 T 23-04-2016 CLI_RS00210 238941abb571c200a7db002e411edf4e 162 Pfam PF00293 NUDIX domain 43 148 1.6E-15 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CLI_RS00210 238941abb571c200a7db002e411edf4e 162 PANTHER PTHR22769 2 161 1.4E-52 T 23-04-2016 CLI_RS00210 238941abb571c200a7db002e411edf4e 162 Gene3D G3DSA:3.90.79.10 2 150 2.1E-26 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLI_RS00210 238941abb571c200a7db002e411edf4e 162 PANTHER PTHR22769:SF14 2 161 1.4E-52 T 23-04-2016 CLI_RS00210 238941abb571c200a7db002e411edf4e 162 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CLI_RS00210 238941abb571c200a7db002e411edf4e 162 SUPERFAMILY SSF55811 4 160 3.93E-29 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLI_RS15695 58d3346515e8afbbbf11175eb7949cd7 246 PANTHER PTHR10108 181 243 1.3E-77 T 23-04-2016 CLI_RS15695 58d3346515e8afbbbf11175eb7949cd7 246 PANTHER PTHR10108 4 151 1.3E-77 T 23-04-2016 CLI_RS15695 58d3346515e8afbbbf11175eb7949cd7 246 SUPERFAMILY SSF53335 2 246 4.74E-51 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS15695 58d3346515e8afbbbf11175eb7949cd7 246 Pfam PF13649 Methyltransferase domain 43 137 8.3E-17 T 23-04-2016 CLI_RS15695 58d3346515e8afbbbf11175eb7949cd7 246 PANTHER PTHR10108:SF928 181 243 1.3E-77 T 23-04-2016 CLI_RS15695 58d3346515e8afbbbf11175eb7949cd7 246 PANTHER PTHR10108:SF928 4 151 1.3E-77 T 23-04-2016 CLI_RS15695 58d3346515e8afbbbf11175eb7949cd7 246 Gene3D G3DSA:3.40.50.150 3 246 1.3E-34 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS15445 4c0f9187d31c4b99eb9ba44ec483119b 352 PANTHER PTHR18964:SF70 1 351 1.4E-167 T 23-04-2016 CLI_RS15445 4c0f9187d31c4b99eb9ba44ec483119b 352 Gene3D G3DSA:3.40.50.2000 197 349 6.3E-55 T 23-04-2016 CLI_RS15445 4c0f9187d31c4b99eb9ba44ec483119b 352 PANTHER PTHR18964 1 351 1.4E-167 T 23-04-2016 CLI_RS15445 4c0f9187d31c4b99eb9ba44ec483119b 352 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 26 348 3.8E-118 T 23-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CLI_RS15445 4c0f9187d31c4b99eb9ba44ec483119b 352 Gene3D G3DSA:3.40.50.2000 1 196 4.8E-80 T 23-04-2016 CLI_RS15445 4c0f9187d31c4b99eb9ba44ec483119b 352 SUPERFAMILY SSF53756 1 350 7.53E-112 T 23-04-2016 CLI_RS15445 4c0f9187d31c4b99eb9ba44ec483119b 352 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 350 1.9E-103 T 23-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 CLI_RS06725 ad6dc7aa0ad98352f8019356662d335c 420 PANTHER PTHR10859:SF37 36 358 1.5E-114 T 23-04-2016 CLI_RS06725 ad6dc7aa0ad98352f8019356662d335c 420 PANTHER PTHR10859 36 358 1.5E-114 T 23-04-2016 CLI_RS06725 ad6dc7aa0ad98352f8019356662d335c 420 SUPERFAMILY SSF53448 51 321 6.1E-64 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS06725 ad6dc7aa0ad98352f8019356662d335c 420 Gene3D G3DSA:3.90.550.10 53 301 3.7E-48 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS06725 ad6dc7aa0ad98352f8019356662d335c 420 Pfam PF13641 Glycosyltransferase like family 2 53 283 3.1E-37 T 23-04-2016 CLI_RS02540 9ecc8f8a54bc40fae682c01b931303aa 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS02540 9ecc8f8a54bc40fae682c01b931303aa 233 PANTHER PTHR24220 3 232 3.4E-119 T 23-04-2016 CLI_RS02540 9ecc8f8a54bc40fae682c01b931303aa 233 SMART SM00382 26 212 9.6E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS02540 9ecc8f8a54bc40fae682c01b931303aa 233 SUPERFAMILY SSF52540 2 227 5.33E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02540 9ecc8f8a54bc40fae682c01b931303aa 233 Gene3D G3DSA:3.40.50.300 1 224 3.6E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02540 9ecc8f8a54bc40fae682c01b931303aa 233 Pfam PF00005 ABC transporter 17 161 1.5E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS02540 9ecc8f8a54bc40fae682c01b931303aa 233 PANTHER PTHR24220:SF568 3 232 3.4E-119 T 23-04-2016 CLI_RS02050 8ed89b71f9f747e622ab1f51717f45d4 310 Pfam PF03116 NQR2, RnfD, RnfE family 8 307 8.2E-125 T 23-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CLI_RS02050 8ed89b71f9f747e622ab1f51717f45d4 310 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 6 309 26.364 T 23-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CLI_RS02050 8ed89b71f9f747e622ab1f51717f45d4 310 PANTHER PTHR30578:SF0 1 310 3.6E-132 T 23-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CLI_RS02050 8ed89b71f9f747e622ab1f51717f45d4 310 PANTHER PTHR30578 1 310 3.6E-132 T 23-04-2016 CLI_RS02050 8ed89b71f9f747e622ab1f51717f45d4 310 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 11 308 1.5E-108 T 23-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 PANTHER PTHR11751:SF382 5 75 1.0E-42 T 23-04-2016 CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 PANTHER PTHR11751:SF382 91 114 1.0E-42 T 23-04-2016 CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 SUPERFAMILY SSF46785 1 76 3.55E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.1E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 SUPERFAMILY SSF48008 97 228 5.75E-21 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 Gene3D G3DSA:1.10.10.10 5 75 9.2E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 Pfam PF07729 FCD domain 98 222 6.6E-21 T 23-04-2016 IPR011711 GntR, C-terminal CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 SMART SM00895 98 223 1.9E-16 T 23-04-2016 IPR011711 GntR, C-terminal CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 PANTHER PTHR11751 5 75 1.0E-42 T 23-04-2016 CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 PANTHER PTHR11751 91 114 1.0E-42 T 23-04-2016 CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 SMART SM00345 14 73 4.8E-23 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.2E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.2E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS07810 f5e995d861a84f43970fe5dc9c8b7047 236 Gene3D G3DSA:1.20.120.530 95 232 3.1E-22 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal CLI_RS07005 123d6f8d952187c626093ebba3ea0423 425 SUPERFAMILY SSF54862 279 363 1.23E-20 T 23-04-2016 CLI_RS07005 123d6f8d952187c626093ebba3ea0423 425 Pfam PF12838 4Fe-4S dicluster domain 293 345 3.7E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS07005 123d6f8d952187c626093ebba3ea0423 425 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 294 305 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS07005 123d6f8d952187c626093ebba3ea0423 425 PRINTS PR01868 ABC transporter family E signature 299 314 3.0E-5 T 23-04-2016 IPR013283 ABC transporter ABCE CLI_RS07005 123d6f8d952187c626093ebba3ea0423 425 PRINTS PR01868 ABC transporter family E signature 328 352 3.0E-5 T 23-04-2016 IPR013283 ABC transporter ABCE CLI_RS07005 123d6f8d952187c626093ebba3ea0423 425 Gene3D G3DSA:3.30.70.20 302 354 6.4E-18 T 23-04-2016 CLI_RS07005 123d6f8d952187c626093ebba3ea0423 425 PANTHER PTHR24960:SF20 131 357 6.8E-55 T 23-04-2016 CLI_RS07005 123d6f8d952187c626093ebba3ea0423 425 PANTHER PTHR24960 131 357 6.8E-55 T 23-04-2016 CLI_RS07005 123d6f8d952187c626093ebba3ea0423 425 Gene3D G3DSA:3.30.70.20 258 301 1.4E-5 T 23-04-2016 CLI_RS17170 7366a3dc25dfe1c5eec5716d80877032 331 Gene3D G3DSA:2.120.10.70 301 330 3.1E-6 T 23-04-2016 CLI_RS17170 7366a3dc25dfe1c5eec5716d80877032 331 Gene3D G3DSA:2.120.10.70 42 300 9.4E-85 T 23-04-2016 CLI_RS17170 7366a3dc25dfe1c5eec5716d80877032 331 Pfam PF03984 Repeat of unknown function (DUF346) 136 171 1.4E-7 T 23-04-2016 IPR007132 Protein of unknown function DUF346 CLI_RS17170 7366a3dc25dfe1c5eec5716d80877032 331 Pfam PF03984 Repeat of unknown function (DUF346) 226 260 4.5E-8 T 23-04-2016 IPR007132 Protein of unknown function DUF346 CLI_RS17170 7366a3dc25dfe1c5eec5716d80877032 331 Pfam PF03984 Repeat of unknown function (DUF346) 182 216 9.7E-7 T 23-04-2016 IPR007132 Protein of unknown function DUF346 CLI_RS17170 7366a3dc25dfe1c5eec5716d80877032 331 SUPERFAMILY SSF89372 61 169 1.44E-25 T 23-04-2016 CLI_RS17170 7366a3dc25dfe1c5eec5716d80877032 331 SUPERFAMILY SSF89372 155 330 1.15E-42 T 23-04-2016 CLI_RS13830 52218c3837be68c8be6da69734341535 688 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 267 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLI_RS13830 52218c3837be68c8be6da69734341535 688 SUPERFAMILY SSF51445 331 551 8.0E-13 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS13830 52218c3837be68c8be6da69734341535 688 PANTHER PTHR11019 16 279 7.8E-74 T 23-04-2016 CLI_RS13830 52218c3837be68c8be6da69734341535 688 SUPERFAMILY SSF46689 225 275 1.39E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS13830 52218c3837be68c8be6da69734341535 688 SUPERFAMILY SSF51011 539 687 3.24E-22 T 23-04-2016 CLI_RS13830 52218c3837be68c8be6da69734341535 688 SMART SM00342 188 271 6.5E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS13830 52218c3837be68c8be6da69734341535 688 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 1.7E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS13830 52218c3837be68c8be6da69734341535 688 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 1.7E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS13830 52218c3837be68c8be6da69734341535 688 Pfam PF07883 Cupin domain 23 75 6.6E-7 T 23-04-2016 IPR013096 Cupin 2, conserved barrel CLI_RS13830 52218c3837be68c8be6da69734341535 688 PANTHER PTHR11019:SF141 16 279 7.8E-74 T 23-04-2016 CLI_RS13830 52218c3837be68c8be6da69734341535 688 SUPERFAMILY SSF51182 23 98 1.67E-10 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS13830 52218c3837be68c8be6da69734341535 688 Gene3D G3DSA:2.60.40.1500 545 685 2.4E-26 T 23-04-2016 CLI_RS13830 52218c3837be68c8be6da69734341535 688 Gene3D G3DSA:3.20.20.80 332 450 1.1E-5 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS13830 52218c3837be68c8be6da69734341535 688 Gene3D G3DSA:3.20.20.80 471 544 2.7E-6 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS13830 52218c3837be68c8be6da69734341535 688 Gene3D G3DSA:1.10.10.60 226 276 3.7E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS13830 52218c3837be68c8be6da69734341535 688 Pfam PF01229 Glycosyl hydrolases family 39 481 659 4.2E-9 T 23-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 CLI_RS13830 52218c3837be68c8be6da69734341535 688 Gene3D G3DSA:1.10.10.60 172 225 3.0E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS13830 52218c3837be68c8be6da69734341535 688 Pfam PF12833 Helix-turn-helix domain 195 272 6.0E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS13830 52218c3837be68c8be6da69734341535 688 Gene3D G3DSA:2.60.120.10 23 95 5.7E-29 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS04490 1e4e6cf24f26db4f3523c726da9247d2 217 Gene3D G3DSA:2.160.20.10 54 169 7.3E-7 T 23-04-2016 IPR012334 Pectin lyase fold CLI_RS04490 1e4e6cf24f26db4f3523c726da9247d2 217 Pfam PF13599 Pentapeptide repeats (9 copies) 92 164 4.0E-10 T 23-04-2016 IPR001646 Pentapeptide repeat CLI_RS04490 1e4e6cf24f26db4f3523c726da9247d2 217 PANTHER PTHR14136 10 216 3.5E-97 T 23-04-2016 CLI_RS04490 1e4e6cf24f26db4f3523c726da9247d2 217 SUPERFAMILY SSF141571 36 215 5.49E-39 T 23-04-2016 CLI_RS04490 1e4e6cf24f26db4f3523c726da9247d2 217 PANTHER PTHR14136:SF13 10 216 3.5E-97 T 23-04-2016 CLI_RS17830 55a25d8909c1ccc44967dcc2754d2b83 97 ProSitePatterns PS00050 Ribosomal protein L23 signature. 78 93 - T 23-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site CLI_RS17830 55a25d8909c1ccc44967dcc2754d2b83 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 6 96 21.941 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CLI_RS17830 55a25d8909c1ccc44967dcc2754d2b83 97 PANTHER PTHR11620 2 94 1.1E-30 T 23-04-2016 CLI_RS17830 55a25d8909c1ccc44967dcc2754d2b83 97 Pfam PF00276 Ribosomal protein L23 7 90 1.2E-30 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CLI_RS17830 55a25d8909c1ccc44967dcc2754d2b83 97 SUPERFAMILY SSF54189 6 96 4.68E-32 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17830 55a25d8909c1ccc44967dcc2754d2b83 97 Gene3D G3DSA:3.30.70.330 4 96 3.9E-34 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 CLI_RS10145 852b222b0a31a7976063979d3709532b 181 PANTHER PTHR11776:SF10 12 178 2.6E-72 T 23-04-2016 CLI_RS10145 852b222b0a31a7976063979d3709532b 181 Gene3D G3DSA:3.40.50.2020 6 168 7.3E-30 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS10145 852b222b0a31a7976063979d3709532b 181 PANTHER PTHR11776 12 178 2.6E-72 T 23-04-2016 CLI_RS10145 852b222b0a31a7976063979d3709532b 181 SUPERFAMILY SSF53271 14 167 4.47E-21 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS10145 852b222b0a31a7976063979d3709532b 181 Pfam PF00156 Phosphoribosyl transferase domain 51 159 4.1E-12 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS08680 f8f0a1d96d6f7fd066294308149f5125 481 Pfam PF00271 Helicase conserved C-terminal domain 229 337 9.1E-32 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS08680 f8f0a1d96d6f7fd066294308149f5125 481 Pfam PF03880 DbpA RNA binding domain 408 477 1.4E-22 T 23-04-2016 IPR005580 DbpA, RNA-binding domain CLI_RS08680 f8f0a1d96d6f7fd066294308149f5125 481 SUPERFAMILY SSF52540 72 358 5.55E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08680 f8f0a1d96d6f7fd066294308149f5125 481 Gene3D G3DSA:3.40.50.300 4 209 3.2E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08680 f8f0a1d96d6f7fd066294308149f5125 481 SMART SM00490 256 337 1.5E-34 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS08680 f8f0a1d96d6f7fd066294308149f5125 481 Gene3D G3DSA:3.40.50.300 210 369 4.7E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08680 f8f0a1d96d6f7fd066294308149f5125 481 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLI_RS08680 f8f0a1d96d6f7fd066294308149f5125 481 SMART SM00487 23 215 4.5E-61 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS08680 f8f0a1d96d6f7fd066294308149f5125 481 PANTHER PTHR24031 5 393 3.9E-176 T 23-04-2016 CLI_RS08680 f8f0a1d96d6f7fd066294308149f5125 481 PANTHER PTHR24031:SF261 5 393 3.9E-176 T 23-04-2016 CLI_RS08680 f8f0a1d96d6f7fd066294308149f5125 481 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 480 68.782 T 23-04-2016 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 CLI_RS08680 f8f0a1d96d6f7fd066294308149f5125 481 Pfam PF00270 DEAD/DEAH box helicase 29 193 8.0E-50 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLI_RS08040 e5228b940f2949789b294d291375ca19 303 Pfam PF00294 pfkB family carbohydrate kinase 2 294 1.3E-67 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB CLI_RS08040 e5228b940f2949789b294d291375ca19 303 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 299 6.8E-117 T 23-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 CLI_RS08040 e5228b940f2949789b294d291375ca19 303 PANTHER PTHR10584 1 303 3.9E-116 T 23-04-2016 CLI_RS08040 e5228b940f2949789b294d291375ca19 303 PRINTS PR00990 Ribokinase signature 5 26 5.97E-30 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 CLI_RS08040 e5228b940f2949789b294d291375ca19 303 PRINTS PR00990 Ribokinase signature 32 51 5.97E-30 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 CLI_RS08040 e5228b940f2949789b294d291375ca19 303 PRINTS PR00990 Ribokinase signature 173 188 5.97E-30 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 CLI_RS08040 e5228b940f2949789b294d291375ca19 303 PRINTS PR00990 Ribokinase signature 104 117 5.97E-30 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 CLI_RS08040 e5228b940f2949789b294d291375ca19 303 PRINTS PR00990 Ribokinase signature 217 228 5.97E-30 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 CLI_RS08040 e5228b940f2949789b294d291375ca19 303 SUPERFAMILY SSF53613 1 302 1.71E-82 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS08040 e5228b940f2949789b294d291375ca19 303 Gene3D G3DSA:3.40.1190.20 1 303 1.8E-88 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS08040 e5228b940f2949789b294d291375ca19 303 PANTHER PTHR10584:SF184 1 303 3.9E-116 T 23-04-2016 CLI_RS07525 7c9f28eb44d3a545cfce29bf11872869 317 PANTHER PTHR22926 1 317 1.3E-143 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS07525 7c9f28eb44d3a545cfce29bf11872869 317 ProSitePatterns PS01348 MraY family signature 2. 164 175 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS07525 7c9f28eb44d3a545cfce29bf11872869 317 PANTHER PTHR22926:SF5 1 317 1.3E-143 T 23-04-2016 CLI_RS07525 7c9f28eb44d3a545cfce29bf11872869 317 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 16 316 2.6E-92 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS07525 7c9f28eb44d3a545cfce29bf11872869 317 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 317 21.538 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS07525 7c9f28eb44d3a545cfce29bf11872869 317 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 7.3E-6 T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS07525 7c9f28eb44d3a545cfce29bf11872869 317 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS07525 7c9f28eb44d3a545cfce29bf11872869 317 Pfam PF00953 Glycosyl transferase family 4 78 244 2.5E-32 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS09480 353639c0ba5e9a88df2e685edbd575ff 298 SUPERFAMILY SSF52317 21 291 1.11E-82 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS09480 353639c0ba5e9a88df2e685edbd575ff 298 Pfam PF04204 Homoserine O-succinyltransferase 3 289 1.9E-113 T 23-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 CLI_RS09480 353639c0ba5e9a88df2e685edbd575ff 298 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 49 288 1.0E-77 T 23-04-2016 CLI_RS09480 353639c0ba5e9a88df2e685edbd575ff 298 Gene3D G3DSA:3.40.50.880 34 291 1.8E-105 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS09480 353639c0ba5e9a88df2e685edbd575ff 298 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 289 1.1E-110 T 23-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 CLI_RS09480 353639c0ba5e9a88df2e685edbd575ff 298 PIRSF PIRSF000450 1 292 4.1E-117 T 23-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 CLI_RS09480 353639c0ba5e9a88df2e685edbd575ff 298 PANTHER PTHR20919 2 292 2.9E-153 T 23-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 CLI_RS09480 353639c0ba5e9a88df2e685edbd575ff 298 PANTHER PTHR20919:SF0 2 292 2.9E-153 T 23-04-2016 CLI_RS01130 e93051a2ce69e00b24af7bdd1d00ceb3 308 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 304 8.7E-107 T 23-04-2016 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS01130 e93051a2ce69e00b24af7bdd1d00ceb3 308 Gene3D G3DSA:3.20.20.70 1 306 7.5E-110 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS01130 e93051a2ce69e00b24af7bdd1d00ceb3 308 PIRSF PIRSF001359 1 307 6.9E-100 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLI_RS01130 e93051a2ce69e00b24af7bdd1d00ceb3 308 PANTHER PTHR30304 1 300 1.3E-118 T 23-04-2016 CLI_RS01130 e93051a2ce69e00b24af7bdd1d00ceb3 308 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 305 6.8E-101 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLI_RS01130 e93051a2ce69e00b24af7bdd1d00ceb3 308 SUPERFAMILY SSF51569 1 303 1.07E-103 T 23-04-2016 CLI_RS01130 e93051a2ce69e00b24af7bdd1d00ceb3 308 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 300 4.5E-88 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLI_RS10345 40d66b7f604a7b34320a93bae6397efc 214 Gene3D G3DSA:2.160.10.10 85 212 1.8E-30 T 23-04-2016 CLI_RS10345 40d66b7f604a7b34320a93bae6397efc 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 151 8.5E-5 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS10345 40d66b7f604a7b34320a93bae6397efc 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 163 194 2.7E-4 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS10345 40d66b7f604a7b34320a93bae6397efc 214 PANTHER PTHR23416 40 213 1.2E-42 T 23-04-2016 CLI_RS10345 40d66b7f604a7b34320a93bae6397efc 214 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 4 209 2.4E-66 T 23-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like CLI_RS10345 40d66b7f604a7b34320a93bae6397efc 214 SUPERFAMILY SSF51161 1 212 1.52E-39 T 23-04-2016 IPR011004 Trimeric LpxA-like CLI_RS10345 40d66b7f604a7b34320a93bae6397efc 214 PANTHER PTHR23416:SF23 40 213 1.2E-42 T 23-04-2016 CLI_RS10345 40d66b7f604a7b34320a93bae6397efc 214 Gene3D G3DSA:3.40.50.20 1 84 2.8E-10 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS01320 3fd182bef9be8c0d8acea6fa6bfd6e3b 77 Pfam PF03840 Preprotein translocase SecG subunit 6 74 8.4E-20 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CLI_RS01320 3fd182bef9be8c0d8acea6fa6bfd6e3b 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 75 1.5E-21 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CLI_RS03155 ea71fd0532df7a50c58fc88b0cc32f34 159 Gene3D G3DSA:3.40.630.30 1 149 1.6E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03155 ea71fd0532df7a50c58fc88b0cc32f34 159 SUPERFAMILY SSF55729 1 151 2.48E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS10040 478530dcf4c974a97633e806a1777e41 476 PANTHER PTHR32507 2 464 1.5E-200 T 23-04-2016 CLI_RS10040 478530dcf4c974a97633e806a1777e41 476 Pfam PF00999 Sodium/hydrogen exchanger family 6 380 1.7E-46 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CLI_RS10040 478530dcf4c974a97633e806a1777e41 476 PANTHER PTHR32507:SF7 2 464 1.5E-200 T 23-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 CLI_RS10040 478530dcf4c974a97633e806a1777e41 476 SUPERFAMILY SSF116726 402 463 5.75E-13 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS10040 478530dcf4c974a97633e806a1777e41 476 Gene3D G3DSA:3.30.70.1450 404 463 2.3E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS10040 478530dcf4c974a97633e806a1777e41 476 Pfam PF02080 TrkA-C domain 406 464 4.3E-14 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS03495 c4ee4051b4e6c205f57a9d938e0ee528 613 PANTHER PTHR30175:SF9 1 563 0.0 T 23-04-2016 CLI_RS03495 c4ee4051b4e6c205f57a9d938e0ee528 613 Gene3D G3DSA:2.70.70.10 462 612 4.3E-56 T 23-04-2016 CLI_RS03495 c4ee4051b4e6c205f57a9d938e0ee528 613 Gene3D G3DSA:3.30.1360.60 1 81 2.7E-28 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS03495 c4ee4051b4e6c205f57a9d938e0ee528 613 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 613 6.7E-237 T 23-04-2016 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS03495 c4ee4051b4e6c205f57a9d938e0ee528 613 Pfam PF00367 phosphotransferase system, EIIB 9 41 1.7E-14 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS03495 c4ee4051b4e6c205f57a9d938e0ee528 613 PANTHER PTHR30175 1 563 0.0 T 23-04-2016 CLI_RS03495 c4ee4051b4e6c205f57a9d938e0ee528 613 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 469 588 2.8E-41 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS03495 c4ee4051b4e6c205f57a9d938e0ee528 613 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 468 592 1.2E-47 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS03495 c4ee4051b4e6c205f57a9d938e0ee528 613 Pfam PF02378 Phosphotransferase system, EIIC 108 385 8.9E-33 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS03495 c4ee4051b4e6c205f57a9d938e0ee528 613 SUPERFAMILY SSF55604 6 80 1.29E-21 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS03495 c4ee4051b4e6c205f57a9d938e0ee528 613 SUPERFAMILY SSF51261 467 611 5.41E-50 T 23-04-2016 IPR011055 Duplicated hybrid motif CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 Pfam PF00512 His Kinase A (phospho-acceptor) domain 86 145 2.6E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 SUPERFAMILY SSF55874 152 286 7.99E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 SMART SM00388 81 147 4.9E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 Gene3D G3DSA:1.10.287.130 75 142 3.1E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 SMART SM00387 193 300 5.3E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 Gene3D G3DSA:3.30.565.10 151 286 6.7E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 194 285 2.7E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 PANTHER PTHR24423 2 40 2.4E-48 T 23-04-2016 CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 PANTHER PTHR24423 77 286 2.4E-48 T 23-04-2016 CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 PRINTS PR01780 Lantibiotic regulatory protein signature 90 106 7.3E-6 T 23-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 PRINTS PR01780 Lantibiotic regulatory protein signature 189 204 7.3E-6 T 23-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 PRINTS PR01780 Lantibiotic regulatory protein signature 251 266 7.3E-6 T 23-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLI_RS04160 d1c11fe1f5c1462a21198d79acbcc072 301 SUPERFAMILY SSF47384 72 145 1.88E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS14120 5011fcc8c5d82dc4944db40ac44906e0 159 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 73 85 - T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS14120 5011fcc8c5d82dc4944db40ac44906e0 159 Gene3D G3DSA:2.70.70.10 6 154 2.3E-58 T 23-04-2016 CLI_RS14120 5011fcc8c5d82dc4944db40ac44906e0 159 PANTHER PTHR30175 10 106 1.5E-43 T 23-04-2016 CLI_RS14120 5011fcc8c5d82dc4944db40ac44906e0 159 SUPERFAMILY SSF51261 4 154 1.08E-54 T 23-04-2016 IPR011055 Duplicated hybrid motif CLI_RS14120 5011fcc8c5d82dc4944db40ac44906e0 159 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 11 131 6.1E-45 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS14120 5011fcc8c5d82dc4944db40ac44906e0 159 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 10 134 1.9E-50 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS05120 ada0b2c1628607fefe297df1ff391c75 340 Pfam PF01497 Periplasmic binding protein 76 311 1.2E-27 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CLI_RS05120 ada0b2c1628607fefe297df1ff391c75 340 Gene3D G3DSA:3.40.50.1980 201 339 1.8E-31 T 23-04-2016 CLI_RS05120 ada0b2c1628607fefe297df1ff391c75 340 PANTHER PTHR30535:SF14 63 337 1.8E-168 T 23-04-2016 CLI_RS05120 ada0b2c1628607fefe297df1ff391c75 340 Gene3D G3DSA:3.40.50.1980 70 198 1.6E-9 T 23-04-2016 CLI_RS05120 ada0b2c1628607fefe297df1ff391c75 340 SUPERFAMILY SSF53807 63 340 2.9E-45 T 23-04-2016 CLI_RS05120 ada0b2c1628607fefe297df1ff391c75 340 PANTHER PTHR30535 63 337 1.8E-168 T 23-04-2016 CLI_RS05765 0c78833955d0a86f8e85b06778f92a1d 456 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 209 216 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CLI_RS05765 0c78833955d0a86f8e85b06778f92a1d 456 Pfam PF00171 Aldehyde dehydrogenase family 9 428 2.3E-81 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CLI_RS05765 0c78833955d0a86f8e85b06778f92a1d 456 PANTHER PTHR11699:SF119 1 444 3.5E-175 T 23-04-2016 CLI_RS05765 0c78833955d0a86f8e85b06778f92a1d 456 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 237 248 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CLI_RS05765 0c78833955d0a86f8e85b06778f92a1d 456 Gene3D G3DSA:3.40.309.10 225 408 6.1E-64 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLI_RS05765 0c78833955d0a86f8e85b06778f92a1d 456 SUPERFAMILY SSF53720 4 437 5.37E-117 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CLI_RS05765 0c78833955d0a86f8e85b06778f92a1d 456 Gene3D G3DSA:3.40.605.10 3 224 4.6E-51 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CLI_RS05765 0c78833955d0a86f8e85b06778f92a1d 456 PIRSF PIRSF036492 1 456 4.5E-189 T 23-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 CLI_RS05765 0c78833955d0a86f8e85b06778f92a1d 456 PANTHER PTHR11699 1 444 3.5E-175 T 23-04-2016 CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 Gene3D G3DSA:3.30.70.20 151 217 4.5E-17 T 23-04-2016 CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 197 208 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 93 283 4.2E-29 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 SUPERFAMILY SSF55124 6 98 4.09E-20 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 20 82 7.6E-15 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 SUPERFAMILY SSF56014 91 162 3.27E-37 T 23-04-2016 CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 SUPERFAMILY SSF56014 218 283 3.27E-37 T 23-04-2016 CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 Pfam PF00037 4Fe-4S binding domain 191 212 6.1E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 139 155 - T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 Gene3D G3DSA:3.30.413.10 218 283 5.6E-36 T 23-04-2016 CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 Gene3D G3DSA:3.30.413.10 94 150 5.6E-36 T 23-04-2016 CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 PANTHER PTHR11493 212 284 5.2E-51 T 23-04-2016 CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 PANTHER PTHR11493 7 158 5.2E-51 T 23-04-2016 CLI_RS08660 cb38ec4b1bb4f0370d2b98c8e138713d 284 SUPERFAMILY SSF54862 161 217 3.26E-17 T 23-04-2016 CLI_RS14550 4dd3c1e02a47a7ed5e941b1b5ed42bc8 225 PANTHER PTHR24567:SF38 1 224 5.9E-101 T 23-04-2016 CLI_RS14550 4dd3c1e02a47a7ed5e941b1b5ed42bc8 225 Pfam PF13545 Crp-like helix-turn-helix domain 154 223 1.9E-13 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS14550 4dd3c1e02a47a7ed5e941b1b5ed42bc8 225 SUPERFAMILY SSF46785 152 223 3.93E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14550 4dd3c1e02a47a7ed5e941b1b5ed42bc8 225 Gene3D G3DSA:1.10.10.10 152 223 2.5E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14550 4dd3c1e02a47a7ed5e941b1b5ed42bc8 225 SMART SM00100 13 148 2.2E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CLI_RS14550 4dd3c1e02a47a7ed5e941b1b5ed42bc8 225 SUPERFAMILY SSF51206 1 147 1.17E-32 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CLI_RS14550 4dd3c1e02a47a7ed5e941b1b5ed42bc8 225 PANTHER PTHR24567 1 224 5.9E-101 T 23-04-2016 CLI_RS14550 4dd3c1e02a47a7ed5e941b1b5ed42bc8 225 Pfam PF00027 Cyclic nucleotide-binding domain 34 120 3.1E-14 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CLI_RS14550 4dd3c1e02a47a7ed5e941b1b5ed42bc8 225 Gene3D G3DSA:2.60.120.10 8 149 3.7E-34 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS04015 d93f21be8c984b34a055870c55fe4ed1 581 PANTHER PTHR10803:SF0 6 368 6.3E-112 T 23-04-2016 CLI_RS04015 d93f21be8c984b34a055870c55fe4ed1 581 Pfam PF02374 Anion-transporting ATPase 475 573 8.9E-7 T 23-04-2016 IPR025723 Anion-transporting ATPase-like domain CLI_RS04015 d93f21be8c984b34a055870c55fe4ed1 581 Pfam PF02374 Anion-transporting ATPase 13 294 2.5E-78 T 23-04-2016 IPR025723 Anion-transporting ATPase-like domain CLI_RS04015 d93f21be8c984b34a055870c55fe4ed1 581 Pfam PF02374 Anion-transporting ATPase 327 468 1.2E-31 T 23-04-2016 IPR025723 Anion-transporting ATPase-like domain CLI_RS04015 d93f21be8c984b34a055870c55fe4ed1 581 PANTHER PTHR10803 6 368 6.3E-112 T 23-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 CLI_RS04015 d93f21be8c984b34a055870c55fe4ed1 581 SUPERFAMILY SSF52540 14 292 2.02E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04015 d93f21be8c984b34a055870c55fe4ed1 581 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 17 294 1.8E-77 T 23-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 CLI_RS04015 d93f21be8c984b34a055870c55fe4ed1 581 PIRSF PIRSF001327 2 581 2.6E-271 T 23-04-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 CLI_RS04015 d93f21be8c984b34a055870c55fe4ed1 581 SUPERFAMILY SSF52540 312 544 1.38E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04015 d93f21be8c984b34a055870c55fe4ed1 581 Gene3D G3DSA:3.40.50.300 312 574 3.3E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04015 d93f21be8c984b34a055870c55fe4ed1 581 Gene3D G3DSA:3.40.50.300 13 288 5.3E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04015 d93f21be8c984b34a055870c55fe4ed1 581 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 12 569 8.2E-259 T 23-04-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 CLI_RS05780 02e6cf153e0357b9e7162e6c804cb251 145 PANTHER PTHR18964:SF122 8 138 6.7E-29 T 23-04-2016 CLI_RS05780 02e6cf153e0357b9e7162e6c804cb251 145 PANTHER PTHR18964 8 138 6.7E-29 T 23-04-2016 CLI_RS05780 02e6cf153e0357b9e7162e6c804cb251 145 SMART SM00347 25 125 6.0E-19 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS05780 02e6cf153e0357b9e7162e6c804cb251 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 98 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site CLI_RS05780 02e6cf153e0357b9e7162e6c804cb251 145 SUPERFAMILY SSF46785 7 134 8.86E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05780 02e6cf153e0357b9e7162e6c804cb251 145 Gene3D G3DSA:1.10.10.10 5 135 7.3E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05780 02e6cf153e0357b9e7162e6c804cb251 145 Pfam PF01047 MarR family 38 89 8.4E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS05780 02e6cf153e0357b9e7162e6c804cb251 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 3.1E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS05780 02e6cf153e0357b9e7162e6c804cb251 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 3.1E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS05780 02e6cf153e0357b9e7162e6c804cb251 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 3.1E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS05780 02e6cf153e0357b9e7162e6c804cb251 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 3.1E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 SMART SM01209 101 293 7.6E-116 T 23-04-2016 CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 Gene3D G3DSA:3.30.1490.20 119 188 6.3E-25 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 413 39.678 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 3.2E-33 T 23-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 2.6E-72 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 413 2.0E-25 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 SUPERFAMILY SSF51246 327 412 2.98E-25 T 23-04-2016 IPR011054 Rudiment single hybrid motif CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 Gene3D G3DSA:3.30.470.20 189 325 3.7E-52 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 SUPERFAMILY SSF52440 1 101 4.46E-34 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 SUPERFAMILY SSF56059 102 318 3.36E-52 T 23-04-2016 CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 PANTHER PTHR10520 1 412 2.7E-236 T 23-04-2016 CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 Gene3D G3DSA:3.40.50.20 2 92 6.2E-35 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 412 5.3E-155 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 Gene3D G3DSA:3.90.600.10 328 412 4.5E-27 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CLI_RS14310 d1700c8df662e9ccd2ad15e6c358de95 413 SMART SM01210 327 412 5.1E-34 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 PANTHER PTHR30511:SF0 3 381 1.2E-178 T 23-04-2016 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 35 45 - T 23-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 Hamap MF_01201 Alanine racemase. 5 376 32.889 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 Gene3D G3DSA:3.20.20.10 14 225 2.0E-71 T 23-04-2016 IPR029066 PLP-binding barrel CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 Gene3D G3DSA:2.40.37.10 226 384 6.1E-58 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 Pfam PF01168 Alanine racemase, N-terminal domain 12 232 7.2E-64 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 Pfam PF00842 Alanine racemase, C-terminal domain 246 375 1.1E-39 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 PANTHER PTHR30511 3 381 1.2E-178 T 23-04-2016 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 SUPERFAMILY SSF51419 12 247 1.83E-64 T 23-04-2016 IPR029066 PLP-binding barrel CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 TIGRFAM TIGR00492 alr: alanine racemase 6 376 2.8E-113 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 SMART SM01005 246 376 1.4E-64 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 SUPERFAMILY SSF50621 239 384 1.85E-48 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 PRINTS PR00992 Alanine racemase signature 66 84 7.3E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 PRINTS PR00992 Alanine racemase signature 300 317 7.3E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 PRINTS PR00992 Alanine racemase signature 205 232 7.3E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 PRINTS PR00992 Alanine racemase signature 30 46 7.3E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 PRINTS PR00992 Alanine racemase signature 358 371 7.3E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 PRINTS PR00992 Alanine racemase signature 127 139 7.3E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 PRINTS PR00992 Alanine racemase signature 162 173 7.3E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 PRINTS PR00992 Alanine racemase signature 279 294 7.3E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS08490 b4bee98359f2d1aaf770480ba817fedd 389 PRINTS PR00992 Alanine racemase signature 262 277 7.3E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS15300 775b787fda9403fb7b0ba36abfc6e8a8 197 SUPERFAMILY SSF47781 65 132 1.0E-18 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CLI_RS15300 775b787fda9403fb7b0ba36abfc6e8a8 197 Pfam PF07499 RuvA, C-terminal domain 156 196 1.8E-14 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CLI_RS15300 775b787fda9403fb7b0ba36abfc6e8a8 197 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 3 196 5.1E-43 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CLI_RS15300 775b787fda9403fb7b0ba36abfc6e8a8 197 PANTHER PTHR33796 2 197 2.0E-71 T 23-04-2016 CLI_RS15300 775b787fda9403fb7b0ba36abfc6e8a8 197 Pfam PF01330 RuvA N terminal domain 2 62 1.1E-15 T 23-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CLI_RS15300 775b787fda9403fb7b0ba36abfc6e8a8 197 Gene3D G3DSA:1.10.150.20 67 132 1.4E-25 T 23-04-2016 CLI_RS15300 775b787fda9403fb7b0ba36abfc6e8a8 197 SUPERFAMILY SSF50249 2 63 7.42E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15300 775b787fda9403fb7b0ba36abfc6e8a8 197 Gene3D G3DSA:1.10.8.10 156 196 8.9E-15 T 23-04-2016 CLI_RS15300 775b787fda9403fb7b0ba36abfc6e8a8 197 Pfam PF14520 Helix-hairpin-helix domain 72 130 9.4E-17 T 23-04-2016 CLI_RS15300 775b787fda9403fb7b0ba36abfc6e8a8 197 SUPERFAMILY SSF46929 153 196 1.57E-9 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CLI_RS15300 775b787fda9403fb7b0ba36abfc6e8a8 197 Gene3D G3DSA:2.40.50.140 2 66 1.1E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15300 775b787fda9403fb7b0ba36abfc6e8a8 197 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 196 29.651 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CLI_RS18450 14443417661e714bbd432435bbb48a22 428 Gene3D G3DSA:2.40.50.100 13 55 6.4E-6 T 23-04-2016 CLI_RS18450 14443417661e714bbd432435bbb48a22 428 PANTHER PTHR11780 7 307 3.3E-83 T 23-04-2016 CLI_RS18450 14443417661e714bbd432435bbb48a22 428 SUPERFAMILY SSF51230 12 56 4.19E-5 T 23-04-2016 IPR011053 Single hybrid motif CLI_RS18450 14443417661e714bbd432435bbb48a22 428 TIGRFAM TIGR04481 PR_assoc_PrdC: proline reductase-associated electron transfer protein PrdC 6 428 5.1E-210 T 23-04-2016 IPR031001 Proline reductase-associated electron transfer protein PrdC CLI_RS18450 14443417661e714bbd432435bbb48a22 428 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 84 226 9.0E-37 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CLI_RS18450 14443417661e714bbd432435bbb48a22 428 PANTHER PTHR11780:SF1 7 307 3.3E-83 T 23-04-2016 CLI_RS18450 14443417661e714bbd432435bbb48a22 428 SUPERFAMILY SSF142984 240 307 6.02E-7 T 23-04-2016 CLI_RS18450 14443417661e714bbd432435bbb48a22 428 Pfam PF13375 RnfC Barrel sandwich hybrid domain 6 59 3.1E-14 T 23-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain CLI_RS18450 14443417661e714bbd432435bbb48a22 428 SUPERFAMILY SSF142019 42 244 3.79E-46 T 23-04-2016 CLI_RS12040 20d5c07e362b89faa4a68db1e049b159 306 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 303 5.2E-78 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CLI_RS12040 20d5c07e362b89faa4a68db1e049b159 306 Gene3D G3DSA:2.40.30.30 179 303 1.5E-42 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 CLI_RS12040 20d5c07e362b89faa4a68db1e049b159 306 Pfam PF01687 Riboflavin kinase 183 303 3.5E-36 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CLI_RS12040 20d5c07e362b89faa4a68db1e049b159 306 SUPERFAMILY SSF82114 172 303 2.01E-44 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CLI_RS12040 20d5c07e362b89faa4a68db1e049b159 306 Pfam PF06574 FAD synthetase 12 164 5.6E-43 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CLI_RS12040 20d5c07e362b89faa4a68db1e049b159 306 PIRSF PIRSF004491 1 305 1.1E-99 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CLI_RS12040 20d5c07e362b89faa4a68db1e049b159 306 SMART SM00904 182 306 2.2E-52 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CLI_RS12040 20d5c07e362b89faa4a68db1e049b159 306 PANTHER PTHR22749:SF0 2 303 2.9E-115 T 23-04-2016 CLI_RS12040 20d5c07e362b89faa4a68db1e049b159 306 SUPERFAMILY SSF52374 15 178 1.18E-25 T 23-04-2016 CLI_RS12040 20d5c07e362b89faa4a68db1e049b159 306 PANTHER PTHR22749 2 303 2.9E-115 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 CLI_RS12040 20d5c07e362b89faa4a68db1e049b159 306 Gene3D G3DSA:3.40.50.620 9 178 2.5E-49 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS10905 1537a0ca8bc9862b1df68742b4cab096 306 Gene3D G3DSA:3.10.310.10 132 292 2.0E-44 T 23-04-2016 CLI_RS10905 1537a0ca8bc9862b1df68742b4cab096 306 SUPERFAMILY SSF54506 4 301 1.15E-63 T 23-04-2016 CLI_RS10905 1537a0ca8bc9862b1df68742b4cab096 306 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 299 1.0E-72 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CLI_RS10905 1537a0ca8bc9862b1df68742b4cab096 306 PANTHER PTHR13774:SF15 1 304 1.5E-129 T 23-04-2016 CLI_RS10905 1537a0ca8bc9862b1df68742b4cab096 306 Pfam PF02567 Phenazine biosynthesis-like protein 9 296 8.8E-64 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CLI_RS10905 1537a0ca8bc9862b1df68742b4cab096 306 PANTHER PTHR13774 1 304 1.5E-129 T 23-04-2016 CLI_RS10905 1537a0ca8bc9862b1df68742b4cab096 306 PIRSF PIRSF016184 1 303 1.7E-81 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CLI_RS10905 1537a0ca8bc9862b1df68742b4cab096 306 Gene3D G3DSA:3.10.310.10 4 131 1.4E-39 T 23-04-2016 CLI_RS13685 dd15ec2072ff7d56f59f240eb538d99e 677 Pfam PF14804 Jag N-terminus 7 44 3.4E-9 T 23-04-2016 IPR032782 Jag, N-terminal CLI_RS13685 dd15ec2072ff7d56f59f240eb538d99e 677 SMART SM01245 5 54 7.4E-13 T 23-04-2016 IPR032782 Jag, N-terminal CLI_RS13685 dd15ec2072ff7d56f59f240eb538d99e 677 Pfam PF03961 Protein of unknown function (DUF342) 161 648 3.6E-90 T 23-04-2016 IPR005646 Protein of unknown function DUF342 CLI_RS13685 dd15ec2072ff7d56f59f240eb538d99e 677 Gene3D G3DSA:3.30.30.80 1 41 8.0E-9 T 23-04-2016 IPR032782 Jag, N-terminal CLI_RS13685 dd15ec2072ff7d56f59f240eb538d99e 677 PANTHER PTHR38032 14 664 6.0E-175 T 23-04-2016 CLI_RS16355 66fdeffb7bed68d665d3713bdfe320e7 181 PANTHER PTHR33746:SF5 48 181 2.3E-90 T 23-04-2016 CLI_RS16355 66fdeffb7bed68d665d3713bdfe320e7 181 SUPERFAMILY SSF57802 1 48 7.74E-12 T 23-04-2016 CLI_RS16355 66fdeffb7bed68d665d3713bdfe320e7 181 SUPERFAMILY SSF47240 55 180 9.14E-33 T 23-04-2016 IPR009078 Ferritin-like superfamily CLI_RS16355 66fdeffb7bed68d665d3713bdfe320e7 181 Gene3D G3DSA:2.20.28.10 1 37 8.3E-18 T 23-04-2016 IPR004039 Rubredoxin-type fold CLI_RS16355 66fdeffb7bed68d665d3713bdfe320e7 181 PANTHER PTHR33746 48 181 2.3E-90 T 23-04-2016 CLI_RS16355 66fdeffb7bed68d665d3713bdfe320e7 181 Pfam PF02915 Rubrerythrin 62 175 1.6E-14 T 23-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLI_RS16355 66fdeffb7bed68d665d3713bdfe320e7 181 Gene3D G3DSA:1.20.1260.10 56 179 1.1E-44 T 23-04-2016 IPR012347 Ferritin-related CLI_RS04200 9d734f5f26ed3b8243f974cadb9d2e63 213 SUPERFAMILY SSF100950 13 153 2.09E-5 T 23-04-2016 CLI_RS04200 9d734f5f26ed3b8243f974cadb9d2e63 213 Gene3D G3DSA:3.40.50.10420 10 153 1.1E-8 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CLI_RS04200 9d734f5f26ed3b8243f974cadb9d2e63 213 PANTHER PTHR36179:SF2 1 213 1.2E-112 T 23-04-2016 CLI_RS04200 9d734f5f26ed3b8243f974cadb9d2e63 213 PIRSF PIRSF020269 1 213 1.5E-88 T 23-04-2016 IPR009501 Uncharacterised conserved protein UCP020269 CLI_RS04200 9d734f5f26ed3b8243f974cadb9d2e63 213 PANTHER PTHR36179 1 213 1.2E-112 T 23-04-2016 CLI_RS04200 9d734f5f26ed3b8243f974cadb9d2e63 213 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 14 207 5.8E-62 T 23-04-2016 IPR003741 LUD domain CLI_RS12535 9f38e0e6b7556e460fa10315625794a6 342 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 1 341 69.675 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS12535 9f38e0e6b7556e460fa10315625794a6 342 SUPERFAMILY SSF102114 99 286 9.55E-11 T 23-04-2016 CLI_RS12535 9f38e0e6b7556e460fa10315625794a6 342 PANTHER PTHR30544 1 339 2.9E-164 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS12535 9f38e0e6b7556e460fa10315625794a6 342 Gene3D G3DSA:3.20.20.70 97 307 1.6E-14 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS12535 9f38e0e6b7556e460fa10315625794a6 342 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 339 4.3E-127 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS12535 9f38e0e6b7556e460fa10315625794a6 342 PANTHER PTHR30544:SF5 1 339 2.9E-164 T 23-04-2016 CLI_RS12535 9f38e0e6b7556e460fa10315625794a6 342 Pfam PF04055 Radical SAM superfamily 105 265 8.3E-18 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS12535 9f38e0e6b7556e460fa10315625794a6 342 PIRSF PIRSF006004 1 342 2.9E-133 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS12535 9f38e0e6b7556e460fa10315625794a6 342 Pfam PF13394 4Fe-4S single cluster domain 110 199 6.1E-8 T 23-04-2016 CLI_RS06560 244619b7819621927840c0f5c829c4e8 203 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 5 201 33.096 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 CLI_RS06560 244619b7819621927840c0f5c829c4e8 203 PANTHER PTHR10429 1 202 9.4E-87 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 CLI_RS06560 244619b7819621927840c0f5c829c4e8 203 Gene3D G3DSA:3.10.300.10 2 202 4.1E-73 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 CLI_RS06560 244619b7819621927840c0f5c829c4e8 203 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 6 197 2.3E-59 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 CLI_RS06560 244619b7819621927840c0f5c829c4e8 203 SUPERFAMILY SSF50486 2 202 6.04E-66 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CLI_RS06560 244619b7819621927840c0f5c829c4e8 203 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 4 201 5.7E-58 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 CLI_RS06560 244619b7819621927840c0f5c829c4e8 203 PANTHER PTHR10429:SF0 1 202 9.4E-87 T 23-04-2016 CLI_RS02870 56d1e86b6a7f128a95a766ea441d8457 169 Gene3D G3DSA:2.160.10.10 2 167 1.6E-48 T 23-04-2016 CLI_RS02870 56d1e86b6a7f128a95a766ea441d8457 169 SUPERFAMILY SSF51161 2 164 1.52E-46 T 23-04-2016 IPR011004 Trimeric LpxA-like CLI_RS02870 56d1e86b6a7f128a95a766ea441d8457 169 PANTHER PTHR13061 1 169 4.9E-68 T 23-04-2016 CLI_RS02870 56d1e86b6a7f128a95a766ea441d8457 169 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 44 0.0019 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS02870 56d1e86b6a7f128a95a766ea441d8457 169 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 2.9E-9 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS16205 165561ce2839239de6831f6956ffec93 300 PIRSF PIRSF000371 2 300 4.4E-108 T 23-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 Gene3D G3DSA:3.80.30.10 124 299 5.3E-65 T 23-04-2016 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 Pfam PF04055 Radical SAM superfamily 92 241 7.4E-24 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 ProSitePatterns PS01087 Radical activating enzymes signature. 17 38 - T 23-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 Pfam PF13353 4Fe-4S single cluster domain 84 172 2.1E-7 T 23-04-2016 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 Gene3D G3DSA:3.30.70.20 31 105 4.8E-16 T 23-04-2016 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 SUPERFAMILY SSF54862 23 101 3.2E-20 T 23-04-2016 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 55 66 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS16205 165561ce2839239de6831f6956ffec93 300 PANTHER PTHR30352 102 300 7.8E-122 T 23-04-2016 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 PANTHER PTHR30352 1 58 7.8E-122 T 23-04-2016 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 SUPERFAMILY SSF102114 93 269 7.06E-24 T 23-04-2016 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 PANTHER PTHR30352:SF4 102 300 7.8E-122 T 23-04-2016 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 PANTHER PTHR30352:SF4 1 58 7.8E-122 T 23-04-2016 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 6 293 1.6E-113 T 23-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLI_RS16205 165561ce2839239de6831f6956ffec93 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 84 95 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS16205 165561ce2839239de6831f6956ffec93 300 Pfam PF00037 4Fe-4S binding domain 50 71 3.9E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS14930 7b16a470789c1531156a819ef19614a4 281 PANTHER PTHR34138 1 277 3.5E-71 T 23-04-2016 CLI_RS14930 7b16a470789c1531156a819ef19614a4 281 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 277 3.5E-41 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 CLI_RS14930 7b16a470789c1531156a819ef19614a4 281 PANTHER PTHR34138:SF1 1 277 3.5E-71 T 23-04-2016 CLI_RS14930 7b16a470789c1531156a819ef19614a4 281 Pfam PF04085 rod shape-determining protein MreC 121 271 1.9E-40 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 CLI_RS14930 7b16a470789c1531156a819ef19614a4 281 PIRSF PIRSF038471 1 281 9.7E-87 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 CLI_RS07345 378a3be9c3741125bbed5b855f042b11 493 PANTHER PTHR11098 1 490 0.0 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 CLI_RS07345 378a3be9c3741125bbed5b855f042b11 493 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 17 476 2.2E-166 T 23-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 CLI_RS07345 378a3be9c3741125bbed5b855f042b11 493 Gene3D G3DSA:3.20.140.10 6 397 4.3E-122 T 23-04-2016 CLI_RS07345 378a3be9c3741125bbed5b855f042b11 493 SUPERFAMILY SSF51690 146 488 2.65E-126 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CLI_RS07345 378a3be9c3741125bbed5b855f042b11 493 PIRSF PIRSF000484 8 490 5.7E-166 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 CLI_RS07345 378a3be9c3741125bbed5b855f042b11 493 SUPERFAMILY SSF54675 12 145 2.8E-48 T 23-04-2016 CLI_RS07345 378a3be9c3741125bbed5b855f042b11 493 PANTHER PTHR11098:SF13 1 490 0.0 T 23-04-2016 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 Gene3D G3DSA:3.30.360.10 164 318 2.7E-79 T 23-04-2016 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 Gene3D G3DSA:3.40.50.720 2 163 3.4E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 SUPERFAMILY SSF55347 155 317 7.44E-74 T 23-04-2016 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 5.7E-141 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 SMART SM00846 3 155 9.3E-92 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 SUPERFAMILY SSF51735 3 171 3.82E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 8.6E-71 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 6.25E-42 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 6.25E-42 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 6.25E-42 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 6.25E-42 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 6.25E-42 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 PANTHER PTHR10836 1 338 2.1E-230 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 PANTHER PTHR10836:SF50 1 338 2.1E-230 T 23-04-2016 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 1.1E-58 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS05745 592c4e13f254865d3b7c581a2b09174c 338 PIRSF PIRSF000149 1 338 1.7E-139 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CLI_RS04805 6737a8841c40a52dadb424f666a8f6c5 531 Gene3D G3DSA:2.10.109.10 409 529 4.4E-37 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CLI_RS04805 6737a8841c40a52dadb424f666a8f6c5 531 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 456 467 2.7E-5 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLI_RS04805 6737a8841c40a52dadb424f666a8f6c5 531 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 445 455 2.7E-5 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLI_RS04805 6737a8841c40a52dadb424f666a8f6c5 531 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 484 496 2.7E-5 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLI_RS04805 6737a8841c40a52dadb424f666a8f6c5 531 PANTHER PTHR11070:SF18 1 262 7.0E-85 T 23-04-2016 CLI_RS04805 6737a8841c40a52dadb424f666a8f6c5 531 SUPERFAMILY SSF51306 407 529 9.59E-28 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CLI_RS04805 6737a8841c40a52dadb424f666a8f6c5 531 Pfam PF00717 Peptidase S24-like 448 515 1.9E-12 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B CLI_RS04805 6737a8841c40a52dadb424f666a8f6c5 531 SUPERFAMILY SSF52540 2 260 1.54E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04805 6737a8841c40a52dadb424f666a8f6c5 531 PANTHER PTHR11070 1 262 7.0E-85 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS04805 6737a8841c40a52dadb424f666a8f6c5 531 Gene3D G3DSA:3.40.50.300 2 152 4.0E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04805 6737a8841c40a52dadb424f666a8f6c5 531 Gene3D G3DSA:3.40.50.300 201 273 4.0E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04805 6737a8841c40a52dadb424f666a8f6c5 531 Pfam PF00580 UvrD/REP helicase N-terminal domain 54 273 7.6E-5 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CLI_RS03445 9c0b77e4d1b1d408e69b448d019c9ffd 477 Gene3D G3DSA:1.20.1250.20 13 197 9.2E-31 T 23-04-2016 CLI_RS03445 9c0b77e4d1b1d408e69b448d019c9ffd 477 Gene3D G3DSA:1.20.1250.20 262 468 2.2E-27 T 23-04-2016 CLI_RS03445 9c0b77e4d1b1d408e69b448d019c9ffd 477 PANTHER PTHR23501:SF5 5 468 5.4E-165 T 23-04-2016 CLI_RS03445 9c0b77e4d1b1d408e69b448d019c9ffd 477 PANTHER PTHR23501 5 468 5.4E-165 T 23-04-2016 CLI_RS03445 9c0b77e4d1b1d408e69b448d019c9ffd 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 341 361 4.2E-11 T 23-04-2016 CLI_RS03445 9c0b77e4d1b1d408e69b448d019c9ffd 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 112 132 4.2E-11 T 23-04-2016 CLI_RS03445 9c0b77e4d1b1d408e69b448d019c9ffd 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 4.2E-11 T 23-04-2016 CLI_RS03445 9c0b77e4d1b1d408e69b448d019c9ffd 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 4.2E-11 T 23-04-2016 CLI_RS03445 9c0b77e4d1b1d408e69b448d019c9ffd 477 SUPERFAMILY SSF103473 252 473 6.93E-75 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS03445 9c0b77e4d1b1d408e69b448d019c9ffd 477 SUPERFAMILY SSF103473 8 200 6.93E-75 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS03445 9c0b77e4d1b1d408e69b448d019c9ffd 477 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 428 1.8E-90 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CLI_RS03445 9c0b77e4d1b1d408e69b448d019c9ffd 477 Pfam PF07690 Major Facilitator Superfamily 25 413 1.8E-59 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS16980 a3b0b12af60611fc65fea038b5312572 302 PRINTS PR00691 Adhesin B signature 38 59 1.5E-6 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CLI_RS16980 a3b0b12af60611fc65fea038b5312572 302 PRINTS PR00691 Adhesin B signature 243 260 1.5E-6 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CLI_RS16980 a3b0b12af60611fc65fea038b5312572 302 PRINTS PR00691 Adhesin B signature 82 101 1.5E-6 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CLI_RS16980 a3b0b12af60611fc65fea038b5312572 302 PRINTS PR00691 Adhesin B signature 141 160 1.5E-6 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CLI_RS16980 a3b0b12af60611fc65fea038b5312572 302 SUPERFAMILY SSF53807 39 301 4.71E-42 T 23-04-2016 CLI_RS16980 a3b0b12af60611fc65fea038b5312572 302 PANTHER PTHR30477 6 253 4.4E-49 T 23-04-2016 CLI_RS16980 a3b0b12af60611fc65fea038b5312572 302 Gene3D G3DSA:3.40.50.1980 37 195 6.3E-31 T 23-04-2016 CLI_RS16980 a3b0b12af60611fc65fea038b5312572 302 Gene3D G3DSA:3.40.50.1980 201 302 7.7E-5 T 23-04-2016 CLI_RS16980 a3b0b12af60611fc65fea038b5312572 302 Pfam PF01297 Zinc-uptake complex component A periplasmic 41 298 2.1E-30 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CLI_RS16980 a3b0b12af60611fc65fea038b5312572 302 PANTHER PTHR30477:SF1 6 253 4.4E-49 T 23-04-2016 CLI_RS02905 47c91308967046e2eb51128c5c8c7f02 638 SUPERFAMILY SSF56317 9 286 3.79E-40 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CLI_RS02905 47c91308967046e2eb51128c5c8c7f02 638 TIGRFAM TIGR00552 nadE: NAD+ synthetase 341 507 3.7E-27 T 23-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 CLI_RS02905 47c91308967046e2eb51128c5c8c7f02 638 PANTHER PTHR23090:SF9 5 637 2.2E-210 T 23-04-2016 CLI_RS02905 47c91308967046e2eb51128c5c8c7f02 638 Gene3D G3DSA:3.40.50.620 318 615 8.1E-67 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS02905 47c91308967046e2eb51128c5c8c7f02 638 Pfam PF02540 NAD synthase 339 531 6.3E-31 T 23-04-2016 IPR022310 NAD/GMP synthase CLI_RS02905 47c91308967046e2eb51128c5c8c7f02 638 SUPERFAMILY SSF52402 316 618 2.03E-74 T 23-04-2016 CLI_RS02905 47c91308967046e2eb51128c5c8c7f02 638 PIRSF PIRSF006630 5 638 2.8E-170 T 23-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 CLI_RS02905 47c91308967046e2eb51128c5c8c7f02 638 PANTHER PTHR23090 5 637 2.2E-210 T 23-04-2016 CLI_RS02905 47c91308967046e2eb51128c5c8c7f02 638 Pfam PF00795 Carbon-nitrogen hydrolase 19 272 2.4E-12 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CLI_RS02905 47c91308967046e2eb51128c5c8c7f02 638 Gene3D G3DSA:3.60.110.10 9 286 2.9E-43 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CLI_RS12195 0f50bda131aaba280e9a68476aa23426 114 PANTHER PTHR15680 1 114 4.9E-50 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12195 0f50bda131aaba280e9a68476aa23426 114 PRINTS PR00061 Ribosomal protein L19 signature 88 113 2.1E-41 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12195 0f50bda131aaba280e9a68476aa23426 114 PRINTS PR00061 Ribosomal protein L19 signature 4 33 2.1E-41 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12195 0f50bda131aaba280e9a68476aa23426 114 PRINTS PR00061 Ribosomal protein L19 signature 34 63 2.1E-41 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12195 0f50bda131aaba280e9a68476aa23426 114 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.767 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12195 0f50bda131aaba280e9a68476aa23426 114 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12195 0f50bda131aaba280e9a68476aa23426 114 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 5.3E-48 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12195 0f50bda131aaba280e9a68476aa23426 114 SUPERFAMILY SSF50104 2 113 7.22E-46 T 23-04-2016 IPR008991 Translation protein SH3-like domain CLI_RS12195 0f50bda131aaba280e9a68476aa23426 114 Pfam PF01245 Ribosomal protein L19 4 113 1.4E-48 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12195 0f50bda131aaba280e9a68476aa23426 114 PIRSF PIRSF002191 1 114 1.1E-47 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS13650 e57b65bd639a2d0ab399d289debd2752 119 SUPERFAMILY SSF52172 1 118 1.85E-41 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS13650 e57b65bd639a2d0ab399d289debd2752 119 Gene3D G3DSA:3.40.50.2300 1 118 6.9E-42 T 23-04-2016 CLI_RS13650 e57b65bd639a2d0ab399d289debd2752 119 SMART SM00448 2 114 2.1E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS13650 e57b65bd639a2d0ab399d289debd2752 119 PANTHER PTHR26402 2 118 3.1E-44 T 23-04-2016 CLI_RS13650 e57b65bd639a2d0ab399d289debd2752 119 Pfam PF00072 Response regulator receiver domain 4 115 4.2E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS03615 b4c9750069ad395f5bfb19e57df47ee6 346 Gene3D G3DSA:1.10.3470.10 19 344 1.4E-96 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS03615 b4c9750069ad395f5bfb19e57df47ee6 346 SUPERFAMILY SSF81345 16 341 1.7E-78 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS03615 b4c9750069ad395f5bfb19e57df47ee6 346 PANTHER PTHR30472 2 346 1.1E-185 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS03615 b4c9750069ad395f5bfb19e57df47ee6 346 Pfam PF01032 FecCD transport family 31 341 2.2E-86 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS03615 b4c9750069ad395f5bfb19e57df47ee6 346 PANTHER PTHR30472:SF1 2 346 1.1E-185 T 23-04-2016 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 SMART SM01005 246 374 7.9E-73 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 PANTHER PTHR30511 3 379 3.4E-167 T 23-04-2016 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 SUPERFAMILY SSF50621 239 381 1.43E-53 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 Gene3D G3DSA:2.40.37.10 226 382 5.9E-64 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 PRINTS PR00992 Alanine racemase signature 66 84 7.3E-62 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 PRINTS PR00992 Alanine racemase signature 162 173 7.3E-62 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 PRINTS PR00992 Alanine racemase signature 205 232 7.3E-62 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 PRINTS PR00992 Alanine racemase signature 262 277 7.3E-62 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 PRINTS PR00992 Alanine racemase signature 279 294 7.3E-62 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 PRINTS PR00992 Alanine racemase signature 300 317 7.3E-62 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 PRINTS PR00992 Alanine racemase signature 127 139 7.3E-62 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 PRINTS PR00992 Alanine racemase signature 356 369 7.3E-62 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 PRINTS PR00992 Alanine racemase signature 30 46 7.3E-62 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 Pfam PF00842 Alanine racemase, C-terminal domain 246 373 2.2E-44 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 PANTHER PTHR30511:SF0 3 379 3.4E-167 T 23-04-2016 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 Hamap MF_01201 Alanine racemase. 5 374 35.403 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 TIGRFAM TIGR00492 alr: alanine racemase 6 373 4.3E-122 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 35 45 - T 23-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 SUPERFAMILY SSF51419 12 247 3.6E-65 T 23-04-2016 IPR029066 PLP-binding barrel CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 Pfam PF01168 Alanine racemase, N-terminal domain 12 232 1.3E-63 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS17430 833d56d63a23c71ae214e9fa9fc093bd 386 Gene3D G3DSA:3.20.20.10 14 225 3.7E-71 T 23-04-2016 IPR029066 PLP-binding barrel CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 Gene3D G3DSA:3.30.420.40 253 496 4.4E-103 T 23-04-2016 CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 360 380 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 SUPERFAMILY SSF53067 3 253 9.66E-95 T 23-04-2016 CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 6.8E-84 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 448 1.3E-62 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 PANTHER PTHR10196 1 498 1.5E-269 T 23-04-2016 CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 PIRSF PIRSF000538 2 498 2.6E-180 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 SUPERFAMILY SSF53067 253 495 2.02E-86 T 23-04-2016 CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 Hamap MF_00186 Glycerol kinase [glpK]. 2 495 59.94 T 23-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 494 1.2E-230 T 23-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 Gene3D G3DSA:3.30.420.40 1 251 2.3E-104 T 23-04-2016 CLI_RS13840 9da9b81d923f70b4d2fc10f2e2a31d9d 498 PANTHER PTHR10196:SF9 1 498 1.5E-269 T 23-04-2016 CLI_RS13955 164d62f064e1220e331af0118c7c989f 213 SUPERFAMILY SSF54862 49 212 8.37E-16 T 23-04-2016 CLI_RS13955 164d62f064e1220e331af0118c7c989f 213 Pfam PF12801 4Fe-4S binding domain 121 160 1.7E-4 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS13955 164d62f064e1220e331af0118c7c989f 213 Pfam PF12801 4Fe-4S binding domain 31 75 2.7E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS13955 164d62f064e1220e331af0118c7c989f 213 Gene3D G3DSA:3.30.70.20 175 212 2.4E-10 T 23-04-2016 CLI_RS13955 164d62f064e1220e331af0118c7c989f 213 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 168 179 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS13955 164d62f064e1220e331af0118c7c989f 213 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 197 208 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS13955 164d62f064e1220e331af0118c7c989f 213 PANTHER PTHR30176 4 213 2.8E-130 T 23-04-2016 CLI_RS13955 164d62f064e1220e331af0118c7c989f 213 Pfam PF13187 4Fe-4S dicluster domain 168 212 8.8E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS13955 164d62f064e1220e331af0118c7c989f 213 PANTHER PTHR30176:SF4 4 213 2.8E-130 T 23-04-2016 CLI_RS13955 164d62f064e1220e331af0118c7c989f 213 Gene3D G3DSA:3.30.70.20 142 174 4.6E-4 T 23-04-2016 CLI_RS02610 6fe106dbd3ff7f4c38d8c5a81434b47e 1176 Gene3D G3DSA:3.40.50.300 1 158 1.5E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02610 6fe106dbd3ff7f4c38d8c5a81434b47e 1176 PANTHER PTHR32114 769 1175 7.7E-128 T 23-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 CLI_RS02610 6fe106dbd3ff7f4c38d8c5a81434b47e 1176 PANTHER PTHR32114 2 722 7.7E-128 T 23-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 CLI_RS02610 6fe106dbd3ff7f4c38d8c5a81434b47e 1176 PANTHER PTHR32114:SF2 769 1175 7.7E-128 T 23-04-2016 CLI_RS02610 6fe106dbd3ff7f4c38d8c5a81434b47e 1176 PANTHER PTHR32114:SF2 2 722 7.7E-128 T 23-04-2016 CLI_RS02610 6fe106dbd3ff7f4c38d8c5a81434b47e 1176 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1060 1131 4.9E-14 T 23-04-2016 CLI_RS02610 6fe106dbd3ff7f4c38d8c5a81434b47e 1176 SUPERFAMILY SSF52540 4 225 2.96E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02610 6fe106dbd3ff7f4c38d8c5a81434b47e 1176 SUPERFAMILY SSF52540 1066 1149 2.96E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02610 6fe106dbd3ff7f4c38d8c5a81434b47e 1176 Gene3D G3DSA:3.40.50.300 1073 1150 2.3E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02610 6fe106dbd3ff7f4c38d8c5a81434b47e 1176 Pfam PF13476 AAA domain 5 263 3.8E-23 T 23-04-2016 CLI_RS12165 e51f0dabc498acc20bf1550e66ae771d 361 PANTHER PTHR32039 17 360 1.4E-121 T 23-04-2016 CLI_RS12165 e51f0dabc498acc20bf1550e66ae771d 361 SUPERFAMILY SSF102405 82 287 3.66E-35 T 23-04-2016 CLI_RS12165 e51f0dabc498acc20bf1550e66ae771d 361 PANTHER PTHR32039:SF8 17 360 1.4E-121 T 23-04-2016 CLI_RS12165 e51f0dabc498acc20bf1550e66ae771d 361 Gene3D G3DSA:3.40.50.450 117 273 3.2E-8 T 23-04-2016 CLI_RS12165 e51f0dabc498acc20bf1550e66ae771d 361 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 285 4.4E-73 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 CLI_RS12165 e51f0dabc498acc20bf1550e66ae771d 361 Pfam PF02481 DNA recombination-mediator protein A 73 278 1.6E-76 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 CLI_RS03145 e34cceb0e38099324fe98e858a267e27 570 SUPERFAMILY SSF90123 8 317 6.67E-64 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS03145 e34cceb0e38099324fe98e858a267e27 570 Gene3D G3DSA:3.40.50.300 333 565 2.5E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03145 e34cceb0e38099324fe98e858a267e27 570 Pfam PF00005 ABC transporter 351 497 5.2E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03145 e34cceb0e38099324fe98e858a267e27 570 PANTHER PTHR24221 2 565 1.3E-155 T 23-04-2016 CLI_RS03145 e34cceb0e38099324fe98e858a267e27 570 Pfam PF00664 ABC transporter transmembrane region 21 289 5.3E-46 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS03145 e34cceb0e38099324fe98e858a267e27 570 SMART SM00382 359 543 5.1E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03145 e34cceb0e38099324fe98e858a267e27 570 Gene3D G3DSA:1.20.1560.10 8 315 8.9E-64 T 23-04-2016 CLI_RS03145 e34cceb0e38099324fe98e858a267e27 570 SUPERFAMILY SSF52540 330 565 1.51E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03145 e34cceb0e38099324fe98e858a267e27 570 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS02415 43d43cd79d92bd0ce03494b2dd0710f8 113 PIRSF PIRSF004761 1 113 5.2E-25 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CLI_RS02415 43d43cd79d92bd0ce03494b2dd0710f8 113 PANTHER PTHR34535 2 110 3.2E-53 T 23-04-2016 CLI_RS02415 43d43cd79d92bd0ce03494b2dd0710f8 113 PANTHER PTHR34535:SF2 2 110 3.2E-53 T 23-04-2016 CLI_RS02415 43d43cd79d92bd0ce03494b2dd0710f8 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 2 110 2.6E-25 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CLI_RS14505 2cb72f34dc98d18e851948cffd9263ba 458 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 13 457 42.432 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CLI_RS14505 2cb72f34dc98d18e851948cffd9263ba 458 Gene3D G3DSA:3.40.50.2020 274 437 1.3E-37 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS14505 2cb72f34dc98d18e851948cffd9263ba 458 PANTHER PTHR11907 11 455 3.2E-182 T 23-04-2016 CLI_RS14505 2cb72f34dc98d18e851948cffd9263ba 458 SUPERFAMILY SSF53271 252 456 1.31E-54 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS14505 2cb72f34dc98d18e851948cffd9263ba 458 PANTHER PTHR11907:SF0 11 455 3.2E-182 T 23-04-2016 CLI_RS14505 2cb72f34dc98d18e851948cffd9263ba 458 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 14 455 9.1E-131 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CLI_RS14505 2cb72f34dc98d18e851948cffd9263ba 458 Pfam PF00156 Phosphoribosyl transferase domain 281 389 8.2E-8 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS14505 2cb72f34dc98d18e851948cffd9263ba 458 SUPERFAMILY SSF56235 14 249 6.6E-60 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS14505 2cb72f34dc98d18e851948cffd9263ba 458 Pfam PF13522 Glutamine amidotransferase domain 81 210 1.5E-18 T 23-04-2016 CLI_RS14505 2cb72f34dc98d18e851948cffd9263ba 458 PIRSF PIRSF000485 10 457 2.2E-148 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CLI_RS14505 2cb72f34dc98d18e851948cffd9263ba 458 Gene3D G3DSA:3.60.20.10 14 259 1.8E-59 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS12130 5c87f7d92019d1c6d709383b3933fae7 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 184 27.707 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 CLI_RS12130 5c87f7d92019d1c6d709383b3933fae7 184 Gene3D G3DSA:1.10.132.20 66 183 1.5E-43 T 23-04-2016 IPR023584 Ribosome recycling factor domain CLI_RS12130 5c87f7d92019d1c6d709383b3933fae7 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 1.7E-69 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 CLI_RS12130 5c87f7d92019d1c6d709383b3933fae7 184 PANTHER PTHR20982 1 184 4.8E-79 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 CLI_RS12130 5c87f7d92019d1c6d709383b3933fae7 184 Pfam PF01765 Ribosome recycling factor 20 182 1.3E-65 T 23-04-2016 IPR023584 Ribosome recycling factor domain CLI_RS12130 5c87f7d92019d1c6d709383b3933fae7 184 SUPERFAMILY SSF55194 3 182 4.32E-70 T 23-04-2016 IPR023584 Ribosome recycling factor domain CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 101 114 - T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 Gene3D G3DSA:3.40.192.10 38 180 8.1E-60 T 23-04-2016 CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 PANTHER PTHR11606 4 420 8.7E-185 T 23-04-2016 CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 SUPERFAMILY SSF51735 182 421 2.33E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 182 419 1.6E-66 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 SMART SM00839 184 419 6.2E-90 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 PIRSF PIRSF000185 3 421 2.0E-160 T 23-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 SUPERFAMILY SSF53223 5 184 9.6E-73 T 23-04-2016 CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 195 9.2E-34 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 215 235 9.2E-34 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 347 358 9.2E-34 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 93 107 9.2E-34 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 Gene3D G3DSA:3.40.50.720 182 420 4.6E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS08830 a51546a4a65f8d75601e01bfa2bf8680 421 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 36 163 2.5E-56 T 23-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 SMART SM01382 124 253 1.2E-89 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 1.6E-134 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 SUPERFAMILY SSF50249 2 125 4.46E-51 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 6.6E-55 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.4E-35 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 SUPERFAMILY SSF50104 126 273 3.97E-60 T 23-04-2016 IPR008991 Translation protein SH3-like domain CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 Gene3D G3DSA:2.30.30.30 119 195 1.0E-35 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 47.361 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 PANTHER PTHR13691 1 276 3.1E-144 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 Gene3D G3DSA:4.10.950.10 196 274 7.9E-34 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 SMART SM01383 42 118 4.5E-48 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 Gene3D G3DSA:2.40.50.140 1 114 2.6E-52 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17825 36b747db65766e85bd4cb77accff9ccb 277 PIRSF PIRSF002158 7 276 1.1E-98 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS05160 1c7b88c0a55ed6bd333cd5a1b8dd9374 281 Gene3D G3DSA:3.20.20.100 7 271 2.6E-104 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS05160 1c7b88c0a55ed6bd333cd5a1b8dd9374 281 Pfam PF00248 Aldo/keto reductase family 19 260 3.9E-57 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS05160 1c7b88c0a55ed6bd333cd5a1b8dd9374 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 124 141 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CLI_RS05160 1c7b88c0a55ed6bd333cd5a1b8dd9374 281 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 228 243 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CLI_RS05160 1c7b88c0a55ed6bd333cd5a1b8dd9374 281 PRINTS PR00069 Aldo-keto reductase signature 124 141 2.9E-48 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS05160 1c7b88c0a55ed6bd333cd5a1b8dd9374 281 PRINTS PR00069 Aldo-keto reductase signature 95 113 2.9E-48 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS05160 1c7b88c0a55ed6bd333cd5a1b8dd9374 281 PRINTS PR00069 Aldo-keto reductase signature 158 187 2.9E-48 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS05160 1c7b88c0a55ed6bd333cd5a1b8dd9374 281 PRINTS PR00069 Aldo-keto reductase signature 39 63 2.9E-48 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS05160 1c7b88c0a55ed6bd333cd5a1b8dd9374 281 PRINTS PR00069 Aldo-keto reductase signature 195 219 2.9E-48 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS05160 1c7b88c0a55ed6bd333cd5a1b8dd9374 281 PANTHER PTHR11732 4 269 9.9E-146 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta CLI_RS05160 1c7b88c0a55ed6bd333cd5a1b8dd9374 281 SUPERFAMILY SSF51430 6 267 1.23E-96 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS14375 9114f08290727d78eb59b62f65353abe 464 Gene3D G3DSA:3.20.20.140 68 376 8.6E-103 T 23-04-2016 CLI_RS14375 9114f08290727d78eb59b62f65353abe 464 SUPERFAMILY SSF51556 53 383 1.48E-98 T 23-04-2016 IPR032466 Metal-dependent hydrolase CLI_RS14375 9114f08290727d78eb59b62f65353abe 464 SUPERFAMILY SSF51338 352 458 5.4E-40 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS14375 9114f08290727d78eb59b62f65353abe 464 PANTHER PTHR11647 1 456 1.3E-189 T 23-04-2016 CLI_RS14375 9114f08290727d78eb59b62f65353abe 464 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 455 3.3E-175 T 23-04-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 CLI_RS14375 9114f08290727d78eb59b62f65353abe 464 Gene3D G3DSA:2.30.40.10 3 67 1.7E-25 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS14375 9114f08290727d78eb59b62f65353abe 464 PANTHER PTHR11647:SF1 1 456 1.3E-189 T 23-04-2016 CLI_RS14375 9114f08290727d78eb59b62f65353abe 464 SUPERFAMILY SSF51338 1 64 7.4E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS14375 9114f08290727d78eb59b62f65353abe 464 Pfam PF01979 Amidohydrolase family 49 436 4.5E-25 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CLI_RS14375 9114f08290727d78eb59b62f65353abe 464 Gene3D G3DSA:2.30.40.10 377 455 1.3E-13 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS00070 4acf7f78ab0c6f95f5b117a8fda57516 150 SUPERFAMILY SSF109604 97 150 3.43E-10 T 23-04-2016 CLI_RS00070 4acf7f78ab0c6f95f5b117a8fda57516 150 SUPERFAMILY SSF109604 27 67 3.43E-10 T 23-04-2016 CLI_RS00070 4acf7f78ab0c6f95f5b117a8fda57516 150 Pfam PF01966 HD domain 30 138 1.9E-8 T 23-04-2016 IPR006674 HD domain CLI_RS00070 4acf7f78ab0c6f95f5b117a8fda57516 150 TIGRFAM TIGR00277 HDIG: HDIG domain 30 132 1.3E-7 T 23-04-2016 IPR006675 HDIG domain CLI_RS00070 4acf7f78ab0c6f95f5b117a8fda57516 150 Gene3D G3DSA:1.10.3210.10 22 145 7.8E-11 T 23-04-2016 IPR006674 HD domain CLI_RS05240 cbb2a763515e0ff1eb59f234d3d569ce 197 SUPERFAMILY SSF102114 26 102 9.61E-11 T 23-04-2016 CLI_RS05240 cbb2a763515e0ff1eb59f234d3d569ce 197 PANTHER PTHR30352 1 146 2.2E-51 T 23-04-2016 CLI_RS05240 cbb2a763515e0ff1eb59f234d3d569ce 197 Pfam PF13353 4Fe-4S single cluster domain 14 148 1.7E-36 T 23-04-2016 CLI_RS05240 cbb2a763515e0ff1eb59f234d3d569ce 197 PANTHER PTHR30352:SF2 1 146 2.2E-51 T 23-04-2016 CLI_RS05240 cbb2a763515e0ff1eb59f234d3d569ce 197 Pfam PF04055 Radical SAM superfamily 25 110 3.5E-7 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS05240 cbb2a763515e0ff1eb59f234d3d569ce 197 PIRSF PIRSF000368 1 166 5.8E-47 T 23-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- CLI_RS05240 cbb2a763515e0ff1eb59f234d3d569ce 197 Gene3D G3DSA:3.20.20.70 26 117 1.3E-10 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS02210 4a2dff96f9fc2c5610c4f69231271991 684 Pfam PF00672 HAMP domain 308 375 7.2E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS02210 4a2dff96f9fc2c5610c4f69231271991 684 SUPERFAMILY SSF103190 57 208 2.82E-8 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS02210 4a2dff96f9fc2c5610c4f69231271991 684 Pfam PF02743 Cache domain 38 289 7.6E-32 T 23-04-2016 IPR033479 Double Cache domain 1 CLI_RS02210 4a2dff96f9fc2c5610c4f69231271991 684 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 465 670 1.7E-50 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS02210 4a2dff96f9fc2c5610c4f69231271991 684 PANTHER PTHR32089 80 684 2.8E-303 T 23-04-2016 CLI_RS02210 4a2dff96f9fc2c5610c4f69231271991 684 SMART SM00283 394 683 1.7E-78 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS02210 4a2dff96f9fc2c5610c4f69231271991 684 Gene3D G3DSA:3.30.450.20 163 304 1.2E-33 T 23-04-2016 CLI_RS02210 4a2dff96f9fc2c5610c4f69231271991 684 Gene3D G3DSA:1.10.287.950 423 639 1.0E-54 T 23-04-2016 CLI_RS02210 4a2dff96f9fc2c5610c4f69231271991 684 PANTHER PTHR32089:SF36 80 684 2.8E-303 T 23-04-2016 CLI_RS02210 4a2dff96f9fc2c5610c4f69231271991 684 SMART SM00304 327 379 2.4E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS02210 4a2dff96f9fc2c5610c4f69231271991 684 SUPERFAMILY SSF58104 414 683 5.23E-72 T 23-04-2016 CLI_RS02210 4a2dff96f9fc2c5610c4f69231271991 684 SUPERFAMILY SSF58104 347 381 5.23E-72 T 23-04-2016 CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 Pfam PF07690 Major Facilitator Superfamily 3 370 4.6E-47 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 PANTHER PTHR23501:SF82 1 452 1.1E-177 T 23-04-2016 CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 SUPERFAMILY SSF103473 209 381 9.02E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 SUPERFAMILY SSF103473 3 161 9.02E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 SUPERFAMILY SSF103473 410 437 9.02E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 5 381 6.0E-100 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 Gene3D G3DSA:1.20.1250.20 3 152 1.2E-29 T 23-04-2016 CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 Gene3D G3DSA:1.20.1250.20 227 439 1.5E-17 T 23-04-2016 CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 PANTHER PTHR23501 1 452 1.1E-177 T 23-04-2016 CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 PRINTS PR01036 Tetracycline resistance protein TetB signature 38 60 1.6E-7 T 23-04-2016 CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 PRINTS PR01036 Tetracycline resistance protein TetB signature 99 123 1.6E-7 T 23-04-2016 CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 PRINTS PR01036 Tetracycline resistance protein TetB signature 361 380 1.6E-7 T 23-04-2016 CLI_RS08535 6e3525c0bc06b3a11aca7b1f5c0d796d 452 PRINTS PR01036 Tetracycline resistance protein TetB signature 263 287 1.6E-7 T 23-04-2016 CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 PANTHER PTHR11019 7 111 2.0E-24 T 23-04-2016 CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 8.6E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 8.6E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 SMART SM00342 21 103 7.9E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 Gene3D G3DSA:3.20.80.10 119 293 1.9E-28 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 SMART SM00871 123 293 5.6E-35 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 Gene3D G3DSA:1.10.10.60 58 102 6.6E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 SUPERFAMILY SSF46689 57 105 3.45E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 SUPERFAMILY SSF55136 123 295 1.74E-21 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 SUPERFAMILY SSF46689 5 55 3.23E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 Pfam PF12833 Helix-turn-helix domain 27 103 2.9E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 Gene3D G3DSA:1.10.10.60 3 57 8.2E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 99 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLI_RS03240 d2c5210fac9f3d3e94f81233d724c35c 295 Pfam PF14526 Integron-associated effector binding protein 127 292 1.7E-25 T 23-04-2016 IPR029441 Integron-associated effector binding protein CLI_RS04650 6ae71953deeec910de2a4777f71633a1 317 PANTHER PTHR22926 1 313 1.9E-131 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS04650 6ae71953deeec910de2a4777f71633a1 317 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 17 316 5.7E-87 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS04650 6ae71953deeec910de2a4777f71633a1 317 ProSitePatterns PS01348 MraY family signature 2. 164 175 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS04650 6ae71953deeec910de2a4777f71633a1 317 Pfam PF00953 Glycosyl transferase family 4 77 244 3.6E-34 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS04650 6ae71953deeec910de2a4777f71633a1 317 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 317 20.186 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS04650 6ae71953deeec910de2a4777f71633a1 317 PANTHER PTHR22926:SF5 1 313 1.9E-131 T 23-04-2016 CLI_RS05565 fe5d600a9722d3546760f39830e284dd 680 PANTHER PTHR12145:SF11 6 677 0.0 T 23-04-2016 CLI_RS05565 fe5d600a9722d3546760f39830e284dd 680 PIRSF PIRSF006402 1 679 2.1E-247 T 23-04-2016 IPR024705 Spermatogenesis-associated protein 20 CLI_RS05565 fe5d600a9722d3546760f39830e284dd 680 SUPERFAMILY SSF52833 6 145 2.2E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS05565 fe5d600a9722d3546760f39830e284dd 680 Gene3D G3DSA:3.40.30.10 24 151 1.8E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS05565 fe5d600a9722d3546760f39830e284dd 680 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 267 320 0.47 T 23-04-2016 CLI_RS05565 fe5d600a9722d3546760f39830e284dd 680 PANTHER PTHR12145 6 677 0.0 T 23-04-2016 CLI_RS05565 fe5d600a9722d3546760f39830e284dd 680 Pfam PF03190 Protein of unknown function, DUF255 6 167 1.3E-78 T 23-04-2016 IPR004879 Domain of unknown function DUF255 CLI_RS05565 fe5d600a9722d3546760f39830e284dd 680 SUPERFAMILY SSF48208 182 535 7.83E-85 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 CLI_RS05565 fe5d600a9722d3546760f39830e284dd 680 Gene3D G3DSA:1.50.10.10 176 529 1.1E-26 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 CLI_RS00140 7989659f565e1b318667297f3dcee9bf 295 Pfam PF02666 Phosphatidylserine decarboxylase 86 292 1.8E-56 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CLI_RS00140 7989659f565e1b318667297f3dcee9bf 295 PANTHER PTHR10067 1 292 1.2E-89 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CLI_RS00140 7989659f565e1b318667297f3dcee9bf 295 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 76 293 2.5E-44 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CLI_RS00140 7989659f565e1b318667297f3dcee9bf 295 Hamap MF_00663 Phosphatidylserine decarboxylase proenzyme [psd]. 1 294 50.508 T 23-04-2016 IPR033179 Phosphatidylserine decarboxylase, prokaryotic type 2 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 Pfam PF02867 Ribonucleotide reductase, barrel domain 676 747 1.2E-17 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 Pfam PF02867 Ribonucleotide reductase, barrel domain 236 670 1.5E-132 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 Pfam PF03477 ATP cone domain 3 102 1.6E-21 T 23-04-2016 IPR005144 ATP-cone domain CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 157 231 1.7E-21 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 PANTHER PTHR11573 5 467 1.9E-295 T 23-04-2016 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 PANTHER PTHR11573 491 761 1.9E-295 T 23-04-2016 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 PANTHER PTHR11573:SF6 5 467 1.9E-295 T 23-04-2016 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 PANTHER PTHR11573:SF6 491 761 1.9E-295 T 23-04-2016 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 451 462 6.0E-37 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 632 659 6.0E-37 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 543 565 6.0E-37 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 571 594 6.0E-37 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 311 330 6.0E-37 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 505 528 6.0E-37 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 160 750 8.9E-179 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 621 643 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 SUPERFAMILY SSF48168 8 234 3.27E-64 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 Gene3D G3DSA:3.20.70.20 417 591 3.0E-67 T 23-04-2016 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 Gene3D G3DSA:3.20.70.20 632 752 3.0E-67 T 23-04-2016 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 Gene3D G3DSA:3.20.70.20 144 357 3.0E-67 T 23-04-2016 CLI_RS13990 500d27ec0ddfa0ce48d038a1542711fa 763 SUPERFAMILY SSF51998 235 762 2.11E-163 T 23-04-2016 CLI_RS08050 30c315e65f07a90c4e2a6f6ba9160de6 212 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 3 211 56.338 T 23-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CLI_RS08050 30c315e65f07a90c4e2a6f6ba9160de6 212 Pfam PF01634 ATP phosphoribosyltransferase 55 206 7.2E-54 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CLI_RS08050 30c315e65f07a90c4e2a6f6ba9160de6 212 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 146 167 - T 23-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CLI_RS08050 30c315e65f07a90c4e2a6f6ba9160de6 212 Gene3D G3DSA:3.40.190.10 4 145 1.1E-43 T 23-04-2016 CLI_RS08050 30c315e65f07a90c4e2a6f6ba9160de6 212 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 4 187 1.1E-62 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CLI_RS08050 30c315e65f07a90c4e2a6f6ba9160de6 212 PANTHER PTHR21403:SF3 2 212 2.2E-102 T 23-04-2016 CLI_RS08050 30c315e65f07a90c4e2a6f6ba9160de6 212 PANTHER PTHR21403 2 212 2.2E-102 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CLI_RS08050 30c315e65f07a90c4e2a6f6ba9160de6 212 SUPERFAMILY SSF53850 3 210 1.34E-66 T 23-04-2016 CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 6.7E-107 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 9.8E-55 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 9.8E-55 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 9.8E-55 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 9.8E-55 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 9.8E-55 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 23-04-2016 IPR018215 ClpP, Ser active site CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 PANTHER PTHR10381 3 191 2.2E-133 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 Pfam PF00574 Clp protease 13 192 6.4E-89 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.102 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 SUPERFAMILY SSF52096 10 192 1.44E-73 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 23-04-2016 IPR033135 ClpP, histidine active site CLI_RS16445 37889f878f2589f1acff6074f82bf618 194 Gene3D G3DSA:3.90.226.10 3 193 1.7E-89 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS01250 174530d9dcc4ff4b13603c294485399a 155 SUPERFAMILY SSF75217 3 154 3.66E-42 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CLI_RS01250 174530d9dcc4ff4b13603c294485399a 155 PANTHER PTHR12029:SF31 3 154 1.3E-73 T 23-04-2016 CLI_RS01250 174530d9dcc4ff4b13603c294485399a 155 PIRSF PIRSF029256 2 155 2.3E-65 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CLI_RS01250 174530d9dcc4ff4b13603c294485399a 155 Pfam PF00588 SpoU rRNA Methylase family 3 143 1.1E-32 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CLI_RS01250 174530d9dcc4ff4b13603c294485399a 155 Gene3D G3DSA:3.40.1280.10 3 154 7.8E-63 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLI_RS01250 174530d9dcc4ff4b13603c294485399a 155 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 3 154 2.3E-57 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CLI_RS01250 174530d9dcc4ff4b13603c294485399a 155 PANTHER PTHR12029 3 154 1.3E-73 T 23-04-2016 CLI_RS01250 174530d9dcc4ff4b13603c294485399a 155 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 152 35.503 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CLI_RS02995 dff3dc1f6c2dde1d0720599ba3a05df7 131 SUPERFAMILY SSF81330 11 122 2.22E-33 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CLI_RS02995 dff3dc1f6c2dde1d0720599ba3a05df7 131 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 127 1.7E-45 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CLI_RS02995 dff3dc1f6c2dde1d0720599ba3a05df7 131 PANTHER PTHR30266 1 127 9.5E-47 T 23-04-2016 CLI_RS02995 dff3dc1f6c2dde1d0720599ba3a05df7 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 80 88 5.56E-11 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CLI_RS02995 dff3dc1f6c2dde1d0720599ba3a05df7 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 98 5.56E-11 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CLI_RS02995 dff3dc1f6c2dde1d0720599ba3a05df7 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 5.56E-11 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CLI_RS02995 dff3dc1f6c2dde1d0720599ba3a05df7 131 PANTHER PTHR30266:SF2 1 127 9.5E-47 T 23-04-2016 CLI_RS02995 dff3dc1f6c2dde1d0720599ba3a05df7 131 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 126 6.6E-44 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CLI_RS02995 dff3dc1f6c2dde1d0720599ba3a05df7 131 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 129 28.708 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CLI_RS02015 0fdf4b150b17d17644e4184ea7e7c3f5 440 Gene3D G3DSA:3.40.640.10 52 289 9.4E-58 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS02015 0fdf4b150b17d17644e4184ea7e7c3f5 440 Gene3D G3DSA:3.90.1150.10 290 427 3.7E-17 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS02015 0fdf4b150b17d17644e4184ea7e7c3f5 440 SUPERFAMILY SSF53383 26 430 4.38E-85 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS02015 0fdf4b150b17d17644e4184ea7e7c3f5 440 Pfam PF00266 Aminotransferase class-V 31 420 4.7E-85 T 23-04-2016 IPR000192 Aminotransferase class V domain CLI_RS02015 0fdf4b150b17d17644e4184ea7e7c3f5 440 PANTHER PTHR11601:SF17 28 437 1.7E-148 T 23-04-2016 CLI_RS02015 0fdf4b150b17d17644e4184ea7e7c3f5 440 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 223 242 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLI_RS02015 0fdf4b150b17d17644e4184ea7e7c3f5 440 PANTHER PTHR11601 28 437 1.7E-148 T 23-04-2016 CLI_RS10720 3e66070a3741c956d2314c6a112b0910 81 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 66 7.9E-22 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS10720 3e66070a3741c956d2314c6a112b0910 81 Gene3D G3DSA:1.10.260.40 2 70 3.7E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS10720 3e66070a3741c956d2314c6a112b0910 81 SMART SM00530 5 61 2.4E-4 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS10720 3e66070a3741c956d2314c6a112b0910 81 SUPERFAMILY SSF47413 1 67 6.82E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS10720 3e66070a3741c956d2314c6a112b0910 81 PANTHER PTHR37301 1 78 1.3E-31 T 23-04-2016 CLI_RS05685 a237bab4d0c131500a28c24ab00cfec1 318 Gene3D G3DSA:3.40.50.300 1 229 2.6E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05685 a237bab4d0c131500a28c24ab00cfec1 318 SMART SM00382 26 214 1.2E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS05685 a237bab4d0c131500a28c24ab00cfec1 318 PANTHER PTHR24220:SF549 3 251 1.8E-144 T 23-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 CLI_RS05685 a237bab4d0c131500a28c24ab00cfec1 318 SMART SM00930 245 318 1.6E-17 T 23-04-2016 IPR018449 NIL domain CLI_RS05685 a237bab4d0c131500a28c24ab00cfec1 318 Gene3D G3DSA:3.30.70.260 230 317 7.4E-16 T 23-04-2016 CLI_RS05685 a237bab4d0c131500a28c24ab00cfec1 318 PANTHER PTHR24220 3 251 1.8E-144 T 23-04-2016 CLI_RS05685 a237bab4d0c131500a28c24ab00cfec1 318 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS05685 a237bab4d0c131500a28c24ab00cfec1 318 SUPERFAMILY SSF55021 236 317 3.09E-15 T 23-04-2016 CLI_RS05685 a237bab4d0c131500a28c24ab00cfec1 318 SUPERFAMILY SSF52540 1 233 5.45E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05685 a237bab4d0c131500a28c24ab00cfec1 318 Pfam PF00005 ABC transporter 17 165 1.7E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS05685 a237bab4d0c131500a28c24ab00cfec1 318 Pfam PF09383 NIL domain 248 317 2.2E-13 T 23-04-2016 IPR018449 NIL domain CLI_RS09990 50b8be88c7abff0608f5245bce122eae 355 PANTHER PTHR30511 1 338 1.3E-90 T 23-04-2016 CLI_RS09990 50b8be88c7abff0608f5245bce122eae 355 Pfam PF01168 Alanine racemase, N-terminal domain 10 223 6.4E-19 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS09990 50b8be88c7abff0608f5245bce122eae 355 PANTHER PTHR30511:SF3 1 338 1.3E-90 T 23-04-2016 CLI_RS09990 50b8be88c7abff0608f5245bce122eae 355 Gene3D G3DSA:3.20.20.10 12 203 7.2E-16 T 23-04-2016 IPR029066 PLP-binding barrel CLI_RS09990 50b8be88c7abff0608f5245bce122eae 355 SUPERFAMILY SSF51419 10 229 3.92E-26 T 23-04-2016 IPR029066 PLP-binding barrel CLI_RS09460 1ec8f5d94301187bfd1675064fac2bc7 166 Pfam PF13730 Helix-turn-helix domain 17 70 2.4E-9 T 23-04-2016 CLI_RS09460 1ec8f5d94301187bfd1675064fac2bc7 166 Gene3D G3DSA:1.10.10.10 25 98 2.4E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09460 1ec8f5d94301187bfd1675064fac2bc7 166 SUPERFAMILY SSF46785 25 76 3.35E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS00525 1e0dbcc7a9b97517e8b0a62db0ea2f4c 352 Gene3D G3DSA:2.40.40.10 283 332 3.7E-5 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CLI_RS00525 1e0dbcc7a9b97517e8b0a62db0ea2f4c 352 PANTHER PTHR21666 1 324 7.3E-75 T 23-04-2016 CLI_RS00525 1e0dbcc7a9b97517e8b0a62db0ea2f4c 352 SMART SM01208 152 230 1.6E-24 T 23-04-2016 IPR011098 G5 domain CLI_RS00525 1e0dbcc7a9b97517e8b0a62db0ea2f4c 352 Pfam PF03990 Domain of unknown function (DUF348) 99 138 1.9E-10 T 23-04-2016 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- CLI_RS00525 1e0dbcc7a9b97517e8b0a62db0ea2f4c 352 Pfam PF03990 Domain of unknown function (DUF348) 43 82 3.1E-9 T 23-04-2016 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- CLI_RS00525 1e0dbcc7a9b97517e8b0a62db0ea2f4c 352 PANTHER PTHR21666:SF181 1 324 7.3E-75 T 23-04-2016 CLI_RS00525 1e0dbcc7a9b97517e8b0a62db0ea2f4c 352 Pfam PF07501 G5 domain 156 229 2.7E-19 T 23-04-2016 IPR011098 G5 domain CLI_RS00525 1e0dbcc7a9b97517e8b0a62db0ea2f4c 352 Pfam PF06725 3D domain 291 351 4.1E-22 T 23-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CLI_RS00525 1e0dbcc7a9b97517e8b0a62db0ea2f4c 352 SUPERFAMILY SSF50685 290 339 8.02E-10 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CLI_RS15395 9f439912e726770a9552525f4200204f 577 Gene3D G3DSA:3.40.50.150 61 299 5.4E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS15395 9f439912e726770a9552525f4200204f 577 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 182 194 1.7E-12 T 23-04-2016 CLI_RS15395 9f439912e726770a9552525f4200204f 577 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 88 102 1.7E-12 T 23-04-2016 CLI_RS15395 9f439912e726770a9552525f4200204f 577 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 218 242 1.7E-12 T 23-04-2016 CLI_RS15395 9f439912e726770a9552525f4200204f 577 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 58 74 1.7E-12 T 23-04-2016 CLI_RS15395 9f439912e726770a9552525f4200204f 577 Pfam PF12950 TaqI-like C-terminal specificity domain 400 543 5.1E-13 T 23-04-2016 IPR025931 TaqI-like C-terminal specificity domain CLI_RS15395 9f439912e726770a9552525f4200204f 577 PANTHER PTHR33841:SF1 36 573 1.1E-82 T 23-04-2016 CLI_RS15395 9f439912e726770a9552525f4200204f 577 PANTHER PTHR33841 36 573 1.1E-82 T 23-04-2016 CLI_RS15395 9f439912e726770a9552525f4200204f 577 Pfam PF07669 Eco57I restriction-modification methylase 182 291 1.3E-7 T 23-04-2016 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 CLI_RS15395 9f439912e726770a9552525f4200204f 577 SUPERFAMILY SSF53335 6 318 2.68E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS14355 869cde57807f1093c9f5362576011a3a 405 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CLI_RS14355 869cde57807f1093c9f5362576011a3a 405 PANTHER PTHR11014:SF116 1 403 6.1E-263 T 23-04-2016 CLI_RS14355 869cde57807f1093c9f5362576011a3a 405 SUPERFAMILY SSF55031 161 283 6.73E-15 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS14355 869cde57807f1093c9f5362576011a3a 405 Pfam PF01546 Peptidase family M20/M25/M40 77 393 1.8E-27 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLI_RS14355 869cde57807f1093c9f5362576011a3a 405 Gene3D G3DSA:3.40.630.10 5 185 3.2E-56 T 23-04-2016 CLI_RS14355 869cde57807f1093c9f5362576011a3a 405 Gene3D G3DSA:3.40.630.10 311 394 3.2E-56 T 23-04-2016 CLI_RS14355 869cde57807f1093c9f5362576011a3a 405 Gene3D G3DSA:3.30.70.360 186 291 1.5E-17 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS14355 869cde57807f1093c9f5362576011a3a 405 Pfam PF07687 Peptidase dimerisation domain 182 286 5.9E-19 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS14355 869cde57807f1093c9f5362576011a3a 405 PANTHER PTHR11014 1 403 6.1E-263 T 23-04-2016 CLI_RS14355 869cde57807f1093c9f5362576011a3a 405 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 7 400 5.0E-228 T 23-04-2016 IPR017706 Peptidase M20/DapE, YgeY CLI_RS14355 869cde57807f1093c9f5362576011a3a 405 SUPERFAMILY SSF53187 7 184 1.03E-58 T 23-04-2016 CLI_RS14355 869cde57807f1093c9f5362576011a3a 405 SUPERFAMILY SSF53187 315 397 1.03E-58 T 23-04-2016 CLI_RS08975 57290d981020255093783ed98408abe6 471 PANTHER PTHR11993:SF22 142 212 6.0E-171 T 23-04-2016 CLI_RS08975 57290d981020255093783ed98408abe6 471 PANTHER PTHR11993:SF22 288 463 6.0E-171 T 23-04-2016 CLI_RS08975 57290d981020255093783ed98408abe6 471 PANTHER PTHR11993:SF22 2 116 6.0E-171 T 23-04-2016 CLI_RS08975 57290d981020255093783ed98408abe6 471 SUPERFAMILY SSF56762 4 456 2.62E-122 T 23-04-2016 IPR029014 NiFe hydrogenase-like CLI_RS08975 57290d981020255093783ed98408abe6 471 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 23-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CLI_RS08975 57290d981020255093783ed98408abe6 471 Gene3D G3DSA:1.10.645.10 1 456 1.2E-139 T 23-04-2016 IPR029014 NiFe hydrogenase-like CLI_RS08975 57290d981020255093783ed98408abe6 471 PANTHER PTHR11993 142 212 6.0E-171 T 23-04-2016 CLI_RS08975 57290d981020255093783ed98408abe6 471 PANTHER PTHR11993 288 463 6.0E-171 T 23-04-2016 CLI_RS08975 57290d981020255093783ed98408abe6 471 PANTHER PTHR11993 2 116 6.0E-171 T 23-04-2016 CLI_RS08975 57290d981020255093783ed98408abe6 471 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 447 456 - T 23-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CLI_RS08975 57290d981020255093783ed98408abe6 471 Pfam PF00374 Nickel-dependent hydrogenase 330 456 3.2E-36 T 23-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CLI_RS08975 57290d981020255093783ed98408abe6 471 Pfam PF00374 Nickel-dependent hydrogenase 131 344 1.6E-42 T 23-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CLI_RS08975 57290d981020255093783ed98408abe6 471 Pfam PF00374 Nickel-dependent hydrogenase 39 122 1.1E-21 T 23-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CLI_RS12715 518d006fcfd7aa130e86a657376162de 258 Gene3D G3DSA:3.40.192.10 3 105 6.0E-37 T 23-04-2016 CLI_RS12715 518d006fcfd7aa130e86a657376162de 258 Gene3D G3DSA:3.40.50.720 106 250 9.2E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS12715 518d006fcfd7aa130e86a657376162de 258 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 1.7E-27 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS12715 518d006fcfd7aa130e86a657376162de 258 PANTHER PTHR21089 5 249 3.3E-83 T 23-04-2016 CLI_RS12715 518d006fcfd7aa130e86a657376162de 258 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 257 26.924 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS12715 518d006fcfd7aa130e86a657376162de 258 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 115 200 1.9E-5 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CLI_RS12715 518d006fcfd7aa130e86a657376162de 258 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 249 4.2E-64 T 23-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS12715 518d006fcfd7aa130e86a657376162de 258 SUPERFAMILY SSF53223 2 100 4.32E-27 T 23-04-2016 CLI_RS12715 518d006fcfd7aa130e86a657376162de 258 SUPERFAMILY SSF51735 101 250 5.07E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS14915 8b9e69f632f2271b8634fa1111291f2f 210 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 203 1.7E-30 T 23-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 CLI_RS14915 8b9e69f632f2271b8634fa1111291f2f 210 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 205 22.945 T 23-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 CLI_RS14915 8b9e69f632f2271b8634fa1111291f2f 210 PANTHER PTHR34108:SF1 1 208 1.7E-58 T 23-04-2016 CLI_RS14915 8b9e69f632f2271b8634fa1111291f2f 210 Gene3D G3DSA:2.160.20.70 87 204 1.7E-37 T 23-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 CLI_RS14915 8b9e69f632f2271b8634fa1111291f2f 210 PANTHER PTHR34108 1 208 1.7E-58 T 23-04-2016 CLI_RS14915 8b9e69f632f2271b8634fa1111291f2f 210 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 103 200 5.5E-31 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CLI_RS14915 8b9e69f632f2271b8634fa1111291f2f 210 SUPERFAMILY SSF63848 101 204 6.93E-32 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 Pfam PF10502 Signal peptidase, peptidase S26 96 188 3.5E-10 T 23-04-2016 IPR019533 Peptidase S26 CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 ProSitePatterns PS00761 Signal peptidases I signature 3. 160 173 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 30 46 1.7E-15 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 109 121 1.7E-15 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 155 174 1.7E-15 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 ProSitePatterns PS00760 Signal peptidases I lysine active site. 111 123 - T 23-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 PANTHER PTHR12383 4 75 7.0E-50 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 PANTHER PTHR12383 107 202 7.0E-50 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 SUPERFAMILY SSF51306 104 201 6.63E-42 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 SUPERFAMILY SSF51306 31 76 6.63E-42 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 Gene3D G3DSA:2.10.109.10 155 201 3.2E-34 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 Gene3D G3DSA:2.10.109.10 27 119 3.2E-34 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 PANTHER PTHR12383:SF14 4 75 7.0E-50 T 23-04-2016 CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 PANTHER PTHR12383:SF14 107 202 7.0E-50 T 23-04-2016 CLI_RS03095 40d8959c9262aaccebaafc853f896d60 202 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 13 196 3.2E-43 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLI_RS11110 5903512a7941daa678c89be70bd87a46 212 SMART SM00382 29 184 0.0048 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS11110 5903512a7941daa678c89be70bd87a46 212 PANTHER PTHR30134:SF2 1 210 5.4E-111 T 23-04-2016 CLI_RS11110 5903512a7941daa678c89be70bd87a46 212 Gene3D G3DSA:3.40.50.300 29 199 4.7E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11110 5903512a7941daa678c89be70bd87a46 212 PANTHER PTHR30134 1 210 5.4E-111 T 23-04-2016 CLI_RS11110 5903512a7941daa678c89be70bd87a46 212 PIRSF PIRSF005624 1 211 2.3E-77 T 23-04-2016 CLI_RS11110 5903512a7941daa678c89be70bd87a46 212 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 32 193 2.7E-28 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLI_RS11110 5903512a7941daa678c89be70bd87a46 212 SUPERFAMILY SSF52540 2 210 6.77E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11110 5903512a7941daa678c89be70bd87a46 212 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 2 210 6.2E-74 T 23-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 CLI_RS05170 2e4c1b04cebbfe69cf6734862183648f 284 SUPERFAMILY SSF55729 193 272 1.02E-8 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05170 2e4c1b04cebbfe69cf6734862183648f 284 Gene3D G3DSA:3.40.630.30 179 277 4.0E-12 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05170 2e4c1b04cebbfe69cf6734862183648f 284 Pfam PF13673 Acetyltransferase (GNAT) domain 195 273 1.3E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS05170 2e4c1b04cebbfe69cf6734862183648f 284 SUPERFAMILY SSF55729 39 215 1.07E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05170 2e4c1b04cebbfe69cf6734862183648f 284 PANTHER PTHR23091 4 140 5.8E-14 T 23-04-2016 CLI_RS05170 2e4c1b04cebbfe69cf6734862183648f 284 Gene3D G3DSA:3.40.630.30 12 150 3.6E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05170 2e4c1b04cebbfe69cf6734862183648f 284 Pfam PF00583 Acetyltransferase (GNAT) family 56 134 1.2E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 Gene3D G3DSA:3.40.50.720 4 169 3.9E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 23-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 PANTHER PTHR32092:SF5 2 440 4.7E-271 T 23-04-2016 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 Gene3D G3DSA:3.90.110.10 170 436 2.9E-94 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 SUPERFAMILY SSF56327 173 440 7.38E-90 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 7.4E-48 T 23-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 4.3E-52 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 4.3E-52 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 4.3E-52 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 4.3E-52 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 4.3E-52 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 4.3E-52 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 4.3E-52 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 2.3E-73 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 SUPERFAMILY SSF51735 4 168 1.49E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS17205 c84a2b08b5c19fe2f69993d3553521e4 445 PANTHER PTHR32092 2 440 4.7E-271 T 23-04-2016 CLI_RS02130 27eb4ef8d60303ab9c0a5a6ced4b9ab3 503 SUPERFAMILY SSF82171 290 364 7.06E-5 T 23-04-2016 CLI_RS02130 27eb4ef8d60303ab9c0a5a6ced4b9ab3 503 Pfam PF13205 Bacterial Ig-like domain 413 500 2.6E-6 T 23-04-2016 IPR032812 SbsA, Ig-like domain CLI_RS02130 27eb4ef8d60303ab9c0a5a6ced4b9ab3 503 Pfam PF16472 Domain of unknown function (DUF5050) 327 387 5.4E-9 T 23-04-2016 IPR032485 Domain of unknown function DUF5050 CLI_RS02130 27eb4ef8d60303ab9c0a5a6ced4b9ab3 503 SUPERFAMILY SSF54001 117 309 3.92E-15 T 23-04-2016 CLI_RS02130 27eb4ef8d60303ab9c0a5a6ced4b9ab3 503 PANTHER PTHR11039:SF44 5 464 8.5E-14 T 23-04-2016 CLI_RS02130 27eb4ef8d60303ab9c0a5a6ced4b9ab3 503 PANTHER PTHR11039 5 464 8.5E-14 T 23-04-2016 CLI_RS02130 27eb4ef8d60303ab9c0a5a6ced4b9ab3 503 Gene3D G3DSA:2.120.10.30 289 361 4.1E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 Pfam PF00579 tRNA synthetases class I (W and Y) 30 319 3.0E-84 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 Gene3D G3DSA:3.40.50.620 2 230 3.6E-99 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 406 44.082 T 23-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 5.0E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 5.0E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 5.0E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 5.0E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 PANTHER PTHR11766 3 404 2.9E-193 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 406 4.7E-137 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 Gene3D G3DSA:1.10.240.10 231 312 1.7E-40 T 23-04-2016 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 SUPERFAMILY SSF55174 303 406 2.22E-18 T 23-04-2016 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 Gene3D G3DSA:3.10.290.10 313 406 4.4E-31 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 SUPERFAMILY SSF52374 3 319 1.43E-105 T 23-04-2016 CLI_RS17005 92cc01b710920195798d0de33af5e6ea 407 Pfam PF01479 S4 domain 343 385 1.3E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS14235 f57dd88419db3b524bce2685bd4e8d3c 453 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 412 - T 23-04-2016 IPR030390 RNA methyltransferase TrmA, active site CLI_RS14235 f57dd88419db3b524bce2685bd4e8d3c 453 PANTHER PTHR11061:SF30 1 453 4.3E-168 T 23-04-2016 CLI_RS14235 f57dd88419db3b524bce2685bd4e8d3c 453 Gene3D G3DSA:2.40.50.140 1 77 4.0E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS14235 f57dd88419db3b524bce2685bd4e8d3c 453 Pfam PF01938 TRAM domain 3 57 5.1E-7 T 23-04-2016 IPR002792 TRAM domain CLI_RS14235 f57dd88419db3b524bce2685bd4e8d3c 453 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 87 449 1.1E-25 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CLI_RS14235 f57dd88419db3b524bce2685bd4e8d3c 453 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 17 443 9.9E-105 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CLI_RS14235 f57dd88419db3b524bce2685bd4e8d3c 453 SUPERFAMILY SSF50249 2 56 4.45E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS14235 f57dd88419db3b524bce2685bd4e8d3c 453 SUPERFAMILY SSF53335 67 450 2.0E-77 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS14235 f57dd88419db3b524bce2685bd4e8d3c 453 Gene3D G3DSA:3.40.50.150 255 449 8.2E-66 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS14235 f57dd88419db3b524bce2685bd4e8d3c 453 PANTHER PTHR11061 1 453 4.3E-168 T 23-04-2016 CLI_RS14235 f57dd88419db3b524bce2685bd4e8d3c 453 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 433 443 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site CLI_RS10360 e757b2db6c0f7eedc246c29c6f2abe56 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 247 270 0.0023 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS10360 e757b2db6c0f7eedc246c29c6f2abe56 353 SUPERFAMILY SSF53448 1 303 8.34E-76 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10360 e757b2db6c0f7eedc246c29c6f2abe56 353 PANTHER PTHR22572 2 333 2.7E-146 T 23-04-2016 CLI_RS10360 e757b2db6c0f7eedc246c29c6f2abe56 353 Pfam PF00483 Nucleotidyl transferase 2 234 1.0E-54 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CLI_RS10360 e757b2db6c0f7eedc246c29c6f2abe56 353 Gene3D G3DSA:3.90.550.10 1 286 4.3E-80 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10360 e757b2db6c0f7eedc246c29c6f2abe56 353 PANTHER PTHR22572:SF13 2 333 2.7E-146 T 23-04-2016 CLI_RS10360 e757b2db6c0f7eedc246c29c6f2abe56 353 TIGRFAM TIGR01208 rmlA_long: glucose-1-phosphate thymidylyltransferase 2 353 1.1E-131 T 23-04-2016 IPR005908 Glucose-1-phosphate thymidylyltransferase, long form CLI_RS02630 c07130b97c60760f280570a26813086b 742 PANTHER PTHR24093 2 741 0.0 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 SUPERFAMILY SSF81665 342 437 1.44E-10 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 SUPERFAMILY SSF81665 192 245 1.44E-10 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 SUPERFAMILY SSF81665 687 716 1.44E-10 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 SUPERFAMILY SSF56784 441 461 2.27E-55 T 23-04-2016 IPR023214 HAD-like domain CLI_RS02630 c07130b97c60760f280570a26813086b 742 SUPERFAMILY SSF56784 499 738 2.27E-55 T 23-04-2016 IPR023214 HAD-like domain CLI_RS02630 c07130b97c60760f280570a26813086b 742 PANTHER PTHR24093:SF210 2 741 0.0 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 Gene3D G3DSA:3.40.1110.10 434 462 6.9E-4 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS02630 c07130b97c60760f280570a26813086b 742 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 192 742 1.0E-150 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 Pfam PF00702 haloacid dehalogenase-like hydrolase 440 651 1.5E-33 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 SUPERFAMILY SSF55008 2 72 8.51E-11 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS02630 c07130b97c60760f280570a26813086b 742 Gene3D G3DSA:3.40.50.1000 559 707 1.2E-42 T 23-04-2016 IPR023214 HAD-like domain CLI_RS02630 c07130b97c60760f280570a26813086b 742 Gene3D G3DSA:3.40.1110.10 463 558 8.6E-12 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS02630 c07130b97c60760f280570a26813086b 742 Pfam PF00403 Heavy-metal-associated domain 9 61 5.8E-12 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS02630 c07130b97c60760f280570a26813086b 742 Gene3D G3DSA:2.70.150.10 192 342 1.3E-25 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS02630 c07130b97c60760f280570a26813086b 742 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 213 716 1.2E-72 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS02630 c07130b97c60760f280570a26813086b 742 Gene3D G3DSA:3.30.70.100 4 75 1.3E-12 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 581 591 4.3E-19 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 443 457 4.3E-19 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 637 656 4.3E-19 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 661 673 4.3E-19 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 291 305 4.3E-19 T 23-04-2016 CLI_RS02630 c07130b97c60760f280570a26813086b 742 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 445 451 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CLI_RS02630 c07130b97c60760f280570a26813086b 742 Pfam PF00122 E1-E2 ATPase 213 434 3.0E-61 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS02630 c07130b97c60760f280570a26813086b 742 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 192 739 1.0E-167 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CLI_RS02630 c07130b97c60760f280570a26813086b 742 PRINTS PR00941 Cadmium-transporting ATPase signature 7 16 5.5E-7 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CLI_RS02630 c07130b97c60760f280570a26813086b 742 PRINTS PR00941 Cadmium-transporting ATPase signature 226 246 5.5E-7 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CLI_RS02630 c07130b97c60760f280570a26813086b 742 PRINTS PR00941 Cadmium-transporting ATPase signature 326 340 5.5E-7 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CLI_RS02630 c07130b97c60760f280570a26813086b 742 PRINTS PR00941 Cadmium-transporting ATPase signature 307 323 5.5E-7 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CLI_RS02630 c07130b97c60760f280570a26813086b 742 SUPERFAMILY SSF81653 244 339 1.2E-22 T 23-04-2016 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 Gene3D G3DSA:1.20.1270.20 175 249 1.7E-31 T 23-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 PANTHER PTHR30109 133 570 6.3E-303 T 23-04-2016 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 PANTHER PTHR30109 1 109 6.3E-303 T 23-04-2016 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 PIRSF PIRSF000076 3 570 5.1E-273 T 23-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 Gene3D G3DSA:1.20.1270.20 1 174 4.9E-46 T 23-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 Gene3D G3DSA:3.40.50.2030 251 399 3.5E-73 T 23-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 PANTHER PTHR30109:SF0 133 570 6.3E-303 T 23-04-2016 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 PANTHER PTHR30109:SF0 1 109 6.3E-303 T 23-04-2016 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 SUPERFAMILY SSF56821 3 569 1.68E-212 T 23-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 Pfam PF03063 Prismane/CO dehydrogenase family 3 566 1.2E-187 T 23-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 Hamap MF_00069 Hydroxylamine reductase [hcp]. 3 570 24.315 T 23-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 3 568 2.7E-240 T 23-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS13880 a43f7801cd0095c09b611ec525bd85ce 570 Gene3D G3DSA:3.40.50.2030 400 568 3.8E-76 T 23-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS03930 e070ad4fe0aa792ac5039e2224e49c2a 79 Pfam PF00403 Heavy-metal-associated domain 14 75 1.8E-12 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS03930 e070ad4fe0aa792ac5039e2224e49c2a 79 SUPERFAMILY SSF55008 10 77 1.7E-18 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS03930 e070ad4fe0aa792ac5039e2224e49c2a 79 ProSitePatterns PS00050 Ribosomal protein L23 signature. 48 63 - T 23-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site CLI_RS03930 e070ad4fe0aa792ac5039e2224e49c2a 79 Gene3D G3DSA:3.30.70.100 11 77 1.3E-19 T 23-04-2016 CLI_RS03930 e070ad4fe0aa792ac5039e2224e49c2a 79 PRINTS PR00946 Mercury scavenger protein signature 65 79 1.5E-9 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CLI_RS03930 e070ad4fe0aa792ac5039e2224e49c2a 79 PRINTS PR00946 Mercury scavenger protein signature 8 19 1.5E-9 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CLI_RS03930 e070ad4fe0aa792ac5039e2224e49c2a 79 PRINTS PR00946 Mercury scavenger protein signature 19 35 1.5E-9 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CLI_RS03930 e070ad4fe0aa792ac5039e2224e49c2a 79 PRINTS PR00946 Mercury scavenger protein signature 35 50 1.5E-9 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CLI_RS04855 761bee01b7acca25eecec52b38b682e3 227 PANTHER PTHR34857:SF1 3 227 1.2E-65 T 23-04-2016 CLI_RS04855 761bee01b7acca25eecec52b38b682e3 227 PANTHER PTHR34857 3 227 1.2E-65 T 23-04-2016 CLI_RS04855 761bee01b7acca25eecec52b38b682e3 227 Pfam PF02361 Cobalt transport protein 21 194 4.4E-16 T 23-04-2016 IPR003339 ABC/ECF transporter, transmembrane component CLI_RS04855 761bee01b7acca25eecec52b38b682e3 227 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 12 190 6.2E-33 T 23-04-2016 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 CLI_RS00945 400fd6e9819f69d7f8db4a8975a612bf 248 PANTHER PTHR21666 54 247 1.1E-20 T 23-04-2016 CLI_RS00945 400fd6e9819f69d7f8db4a8975a612bf 248 Pfam PF01551 Peptidase family M23 143 242 8.5E-22 T 23-04-2016 IPR016047 Peptidase M23 CLI_RS00945 400fd6e9819f69d7f8db4a8975a612bf 248 PANTHER PTHR21666:SF200 54 247 1.1E-20 T 23-04-2016 CLI_RS00945 400fd6e9819f69d7f8db4a8975a612bf 248 SUPERFAMILY SSF51261 61 246 1.41E-27 T 23-04-2016 IPR011055 Duplicated hybrid motif CLI_RS00945 400fd6e9819f69d7f8db4a8975a612bf 248 Gene3D G3DSA:2.70.70.10 87 247 1.5E-31 T 23-04-2016 CLI_RS18125 abd35583c65dbba6d9a4b8a0abc84c79 557 SUPERFAMILY SSF52540 5 555 1.53E-250 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18125 abd35583c65dbba6d9a4b8a0abc84c79 557 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 2 557 49.202 T 23-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CLI_RS18125 abd35583c65dbba6d9a4b8a0abc84c79 557 Gene3D G3DSA:3.40.50.300 249 441 2.7E-153 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18125 abd35583c65dbba6d9a4b8a0abc84c79 557 Gene3D G3DSA:3.40.50.300 13 129 2.7E-153 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18125 abd35583c65dbba6d9a4b8a0abc84c79 557 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 104 114 - T 23-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CLI_RS18125 abd35583c65dbba6d9a4b8a0abc84c79 557 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 329 340 - T 23-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CLI_RS18125 abd35583c65dbba6d9a4b8a0abc84c79 557 Gene3D G3DSA:3.30.1510.10 130 248 1.5E-54 T 23-04-2016 CLI_RS18125 abd35583c65dbba6d9a4b8a0abc84c79 557 Pfam PF01268 Formate--tetrahydrofolate ligase 3 557 4.5E-276 T 23-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CLI_RS18125 abd35583c65dbba6d9a4b8a0abc84c79 557 PANTHER PTHR10025 4 556 0.0 T 23-04-2016 CLI_RS18125 abd35583c65dbba6d9a4b8a0abc84c79 557 Gene3D G3DSA:3.10.410.10 445 533 7.9E-40 T 23-04-2016 CLI_RS02275 c7c99fa59d885d7210a55428af139028 326 PANTHER PTHR18964:SF114 12 62 1.5E-48 T 23-04-2016 CLI_RS02275 c7c99fa59d885d7210a55428af139028 326 PANTHER PTHR18964:SF114 78 259 1.5E-48 T 23-04-2016 CLI_RS02275 c7c99fa59d885d7210a55428af139028 326 Gene3D G3DSA:2.60.120.10 224 310 1.7E-18 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS02275 c7c99fa59d885d7210a55428af139028 326 PANTHER PTHR18964 12 62 1.5E-48 T 23-04-2016 CLI_RS02275 c7c99fa59d885d7210a55428af139028 326 PANTHER PTHR18964 78 259 1.5E-48 T 23-04-2016 CLI_RS02275 c7c99fa59d885d7210a55428af139028 326 SUPERFAMILY SSF51182 1 311 1.85E-75 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS02275 c7c99fa59d885d7210a55428af139028 326 PIRSF PIRSF036894 1 310 5.9E-91 T 23-04-2016 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 CLI_RS02275 c7c99fa59d885d7210a55428af139028 326 Gene3D G3DSA:2.60.120.10 1 210 3.7E-61 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS02275 c7c99fa59d885d7210a55428af139028 326 Pfam PF01238 Phosphomannose isomerase type I 5 103 1.0E-12 T 23-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 CLI_RS04005 55ef0f2d62a3d25e5ad4caf6d6c0a637 107 PANTHER PTHR33154:SF3 4 100 1.3E-46 T 23-04-2016 CLI_RS04005 55ef0f2d62a3d25e5ad4caf6d6c0a637 107 Gene3D G3DSA:1.10.10.10 4 93 3.5E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04005 55ef0f2d62a3d25e5ad4caf6d6c0a637 107 SMART SM00418 10 88 5.0E-28 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS04005 55ef0f2d62a3d25e5ad4caf6d6c0a637 107 Pfam PF01022 Bacterial regulatory protein, arsR family 17 63 6.6E-17 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS04005 55ef0f2d62a3d25e5ad4caf6d6c0a637 107 SUPERFAMILY SSF46785 4 88 2.93E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04005 55ef0f2d62a3d25e5ad4caf6d6c0a637 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 31 42 4.3E-21 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS04005 55ef0f2d62a3d25e5ad4caf6d6c0a637 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 4.3E-21 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS04005 55ef0f2d62a3d25e5ad4caf6d6c0a637 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 4.3E-21 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS04005 55ef0f2d62a3d25e5ad4caf6d6c0a637 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 4.3E-21 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS04005 55ef0f2d62a3d25e5ad4caf6d6c0a637 107 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 33 51 - T 23-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 CLI_RS04005 55ef0f2d62a3d25e5ad4caf6d6c0a637 107 PANTHER PTHR33154 4 100 1.3E-46 T 23-04-2016 CLI_RS11050 eb5a58e4ffd77674ad96735c20cc9a33 445 PANTHER PTHR30304:SF0 147 445 6.9E-105 T 23-04-2016 CLI_RS11050 eb5a58e4ffd77674ad96735c20cc9a33 445 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 258 429 8.1E-27 T 23-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain CLI_RS11050 eb5a58e4ffd77674ad96735c20cc9a33 445 SUPERFAMILY SSF142764 5 438 1.96E-83 T 23-04-2016 CLI_RS11050 eb5a58e4ffd77674ad96735c20cc9a33 445 PANTHER PTHR30304 147 445 6.9E-105 T 23-04-2016 CLI_RS11050 eb5a58e4ffd77674ad96735c20cc9a33 445 Pfam PF07005 Putative sugar-binding N-terminal domain 5 229 4.2E-53 T 23-04-2016 IPR010737 Putative sugar-binding, N-terminal domain CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 SUPERFAMILY SSF55604 6 80 9.81E-24 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 478 602 1.7E-50 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 Gene3D G3DSA:3.30.1360.60 1 80 1.1E-30 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 Pfam PF02378 Phosphotransferase system, EIIC 108 383 2.0E-32 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 Pfam PF00367 phosphotransferase system, EIIB 9 41 4.8E-17 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 PANTHER PTHR30175 1 574 0.0 T 23-04-2016 CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 480 599 4.6E-43 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 Gene3D G3DSA:2.70.70.10 472 624 8.1E-58 T 23-04-2016 CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 PANTHER PTHR30175:SF6 1 574 0.0 T 23-04-2016 CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 623 7.3E-224 T 23-04-2016 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 541 553 - T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS04635 31b2c348a60d8a68a2f8385b523e1183 625 SUPERFAMILY SSF51261 472 623 1.66E-53 T 23-04-2016 IPR011055 Duplicated hybrid motif CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 SUPERFAMILY SSF53738 210 316 1.92E-19 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 246 2.9E-7 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 2.9E-7 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 2.9E-7 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 507 553 1.3E-9 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 SUPERFAMILY SSF53738 29 234 6.67E-48 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 Gene3D G3DSA:3.30.310.50 477 568 6.1E-25 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 PANTHER PTHR22573 496 573 2.6E-243 T 23-04-2016 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 PANTHER PTHR22573 19 480 2.6E-243 T 23-04-2016 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 SUPERFAMILY SSF53738 302 452 4.32E-29 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 Gene3D G3DSA:3.40.120.10 23 217 4.1E-62 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 447 5.6E-20 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 313 7.3E-22 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 Gene3D G3DSA:3.40.120.10 307 451 9.8E-33 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 Gene3D G3DSA:3.40.120.10 228 306 2.8E-21 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 SUPERFAMILY SSF55957 441 478 3.01E-15 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 SUPERFAMILY SSF55957 510 570 3.01E-15 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 180 3.1E-43 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 PANTHER PTHR22573:SF54 496 573 2.6E-243 T 23-04-2016 CLI_RS18705 1fe338a7a06fbc10ea4829aae544d745 573 PANTHER PTHR22573:SF54 19 480 2.6E-243 T 23-04-2016 CLI_RS07130 bead3495d2e071a06d43950284fda5bf 335 Gene3D G3DSA:3.40.190.10 50 115 1.4E-4 T 23-04-2016 CLI_RS07130 bead3495d2e071a06d43950284fda5bf 335 PIRSF PIRSF027386 1 334 5.5E-128 T 23-04-2016 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type CLI_RS07130 bead3495d2e071a06d43950284fda5bf 335 SUPERFAMILY SSF53850 46 317 1.11E-36 T 23-04-2016 CLI_RS07130 bead3495d2e071a06d43950284fda5bf 335 PANTHER PTHR30024:SF1 39 316 7.4E-47 T 23-04-2016 CLI_RS07130 bead3495d2e071a06d43950284fda5bf 335 PANTHER PTHR30024 39 316 7.4E-47 T 23-04-2016 CLI_RS07130 bead3495d2e071a06d43950284fda5bf 335 Gene3D G3DSA:3.40.190.10 123 255 1.8E-15 T 23-04-2016 CLI_RS07130 bead3495d2e071a06d43950284fda5bf 335 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 73 208 6.5E-11 T 23-04-2016 CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 SUPERFAMILY SSF48029 8 107 1.96E-20 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 Gene3D G3DSA:1.10.220.30 9 65 1.4E-14 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 Pfam PF14841 FliG middle domain 118 191 7.5E-30 T 23-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 SUPERFAMILY SSF48029 117 328 3.01E-66 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 Pfam PF14842 FliG N-terminal domain 6 109 2.9E-32 T 23-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 251 271 3.4E-74 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 275 301 3.4E-74 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 117 140 3.4E-74 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 229 249 3.4E-74 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 198 223 3.4E-74 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 36 62 3.4E-74 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 7 23 3.4E-74 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 5 337 1.5E-128 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 PIRSF PIRSF003161 1 337 6.1E-117 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 PANTHER PTHR30534 4 336 1.8E-108 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 Gene3D G3DSA:1.10.220.30 75 198 2.1E-30 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 Gene3D G3DSA:1.10.220.30 199 336 2.8E-41 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 Pfam PF01706 FliG C-terminal domain 220 327 8.4E-41 T 23-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal CLI_RS13330 9f5eb2eb827f34997cc760880e2a7dd8 337 PANTHER PTHR30534:SF0 4 336 1.8E-108 T 23-04-2016 CLI_RS17650 b2067471db181387f5cb80316b489995 234 PANTHER PTHR30032 32 234 7.8E-67 T 23-04-2016 CLI_RS17650 b2067471db181387f5cb80316b489995 234 SUPERFAMILY SSF53187 38 231 1.48E-49 T 23-04-2016 CLI_RS17650 b2067471db181387f5cb80316b489995 234 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 40 226 5.0E-50 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS17650 b2067471db181387f5cb80316b489995 234 Gene3D G3DSA:3.40.630.40 38 231 1.9E-54 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS17650 b2067471db181387f5cb80316b489995 234 SMART SM00646 119 227 2.0E-19 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS17650 b2067471db181387f5cb80316b489995 234 PANTHER PTHR30032:SF6 32 234 7.8E-67 T 23-04-2016 CLI_RS17650 b2067471db181387f5cb80316b489995 234 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 38 229 3.0E-85 T 23-04-2016 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD CLI_RS16510 ad8642e3cc5f120fb286d5f9bab78a7c 419 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 76 419 1.9E-91 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS16510 ad8642e3cc5f120fb286d5f9bab78a7c 419 PANTHER PTHR30548 26 419 3.0E-243 T 23-04-2016 CLI_RS16510 ad8642e3cc5f120fb286d5f9bab78a7c 419 PANTHER PTHR30548:SF1 26 419 3.0E-243 T 23-04-2016 CLI_RS07800 ed3da9068ac49f586f54b20af9e6e49b 453 PANTHER PTHR30061:SF19 1 448 2.7E-173 T 23-04-2016 CLI_RS07800 ed3da9068ac49f586f54b20af9e6e49b 453 PANTHER PTHR30061 1 448 2.7E-173 T 23-04-2016 CLI_RS07800 ed3da9068ac49f586f54b20af9e6e49b 453 Pfam PF13416 Bacterial extracellular solute-binding protein 66 382 8.4E-45 T 23-04-2016 CLI_RS07800 ed3da9068ac49f586f54b20af9e6e49b 453 Gene3D G3DSA:3.40.190.10 56 184 1.8E-14 T 23-04-2016 CLI_RS07800 ed3da9068ac49f586f54b20af9e6e49b 453 Gene3D G3DSA:3.40.190.10 185 368 9.5E-37 T 23-04-2016 CLI_RS07800 ed3da9068ac49f586f54b20af9e6e49b 453 SUPERFAMILY SSF53850 47 440 3.8E-76 T 23-04-2016 CLI_RS05125 1a0af812499eddd919e0000c35d29a78 586 Gene3D G3DSA:3.40.50.10440 11 182 9.3E-72 T 23-04-2016 CLI_RS05125 1a0af812499eddd919e0000c35d29a78 586 SUPERFAMILY SSF82549 1 331 2.49E-121 T 23-04-2016 CLI_RS05125 1a0af812499eddd919e0000c35d29a78 586 PANTHER PTHR28629 1 586 0.0 T 23-04-2016 CLI_RS05125 1a0af812499eddd919e0000c35d29a78 586 Gene3D G3DSA:3.30.1180.20 183 331 3.4E-56 T 23-04-2016 CLI_RS05125 1a0af812499eddd919e0000c35d29a78 586 PANTHER PTHR28629:SF2 1 586 0.0 T 23-04-2016 CLI_RS05125 1a0af812499eddd919e0000c35d29a78 586 Pfam PF02733 Dak1 domain 18 328 1.2E-127 T 23-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 CLI_RS05125 1a0af812499eddd919e0000c35d29a78 586 SMART SM01120 400 583 1.4E-58 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 CLI_RS05125 1a0af812499eddd919e0000c35d29a78 586 Pfam PF02734 DAK2 domain 401 582 6.6E-49 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 CLI_RS05125 1a0af812499eddd919e0000c35d29a78 586 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 329 4.5E-136 T 23-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 CLI_RS05125 1a0af812499eddd919e0000c35d29a78 586 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 378 581 1.5E-41 T 23-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- CLI_RS05125 1a0af812499eddd919e0000c35d29a78 586 SUPERFAMILY SSF101473 359 583 4.58E-45 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 Gene3D G3DSA:1.10.150.20 246 313 2.5E-31 T 23-04-2016 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 PANTHER PTHR32108 1 315 7.8E-145 T 23-04-2016 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 SUPERFAMILY SSF56553 50 171 7.06E-40 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 SUPERFAMILY SSF47789 247 311 2.35E-23 T 23-04-2016 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 SMART SM00662 20 227 5.9E-94 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 Gene3D G3DSA:2.170.120.12 65 170 2.7E-41 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 SUPERFAMILY SSF55257 4 50 9.03E-33 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 SUPERFAMILY SSF55257 172 225 9.03E-33 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 304 1.0E-27 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 311 8.0E-23 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 151 5.8E-22 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 36.418 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 PANTHER PTHR32108:SF0 1 315 7.8E-145 T 23-04-2016 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 312 3.5E-120 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 6.3E-26 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17695 bf3eafaac6e45c455c2d6d264c3b3474 315 Gene3D G3DSA:3.30.1360.10 3 64 4.1E-13 T 23-04-2016 CLI_RS15720 4677b2c03c9410ab6f41442f206ccef0 309 PANTHER PTHR30465 1 305 8.9E-153 T 23-04-2016 CLI_RS15720 4677b2c03c9410ab6f41442f206ccef0 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 8.8E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS15720 4677b2c03c9410ab6f41442f206ccef0 309 PANTHER PTHR30465:SF74 1 305 8.9E-153 T 23-04-2016 CLI_RS15720 4677b2c03c9410ab6f41442f206ccef0 309 SUPERFAMILY SSF161098 91 292 1.94E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS15720 4677b2c03c9410ab6f41442f206ccef0 309 Gene3D G3DSA:1.10.3720.10 90 299 6.7E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06150 984e2d4dbf1bc82e258b16e5720c1c7a 356 Gene3D G3DSA:3.40.50.620 2 211 8.5E-87 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS06150 984e2d4dbf1bc82e258b16e5720c1c7a 356 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 355 41.028 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CLI_RS06150 984e2d4dbf1bc82e258b16e5720c1c7a 356 SUPERFAMILY SSF52402 2 246 2.21E-59 T 23-04-2016 CLI_RS06150 984e2d4dbf1bc82e258b16e5720c1c7a 356 PANTHER PTHR11933:SF10 2 356 1.2E-188 T 23-04-2016 CLI_RS06150 984e2d4dbf1bc82e258b16e5720c1c7a 356 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3 354 3.2E-113 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CLI_RS06150 984e2d4dbf1bc82e258b16e5720c1c7a 356 Gene3D G3DSA:2.40.30.10 277 356 8.8E-25 T 23-04-2016 CLI_RS06150 984e2d4dbf1bc82e258b16e5720c1c7a 356 Pfam PF03054 tRNA methyl transferase 3 354 1.2E-124 T 23-04-2016 CLI_RS06150 984e2d4dbf1bc82e258b16e5720c1c7a 356 Gene3D G3DSA:2.30.30.280 219 271 5.5E-16 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 CLI_RS06150 984e2d4dbf1bc82e258b16e5720c1c7a 356 PANTHER PTHR11933 2 356 1.2E-188 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CLI_RS16810 ae75c1ef2b96ad05983b1d53d2f65747 392 PANTHER PTHR37814 10 392 2.0E-185 T 23-04-2016 CLI_RS16810 ae75c1ef2b96ad05983b1d53d2f65747 392 PANTHER PTHR37814:SF1 10 392 2.0E-185 T 23-04-2016 CLI_RS11825 8ee80aadb285913788ae4dfc02b2b315 195 PANTHER PTHR41328 2 121 1.5E-17 T 23-04-2016 CLI_RS11825 8ee80aadb285913788ae4dfc02b2b315 195 PANTHER PTHR41328 141 174 1.5E-17 T 23-04-2016 CLI_RS11825 8ee80aadb285913788ae4dfc02b2b315 195 PANTHER PTHR41328:SF2 2 121 1.5E-17 T 23-04-2016 CLI_RS11825 8ee80aadb285913788ae4dfc02b2b315 195 PANTHER PTHR41328:SF2 141 174 1.5E-17 T 23-04-2016 CLI_RS11825 8ee80aadb285913788ae4dfc02b2b315 195 Pfam PF03592 Terminase small subunit 4 169 1.1E-38 T 23-04-2016 IPR005335 Terminase small subunit GO:0006323 CLI_RS17675 25137f978134299de6d1ab445075041b 267 PANTHER PTHR33514 1 267 2.5E-158 T 23-04-2016 CLI_RS17675 25137f978134299de6d1ab445075041b 267 PANTHER PTHR33514:SF2 1 267 2.5E-158 T 23-04-2016 CLI_RS17675 25137f978134299de6d1ab445075041b 267 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 265 36.499 T 23-04-2016 IPR024919 ECF transporter transmembrane protein EcfT GO:0005215|GO:0006810|GO:0016021 CLI_RS17675 25137f978134299de6d1ab445075041b 267 Pfam PF02361 Cobalt transport protein 15 235 5.4E-53 T 23-04-2016 IPR003339 ABC/ECF transporter, transmembrane component CLI_RS03340 acb3640f437d5116dfb7ef2637b820c9 109 PANTHER PTHR11586 2 108 1.7E-37 T 23-04-2016 CLI_RS03340 acb3640f437d5116dfb7ef2637b820c9 109 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 4 108 5.1E-49 T 23-04-2016 IPR008231 Probable chaperone CsaA CLI_RS03340 acb3640f437d5116dfb7ef2637b820c9 109 Pfam PF01588 Putative tRNA binding domain 12 106 2.5E-15 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 CLI_RS03340 acb3640f437d5116dfb7ef2637b820c9 109 Gene3D G3DSA:2.40.50.140 2 108 1.1E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS03340 acb3640f437d5116dfb7ef2637b820c9 109 SUPERFAMILY SSF50249 1 108 2.45E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 225 402 1.2E-37 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 42.922 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 2.2E-173 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 5.0E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 5.0E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 5.0E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 5.0E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 5.0E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 110 3.6E-30 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 SUPERFAMILY SSF46589 1 115 4.71E-28 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 SUPERFAMILY SSF55681 119 424 1.93E-103 T 23-04-2016 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 Gene3D G3DSA:1.10.287.40 1 107 1.7E-28 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 PIRSF PIRSF001529 1 426 6.3E-185 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 PANTHER PTHR11778 1 425 1.4E-221 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS00105 34dadd9447e80c0c1c53d569449ba66c 426 Gene3D G3DSA:3.30.930.10 108 423 8.3E-141 T 23-04-2016 CLI_RS06570 312146c3bfef2ad75608d1189d6d8272 403 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 403 173.56 T 23-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 CLI_RS06570 312146c3bfef2ad75608d1189d6d8272 403 Pfam PF01636 Phosphotransferase enzyme family 32 266 4.8E-11 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase CLI_RS06570 312146c3bfef2ad75608d1189d6d8272 403 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 33 402 1.1E-123 T 23-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 CLI_RS06570 312146c3bfef2ad75608d1189d6d8272 403 Gene3D G3DSA:3.90.1200.10 96 337 7.9E-14 T 23-04-2016 CLI_RS06570 312146c3bfef2ad75608d1189d6d8272 403 SUPERFAMILY SSF56112 3 395 5.41E-89 T 23-04-2016 IPR011009 Protein kinase-like domain CLI_RS06570 312146c3bfef2ad75608d1189d6d8272 403 PANTHER PTHR34273 1 403 2.1E-208 T 23-04-2016 CLI_RS06570 312146c3bfef2ad75608d1189d6d8272 403 PIRSF PIRSF031134 1 403 6.0E-145 T 23-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 CLI_RS06570 312146c3bfef2ad75608d1189d6d8272 403 PANTHER PTHR34273:SF2 1 403 2.1E-208 T 23-04-2016 CLI_RS02430 cf5045d45fc5a6b62759b32997225c83 263 SUPERFAMILY SSF54427 83 249 6.13E-23 T 23-04-2016 IPR032710 NTF2-like domain CLI_RS02430 cf5045d45fc5a6b62759b32997225c83 263 Pfam PF04280 Tim44-like domain 105 236 4.2E-9 T 23-04-2016 IPR007379 Tim44-like domain CLI_RS02430 cf5045d45fc5a6b62759b32997225c83 263 SMART SM00978 103 247 1.4E-29 T 23-04-2016 IPR007379 Tim44-like domain CLI_RS08395 4454b4d8985bc50537992f28f962dc77 527 SUPERFAMILY SSF53850 257 525 9.77E-70 T 23-04-2016 CLI_RS08395 4454b4d8985bc50537992f28f962dc77 527 PANTHER PTHR30177 1 202 2.1E-221 T 23-04-2016 CLI_RS08395 4454b4d8985bc50537992f28f962dc77 527 PANTHER PTHR30177 289 526 2.1E-221 T 23-04-2016 CLI_RS08395 4454b4d8985bc50537992f28f962dc77 527 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 198 8.2E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS08395 4454b4d8985bc50537992f28f962dc77 527 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 257 522 9.2E-66 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CLI_RS08395 4454b4d8985bc50537992f28f962dc77 527 SUPERFAMILY SSF161098 13 199 5.36E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS08395 4454b4d8985bc50537992f28f962dc77 527 PANTHER PTHR30177:SF4 1 202 2.1E-221 T 23-04-2016 CLI_RS08395 4454b4d8985bc50537992f28f962dc77 527 PANTHER PTHR30177:SF4 289 526 2.1E-221 T 23-04-2016 CLI_RS08395 4454b4d8985bc50537992f28f962dc77 527 Gene3D G3DSA:3.40.190.120 363 463 1.1E-35 T 23-04-2016 CLI_RS08395 4454b4d8985bc50537992f28f962dc77 527 Gene3D G3DSA:1.10.3720.10 12 198 1.5E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS08395 4454b4d8985bc50537992f28f962dc77 527 Gene3D G3DSA:3.40.190.10 470 526 5.0E-61 T 23-04-2016 CLI_RS08395 4454b4d8985bc50537992f28f962dc77 527 Gene3D G3DSA:3.40.190.10 256 362 5.0E-61 T 23-04-2016 CLI_RS00025 185e86b408ea082741b57aa90bccbacf 364 PANTHER PTHR32182:SF0 1 364 6.6E-68 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CLI_RS00025 185e86b408ea082741b57aa90bccbacf 364 PANTHER PTHR32182 1 364 6.6E-68 T 23-04-2016 CLI_RS00025 185e86b408ea082741b57aa90bccbacf 364 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 337 1.6E-14 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal CLI_RS00025 185e86b408ea082741b57aa90bccbacf 364 SUPERFAMILY SSF52540 1 363 4.63E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00025 185e86b408ea082741b57aa90bccbacf 364 ProSitePatterns PS00618 RecF protein signature 2. 305 323 - T 23-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CLI_RS00025 185e86b408ea082741b57aa90bccbacf 364 Gene3D G3DSA:3.40.50.300 1 171 3.9E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00025 185e86b408ea082741b57aa90bccbacf 364 Gene3D G3DSA:3.40.50.300 237 350 3.9E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00025 185e86b408ea082741b57aa90bccbacf 364 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 360 1.5E-104 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CLI_RS00025 185e86b408ea082741b57aa90bccbacf 364 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 364 90.205 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 6.2E-34 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 Gene3D G3DSA:3.40.50.300 20 173 2.1E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 326 1.6E-143 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 PANTHER PTHR13779 1 332 1.1E-182 T 23-04-2016 CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 11 235 3.6E-115 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 342 164.54 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 SMART SM00382 51 182 8.9E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 Gene3D G3DSA:1.10.8.60 183 255 3.1E-31 T 23-04-2016 CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 SUPERFAMILY SSF52540 20 251 5.29E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 Gene3D G3DSA:1.10.10.10 257 327 4.7E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 PANTHER PTHR13779:SF25 1 332 1.1E-182 T 23-04-2016 CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 SUPERFAMILY SSF46785 257 328 8.43E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS15295 f8f0367c87ea33bcfbf08ea63d081559 342 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 332 1.0E-31 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CLI_RS00720 b5e7e0c759aa63eccefd7dc249a753e1 520 PANTHER PTHR21666:SF197 425 520 4.8E-15 T 23-04-2016 CLI_RS00720 b5e7e0c759aa63eccefd7dc249a753e1 520 Gene3D G3DSA:3.10.350.10 469 516 3.7E-18 T 23-04-2016 IPR018392 LysM domain CLI_RS00720 b5e7e0c759aa63eccefd7dc249a753e1 520 SMART SM00257 471 515 1.4E-17 T 23-04-2016 IPR018392 LysM domain CLI_RS00720 b5e7e0c759aa63eccefd7dc249a753e1 520 SUPERFAMILY SSF54106 470 515 7.98E-13 T 23-04-2016 IPR018392 LysM domain CLI_RS00720 b5e7e0c759aa63eccefd7dc249a753e1 520 Pfam PF12673 Domain of unknown function (DUF3794) 37 119 1.1E-13 T 23-04-2016 IPR024300 Domain of unknown function DUF3794 CLI_RS00720 b5e7e0c759aa63eccefd7dc249a753e1 520 Pfam PF12673 Domain of unknown function (DUF3794) 190 267 1.5E-9 T 23-04-2016 IPR024300 Domain of unknown function DUF3794 CLI_RS00720 b5e7e0c759aa63eccefd7dc249a753e1 520 Pfam PF12673 Domain of unknown function (DUF3794) 346 426 3.4E-18 T 23-04-2016 IPR024300 Domain of unknown function DUF3794 CLI_RS00720 b5e7e0c759aa63eccefd7dc249a753e1 520 PANTHER PTHR21666 425 520 4.8E-15 T 23-04-2016 CLI_RS00720 b5e7e0c759aa63eccefd7dc249a753e1 520 Pfam PF01476 LysM domain 472 515 8.5E-16 T 23-04-2016 IPR018392 LysM domain CLI_RS13575 d64ab27571a38264ee3773dd29b60829 273 Pfam PF00700 Bacterial flagellin C-terminal helical region 187 272 2.1E-30 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS13575 d64ab27571a38264ee3773dd29b60829 273 PRINTS PR00207 Flagellin signature 35 52 2.1E-25 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLI_RS13575 d64ab27571a38264ee3773dd29b60829 273 PRINTS PR00207 Flagellin signature 109 132 2.1E-25 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLI_RS13575 d64ab27571a38264ee3773dd29b60829 273 PRINTS PR00207 Flagellin signature 74 93 2.1E-25 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLI_RS13575 d64ab27571a38264ee3773dd29b60829 273 PANTHER PTHR30244 1 273 3.5E-125 T 23-04-2016 CLI_RS13575 d64ab27571a38264ee3773dd29b60829 273 PANTHER PTHR30244:SF1 1 273 3.5E-125 T 23-04-2016 CLI_RS13575 d64ab27571a38264ee3773dd29b60829 273 Gene3D G3DSA:1.20.1330.10 52 229 1.7E-67 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS13575 d64ab27571a38264ee3773dd29b60829 273 SUPERFAMILY SSF64518 1 273 3.14E-93 T 23-04-2016 CLI_RS13575 d64ab27571a38264ee3773dd29b60829 273 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 2.6E-41 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS13545 e8328efc4eadba4bcf97943115a75705 343 Gene3D G3DSA:3.20.20.70 5 265 1.2E-95 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS13545 e8328efc4eadba4bcf97943115a75705 343 Pfam PF08666 SAF domain 277 330 2.0E-7 T 23-04-2016 IPR013974 SAF domain CLI_RS13545 e8328efc4eadba4bcf97943115a75705 343 Gene3D G3DSA:3.90.1210.10 277 333 3.2E-15 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CLI_RS13545 e8328efc4eadba4bcf97943115a75705 343 PANTHER PTHR23416 4 285 7.5E-93 T 23-04-2016 CLI_RS13545 e8328efc4eadba4bcf97943115a75705 343 Pfam PF03102 NeuB family 37 265 9.1E-76 T 23-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 CLI_RS13545 e8328efc4eadba4bcf97943115a75705 343 SUPERFAMILY SSF51569 3 286 1.59E-84 T 23-04-2016 CLI_RS13545 e8328efc4eadba4bcf97943115a75705 343 SMART SM00858 276 334 3.5E-11 T 23-04-2016 IPR013974 SAF domain CLI_RS13545 e8328efc4eadba4bcf97943115a75705 343 PANTHER PTHR23416:SF62 4 285 7.5E-93 T 23-04-2016 CLI_RS13545 e8328efc4eadba4bcf97943115a75705 343 SUPERFAMILY SSF51269 274 333 1.16E-14 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CLI_RS05975 abb4308690828e99e3defb31379356c1 109 PANTHER PTHR14552 1 109 8.0E-44 T 23-04-2016 CLI_RS05975 abb4308690828e99e3defb31379356c1 109 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 31 99 3.4E-14 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLI_RS05975 abb4308690828e99e3defb31379356c1 109 PANTHER PTHR14552:SF14 1 109 8.0E-44 T 23-04-2016 CLI_RS05975 abb4308690828e99e3defb31379356c1 109 SUPERFAMILY SSF101386 1 99 3.27E-21 T 23-04-2016 CLI_RS05975 abb4308690828e99e3defb31379356c1 109 PIRSF PIRSF006639 1 108 2.1E-29 T 23-04-2016 IPR011379 NTP Pyrophosphohydrolase MazG-related, GP37 CLI_RS05975 abb4308690828e99e3defb31379356c1 109 Gene3D G3DSA:1.10.287.1080 1 90 4.0E-11 T 23-04-2016 CLI_RS18085 86b6269fc0b3b78aa37d0be40045ec3f 458 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 16 456 2.6E-111 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18085 86b6269fc0b3b78aa37d0be40045ec3f 458 SUPERFAMILY SSF53244 313 458 3.36E-37 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS18085 86b6269fc0b3b78aa37d0be40045ec3f 458 Gene3D G3DSA:3.40.1190.10 107 308 7.9E-48 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS18085 86b6269fc0b3b78aa37d0be40045ec3f 458 SUPERFAMILY SSF53623 111 296 5.36E-43 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS18085 86b6269fc0b3b78aa37d0be40045ec3f 458 Gene3D G3DSA:3.90.190.20 315 455 1.7E-41 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS18085 86b6269fc0b3b78aa37d0be40045ec3f 458 PANTHER PTHR23135:SF2 7 458 8.5E-164 T 23-04-2016 CLI_RS18085 86b6269fc0b3b78aa37d0be40045ec3f 458 Gene3D G3DSA:3.40.50.720 14 104 5.3E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS18085 86b6269fc0b3b78aa37d0be40045ec3f 458 SUPERFAMILY SSF51984 15 105 5.23E-14 T 23-04-2016 CLI_RS18085 86b6269fc0b3b78aa37d0be40045ec3f 458 PANTHER PTHR23135 7 458 8.5E-164 T 23-04-2016 CLI_RS18085 86b6269fc0b3b78aa37d0be40045ec3f 458 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 15 458 31.601 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18085 86b6269fc0b3b78aa37d0be40045ec3f 458 Pfam PF08245 Mur ligase middle domain 122 294 3.2E-36 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS04535 ef1058b6b1fe063d5534bebf6142188d 402 Pfam PF00190 Cupin 242 374 4.6E-18 T 23-04-2016 IPR006045 Cupin 1 GO:0045735 CLI_RS04535 ef1058b6b1fe063d5534bebf6142188d 402 Pfam PF00190 Cupin 71 201 2.4E-18 T 23-04-2016 IPR006045 Cupin 1 GO:0045735 CLI_RS04535 ef1058b6b1fe063d5534bebf6142188d 402 PANTHER PTHR31238 173 402 1.1E-89 T 23-04-2016 CLI_RS04535 ef1058b6b1fe063d5534bebf6142188d 402 SMART SM00835 240 380 2.2E-20 T 23-04-2016 IPR006045 Cupin 1 GO:0045735 CLI_RS04535 ef1058b6b1fe063d5534bebf6142188d 402 SMART SM00835 62 204 7.3E-18 T 23-04-2016 IPR006045 Cupin 1 GO:0045735 CLI_RS04535 ef1058b6b1fe063d5534bebf6142188d 402 SUPERFAMILY SSF51182 21 385 5.36E-95 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS04535 ef1058b6b1fe063d5534bebf6142188d 402 Gene3D G3DSA:2.60.120.10 230 394 1.2E-68 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS04535 ef1058b6b1fe063d5534bebf6142188d 402 Gene3D G3DSA:2.60.120.10 14 208 4.0E-74 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS04535 ef1058b6b1fe063d5534bebf6142188d 402 PANTHER PTHR31238:SF32 173 402 1.1E-89 T 23-04-2016 CLI_RS04535 ef1058b6b1fe063d5534bebf6142188d 402 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 25 386 8.1E-157 T 23-04-2016 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 CLI_RS15285 463825bff8b323890f620b2a3c96f4db 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 2 372 5.8E-154 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CLI_RS15285 463825bff8b323890f620b2a3c96f4db 376 SUPERFAMILY SSF51713 1 370 2.22E-150 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CLI_RS15285 463825bff8b323890f620b2a3c96f4db 376 PANTHER PTHR21148:SF26 2 373 5.7E-174 T 23-04-2016 CLI_RS15285 463825bff8b323890f620b2a3c96f4db 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 367 4.8E-88 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CLI_RS15285 463825bff8b323890f620b2a3c96f4db 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 366 54.85 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CLI_RS15285 463825bff8b323890f620b2a3c96f4db 376 PANTHER PTHR21148 2 373 5.7E-174 T 23-04-2016 CLI_RS15285 463825bff8b323890f620b2a3c96f4db 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 2 371 6.4E-148 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CLI_RS15285 463825bff8b323890f620b2a3c96f4db 376 Gene3D G3DSA:3.20.20.105 2 371 1.2E-155 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CLI_RS03595 4d63783c04725100873e75d3306cd465 154 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 153 4.3E-42 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CLI_RS03595 4d63783c04725100873e75d3306cd465 154 PANTHER PTHR30437 1 154 2.7E-46 T 23-04-2016 CLI_RS03595 4d63783c04725100873e75d3306cd465 154 SUPERFAMILY SSF46557 2 76 5.89E-20 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CLI_RS03595 4d63783c04725100873e75d3306cd465 154 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 153 2.0E-19 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CLI_RS03595 4d63783c04725100873e75d3306cd465 154 Gene3D G3DSA:3.10.50.30 75 153 4.9E-21 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CLI_RS03595 4d63783c04725100873e75d3306cd465 154 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 154 27.95 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CLI_RS03595 4d63783c04725100873e75d3306cd465 154 SUPERFAMILY SSF54534 80 153 6.02E-15 T 23-04-2016 CLI_RS03595 4d63783c04725100873e75d3306cd465 154 Gene3D G3DSA:1.10.287.180 2 74 6.3E-21 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CLI_RS03595 4d63783c04725100873e75d3306cd465 154 PIRSF PIRSF006092 1 154 3.0E-47 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CLI_RS03595 4d63783c04725100873e75d3306cd465 154 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 1.7E-19 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CLI_RS17040 4637826170fcde0833759a2008d45350 268 PANTHER PTHR10000:SF16 1 267 1.2E-119 T 23-04-2016 CLI_RS17040 4637826170fcde0833759a2008d45350 268 Gene3D G3DSA:3.40.50.1000 1 75 4.6E-58 T 23-04-2016 IPR023214 HAD-like domain CLI_RS17040 4637826170fcde0833759a2008d45350 268 Gene3D G3DSA:3.40.50.1000 181 267 4.6E-58 T 23-04-2016 IPR023214 HAD-like domain CLI_RS17040 4637826170fcde0833759a2008d45350 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 234 7.2E-27 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 CLI_RS17040 4637826170fcde0833759a2008d45350 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 261 1.8E-73 T 23-04-2016 IPR023214 HAD-like domain CLI_RS17040 4637826170fcde0833759a2008d45350 268 PANTHER PTHR10000 1 267 1.2E-119 T 23-04-2016 CLI_RS17040 4637826170fcde0833759a2008d45350 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 261 5.8E-68 T 23-04-2016 IPR000150 Cof protein GO:0016787 CLI_RS17040 4637826170fcde0833759a2008d45350 268 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 23-04-2016 IPR000150 Cof protein GO:0016787 CLI_RS17040 4637826170fcde0833759a2008d45350 268 SUPERFAMILY SSF56784 1 266 2.36E-80 T 23-04-2016 IPR023214 HAD-like domain CLI_RS17040 4637826170fcde0833759a2008d45350 268 Gene3D G3DSA:3.30.1240.10 87 180 5.0E-31 T 23-04-2016 CLI_RS01775 aac69200673b5e7668293cd1cfba3f5f 574 SUPERFAMILY SSF52540 328 572 2.0E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01775 aac69200673b5e7668293cd1cfba3f5f 574 SMART SM00382 362 548 3.4E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS01775 aac69200673b5e7668293cd1cfba3f5f 574 SUPERFAMILY SSF90123 11 320 2.75E-74 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS01775 aac69200673b5e7668293cd1cfba3f5f 574 Pfam PF00005 ABC transporter 353 502 1.7E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS01775 aac69200673b5e7668293cd1cfba3f5f 574 PANTHER PTHR24221 6 574 2.9E-228 T 23-04-2016 CLI_RS01775 aac69200673b5e7668293cd1cfba3f5f 574 Gene3D G3DSA:1.20.1560.10 11 319 5.8E-71 T 23-04-2016 CLI_RS01775 aac69200673b5e7668293cd1cfba3f5f 574 Pfam PF00664 ABC transporter transmembrane region 18 290 9.6E-49 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS01775 aac69200673b5e7668293cd1cfba3f5f 574 Gene3D G3DSA:3.40.50.300 336 567 5.6E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01775 aac69200673b5e7668293cd1cfba3f5f 574 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07385 feb9d012f97233b3f4c4e66fbda6acad 283 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 81 279 9.7E-42 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS07385 feb9d012f97233b3f4c4e66fbda6acad 283 SMART SM00646 161 279 6.0E-20 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS07385 feb9d012f97233b3f4c4e66fbda6acad 283 PANTHER PTHR30404 73 91 1.1E-43 T 23-04-2016 CLI_RS07385 feb9d012f97233b3f4c4e66fbda6acad 283 PANTHER PTHR30404 111 283 1.1E-43 T 23-04-2016 CLI_RS07385 feb9d012f97233b3f4c4e66fbda6acad 283 SUPERFAMILY SSF53187 79 282 8.79E-37 T 23-04-2016 CLI_RS07385 feb9d012f97233b3f4c4e66fbda6acad 283 Gene3D G3DSA:3.40.630.40 79 283 1.1E-44 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS04605 f88c3510795aad6d82307c8083bbb9c4 166 Pfam PF01327 Polypeptide deformylase 4 155 2.6E-37 T 23-04-2016 IPR023635 Peptide deformylase CLI_RS04605 f88c3510795aad6d82307c8083bbb9c4 166 SUPERFAMILY SSF56420 4 162 1.3E-41 T 23-04-2016 IPR023635 Peptide deformylase CLI_RS04605 f88c3510795aad6d82307c8083bbb9c4 166 PIRSF PIRSF004749 1 165 4.6E-29 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS04605 f88c3510795aad6d82307c8083bbb9c4 166 PRINTS PR01576 Peptide deformylase signature 93 104 4.1E-12 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS04605 f88c3510795aad6d82307c8083bbb9c4 166 PRINTS PR01576 Peptide deformylase signature 124 153 4.1E-12 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS04605 f88c3510795aad6d82307c8083bbb9c4 166 PRINTS PR01576 Peptide deformylase signature 105 123 4.1E-12 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS04605 f88c3510795aad6d82307c8083bbb9c4 166 PRINTS PR01576 Peptide deformylase signature 39 68 4.1E-12 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS04605 f88c3510795aad6d82307c8083bbb9c4 166 Hamap MF_00163 Peptide deformylase [def]. 2 166 19.751 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS04605 f88c3510795aad6d82307c8083bbb9c4 166 PANTHER PTHR10458 1 163 2.1E-46 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS04605 f88c3510795aad6d82307c8083bbb9c4 166 Gene3D G3DSA:3.90.45.10 4 162 1.5E-39 T 23-04-2016 IPR023635 Peptide deformylase CLI_RS04940 37edf09184edb624bfdbdc9e25e54abc 197 PANTHER PTHR34822 7 177 1.6E-58 T 23-04-2016 CLI_RS04940 37edf09184edb624bfdbdc9e25e54abc 197 SUPERFAMILY SSF81301 11 175 2.94E-55 T 23-04-2016 CLI_RS04940 37edf09184edb624bfdbdc9e25e54abc 197 Pfam PF04229 GrpB protein 10 168 6.3E-53 T 23-04-2016 IPR007344 GrpB/Dephospho-CoA kinase CLI_RS04940 37edf09184edb624bfdbdc9e25e54abc 197 Gene3D G3DSA:3.30.460.10 7 175 3.0E-61 T 23-04-2016 CLI_RS16925 0188bc07e4d99f9875419c5ac6634ba9 254 Pfam PF04397 LytTr DNA-binding domain 158 252 2.6E-29 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 CLI_RS16925 0188bc07e4d99f9875419c5ac6634ba9 254 SMART SM00850 157 253 8.2E-38 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 CLI_RS16925 0188bc07e4d99f9875419c5ac6634ba9 254 Gene3D G3DSA:2.20.25.10 215 254 6.4E-12 T 23-04-2016 CLI_RS16925 0188bc07e4d99f9875419c5ac6634ba9 254 PANTHER PTHR26402 4 162 2.3E-75 T 23-04-2016 CLI_RS16925 0188bc07e4d99f9875419c5ac6634ba9 254 SUPERFAMILY SSF52172 1 121 5.55E-27 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS16925 0188bc07e4d99f9875419c5ac6634ba9 254 PANTHER PTHR26402:SF501 4 162 2.3E-75 T 23-04-2016 CLI_RS16925 0188bc07e4d99f9875419c5ac6634ba9 254 SMART SM00448 4 115 1.4E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS16925 0188bc07e4d99f9875419c5ac6634ba9 254 Gene3D G3DSA:3.40.50.2300 2 122 7.1E-28 T 23-04-2016 CLI_RS16925 0188bc07e4d99f9875419c5ac6634ba9 254 Gene3D G3DSA:2.40.50.40 148 213 2.0E-20 T 23-04-2016 CLI_RS16925 0188bc07e4d99f9875419c5ac6634ba9 254 Pfam PF00072 Response regulator receiver domain 7 111 2.3E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 PANTHER PTHR23084 38 188 1.4E-57 T 23-04-2016 CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 Gene3D G3DSA:2.20.110.10 73 187 1.1E-36 T 23-04-2016 CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 SUPERFAMILY SSF82185 38 130 1.26E-27 T 23-04-2016 CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 SUPERFAMILY SSF82185 103 186 1.18E-23 T 23-04-2016 CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 SMART SM00698 84 105 2.9E-6 T 23-04-2016 IPR003409 MORN motif CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 SMART SM00698 107 128 0.024 T 23-04-2016 IPR003409 MORN motif CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 SMART SM00698 130 151 0.059 T 23-04-2016 IPR003409 MORN motif CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 SMART SM00698 61 82 0.0014 T 23-04-2016 IPR003409 MORN motif CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 SMART SM00698 153 174 3.7E-6 T 23-04-2016 IPR003409 MORN motif CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 SMART SM00698 38 59 9.1E-4 T 23-04-2016 IPR003409 MORN motif CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 Pfam PF02493 MORN repeat 109 131 1.7E-6 T 23-04-2016 IPR003409 MORN motif CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 Pfam PF02493 MORN repeat 155 175 2.7E-6 T 23-04-2016 IPR003409 MORN motif CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 Pfam PF02493 MORN repeat 40 61 6.8E-6 T 23-04-2016 IPR003409 MORN motif CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 Pfam PF02493 MORN repeat 63 83 1.0E-6 T 23-04-2016 IPR003409 MORN motif CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 Pfam PF02493 MORN repeat 86 106 1.3E-8 T 23-04-2016 IPR003409 MORN motif CLI_RS07725 51c35e694e76164b2a8f7f736f924ebc 189 Pfam PF02493 MORN repeat 132 150 5.7E-5 T 23-04-2016 IPR003409 MORN motif CLI_RS18225 05c45db7f202733c20b518ed7ca34300 183 PANTHER PTHR36432 2 178 2.6E-115 T 23-04-2016 CLI_RS18225 05c45db7f202733c20b518ed7ca34300 183 Gene3D G3DSA:2.10.260.10 1 52 3.3E-28 T 23-04-2016 CLI_RS18225 05c45db7f202733c20b518ed7ca34300 183 Gene3D G3DSA:3.30.450.40 102 178 1.2E-6 T 23-04-2016 IPR029016 GAF domain-like CLI_RS18225 05c45db7f202733c20b518ed7ca34300 183 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 182 6.5E-90 T 23-04-2016 IPR014213 Sporulation stage V, protein T CLI_RS18225 05c45db7f202733c20b518ed7ca34300 183 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 9.2E-10 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 CLI_RS18225 05c45db7f202733c20b518ed7ca34300 183 SMART SM00966 8 52 1.6E-9 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 CLI_RS18225 05c45db7f202733c20b518ed7ca34300 183 SUPERFAMILY SSF55781 102 178 2.59E-7 T 23-04-2016 IPR029016 GAF domain-like CLI_RS18225 05c45db7f202733c20b518ed7ca34300 183 PANTHER PTHR36432:SF1 2 178 2.6E-115 T 23-04-2016 CLI_RS18225 05c45db7f202733c20b518ed7ca34300 183 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 182 3.1E-47 T 23-04-2016 CLI_RS18225 05c45db7f202733c20b518ed7ca34300 183 SUPERFAMILY SSF89447 1 51 3.66E-14 T 23-04-2016 CLI_RS18225 05c45db7f202733c20b518ed7ca34300 183 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 1.6E-14 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 CLI_RS18225 05c45db7f202733c20b518ed7ca34300 183 PIRSF PIRSF026579 1 183 5.7E-90 T 23-04-2016 IPR014213 Sporulation stage V, protein T CLI_RS08685 1a94a34fb97fb6dc227e9557e7e5301f 1485 PANTHER PTHR32256:SF9 1 1485 0.0 T 23-04-2016 CLI_RS08685 1a94a34fb97fb6dc227e9557e7e5301f 1485 Pfam PF16472 Domain of unknown function (DUF5050) 492 633 1.6E-24 T 23-04-2016 IPR032485 Domain of unknown function DUF5050 CLI_RS08685 1a94a34fb97fb6dc227e9557e7e5301f 1485 Pfam PF16472 Domain of unknown function (DUF5050) 345 462 1.4E-26 T 23-04-2016 IPR032485 Domain of unknown function DUF5050 CLI_RS08685 1a94a34fb97fb6dc227e9557e7e5301f 1485 PANTHER PTHR32256 1 1485 0.0 T 23-04-2016 CLI_RS08685 1a94a34fb97fb6dc227e9557e7e5301f 1485 Gene3D G3DSA:2.120.10.60 369 461 4.3E-5 T 23-04-2016 CLI_RS08685 1a94a34fb97fb6dc227e9557e7e5301f 1485 Gene3D G3DSA:2.120.10.60 501 642 9.3E-5 T 23-04-2016 CLI_RS08685 1a94a34fb97fb6dc227e9557e7e5301f 1485 SUPERFAMILY SSF63825 350 547 1.36E-7 T 23-04-2016 CLI_RS08685 1a94a34fb97fb6dc227e9557e7e5301f 1485 Pfam PF07532 Bacterial Ig-like domain (group 4) 673 727 1.6E-12 T 23-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 CLI_RS14735 6f4d24dbf7f94082610d67baab632987 343 PANTHER PTHR34824 1 343 1.2E-116 T 23-04-2016 CLI_RS14735 6f4d24dbf7f94082610d67baab632987 343 Pfam PF08279 HTH domain 10 71 1.9E-5 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 CLI_RS14735 6f4d24dbf7f94082610d67baab632987 343 Pfam PF01628 HrcA protein C terminal domain 104 321 1.2E-58 T 23-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 CLI_RS14735 6f4d24dbf7f94082610d67baab632987 343 SUPERFAMILY SSF46785 1 82 3.08E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14735 6f4d24dbf7f94082610d67baab632987 343 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 333 9.6E-101 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CLI_RS14735 6f4d24dbf7f94082610d67baab632987 343 PIRSF PIRSF005485 1 339 1.3E-106 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CLI_RS14735 6f4d24dbf7f94082610d67baab632987 343 Gene3D G3DSA:1.10.10.10 1 82 3.9E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14735 6f4d24dbf7f94082610d67baab632987 343 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 328 28.478 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CLI_RS14735 6f4d24dbf7f94082610d67baab632987 343 SUPERFAMILY SSF55781 70 337 6.87E-56 T 23-04-2016 IPR029016 GAF domain-like CLI_RS14735 6f4d24dbf7f94082610d67baab632987 343 Gene3D G3DSA:3.30.450.40 176 337 3.9E-44 T 23-04-2016 IPR029016 GAF domain-like CLI_RS10660 a45256df7d818aa0f462647a713e0b16 262 Pfam PF09234 Domain of unknown function (DUF1963) 41 261 2.3E-62 T 23-04-2016 IPR015315 Protein of unknown function DUF1963 CLI_RS10660 a45256df7d818aa0f462647a713e0b16 262 Gene3D G3DSA:2.30.320.10 5 262 1.8E-88 T 23-04-2016 IPR015315 Protein of unknown function DUF1963 CLI_RS10660 a45256df7d818aa0f462647a713e0b16 262 PANTHER PTHR36436 1 262 4.7E-167 T 23-04-2016 CLI_RS10660 a45256df7d818aa0f462647a713e0b16 262 SUPERFAMILY SSF103032 6 262 8.89E-73 T 23-04-2016 IPR015315 Protein of unknown function DUF1963 CLI_RS10660 a45256df7d818aa0f462647a713e0b16 262 PANTHER PTHR36436:SF1 1 262 4.7E-167 T 23-04-2016 CLI_RS10305 73c35994dca406c18a587413b6a58cea 411 SUPERFAMILY SSF50978 90 352 1.63E-11 T 23-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 CLI_RS10305 73c35994dca406c18a587413b6a58cea 411 Gene3D G3DSA:2.130.10.10 94 128 2.4E-6 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CLI_RS10305 73c35994dca406c18a587413b6a58cea 411 Gene3D G3DSA:2.130.10.10 207 357 2.4E-6 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CLI_RS05390 1810cb889dbe350116541a1dd7e27727 252 Pfam PF14268 YoaP-like 203 245 1.9E-17 T 23-04-2016 IPR025685 YoaP-like domain KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- CLI_RS05390 1810cb889dbe350116541a1dd7e27727 252 SUPERFAMILY SSF55729 57 117 1.86E-6 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05390 1810cb889dbe350116541a1dd7e27727 252 Gene3D G3DSA:3.40.630.30 66 118 1.6E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS07670 26a9c5d4c1dbf29ea9d052db50388df7 350 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 7 343 2.3E-85 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CLI_RS07670 26a9c5d4c1dbf29ea9d052db50388df7 350 PANTHER PTHR21091:SF9 87 345 8.6E-132 T 23-04-2016 CLI_RS07670 26a9c5d4c1dbf29ea9d052db50388df7 350 SUPERFAMILY SSF51726 5 347 1.62E-63 T 23-04-2016 CLI_RS07670 26a9c5d4c1dbf29ea9d052db50388df7 350 Gene3D G3DSA:3.20.20.210 3 344 4.2E-78 T 23-04-2016 CLI_RS07670 26a9c5d4c1dbf29ea9d052db50388df7 350 PANTHER PTHR21091 87 345 8.6E-132 T 23-04-2016 CLI_RS09745 e96415c390de7c629d720dd0455b8a9e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 6.5E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS09745 e96415c390de7c629d720dd0455b8a9e 229 SUPERFAMILY SSF52172 4 181 6.69E-40 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS09745 e96415c390de7c629d720dd0455b8a9e 229 Gene3D G3DSA:3.40.50.2300 4 120 1.4E-40 T 23-04-2016 CLI_RS09745 e96415c390de7c629d720dd0455b8a9e 229 Pfam PF00072 Response regulator receiver domain 5 113 4.9E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS09745 e96415c390de7c629d720dd0455b8a9e 229 Gene3D G3DSA:1.10.10.10 126 225 2.1E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09745 e96415c390de7c629d720dd0455b8a9e 229 PANTHER PTHR26402:SF556 3 225 1.8E-129 T 23-04-2016 CLI_RS09745 e96415c390de7c629d720dd0455b8a9e 229 PANTHER PTHR26402 3 225 1.8E-129 T 23-04-2016 CLI_RS09745 e96415c390de7c629d720dd0455b8a9e 229 SMART SM00448 3 112 7.7E-44 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS09745 e96415c390de7c629d720dd0455b8a9e 229 SMART SM00862 148 224 1.8E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS00505 4584600e46c808602ab0894a1efa153a 144 PANTHER PTHR33164 3 143 2.5E-50 T 23-04-2016 CLI_RS00505 4584600e46c808602ab0894a1efa153a 144 PANTHER PTHR33164:SF17 3 143 2.5E-50 T 23-04-2016 CLI_RS00505 4584600e46c808602ab0894a1efa153a 144 SMART SM00347 26 126 2.9E-14 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS00505 4584600e46c808602ab0894a1efa153a 144 Gene3D G3DSA:1.10.10.10 2 138 9.5E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS00505 4584600e46c808602ab0894a1efa153a 144 Pfam PF01047 MarR family 33 90 1.1E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS00505 4584600e46c808602ab0894a1efa153a 144 SUPERFAMILY SSF46785 10 140 1.09E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05150 f1a721c26f24d187563cae82cff97343 197 Gene3D G3DSA:2.60.120.200 15 190 5.4E-44 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain CLI_RS05150 f1a721c26f24d187563cae82cff97343 197 Pfam PF07081 Protein of unknown function (DUF1349) 11 190 2.2E-67 T 23-04-2016 IPR009784 Protein of unknown function DUF1349 CLI_RS05150 f1a721c26f24d187563cae82cff97343 197 SUPERFAMILY SSF49899 11 190 5.94E-42 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain CLI_RS05150 f1a721c26f24d187563cae82cff97343 197 PANTHER PTHR35332:SF2 5 197 4.3E-77 T 23-04-2016 CLI_RS05150 f1a721c26f24d187563cae82cff97343 197 PIRSF PIRSF022704 1 197 4.5E-67 T 23-04-2016 IPR015987 Uncharacterised conserved protein UCP022704 CLI_RS05150 f1a721c26f24d187563cae82cff97343 197 PANTHER PTHR35332 5 197 4.3E-77 T 23-04-2016 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 PANTHER PTHR30627:SF2 721 919 8.4E-197 T 23-04-2016 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 PANTHER PTHR30627:SF2 487 608 8.4E-197 T 23-04-2016 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 PANTHER PTHR30627:SF2 198 440 8.4E-197 T 23-04-2016 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 PANTHER PTHR30627:SF2 1 108 8.4E-197 T 23-04-2016 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 SUPERFAMILY SSF56601 479 586 4.42E-80 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 SUPERFAMILY SSF56601 727 882 4.42E-80 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 SUPERFAMILY SSF56601 295 404 4.42E-80 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 Gene3D G3DSA:3.90.1310.10 224 342 1.4E-29 T 23-04-2016 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 Gene3D G3DSA:3.40.710.10 475 608 3.8E-99 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 Gene3D G3DSA:3.40.710.10 343 423 3.8E-99 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 Gene3D G3DSA:3.40.710.10 722 883 3.8E-99 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 Pfam PF00905 Penicillin binding protein transpeptidase domain 380 876 3.7E-52 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 PANTHER PTHR30627 721 919 8.4E-197 T 23-04-2016 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 PANTHER PTHR30627 487 608 8.4E-197 T 23-04-2016 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 PANTHER PTHR30627 198 440 8.4E-197 T 23-04-2016 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 PANTHER PTHR30627 1 108 8.4E-197 T 23-04-2016 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 SUPERFAMILY SSF56519 217 343 1.14E-36 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 SUPERFAMILY SSF56519 47 112 1.14E-36 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLI_RS14920 c52f6a7b7cbec1dd6e369c3197be6ff0 924 Pfam PF03717 Penicillin-binding Protein dimerisation domain 55 329 1.9E-50 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLI_RS15750 bc10c4272000e4cde52ab0078e8a1815 236 Gene3D G3DSA:3.30.70.250 4 88 4.9E-30 T 23-04-2016 CLI_RS15750 bc10c4272000e4cde52ab0078e8a1815 236 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 3 236 43.515 T 23-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 CLI_RS15750 bc10c4272000e4cde52ab0078e8a1815 236 Gene3D G3DSA:2.160.10.10 89 223 2.5E-48 T 23-04-2016 CLI_RS15750 bc10c4272000e4cde52ab0078e8a1815 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 92 120 4.5E-4 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS15750 bc10c4272000e4cde52ab0078e8a1815 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 157 5.1E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS15750 bc10c4272000e4cde52ab0078e8a1815 236 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 175 203 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CLI_RS15750 bc10c4272000e4cde52ab0078e8a1815 236 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 9 236 5.3E-119 T 23-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 CLI_RS15750 bc10c4272000e4cde52ab0078e8a1815 236 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 167 200 6.6E-11 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS15750 bc10c4272000e4cde52ab0078e8a1815 236 PANTHER PTHR23416:SF50 50 236 1.5E-47 T 23-04-2016 CLI_RS15750 bc10c4272000e4cde52ab0078e8a1815 236 SUPERFAMILY SSF51161 89 225 1.52E-49 T 23-04-2016 IPR011004 Trimeric LpxA-like CLI_RS15750 bc10c4272000e4cde52ab0078e8a1815 236 PANTHER PTHR23416 50 236 1.5E-47 T 23-04-2016 CLI_RS15750 bc10c4272000e4cde52ab0078e8a1815 236 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 6 88 4.0E-30 T 23-04-2016 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 CLI_RS00490 25b1a0d6e44ca01cde10aba733fbffc9 172 Pfam PF07670 Nucleoside recognition 43 143 1.6E-7 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS00490 25b1a0d6e44ca01cde10aba733fbffc9 172 PANTHER PTHR35793 1 172 5.8E-105 T 23-04-2016 CLI_RS02620 154f3d2084e0d54136fdecce2ccc6435 283 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 215 1.6E-57 T 23-04-2016 IPR003740 Uncharacterised membrane protein YitT CLI_RS02620 154f3d2084e0d54136fdecce2ccc6435 283 PANTHER PTHR33545:SF7 2 279 1.3E-143 T 23-04-2016 CLI_RS02620 154f3d2084e0d54136fdecce2ccc6435 283 PANTHER PTHR33545 2 279 1.3E-143 T 23-04-2016 CLI_RS02620 154f3d2084e0d54136fdecce2ccc6435 283 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 222 275 1.3E-17 T 23-04-2016 IPR019264 Domain of unknown function DUF2179 CLI_RS02620 154f3d2084e0d54136fdecce2ccc6435 283 PIRSF PIRSF006483 1 283 1.8E-85 T 23-04-2016 IPR003740 Uncharacterised membrane protein YitT CLI_RS03565 012d2f2e6a47ae70e5f687c383aab7f6 126 SUPERFAMILY SSF46785 4 124 6.99E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03565 012d2f2e6a47ae70e5f687c383aab7f6 126 PANTHER PTHR34134 4 124 3.0E-30 T 23-04-2016 CLI_RS03565 012d2f2e6a47ae70e5f687c383aab7f6 126 PIRSF PIRSF019455 1 126 7.9E-41 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLI_RS03565 012d2f2e6a47ae70e5f687c383aab7f6 126 Gene3D G3DSA:1.10.10.10 1 80 2.8E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03565 012d2f2e6a47ae70e5f687c383aab7f6 126 Pfam PF03965 Penicillinase repressor 7 120 2.7E-35 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLI_RS03565 012d2f2e6a47ae70e5f687c383aab7f6 126 PANTHER PTHR34134:SF1 4 124 3.0E-30 T 23-04-2016 CLI_RS03515 41f310fa1f32065d00766a507af7a5e4 232 SUPERFAMILY SSF140683 1 66 2.35E-5 T 23-04-2016 CLI_RS03515 41f310fa1f32065d00766a507af7a5e4 232 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 11 231 1.1E-75 T 23-04-2016 IPR019903 Repair of iron centres family CLI_RS03515 41f310fa1f32065d00766a507af7a5e4 232 Pfam PF04405 Domain of Unknown function (DUF542) 8 60 7.3E-19 T 23-04-2016 IPR019903 Repair of iron centres family CLI_RS03515 41f310fa1f32065d00766a507af7a5e4 232 Gene3D G3DSA:1.20.120.520 74 232 2.1E-29 T 23-04-2016 CLI_RS03515 41f310fa1f32065d00766a507af7a5e4 232 PANTHER PTHR36438 2 232 2.3E-98 T 23-04-2016 CLI_RS03515 41f310fa1f32065d00766a507af7a5e4 232 Pfam PF01814 Hemerythrin HHE cation binding domain 86 232 3.6E-20 T 23-04-2016 IPR012312 Haemerythrin-like CLI_RS03515 41f310fa1f32065d00766a507af7a5e4 232 PANTHER PTHR36438:SF1 2 232 2.3E-98 T 23-04-2016 CLI_RS02345 416b13579f11c441794515780ffdfb86 260 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS02345 416b13579f11c441794515780ffdfb86 260 Gene3D G3DSA:3.40.50.300 19 257 7.6E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02345 416b13579f11c441794515780ffdfb86 260 PIRSF PIRSF039085 17 260 5.2E-115 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CLI_RS02345 416b13579f11c441794515780ffdfb86 260 SUPERFAMILY SSF52540 20 255 2.86E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02345 416b13579f11c441794515780ffdfb86 260 PANTHER PTHR24220 22 260 1.4E-141 T 23-04-2016 CLI_RS02345 416b13579f11c441794515780ffdfb86 260 Pfam PF00005 ABC transporter 37 185 2.4E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS02345 416b13579f11c441794515780ffdfb86 260 SMART SM00382 45 233 1.9E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS02345 416b13579f11c441794515780ffdfb86 260 PANTHER PTHR24220:SF327 22 260 1.4E-141 T 23-04-2016 CLI_RS05775 da620503c0f9a3375075e9269a329e67 458 PANTHER PTHR30330:SF3 1 450 1.0E-235 T 23-04-2016 CLI_RS05775 da620503c0f9a3375075e9269a329e67 458 Pfam PF01235 Sodium:alanine symporter family 55 446 2.6E-121 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05775 da620503c0f9a3375075e9269a329e67 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 443 8.6E-132 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05775 da620503c0f9a3375075e9269a329e67 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 94 109 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05775 da620503c0f9a3375075e9269a329e67 458 PANTHER PTHR30330 1 450 1.0E-235 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05775 da620503c0f9a3375075e9269a329e67 458 PRINTS PR00175 Sodium/alanine symporter signature 94 116 8.1E-48 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05775 da620503c0f9a3375075e9269a329e67 458 PRINTS PR00175 Sodium/alanine symporter signature 211 230 8.1E-48 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05775 da620503c0f9a3375075e9269a329e67 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 8.1E-48 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05775 da620503c0f9a3375075e9269a329e67 458 PRINTS PR00175 Sodium/alanine symporter signature 183 201 8.1E-48 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05775 da620503c0f9a3375075e9269a329e67 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 8.1E-48 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05775 da620503c0f9a3375075e9269a329e67 458 PRINTS PR00175 Sodium/alanine symporter signature 306 324 8.1E-48 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05520 3b9822781ca7e551acbd83127d16fd84 333 SMART SM00342 245 328 3.6E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS05520 3b9822781ca7e551acbd83127d16fd84 333 Gene3D G3DSA:1.10.10.60 282 328 3.3E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS05520 3b9822781ca7e551acbd83127d16fd84 333 PANTHER PTHR11019:SF61 13 333 5.7E-96 T 23-04-2016 CLI_RS05520 3b9822781ca7e551acbd83127d16fd84 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 7.8E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS05520 3b9822781ca7e551acbd83127d16fd84 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 7.8E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS05520 3b9822781ca7e551acbd83127d16fd84 333 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 282 324 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLI_RS05520 3b9822781ca7e551acbd83127d16fd84 333 SUPERFAMILY SSF46689 230 279 5.82E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS05520 3b9822781ca7e551acbd83127d16fd84 333 PANTHER PTHR11019 13 333 5.7E-96 T 23-04-2016 CLI_RS05520 3b9822781ca7e551acbd83127d16fd84 333 Pfam PF12833 Helix-turn-helix domain 251 329 1.9E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS05520 3b9822781ca7e551acbd83127d16fd84 333 Gene3D G3DSA:1.10.10.60 228 281 7.5E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS05520 3b9822781ca7e551acbd83127d16fd84 333 SUPERFAMILY SSF46689 282 330 2.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS15595 9ca94466a81ff92cd6aeb2e4134b64ca 196 PANTHER PTHR34981 1 129 6.2E-33 T 23-04-2016 CLI_RS15595 9ca94466a81ff92cd6aeb2e4134b64ca 196 SUPERFAMILY SSF102829 4 81 3.14E-17 T 23-04-2016 IPR007838 Cell division protein ZapA-like CLI_RS15595 9ca94466a81ff92cd6aeb2e4134b64ca 196 PANTHER PTHR34981:SF1 1 129 6.2E-33 T 23-04-2016 CLI_RS15595 9ca94466a81ff92cd6aeb2e4134b64ca 196 Pfam PF05164 Cell division protein ZapA 4 126 1.1E-15 T 23-04-2016 IPR007838 Cell division protein ZapA-like CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 385 744 6.5E-67 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 PANTHER PTHR30290 342 823 3.4E-157 T 23-04-2016 CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 PANTHER PTHR30290 19 48 3.4E-157 T 23-04-2016 CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 SUPERFAMILY SSF58104 33 334 4.19E-58 T 23-04-2016 CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 SUPERFAMILY SSF53850 345 821 2.9E-101 T 23-04-2016 CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 Gene3D G3DSA:3.40.190.10 475 599 2.0E-20 T 23-04-2016 CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 117 309 8.5E-40 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 Gene3D G3DSA:1.10.287.950 80 294 2.6E-46 T 23-04-2016 CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 391 413 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 SMART SM00283 63 324 8.7E-41 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 Gene3D G3DSA:3.10.105.10 600 796 1.5E-43 T 23-04-2016 CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 PANTHER PTHR30290:SF14 342 823 3.4E-157 T 23-04-2016 CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 PANTHER PTHR30290:SF14 19 48 3.4E-157 T 23-04-2016 CLI_RS04305 42680a81ef586690c1740b44858b2b69 826 Gene3D G3DSA:3.90.76.10 376 474 1.2E-30 T 23-04-2016 CLI_RS03885 2ccfd27561ec387d33dce049ec5838c3 309 SUPERFAMILY SSF46785 2 59 5.55E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03885 2ccfd27561ec387d33dce049ec5838c3 309 Pfam PF13280 WYL domain 133 300 5.4E-25 T 23-04-2016 IPR026881 WYL domain CLI_RS03885 2ccfd27561ec387d33dce049ec5838c3 309 PANTHER PTHR30595:SF5 1 279 7.6E-33 T 23-04-2016 CLI_RS03885 2ccfd27561ec387d33dce049ec5838c3 309 PANTHER PTHR30595 1 279 7.6E-33 T 23-04-2016 CLI_RS03885 2ccfd27561ec387d33dce049ec5838c3 309 PIRSF PIRSF016838 1 307 5.2E-17 T 23-04-2016 IPR028349 Protein PafC CLI_RS03885 2ccfd27561ec387d33dce049ec5838c3 309 Pfam PF08279 HTH domain 7 59 6.0E-14 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 CLI_RS03885 2ccfd27561ec387d33dce049ec5838c3 309 Gene3D G3DSA:1.10.10.10 2 62 3.9E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03885 2ccfd27561ec387d33dce049ec5838c3 309 SMART SM00420 5 61 0.0051 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLI_RS06585 84f20f4a4ce275f37ae685e92a870e30 215 Gene3D G3DSA:3.40.225.10 4 210 1.9E-62 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CLI_RS06585 84f20f4a4ce275f37ae685e92a870e30 215 PANTHER PTHR22789 1 214 3.3E-78 T 23-04-2016 CLI_RS06585 84f20f4a4ce275f37ae685e92a870e30 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 184 2.4E-42 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CLI_RS06585 84f20f4a4ce275f37ae685e92a870e30 215 PANTHER PTHR22789:SF0 1 214 3.3E-78 T 23-04-2016 CLI_RS06585 84f20f4a4ce275f37ae685e92a870e30 215 SMART SM01007 9 186 3.4E-54 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CLI_RS06585 84f20f4a4ce275f37ae685e92a870e30 215 SUPERFAMILY SSF53639 4 210 4.51E-51 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CLI_RS08225 f4501db0cbae817f5168c481ad3a41b3 333 PANTHER PTHR30146:SF30 1 331 5.5E-126 T 23-04-2016 CLI_RS08225 f4501db0cbae817f5168c481ad3a41b3 333 SUPERFAMILY SSF53822 63 332 2.14E-54 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CLI_RS08225 f4501db0cbae817f5168c481ad3a41b3 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.9E-20 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 CLI_RS08225 f4501db0cbae817f5168c481ad3a41b3 333 SMART SM00354 2 72 5.9E-31 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 CLI_RS08225 f4501db0cbae817f5168c481ad3a41b3 333 Gene3D G3DSA:3.40.50.2300 55 178 6.4E-36 T 23-04-2016 CLI_RS08225 f4501db0cbae817f5168c481ad3a41b3 333 Gene3D G3DSA:1.10.260.40 3 54 8.7E-26 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS08225 f4501db0cbae817f5168c481ad3a41b3 333 SUPERFAMILY SSF47413 2 60 3.34E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS08225 f4501db0cbae817f5168c481ad3a41b3 333 Pfam PF13377 Periplasmic binding protein-like domain 174 332 1.8E-25 T 23-04-2016 CLI_RS08225 f4501db0cbae817f5168c481ad3a41b3 333 PANTHER PTHR30146 1 331 5.5E-126 T 23-04-2016 CLI_RS08225 f4501db0cbae817f5168c481ad3a41b3 333 Gene3D G3DSA:3.40.50.2300 179 312 2.8E-37 T 23-04-2016 CLI_RS08225 f4501db0cbae817f5168c481ad3a41b3 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 CLI_RS09890 94129951109fe4613678587108791721 576 Gene3D G3DSA:1.20.1560.10 3 319 4.8E-59 T 23-04-2016 CLI_RS09890 94129951109fe4613678587108791721 576 Pfam PF00664 ABC transporter transmembrane region 16 280 3.7E-38 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS09890 94129951109fe4613678587108791721 576 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS09890 94129951109fe4613678587108791721 576 Pfam PF00005 ABC transporter 349 496 1.4E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS09890 94129951109fe4613678587108791721 576 SUPERFAMILY SSF90123 4 314 1.96E-66 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS09890 94129951109fe4613678587108791721 576 SMART SM00382 358 543 3.4E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS09890 94129951109fe4613678587108791721 576 PANTHER PTHR24221:SF190 1 576 3.2E-245 T 23-04-2016 CLI_RS09890 94129951109fe4613678587108791721 576 Gene3D G3DSA:3.40.50.300 331 561 8.3E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09890 94129951109fe4613678587108791721 576 SUPERFAMILY SSF52540 323 568 1.77E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09890 94129951109fe4613678587108791721 576 PANTHER PTHR24221 1 576 3.2E-245 T 23-04-2016 CLI_RS14055 0c11d43c778a53f09a91e3bf47d44317 178 Gene3D G3DSA:3.90.1140.10 4 173 3.2E-35 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase CLI_RS14055 0c11d43c778a53f09a91e3bf47d44317 178 PANTHER PTHR35561:SF1 5 178 1.5E-53 T 23-04-2016 CLI_RS14055 0c11d43c778a53f09a91e3bf47d44317 178 SUPERFAMILY SSF55144 5 176 1.17E-29 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase CLI_RS14055 0c11d43c778a53f09a91e3bf47d44317 178 Pfam PF13563 2'-5' RNA ligase superfamily 34 136 1.4E-8 T 23-04-2016 CLI_RS14055 0c11d43c778a53f09a91e3bf47d44317 178 PANTHER PTHR35561 5 178 1.5E-53 T 23-04-2016 CLI_RS14055 0c11d43c778a53f09a91e3bf47d44317 178 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 4 176 20.59 T 23-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CLI_RS14055 0c11d43c778a53f09a91e3bf47d44317 178 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 5 173 6.3E-34 T 23-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CLI_RS02450 b0becda45dfe98b414f91c2ea40dd166 310 PANTHER PTHR14226:SF28 6 307 1.6E-141 T 23-04-2016 CLI_RS02450 b0becda45dfe98b414f91c2ea40dd166 310 Gene3D G3DSA:3.40.1090.10 7 195 3.9E-18 T 23-04-2016 CLI_RS02450 b0becda45dfe98b414f91c2ea40dd166 310 PANTHER PTHR14226 6 307 1.6E-141 T 23-04-2016 CLI_RS02450 b0becda45dfe98b414f91c2ea40dd166 310 SUPERFAMILY SSF52151 6 300 3.92E-36 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CLI_RS02450 b0becda45dfe98b414f91c2ea40dd166 310 Pfam PF01734 Patatin-like phospholipase 6 198 5.7E-25 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 CLI_RS15355 35d148642a1737d5475c31274cb6bb13 184 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 2 170 2.3E-60 T 23-04-2016 IPR014197 Sporulation protein YunB CLI_RS15355 35d148642a1737d5475c31274cb6bb13 184 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 78 167 9.0E-33 T 23-04-2016 IPR014197 Sporulation protein YunB CLI_RS15355 35d148642a1737d5475c31274cb6bb13 184 PIRSF PIRSF021383 1 182 3.9E-54 T 23-04-2016 IPR014197 Sporulation protein YunB CLI_RS03605 0e3371c4b61e468a22948f69f86249fa 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 1.5E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS03605 0e3371c4b61e468a22948f69f86249fa 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 1.5E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS03605 0e3371c4b61e468a22948f69f86249fa 273 SMART SM00342 183 266 9.6E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS03605 0e3371c4b61e468a22948f69f86249fa 273 Pfam PF12833 Helix-turn-helix domain 189 267 1.4E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS03605 0e3371c4b61e468a22948f69f86249fa 273 SUPERFAMILY SSF46689 220 270 6.72E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03605 0e3371c4b61e468a22948f69f86249fa 273 Gene3D G3DSA:1.10.10.60 168 217 5.9E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03605 0e3371c4b61e468a22948f69f86249fa 273 PANTHER PTHR11019:SF101 1 273 8.4E-130 T 23-04-2016 CLI_RS03605 0e3371c4b61e468a22948f69f86249fa 273 Gene3D G3DSA:1.10.10.60 220 269 5.4E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03605 0e3371c4b61e468a22948f69f86249fa 273 PANTHER PTHR11019 1 273 8.4E-130 T 23-04-2016 CLI_RS14265 9ddf87d7aabec93f33088524f1b59a97 216 PANTHER PTHR21098 2 216 1.1E-99 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14265 9ddf87d7aabec93f33088524f1b59a97 216 SUPERFAMILY SSF63380 1 87 1.7E-24 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLI_RS14265 9ddf87d7aabec93f33088524f1b59a97 216 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 5.1E-70 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14265 9ddf87d7aabec93f33088524f1b59a97 216 SUPERFAMILY SSF63380 93 195 5.53E-30 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLI_RS14265 9ddf87d7aabec93f33088524f1b59a97 216 Gene3D G3DSA:2.40.30.20 104 197 3.6E-28 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS14265 9ddf87d7aabec93f33088524f1b59a97 216 Gene3D G3DSA:2.40.30.20 5 103 1.3E-31 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS14265 9ddf87d7aabec93f33088524f1b59a97 216 PIRSF PIRSF000498 1 210 4.3E-74 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14265 9ddf87d7aabec93f33088524f1b59a97 216 Pfam PF00677 Lumazine binding domain 3 86 9.3E-22 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14265 9ddf87d7aabec93f33088524f1b59a97 216 Pfam PF00677 Lumazine binding domain 99 183 3.3E-19 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS03275 44eda300628312bcd822667ca01d7e7f 238 PANTHER PTHR34385 11 236 9.6E-89 T 23-04-2016 CLI_RS03275 44eda300628312bcd822667ca01d7e7f 238 SUPERFAMILY SSF55166 80 227 2.46E-33 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CLI_RS03275 44eda300628312bcd822667ca01d7e7f 238 PANTHER PTHR34385:SF1 11 236 9.6E-89 T 23-04-2016 CLI_RS03275 44eda300628312bcd822667ca01d7e7f 238 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 100 219 9.7E-37 T 23-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 CLI_RS17805 a032a839a941df8651ff0e839e8c4eb6 147 PANTHER PTHR12220 1 141 1.5E-80 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CLI_RS17805 a032a839a941df8651ff0e839e8c4eb6 147 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17805 a032a839a941df8651ff0e839e8c4eb6 147 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17805 a032a839a941df8651ff0e839e8c4eb6 147 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.4E-53 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CLI_RS17805 a032a839a941df8651ff0e839e8c4eb6 147 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.1E-62 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CLI_RS17805 a032a839a941df8651ff0e839e8c4eb6 147 SUPERFAMILY SSF54686 1 140 8.77E-62 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CLI_RS17805 a032a839a941df8651ff0e839e8c4eb6 147 Gene3D G3DSA:3.90.1170.10 22 140 1.1E-58 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CLI_RS17805 a032a839a941df8651ff0e839e8c4eb6 147 PRINTS PR00060 Ribosomal protein L16 signature 24 36 6.7E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CLI_RS17805 a032a839a941df8651ff0e839e8c4eb6 147 PRINTS PR00060 Ribosomal protein L16 signature 88 117 6.7E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CLI_RS17805 a032a839a941df8651ff0e839e8c4eb6 147 PRINTS PR00060 Ribosomal protein L16 signature 58 87 6.7E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CLI_RS17805 a032a839a941df8651ff0e839e8c4eb6 147 PRINTS PR00060 Ribosomal protein L16 signature 42 53 6.7E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CLI_RS17805 a032a839a941df8651ff0e839e8c4eb6 147 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.231 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CLI_RS09410 40a18aa10cbdc616529cf515ed4e5ede 250 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 199 248 3.0E-7 T 23-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 CLI_RS09410 40a18aa10cbdc616529cf515ed4e5ede 250 SUPERFAMILY SSF54786 196 249 3.53E-8 T 23-04-2016 CLI_RS09410 40a18aa10cbdc616529cf515ed4e5ede 250 Gene3D G3DSA:3.30.920.30 198 249 1.1E-8 T 23-04-2016 CLI_RS06065 476b11a1da494510891646e996d51801 365 SUPERFAMILY SSF53613 61 360 8.57E-60 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS06065 476b11a1da494510891646e996d51801 365 Gene3D G3DSA:1.10.10.10 1 47 1.2E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06065 476b11a1da494510891646e996d51801 365 Gene3D G3DSA:3.40.1190.20 61 359 1.1E-60 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS06065 476b11a1da494510891646e996d51801 365 SUPERFAMILY SSF46785 1 54 6.59E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06065 476b11a1da494510891646e996d51801 365 Pfam PF00294 pfkB family carbohydrate kinase 60 348 6.1E-46 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB CLI_RS06065 476b11a1da494510891646e996d51801 365 PANTHER PTHR10584:SF196 43 349 4.6E-139 T 23-04-2016 CLI_RS06065 476b11a1da494510891646e996d51801 365 PANTHER PTHR10584 43 349 4.6E-139 T 23-04-2016 CLI_RS06065 476b11a1da494510891646e996d51801 365 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 47 1.9E-10 T 23-04-2016 CLI_RS16985 fc50dad5f3b6918b126e63c70dedbcca 413 Pfam PF01966 HD domain 248 368 3.9E-18 T 23-04-2016 IPR006674 HD domain CLI_RS16985 fc50dad5f3b6918b126e63c70dedbcca 413 Pfam PF01966 HD domain 44 153 2.1E-8 T 23-04-2016 IPR006674 HD domain CLI_RS16985 fc50dad5f3b6918b126e63c70dedbcca 413 SUPERFAMILY SSF109604 34 193 2.16E-22 T 23-04-2016 CLI_RS16985 fc50dad5f3b6918b126e63c70dedbcca 413 Gene3D G3DSA:1.10.3210.10 230 397 1.6E-24 T 23-04-2016 IPR006674 HD domain CLI_RS16985 fc50dad5f3b6918b126e63c70dedbcca 413 Gene3D G3DSA:1.10.3210.10 38 204 7.5E-19 T 23-04-2016 IPR006674 HD domain CLI_RS16985 fc50dad5f3b6918b126e63c70dedbcca 413 SUPERFAMILY SSF109604 239 403 1.82E-30 T 23-04-2016 CLI_RS16985 fc50dad5f3b6918b126e63c70dedbcca 413 SMART SM00471 243 378 1.9E-10 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS16985 fc50dad5f3b6918b126e63c70dedbcca 413 SMART SM00471 39 165 0.73 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS17125 c6921e72ba2a95ccc64008c51b7caa23 292 SUPERFAMILY SSF52540 3 223 2.44E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17125 c6921e72ba2a95ccc64008c51b7caa23 292 Gene3D G3DSA:3.40.50.300 2 223 2.8E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17125 c6921e72ba2a95ccc64008c51b7caa23 292 PANTHER PTHR24220:SF331 4 278 8.5E-106 T 23-04-2016 CLI_RS17125 c6921e72ba2a95ccc64008c51b7caa23 292 SMART SM00382 26 208 9.6E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS17125 c6921e72ba2a95ccc64008c51b7caa23 292 PANTHER PTHR24220 4 278 8.5E-106 T 23-04-2016 CLI_RS17125 c6921e72ba2a95ccc64008c51b7caa23 292 Pfam PF00005 ABC transporter 20 161 4.7E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS17125 c6921e72ba2a95ccc64008c51b7caa23 292 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 451 3.4E-25 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 507 559 5.2E-9 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 PANTHER PTHR22573 496 574 2.3E-233 T 23-04-2016 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 PANTHER PTHR22573 19 479 2.3E-233 T 23-04-2016 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 SUPERFAMILY SSF53738 29 236 3.92E-43 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 SUPERFAMILY SSF55957 513 573 4.58E-14 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 SUPERFAMILY SSF55957 444 468 4.58E-14 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 Gene3D G3DSA:3.40.120.10 19 215 5.3E-59 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 SUPERFAMILY SSF53738 212 315 3.88E-17 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 SUPERFAMILY SSF53738 304 455 1.29E-33 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 Gene3D G3DSA:3.40.120.10 309 454 5.5E-39 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 42 179 6.2E-39 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 Gene3D G3DSA:3.40.120.10 230 308 1.1E-18 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 223 312 2.1E-19 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 Gene3D G3DSA:3.30.310.50 480 573 4.9E-23 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 PANTHER PTHR22573:SF54 496 574 2.3E-233 T 23-04-2016 CLI_RS15525 9177d7a0220baf0db3be55a0504dc0ec 575 PANTHER PTHR22573:SF54 19 479 2.3E-233 T 23-04-2016 CLI_RS15160 dfbb5318065593502d1abf17d141eb74 136 SUPERFAMILY SSF47413 3 70 3.38E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS15160 dfbb5318065593502d1abf17d141eb74 136 PANTHER PTHR10245 3 116 1.6E-17 T 23-04-2016 CLI_RS15160 dfbb5318065593502d1abf17d141eb74 136 Pfam PF01381 Helix-turn-helix 12 62 1.0E-16 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS15160 dfbb5318065593502d1abf17d141eb74 136 SMART SM00530 7 62 1.4E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS15160 dfbb5318065593502d1abf17d141eb74 136 PANTHER PTHR10245:SF43 3 116 1.6E-17 T 23-04-2016 CLI_RS15160 dfbb5318065593502d1abf17d141eb74 136 Gene3D G3DSA:1.10.260.40 3 67 3.2E-23 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS11435 9dd5f8359ca308eed3f6dd3b128004e1 306 PANTHER PTHR24220 6 260 9.8E-131 T 23-04-2016 CLI_RS11435 9dd5f8359ca308eed3f6dd3b128004e1 306 PANTHER PTHR24220:SF523 6 260 9.8E-131 T 23-04-2016 CLI_RS11435 9dd5f8359ca308eed3f6dd3b128004e1 306 SMART SM00382 29 212 6.4E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS11435 9dd5f8359ca308eed3f6dd3b128004e1 306 Pfam PF00005 ABC transporter 20 161 1.8E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS11435 9dd5f8359ca308eed3f6dd3b128004e1 306 Gene3D G3DSA:3.40.50.300 2 227 3.6E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11435 9dd5f8359ca308eed3f6dd3b128004e1 306 SUPERFAMILY SSF52540 4 225 8.48E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11435 9dd5f8359ca308eed3f6dd3b128004e1 306 Gene3D G3DSA:3.40.192.10 228 275 5.8E-4 T 23-04-2016 CLI_RS11435 9dd5f8359ca308eed3f6dd3b128004e1 306 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS14565 0305ce9df91239be63e25f6f2ed89a8c 114 SUPERFAMILY SSF51182 7 113 1.03E-26 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS14565 0305ce9df91239be63e25f6f2ed89a8c 114 Pfam PF07883 Cupin domain 44 109 8.7E-13 T 23-04-2016 IPR013096 Cupin 2, conserved barrel CLI_RS14565 0305ce9df91239be63e25f6f2ed89a8c 114 Gene3D G3DSA:2.60.120.10 7 112 1.2E-39 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS14565 0305ce9df91239be63e25f6f2ed89a8c 114 PANTHER PTHR37694 5 111 2.1E-28 T 23-04-2016 CLI_RS07350 d988b55395e9652033b2e1e6939828d4 268 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 69 82 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CLI_RS07350 d988b55395e9652033b2e1e6939828d4 268 SUPERFAMILY SSF53850 5 264 1.09E-59 T 23-04-2016 CLI_RS07350 d988b55395e9652033b2e1e6939828d4 268 PANTHER PTHR18966 41 264 1.2E-32 T 23-04-2016 CLI_RS07350 d988b55395e9652033b2e1e6939828d4 268 SMART SM00062 45 267 1.5E-51 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLI_RS07350 d988b55395e9652033b2e1e6939828d4 268 Gene3D G3DSA:3.40.190.10 42 132 5.7E-35 T 23-04-2016 CLI_RS07350 d988b55395e9652033b2e1e6939828d4 268 Gene3D G3DSA:3.40.190.10 226 265 5.7E-35 T 23-04-2016 CLI_RS07350 d988b55395e9652033b2e1e6939828d4 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 264 1.4E-53 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLI_RS07350 d988b55395e9652033b2e1e6939828d4 268 Gene3D G3DSA:3.40.190.10 134 224 7.4E-23 T 23-04-2016 CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 Gene3D G3DSA:1.10.1660.10 9 127 1.5E-28 T 23-04-2016 CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 PANTHER PTHR30204 1 169 2.1E-42 T 23-04-2016 CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 SUPERFAMILY SSF53335 172 341 1.09E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 SMART SM00422 9 78 1.3E-20 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 ProSitePatterns PS00552 MerR-type HTH domain signature. 12 34 - T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 21 34 1.3E-7 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 10 21 1.3E-7 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 45 65 1.3E-7 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 Pfam PF13411 MerR HTH family regulatory protein 9 76 1.5E-16 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 Gene3D G3DSA:3.40.50.150 208 429 1.9E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 PANTHER PTHR30204:SF5 1 169 2.1E-42 T 23-04-2016 CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 Pfam PF08241 Methyltransferase domain 214 311 6.4E-21 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLI_RS04395 4c3c35cd0b290169e773cfe2ec6a7bf8 429 SUPERFAMILY SSF46955 9 129 9.89E-27 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS17525 fd9db765e4d1bf1f1431c5fff80f9836 349 SUPERFAMILY SSF50129 4 173 1.57E-54 T 23-04-2016 IPR011032 GroES-like CLI_RS17525 fd9db765e4d1bf1f1431c5fff80f9836 349 Gene3D G3DSA:3.90.180.10 3 167 5.4E-59 T 23-04-2016 IPR011032 GroES-like CLI_RS17525 fd9db765e4d1bf1f1431c5fff80f9836 349 PANTHER PTHR11695:SF429 16 349 3.2E-133 T 23-04-2016 CLI_RS17525 fd9db765e4d1bf1f1431c5fff80f9836 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 132 9.4E-34 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLI_RS17525 fd9db765e4d1bf1f1431c5fff80f9836 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 CLI_RS17525 fd9db765e4d1bf1f1431c5fff80f9836 349 Gene3D G3DSA:3.40.50.720 168 288 8.5E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS17525 fd9db765e4d1bf1f1431c5fff80f9836 349 Pfam PF00107 Zinc-binding dehydrogenase 174 293 6.5E-28 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLI_RS17525 fd9db765e4d1bf1f1431c5fff80f9836 349 SMART SM00829 12 347 6.0E-6 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CLI_RS17525 fd9db765e4d1bf1f1431c5fff80f9836 349 SUPERFAMILY SSF51735 141 311 2.1E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS17525 fd9db765e4d1bf1f1431c5fff80f9836 349 PANTHER PTHR11695 16 349 3.2E-133 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 Gene3D G3DSA:3.40.50.1380 2 185 1.5E-78 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 PANTHER PTHR11692 1 499 2.4E-289 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 SMART SM00798 133 437 1.5E-176 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 PANTHER PTHR11692:SF2 1 499 2.4E-289 T 23-04-2016 CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 SUPERFAMILY SSF53927 203 499 1.5E-120 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 499 1.2E-194 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 SMART SM00851 14 128 3.7E-51 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 PIRSF PIRSF000414 1 499 3.6E-208 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 Gene3D G3DSA:3.40.140.20 356 489 4.5E-50 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 Gene3D G3DSA:3.40.140.20 234 350 2.5E-50 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 Pfam PF02142 MGS-like domain 14 128 1.3E-24 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 436 1.6E-114 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 SUPERFAMILY SSF52335 2 191 4.12E-65 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CLI_RS14315 c28ee6fe161c83fb4f0d216f7338141a 499 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 499 42.835 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 SMART SM00838 402 491 2.3E-4 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 Gene3D G3DSA:3.30.70.870 298 374 3.8E-27 T 23-04-2016 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 Pfam PF00009 Elongation factor Tu GTP binding domain 8 186 7.4E-53 T 23-04-2016 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 SUPERFAMILY SSF54980 404 499 1.82E-24 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 Gene3D G3DSA:2.40.30.10 199 293 1.5E-25 T 23-04-2016 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 PRINTS PR00315 GTP-binding elongation factor signature 54 62 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 180 3.1E-21 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 Gene3D G3DSA:3.30.70.240 406 494 8.0E-22 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 TIGRFAM TIGR01393 lepA: elongation factor 4 8 601 0.0 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 Pfam PF03144 Elongation factor Tu domain 2 210 280 1.2E-11 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 Pfam PF06421 GTP-binding protein LepA C-terminus 493 599 4.1E-51 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 Hamap MF_00071 Elongation factor 4 [lepA]. 1 602 305.783 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 Pfam PF00679 Elongation factor G C-terminus 405 491 2.8E-24 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 Gene3D G3DSA:3.40.50.300 4 198 4.5E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 SUPERFAMILY SSF54980 298 375 1.15E-19 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 PANTHER PTHR23115:SF175 402 601 6.1E-303 T 23-04-2016 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 PANTHER PTHR23115:SF175 4 378 6.1E-303 T 23-04-2016 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 SUPERFAMILY SSF52540 6 229 2.36E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 PANTHER PTHR23115 402 601 6.1E-303 T 23-04-2016 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 PANTHER PTHR23115 4 378 6.1E-303 T 23-04-2016 CLI_RS14745 5902b649c4c0ea3a8f418df28cfb2525 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CLI_RS02865 71ff163b590e27db810a2eaf94c32824 449 Pfam PF13520 Amino acid permease 11 410 2.0E-58 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS02865 71ff163b590e27db810a2eaf94c32824 449 PANTHER PTHR11785 2 449 5.9E-196 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS02865 71ff163b590e27db810a2eaf94c32824 449 PANTHER PTHR11785:SF259 2 449 5.9E-196 T 23-04-2016 CLI_RS02865 71ff163b590e27db810a2eaf94c32824 449 PIRSF PIRSF006060 1 449 9.5E-74 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS03345 ed81a66f2d4ccf18d30549b8584a2221 241 PANTHER PTHR11019:SF136 4 239 2.3E-98 T 23-04-2016 CLI_RS03345 ed81a66f2d4ccf18d30549b8584a2221 241 SUPERFAMILY SSF46689 184 234 4.93E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03345 ed81a66f2d4ccf18d30549b8584a2221 241 Pfam PF02311 AraC-like ligand binding domain 12 66 1.3E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLI_RS03345 ed81a66f2d4ccf18d30549b8584a2221 241 Gene3D G3DSA:1.10.10.60 185 235 2.2E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03345 ed81a66f2d4ccf18d30549b8584a2221 241 Gene3D G3DSA:2.60.120.10 17 73 1.4E-6 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS03345 ed81a66f2d4ccf18d30549b8584a2221 241 SUPERFAMILY SSF46689 134 182 1.3E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03345 ed81a66f2d4ccf18d30549b8584a2221 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 185 227 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLI_RS03345 ed81a66f2d4ccf18d30549b8584a2221 241 SUPERFAMILY SSF51215 13 70 4.84E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLI_RS03345 ed81a66f2d4ccf18d30549b8584a2221 241 PANTHER PTHR11019 4 239 2.3E-98 T 23-04-2016 CLI_RS03345 ed81a66f2d4ccf18d30549b8584a2221 241 Gene3D G3DSA:1.10.10.60 131 184 4.4E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03345 ed81a66f2d4ccf18d30549b8584a2221 241 SMART SM00342 148 231 1.4E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS03345 ed81a66f2d4ccf18d30549b8584a2221 241 Pfam PF12833 Helix-turn-helix domain 154 232 2.0E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 SMART SM00493 3 103 5.1E-32 T 23-04-2016 IPR006171 Toprim domain CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 281 304 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 SMART SM00437 244 510 7.8E-121 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Pfam PF01131 DNA topoisomerase 128 547 8.5E-136 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Gene3D G3DSA:3.30.65.10 616 648 2.1E-6 T 23-04-2016 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Gene3D G3DSA:3.30.65.10 573 614 3.0E-22 T 23-04-2016 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Gene3D G3DSA:3.40.50.140 1 134 3.3E-44 T 23-04-2016 IPR006171 Toprim domain CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 SUPERFAMILY SSF57783 616 649 8.5E-5 T 23-04-2016 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 PANTHER PTHR11390 1 694 0.0 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 SUPERFAMILY SSF56712 4 589 1.57E-198 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 SMART SM00436 104 192 1.3E-49 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 372 388 1.2E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 1.2E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.2E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 295 304 1.2E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 1.2E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 SUPERFAMILY SSF57783 573 613 4.59E-14 T 23-04-2016 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 PANTHER PTHR11390:SF27 1 694 0.0 T 23-04-2016 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Gene3D G3DSA:1.10.460.10 135 182 2.7E-60 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Gene3D G3DSA:1.10.460.10 457 561 2.7E-60 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Pfam PF01751 Toprim domain 5 113 1.6E-30 T 23-04-2016 IPR006171 Toprim domain CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 658 694 1.1E-4 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 577 612 1.1E-13 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 617 655 4.7E-16 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 633 54.642 T 23-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 611 1.0E-248 T 23-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Gene3D G3DSA:2.70.20.10 319 456 3.2E-33 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLI_RS12160 a29a43f90ce8f675cd97a2adfbb42615 696 Gene3D G3DSA:2.70.20.10 184 314 2.3E-29 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 354 434 1.9E-35 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 434 3.2E-181 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 134 2.0E-28 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 342 2.6E-29 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 Hamap MF_00195 GTPase Der [der]. 3 437 40.894 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 Gene3D G3DSA:3.30.300.20 359 437 4.1E-39 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 SUPERFAMILY SSF52540 6 166 2.66E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 PIRSF PIRSF006485 2 439 1.4E-182 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 SMART SM00382 175 320 2.9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 SMART SM00382 2 167 0.0032 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 Gene3D G3DSA:3.40.50.300 3 170 2.1E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 Gene3D G3DSA:3.40.50.300 173 358 6.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 Pfam PF01926 50S ribosome-binding GTPase 6 121 1.1E-29 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 Pfam PF01926 50S ribosome-binding GTPase 178 296 6.5E-27 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 74 92 2.2E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 2.2E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 PANTHER PTHR11649 3 438 1.7E-154 T 23-04-2016 CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 PANTHER PTHR11649:SF5 3 438 1.7E-154 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CLI_RS12615 05b68a1e313c92672e686efa4f17a45e 439 SUPERFAMILY SSF52540 140 438 1.95E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08940 e79f9014badf46d539662a17be29daea 334 Pfam PF00586 AIR synthase related protein, N-terminal domain 49 149 2.1E-15 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CLI_RS08940 e79f9014badf46d539662a17be29daea 334 PANTHER PTHR30303:SF0 1 334 7.1E-167 T 23-04-2016 CLI_RS08940 e79f9014badf46d539662a17be29daea 334 PANTHER PTHR30303 1 334 7.1E-167 T 23-04-2016 CLI_RS08940 e79f9014badf46d539662a17be29daea 334 Pfam PF02769 AIR synthase related protein, C-terminal domain 160 310 1.2E-17 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS08940 e79f9014badf46d539662a17be29daea 334 SUPERFAMILY SSF55326 6 152 3.66E-33 T 23-04-2016 CLI_RS08940 e79f9014badf46d539662a17be29daea 334 Gene3D G3DSA:3.90.650.10 157 306 2.7E-17 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS08940 e79f9014badf46d539662a17be29daea 334 PIRSF PIRSF005644 1 334 1.0E-119 T 23-04-2016 IPR011854 Hydrogenase expression/formation protein HypE CLI_RS08940 e79f9014badf46d539662a17be29daea 334 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 5 334 4.4E-131 T 23-04-2016 IPR011854 Hydrogenase expression/formation protein HypE CLI_RS08940 e79f9014badf46d539662a17be29daea 334 SUPERFAMILY SSF56042 156 329 1.5E-35 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS08940 e79f9014badf46d539662a17be29daea 334 Gene3D G3DSA:3.30.1330.10 17 152 2.8E-24 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CLI_RS06220 2b3d52cfa0395566f33876b1353e9f60 458 PANTHER PTHR11328:SF38 21 458 2.2E-116 T 23-04-2016 CLI_RS06220 2b3d52cfa0395566f33876b1353e9f60 458 Gene3D G3DSA:1.20.1250.20 240 428 8.2E-13 T 23-04-2016 CLI_RS06220 2b3d52cfa0395566f33876b1353e9f60 458 Gene3D G3DSA:1.20.1250.20 27 223 3.8E-14 T 23-04-2016 CLI_RS06220 2b3d52cfa0395566f33876b1353e9f60 458 Pfam PF13347 MFS/sugar transport protein 24 444 6.0E-104 T 23-04-2016 CLI_RS06220 2b3d52cfa0395566f33876b1353e9f60 458 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 22 456 2.2E-116 T 23-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CLI_RS06220 2b3d52cfa0395566f33876b1353e9f60 458 PANTHER PTHR11328 21 458 2.2E-116 T 23-04-2016 CLI_RS06220 2b3d52cfa0395566f33876b1353e9f60 458 SUPERFAMILY SSF103473 23 430 6.28E-37 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS00655 734c5ea9790f2a98ac725a8ee70e3f64 268 PIRSF PIRSF006661 1 268 2.9E-105 T 23-04-2016 IPR005232 Conserved hypothetical protein CHP00268 CLI_RS00655 734c5ea9790f2a98ac725a8ee70e3f64 268 PANTHER PTHR11807:SF17 5 268 6.8E-81 T 23-04-2016 CLI_RS00655 734c5ea9790f2a98ac725a8ee70e3f64 268 Pfam PF02540 NAD synthase 16 80 7.6E-7 T 23-04-2016 IPR022310 NAD/GMP synthase CLI_RS00655 734c5ea9790f2a98ac725a8ee70e3f64 268 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 6 259 2.6E-85 T 23-04-2016 IPR005232 Conserved hypothetical protein CHP00268 CLI_RS00655 734c5ea9790f2a98ac725a8ee70e3f64 268 Gene3D G3DSA:3.40.50.620 18 169 4.3E-29 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00655 734c5ea9790f2a98ac725a8ee70e3f64 268 SUPERFAMILY SSF52402 18 219 3.75E-35 T 23-04-2016 CLI_RS00655 734c5ea9790f2a98ac725a8ee70e3f64 268 PANTHER PTHR11807 5 268 6.8E-81 T 23-04-2016 CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 SUPERFAMILY SSF51261 520 672 2.09E-54 T 23-04-2016 IPR011055 Duplicated hybrid motif CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 528 650 6.1E-51 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 404 488 5.5E-21 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 504 4.9E-243 T 23-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 591 603 - T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 Pfam PF00367 phosphotransferase system, EIIB 432 464 3.8E-12 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 530 649 2.2E-45 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 PANTHER PTHR30009 6 513 0.0 T 23-04-2016 CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 SUPERFAMILY SSF55604 429 502 3.27E-21 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 Pfam PF02378 Phosphotransferase system, EIIC 13 344 1.2E-92 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 Gene3D G3DSA:2.70.70.10 521 670 5.2E-58 T 23-04-2016 CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 Gene3D G3DSA:3.30.1360.60 427 502 7.9E-27 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS06910 b0141f07496f4eacb64d4f964110fce6 676 PANTHER PTHR30009:SF2 6 513 0.0 T 23-04-2016 CLI_RS05365 b013dfcfba78eca4ff074c0cee529778 229 Pfam PF13545 Crp-like helix-turn-helix domain 154 220 8.0E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS05365 b013dfcfba78eca4ff074c0cee529778 229 PANTHER PTHR24567 13 228 4.9E-94 T 23-04-2016 CLI_RS05365 b013dfcfba78eca4ff074c0cee529778 229 Gene3D G3DSA:2.60.120.10 25 141 1.6E-21 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS05365 b013dfcfba78eca4ff074c0cee529778 229 SUPERFAMILY SSF46785 153 222 2.72E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05365 b013dfcfba78eca4ff074c0cee529778 229 SUPERFAMILY SSF51206 25 139 1.24E-24 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CLI_RS05365 b013dfcfba78eca4ff074c0cee529778 229 Gene3D G3DSA:1.10.10.10 161 221 5.4E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05365 b013dfcfba78eca4ff074c0cee529778 229 Pfam PF00027 Cyclic nucleotide-binding domain 35 117 4.0E-10 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CLI_RS05365 b013dfcfba78eca4ff074c0cee529778 229 PANTHER PTHR24567:SF26 13 228 4.9E-94 T 23-04-2016 CLI_RS18340 2db81dc6d9aa32da3ecc20284186ea66 220 SUPERFAMILY SSF47413 4 62 2.68E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS18340 2db81dc6d9aa32da3ecc20284186ea66 220 Pfam PF01381 Helix-turn-helix 8 60 1.3E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS18340 2db81dc6d9aa32da3ecc20284186ea66 220 SMART SM00530 7 62 1.5E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS18340 2db81dc6d9aa32da3ecc20284186ea66 220 PANTHER PTHR10245:SF43 3 210 8.3E-46 T 23-04-2016 CLI_RS18340 2db81dc6d9aa32da3ecc20284186ea66 220 PANTHER PTHR10245 3 210 8.3E-46 T 23-04-2016 CLI_RS18340 2db81dc6d9aa32da3ecc20284186ea66 220 Gene3D G3DSA:2.10.109.10 127 214 2.7E-5 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CLI_RS18340 2db81dc6d9aa32da3ecc20284186ea66 220 Gene3D G3DSA:1.10.260.40 4 62 1.9E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS18340 2db81dc6d9aa32da3ecc20284186ea66 220 SUPERFAMILY SSF51306 120 213 1.53E-10 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CLI_RS09690 b61d6fb31f5cb5b363df60c8ccddf414 125 Gene3D G3DSA:3.30.428.10 3 116 9.2E-37 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CLI_RS09690 b61d6fb31f5cb5b363df60c8ccddf414 125 PANTHER PTHR23089 2 117 4.6E-34 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CLI_RS09690 b61d6fb31f5cb5b363df60c8ccddf414 125 SUPERFAMILY SSF54197 1 109 3.56E-36 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CLI_RS09690 b61d6fb31f5cb5b363df60c8ccddf414 125 ProSitePatterns PS00892 HIT domain signature. 82 100 - T 23-04-2016 IPR019808 Histidine triad, conserved site CLI_RS09690 b61d6fb31f5cb5b363df60c8ccddf414 125 Pfam PF01230 HIT domain 10 103 4.5E-21 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CLI_RS03810 3bb375040c72dd22e5c251cb4e7425cc 71 PANTHER PTHR10204 1 67 3.4E-32 T 23-04-2016 CLI_RS03810 3bb375040c72dd22e5c251cb4e7425cc 71 Pfam PF03358 NADPH-dependent FMN reductase 1 55 4.0E-9 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLI_RS03810 3bb375040c72dd22e5c251cb4e7425cc 71 PANTHER PTHR10204:SF43 1 67 3.4E-32 T 23-04-2016 CLI_RS03810 3bb375040c72dd22e5c251cb4e7425cc 71 SUPERFAMILY SSF52218 1 68 2.1E-14 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS03810 3bb375040c72dd22e5c251cb4e7425cc 71 Gene3D G3DSA:3.40.50.360 1 67 2.7E-14 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS15220 65587d001e23dbc2b47b76e5dad42b23 415 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 413 33.145 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 CLI_RS15220 65587d001e23dbc2b47b76e5dad42b23 415 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 403 1.8E-152 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 CLI_RS15220 65587d001e23dbc2b47b76e5dad42b23 415 PANTHER PTHR11476:SF9 1 412 2.2E-212 T 23-04-2016 CLI_RS15220 65587d001e23dbc2b47b76e5dad42b23 415 PANTHER PTHR11476 1 412 2.2E-212 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CLI_RS15220 65587d001e23dbc2b47b76e5dad42b23 415 SUPERFAMILY SSF55681 4 312 4.98E-96 T 23-04-2016 CLI_RS15220 65587d001e23dbc2b47b76e5dad42b23 415 Pfam PF03129 Anticodon binding domain 333 412 2.9E-14 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS15220 65587d001e23dbc2b47b76e5dad42b23 415 PIRSF PIRSF001549 1 413 3.5E-122 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CLI_RS15220 65587d001e23dbc2b47b76e5dad42b23 415 SUPERFAMILY SSF52954 322 411 1.59E-22 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS15220 65587d001e23dbc2b47b76e5dad42b23 415 Pfam PF13393 Histidyl-tRNA synthetase 8 306 1.1E-47 T 23-04-2016 CLI_RS15220 65587d001e23dbc2b47b76e5dad42b23 415 Gene3D G3DSA:3.40.50.800 319 411 9.5E-29 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS15220 65587d001e23dbc2b47b76e5dad42b23 415 Gene3D G3DSA:3.30.930.10 1 183 1.0E-89 T 23-04-2016 CLI_RS15220 65587d001e23dbc2b47b76e5dad42b23 415 Gene3D G3DSA:3.30.930.10 219 315 1.0E-89 T 23-04-2016 CLI_RS00165 25e60b1cd8849623e8f609eb72357b6f 400 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 204 218 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS00165 25e60b1cd8849623e8f609eb72357b6f 400 PANTHER PTHR11808:SF14 2 400 5.1E-225 T 23-04-2016 CLI_RS00165 25e60b1cd8849623e8f609eb72357b6f 400 Gene3D G3DSA:3.90.1150.10 262 396 1.4E-55 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS00165 25e60b1cd8849623e8f609eb72357b6f 400 SUPERFAMILY SSF53383 28 396 2.61E-126 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS00165 25e60b1cd8849623e8f609eb72357b6f 400 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 395 1.0E-154 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS00165 25e60b1cd8849623e8f609eb72357b6f 400 PANTHER PTHR11808 2 400 5.1E-225 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS00165 25e60b1cd8849623e8f609eb72357b6f 400 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 7 396 4.1E-184 T 23-04-2016 IPR006237 L-methionine gamma-lyase GO:0018826 CLI_RS00165 25e60b1cd8849623e8f609eb72357b6f 400 Gene3D G3DSA:3.40.640.10 8 261 2.1E-99 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS00165 25e60b1cd8849623e8f609eb72357b6f 400 PIRSF PIRSF001434 1 399 9.3E-154 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS12990 618a9b6adba0e61a3540c0218dbeb6e2 256 Pfam PF06738 Putative threonine/serine exporter 9 248 1.2E-71 T 23-04-2016 IPR010619 Putative threonine/serine exporter CLI_RS12990 618a9b6adba0e61a3540c0218dbeb6e2 256 PANTHER PTHR31082 1 251 1.5E-84 T 23-04-2016 CLI_RS12990 618a9b6adba0e61a3540c0218dbeb6e2 256 PANTHER PTHR31082:SF6 1 251 1.5E-84 T 23-04-2016 CLI_RS08425 2d09b40ca5b299fbed234af58b4a8ea5 388 Gene3D G3DSA:3.40.50.1970 2 182 4.2E-59 T 23-04-2016 CLI_RS08425 2d09b40ca5b299fbed234af58b4a8ea5 388 Gene3D G3DSA:1.20.1090.10 183 383 2.8E-73 T 23-04-2016 CLI_RS08425 2d09b40ca5b299fbed234af58b4a8ea5 388 PANTHER PTHR11496:SF79 4 386 4.3E-200 T 23-04-2016 CLI_RS08425 2d09b40ca5b299fbed234af58b4a8ea5 388 PANTHER PTHR11496 4 386 4.3E-200 T 23-04-2016 CLI_RS08425 2d09b40ca5b299fbed234af58b4a8ea5 388 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 256 276 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLI_RS08425 2d09b40ca5b299fbed234af58b4a8ea5 388 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLI_RS08425 2d09b40ca5b299fbed234af58b4a8ea5 388 SUPERFAMILY SSF56796 3 384 1.1E-122 T 23-04-2016 CLI_RS08425 2d09b40ca5b299fbed234af58b4a8ea5 388 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 373 1.0E-117 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 Pfam PF00689 Cation transporting ATPase, C-terminus 674 843 1.9E-49 T 23-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 Pfam PF00690 Cation transporter/ATPase, N-terminus 6 60 8.0E-18 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 SUPERFAMILY SSF81665 204 297 2.62E-130 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 SUPERFAMILY SSF81665 5 103 2.62E-130 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 SUPERFAMILY SSF81665 640 842 2.62E-130 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 5 833 8.8E-162 T 23-04-2016 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 Gene3D G3DSA:1.20.1110.10 559 845 1.3E-121 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 Gene3D G3DSA:1.20.1110.10 44 97 1.3E-121 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 510 520 5.2E-39 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 626 5.2E-39 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 488 499 5.2E-39 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 303 317 5.2E-39 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 150 164 5.2E-39 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 590 609 5.2E-39 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PANTHER PTHR24093 7 726 0.0 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PANTHER PTHR24093 743 846 0.0 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 SUPERFAMILY SSF56784 301 321 1.19E-55 T 23-04-2016 IPR023214 HAD-like domain CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 SUPERFAMILY SSF56784 447 695 1.19E-55 T 23-04-2016 IPR023214 HAD-like domain CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 305 311 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 Gene3D G3DSA:3.40.1110.10 294 495 4.6E-58 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 Gene3D G3DSA:2.70.150.10 5 43 2.3E-45 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 Gene3D G3DSA:2.70.150.10 98 203 2.3E-45 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 SUPERFAMILY SSF81653 102 203 4.18E-29 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 71 327 1.5E-52 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 562 680 1.8E-33 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 562 578 1.5E-15 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 450 468 1.5E-15 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 590 606 1.5E-15 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 622 647 1.5E-15 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 SMART SM00831 2 65 3.3E-17 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 604 1.3E-23 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 SUPERFAMILY SSF81660 309 500 5.45E-48 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PANTHER PTHR24093:SF293 7 726 0.0 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 PANTHER PTHR24093:SF293 743 846 0.0 T 23-04-2016 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 TIGRFAM TIGR01116 ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 42 840 4.6E-212 T 23-04-2016 IPR005782 P-type ATPase, subfamily IIA, SERCA-type GO:0005388|GO:0006816|GO:0016021 CLI_RS13195 6af37e6555d5b20d914a7943c859d705 848 Pfam PF00122 E1-E2 ATPase 70 294 9.4E-70 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS04835 eda5482db183c7343624694c7fba1c93 320 PANTHER PTHR34308 1 317 1.6E-112 T 23-04-2016 CLI_RS04835 eda5482db183c7343624694c7fba1c93 320 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 320 88.346 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 CLI_RS04835 eda5482db183c7343624694c7fba1c93 320 PANTHER PTHR34308:SF1 1 317 1.6E-112 T 23-04-2016 CLI_RS04835 eda5482db183c7343624694c7fba1c93 320 Pfam PF03186 CobD/Cbib protein 13 302 2.9E-99 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 CLI_RS04835 eda5482db183c7343624694c7fba1c93 320 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 12 302 2.1E-70 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 CLI_RS08630 c879990d1738d450a96d19beac875951 211 PANTHER PTHR31157 3 209 2.5E-46 T 23-04-2016 CLI_RS08630 c879990d1738d450a96d19beac875951 211 TIGRFAM TIGR02899 spore_safA: spore coat assembly protein SafA 37 79 2.3E-20 T 23-04-2016 IPR014248 Spore coat assembly protein SafA CLI_RS08630 c879990d1738d450a96d19beac875951 211 Pfam PF00188 Cysteine-rich secretory protein family 93 208 3.8E-16 T 23-04-2016 IPR014044 CAP domain CLI_RS08630 c879990d1738d450a96d19beac875951 211 SMART SM00257 34 79 5.0E-14 T 23-04-2016 IPR018392 LysM domain CLI_RS08630 c879990d1738d450a96d19beac875951 211 Pfam PF01476 LysM domain 35 79 2.6E-12 T 23-04-2016 IPR018392 LysM domain CLI_RS08630 c879990d1738d450a96d19beac875951 211 Gene3D G3DSA:3.10.350.10 32 79 9.2E-13 T 23-04-2016 IPR018392 LysM domain CLI_RS08630 c879990d1738d450a96d19beac875951 211 SUPERFAMILY SSF55797 85 209 1.06E-21 T 23-04-2016 IPR014044 CAP domain CLI_RS08630 c879990d1738d450a96d19beac875951 211 SUPERFAMILY SSF54106 33 79 4.97E-9 T 23-04-2016 IPR018392 LysM domain CLI_RS08630 c879990d1738d450a96d19beac875951 211 Gene3D G3DSA:3.40.33.10 86 207 2.9E-8 T 23-04-2016 IPR014044 CAP domain CLI_RS09810 b5cf51dc7a206f709a4ba5a78c21b915 146 PANTHER PTHR36930 1 146 2.6E-40 T 23-04-2016 CLI_RS09810 b5cf51dc7a206f709a4ba5a78c21b915 146 Gene3D G3DSA:2.40.33.20 2 144 2.7E-28 T 23-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like CLI_RS09810 b5cf51dc7a206f709a4ba5a78c21b915 146 SUPERFAMILY SSF50800 1 144 1.88E-37 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain CLI_RS09810 b5cf51dc7a206f709a4ba5a78c21b915 146 PANTHER PTHR36930:SF1 1 146 2.6E-40 T 23-04-2016 CLI_RS14545 baa9c30ab98fd1a1bae5b00c9470f639 247 SUPERFAMILY SSF54862 7 64 4.34E-17 T 23-04-2016 CLI_RS14545 baa9c30ab98fd1a1bae5b00c9470f639 247 Pfam PF12837 4Fe-4S binding domain 5 28 1.7E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS14545 baa9c30ab98fd1a1bae5b00c9470f639 247 PANTHER PTHR24960:SF44 1 175 1.8E-54 T 23-04-2016 CLI_RS14545 baa9c30ab98fd1a1bae5b00c9470f639 247 Gene3D G3DSA:3.30.70.20 5 62 4.7E-16 T 23-04-2016 CLI_RS14545 baa9c30ab98fd1a1bae5b00c9470f639 247 PANTHER PTHR24960 1 175 1.8E-54 T 23-04-2016 CLI_RS03555 6da46f1adf47094a573550e5fc43c7e5 251 Pfam PF00005 ABC transporter 24 176 7.1E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03555 6da46f1adf47094a573550e5fc43c7e5 251 Gene3D G3DSA:3.40.50.300 1 234 9.6E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03555 6da46f1adf47094a573550e5fc43c7e5 251 PANTHER PTHR24220 3 248 4.4E-127 T 23-04-2016 CLI_RS03555 6da46f1adf47094a573550e5fc43c7e5 251 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS03555 6da46f1adf47094a573550e5fc43c7e5 251 PANTHER PTHR24220:SF534 3 248 4.4E-127 T 23-04-2016 CLI_RS03555 6da46f1adf47094a573550e5fc43c7e5 251 SUPERFAMILY SSF52540 1 232 7.99E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03555 6da46f1adf47094a573550e5fc43c7e5 251 SMART SM00382 31 224 2.6E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS00785 a0b8658ff8bb11214531cee28cd7273e 326 Gene3D G3DSA:3.40.50.620 2 187 5.8E-31 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00785 a0b8658ff8bb11214531cee28cd7273e 326 SUPERFAMILY SSF52402 2 227 6.17E-33 T 23-04-2016 CLI_RS00785 a0b8658ff8bb11214531cee28cd7273e 326 PANTHER PTHR11933:SF6 1 230 6.8E-146 T 23-04-2016 CLI_RS00785 a0b8658ff8bb11214531cee28cd7273e 326 Pfam PF05670 Domain of unknown function (DUF814) 226 305 2.4E-6 T 23-04-2016 IPR008532 Domain of unknown function DUF814 CLI_RS00785 a0b8658ff8bb11214531cee28cd7273e 326 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 3 140 3.2E-11 T 23-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 CLI_RS00785 a0b8658ff8bb11214531cee28cd7273e 326 PANTHER PTHR11933 1 230 6.8E-146 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CLI_RS00645 000c04645958fed1842fd321b0e70d3b 355 PANTHER PTHR12526 152 279 2.5E-41 T 23-04-2016 CLI_RS00645 000c04645958fed1842fd321b0e70d3b 355 Gene3D G3DSA:3.90.550.10 3 270 1.6E-80 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS00645 000c04645958fed1842fd321b0e70d3b 355 SUPERFAMILY SSF159283 285 346 4.58E-14 T 23-04-2016 CLI_RS00645 000c04645958fed1842fd321b0e70d3b 355 Pfam PF00483 Nucleotidyl transferase 4 279 1.5E-47 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CLI_RS00645 000c04645958fed1842fd321b0e70d3b 355 SUPERFAMILY SSF53448 2 278 5.63E-61 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS14430 cf91c14306e7268087c62059cd5d5d91 352 Gene3D G3DSA:3.40.50.1980 36 169 1.8E-16 T 23-04-2016 CLI_RS14430 cf91c14306e7268087c62059cd5d5d91 352 SUPERFAMILY SSF53807 40 348 3.45E-54 T 23-04-2016 CLI_RS14430 cf91c14306e7268087c62059cd5d5d91 352 PANTHER PTHR30535 11 347 1.5E-120 T 23-04-2016 CLI_RS14430 cf91c14306e7268087c62059cd5d5d91 352 PANTHER PTHR30535:SF16 11 347 1.5E-120 T 23-04-2016 CLI_RS14430 cf91c14306e7268087c62059cd5d5d91 352 Pfam PF01497 Periplasmic binding protein 103 286 1.6E-17 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CLI_RS14430 cf91c14306e7268087c62059cd5d5d91 352 Gene3D G3DSA:3.40.50.1980 170 326 2.0E-29 T 23-04-2016 CLI_RS10075 2130b2df2563c8e9f85c962c07805b88 465 Pfam PF02378 Phosphotransferase system, EIIC 137 404 1.9E-16 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS10075 2130b2df2563c8e9f85c962c07805b88 465 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 87 3.7E-31 T 23-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 CLI_RS10075 2130b2df2563c8e9f85c962c07805b88 465 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 125 456 4.5E-113 T 23-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CLI_RS10075 2130b2df2563c8e9f85c962c07805b88 465 SUPERFAMILY SSF52794 3 103 5.76E-37 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLI_RS10075 2130b2df2563c8e9f85c962c07805b88 465 PANTHER PTHR30505 1 417 0.0 T 23-04-2016 CLI_RS10075 2130b2df2563c8e9f85c962c07805b88 465 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 95 9.8E-17 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLI_RS10075 2130b2df2563c8e9f85c962c07805b88 465 PANTHER PTHR30505:SF9 1 417 0.0 T 23-04-2016 CLI_RS10075 2130b2df2563c8e9f85c962c07805b88 465 Gene3D G3DSA:3.40.50.2300 2 104 9.9E-43 T 23-04-2016 CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 Gene3D G3DSA:3.40.50.2300 55 173 1.8E-50 T 23-04-2016 CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 PANTHER PTHR30146 1 332 1.3E-140 T 23-04-2016 CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 Gene3D G3DSA:1.10.260.40 3 54 2.0E-26 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 324 4.1E-33 T 23-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 SUPERFAMILY SSF47413 3 60 8.25E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 SMART SM00354 2 72 4.1E-37 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 PANTHER PTHR30146:SF4 1 332 1.3E-140 T 23-04-2016 CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 3.08E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 3.08E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 4.9E-18 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 SUPERFAMILY SSF53822 61 331 3.34E-83 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 Gene3D G3DSA:3.40.50.2300 174 311 1.1E-45 T 23-04-2016 CLI_RS00635 42135bef3d71e4219424be38f933df8d 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 CLI_RS12020 2ec5e061bcb939a2c85a6d46ab120d64 90 Gene3D G3DSA:2.30.30.240 7 81 5.1E-12 T 23-04-2016 CLI_RS12020 2ec5e061bcb939a2c85a6d46ab120d64 90 SUPERFAMILY SSF50346 6 80 1.88E-8 T 23-04-2016 IPR011033 PRC-barrel-like CLI_RS12020 2ec5e061bcb939a2c85a6d46ab120d64 90 PANTHER PTHR40061 2 90 3.4E-43 T 23-04-2016 CLI_RS12020 2ec5e061bcb939a2c85a6d46ab120d64 90 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 7 80 2.2E-28 T 23-04-2016 IPR014238 Sporulation protein YlmC/YmxH CLI_RS12020 2ec5e061bcb939a2c85a6d46ab120d64 90 Pfam PF05239 PRC-barrel domain 4 83 6.3E-10 T 23-04-2016 IPR027275 PRC-barrel domain CLI_RS12020 2ec5e061bcb939a2c85a6d46ab120d64 90 PANTHER PTHR40061:SF1 2 90 3.4E-43 T 23-04-2016 CLI_RS05370 20f7f83f9bc2342dac0475c021cf7dbb 194 SUPERFAMILY SSF52317 1 192 1.27E-36 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS05370 20f7f83f9bc2342dac0475c021cf7dbb 194 PANTHER PTHR11019:SF125 1 169 9.5E-90 T 23-04-2016 CLI_RS05370 20f7f83f9bc2342dac0475c021cf7dbb 194 Gene3D G3DSA:3.40.50.880 1 179 1.4E-42 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS05370 20f7f83f9bc2342dac0475c021cf7dbb 194 PANTHER PTHR11019 1 169 9.5E-90 T 23-04-2016 CLI_RS05370 20f7f83f9bc2342dac0475c021cf7dbb 194 Pfam PF01965 DJ-1/PfpI family 2 177 4.9E-27 T 23-04-2016 IPR002818 DJ-1/PfpI CLI_RS01765 8b6c15da8fb7f2b1b3112599f9255ac6 337 SUPERFAMILY SSF81345 9 335 4.18E-78 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS01765 8b6c15da8fb7f2b1b3112599f9255ac6 337 Gene3D G3DSA:1.10.3470.10 10 336 4.9E-93 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS01765 8b6c15da8fb7f2b1b3112599f9255ac6 337 PANTHER PTHR30472 9 337 6.5E-126 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS01765 8b6c15da8fb7f2b1b3112599f9255ac6 337 PANTHER PTHR30472:SF16 9 337 6.5E-126 T 23-04-2016 CLI_RS01765 8b6c15da8fb7f2b1b3112599f9255ac6 337 Pfam PF01032 FecCD transport family 22 335 1.4E-86 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS05825 bf9ce2b399e06ae5284410a6a68676fd 183 Gene3D G3DSA:3.40.630.30 7 181 7.2E-43 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05825 bf9ce2b399e06ae5284410a6a68676fd 183 Pfam PF13302 Acetyltransferase (GNAT) domain 12 151 1.4E-21 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS05825 bf9ce2b399e06ae5284410a6a68676fd 183 PANTHER PTHR13256:SF39 1 183 4.4E-74 T 23-04-2016 CLI_RS05825 bf9ce2b399e06ae5284410a6a68676fd 183 SUPERFAMILY SSF55729 4 176 2.57E-42 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05825 bf9ce2b399e06ae5284410a6a68676fd 183 PANTHER PTHR13256 1 183 4.4E-74 T 23-04-2016 CLI_RS04960 351dd4383a603131042b3ab16b1e3377 192 Pfam PF13847 Methyltransferase domain 32 174 7.8E-12 T 23-04-2016 IPR025714 Methyltransferase domain CLI_RS04960 351dd4383a603131042b3ab16b1e3377 192 SUPERFAMILY SSF53335 11 160 1.11E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS04960 351dd4383a603131042b3ab16b1e3377 192 PANTHER PTHR14741:SF34 4 185 1.2E-49 T 23-04-2016 CLI_RS04960 351dd4383a603131042b3ab16b1e3377 192 Gene3D G3DSA:3.40.50.150 7 187 3.0E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS04960 351dd4383a603131042b3ab16b1e3377 192 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 37 66 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CLI_RS04960 351dd4383a603131042b3ab16b1e3377 192 PANTHER PTHR14741 4 185 1.2E-49 T 23-04-2016 CLI_RS04960 351dd4383a603131042b3ab16b1e3377 192 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 15 138 4.1E-36 T 23-04-2016 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 PANTHER PTHR11946:SF5 1 792 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 PANTHER PTHR11946:SF5 812 876 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 565 8.2E-210 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 SUPERFAMILY SSF46589 816 880 1.31E-16 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 862 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 SUPERFAMILY SSF50677 196 345 1.7E-63 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 SUPERFAMILY SSF52374 6 197 5.04E-143 T 23-04-2016 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 SUPERFAMILY SSF52374 345 577 5.04E-143 T 23-04-2016 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 SUPERFAMILY SSF47323 579 831 1.76E-71 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 816 881 2.0E-19 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 Gene3D G3DSA:3.40.50.620 9 198 1.5E-146 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 Gene3D G3DSA:3.40.50.620 345 565 1.5E-146 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 Pfam PF08264 Anticodon-binding domain of tRNA 610 757 1.8E-46 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 Gene3D G3DSA:3.90.740.10 199 341 1.7E-52 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 Gene3D G3DSA:1.10.287.380 810 879 2.1E-8 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 Hamap MF_02004 Valine--tRNA ligase [valS]. 7 881 16.042 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 PANTHER PTHR11946 1 792 0.0 T 23-04-2016 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 PANTHER PTHR11946 812 876 0.0 T 23-04-2016 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 PRINTS PR00986 Valyl-tRNA synthetase signature 350 363 1.6E-37 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 PRINTS PR00986 Valyl-tRNA synthetase signature 235 252 1.6E-37 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 PRINTS PR00986 Valyl-tRNA synthetase signature 448 469 1.6E-37 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 PRINTS PR00986 Valyl-tRNA synthetase signature 479 497 1.6E-37 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 PRINTS PR00986 Valyl-tRNA synthetase signature 41 52 1.6E-37 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CLI_RS15790 f2a29cb99e48af19fc632b0f8cca4cf6 881 Gene3D G3DSA:1.10.730.10 569 748 6.1E-67 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS07170 ddeaf5732fedb9c112b8e386e23bb030 439 Pfam PF13520 Amino acid permease 13 409 9.2E-65 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS07170 ddeaf5732fedb9c112b8e386e23bb030 439 PANTHER PTHR11785:SF261 2 438 1.5E-131 T 23-04-2016 CLI_RS07170 ddeaf5732fedb9c112b8e386e23bb030 439 PANTHER PTHR11785 2 438 1.5E-131 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS07170 ddeaf5732fedb9c112b8e386e23bb030 439 PIRSF PIRSF006060 1 439 1.3E-88 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS05315 9456a2b9a613521cf2d0ba3e7238e4ba 273 SUPERFAMILY SSF46955 4 111 9.16E-28 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS05315 9456a2b9a613521cf2d0ba3e7238e4ba 273 Gene3D G3DSA:1.10.1660.10 1 59 9.7E-24 T 23-04-2016 CLI_RS05315 9456a2b9a613521cf2d0ba3e7238e4ba 273 SMART SM00871 122 271 7.9E-11 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding CLI_RS05315 9456a2b9a613521cf2d0ba3e7238e4ba 273 PANTHER PTHR30204:SF20 1 273 1.0E-130 T 23-04-2016 CLI_RS05315 9456a2b9a613521cf2d0ba3e7238e4ba 273 Pfam PF06445 GyrI-like small molecule binding domain 125 269 5.2E-10 T 23-04-2016 IPR029442 GyrI-like small molecule binding domain CLI_RS05315 9456a2b9a613521cf2d0ba3e7238e4ba 273 SMART SM00422 5 75 5.5E-14 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS05315 9456a2b9a613521cf2d0ba3e7238e4ba 273 Pfam PF13411 MerR HTH family regulatory protein 5 72 9.3E-15 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS05315 9456a2b9a613521cf2d0ba3e7238e4ba 273 Gene3D G3DSA:3.20.80.10 121 272 4.9E-47 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS05315 9456a2b9a613521cf2d0ba3e7238e4ba 273 PANTHER PTHR30204 1 273 1.0E-130 T 23-04-2016 CLI_RS05315 9456a2b9a613521cf2d0ba3e7238e4ba 273 Gene3D G3DSA:1.10.1660.10 60 114 2.7E-6 T 23-04-2016 CLI_RS05315 9456a2b9a613521cf2d0ba3e7238e4ba 273 SUPERFAMILY SSF55136 129 269 1.2E-25 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 SUPERFAMILY SSF81665 226 319 8.76E-40 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 SUPERFAMILY SSF81665 668 856 8.76E-40 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 SUPERFAMILY SSF81665 3 115 8.76E-40 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 Gene3D G3DSA:3.40.50.1000 518 661 3.1E-30 T 23-04-2016 IPR023214 HAD-like domain CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 SUPERFAMILY SSF56784 511 663 8.71E-20 T 23-04-2016 IPR023214 HAD-like domain CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 Pfam PF00690 Cation transporter/ATPase, N-terminus 6 71 1.4E-9 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 620 639 5.1E-8 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 162 176 5.1E-8 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 518 529 5.1E-8 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 325 339 5.1E-8 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 PANTHER PTHR24093 1 860 0.0 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 445 463 2.2E-5 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 318 339 2.2E-5 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 704 725 2.2E-5 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 60 74 2.2E-5 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 SUPERFAMILY SSF81653 118 222 3.14E-24 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 Gene3D G3DSA:2.70.150.10 106 222 1.9E-32 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 Gene3D G3DSA:2.70.150.10 14 58 1.9E-32 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 Pfam PF00122 E1-E2 ATPase 83 316 1.2E-40 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 Pfam PF13246 Cation transport ATPase (P-type) 376 461 1.6E-15 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 SUPERFAMILY SSF81660 336 525 3.92E-35 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 PANTHER PTHR24093:SF293 1 860 0.0 T 23-04-2016 CLI_RS14785 f888f3a966793e65a4fc34b8f5284932 864 Gene3D G3DSA:3.40.1110.10 317 517 2.8E-38 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS04900 82af47cda0030de48947f8abfcac1e15 208 PANTHER PTHR32439 3 208 4.2E-80 T 23-04-2016 CLI_RS04900 82af47cda0030de48947f8abfcac1e15 208 SUPERFAMILY SSF63965 10 207 2.88E-72 T 23-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CLI_RS04900 82af47cda0030de48947f8abfcac1e15 208 Pfam PF02570 Precorrin-8X methylmutase 10 204 2.9E-78 T 23-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CLI_RS04900 82af47cda0030de48947f8abfcac1e15 208 Gene3D G3DSA:3.40.50.10230 4 207 2.7E-84 T 23-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CLI_RS12205 0160cd3a47d47d5d68b782f7c777349c 164 Pfam PF05239 PRC-barrel domain 92 159 3.1E-9 T 23-04-2016 IPR027275 PRC-barrel domain CLI_RS12205 0160cd3a47d47d5d68b782f7c777349c 164 Gene3D G3DSA:2.30.30.240 93 158 1.5E-21 T 23-04-2016 CLI_RS12205 0160cd3a47d47d5d68b782f7c777349c 164 SUPERFAMILY SSF50447 3 83 2.94E-18 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS12205 0160cd3a47d47d5d68b782f7c777349c 164 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 159 4.3E-45 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CLI_RS12205 0160cd3a47d47d5d68b782f7c777349c 164 Gene3D G3DSA:2.40.30.60 2 83 3.7E-17 T 23-04-2016 IPR002676 RimM protein GO:0006364 CLI_RS12205 0160cd3a47d47d5d68b782f7c777349c 164 Pfam PF01782 RimM N-terminal domain 7 83 9.2E-21 T 23-04-2016 IPR002676 RimM protein GO:0006364 CLI_RS12205 0160cd3a47d47d5d68b782f7c777349c 164 SUPERFAMILY SSF50346 93 159 9.22E-18 T 23-04-2016 IPR011033 PRC-barrel-like CLI_RS12205 0160cd3a47d47d5d68b782f7c777349c 164 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 161 22.69 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CLI_RS12205 0160cd3a47d47d5d68b782f7c777349c 164 PANTHER PTHR33692 1 162 4.0E-54 T 23-04-2016 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 SUPERFAMILY SSF51569 2 321 4.83E-144 T 23-04-2016 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 Gene3D G3DSA:3.20.20.70 2 322 2.0E-153 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 238 250 - T 23-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 PIRSF PIRSF001415 1 322 9.8E-151 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 PANTHER PTHR11458 2 323 2.9E-195 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 238 254 5.3E-60 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 293 312 5.3E-60 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 263 278 5.3E-60 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 118 132 5.3E-60 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 186 205 5.3E-60 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 148 167 5.3E-60 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 SMART SM01004 1 319 6.5E-233 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS04880 bfe2f654fb99bae916c54a13494cf231 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 318 2.4E-152 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CLI_RS03160 8308b8e9c5bac5532c8f1351c25da63b 822 PANTHER PTHR30489:SF0 1 185 1.5E-287 T 23-04-2016 CLI_RS03160 8308b8e9c5bac5532c8f1351c25da63b 822 PANTHER PTHR30489:SF0 226 821 1.5E-287 T 23-04-2016 CLI_RS03160 8308b8e9c5bac5532c8f1351c25da63b 822 Pfam PF02687 FtsX-like permease family 696 813 3.2E-13 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS03160 8308b8e9c5bac5532c8f1351c25da63b 822 Pfam PF02687 FtsX-like permease family 255 369 2.3E-17 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS03160 8308b8e9c5bac5532c8f1351c25da63b 822 PANTHER PTHR30489 1 185 1.5E-287 T 23-04-2016 CLI_RS03160 8308b8e9c5bac5532c8f1351c25da63b 822 PANTHER PTHR30489 226 821 1.5E-287 T 23-04-2016 CLI_RS13145 780069ef800b4153e944d4239d131149 102 Hamap MF_00312 V-type ATP synthase subunit F [atpF]. 2 102 16.856 T 23-04-2016 IPR022944 ATPase, V1 complex, subunit F, bacterial/archaeal CLI_RS13145 780069ef800b4153e944d4239d131149 102 SUPERFAMILY SSF159468 4 101 4.32E-26 T 23-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 CLI_RS13145 780069ef800b4153e944d4239d131149 102 Pfam PF01990 ATP synthase (F/14-kDa) subunit 4 93 4.6E-23 T 23-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 CLI_RS13145 780069ef800b4153e944d4239d131149 102 Gene3D G3DSA:3.40.50.10580 3 101 4.7E-23 T 23-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 CLI_RS06045 813e7b4e6d7c648ab80074db6561c6c2 264 Gene3D G3DSA:3.40.50.300 1 235 6.4E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06045 813e7b4e6d7c648ab80074db6561c6c2 264 PANTHER PTHR24220 3 255 2.4E-142 T 23-04-2016 CLI_RS06045 813e7b4e6d7c648ab80074db6561c6c2 264 SUPERFAMILY SSF52540 1 232 2.28E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06045 813e7b4e6d7c648ab80074db6561c6c2 264 Pfam PF00005 ABC transporter 23 177 6.5E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS06045 813e7b4e6d7c648ab80074db6561c6c2 264 SMART SM00382 31 226 3.4E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06045 813e7b4e6d7c648ab80074db6561c6c2 264 PANTHER PTHR24220:SF534 3 255 2.4E-142 T 23-04-2016 CLI_RS06045 813e7b4e6d7c648ab80074db6561c6c2 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS02800 0641e4387e1d441953ac23a0905ceba0 668 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 17 655 0.0 T 23-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CLI_RS02800 0641e4387e1d441953ac23a0905ceba0 668 SUPERFAMILY SSF56300 195 250 2.32E-5 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS02800 0641e4387e1d441953ac23a0905ceba0 668 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 15 656 40.574 T 23-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CLI_RS02800 0641e4387e1d441953ac23a0905ceba0 668 PIRSF PIRSF000906 11 657 0.0 T 23-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CLI_RS02800 0641e4387e1d441953ac23a0905ceba0 668 Gene3D G3DSA:3.60.21.10 374 432 5.6E-6 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS02800 0641e4387e1d441953ac23a0905ceba0 668 Gene3D G3DSA:3.60.21.10 201 244 5.6E-6 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS02800 0641e4387e1d441953ac23a0905ceba0 668 Gene3D G3DSA:3.60.21.10 480 486 5.6E-6 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS02800 0641e4387e1d441953ac23a0905ceba0 668 Gene3D G3DSA:3.60.21.10 525 572 5.6E-6 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS14695 89819b866fa675137c093ee9d18d863c 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 23.418 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CLI_RS14695 89819b866fa675137c093ee9d18d863c 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 23-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14695 89819b866fa675137c093ee9d18d863c 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.5E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CLI_RS14695 89819b866fa675137c093ee9d18d863c 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.5E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CLI_RS14695 89819b866fa675137c093ee9d18d863c 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.5E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CLI_RS14695 89819b866fa675137c093ee9d18d863c 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.5E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CLI_RS14695 89819b866fa675137c093ee9d18d863c 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 38 8.0E-6 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CLI_RS14695 89819b866fa675137c093ee9d18d863c 58 Pfam PF01165 Ribosomal protein S21 4 57 3.1E-24 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CLI_RS14695 89819b866fa675137c093ee9d18d863c 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 58 2.2E-23 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CLI_RS14695 89819b866fa675137c093ee9d18d863c 58 PANTHER PTHR21109 1 58 3.5E-23 T 23-04-2016 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 480 35.185 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 Pfam PF01225 Mur ligase family, catalytic domain 22 98 1.4E-13 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 Gene3D G3DSA:3.40.1190.10 101 330 7.4E-80 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 PANTHER PTHR23135 9 482 2.6E-211 T 23-04-2016 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 Gene3D G3DSA:3.40.1390.10 14 100 1.7E-24 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 Gene3D G3DSA:3.90.190.20 331 474 1.6E-53 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 Pfam PF08245 Mur ligase middle domain 110 306 6.2E-53 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 SUPERFAMILY SSF53244 327 482 2.22E-46 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 414 4.0E-21 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 SUPERFAMILY SSF63418 1 101 1.57E-22 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 20 480 4.4E-165 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 PANTHER PTHR23135:SF4 9 482 2.6E-211 T 23-04-2016 CLI_RS07515 8a26ae15bfe430afb8cb7687cd7f1a93 483 SUPERFAMILY SSF53623 101 324 1.57E-71 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS14810 8c6d8b6c0d1388989c8cda72967c910b 310 Pfam PF02769 AIR synthase related protein, C-terminal domain 132 309 9.0E-29 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS14810 8c6d8b6c0d1388989c8cda72967c910b 310 SUPERFAMILY SSF56042 126 307 2.54E-50 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS14810 8c6d8b6c0d1388989c8cda72967c910b 310 Hamap MF_00625 Selenide, water dikinase [selD]. 2 310 37.039 T 23-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CLI_RS14810 8c6d8b6c0d1388989c8cda72967c910b 310 Gene3D G3DSA:3.30.1330.10 3 126 5.2E-29 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CLI_RS14810 8c6d8b6c0d1388989c8cda72967c910b 310 Gene3D G3DSA:3.90.650.10 138 309 1.6E-18 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS14810 8c6d8b6c0d1388989c8cda72967c910b 310 PIRSF PIRSF036407 1 310 4.2E-118 T 23-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CLI_RS14810 8c6d8b6c0d1388989c8cda72967c910b 310 TIGRFAM TIGR00476 selD: selenide, water dikinase 3 278 1.9E-111 T 23-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CLI_RS14810 8c6d8b6c0d1388989c8cda72967c910b 310 Pfam PF00586 AIR synthase related protein, N-terminal domain 14 120 7.8E-20 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CLI_RS14810 8c6d8b6c0d1388989c8cda72967c910b 310 SUPERFAMILY SSF55326 3 124 5.08E-38 T 23-04-2016 CLI_RS14810 8c6d8b6c0d1388989c8cda72967c910b 310 PANTHER PTHR10256 1 310 2.5E-131 T 23-04-2016 CLI_RS13240 e21dee760e7add7b8a32d6cdd2ff23fa 286 PIRSF PIRSF003092 1 286 4.3E-95 T 23-04-2016 IPR025501 ATP binding protein MinD CLI_RS13240 e21dee760e7add7b8a32d6cdd2ff23fa 286 PANTHER PTHR13696:SF3 1 273 1.0E-95 T 23-04-2016 CLI_RS13240 e21dee760e7add7b8a32d6cdd2ff23fa 286 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 212 5.3E-27 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS13240 e21dee760e7add7b8a32d6cdd2ff23fa 286 SUPERFAMILY SSF52540 22 268 4.77E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13240 e21dee760e7add7b8a32d6cdd2ff23fa 286 PANTHER PTHR13696 1 273 1.0E-95 T 23-04-2016 CLI_RS13240 e21dee760e7add7b8a32d6cdd2ff23fa 286 Gene3D G3DSA:3.40.50.300 22 262 1.8E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08625 23dc88a0d477335dd868e38aa51e1c45 319 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 253 266 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLI_RS08625 23dc88a0d477335dd868e38aa51e1c45 319 PANTHER PTHR10584 6 319 2.8E-126 T 23-04-2016 CLI_RS08625 23dc88a0d477335dd868e38aa51e1c45 319 Gene3D G3DSA:3.40.1190.20 9 311 6.3E-62 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS08625 23dc88a0d477335dd868e38aa51e1c45 319 SUPERFAMILY SSF53613 11 309 6.7E-60 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS08625 23dc88a0d477335dd868e38aa51e1c45 319 Pfam PF00294 pfkB family carbohydrate kinase 10 298 3.9E-47 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB CLI_RS08625 23dc88a0d477335dd868e38aa51e1c45 319 PANTHER PTHR10584:SF196 6 319 2.8E-126 T 23-04-2016 CLI_RS17400 d88458729fc62f40a0bd759bc207dbb6 300 PANTHER PTHR33545 4 299 5.5E-199 T 23-04-2016 CLI_RS17400 d88458729fc62f40a0bd759bc207dbb6 300 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 21 231 2.9E-60 T 23-04-2016 IPR003740 Uncharacterised membrane protein YitT CLI_RS17400 d88458729fc62f40a0bd759bc207dbb6 300 PIRSF PIRSF006483 8 297 2.6E-83 T 23-04-2016 IPR003740 Uncharacterised membrane protein YitT CLI_RS17400 d88458729fc62f40a0bd759bc207dbb6 300 PANTHER PTHR33545:SF1 4 299 5.5E-199 T 23-04-2016 CLI_RS17400 d88458729fc62f40a0bd759bc207dbb6 300 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 236 290 1.3E-21 T 23-04-2016 IPR019264 Domain of unknown function DUF2179 CLI_RS12065 d4616029f34086932cb49728049bb39e 105 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 8 95 4.7E-15 T 23-04-2016 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 CLI_RS12065 d4616029f34086932cb49728049bb39e 105 Gene3D G3DSA:3.30.1330.30 3 97 5.6E-16 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CLI_RS12065 d4616029f34086932cb49728049bb39e 105 SUPERFAMILY SSF55315 4 100 1.02E-21 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CLI_RS09900 6ca5c99b4ac64baeadeaff120a920b7d 208 Gene3D G3DSA:3.40.50.360 1 191 4.5E-42 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS09900 6ca5c99b4ac64baeadeaff120a920b7d 208 Pfam PF03358 NADPH-dependent FMN reductase 1 152 7.9E-28 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLI_RS09900 6ca5c99b4ac64baeadeaff120a920b7d 208 SUPERFAMILY SSF52218 1 185 6.99E-41 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS09900 6ca5c99b4ac64baeadeaff120a920b7d 208 PANTHER PTHR10204 1 204 1.1E-118 T 23-04-2016 CLI_RS09900 6ca5c99b4ac64baeadeaff120a920b7d 208 PANTHER PTHR10204:SF43 1 204 1.1E-118 T 23-04-2016 CLI_RS00895 d22f9ce81c627341bace1f4eb7ded38b 79 Pfam PF00137 ATP synthase subunit C 13 75 8.6E-18 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLI_RS00895 d22f9ce81c627341bace1f4eb7ded38b 79 PRINTS PR00124 ATP synthase C subunit signature 13 32 2.0E-24 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CLI_RS00895 d22f9ce81c627341bace1f4eb7ded38b 79 PRINTS PR00124 ATP synthase C subunit signature 34 49 2.0E-24 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CLI_RS00895 d22f9ce81c627341bace1f4eb7ded38b 79 PRINTS PR00124 ATP synthase C subunit signature 51 76 2.0E-24 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CLI_RS00895 d22f9ce81c627341bace1f4eb7ded38b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 41 62 - T 23-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site CLI_RS00895 d22f9ce81c627341bace1f4eb7ded38b 79 SUPERFAMILY SSF81333 6 78 8.24E-21 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLI_RS00895 d22f9ce81c627341bace1f4eb7ded38b 79 PANTHER PTHR10031 7 79 4.4E-20 T 23-04-2016 CLI_RS00895 d22f9ce81c627341bace1f4eb7ded38b 79 Gene3D G3DSA:1.20.20.10 5 78 2.5E-26 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CLI_RS00895 d22f9ce81c627341bace1f4eb7ded38b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 21 77 1.2E-20 T 23-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CLI_RS00895 d22f9ce81c627341bace1f4eb7ded38b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 11 78 17.533 T 23-04-2016 CLI_RS15870 af207bad87f3684f00be2070be566f93 541 Gene3D G3DSA:3.40.50.300 70 138 4.5E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15870 af207bad87f3684f00be2070be566f93 541 Gene3D G3DSA:3.40.50.300 275 471 4.5E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15870 af207bad87f3684f00be2070be566f93 541 PANTHER PTHR37937:SF1 59 488 3.4E-12 T 23-04-2016 CLI_RS15870 af207bad87f3684f00be2070be566f93 541 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 41 474 5.9E-62 T 23-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 CLI_RS15870 af207bad87f3684f00be2070be566f93 541 SUPERFAMILY SSF52540 68 467 9.61E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15870 af207bad87f3684f00be2070be566f93 541 PANTHER PTHR37937 59 488 3.4E-12 T 23-04-2016 CLI_RS01035 6f1d150ad8b080cb1e513477218e5262 453 Gene3D G3DSA:3.40.630.10 212 407 3.3E-47 T 23-04-2016 CLI_RS01035 6f1d150ad8b080cb1e513477218e5262 453 Gene3D G3DSA:3.40.630.10 26 85 3.3E-47 T 23-04-2016 CLI_RS01035 6f1d150ad8b080cb1e513477218e5262 453 Pfam PF04389 Peptidase family M28 213 403 1.2E-40 T 23-04-2016 IPR007484 Peptidase M28 CLI_RS01035 6f1d150ad8b080cb1e513477218e5262 453 PANTHER PTHR12147 30 68 6.8E-41 T 23-04-2016 CLI_RS01035 6f1d150ad8b080cb1e513477218e5262 453 PANTHER PTHR12147 158 398 6.8E-41 T 23-04-2016 CLI_RS01035 6f1d150ad8b080cb1e513477218e5262 453 SUPERFAMILY SSF53187 26 76 2.3E-50 T 23-04-2016 CLI_RS01035 6f1d150ad8b080cb1e513477218e5262 453 SUPERFAMILY SSF53187 197 407 2.3E-50 T 23-04-2016 CLI_RS01755 479177c1120e6abdd57fdaac04e5f158 309 Gene3D G3DSA:3.40.50.1980 35 139 5.4E-18 T 23-04-2016 CLI_RS01755 479177c1120e6abdd57fdaac04e5f158 309 Gene3D G3DSA:3.40.50.1980 140 304 7.3E-20 T 23-04-2016 CLI_RS01755 479177c1120e6abdd57fdaac04e5f158 309 PANTHER PTHR30532 1 306 1.8E-82 T 23-04-2016 CLI_RS01755 479177c1120e6abdd57fdaac04e5f158 309 PANTHER PTHR30532:SF1 1 306 1.8E-82 T 23-04-2016 CLI_RS01755 479177c1120e6abdd57fdaac04e5f158 309 SUPERFAMILY SSF53807 35 299 1.69E-38 T 23-04-2016 CLI_RS01755 479177c1120e6abdd57fdaac04e5f158 309 Pfam PF01497 Periplasmic binding protein 98 279 1.7E-18 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 Pfam PF12838 4Fe-4S dicluster domain 688 755 1.3E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 SUPERFAMILY SSF52518 3 257 3.24E-78 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 SUPERFAMILY SSF54862 665 829 2.09E-22 T 23-04-2016 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 Gene3D G3DSA:3.40.50.970 785 1191 1.2E-153 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 246 2.7E-80 T 23-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 PANTHER PTHR32154:SF0 2 896 0.0 T 23-04-2016 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 PANTHER PTHR32154:SF0 922 1192 0.0 T 23-04-2016 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 Gene3D G3DSA:3.40.50.970 2 257 2.4E-113 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 743 754 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 Gene3D G3DSA:3.40.920.10 415 622 9.1E-90 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 SUPERFAMILY SSF52922 258 412 8.71E-49 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 4 1191 0.0 T 23-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 Pfam PF10371 Domain of unknown function 630 678 3.1E-26 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 268 373 1.1E-16 T 23-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 978 1089 2.6E-8 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 Gene3D G3DSA:4.10.780.10 630 668 1.4E-19 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 424 607 1.1E-31 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 SMART SM00890 620 679 1.6E-35 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 Gene3D G3DSA:3.40.50.920 258 412 6.4E-65 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 PIRSF PIRSF000159 1 1192 0.0 T 23-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 SUPERFAMILY SSF53323 415 668 5.1E-88 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 Gene3D G3DSA:3.30.70.20 672 777 3.6E-20 T 23-04-2016 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 PANTHER PTHR32154 2 896 0.0 T 23-04-2016 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 PANTHER PTHR32154 922 1192 0.0 T 23-04-2016 CLI_RS13720 8f27b92b47257629bd301f830298b116 1192 SUPERFAMILY SSF52518 784 1191 7.37E-129 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS13570 11a60c72f5f8291d52db88ff2c1f0786 599 Pfam PF01973 Protein of unknown function DUF115 197 362 3.1E-49 T 23-04-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CLI_RS13570 11a60c72f5f8291d52db88ff2c1f0786 599 PANTHER PTHR41786:SF1 20 587 1.6E-46 T 23-04-2016 CLI_RS13570 11a60c72f5f8291d52db88ff2c1f0786 599 PANTHER PTHR41786 20 587 1.6E-46 T 23-04-2016 CLI_RS11235 d6307999c26f0bf61429823e8d48153f 272 Gene3D G3DSA:1.10.1660.10 2 117 1.4E-22 T 23-04-2016 CLI_RS11235 d6307999c26f0bf61429823e8d48153f 272 Pfam PF06445 GyrI-like small molecule binding domain 120 270 2.2E-16 T 23-04-2016 IPR029442 GyrI-like small molecule binding domain CLI_RS11235 d6307999c26f0bf61429823e8d48153f 272 SUPERFAMILY SSF46955 2 106 2.71E-21 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS11235 d6307999c26f0bf61429823e8d48153f 272 SMART SM00422 2 72 9.5E-12 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS11235 d6307999c26f0bf61429823e8d48153f 272 Gene3D G3DSA:3.20.80.10 120 272 9.6E-18 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS11235 d6307999c26f0bf61429823e8d48153f 272 PANTHER PTHR30204 1 272 3.6E-185 T 23-04-2016 CLI_RS11235 d6307999c26f0bf61429823e8d48153f 272 SMART SM00871 119 270 1.4E-28 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding CLI_RS11235 d6307999c26f0bf61429823e8d48153f 272 PANTHER PTHR30204:SF23 1 272 3.6E-185 T 23-04-2016 CLI_RS11235 d6307999c26f0bf61429823e8d48153f 272 Pfam PF13411 MerR HTH family regulatory protein 3 71 3.7E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS11235 d6307999c26f0bf61429823e8d48153f 272 SUPERFAMILY SSF55136 120 272 3.66E-20 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 SUPERFAMILY SSF49899 866 1072 7.39E-52 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 SUPERFAMILY SSF50386 1074 1277 1.99E-66 T 23-04-2016 IPR011065 Kunitz inhibitor ST1-like CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 SUPERFAMILY SSF55486 2 532 1.61E-185 T 23-04-2016 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 Pfam PF07952 Clostridium neurotoxin, Translocation domain 538 856 9.1E-108 T 23-04-2016 IPR012500 Clostridium neurotoxin, translocation GO:0004222|GO:0005576|GO:0008270|GO:0009405 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 Pfam PF07951 Clostridium neurotoxin, C-terminal receptor binding 1085 1277 1.6E-34 T 23-04-2016 IPR013104 Clostridium neurotoxin, receptor-binding C-terminal CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 Pfam PF07953 Clostridium neurotoxin, N-terminal receptor binding 878 1072 3.8E-78 T 23-04-2016 IPR012928 Clostridium neurotoxin, receptor binding N-terminal GO:0004222|GO:0005576|GO:0009405|GO:0050827|GO:0051609 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 PRINTS PR00760 Bontoxilysin signature 97 119 5.4E-36 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 PRINTS PR00760 Bontoxilysin signature 7 23 5.4E-36 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 PRINTS PR00760 Bontoxilysin signature 34 50 5.4E-36 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 PRINTS PR00760 Bontoxilysin signature 217 229 5.4E-36 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 PRINTS PR00760 Bontoxilysin signature 263 279 5.4E-36 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 PRINTS PR00760 Bontoxilysin signature 72 88 5.4E-36 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 Gene3D G3DSA:2.60.120.200 867 1089 5.7E-64 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 Gene3D G3DSA:1.20.1120.10 444 476 1.2E-131 T 23-04-2016 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 Gene3D G3DSA:1.20.1120.10 534 836 1.2E-131 T 23-04-2016 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 Pfam PF01742 Clostridial neurotoxin zinc protease 4 409 1.0E-108 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 Gene3D G3DSA:3.90.1240.10 1 426 7.4E-167 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 Gene3D G3DSA:2.80.10.50 1090 1277 3.6E-63 T 23-04-2016 CLI_RS04085 cf9e28dd6a5a3a68e9d0ca3bb5ebbf02 1278 SUPERFAMILY SSF58091 537 867 4.45E-126 T 23-04-2016 CLI_RS07880 97b24754bd396bf1e9b59a6eec9b0c61 276 SUPERFAMILY SSF51621 3 197 1.57E-85 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLI_RS07880 97b24754bd396bf1e9b59a6eec9b0c61 276 Gene3D G3DSA:1.20.5.460 253 274 8.8E-7 T 23-04-2016 CLI_RS07880 97b24754bd396bf1e9b59a6eec9b0c61 276 PIRSF PIRSF034452 1 276 2.9E-149 T 23-04-2016 IPR009215 TIM-barrel domain, IGPS-like CLI_RS07880 97b24754bd396bf1e9b59a6eec9b0c61 276 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 8 274 6.1E-134 T 23-04-2016 IPR009215 TIM-barrel domain, IGPS-like CLI_RS07880 97b24754bd396bf1e9b59a6eec9b0c61 276 PANTHER PTHR31862 14 276 8.9E-111 T 23-04-2016 CLI_RS07880 97b24754bd396bf1e9b59a6eec9b0c61 276 Gene3D G3DSA:3.20.20.70 1 252 1.5E-132 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS08910 08647f9aa150be25ccb84f0e1ba54526 103 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 102 22.854 T 23-04-2016 IPR002765 Uncharacterised protein family UPF0145 CLI_RS08910 08647f9aa150be25ccb84f0e1ba54526 103 Gene3D G3DSA:3.30.110.70 1 102 7.3E-33 T 23-04-2016 IPR002765 Uncharacterised protein family UPF0145 CLI_RS08910 08647f9aa150be25ccb84f0e1ba54526 103 PANTHER PTHR34068 1 101 1.2E-38 T 23-04-2016 CLI_RS08910 08647f9aa150be25ccb84f0e1ba54526 103 SUPERFAMILY SSF117782 1 103 2.35E-32 T 23-04-2016 IPR002765 Uncharacterised protein family UPF0145 CLI_RS08910 08647f9aa150be25ccb84f0e1ba54526 103 Pfam PF01906 Putative heavy-metal-binding 1 101 2.4E-34 T 23-04-2016 IPR002765 Uncharacterised protein family UPF0145 CLI_RS08910 08647f9aa150be25ccb84f0e1ba54526 103 PANTHER PTHR34068:SF3 1 101 1.2E-38 T 23-04-2016 CLI_RS12785 185560820c252534dee3f386e90e07cd 405 Pfam PF16325 Peptidase family U32 C-terminal domain 320 401 8.7E-19 T 23-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS12785 185560820c252534dee3f386e90e07cd 405 PANTHER PTHR30217 1 405 5.0E-219 T 23-04-2016 CLI_RS12785 185560820c252534dee3f386e90e07cd 405 Pfam PF01136 Peptidase family U32 76 309 2.9E-102 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS12785 185560820c252534dee3f386e90e07cd 405 PANTHER PTHR30217:SF6 1 405 5.0E-219 T 23-04-2016 CLI_RS12785 185560820c252534dee3f386e90e07cd 405 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS03970 528d223d6fd64bdf574a9a02ee00caf3 179 Gene3D G3DSA:1.10.10.10 116 177 5.9E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03970 528d223d6fd64bdf574a9a02ee00caf3 179 Pfam PF04542 Sigma-70 region 2 20 71 1.3E-4 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS03970 528d223d6fd64bdf574a9a02ee00caf3 179 SUPERFAMILY SSF88659 104 177 2.99E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS03970 528d223d6fd64bdf574a9a02ee00caf3 179 PANTHER PTHR30385 1 178 4.4E-26 T 23-04-2016 CLI_RS03970 528d223d6fd64bdf574a9a02ee00caf3 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 175 2.6E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS03970 528d223d6fd64bdf574a9a02ee00caf3 179 SUPERFAMILY SSF88946 3 76 3.14E-13 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS03970 528d223d6fd64bdf574a9a02ee00caf3 179 Gene3D G3DSA:1.10.1740.10 3 91 7.1E-9 T 23-04-2016 CLI_RS07730 8684bae80e166fbda3d094a45515a971 339 Gene3D G3DSA:3.20.20.70 1 330 1.7E-92 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS07730 8684bae80e166fbda3d094a45515a971 339 PANTHER PTHR22893:SF53 1 339 8.9E-167 T 23-04-2016 CLI_RS07730 8684bae80e166fbda3d094a45515a971 339 SUPERFAMILY SSF51395 1 328 6.41E-83 T 23-04-2016 CLI_RS07730 8684bae80e166fbda3d094a45515a971 339 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 317 2.1E-56 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CLI_RS07730 8684bae80e166fbda3d094a45515a971 339 PANTHER PTHR22893 1 339 8.9E-167 T 23-04-2016 CLI_RS10080 e8eae51002907c70c4104de4468c8548 307 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 304 5.5E-95 T 23-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 CLI_RS10080 e8eae51002907c70c4104de4468c8548 307 PIRSF PIRSF000535 1 306 7.8E-73 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CLI_RS10080 e8eae51002907c70c4104de4468c8548 307 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 304 1.3E-93 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CLI_RS10080 e8eae51002907c70c4104de4468c8548 307 SUPERFAMILY SSF53613 1 285 4.83E-62 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS10080 e8eae51002907c70c4104de4468c8548 307 PANTHER PTHR10584 1 288 3.6E-158 T 23-04-2016 CLI_RS10080 e8eae51002907c70c4104de4468c8548 307 PANTHER PTHR10584:SF197 1 288 3.6E-158 T 23-04-2016 CLI_RS10080 e8eae51002907c70c4104de4468c8548 307 Gene3D G3DSA:3.40.1190.20 33 306 2.0E-69 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS10080 e8eae51002907c70c4104de4468c8548 307 Pfam PF00294 pfkB family carbohydrate kinase 11 288 2.4E-46 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB CLI_RS10965 94d8a35e41288fe8f6755042bdd118ab 349 Pfam PF01012 Electron transfer flavoprotein domain 13 192 2.8E-50 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS10965 94d8a35e41288fe8f6755042bdd118ab 349 SUPERFAMILY SSF52467 211 333 2.18E-47 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS10965 94d8a35e41288fe8f6755042bdd118ab 349 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 213 296 1.2E-35 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CLI_RS10965 94d8a35e41288fe8f6755042bdd118ab 349 PIRSF PIRSF000089 9 337 1.6E-121 T 23-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 CLI_RS10965 94d8a35e41288fe8f6755042bdd118ab 349 PANTHER PTHR10909 145 348 9.6E-53 T 23-04-2016 CLI_RS10965 94d8a35e41288fe8f6755042bdd118ab 349 PANTHER PTHR10909:SF294 145 348 9.6E-53 T 23-04-2016 CLI_RS10965 94d8a35e41288fe8f6755042bdd118ab 349 Gene3D G3DSA:3.40.50.1220 207 333 2.3E-56 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS10965 94d8a35e41288fe8f6755042bdd118ab 349 SUPERFAMILY SSF52402 11 207 3.14E-61 T 23-04-2016 CLI_RS10965 94d8a35e41288fe8f6755042bdd118ab 349 Gene3D G3DSA:3.40.50.620 11 206 2.5E-82 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS10965 94d8a35e41288fe8f6755042bdd118ab 349 SMART SM00893 13 202 2.4E-59 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS15900 7b2b307387e9629bc7b43b3a19562700 300 SMART SM00701 9 126 1.7E-4 T 23-04-2016 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 CLI_RS15900 7b2b307387e9629bc7b43b3a19562700 300 Pfam PF08239 Bacterial SH3 domain 248 298 2.1E-11 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS15900 7b2b307387e9629bc7b43b3a19562700 300 PANTHER PTHR11022:SF41 34 142 8.8E-24 T 23-04-2016 CLI_RS15900 7b2b307387e9629bc7b43b3a19562700 300 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 22 132 4.4E-16 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CLI_RS15900 7b2b307387e9629bc7b43b3a19562700 300 SMART SM00287 239 296 8.8E-6 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS15900 7b2b307387e9629bc7b43b3a19562700 300 SMART SM00287 163 226 0.15 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS15900 7b2b307387e9629bc7b43b3a19562700 300 SUPERFAMILY SSF55846 12 134 1.83E-35 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CLI_RS15900 7b2b307387e9629bc7b43b3a19562700 300 Gene3D G3DSA:3.40.80.10 16 135 4.2E-38 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CLI_RS15900 7b2b307387e9629bc7b43b3a19562700 300 SMART SM00644 8 132 2.7E-10 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CLI_RS15900 7b2b307387e9629bc7b43b3a19562700 300 PANTHER PTHR11022 34 142 8.8E-24 T 23-04-2016 IPR015510 Peptidoglycan recognition protein GO:0008745|GO:0009253 CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 Pfam PF00672 HAMP domain 172 237 1.1E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 Gene3D G3DSA:3.30.450.20 45 166 9.3E-11 T 23-04-2016 CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 SUPERFAMILY SSF58104 278 545 2.09E-63 T 23-04-2016 CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 SUPERFAMILY SSF58104 211 245 2.09E-63 T 23-04-2016 CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 PANTHER PTHR32089 314 549 1.3E-242 T 23-04-2016 CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 PANTHER PTHR32089 60 296 1.3E-242 T 23-04-2016 CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 PANTHER PTHR32089:SF61 314 549 1.3E-242 T 23-04-2016 CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 PANTHER PTHR32089:SF61 60 296 1.3E-242 T 23-04-2016 CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 SMART SM00304 191 243 3.8E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 529 6.9E-44 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 Gene3D G3DSA:1.10.287.950 287 504 6.5E-49 T 23-04-2016 CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 SUPERFAMILY SSF103190 44 165 5.1E-14 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS10120 7986d13cc416d56614c8f2f8f48cd6b7 549 SMART SM00283 272 547 1.2E-61 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS02740 dce62d6f5aef95be3f3fbcfc6bbdd4e6 317 PANTHER PTHR26402:SF151 2 155 6.8E-26 T 23-04-2016 CLI_RS02740 dce62d6f5aef95be3f3fbcfc6bbdd4e6 317 SMART SM00448 2 115 1.7E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS02740 dce62d6f5aef95be3f3fbcfc6bbdd4e6 317 PANTHER PTHR26402 2 155 6.8E-26 T 23-04-2016 CLI_RS02740 dce62d6f5aef95be3f3fbcfc6bbdd4e6 317 Gene3D G3DSA:3.40.50.2300 3 134 1.9E-24 T 23-04-2016 CLI_RS02740 dce62d6f5aef95be3f3fbcfc6bbdd4e6 317 Pfam PF00072 Response regulator receiver domain 4 115 2.2E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS02740 dce62d6f5aef95be3f3fbcfc6bbdd4e6 317 SUPERFAMILY SSF52172 3 127 2.42E-24 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS02740 dce62d6f5aef95be3f3fbcfc6bbdd4e6 317 Gene3D G3DSA:3.30.70.270 228 310 8.5E-4 T 23-04-2016 CLI_RS04415 c7ce47ce86736d1054cf521b4b857d35 170 Pfam PF04542 Sigma-70 region 2 22 88 7.6E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS04415 c7ce47ce86736d1054cf521b4b857d35 170 PANTHER PTHR30173:SF32 1 169 8.8E-79 T 23-04-2016 CLI_RS04415 c7ce47ce86736d1054cf521b4b857d35 170 Pfam PF04545 Sigma-70, region 4 117 165 1.5E-11 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS04415 c7ce47ce86736d1054cf521b4b857d35 170 SUPERFAMILY SSF88946 1 97 2.56E-21 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS04415 c7ce47ce86736d1054cf521b4b857d35 170 Gene3D G3DSA:1.10.1740.10 2 104 4.2E-24 T 23-04-2016 CLI_RS04415 c7ce47ce86736d1054cf521b4b857d35 170 SUPERFAMILY SSF88659 103 168 1.57E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS04415 c7ce47ce86736d1054cf521b4b857d35 170 PANTHER PTHR30173 1 169 8.8E-79 T 23-04-2016 CLI_RS04415 c7ce47ce86736d1054cf521b4b857d35 170 Gene3D G3DSA:1.10.10.10 105 169 3.5E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04415 c7ce47ce86736d1054cf521b4b857d35 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 167 3.3E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS04415 c7ce47ce86736d1054cf521b4b857d35 170 TIGRFAM TIGR02954 Sig70_famx3: RNA polymerase sigma-70 factor, TIGR02954 family 1 169 5.6E-73 T 23-04-2016 IPR014300 RNA polymerase sigma-V type CLI_RS16835 5387dc73d5a3e7a6d308a56704b049f1 407 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 43 399 1.5E-79 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS16835 5387dc73d5a3e7a6d308a56704b049f1 407 PANTHER PTHR30548:SF4 1 407 1.5E-286 T 23-04-2016 CLI_RS16835 5387dc73d5a3e7a6d308a56704b049f1 407 PANTHER PTHR30548 1 407 1.5E-286 T 23-04-2016 CLI_RS09270 5cb24e02884ba4e85692c0a690a7c035 200 Pfam PF04630 Phage tail tube protein 48 185 5.6E-6 T 23-04-2016 IPR006724 Phage tail tube protein 1 CLI_RS09270 5cb24e02884ba4e85692c0a690a7c035 200 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 9 188 1.4E-34 T 23-04-2016 IPR006490 Phage major tail protein, phi13 family CLI_RS04615 7b7b383c262db0dd6f4aefc3622bd742 365 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 57 99 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLI_RS04615 7b7b383c262db0dd6f4aefc3622bd742 365 SUPERFAMILY SSF46689 56 108 8.51E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04615 7b7b383c262db0dd6f4aefc3622bd742 365 SMART SM00342 20 103 1.5E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS04615 7b7b383c262db0dd6f4aefc3622bd742 365 Gene3D G3DSA:1.10.10.60 5 56 4.1E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04615 7b7b383c262db0dd6f4aefc3622bd742 365 Gene3D G3DSA:1.10.10.60 57 109 4.9E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04615 7b7b383c262db0dd6f4aefc3622bd742 365 PANTHER PTHR11019 5 111 8.0E-28 T 23-04-2016 CLI_RS04615 7b7b383c262db0dd6f4aefc3622bd742 365 Pfam PF12833 Helix-turn-helix domain 26 104 5.6E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS04615 7b7b383c262db0dd6f4aefc3622bd742 365 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 6.5E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS04615 7b7b383c262db0dd6f4aefc3622bd742 365 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 6.5E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS04615 7b7b383c262db0dd6f4aefc3622bd742 365 SUPERFAMILY SSF46689 5 54 1.08E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04615 7b7b383c262db0dd6f4aefc3622bd742 365 PANTHER PTHR11019:SF56 5 111 8.0E-28 T 23-04-2016 CLI_RS17350 4529efc56945b5b31b24f03f128b5fab 298 PANTHER PTHR37294 2 298 1.4E-120 T 23-04-2016 CLI_RS17350 4529efc56945b5b31b24f03f128b5fab 298 Gene3D G3DSA:2.40.50.140 3 93 1.8E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17350 4529efc56945b5b31b24f03f128b5fab 298 SUPERFAMILY SSF50249 2 103 1.26E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17350 4529efc56945b5b31b24f03f128b5fab 298 PANTHER PTHR37294:SF1 2 298 1.4E-120 T 23-04-2016 CLI_RS17350 4529efc56945b5b31b24f03f128b5fab 298 SUPERFAMILY SSF109604 146 287 5.58E-14 T 23-04-2016 CLI_RS17350 4529efc56945b5b31b24f03f128b5fab 298 Gene3D G3DSA:1.10.3210.10 157 287 3.0E-11 T 23-04-2016 IPR006674 HD domain CLI_RS17350 4529efc56945b5b31b24f03f128b5fab 298 Pfam PF01966 HD domain 165 287 5.0E-7 T 23-04-2016 IPR006674 HD domain CLI_RS17350 4529efc56945b5b31b24f03f128b5fab 298 Pfam PF01336 OB-fold nucleic acid binding domain 17 89 1.3E-6 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLI_RS18570 5ab492e0c7e687366e66f45a374b1a30 308 Pfam PF03060 Nitronate monooxygenase 5 299 8.6E-77 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CLI_RS18570 5ab492e0c7e687366e66f45a374b1a30 308 TIGRFAM TIGR03151 enACPred_II: putative enoyl-[acyl-carrier-protein] reductase II 6 303 2.6E-154 T 23-04-2016 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative CLI_RS18570 5ab492e0c7e687366e66f45a374b1a30 308 Gene3D G3DSA:3.20.20.70 8 295 6.5E-80 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS18570 5ab492e0c7e687366e66f45a374b1a30 308 SUPERFAMILY SSF51412 8 304 7.78E-81 T 23-04-2016 CLI_RS18570 5ab492e0c7e687366e66f45a374b1a30 308 PANTHER PTHR32332 3 306 8.9E-134 T 23-04-2016 CLI_RS18570 5ab492e0c7e687366e66f45a374b1a30 308 PANTHER PTHR32332:SF20 3 306 8.9E-134 T 23-04-2016 CLI_RS18740 b48581c832fb9841519b63039df35f0c 80 PRINTS PR00974 Ribosomal protein S18 family signature 35 45 3.6E-19 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18740 b48581c832fb9841519b63039df35f0c 80 PRINTS PR00974 Ribosomal protein S18 family signature 67 77 3.6E-19 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18740 b48581c832fb9841519b63039df35f0c 80 PRINTS PR00974 Ribosomal protein S18 family signature 45 52 3.6E-19 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18740 b48581c832fb9841519b63039df35f0c 80 PRINTS PR00974 Ribosomal protein S18 family signature 53 67 3.6E-19 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18740 b48581c832fb9841519b63039df35f0c 80 TIGRFAM TIGR00165 S18: ribosomal protein bS18 13 79 5.9E-34 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18740 b48581c832fb9841519b63039df35f0c 80 Pfam PF01084 Ribosomal protein S18 25 75 1.9E-28 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18740 b48581c832fb9841519b63039df35f0c 80 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 28 80 3.0E-23 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18740 b48581c832fb9841519b63039df35f0c 80 Gene3D G3DSA:4.10.640.10 15 79 9.0E-34 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18740 b48581c832fb9841519b63039df35f0c 80 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 4 80 22.89 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18740 b48581c832fb9841519b63039df35f0c 80 SUPERFAMILY SSF46911 7 79 4.84E-30 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18740 b48581c832fb9841519b63039df35f0c 80 ProSitePatterns PS00057 Ribosomal protein S18 signature. 28 51 - T 23-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18740 b48581c832fb9841519b63039df35f0c 80 PANTHER PTHR13479 9 79 5.3E-29 T 23-04-2016 CLI_RS10850 a9625733c111e9d7252a1b8f244a6e54 432 Pfam PF03787 RAMP superfamily 145 308 4.0E-14 T 23-04-2016 IPR005537 CRISPR type III-associated RAMP protein CLI_RS10850 a9625733c111e9d7252a1b8f244a6e54 432 PANTHER PTHR39965:SF1 109 316 6.8E-23 T 23-04-2016 CLI_RS10850 a9625733c111e9d7252a1b8f244a6e54 432 PANTHER PTHR39965 109 316 6.8E-23 T 23-04-2016 CLI_RS10850 a9625733c111e9d7252a1b8f244a6e54 432 TIGRFAM TIGR01898 cas_TM1791_cmr6: CRISPR type III-B/RAMP module RAMP protein Cmr6 127 308 8.1E-35 T 23-04-2016 IPR010172 CRISPR-associated protein, TM1791 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 Gene3D G3DSA:1.10.10.10 579 634 4.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 PANTHER PTHR23115:SF129 2 282 9.3E-210 T 23-04-2016 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 PANTHER PTHR23115:SF129 303 367 9.3E-210 T 23-04-2016 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 PANTHER PTHR23115:SF129 511 562 9.3E-210 T 23-04-2016 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 164 4.8E-15 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 SUPERFAMILY SSF52540 3 195 9.88E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 29 44 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 Gene3D G3DSA:3.40.50.300 4 184 1.9E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 Pfam PF03144 Elongation factor Tu domain 2 194 260 1.6E-12 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 Pfam PF00009 Elongation factor Tu GTP binding domain 3 168 2.2E-34 T 23-04-2016 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 SUPERFAMILY SSF50447 175 260 3.93E-25 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 PANTHER PTHR23115 2 282 9.3E-210 T 23-04-2016 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 PANTHER PTHR23115 303 367 9.3E-210 T 23-04-2016 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 PANTHER PTHR23115 511 562 9.3E-210 T 23-04-2016 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 Gene3D G3DSA:1.10.10.10 516 573 3.6E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 Gene3D G3DSA:2.40.30.10 185 260 3.9E-30 T 23-04-2016 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 SUPERFAMILY SSF46785 515 573 3.54E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 4 634 5.7E-118 T 23-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 Gene3D G3DSA:1.10.10.10 440 506 2.3E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 SUPERFAMILY SSF46785 584 634 7.48E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 Pfam PF09107 Elongation factor SelB, winged helix 589 634 2.1E-20 T 23-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 Pfam PF09106 Elongation factor SelB, winged helix 451 505 1.9E-13 T 23-04-2016 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 Gene3D G3DSA:2.40.30.10 272 354 1.2E-6 T 23-04-2016 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 SUPERFAMILY SSF46785 440 512 2.29E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 PRINTS PR00315 GTP-binding elongation factor signature 110 119 5.3E-7 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 PRINTS PR00315 GTP-binding elongation factor signature 5 18 5.3E-7 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 PRINTS PR00315 GTP-binding elongation factor signature 57 67 5.3E-7 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 PRINTS PR00315 GTP-binding elongation factor signature 73 84 5.3E-7 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS14800 ffc2899de86a09edea8c4aa0e63c0e0a 635 SUPERFAMILY SSF50465 266 364 1.15E-29 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLI_RS15405 f06d79b26ae209376d7832827482b837 238 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 56 227 7.3E-54 T 23-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 CLI_RS15405 f06d79b26ae209376d7832827482b837 238 PANTHER PTHR34136 1 238 8.5E-95 T 23-04-2016 CLI_RS15405 f06d79b26ae209376d7832827482b837 238 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 57 220 2.7E-58 T 23-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 CLI_RS15405 f06d79b26ae209376d7832827482b837 238 PANTHER PTHR34136:SF1 1 238 8.5E-95 T 23-04-2016 CLI_RS13490 b0227e0c6d9c9b69bc09b04f3a1dd708 272 PANTHER PTHR30244 1 272 3.2E-156 T 23-04-2016 CLI_RS13490 b0227e0c6d9c9b69bc09b04f3a1dd708 272 Pfam PF00700 Bacterial flagellin C-terminal helical region 183 262 2.4E-7 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS13490 b0227e0c6d9c9b69bc09b04f3a1dd708 272 PANTHER PTHR30244:SF17 1 272 3.2E-156 T 23-04-2016 CLI_RS13490 b0227e0c6d9c9b69bc09b04f3a1dd708 272 Pfam PF00669 Bacterial flagellin N-terminal helical region 14 137 8.6E-33 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS13490 b0227e0c6d9c9b69bc09b04f3a1dd708 272 PRINTS PR00207 Flagellin signature 73 92 5.0E-16 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLI_RS13490 b0227e0c6d9c9b69bc09b04f3a1dd708 272 PRINTS PR00207 Flagellin signature 108 131 5.0E-16 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLI_RS13490 b0227e0c6d9c9b69bc09b04f3a1dd708 272 PRINTS PR00207 Flagellin signature 34 51 5.0E-16 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLI_RS13490 b0227e0c6d9c9b69bc09b04f3a1dd708 272 SUPERFAMILY SSF64518 3 261 1.57E-56 T 23-04-2016 CLI_RS13490 b0227e0c6d9c9b69bc09b04f3a1dd708 272 Gene3D G3DSA:1.20.1330.10 52 223 1.6E-43 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 SMART SM00387 305 415 7.1E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 PANTHER PTHR24423 128 413 3.2E-48 T 23-04-2016 CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 PANTHER PTHR24423 18 47 3.2E-48 T 23-04-2016 CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 SUPERFAMILY SSF55874 251 413 5.63E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 Pfam PF00512 His Kinase A (phospho-acceptor) domain 197 260 8.0E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 411 7.3E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 Gene3D G3DSA:1.10.287.130 186 247 2.1E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 SUPERFAMILY SSF47384 182 260 1.43E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 Gene3D G3DSA:3.30.565.10 248 413 5.2E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 SMART SM00388 194 260 5.0E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 414 2.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 395 2.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 370 2.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS06790 abb426f3cf17490d169fcfc3bbe957ae 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 2.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS18720 825063406fbfc258a40522a5dc98bd88 147 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 145 9.2E-27 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal CLI_RS18720 825063406fbfc258a40522a5dc98bd88 147 Gene3D G3DSA:3.40.5.10 1 52 3.2E-23 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal CLI_RS18720 825063406fbfc258a40522a5dc98bd88 147 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 1.1E-42 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18720 825063406fbfc258a40522a5dc98bd88 147 Gene3D G3DSA:3.10.430.100 61 147 1.1E-28 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal CLI_RS18720 825063406fbfc258a40522a5dc98bd88 147 SUPERFAMILY SSF55658 1 56 1.5E-18 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CLI_RS18720 825063406fbfc258a40522a5dc98bd88 147 PANTHER PTHR21368 1 147 2.1E-47 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18720 825063406fbfc258a40522a5dc98bd88 147 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal CLI_RS18720 825063406fbfc258a40522a5dc98bd88 147 SUPERFAMILY SSF55653 57 146 3.66E-24 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal CLI_RS18720 825063406fbfc258a40522a5dc98bd88 147 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 26.293 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18720 825063406fbfc258a40522a5dc98bd88 147 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 4.9E-24 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal CLI_RS12890 ed3874e731e62c323aa7a7ad82bdccb2 455 PANTHER PTHR30330:SF4 1 441 0.0 T 23-04-2016 CLI_RS12890 ed3874e731e62c323aa7a7ad82bdccb2 455 PANTHER PTHR30330 1 441 0.0 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12890 ed3874e731e62c323aa7a7ad82bdccb2 455 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 89 104 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12890 ed3874e731e62c323aa7a7ad82bdccb2 455 Pfam PF01235 Sodium:alanine symporter family 53 441 4.7E-141 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12890 ed3874e731e62c323aa7a7ad82bdccb2 455 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 437 8.9E-149 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12890 ed3874e731e62c323aa7a7ad82bdccb2 455 PRINTS PR00175 Sodium/alanine symporter signature 180 198 1.1E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12890 ed3874e731e62c323aa7a7ad82bdccb2 455 PRINTS PR00175 Sodium/alanine symporter signature 406 426 1.1E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12890 ed3874e731e62c323aa7a7ad82bdccb2 455 PRINTS PR00175 Sodium/alanine symporter signature 208 227 1.1E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12890 ed3874e731e62c323aa7a7ad82bdccb2 455 PRINTS PR00175 Sodium/alanine symporter signature 347 369 1.1E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12890 ed3874e731e62c323aa7a7ad82bdccb2 455 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.1E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS12890 ed3874e731e62c323aa7a7ad82bdccb2 455 PRINTS PR00175 Sodium/alanine symporter signature 89 111 1.1E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS13165 962ae79c5a0256ae6b4f3f56cef089ee 653 PANTHER PTHR11629 216 392 1.0E-30 T 23-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 CLI_RS13165 962ae79c5a0256ae6b4f3f56cef089ee 653 Pfam PF01496 V-type ATPase 116kDa subunit family 194 429 9.2E-19 T 23-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 CLI_RS13165 962ae79c5a0256ae6b4f3f56cef089ee 653 Pfam PF01496 V-type ATPase 116kDa subunit family 555 642 3.7E-9 T 23-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 CLI_RS11145 ccf83409434bf5948d26053e8e28b2d0 261 PANTHER PTHR30433:SF3 2 260 2.4E-136 T 23-04-2016 IPR022522 Flagellar motor stator, MotA CLI_RS11145 ccf83409434bf5948d26053e8e28b2d0 261 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 186 203 - T 23-04-2016 IPR000540 Flagellar motor protein MotA, conserved site CLI_RS11145 ccf83409434bf5948d26053e8e28b2d0 261 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 219 3.3E-25 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CLI_RS11145 ccf83409434bf5948d26053e8e28b2d0 261 PANTHER PTHR30433 2 260 2.4E-136 T 23-04-2016 CLI_RS10395 aeba3461c7fafea278a0a1af295511a9 393 PANTHER PTHR11926 1 371 2.0E-86 T 23-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 CLI_RS10395 aeba3461c7fafea278a0a1af295511a9 393 PANTHER PTHR11926:SF16 1 371 2.0E-86 T 23-04-2016 CLI_RS10395 aeba3461c7fafea278a0a1af295511a9 393 Gene3D G3DSA:3.40.50.2000 3 228 4.5E-16 T 23-04-2016 CLI_RS10395 aeba3461c7fafea278a0a1af295511a9 393 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 7 387 2.0E-98 T 23-04-2016 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 CLI_RS10395 aeba3461c7fafea278a0a1af295511a9 393 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 226 368 1.2E-16 T 23-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 CLI_RS10395 aeba3461c7fafea278a0a1af295511a9 393 SUPERFAMILY SSF53756 1 387 1.46E-73 T 23-04-2016 CLI_RS10395 aeba3461c7fafea278a0a1af295511a9 393 Gene3D G3DSA:3.40.50.2000 229 369 2.2E-32 T 23-04-2016 CLI_RS07715 7e57c54b32be9f7d2a80e336ea7acb91 229 Gene3D G3DSA:1.10.3720.10 21 228 2.0E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07715 7e57c54b32be9f7d2a80e336ea7acb91 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 226 1.5E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07715 7e57c54b32be9f7d2a80e336ea7acb91 229 PANTHER PTHR30450:SF1 5 229 1.5E-103 T 23-04-2016 CLI_RS07715 7e57c54b32be9f7d2a80e336ea7acb91 229 SUPERFAMILY SSF161098 22 214 1.44E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07715 7e57c54b32be9f7d2a80e336ea7acb91 229 PANTHER PTHR30450 5 229 1.5E-103 T 23-04-2016 CLI_RS04670 3bb121e28e564512cd8e1872612cbdb3 227 PANTHER PTHR24220 5 223 2.2E-95 T 23-04-2016 CLI_RS04670 3bb121e28e564512cd8e1872612cbdb3 227 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS04670 3bb121e28e564512cd8e1872612cbdb3 227 SMART SM00382 32 218 2.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS04670 3bb121e28e564512cd8e1872612cbdb3 227 PANTHER PTHR24220:SF86 5 223 2.2E-95 T 23-04-2016 CLI_RS04670 3bb121e28e564512cd8e1872612cbdb3 227 SUPERFAMILY SSF52540 3 221 4.15E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04670 3bb121e28e564512cd8e1872612cbdb3 227 Pfam PF00005 ABC transporter 23 169 2.1E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS04670 3bb121e28e564512cd8e1872612cbdb3 227 Gene3D G3DSA:3.40.50.300 3 222 1.2E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13915 d68b4b98637a770a3eed940315f5d838 39 Gene3D G3DSA:3.40.50.880 2 30 1.9E-4 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS13020 cda87c8b8b5ee2eb683ada2ecbc0f2db 407 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 119 261 5.2E-6 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CLI_RS13020 cda87c8b8b5ee2eb683ada2ecbc0f2db 407 SUPERFAMILY SSF51735 119 261 6.77E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS13020 cda87c8b8b5ee2eb683ada2ecbc0f2db 407 Gene3D G3DSA:3.40.50.720 115 266 6.2E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16865 87039f98929685912d211cffe125bc84 484 PANTHER PTHR11911:SF6 298 481 8.9E-255 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CLI_RS16865 87039f98929685912d211cffe125bc84 484 PANTHER PTHR11911:SF6 4 280 8.9E-255 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CLI_RS16865 87039f98929685912d211cffe125bc84 484 SMART SM00116 156 204 7.9E-9 T 23-04-2016 IPR000644 CBS domain CLI_RS16865 87039f98929685912d211cffe125bc84 484 SMART SM00116 96 143 1.1E-9 T 23-04-2016 IPR000644 CBS domain CLI_RS16865 87039f98929685912d211cffe125bc84 484 Gene3D G3DSA:3.20.20.70 3 481 8.6E-207 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS16865 87039f98929685912d211cffe125bc84 484 PANTHER PTHR11911 298 481 8.9E-255 T 23-04-2016 CLI_RS16865 87039f98929685912d211cffe125bc84 484 PANTHER PTHR11911 4 280 8.9E-255 T 23-04-2016 CLI_RS16865 87039f98929685912d211cffe125bc84 484 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 469 6.1E-165 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 CLI_RS16865 87039f98929685912d211cffe125bc84 484 PIRSF PIRSF000130 1 484 8.3E-213 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CLI_RS16865 87039f98929685912d211cffe125bc84 484 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 449 3.6E-199 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CLI_RS16865 87039f98929685912d211cffe125bc84 484 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 482 85.188 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CLI_RS16865 87039f98929685912d211cffe125bc84 484 SUPERFAMILY SSF51412 2 90 2.09E-129 T 23-04-2016 CLI_RS16865 87039f98929685912d211cffe125bc84 484 SUPERFAMILY SSF51412 215 473 2.09E-129 T 23-04-2016 CLI_RS16865 87039f98929685912d211cffe125bc84 484 SMART SM01240 7 469 0.0 T 23-04-2016 CLI_RS16865 87039f98929685912d211cffe125bc84 484 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 CLI_RS16865 87039f98929685912d211cffe125bc84 484 SUPERFAMILY SSF54631 85 202 1.01E-29 T 23-04-2016 CLI_RS16865 87039f98929685912d211cffe125bc84 484 Pfam PF00571 CBS domain 96 139 3.4E-10 T 23-04-2016 IPR000644 CBS domain CLI_RS16865 87039f98929685912d211cffe125bc84 484 Pfam PF00571 CBS domain 149 199 1.0E-9 T 23-04-2016 IPR000644 CBS domain CLI_RS10880 6a28c39c00d4587cc556559cd579f911 393 TIGRFAM TIGR01894 cas_TM1795_cmr1: CRISPR type III-B/RAMP module RAMP protein Cmr1 10 146 2.7E-14 T 23-04-2016 IPR007522 CRISPR-associated protein TM1795 CLI_RS12050 24d01fba56f84a513e4b19a5e44d3fd1 320 SUPERFAMILY SSF64182 14 317 4.84E-65 T 23-04-2016 CLI_RS12050 24d01fba56f84a513e4b19a5e44d3fd1 320 Gene3D G3DSA:3.90.1640.10 14 197 5.7E-31 T 23-04-2016 CLI_RS12050 24d01fba56f84a513e4b19a5e44d3fd1 320 PANTHER PTHR13734:SF42 269 319 8.6E-60 T 23-04-2016 CLI_RS12050 24d01fba56f84a513e4b19a5e44d3fd1 320 PANTHER PTHR13734:SF42 1 216 8.6E-60 T 23-04-2016 CLI_RS12050 24d01fba56f84a513e4b19a5e44d3fd1 320 PANTHER PTHR13734 269 319 8.6E-60 T 23-04-2016 CLI_RS12050 24d01fba56f84a513e4b19a5e44d3fd1 320 PANTHER PTHR13734 1 216 8.6E-60 T 23-04-2016 CLI_RS12050 24d01fba56f84a513e4b19a5e44d3fd1 320 Pfam PF02272 DHHA1 domain 255 305 7.4E-9 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 CLI_RS12050 24d01fba56f84a513e4b19a5e44d3fd1 320 Pfam PF01368 DHH family 16 155 1.5E-13 T 23-04-2016 IPR001667 DDH domain CLI_RS10940 ec3c075bc5cc58802c830d65b34950fc 440 PANTHER PTHR11785 2 437 6.8E-90 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS10940 ec3c075bc5cc58802c830d65b34950fc 440 Pfam PF13520 Amino acid permease 7 411 8.3E-49 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS10940 ec3c075bc5cc58802c830d65b34950fc 440 PANTHER PTHR11785:SF261 2 437 6.8E-90 T 23-04-2016 CLI_RS10940 ec3c075bc5cc58802c830d65b34950fc 440 PIRSF PIRSF006060 1 440 5.4E-62 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS07855 b081cf5829c19ba76d38b01f7446fbd2 117 PANTHER PTHR33204:SF8 4 115 6.1E-54 T 23-04-2016 CLI_RS07855 b081cf5829c19ba76d38b01f7446fbd2 117 Gene3D G3DSA:1.10.10.10 9 113 2.0E-46 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07855 b081cf5829c19ba76d38b01f7446fbd2 117 SUPERFAMILY SSF46785 12 111 3.15E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07855 b081cf5829c19ba76d38b01f7446fbd2 117 Pfam PF01638 HxlR-like helix-turn-helix 25 113 4.7E-39 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type CLI_RS07855 b081cf5829c19ba76d38b01f7446fbd2 117 PANTHER PTHR33204 4 115 6.1E-54 T 23-04-2016 CLI_RS14190 11bf90964bf081b23e276b1052adba33 470 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 23-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CLI_RS14190 11bf90964bf081b23e276b1052adba33 470 PANTHER PTHR10353 9 470 4.5E-177 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS14190 11bf90964bf081b23e276b1052adba33 470 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 366 374 - T 23-04-2016 IPR018120 Glycoside hydrolase family 1, active site CLI_RS14190 11bf90964bf081b23e276b1052adba33 470 PANTHER PTHR10353:SF60 9 470 4.5E-177 T 23-04-2016 CLI_RS14190 11bf90964bf081b23e276b1052adba33 470 Gene3D G3DSA:3.20.20.80 8 467 6.3E-153 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS14190 11bf90964bf081b23e276b1052adba33 470 SUPERFAMILY SSF51445 7 467 4.81E-161 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS14190 11bf90964bf081b23e276b1052adba33 470 Pfam PF00232 Glycosyl hydrolase family 1 8 467 3.5E-151 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS14190 11bf90964bf081b23e276b1052adba33 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 1.9E-16 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS14190 11bf90964bf081b23e276b1052adba33 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 408 425 1.9E-16 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS14190 11bf90964bf081b23e276b1052adba33 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 432 444 1.9E-16 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS14190 11bf90964bf081b23e276b1052adba33 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 387 398 1.9E-16 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS14190 11bf90964bf081b23e276b1052adba33 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 366 374 1.9E-16 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS04620 ca61e4616c408afd606b2ff4cc2da327 172 Gene3D G3DSA:3.40.109.10 2 172 1.6E-48 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS04620 ca61e4616c408afd606b2ff4cc2da327 172 PANTHER PTHR23026 1 172 2.2E-111 T 23-04-2016 CLI_RS04620 ca61e4616c408afd606b2ff4cc2da327 172 Pfam PF00881 Nitroreductase family 67 146 1.8E-11 T 23-04-2016 IPR029479 Nitroreductase CLI_RS04620 ca61e4616c408afd606b2ff4cc2da327 172 Pfam PF00881 Nitroreductase family 8 59 5.8E-12 T 23-04-2016 IPR029479 Nitroreductase CLI_RS04620 ca61e4616c408afd606b2ff4cc2da327 172 PANTHER PTHR23026:SF106 1 172 2.2E-111 T 23-04-2016 CLI_RS04620 ca61e4616c408afd606b2ff4cc2da327 172 SUPERFAMILY SSF55469 2 172 7.07E-48 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS14885 92281e53abf7aeb232f82c2e810354b2 616 Gene3D G3DSA:3.80.30.20 255 487 4.4E-44 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS14885 92281e53abf7aeb232f82c2e810354b2 616 PANTHER PTHR11918:SF77 81 192 1.1E-246 T 23-04-2016 CLI_RS14885 92281e53abf7aeb232f82c2e810354b2 616 PANTHER PTHR11918:SF77 222 428 1.1E-246 T 23-04-2016 CLI_RS14885 92281e53abf7aeb232f82c2e810354b2 616 PANTHER PTHR11918:SF77 447 602 1.1E-246 T 23-04-2016 CLI_RS14885 92281e53abf7aeb232f82c2e810354b2 616 SUPERFAMILY SSF102114 222 601 5.49E-48 T 23-04-2016 CLI_RS14885 92281e53abf7aeb232f82c2e810354b2 616 Pfam PF04055 Radical SAM superfamily 261 423 1.4E-18 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS14885 92281e53abf7aeb232f82c2e810354b2 616 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 6 609 0.0 T 23-04-2016 IPR023862 Conserved hypothetical protein CHP03960, radical SAM CLI_RS14885 92281e53abf7aeb232f82c2e810354b2 616 PANTHER PTHR11918 81 192 1.1E-246 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS14885 92281e53abf7aeb232f82c2e810354b2 616 PANTHER PTHR11918 222 428 1.1E-246 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS14885 92281e53abf7aeb232f82c2e810354b2 616 PANTHER PTHR11918 447 602 1.1E-246 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS14885 92281e53abf7aeb232f82c2e810354b2 616 SMART SM00729 256 478 7.3E-34 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS03905 c9666de15b63c5e90f4dcd82f5dc3e23 150 SUPERFAMILY SSF63411 1 146 5.86E-62 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLI_RS03905 c9666de15b63c5e90f4dcd82f5dc3e23 150 PIRSF PIRSF006160 1 150 3.6E-65 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLI_RS03905 c9666de15b63c5e90f4dcd82f5dc3e23 150 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 145 7.0E-49 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLI_RS03905 c9666de15b63c5e90f4dcd82f5dc3e23 150 PANTHER PTHR35799 2 150 1.8E-96 T 23-04-2016 CLI_RS03905 c9666de15b63c5e90f4dcd82f5dc3e23 150 Gene3D G3DSA:3.30.1360.80 1 147 8.0E-65 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLI_RS03905 c9666de15b63c5e90f4dcd82f5dc3e23 150 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 148 35.514 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLI_RS03905 c9666de15b63c5e90f4dcd82f5dc3e23 150 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 3 146 4.6E-57 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLI_RS03905 c9666de15b63c5e90f4dcd82f5dc3e23 150 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 5.2E-40 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLI_RS03905 c9666de15b63c5e90f4dcd82f5dc3e23 150 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 114 133 5.2E-40 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLI_RS03905 c9666de15b63c5e90f4dcd82f5dc3e23 150 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 73 91 5.2E-40 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLI_RS03905 c9666de15b63c5e90f4dcd82f5dc3e23 150 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 5.2E-40 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLI_RS03905 c9666de15b63c5e90f4dcd82f5dc3e23 150 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 5.2E-40 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLI_RS11310 dd6660a5b32abaf484362d08ab0fa5f1 318 PIRSF PIRSF001619 1 318 6.0E-110 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CLI_RS11310 dd6660a5b32abaf484362d08ab0fa5f1 318 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 228 317 3.7E-15 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CLI_RS11310 dd6660a5b32abaf484362d08ab0fa5f1 318 PANTHER PTHR22976:SF1 1 318 4.3E-141 T 23-04-2016 CLI_RS11310 dd6660a5b32abaf484362d08ab0fa5f1 318 Hamap MF_01694 Biotin synthase [bioB]. 15 318 40.997 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CLI_RS11310 dd6660a5b32abaf484362d08ab0fa5f1 318 SMART SM00876 228 318 4.1E-31 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CLI_RS11310 dd6660a5b32abaf484362d08ab0fa5f1 318 TIGRFAM TIGR00433 bioB: biotin synthase 24 317 1.3E-120 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CLI_RS11310 dd6660a5b32abaf484362d08ab0fa5f1 318 SMART SM00729 52 257 6.2E-34 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS11310 dd6660a5b32abaf484362d08ab0fa5f1 318 PANTHER PTHR22976 1 318 4.3E-141 T 23-04-2016 CLI_RS11310 dd6660a5b32abaf484362d08ab0fa5f1 318 Gene3D G3DSA:3.20.20.70 17 317 6.5E-85 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS11310 dd6660a5b32abaf484362d08ab0fa5f1 318 Pfam PF04055 Radical SAM superfamily 61 216 1.3E-17 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS11310 dd6660a5b32abaf484362d08ab0fa5f1 318 SUPERFAMILY SSF102114 18 317 2.88E-68 T 23-04-2016 CLI_RS17250 b2f92b13f1c0b18a78b894dba16811e6 281 Pfam PF00248 Aldo/keto reductase family 16 267 7.8E-48 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS17250 b2f92b13f1c0b18a78b894dba16811e6 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 131 148 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CLI_RS17250 b2f92b13f1c0b18a78b894dba16811e6 281 SUPERFAMILY SSF51430 6 266 1.7E-91 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS17250 b2f92b13f1c0b18a78b894dba16811e6 281 PRINTS PR00069 Aldo-keto reductase signature 131 148 5.9E-54 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS17250 b2f92b13f1c0b18a78b894dba16811e6 281 PRINTS PR00069 Aldo-keto reductase signature 37 61 5.9E-54 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS17250 b2f92b13f1c0b18a78b894dba16811e6 281 PRINTS PR00069 Aldo-keto reductase signature 93 111 5.9E-54 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS17250 b2f92b13f1c0b18a78b894dba16811e6 281 PRINTS PR00069 Aldo-keto reductase signature 202 226 5.9E-54 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS17250 b2f92b13f1c0b18a78b894dba16811e6 281 PRINTS PR00069 Aldo-keto reductase signature 165 194 5.9E-54 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS17250 b2f92b13f1c0b18a78b894dba16811e6 281 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CLI_RS17250 b2f92b13f1c0b18a78b894dba16811e6 281 Gene3D G3DSA:3.20.20.100 5 267 8.3E-105 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS17250 b2f92b13f1c0b18a78b894dba16811e6 281 PANTHER PTHR11732 2 266 1.4E-136 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta CLI_RS17250 b2f92b13f1c0b18a78b894dba16811e6 281 PIRSF PIRSF000097 1 272 1.4E-90 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLI_RS00765 f3e618659fda888134baa5a23c90d369 392 PANTHER PTHR35789 1 47 5.6E-120 T 23-04-2016 CLI_RS00765 f3e618659fda888134baa5a23c90d369 392 PANTHER PTHR35789 65 392 5.6E-120 T 23-04-2016 CLI_RS00765 f3e618659fda888134baa5a23c90d369 392 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 228 389 9.4E-32 T 23-04-2016 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLI_RS00765 f3e618659fda888134baa5a23c90d369 392 PANTHER PTHR35789:SF1 1 47 5.6E-120 T 23-04-2016 CLI_RS00765 f3e618659fda888134baa5a23c90d369 392 PANTHER PTHR35789:SF1 65 392 5.6E-120 T 23-04-2016 CLI_RS00765 f3e618659fda888134baa5a23c90d369 392 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 4 391 2.9E-106 T 23-04-2016 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLI_RS15875 f7486718ec691f1ff9d3d783ab34258a 66 Pfam PF01381 Helix-turn-helix 7 61 1.1E-8 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS15875 f7486718ec691f1ff9d3d783ab34258a 66 SUPERFAMILY SSF47413 3 64 1.13E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS15875 f7486718ec691f1ff9d3d783ab34258a 66 Gene3D G3DSA:1.10.260.40 3 64 1.3E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS15875 f7486718ec691f1ff9d3d783ab34258a 66 SMART SM00530 6 62 4.0E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS00345 4435813c6128f8fc2c2f675e7eb2e077 247 Pfam PF13616 PPIC-type PPIASE domain 107 202 1.1E-22 T 23-04-2016 CLI_RS00345 4435813c6128f8fc2c2f675e7eb2e077 247 Gene3D G3DSA:3.10.50.40 106 228 3.3E-42 T 23-04-2016 CLI_RS00345 4435813c6128f8fc2c2f675e7eb2e077 247 PANTHER PTHR10657 1 246 6.2E-57 T 23-04-2016 CLI_RS00345 4435813c6128f8fc2c2f675e7eb2e077 247 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 142 162 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CLI_RS00345 4435813c6128f8fc2c2f675e7eb2e077 247 SUPERFAMILY SSF54534 102 201 1.57E-29 T 23-04-2016 CLI_RS00345 4435813c6128f8fc2c2f675e7eb2e077 247 SUPERFAMILY SSF109998 3 142 6.28E-21 T 23-04-2016 IPR027304 Trigger factor/SurA domain CLI_RS11935 e7518e4ec009784306e7d2013545841c 516 Pfam PF00239 Resolvase, N terminal domain 5 150 5.3E-37 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS11935 e7518e4ec009784306e7d2013545841c 516 PANTHER PTHR30461:SF3 3 222 5.9E-53 T 23-04-2016 CLI_RS11935 e7518e4ec009784306e7d2013545841c 516 PANTHER PTHR30461:SF3 247 499 5.9E-53 T 23-04-2016 CLI_RS11935 e7518e4ec009784306e7d2013545841c 516 SMART SM00857 4 151 4.2E-52 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS11935 e7518e4ec009784306e7d2013545841c 516 Gene3D G3DSA:3.40.50.1390 3 133 4.1E-31 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS11935 e7518e4ec009784306e7d2013545841c 516 Pfam PF13408 Recombinase zinc beta ribbon domain 309 366 1.3E-8 T 23-04-2016 IPR025827 Recombinase zinc beta ribbon domain CLI_RS11935 e7518e4ec009784306e7d2013545841c 516 PANTHER PTHR30461 3 222 5.9E-53 T 23-04-2016 CLI_RS11935 e7518e4ec009784306e7d2013545841c 516 PANTHER PTHR30461 247 499 5.9E-53 T 23-04-2016 CLI_RS11935 e7518e4ec009784306e7d2013545841c 516 Pfam PF07508 Recombinase 181 295 2.2E-8 T 23-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CLI_RS11935 e7518e4ec009784306e7d2013545841c 516 SUPERFAMILY SSF53041 3 151 1.57E-36 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 PANTHER PTHR21262 1 723 0.0 T 23-04-2016 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 SMART SM00471 39 151 2.0E-10 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 SUPERFAMILY SSF55021 648 721 5.5E-6 T 23-04-2016 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 SMART SM00954 233 343 1.7E-64 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 Gene3D G3DSA:3.30.460.10 176 323 8.8E-49 T 23-04-2016 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 SUPERFAMILY SSF81301 178 389 5.89E-67 T 23-04-2016 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 PANTHER PTHR21262:SF0 1 723 0.0 T 23-04-2016 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 Pfam PF13291 ACT domain 643 720 1.5E-18 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 Pfam PF02824 TGS domain 385 444 4.6E-23 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 SUPERFAMILY SSF81271 372 444 1.28E-24 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 Gene3D G3DSA:3.30.70.260 648 718 6.2E-10 T 23-04-2016 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 Pfam PF13328 HD domain 24 173 2.0E-52 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 Pfam PF04607 Region found in RelA / SpoT proteins 233 342 9.0E-37 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 Gene3D G3DSA:3.10.20.30 384 445 2.5E-24 T 23-04-2016 IPR012675 Beta-grasp domain CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 24 720 1.4E-250 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 CLI_RS15240 13f81b6092864e5dfae5f77b08c4ed4b 723 SUPERFAMILY SSF109604 3 188 3.14E-75 T 23-04-2016 CLI_RS07090 700a13833f47c57f01ba4670a7d85d21 270 Pfam PF00005 ABC transporter 29 179 5.9E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS07090 700a13833f47c57f01ba4670a7d85d21 270 PANTHER PTHR24220 3 265 4.2E-118 T 23-04-2016 CLI_RS07090 700a13833f47c57f01ba4670a7d85d21 270 SUPERFAMILY SSF52540 1 237 1.7E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07090 700a13833f47c57f01ba4670a7d85d21 270 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07090 700a13833f47c57f01ba4670a7d85d21 270 PANTHER PTHR24220:SF81 3 265 4.2E-118 T 23-04-2016 CLI_RS07090 700a13833f47c57f01ba4670a7d85d21 270 SMART SM00382 37 230 4.6E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS07090 700a13833f47c57f01ba4670a7d85d21 270 Gene3D G3DSA:3.40.50.300 1 254 1.4E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00500 83c86ce00df8d5158fd857a980cb3a98 190 PANTHER PTHR33693 3 189 3.0E-79 T 23-04-2016 CLI_RS00500 83c86ce00df8d5158fd857a980cb3a98 190 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 14 180 1.6E-58 T 23-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain CLI_RS00500 83c86ce00df8d5158fd857a980cb3a98 190 SMART SM00986 28 175 5.6E-37 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CLI_RS00500 83c86ce00df8d5158fd857a980cb3a98 190 Gene3D G3DSA:3.40.470.10 3 184 1.2E-68 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CLI_RS00500 83c86ce00df8d5158fd857a980cb3a98 190 SUPERFAMILY SSF52141 4 183 3.04E-61 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CLI_RS00500 83c86ce00df8d5158fd857a980cb3a98 190 PANTHER PTHR33693:SF1 3 189 3.0E-79 T 23-04-2016 CLI_RS00500 83c86ce00df8d5158fd857a980cb3a98 190 Pfam PF03167 Uracil DNA glycosylase superfamily 28 175 2.2E-44 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CLI_RS00500 83c86ce00df8d5158fd857a980cb3a98 190 SMART SM00987 28 175 5.6E-37 T 23-04-2016 CLI_RS18300 ced1572ddd58bebb9f3307503a587117 196 SUPERFAMILY SSF56784 9 194 6.87E-31 T 23-04-2016 IPR023214 HAD-like domain CLI_RS18300 ced1572ddd58bebb9f3307503a587117 196 Pfam PF13419 Haloacid dehalogenase-like hydrolase 30 168 1.5E-21 T 23-04-2016 IPR023214 HAD-like domain CLI_RS18300 ced1572ddd58bebb9f3307503a587117 196 Gene3D G3DSA:3.40.50.1000 47 195 1.8E-33 T 23-04-2016 IPR023214 HAD-like domain CLI_RS18300 ced1572ddd58bebb9f3307503a587117 196 PANTHER PTHR18901 1 195 1.5E-69 T 23-04-2016 CLI_RS18300 ced1572ddd58bebb9f3307503a587117 196 PANTHER PTHR18901:SF44 1 195 1.5E-69 T 23-04-2016 CLI_RS18300 ced1572ddd58bebb9f3307503a587117 196 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 42 168 4.2E-13 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS11090 dcf5ac51fcf3eb7b412faf5dbd55ce0a 820 Pfam PF16216 GxGYxY sequence motif in domain of unknown function N-terminal 347 559 2.8E-74 T 23-04-2016 IPR032626 GxGYxYP putative glycoside hydrolase, N-terminal CLI_RS11090 dcf5ac51fcf3eb7b412faf5dbd55ce0a 820 PANTHER PTHR37321 226 818 7.4E-117 T 23-04-2016 CLI_RS11090 dcf5ac51fcf3eb7b412faf5dbd55ce0a 820 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 219 229 - T 23-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 CLI_RS11090 dcf5ac51fcf3eb7b412faf5dbd55ce0a 820 PANTHER PTHR37321:SF1 226 818 7.4E-117 T 23-04-2016 CLI_RS11090 dcf5ac51fcf3eb7b412faf5dbd55ce0a 820 SMART SM01301 106 239 1.3E-54 T 23-04-2016 CLI_RS11090 dcf5ac51fcf3eb7b412faf5dbd55ce0a 820 Gene3D G3DSA:3.90.190.10 173 299 1.8E-46 T 23-04-2016 IPR029021 Protein-tyrosine phosphatase-like CLI_RS11090 dcf5ac51fcf3eb7b412faf5dbd55ce0a 820 Gene3D G3DSA:3.90.190.10 67 123 1.8E-46 T 23-04-2016 IPR029021 Protein-tyrosine phosphatase-like CLI_RS11090 dcf5ac51fcf3eb7b412faf5dbd55ce0a 820 Pfam PF14566 Inositol hexakisphosphate 106 239 1.4E-26 T 23-04-2016 CLI_RS11090 dcf5ac51fcf3eb7b412faf5dbd55ce0a 820 Pfam PF14323 GxGYxYP putative glycoside hydrolase C-terminal domain 578 814 2.2E-83 T 23-04-2016 IPR025832 GxGYxYP putative glycoside hydrolase, C-terminal CLI_RS11090 dcf5ac51fcf3eb7b412faf5dbd55ce0a 820 ProDom PD069361 HYDROLASE VIRULENCE PLASMID AVRBS1.1 HEXAPHOSPHATE TYROSINE PHOSPHOHYDROLASE PRECURSOR MYO-INOSITOL AVIRULENCE 214 297 4.0E-12 T 23-04-2016 CLI_RS11090 dcf5ac51fcf3eb7b412faf5dbd55ce0a 820 SUPERFAMILY SSF52799 27 303 9.2E-36 T 23-04-2016 IPR029021 Protein-tyrosine phosphatase-like CLI_RS06080 999d6f41ecf60a7fa205bc975532e48e 210 PANTHER PTHR12234:SF2 1 165 1.7E-79 T 23-04-2016 CLI_RS06080 999d6f41ecf60a7fa205bc975532e48e 210 Pfam PF04961 Formiminotransferase-cyclodeaminase 5 185 1.6E-63 T 23-04-2016 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00379 CLI_RS06080 999d6f41ecf60a7fa205bc975532e48e 210 PANTHER PTHR12234 1 165 1.7E-79 T 23-04-2016 CLI_RS06080 999d6f41ecf60a7fa205bc975532e48e 210 SUPERFAMILY SSF101262 2 206 1.7E-58 T 23-04-2016 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00379 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 SMART SM00388 257 323 7.3E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 Gene3D G3DSA:3.30.565.10 329 475 1.3E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 SMART SM00387 368 479 2.3E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 SUPERFAMILY SSF47384 243 323 1.02E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 SMART SM00304 183 235 3.5E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 SUPERFAMILY SSF158472 184 231 3.53E-8 T 23-04-2016 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 SUPERFAMILY SSF55874 314 476 1.14E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 1.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 1.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 1.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 1.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 PANTHER PTHR24423 253 475 1.2E-65 T 23-04-2016 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 PANTHER PTHR24423 68 129 1.2E-65 T 23-04-2016 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 PANTHER PTHR24423 177 231 1.2E-65 T 23-04-2016 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 Gene3D G3DSA:1.10.287.130 249 319 1.8E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 Pfam PF00672 HAMP domain 165 231 6.9E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 322 4.4E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS09960 cbf7727d1878f625706fc781438c2592 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 477 4.2E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13160 c84b0a6154fa1b8ccca3ee9ae3fed24e 158 SUPERFAMILY SSF81333 90 157 6.8E-11 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLI_RS13160 c84b0a6154fa1b8ccca3ee9ae3fed24e 158 SUPERFAMILY SSF81333 18 80 1.16E-9 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLI_RS13160 c84b0a6154fa1b8ccca3ee9ae3fed24e 158 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 135 158 3.2E-7 T 23-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 CLI_RS13160 c84b0a6154fa1b8ccca3ee9ae3fed24e 158 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 34 58 3.2E-7 T 23-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 CLI_RS13160 c84b0a6154fa1b8ccca3ee9ae3fed24e 158 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 60 84 3.2E-7 T 23-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 CLI_RS13160 c84b0a6154fa1b8ccca3ee9ae3fed24e 158 Pfam PF00137 ATP synthase subunit C 21 79 3.2E-12 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLI_RS13160 c84b0a6154fa1b8ccca3ee9ae3fed24e 158 Pfam PF00137 ATP synthase subunit C 97 156 4.9E-13 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLI_RS13160 c84b0a6154fa1b8ccca3ee9ae3fed24e 158 PANTHER PTHR10263 3 114 2.3E-19 T 23-04-2016 CLI_RS13160 c84b0a6154fa1b8ccca3ee9ae3fed24e 158 Gene3D G3DSA:1.20.120.610 8 157 1.6E-33 T 23-04-2016 CLI_RS07980 4c455570312440b97bfeec0b0fdb923e 331 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 9 325 6.4E-32 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS07980 4c455570312440b97bfeec0b0fdb923e 331 PANTHER PTHR30548:SF3 1 331 2.4E-236 T 23-04-2016 CLI_RS07980 4c455570312440b97bfeec0b0fdb923e 331 PANTHER PTHR30548 1 331 2.4E-236 T 23-04-2016 CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 SUPERFAMILY SSF52540 3 197 5.92E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 PANTHER PTHR19211 266 490 3.7E-101 T 23-04-2016 CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 PANTHER PTHR19211 1 235 3.7E-101 T 23-04-2016 CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 SMART SM00382 30 190 9.5E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 SMART SM00382 334 491 0.039 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 PANTHER PTHR19211:SF45 266 490 3.7E-101 T 23-04-2016 CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 PANTHER PTHR19211:SF45 1 235 3.7E-101 T 23-04-2016 CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 Gene3D G3DSA:3.40.50.300 307 490 2.3E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 SUPERFAMILY SSF52540 297 490 4.76E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 Gene3D G3DSA:3.40.50.300 4 234 1.7E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 ProSitePatterns PS00211 ABC transporters family signature. 423 437 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 Pfam PF00005 ABC transporter 326 451 5.3E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS14220 7fa2e60dfc05371b6fc3c478f4b37677 492 Pfam PF00005 ABC transporter 22 146 2.4E-17 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS12685 e33aebad8b01e9fcb5fb91d458e5b393 265 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 2 265 4.3E-72 T 23-04-2016 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 CLI_RS12685 e33aebad8b01e9fcb5fb91d458e5b393 265 Pfam PF03419 Sporulation factor SpoIIGA 2 263 8.9E-65 T 23-04-2016 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 CLI_RS12685 e33aebad8b01e9fcb5fb91d458e5b393 265 PIRSF PIRSF018571 1 265 1.4E-67 T 23-04-2016 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 CLI_RS14570 9be0efea023db267680210310997181e 720 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 496 700 2.3E-53 T 23-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal CLI_RS14570 9be0efea023db267680210310997181e 720 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 12 171 1.0E-45 T 23-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal CLI_RS14570 9be0efea023db267680210310997181e 720 PANTHER PTHR30294 511 713 2.3E-164 T 23-04-2016 CLI_RS14570 9be0efea023db267680210310997181e 720 PANTHER PTHR30294:SF4 1 233 2.3E-164 T 23-04-2016 CLI_RS14570 9be0efea023db267680210310997181e 720 PANTHER PTHR30294:SF4 511 713 2.3E-164 T 23-04-2016 CLI_RS14570 9be0efea023db267680210310997181e 720 PANTHER PTHR30294 1 233 2.3E-164 T 23-04-2016 CLI_RS14570 9be0efea023db267680210310997181e 720 Pfam PF12698 ABC-2 family transporter protein 378 696 1.9E-12 T 23-04-2016 CLI_RS14570 9be0efea023db267680210310997181e 720 Pfam PF12698 ABC-2 family transporter protein 23 168 1.4E-10 T 23-04-2016 CLI_RS04330 01e1c3fe504b296393c4d5e20346cbd1 520 PANTHER PTHR35788:SF1 3 459 1.4E-188 T 23-04-2016 CLI_RS04330 01e1c3fe504b296393c4d5e20346cbd1 520 Pfam PF07501 G5 domain 391 458 1.3E-12 T 23-04-2016 IPR011098 G5 domain CLI_RS04330 01e1c3fe504b296393c4d5e20346cbd1 520 SMART SM01208 382 459 7.9E-18 T 23-04-2016 IPR011098 G5 domain CLI_RS04330 01e1c3fe504b296393c4d5e20346cbd1 520 PANTHER PTHR35788 3 459 1.4E-188 T 23-04-2016 CLI_RS04330 01e1c3fe504b296393c4d5e20346cbd1 520 Pfam PF04294 VanW like protein 245 374 3.2E-51 T 23-04-2016 IPR007391 Vancomycin resistance VanW CLI_RS04330 01e1c3fe504b296393c4d5e20346cbd1 520 Pfam PF12229 Putative peptidoglycan binding domain 94 206 5.5E-21 T 23-04-2016 IPR022029 Putative peptidoglycan binding domain CLI_RS15140 822b858b1b9c0e6fed22e28de83cb4a6 266 Gene3D G3DSA:3.40.50.300 61 242 9.0E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15140 822b858b1b9c0e6fed22e28de83cb4a6 266 SUPERFAMILY SSF52540 76 236 1.6E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15140 822b858b1b9c0e6fed22e28de83cb4a6 266 PANTHER PTHR30050:SF7 27 257 4.6E-87 T 23-04-2016 CLI_RS15140 822b858b1b9c0e6fed22e28de83cb4a6 266 PANTHER PTHR30050 27 257 4.6E-87 T 23-04-2016 CLI_RS15140 822b858b1b9c0e6fed22e28de83cb4a6 266 Pfam PF01695 IstB-like ATP binding protein 82 225 3.1E-13 T 23-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 CLI_RS15140 822b858b1b9c0e6fed22e28de83cb4a6 266 SMART SM00382 111 237 1.3E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03740 2a441f0c531d4a7c1fff48dd09a84a1e 232 Pfam PF00072 Response regulator receiver domain 4 112 1.2E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS03740 2a441f0c531d4a7c1fff48dd09a84a1e 232 Gene3D G3DSA:3.40.50.2300 3 125 9.7E-35 T 23-04-2016 CLI_RS03740 2a441f0c531d4a7c1fff48dd09a84a1e 232 PANTHER PTHR26402:SF50 2 223 5.3E-71 T 23-04-2016 CLI_RS03740 2a441f0c531d4a7c1fff48dd09a84a1e 232 PANTHER PTHR26402 2 223 5.3E-71 T 23-04-2016 CLI_RS03740 2a441f0c531d4a7c1fff48dd09a84a1e 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 223 1.8E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS03740 2a441f0c531d4a7c1fff48dd09a84a1e 232 Gene3D G3DSA:1.10.10.10 126 225 2.5E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03740 2a441f0c531d4a7c1fff48dd09a84a1e 232 SMART SM00862 147 224 3.1E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS03740 2a441f0c531d4a7c1fff48dd09a84a1e 232 SUPERFAMILY SSF52172 3 118 3.84E-34 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS03740 2a441f0c531d4a7c1fff48dd09a84a1e 232 SMART SM00448 2 112 2.4E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS03740 2a441f0c531d4a7c1fff48dd09a84a1e 232 SUPERFAMILY SSF46894 123 224 3.68E-25 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS04585 2403bdef81c2e0301252da4327fd00c9 310 Pfam PF13280 WYL domain 137 305 1.2E-32 T 23-04-2016 IPR026881 WYL domain CLI_RS04585 2403bdef81c2e0301252da4327fd00c9 310 Pfam PF08279 HTH domain 5 55 1.2E-10 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 CLI_RS04585 2403bdef81c2e0301252da4327fd00c9 310 Gene3D G3DSA:1.10.10.10 4 58 2.4E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04585 2403bdef81c2e0301252da4327fd00c9 310 PIRSF PIRSF016838 1 310 3.0E-19 T 23-04-2016 IPR028349 Protein PafC CLI_RS04585 2403bdef81c2e0301252da4327fd00c9 310 PANTHER PTHR30595 2 302 7.9E-88 T 23-04-2016 CLI_RS04585 2403bdef81c2e0301252da4327fd00c9 310 PANTHER PTHR30595:SF3 2 302 7.9E-88 T 23-04-2016 CLI_RS04585 2403bdef81c2e0301252da4327fd00c9 310 SUPERFAMILY SSF46785 4 58 1.41E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17860 cae8d40f84910e96f578ef896f5430fe 156 Gene3D G3DSA:1.10.455.10 8 156 2.6E-64 T 23-04-2016 IPR023798 Ribosomal protein S7 domain CLI_RS17860 cae8d40f84910e96f578ef896f5430fe 156 SUPERFAMILY SSF47973 7 149 2.22E-60 T 23-04-2016 IPR023798 Ribosomal protein S7 domain CLI_RS17860 cae8d40f84910e96f578ef896f5430fe 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.326 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CLI_RS17860 cae8d40f84910e96f578ef896f5430fe 156 PANTHER PTHR11205 1 156 1.3E-88 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 CLI_RS17860 cae8d40f84910e96f578ef896f5430fe 156 PIRSF PIRSF002122 4 156 2.4E-58 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 CLI_RS17860 cae8d40f84910e96f578ef896f5430fe 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 7.8E-66 T 23-04-2016 IPR023798 Ribosomal protein S7 domain CLI_RS17860 cae8d40f84910e96f578ef896f5430fe 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.9E-68 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CLI_RS17860 cae8d40f84910e96f578ef896f5430fe 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 CLI_RS08765 ac0e9d8458510e6384a10ce44fe6bb81 311 Gene3D G3DSA:1.10.287.890 202 283 2.6E-31 T 23-04-2016 CLI_RS08765 ac0e9d8458510e6384a10ce44fe6bb81 311 Gene3D G3DSA:3.40.50.300 3 172 8.8E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08765 ac0e9d8458510e6384a10ce44fe6bb81 311 PANTHER PTHR11088 4 296 1.1E-116 T 23-04-2016 CLI_RS08765 ac0e9d8458510e6384a10ce44fe6bb81 311 SUPERFAMILY SSF52540 5 75 6.68E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08765 ac0e9d8458510e6384a10ce44fe6bb81 311 SUPERFAMILY SSF52540 253 311 6.68E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08765 ac0e9d8458510e6384a10ce44fe6bb81 311 SUPERFAMILY SSF52540 154 212 6.68E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08765 ac0e9d8458510e6384a10ce44fe6bb81 311 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 302 30.727 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CLI_RS08765 ac0e9d8458510e6384a10ce44fe6bb81 311 Pfam PF01715 IPP transferase 37 285 1.4E-80 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CLI_RS08765 ac0e9d8458510e6384a10ce44fe6bb81 311 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 292 2.7E-102 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CLI_RS08765 ac0e9d8458510e6384a10ce44fe6bb81 311 SUPERFAMILY SSF52540 5 146 1.18E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06740 5f04089d3c24bb9bd3d2503f38104eb2 54 Gene3D G3DSA:3.30.40.10 7 48 8.7E-4 T 23-04-2016 IPR013083 Zinc finger, RING/FYVE/PHD-type CLI_RS06740 5f04089d3c24bb9bd3d2503f38104eb2 54 Pfam PF13451 Probable zinc-ribbon domain 3 48 3.5E-26 T 23-04-2016 IPR025306 Probable zinc-binding domain CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 SMART SM00028 155 188 170.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 SMART SM00028 237 270 35.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 SMART SM00028 395 428 90.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 SMART SM00028 355 388 140.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 SMART SM00028 197 230 15.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 SMART SM00028 277 310 10.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 SMART SM00028 75 108 58.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 Gene3D G3DSA:1.25.40.10 75 219 2.0E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 SUPERFAMILY SSF47413 4 68 1.1E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 PANTHER PTHR10098 1 428 1.9E-104 T 23-04-2016 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 SUPERFAMILY SSF48452 177 381 7.4E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 SUPERFAMILY SSF48452 71 219 3.21E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 SMART SM00530 9 63 9.0E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 Pfam PF13424 Tetratricopeptide repeat 237 309 1.1E-8 T 23-04-2016 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 Pfam PF12844 Helix-turn-helix domain 7 67 2.8E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 Gene3D G3DSA:1.25.40.10 226 425 6.3E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 PANTHER PTHR10098:SF104 1 428 1.9E-104 T 23-04-2016 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 Gene3D G3DSA:1.10.260.40 6 74 4.5E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS02235 b0ff1ea50250c2bd04245c71528df578 434 Pfam PF13181 Tetratricopeptide repeat 197 219 0.014 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 Gene3D G3DSA:2.70.20.10 210 321 2.5E-19 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 Pfam PF01131 DNA topoisomerase 152 584 1.9E-128 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 Pfam PF01751 Toprim domain 4 133 1.4E-13 T 23-04-2016 IPR006171 Toprim domain CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 PANTHER PTHR11390:SF21 1 495 3.3E-220 T 23-04-2016 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 PANTHER PTHR11390:SF21 514 681 3.3E-220 T 23-04-2016 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 SMART SM00493 3 126 2.3E-15 T 23-04-2016 IPR006171 Toprim domain CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 SMART SM00436 126 216 1.1E-40 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 Gene3D G3DSA:3.40.50.140 3 153 1.5E-48 T 23-04-2016 IPR006171 Toprim domain CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 TIGRFAM TIGR01056 topB: DNA topoisomerase III 4 729 4.6E-247 T 23-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 SMART SM00437 261 551 8.8E-90 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 PANTHER PTHR11390 1 495 3.3E-220 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 PANTHER PTHR11390 514 681 3.3E-220 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 Gene3D G3DSA:2.70.20.10 352 473 3.5E-37 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 304 313 9.3E-28 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 514 528 9.3E-28 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 386 402 9.3E-28 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 9.3E-28 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 9.3E-28 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 298 313 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 Hamap MF_00953 DNA topoisomerase 3 [topB]. 3 640 60.246 T 23-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 Gene3D G3DSA:1.10.460.10 474 600 3.0E-56 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 Gene3D G3DSA:1.10.460.10 155 209 3.0E-56 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLI_RS06680 64b2247fc5bc503982cf0a899aa37f19 731 SUPERFAMILY SSF56712 3 601 1.11E-179 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 Gene3D G3DSA:3.40.630.10 323 407 1.0E-120 T 23-04-2016 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 Gene3D G3DSA:3.40.630.10 1 210 1.0E-120 T 23-04-2016 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 PIRSF PIRSF037215 1 408 1.1E-189 T 23-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 PANTHER PTHR11014 2 91 3.0E-191 T 23-04-2016 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 PANTHER PTHR11014 132 408 3.0E-191 T 23-04-2016 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 PANTHER PTHR11014:SF3 2 91 3.0E-191 T 23-04-2016 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 PANTHER PTHR11014:SF3 132 408 3.0E-191 T 23-04-2016 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 SUPERFAMILY SSF53187 323 407 2.66E-79 T 23-04-2016 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 SUPERFAMILY SSF53187 1 211 2.66E-79 T 23-04-2016 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 407 6.7E-180 T 23-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 Hamap MF_00550 Peptidase T [pepT]. 1 405 59.214 T 23-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 Pfam PF01546 Peptidase family M20/M25/M40 140 402 6.0E-10 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 139 178 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 Pfam PF07687 Peptidase dimerisation domain 208 307 2.0E-10 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 SUPERFAMILY SSF55031 210 321 1.15E-39 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS02445 eca98b4ecc0f41b99c18a76f3bec6e12 408 Gene3D G3DSA:3.30.70.360 211 320 3.0E-46 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 Gene3D G3DSA:3.40.50.300 288 306 7.7E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 Gene3D G3DSA:3.40.50.300 62 249 7.7E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 SMART SM00382 107 260 7.0E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 387 4.1E-16 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 SUPERFAMILY SSF57716 10 45 2.0E-11 T 23-04-2016 CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.207 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 PANTHER PTHR11262 5 408 9.1E-245 T 23-04-2016 CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 Pfam PF07724 AAA domain (Cdc48 subfamily) 107 305 6.2E-50 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 PANTHER PTHR11262:SF4 5 408 9.1E-245 T 23-04-2016 CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 SUPERFAMILY SSF52540 60 397 1.28E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 SMART SM00994 9 48 1.2E-23 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 Pfam PF06689 ClpX C4-type zinc finger 10 47 6.0E-21 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 2 403 4.9E-207 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 Gene3D G3DSA:1.10.8.60 310 410 1.0E-37 T 23-04-2016 CLI_RS16440 f9c9f28f90b3bc5c032bf58645bb709f 429 SMART SM01086 311 404 8.8E-31 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CLI_RS08965 00d87c0ff02a0952808ff35f90a10772 171 PANTHER PTHR10281:SF39 72 147 5.4E-20 T 23-04-2016 CLI_RS08965 00d87c0ff02a0952808ff35f90a10772 171 PANTHER PTHR10281 72 147 5.4E-20 T 23-04-2016 CLI_RS08965 00d87c0ff02a0952808ff35f90a10772 171 SUPERFAMILY SSF55856 93 160 3.93E-14 T 23-04-2016 IPR001199 Cytochrome b5-like heme/steroid binding domain CLI_RS08965 00d87c0ff02a0952808ff35f90a10772 171 Pfam PF00173 Cytochrome b5-like Heme/Steroid binding domain 100 170 9.1E-11 T 23-04-2016 IPR001199 Cytochrome b5-like heme/steroid binding domain CLI_RS08965 00d87c0ff02a0952808ff35f90a10772 171 Gene3D G3DSA:3.10.120.10 96 161 1.3E-14 T 23-04-2016 IPR001199 Cytochrome b5-like heme/steroid binding domain CLI_RS08965 00d87c0ff02a0952808ff35f90a10772 171 SMART SM01117 99 171 1.3E-11 T 23-04-2016 IPR001199 Cytochrome b5-like heme/steroid binding domain CLI_RS08730 892eb0b4959ea65c16a10e135103547a 66 PANTHER PTHR36107 1 66 1.9E-31 T 23-04-2016 CLI_RS08730 892eb0b4959ea65c16a10e135103547a 66 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 22 31 - T 23-04-2016 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLI_RS08730 892eb0b4959ea65c16a10e135103547a 66 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 7 66 7.1E-26 T 23-04-2016 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLI_RS08730 892eb0b4959ea65c16a10e135103547a 66 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 45 59 - T 23-04-2016 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLI_RS04475 ce0c46eefde8817a03f74b7659ec6cdf 115 TIGRFAM TIGR04076 TIGR04076: TIGR04076 family protein 9 101 1.1E-12 T 23-04-2016 IPR023811 Conserved hypothetical protein CHP04076 CLI_RS09465 bfdc2baf9d5bfb58c5e760d046461787 330 Gene3D G3DSA:1.10.443.10 138 315 4.5E-43 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS09465 bfdc2baf9d5bfb58c5e760d046461787 330 SUPERFAMILY SSF56349 8 64 4.12E-56 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLI_RS09465 bfdc2baf9d5bfb58c5e760d046461787 330 SUPERFAMILY SSF56349 91 315 4.12E-56 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLI_RS09465 bfdc2baf9d5bfb58c5e760d046461787 330 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 9 117 1.1E-8 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLI_RS09465 bfdc2baf9d5bfb58c5e760d046461787 330 PANTHER PTHR30349:SF5 8 66 1.9E-54 T 23-04-2016 CLI_RS09465 bfdc2baf9d5bfb58c5e760d046461787 330 PANTHER PTHR30349:SF5 92 329 1.9E-54 T 23-04-2016 CLI_RS09465 bfdc2baf9d5bfb58c5e760d046461787 330 Gene3D G3DSA:1.10.150.130 7 125 1.8E-14 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CLI_RS09465 bfdc2baf9d5bfb58c5e760d046461787 330 PANTHER PTHR30349 8 66 1.9E-54 T 23-04-2016 CLI_RS09465 bfdc2baf9d5bfb58c5e760d046461787 330 PANTHER PTHR30349 92 329 1.9E-54 T 23-04-2016 CLI_RS09465 bfdc2baf9d5bfb58c5e760d046461787 330 Pfam PF00589 Phage integrase family 138 307 6.1E-34 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS17680 3704711e4bcdaf341727236fd0703a86 288 Pfam PF00005 ABC transporter 24 173 8.0E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS17680 3704711e4bcdaf341727236fd0703a86 288 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS17680 3704711e4bcdaf341727236fd0703a86 288 PANTHER PTHR24220:SF66 4 257 7.4E-100 T 23-04-2016 CLI_RS17680 3704711e4bcdaf341727236fd0703a86 288 SUPERFAMILY SSF52540 3 236 2.41E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17680 3704711e4bcdaf341727236fd0703a86 288 SMART SM00382 32 231 2.3E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS17680 3704711e4bcdaf341727236fd0703a86 288 Gene3D G3DSA:3.40.50.300 2 235 2.3E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17680 3704711e4bcdaf341727236fd0703a86 288 PANTHER PTHR24220 4 257 7.4E-100 T 23-04-2016 CLI_RS17680 3704711e4bcdaf341727236fd0703a86 288 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 278 1.6E-123 T 23-04-2016 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 CLI_RS00265 4c591a9c3e4514e412284bc8d06d1374 198 SMART SM00986 28 189 4.9E-24 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CLI_RS00265 4c591a9c3e4514e412284bc8d06d1374 198 SUPERFAMILY SSF52141 10 196 7.52E-42 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CLI_RS00265 4c591a9c3e4514e412284bc8d06d1374 198 PANTHER PTHR33693 5 197 2.4E-52 T 23-04-2016 CLI_RS00265 4c591a9c3e4514e412284bc8d06d1374 198 Gene3D G3DSA:3.40.470.10 6 196 7.2E-43 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CLI_RS00265 4c591a9c3e4514e412284bc8d06d1374 198 Pfam PF03167 Uracil DNA glycosylase superfamily 29 191 4.5E-36 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CLI_RS00265 4c591a9c3e4514e412284bc8d06d1374 198 SMART SM00987 28 189 4.9E-24 T 23-04-2016 CLI_RS00265 4c591a9c3e4514e412284bc8d06d1374 198 PANTHER PTHR33693:SF1 5 197 2.4E-52 T 23-04-2016 CLI_RS09915 32a826e24e89fc0f8a9efb89599fece1 695 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 377 390 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS09915 32a826e24e89fc0f8a9efb89599fece1 695 PANTHER PTHR32071:SF26 300 600 2.8E-143 T 23-04-2016 CLI_RS09915 32a826e24e89fc0f8a9efb89599fece1 695 Pfam PF00158 Sigma-54 interaction domain 353 520 3.9E-66 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLI_RS09915 32a826e24e89fc0f8a9efb89599fece1 695 PANTHER PTHR32071 300 600 2.8E-143 T 23-04-2016 CLI_RS09915 32a826e24e89fc0f8a9efb89599fece1 695 SUPERFAMILY SSF52540 352 590 6.61E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09915 32a826e24e89fc0f8a9efb89599fece1 695 Gene3D G3DSA:1.10.10.10 611 688 2.0E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09915 32a826e24e89fc0f8a9efb89599fece1 695 SMART SM00382 373 517 1.4E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS09915 32a826e24e89fc0f8a9efb89599fece1 695 Gene3D G3DSA:3.40.50.300 349 526 2.9E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09915 32a826e24e89fc0f8a9efb89599fece1 695 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 562 571 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS09915 32a826e24e89fc0f8a9efb89599fece1 695 Gene3D G3DSA:1.10.8.60 527 597 5.7E-17 T 23-04-2016 CLI_RS09915 32a826e24e89fc0f8a9efb89599fece1 695 Gene3D G3DSA:3.30.450.20 216 276 5.8E-4 T 23-04-2016 CLI_RS09915 32a826e24e89fc0f8a9efb89599fece1 695 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 440 455 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS07755 00b571177a48fd0e5d5b9a381e9c6f21 378 SUPERFAMILY SSF46548 290 370 2.14E-11 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS07755 00b571177a48fd0e5d5b9a381e9c6f21 378 PANTHER PTHR11732 1 315 1.6E-201 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta CLI_RS07755 00b571177a48fd0e5d5b9a381e9c6f21 378 Gene3D G3DSA:3.20.20.100 1 296 1.7E-55 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS07755 00b571177a48fd0e5d5b9a381e9c6f21 378 Pfam PF00248 Aldo/keto reductase family 16 284 3.3E-37 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS07755 00b571177a48fd0e5d5b9a381e9c6f21 378 Gene3D G3DSA:3.30.70.20 297 371 3.7E-8 T 23-04-2016 CLI_RS07755 00b571177a48fd0e5d5b9a381e9c6f21 378 SUPERFAMILY SSF51430 1 317 3.27E-66 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS07755 00b571177a48fd0e5d5b9a381e9c6f21 378 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 349 360 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS07755 00b571177a48fd0e5d5b9a381e9c6f21 378 Pfam PF13534 4Fe-4S dicluster domain 298 363 2.6E-10 T 23-04-2016 CLI_RS07755 00b571177a48fd0e5d5b9a381e9c6f21 378 PANTHER PTHR11732:SF5 1 315 1.6E-201 T 23-04-2016 CLI_RS15000 a533f30973eb85d77542b0e3d5bbad66 374 Gene3D G3DSA:3.60.150.10 1 371 6.7E-130 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS15000 a533f30973eb85d77542b0e3d5bbad66 374 TIGRFAM TIGR00033 aroC: chorismate synthase 2 357 3.8E-109 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS15000 a533f30973eb85d77542b0e3d5bbad66 374 SUPERFAMILY SSF103263 1 371 3.53E-121 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS15000 a533f30973eb85d77542b0e3d5bbad66 374 PANTHER PTHR21085:SF0 1 374 1.1E-157 T 23-04-2016 CLI_RS15000 a533f30973eb85d77542b0e3d5bbad66 374 ProSitePatterns PS00788 Chorismate synthase signature 2. 125 141 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS15000 a533f30973eb85d77542b0e3d5bbad66 374 ProSitePatterns PS00789 Chorismate synthase signature 3. 330 346 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS15000 a533f30973eb85d77542b0e3d5bbad66 374 Pfam PF01264 Chorismate synthase 2 356 5.9E-108 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS15000 a533f30973eb85d77542b0e3d5bbad66 374 Hamap MF_00300 Chorismate synthase [aroC]. 2 363 31.743 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS15000 a533f30973eb85d77542b0e3d5bbad66 374 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS15000 a533f30973eb85d77542b0e3d5bbad66 374 PIRSF PIRSF001456 1 373 4.2E-120 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS15000 a533f30973eb85d77542b0e3d5bbad66 374 PANTHER PTHR21085 1 374 1.1E-157 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS05425 198dd19b6f870a2debb1d9c57dd331d0 266 PANTHER PTHR34385 12 266 4.0E-85 T 23-04-2016 CLI_RS05425 198dd19b6f870a2debb1d9c57dd331d0 266 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 115 241 3.7E-42 T 23-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 CLI_RS05425 198dd19b6f870a2debb1d9c57dd331d0 266 SUPERFAMILY SSF55166 98 250 2.62E-37 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CLI_RS05425 198dd19b6f870a2debb1d9c57dd331d0 266 PANTHER PTHR34385:SF1 12 266 4.0E-85 T 23-04-2016 CLI_RS15250 07f75b6b756b407cd96934dcab07fb4e 292 PANTHER PTHR30255 10 280 2.0E-74 T 23-04-2016 CLI_RS15250 07f75b6b756b407cd96934dcab07fb4e 292 SUPERFAMILY SSF64182 18 282 1.11E-56 T 23-04-2016 CLI_RS15250 07f75b6b756b407cd96934dcab07fb4e 292 Pfam PF01368 DHH family 42 189 8.4E-10 T 23-04-2016 IPR001667 DDH domain CLI_RS15250 07f75b6b756b407cd96934dcab07fb4e 292 PANTHER PTHR30255:SF2 10 280 2.0E-74 T 23-04-2016 CLI_RS14710 bf525718b2fe662165a55d3b2310062d 252 SUPERFAMILY SSF88697 2 70 1.29E-15 T 23-04-2016 IPR015947 PUA-like domain CLI_RS14710 bf525718b2fe662165a55d3b2310062d 252 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 248 1.4E-63 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS14710 bf525718b2fe662165a55d3b2310062d 252 PIRSF PIRSF015601 1 248 6.5E-68 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS14710 bf525718b2fe662165a55d3b2310062d 252 SUPERFAMILY SSF75217 72 248 8.29E-52 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CLI_RS14710 bf525718b2fe662165a55d3b2310062d 252 PANTHER PTHR30027 1 251 1.4E-93 T 23-04-2016 CLI_RS14710 bf525718b2fe662165a55d3b2310062d 252 Gene3D G3DSA:2.40.240.20 2 70 3.2E-23 T 23-04-2016 CLI_RS14710 bf525718b2fe662165a55d3b2310062d 252 Gene3D G3DSA:3.40.1280.10 73 249 6.3E-59 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLI_RS14710 bf525718b2fe662165a55d3b2310062d 252 Pfam PF04452 RNA methyltransferase 17 243 1.4E-74 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS14710 bf525718b2fe662165a55d3b2310062d 252 PANTHER PTHR30027:SF3 1 251 1.4E-93 T 23-04-2016 CLI_RS03280 2bf14cf9fc4218afe407e0e61df20240 230 SMART SM00862 152 228 1.6E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS03280 2bf14cf9fc4218afe407e0e61df20240 230 PANTHER PTHR26402:SF603 3 229 2.0E-96 T 23-04-2016 CLI_RS03280 2bf14cf9fc4218afe407e0e61df20240 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 4.5E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS03280 2bf14cf9fc4218afe407e0e61df20240 230 SMART SM00448 3 113 1.6E-41 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS03280 2bf14cf9fc4218afe407e0e61df20240 230 Gene3D G3DSA:1.10.10.10 130 229 1.5E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03280 2bf14cf9fc4218afe407e0e61df20240 230 Gene3D G3DSA:3.40.50.2300 3 125 2.5E-40 T 23-04-2016 CLI_RS03280 2bf14cf9fc4218afe407e0e61df20240 230 PANTHER PTHR26402 3 229 2.0E-96 T 23-04-2016 CLI_RS03280 2bf14cf9fc4218afe407e0e61df20240 230 SUPERFAMILY SSF52172 4 187 1.09E-40 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS03280 2bf14cf9fc4218afe407e0e61df20240 230 Pfam PF00072 Response regulator receiver domain 5 113 3.6E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS17900 3a5b63db378766b972c6803994116afb 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 1.7E-65 T 23-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 CLI_RS17900 3a5b63db378766b972c6803994116afb 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.829 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CLI_RS17900 3a5b63db378766b972c6803994116afb 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-15 T 23-04-2016 CLI_RS17900 3a5b63db378766b972c6803994116afb 141 Gene3D G3DSA:3.30.1550.10 2 71 5.2E-39 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal CLI_RS17900 3a5b63db378766b972c6803994116afb 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 1.1E-26 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CLI_RS17900 3a5b63db378766b972c6803994116afb 141 SUPERFAMILY SSF54747 3 72 8.11E-31 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal CLI_RS17900 3a5b63db378766b972c6803994116afb 141 SUPERFAMILY SSF46906 67 140 1.44E-27 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CLI_RS17900 3a5b63db378766b972c6803994116afb 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 4.7E-31 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal CLI_RS17900 3a5b63db378766b972c6803994116afb 141 Gene3D G3DSA:1.10.10.250 72 140 2.6E-33 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CLI_RS17900 3a5b63db378766b972c6803994116afb 141 SMART SM00649 9 140 3.2E-86 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CLI_RS17900 3a5b63db378766b972c6803994116afb 141 PANTHER PTHR11661 1 140 2.1E-76 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CLI_RS03630 8a5064069dae1bc802390bc67d063941 249 SUPERFAMILY SSF52540 2 246 5.95E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03630 8a5064069dae1bc802390bc67d063941 249 PIRSF PIRSF000363 1 249 1.1E-101 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CLI_RS03630 8a5064069dae1bc802390bc67d063941 249 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 2 246 6.2E-97 T 23-04-2016 CLI_RS03630 8a5064069dae1bc802390bc67d063941 249 PANTHER PTHR13696:SF5 1 249 3.2E-136 T 23-04-2016 CLI_RS03630 8a5064069dae1bc802390bc67d063941 249 PANTHER PTHR13696 1 249 3.2E-136 T 23-04-2016 CLI_RS03630 8a5064069dae1bc802390bc67d063941 249 Gene3D G3DSA:3.40.50.300 2 246 2.3E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03630 8a5064069dae1bc802390bc67d063941 249 ProSitePatterns PS00692 NifH/frxC family signature 2. 122 135 - T 23-04-2016 IPR030655 NifH/chlL conserved site CLI_RS03630 8a5064069dae1bc802390bc67d063941 249 ProSitePatterns PS00746 NifH/frxC family signature 1. 83 95 - T 23-04-2016 IPR030655 NifH/chlL conserved site CLI_RS03630 8a5064069dae1bc802390bc67d063941 249 PRINTS PR00091 Nitrogenase component II signature 7 20 5.8E-34 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CLI_RS03630 8a5064069dae1bc802390bc67d063941 249 PRINTS PR00091 Nitrogenase component II signature 121 136 5.8E-34 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CLI_RS03630 8a5064069dae1bc802390bc67d063941 249 PRINTS PR00091 Nitrogenase component II signature 29 44 5.8E-34 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CLI_RS03630 8a5064069dae1bc802390bc67d063941 249 PRINTS PR00091 Nitrogenase component II signature 81 95 5.8E-34 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CLI_RS03755 e1ee6c1c1c9250f9c42cd912feb56685 600 Pfam PF02687 FtsX-like permease family 475 591 4.2E-23 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS03755 e1ee6c1c1c9250f9c42cd912feb56685 600 Pfam PF02687 FtsX-like permease family 78 201 1.1E-14 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS03755 e1ee6c1c1c9250f9c42cd912feb56685 600 PANTHER PTHR30489 280 599 4.0E-18 T 23-04-2016 CLI_RS03755 e1ee6c1c1c9250f9c42cd912feb56685 600 PANTHER PTHR30489 15 60 4.0E-18 T 23-04-2016 CLI_RS14715 17bafc492d4671ad13285ff6aaa86034 312 PANTHER PTHR18895:SF3 76 312 1.2E-82 T 23-04-2016 CLI_RS14715 17bafc492d4671ad13285ff6aaa86034 312 PIRSF PIRSF000401 3 312 3.4E-114 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CLI_RS14715 17bafc492d4671ad13285ff6aaa86034 312 Gene3D G3DSA:3.40.50.150 115 306 7.4E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS14715 17bafc492d4671ad13285ff6aaa86034 312 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 4 310 1.3E-104 T 23-04-2016 CLI_RS14715 17bafc492d4671ad13285ff6aaa86034 312 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 5 311 35.629 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CLI_RS14715 17bafc492d4671ad13285ff6aaa86034 312 SUPERFAMILY SSF53335 96 307 4.51E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS14715 17bafc492d4671ad13285ff6aaa86034 312 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 5 304 3.8E-80 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CLI_RS14715 17bafc492d4671ad13285ff6aaa86034 312 PANTHER PTHR18895 76 312 1.2E-82 T 23-04-2016 CLI_RS00695 01eabbdb2d25fe8ba8db5086bd10e095 337 Gene3D G3DSA:3.30.200.20 8 100 1.2E-14 T 23-04-2016 CLI_RS00695 01eabbdb2d25fe8ba8db5086bd10e095 337 SUPERFAMILY SSF56112 18 334 1.34E-45 T 23-04-2016 IPR011009 Protein kinase-like domain CLI_RS00695 01eabbdb2d25fe8ba8db5086bd10e095 337 Gene3D G3DSA:3.90.1200.10 101 329 2.1E-58 T 23-04-2016 CLI_RS00695 01eabbdb2d25fe8ba8db5086bd10e095 337 Pfam PF01633 Choline/ethanolamine kinase 147 252 1.0E-8 T 23-04-2016 CLI_RS00695 01eabbdb2d25fe8ba8db5086bd10e095 337 PANTHER PTHR39179:SF1 1 336 2.2E-137 T 23-04-2016 CLI_RS00695 01eabbdb2d25fe8ba8db5086bd10e095 337 PANTHER PTHR39179 1 336 2.2E-137 T 23-04-2016 CLI_RS00695 01eabbdb2d25fe8ba8db5086bd10e095 337 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 26 332 1.8E-95 T 23-04-2016 IPR014255 Spore coat protein CotS CLI_RS03850 2412976708a47548cf39ce40bc02470f 321 SUPERFAMILY SSF46689 63 115 3.54E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03850 2412976708a47548cf39ce40bc02470f 321 PANTHER PTHR11019:SF128 12 117 3.1E-24 T 23-04-2016 CLI_RS03850 2412976708a47548cf39ce40bc02470f 321 Gene3D G3DSA:1.10.10.60 63 121 4.8E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03850 2412976708a47548cf39ce40bc02470f 321 Pfam PF12833 Helix-turn-helix domain 32 110 3.1E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS03850 2412976708a47548cf39ce40bc02470f 321 SMART SM00342 26 109 1.9E-27 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS03850 2412976708a47548cf39ce40bc02470f 321 Gene3D G3DSA:1.10.10.60 5 62 2.1E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03850 2412976708a47548cf39ce40bc02470f 321 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 93 109 7.2E-8 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS03850 2412976708a47548cf39ce40bc02470f 321 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 78 93 7.2E-8 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS03850 2412976708a47548cf39ce40bc02470f 321 PANTHER PTHR11019 12 117 3.1E-24 T 23-04-2016 CLI_RS14340 38dfd89b08981ee9e8d4e3cfc943da5e 159 Pfam PF00731 AIR carboxylase 2 147 1.2E-61 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CLI_RS14340 38dfd89b08981ee9e8d4e3cfc943da5e 159 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 153 30.616 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CLI_RS14340 38dfd89b08981ee9e8d4e3cfc943da5e 159 PIRSF PIRSF001338 1 158 3.5E-64 T 23-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 CLI_RS14340 38dfd89b08981ee9e8d4e3cfc943da5e 159 SMART SM01001 1 149 3.3E-85 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CLI_RS14340 38dfd89b08981ee9e8d4e3cfc943da5e 159 PANTHER PTHR23046 2 159 1.2E-77 T 23-04-2016 CLI_RS14340 38dfd89b08981ee9e8d4e3cfc943da5e 159 Gene3D G3DSA:3.40.50.7700 1 155 1.6E-66 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CLI_RS14340 38dfd89b08981ee9e8d4e3cfc943da5e 159 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 155 2.5E-58 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CLI_RS14340 38dfd89b08981ee9e8d4e3cfc943da5e 159 SUPERFAMILY SSF52255 1 156 6.67E-60 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CLI_RS07295 6fb17e207d46e47f6b1de617b55549d2 272 SMART SM00062 44 267 9.5E-55 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLI_RS07295 6fb17e207d46e47f6b1de617b55549d2 272 Gene3D G3DSA:3.40.190.10 41 120 1.9E-35 T 23-04-2016 CLI_RS07295 6fb17e207d46e47f6b1de617b55549d2 272 Gene3D G3DSA:3.40.190.10 226 269 1.9E-35 T 23-04-2016 CLI_RS07295 6fb17e207d46e47f6b1de617b55549d2 272 Gene3D G3DSA:3.40.190.10 121 218 1.2E-25 T 23-04-2016 CLI_RS07295 6fb17e207d46e47f6b1de617b55549d2 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 265 7.7E-54 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLI_RS07295 6fb17e207d46e47f6b1de617b55549d2 272 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 66 79 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CLI_RS07295 6fb17e207d46e47f6b1de617b55549d2 272 PANTHER PTHR18966 45 264 3.2E-47 T 23-04-2016 CLI_RS07295 6fb17e207d46e47f6b1de617b55549d2 272 SUPERFAMILY SSF53850 6 267 1.16E-59 T 23-04-2016 CLI_RS07295 6fb17e207d46e47f6b1de617b55549d2 272 PANTHER PTHR18966:SF205 45 264 3.2E-47 T 23-04-2016 CLI_RS09120 c08b553093bfd6422484633ddb1fec65 407 SMART SM00936 299 388 1.6E-11 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS09120 c08b553093bfd6422484633ddb1fec65 407 Gene3D G3DSA:3.40.710.10 15 297 1.6E-93 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS09120 c08b553093bfd6422484633ddb1fec65 407 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 299 387 3.3E-9 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS09120 c08b553093bfd6422484633ddb1fec65 407 SUPERFAMILY SSF56601 8 299 7.25E-79 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS09120 c08b553093bfd6422484633ddb1fec65 407 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 82 93 6.12E-15 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLI_RS09120 c08b553093bfd6422484633ddb1fec65 407 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 162 175 6.12E-15 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLI_RS09120 c08b553093bfd6422484633ddb1fec65 407 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 152 6.12E-15 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLI_RS09120 c08b553093bfd6422484633ddb1fec65 407 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 52 279 1.6E-75 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CLI_RS09120 c08b553093bfd6422484633ddb1fec65 407 PANTHER PTHR21581 52 406 1.2E-98 T 23-04-2016 CLI_RS00865 f69d174a0576a4a3b6f0f0449f8b44f8 209 Pfam PF14681 Uracil phosphoribosyltransferase 8 208 6.6E-75 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS00865 f69d174a0576a4a3b6f0f0449f8b44f8 209 Gene3D G3DSA:3.40.50.2020 4 209 3.7E-83 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS00865 f69d174a0576a4a3b6f0f0449f8b44f8 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 47.426 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 CLI_RS00865 f69d174a0576a4a3b6f0f0449f8b44f8 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 3.2E-90 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 CLI_RS00865 f69d174a0576a4a3b6f0f0449f8b44f8 209 PANTHER PTHR10285 9 198 1.6E-98 T 23-04-2016 CLI_RS00865 f69d174a0576a4a3b6f0f0449f8b44f8 209 SUPERFAMILY SSF53271 5 207 4.06E-71 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS12630 9792f811cef1e6c07beb215eed4111a9 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS12630 9792f811cef1e6c07beb215eed4111a9 249 Pfam PF00005 ABC transporter 19 174 2.1E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS12630 9792f811cef1e6c07beb215eed4111a9 249 SUPERFAMILY SSF52540 2 236 1.54E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12630 9792f811cef1e6c07beb215eed4111a9 249 PANTHER PTHR24220:SF585 5 247 3.2E-150 T 23-04-2016 CLI_RS12630 9792f811cef1e6c07beb215eed4111a9 249 PANTHER PTHR24220 5 247 3.2E-150 T 23-04-2016 CLI_RS12630 9792f811cef1e6c07beb215eed4111a9 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 9.8E-130 T 23-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CLI_RS12630 9792f811cef1e6c07beb215eed4111a9 249 Gene3D G3DSA:3.40.50.300 2 243 5.5E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12630 9792f811cef1e6c07beb215eed4111a9 249 SMART SM00382 28 228 8.6E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03940 71235ed6b823c294c5e3f89909b05f78 166 PANTHER PTHR33387 3 165 2.4E-69 T 23-04-2016 CLI_RS03940 71235ed6b823c294c5e3f89909b05f78 166 Gene3D G3DSA:2.60.120.10 2 165 1.4E-61 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS03940 71235ed6b823c294c5e3f89909b05f78 166 PANTHER PTHR33387:SF3 3 165 2.4E-69 T 23-04-2016 CLI_RS03940 71235ed6b823c294c5e3f89909b05f78 166 Pfam PF06172 Cupin superfamily (DUF985) 6 143 4.2E-44 T 23-04-2016 IPR009327 Cupin domain of unknown function DUF985 CLI_RS03940 71235ed6b823c294c5e3f89909b05f78 166 SUPERFAMILY SSF51182 2 165 4.63E-58 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS04655 0ce173b7e863604447541673ba53c99a 286 Pfam PF01381 Helix-turn-helix 57 108 2.6E-8 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS04655 0ce173b7e863604447541673ba53c99a 286 SUPERFAMILY SSF47413 60 109 7.17E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS04655 0ce173b7e863604447541673ba53c99a 286 Gene3D G3DSA:1.10.260.40 55 109 5.5E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS04655 0ce173b7e863604447541673ba53c99a 286 SMART SM00530 54 108 8.7E-8 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS01395 db555dcaaa0c969926e4dc06f614b6ba 538 SUPERFAMILY SSF48317 47 535 5.23E-112 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS01395 db555dcaaa0c969926e4dc06f614b6ba 538 Pfam PF01569 PAP2 superfamily 365 514 2.9E-7 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS01395 db555dcaaa0c969926e4dc06f614b6ba 538 Gene3D G3DSA:1.10.606.10 29 538 4.5E-193 T 23-04-2016 IPR016119 Bromoperoxidase/chloroperoxidase, C-terminal GO:0004601|GO:0055114 CLI_RS18105 de723b7c82885e8e05c89cb2f13d726c 160 PANTHER PTHR30437 1 157 3.7E-66 T 23-04-2016 CLI_RS18105 de723b7c82885e8e05c89cb2f13d726c 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CLI_RS18105 de723b7c82885e8e05c89cb2f13d726c 160 Gene3D G3DSA:1.10.287.180 5 78 1.0E-31 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CLI_RS18105 de723b7c82885e8e05c89cb2f13d726c 160 Gene3D G3DSA:3.10.50.30 79 158 4.0E-29 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CLI_RS18105 de723b7c82885e8e05c89cb2f13d726c 160 PIRSF PIRSF006092 1 160 5.5E-52 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CLI_RS18105 de723b7c82885e8e05c89cb2f13d726c 160 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 7.4E-31 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CLI_RS18105 de723b7c82885e8e05c89cb2f13d726c 160 SUPERFAMILY SSF54534 84 157 5.23E-22 T 23-04-2016 CLI_RS18105 de723b7c82885e8e05c89cb2f13d726c 160 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 158 5.0E-58 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CLI_RS18105 de723b7c82885e8e05c89cb2f13d726c 160 SUPERFAMILY SSF46557 5 80 2.22E-27 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CLI_RS18105 de723b7c82885e8e05c89cb2f13d726c 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 32.489 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CLI_RS18105 de723b7c82885e8e05c89cb2f13d726c 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 8.1E-26 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CLI_RS18105 de723b7c82885e8e05c89cb2f13d726c 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 123 139 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CLI_RS01585 82002eca11aaf72c0cf0c8bd6658dc70 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 230 339 1.7E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01585 82002eca11aaf72c0cf0c8bd6658dc70 349 PANTHER PTHR24423:SF539 96 341 6.4E-84 T 23-04-2016 CLI_RS01585 82002eca11aaf72c0cf0c8bd6658dc70 349 PANTHER PTHR24423:SF539 9 22 6.4E-84 T 23-04-2016 CLI_RS01585 82002eca11aaf72c0cf0c8bd6658dc70 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 7.5E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01585 82002eca11aaf72c0cf0c8bd6658dc70 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 322 7.5E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01585 82002eca11aaf72c0cf0c8bd6658dc70 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 341 7.5E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01585 82002eca11aaf72c0cf0c8bd6658dc70 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 7.5E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01585 82002eca11aaf72c0cf0c8bd6658dc70 349 SMART SM00387 229 344 3.3E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01585 82002eca11aaf72c0cf0c8bd6658dc70 349 PANTHER PTHR24423 96 341 6.4E-84 T 23-04-2016 CLI_RS01585 82002eca11aaf72c0cf0c8bd6658dc70 349 PANTHER PTHR24423 9 22 6.4E-84 T 23-04-2016 CLI_RS01585 82002eca11aaf72c0cf0c8bd6658dc70 349 Gene3D G3DSA:3.30.565.10 193 339 2.2E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01585 82002eca11aaf72c0cf0c8bd6658dc70 349 SUPERFAMILY SSF55874 189 340 2.62E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS00965 14d8419e2035399561c5955eba8fcc29 240 PANTHER PTHR11807 1 240 1.6E-160 T 23-04-2016 CLI_RS00965 14d8419e2035399561c5955eba8fcc29 240 Pfam PF01171 PP-loop family 24 200 2.7E-20 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CLI_RS00965 14d8419e2035399561c5955eba8fcc29 240 PIRSF PIRSF004976 1 240 5.6E-65 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CLI_RS00965 14d8419e2035399561c5955eba8fcc29 240 PANTHER PTHR11807:SF22 1 240 1.6E-160 T 23-04-2016 CLI_RS00965 14d8419e2035399561c5955eba8fcc29 240 Gene3D G3DSA:3.40.50.620 10 187 3.3E-20 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00965 14d8419e2035399561c5955eba8fcc29 240 SUPERFAMILY SSF52402 2 214 1.79E-51 T 23-04-2016 CLI_RS16485 80f87d8117ead80b1019e6430e400dcd 396 Pfam PF01979 Amidohydrolase family 49 392 7.0E-28 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CLI_RS16485 80f87d8117ead80b1019e6430e400dcd 396 PANTHER PTHR11647:SF70 1 395 5.6E-165 T 23-04-2016 CLI_RS16485 80f87d8117ead80b1019e6430e400dcd 396 Gene3D G3DSA:2.30.40.10 4 67 1.2E-18 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS16485 80f87d8117ead80b1019e6430e400dcd 396 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 19 395 4.2E-104 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16485 80f87d8117ead80b1019e6430e400dcd 396 PANTHER PTHR11647 1 395 5.6E-165 T 23-04-2016 CLI_RS16485 80f87d8117ead80b1019e6430e400dcd 396 SUPERFAMILY SSF51556 54 338 8.33E-83 T 23-04-2016 IPR032466 Metal-dependent hydrolase CLI_RS16485 80f87d8117ead80b1019e6430e400dcd 396 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 396 31.942 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16485 80f87d8117ead80b1019e6430e400dcd 396 ProSitePatterns PS00482 Dihydroorotase signature 1. 56 64 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16485 80f87d8117ead80b1019e6430e400dcd 396 ProSitePatterns PS00483 Dihydroorotase signature 2. 278 289 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16485 80f87d8117ead80b1019e6430e400dcd 396 SUPERFAMILY SSF51338 338 394 1.26E-26 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS16485 80f87d8117ead80b1019e6430e400dcd 396 SUPERFAMILY SSF51338 1 52 1.26E-26 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS16485 80f87d8117ead80b1019e6430e400dcd 396 Gene3D G3DSA:3.20.20.140 68 378 2.0E-89 T 23-04-2016 CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 Pfam PF01171 PP-loop family 20 201 1.1E-51 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 206 1.6E-58 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 PANTHER PTHR11807 1 462 1.4E-114 T 23-04-2016 CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 SMART SM00977 384 456 3.7E-31 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 Gene3D G3DSA:3.50.40.10 372 454 1.4E-4 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 SUPERFAMILY SSF82829 215 319 2.62E-10 T 23-04-2016 CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 296 24.25 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 SUPERFAMILY SSF52402 8 236 2.79E-55 T 23-04-2016 CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 384 429 3.2E-19 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 Gene3D G3DSA:3.40.50.620 1 185 1.5E-18 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 PANTHER PTHR11807:SF2 1 462 1.4E-114 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 Pfam PF11734 TilS substrate C-terminal domain 386 453 6.5E-16 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLI_RS18140 4f2097e432464e7576c0bb68b2e7cf56 468 SUPERFAMILY SSF56037 373 457 3.53E-24 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CLI_RS05225 b0ff52a1fe9fa887d05820669e9cfee9 824 Gene3D G3DSA:3.30.565.40 631 728 5.6E-9 T 23-04-2016 IPR025303 Domain of unknown function DUF4163 CLI_RS05225 b0ff52a1fe9fa887d05820669e9cfee9 824 Gene3D G3DSA:1.25.40.120 176 251 1.2E-6 T 23-04-2016 CLI_RS05225 b0ff52a1fe9fa887d05820669e9cfee9 824 Pfam PF14903 WG containing repeat 381 412 1.7E-8 T 23-04-2016 IPR032774 WG containing repeat CLI_RS05225 b0ff52a1fe9fa887d05820669e9cfee9 824 Pfam PF14903 WG containing repeat 306 334 8.0E-4 T 23-04-2016 IPR032774 WG containing repeat CLI_RS05225 b0ff52a1fe9fa887d05820669e9cfee9 824 Pfam PF14903 WG containing repeat 271 306 2.9E-7 T 23-04-2016 IPR032774 WG containing repeat CLI_RS05225 b0ff52a1fe9fa887d05820669e9cfee9 824 Pfam PF14903 WG containing repeat 452 481 1.3E-7 T 23-04-2016 IPR032774 WG containing repeat CLI_RS05225 b0ff52a1fe9fa887d05820669e9cfee9 824 Pfam PF14903 WG containing repeat 490 508 2.2E-4 T 23-04-2016 IPR032774 WG containing repeat CLI_RS05225 b0ff52a1fe9fa887d05820669e9cfee9 824 Pfam PF14903 WG containing repeat 416 447 0.033 T 23-04-2016 IPR032774 WG containing repeat CLI_RS05225 b0ff52a1fe9fa887d05820669e9cfee9 824 Pfam PF11738 Protein of unknown function (DUF3298) 732 807 3.1E-20 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 CLI_RS05225 b0ff52a1fe9fa887d05820669e9cfee9 824 PANTHER PTHR37841 213 824 9.3E-126 T 23-04-2016 CLI_RS05225 b0ff52a1fe9fa887d05820669e9cfee9 824 Gene3D G3DSA:3.90.640.20 732 822 1.4E-23 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 CLI_RS05225 b0ff52a1fe9fa887d05820669e9cfee9 824 SUPERFAMILY SSF48452 183 236 2.61E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS03845 b30dd18e9ff62842c7169144cbe7e4db 145 SUPERFAMILY SSF55729 1 143 1.89E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03845 b30dd18e9ff62842c7169144cbe7e4db 145 Gene3D G3DSA:3.40.630.30 1 143 2.2E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03845 b30dd18e9ff62842c7169144cbe7e4db 145 Pfam PF13673 Acetyltransferase (GNAT) domain 40 143 2.2E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS01305 b28bfca2352ab918091efd5eac821f51 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 39.541 T 23-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CLI_RS01305 b28bfca2352ab918091efd5eac821f51 248 SUPERFAMILY SSF51351 1 248 2.88E-99 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CLI_RS01305 b28bfca2352ab918091efd5eac821f51 248 PANTHER PTHR21139 1 247 4.9E-129 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CLI_RS01305 b28bfca2352ab918091efd5eac821f51 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 23-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CLI_RS01305 b28bfca2352ab918091efd5eac821f51 248 Pfam PF00121 Triosephosphate isomerase 5 246 1.8E-95 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CLI_RS01305 b28bfca2352ab918091efd5eac821f51 248 Gene3D G3DSA:3.20.20.70 1 247 1.3E-107 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS01305 b28bfca2352ab918091efd5eac821f51 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 5.4E-60 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CLI_RS11245 959abd4c1353a5b1b5e279c0c430c246 180 Gene3D G3DSA:3.40.220.10 7 175 2.6E-71 T 23-04-2016 CLI_RS11245 959abd4c1353a5b1b5e279c0c430c246 180 PANTHER PTHR11106 7 175 3.8E-90 T 23-04-2016 CLI_RS11245 959abd4c1353a5b1b5e279c0c430c246 180 Pfam PF01661 Macro domain 25 141 8.3E-45 T 23-04-2016 IPR002589 Macro domain CLI_RS11245 959abd4c1353a5b1b5e279c0c430c246 180 SMART SM00506 8 141 1.9E-53 T 23-04-2016 IPR002589 Macro domain CLI_RS11245 959abd4c1353a5b1b5e279c0c430c246 180 SUPERFAMILY SSF52949 8 175 4.21E-67 T 23-04-2016 CLI_RS11995 6182b3ecf3c8059b14baf174064c0636 194 PANTHER PTHR14269 1 190 6.9E-45 T 23-04-2016 CLI_RS11995 6182b3ecf3c8059b14baf174064c0636 194 PIRSF PIRSF000847 1 194 6.8E-53 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CLI_RS11995 6182b3ecf3c8059b14baf174064c0636 194 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 189 1.6E-49 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CLI_RS11995 6182b3ecf3c8059b14baf174064c0636 194 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLI_RS11995 6182b3ecf3c8059b14baf174064c0636 194 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 70 4.2E-18 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLI_RS00590 cea21a606b2b36ea3aafa71a5502fc1e 356 Gene3D G3DSA:3.30.450.40 34 203 2.9E-13 T 23-04-2016 IPR029016 GAF domain-like CLI_RS00590 cea21a606b2b36ea3aafa71a5502fc1e 356 PANTHER PTHR10799:SF750 1 100 2.4E-16 T 23-04-2016 CLI_RS00590 cea21a606b2b36ea3aafa71a5502fc1e 356 PANTHER PTHR10799:SF750 235 351 2.4E-16 T 23-04-2016 CLI_RS00590 cea21a606b2b36ea3aafa71a5502fc1e 356 SMART SM00267 196 355 1.4E-38 T 23-04-2016 IPR000160 GGDEF domain CLI_RS00590 cea21a606b2b36ea3aafa71a5502fc1e 356 Gene3D G3DSA:3.30.70.270 209 352 2.3E-37 T 23-04-2016 CLI_RS00590 cea21a606b2b36ea3aafa71a5502fc1e 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 353 9.4E-37 T 23-04-2016 IPR000160 GGDEF domain CLI_RS00590 cea21a606b2b36ea3aafa71a5502fc1e 356 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 205 352 9.0E-37 T 23-04-2016 IPR000160 GGDEF domain CLI_RS00590 cea21a606b2b36ea3aafa71a5502fc1e 356 PANTHER PTHR10799 1 100 2.4E-16 T 23-04-2016 CLI_RS00590 cea21a606b2b36ea3aafa71a5502fc1e 356 PANTHER PTHR10799 235 351 2.4E-16 T 23-04-2016 CLI_RS00590 cea21a606b2b36ea3aafa71a5502fc1e 356 SUPERFAMILY SSF55073 212 352 1.73E-35 T 23-04-2016 IPR029787 Nucleotide cyclase CLI_RS00590 cea21a606b2b36ea3aafa71a5502fc1e 356 SUPERFAMILY SSF55781 36 202 1.57E-9 T 23-04-2016 IPR029016 GAF domain-like CLI_RS17100 a19234d2600355f63f2443bdb300e535 658 Gene3D G3DSA:1.10.8.60 342 407 3.8E-23 T 23-04-2016 CLI_RS17100 a19234d2600355f63f2443bdb300e535 658 Pfam PF01434 Peptidase family M41 394 600 6.7E-72 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CLI_RS17100 a19234d2600355f63f2443bdb300e535 658 PANTHER PTHR23076 1 652 6.5E-286 T 23-04-2016 CLI_RS17100 a19234d2600355f63f2443bdb300e535 658 Gene3D G3DSA:3.40.50.300 162 341 2.1E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17100 a19234d2600355f63f2443bdb300e535 658 SUPERFAMILY SSF52540 162 416 5.27E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17100 a19234d2600355f63f2443bdb300e535 658 ProSitePatterns PS00674 AAA-protein family signature. 303 321 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CLI_RS17100 a19234d2600355f63f2443bdb300e535 658 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 13 617 35.062 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLI_RS17100 a19234d2600355f63f2443bdb300e535 658 Pfam PF06480 FtsH Extracellular 18 104 6.6E-9 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 CLI_RS17100 a19234d2600355f63f2443bdb300e535 658 SUPERFAMILY SSF140990 414 605 1.19E-70 T 23-04-2016 CLI_RS17100 a19234d2600355f63f2443bdb300e535 658 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 332 1.1E-45 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS17100 a19234d2600355f63f2443bdb300e535 658 SMART SM00382 197 335 6.2E-25 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS17100 a19234d2600355f63f2443bdb300e535 658 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 114 601 1.8E-208 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLI_RS07010 2a875c7835e5e38676b6663353b72e76 281 PANTHER PTHR30514 1 270 2.7E-98 T 23-04-2016 CLI_RS07010 2a875c7835e5e38676b6663353b72e76 281 Gene3D G3DSA:3.40.50.10490 84 276 3.2E-47 T 23-04-2016 CLI_RS07010 2a875c7835e5e38676b6663353b72e76 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 74 5.7E-17 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLI_RS07010 2a875c7835e5e38676b6663353b72e76 281 SUPERFAMILY SSF53697 93 269 2.09E-44 T 23-04-2016 CLI_RS07010 2a875c7835e5e38676b6663353b72e76 281 SUPERFAMILY SSF46689 1 74 8.24E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS07010 2a875c7835e5e38676b6663353b72e76 281 PANTHER PTHR30514:SF1 1 270 2.7E-98 T 23-04-2016 CLI_RS07010 2a875c7835e5e38676b6663353b72e76 281 Pfam PF01380 SIS domain 126 254 1.2E-27 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CLI_RS07010 2a875c7835e5e38676b6663353b72e76 281 Gene3D G3DSA:1.10.10.10 1 73 2.8E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12080 cbc4aa5ec868dd6b9fa1e79804fbb9e3 153 Gene3D G3DSA:3.30.300.70 3 82 7.2E-30 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal CLI_RS12080 cbc4aa5ec868dd6b9fa1e79804fbb9e3 153 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 153 23.189 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 CLI_RS12080 cbc4aa5ec868dd6b9fa1e79804fbb9e3 153 SUPERFAMILY SSF75420 4 85 1.7E-26 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal CLI_RS12080 cbc4aa5ec868dd6b9fa1e79804fbb9e3 153 Pfam PF02576 Putative ribosome maturation factor RimP 14 148 2.8E-43 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 CLI_RS12080 cbc4aa5ec868dd6b9fa1e79804fbb9e3 153 Gene3D G3DSA:2.30.30.180 90 149 3.9E-16 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal CLI_RS12080 cbc4aa5ec868dd6b9fa1e79804fbb9e3 153 SUPERFAMILY SSF74942 86 149 1.22E-12 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal CLI_RS12080 cbc4aa5ec868dd6b9fa1e79804fbb9e3 153 PANTHER PTHR33867:SF1 2 152 2.8E-49 T 23-04-2016 CLI_RS12080 cbc4aa5ec868dd6b9fa1e79804fbb9e3 153 PANTHER PTHR33867 2 152 2.8E-49 T 23-04-2016 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 5 441 3.0E-123 T 23-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 PANTHER PTHR22807 1 441 1.2E-153 T 23-04-2016 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 SUPERFAMILY SSF48013 3 153 1.96E-34 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 Gene3D G3DSA:3.30.70.1170 179 235 5.1E-7 T 23-04-2016 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 Pfam PF01189 16S rRNA methyltransferase RsmB/F 247 440 9.7E-59 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 Gene3D G3DSA:3.40.50.150 237 442 1.9E-61 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 PANTHER PTHR22807:SF30 1 441 1.2E-153 T 23-04-2016 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 227 241 2.3E-26 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 424 441 2.3E-26 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 323 335 2.3E-26 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 373 389 2.3E-26 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 256 266 2.3E-26 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 SUPERFAMILY SSF53335 139 442 3.22E-71 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 Pfam PF01029 NusB family 3 126 1.2E-31 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLI_RS12540 16806c82f916583a6886cd3d4c9744bb 442 Gene3D G3DSA:1.10.940.10 1 154 3.4E-44 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLI_RS05395 09b29713da938a3a9b2a0891aa47522b 69 Pfam PF04023 FeoA domain 1 69 1.8E-14 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLI_RS05395 09b29713da938a3a9b2a0891aa47522b 69 PANTHER PTHR33238 1 69 3.7E-18 T 23-04-2016 CLI_RS05395 09b29713da938a3a9b2a0891aa47522b 69 SUPERFAMILY SSF50037 3 69 8.24E-12 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal CLI_RS05395 09b29713da938a3a9b2a0891aa47522b 69 SMART SM00899 1 69 1.7E-8 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLI_RS11010 c8c7e7f68693c623b2c34bc648d734dd 564 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 146 283 6.2E-18 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS11010 c8c7e7f68693c623b2c34bc648d734dd 564 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 7 134 6.1E-11 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS11010 c8c7e7f68693c623b2c34bc648d734dd 564 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 304 553 3.8E-74 T 23-04-2016 IPR008275 CoA enzyme activase CLI_RS11010 c8c7e7f68693c623b2c34bc648d734dd 564 SUPERFAMILY SSF53067 303 556 7.16E-38 T 23-04-2016 CLI_RS11010 c8c7e7f68693c623b2c34bc648d734dd 564 PANTHER PTHR32329:SF2 1 564 6.8E-289 T 23-04-2016 CLI_RS11010 c8c7e7f68693c623b2c34bc648d734dd 564 PANTHER PTHR32329 1 564 6.8E-289 T 23-04-2016 CLI_RS11010 c8c7e7f68693c623b2c34bc648d734dd 564 Gene3D G3DSA:3.30.420.40 397 535 7.2E-48 T 23-04-2016 CLI_RS11010 c8c7e7f68693c623b2c34bc648d734dd 564 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 306 554 9.0E-58 T 23-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS07235 2745a16ad2d80c0926169a7f7b9a7afa 278 PANTHER PTHR10534:SF0 1 276 8.7E-112 T 23-04-2016 CLI_RS07235 2745a16ad2d80c0926169a7f7b9a7afa 278 Gene3D G3DSA:3.40.1190.20 5 273 4.9E-59 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS07235 2745a16ad2d80c0926169a7f7b9a7afa 278 PANTHER PTHR10534 1 276 8.7E-112 T 23-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 CLI_RS07235 2745a16ad2d80c0926169a7f7b9a7afa 278 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 1.4E-24 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 CLI_RS07235 2745a16ad2d80c0926169a7f7b9a7afa 278 SUPERFAMILY SSF53613 5 276 5.92E-58 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS09175 54503c08220242a923727e77cf925407 251 SUPERFAMILY SSF54001 27 139 7.52E-44 T 23-04-2016 CLI_RS09175 54503c08220242a923727e77cf925407 251 Pfam PF00877 NlpC/P60 family 43 134 3.7E-29 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS09175 54503c08220242a923727e77cf925407 251 PANTHER PTHR21666 31 142 2.8E-37 T 23-04-2016 CLI_RS09175 54503c08220242a923727e77cf925407 251 Gene3D G3DSA:3.90.1720.10 26 140 5.3E-47 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS10885 fc2fe0db5ac406ab1977a4d3dc14fb65 229 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 41 229 1.7E-28 T 23-04-2016 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 CLI_RS10885 fc2fe0db5ac406ab1977a4d3dc14fb65 229 PANTHER PTHR36984 2 229 1.4E-64 T 23-04-2016 CLI_RS10885 fc2fe0db5ac406ab1977a4d3dc14fb65 229 Pfam PF01881 CRISPR associated protein Cas6 92 228 2.4E-8 T 23-04-2016 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 CLI_RS13350 af5678b14fb4976658d12025f5baf970 133 PANTHER PTHR30435:SF12 6 133 1.3E-36 T 23-04-2016 CLI_RS13350 af5678b14fb4976658d12025f5baf970 133 PANTHER PTHR30435 6 133 1.3E-36 T 23-04-2016 CLI_RS13350 af5678b14fb4976658d12025f5baf970 133 Pfam PF00460 Flagella basal body rod protein 20 43 4.3E-6 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLI_RS13350 af5678b14fb4976658d12025f5baf970 133 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 14 130 7.6E-27 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CLI_RS13350 af5678b14fb4976658d12025f5baf970 133 PIRSF PIRSF002889 4 133 1.9E-34 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CLI_RS02160 4082a07cf48163031a98f739fab24b30 483 Pfam PF13520 Amino acid permease 23 440 1.9E-46 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS02160 4082a07cf48163031a98f739fab24b30 483 PIRSF PIRSF006060 4 480 2.0E-89 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS02160 4082a07cf48163031a98f739fab24b30 483 PANTHER PTHR11785 9 480 7.5E-107 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS02160 4082a07cf48163031a98f739fab24b30 483 PANTHER PTHR11785:SF342 9 480 7.5E-107 T 23-04-2016 CLI_RS15345 26f64ef2ce25738a2ceb693fa82495ba 594 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 189 534 1.7E-139 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 CLI_RS15345 26f64ef2ce25738a2ceb693fa82495ba 594 Gene3D G3DSA:3.40.140.10 76 117 4.0E-4 T 23-04-2016 CLI_RS15345 26f64ef2ce25738a2ceb693fa82495ba 594 SUPERFAMILY SSF52540 362 560 5.2E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15345 26f64ef2ce25738a2ceb693fa82495ba 594 Pfam PF13167 GTP-binding GTPase N-terminal 190 278 4.5E-32 T 23-04-2016 IPR025121 GTPase HflX, N-terminal CLI_RS15345 26f64ef2ce25738a2ceb693fa82495ba 594 Gene3D G3DSA:3.40.50.300 343 372 8.8E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15345 26f64ef2ce25738a2ceb693fa82495ba 594 PANTHER PTHR10229:SF0 26 590 2.6E-244 T 23-04-2016 CLI_RS15345 26f64ef2ce25738a2ceb693fa82495ba 594 Hamap MF_00900 GTPase HflX [hflX]. 193 563 46.066 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 CLI_RS15345 26f64ef2ce25738a2ceb693fa82495ba 594 Gene3D G3DSA:3.40.50.300 373 535 1.3E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15345 26f64ef2ce25738a2ceb693fa82495ba 594 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 362 531 3.2E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS15345 26f64ef2ce25738a2ceb693fa82495ba 594 PANTHER PTHR10229 26 590 2.6E-244 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 CLI_RS15345 26f64ef2ce25738a2ceb693fa82495ba 594 Pfam PF01926 50S ribosome-binding GTPase 363 491 3.0E-19 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS15345 26f64ef2ce25738a2ceb693fa82495ba 594 Pfam PF16360 GTP-binding GTPase Middle Region 280 358 2.3E-29 T 23-04-2016 IPR032305 GTP-binding protein, middle domain CLI_RS08220 80c4f677e779955c50d092e3e8625e37 574 SUPERFAMILY SSF90123 8 316 4.45E-42 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS08220 80c4f677e779955c50d092e3e8625e37 574 Pfam PF00005 ABC transporter 348 496 3.2E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS08220 80c4f677e779955c50d092e3e8625e37 574 Gene3D G3DSA:1.20.1560.10 9 315 1.7E-33 T 23-04-2016 CLI_RS08220 80c4f677e779955c50d092e3e8625e37 574 Pfam PF00664 ABC transporter transmembrane region 21 280 1.9E-21 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS08220 80c4f677e779955c50d092e3e8625e37 574 Gene3D G3DSA:3.40.50.300 331 562 2.1E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08220 80c4f677e779955c50d092e3e8625e37 574 PANTHER PTHR24222 5 574 1.3E-177 T 23-04-2016 CLI_RS08220 80c4f677e779955c50d092e3e8625e37 574 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS08220 80c4f677e779955c50d092e3e8625e37 574 SMART SM00382 356 548 1.4E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS08220 80c4f677e779955c50d092e3e8625e37 574 PANTHER PTHR24222:SF29 5 574 1.3E-177 T 23-04-2016 CLI_RS08220 80c4f677e779955c50d092e3e8625e37 574 SUPERFAMILY SSF52540 326 563 6.35E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17200 bd48b0557aeafb65179c6c43612362c3 430 PANTHER PTHR33989:SF4 1 430 3.5E-206 T 23-04-2016 CLI_RS17200 bd48b0557aeafb65179c6c43612362c3 430 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 419 5.0E-120 T 23-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CLI_RS17200 bd48b0557aeafb65179c6c43612362c3 430 Pfam PF02378 Phosphotransferase system, EIIC 29 349 5.0E-54 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS17200 bd48b0557aeafb65179c6c43612362c3 430 PANTHER PTHR33989 1 430 3.5E-206 T 23-04-2016 CLI_RS17200 bd48b0557aeafb65179c6c43612362c3 430 PIRSF PIRSF006351 1 429 9.7E-134 T 23-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CLI_RS08865 2bc62764df76e5102e48e0b2094d07b7 673 SUPERFAMILY SSF58104 336 370 4.32E-68 T 23-04-2016 CLI_RS08865 2bc62764df76e5102e48e0b2094d07b7 673 SUPERFAMILY SSF58104 403 672 4.32E-68 T 23-04-2016 CLI_RS08865 2bc62764df76e5102e48e0b2094d07b7 673 PANTHER PTHR32089:SF1 107 673 8.5E-133 T 23-04-2016 CLI_RS08865 2bc62764df76e5102e48e0b2094d07b7 673 SMART SM00283 397 672 6.8E-70 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS08865 2bc62764df76e5102e48e0b2094d07b7 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 454 656 4.4E-49 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS08865 2bc62764df76e5102e48e0b2094d07b7 673 Gene3D G3DSA:1.10.287.950 414 627 5.6E-49 T 23-04-2016 CLI_RS08865 2bc62764df76e5102e48e0b2094d07b7 673 SUPERFAMILY SSF103190 167 292 7.46E-20 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS08865 2bc62764df76e5102e48e0b2094d07b7 673 Pfam PF00672 HAMP domain 297 365 8.1E-15 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS08865 2bc62764df76e5102e48e0b2094d07b7 673 Pfam PF17203 Single cache domain 3 190 292 1.9E-13 T 23-04-2016 IPR033463 Single cache domain 3 CLI_RS08865 2bc62764df76e5102e48e0b2094d07b7 673 Gene3D G3DSA:3.30.450.20 185 292 6.8E-18 T 23-04-2016 CLI_RS08865 2bc62764df76e5102e48e0b2094d07b7 673 PANTHER PTHR32089 107 673 8.5E-133 T 23-04-2016 CLI_RS08865 2bc62764df76e5102e48e0b2094d07b7 673 SMART SM00304 316 368 7.2E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS17460 9e0be2dfb9acb49356b030a332d630d8 285 Pfam PF03631 Virulence factor BrkB 22 271 6.4E-66 T 23-04-2016 IPR017039 Virulence factor BrkB CLI_RS17460 9e0be2dfb9acb49356b030a332d630d8 285 PIRSF PIRSF035875 2 284 5.1E-79 T 23-04-2016 IPR017039 Virulence factor BrkB CLI_RS17460 9e0be2dfb9acb49356b030a332d630d8 285 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 14 271 3.5E-51 T 23-04-2016 IPR017039 Virulence factor BrkB CLI_RS17460 9e0be2dfb9acb49356b030a332d630d8 285 PANTHER PTHR30213:SF1 7 283 7.2E-84 T 23-04-2016 CLI_RS17460 9e0be2dfb9acb49356b030a332d630d8 285 PANTHER PTHR30213 7 283 7.2E-84 T 23-04-2016 CLI_RS04625 6a056882bcb918e58563f3d09951f633 268 PANTHER PTHR30002 7 267 3.9E-100 T 23-04-2016 CLI_RS04625 6a056882bcb918e58563f3d09951f633 268 SUPERFAMILY SSF54862 195 222 2.39E-5 T 23-04-2016 CLI_RS04625 6a056882bcb918e58563f3d09951f633 268 PANTHER PTHR30002:SF2 7 267 3.9E-100 T 23-04-2016 CLI_RS04625 6a056882bcb918e58563f3d09951f633 268 Gene3D G3DSA:3.30.70.20 195 218 8.9E-4 T 23-04-2016 CLI_RS13950 b5af3296587fbcfa78e9dec3c96fea6d 136 PANTHER PTHR31964:SF26 5 136 7.8E-27 T 23-04-2016 CLI_RS13950 b5af3296587fbcfa78e9dec3c96fea6d 136 Pfam PF00582 Universal stress protein family 5 136 1.9E-17 T 23-04-2016 IPR006016 UspA GO:0006950 CLI_RS13950 b5af3296587fbcfa78e9dec3c96fea6d 136 PANTHER PTHR31964 5 136 7.8E-27 T 23-04-2016 CLI_RS13950 b5af3296587fbcfa78e9dec3c96fea6d 136 Gene3D G3DSA:3.40.50.620 5 136 1.6E-24 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS13950 b5af3296587fbcfa78e9dec3c96fea6d 136 SUPERFAMILY SSF52402 5 136 2.09E-23 T 23-04-2016 CLI_RS13950 b5af3296587fbcfa78e9dec3c96fea6d 136 PRINTS PR01438 Universal stress protein signature 115 136 3.9E-11 T 23-04-2016 IPR006015 Universal stress protein A CLI_RS13950 b5af3296587fbcfa78e9dec3c96fea6d 136 PRINTS PR01438 Universal stress protein signature 98 110 3.9E-11 T 23-04-2016 IPR006015 Universal stress protein A CLI_RS13950 b5af3296587fbcfa78e9dec3c96fea6d 136 PRINTS PR01438 Universal stress protein signature 3 21 3.9E-11 T 23-04-2016 IPR006015 Universal stress protein A CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 Gene3D G3DSA:3.40.50.300 59 270 8.9E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 SUPERFAMILY SSF54211 250 264 2.66E-36 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 SUPERFAMILY SSF54211 298 452 2.66E-36 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 Pfam PF13541 Subunit ChlI of Mg-chelatase 342 426 3.7E-10 T 23-04-2016 CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 Gene3D G3DSA:3.30.230.10 280 451 2.6E-28 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 Pfam PF13481 AAA domain 60 217 2.5E-15 T 23-04-2016 CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 SUPERFAMILY SSF52540 62 286 5.73E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 PRINTS PR01874 DNA repair protein radA signature 169 193 1.3E-90 T 23-04-2016 CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 PRINTS PR01874 DNA repair protein radA signature 119 136 1.3E-90 T 23-04-2016 CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 PRINTS PR01874 DNA repair protein radA signature 317 340 1.3E-90 T 23-04-2016 CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 PRINTS PR01874 DNA repair protein radA signature 243 269 1.3E-90 T 23-04-2016 CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 PRINTS PR01874 DNA repair protein radA signature 208 236 1.3E-90 T 23-04-2016 CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 PRINTS PR01874 DNA repair protein radA signature 10 34 1.3E-90 T 23-04-2016 CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 PRINTS PR01874 DNA repair protein radA signature 77 105 1.3E-90 T 23-04-2016 CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 445 1.2E-170 T 23-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 SMART SM00382 85 239 6.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS17995 3b26a870f7dea319a255b729f374b3eb 452 PANTHER PTHR32472 1 452 8.6E-197 T 23-04-2016 CLI_RS08755 eb1d35aeaf75c12d866fd2045df03b25 427 PANTHER PTHR11808:SF53 27 419 4.4E-191 T 23-04-2016 CLI_RS08755 eb1d35aeaf75c12d866fd2045df03b25 427 Gene3D G3DSA:3.40.640.10 49 279 1.9E-35 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS08755 eb1d35aeaf75c12d866fd2045df03b25 427 SUPERFAMILY SSF53383 48 379 6.44E-41 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS08755 eb1d35aeaf75c12d866fd2045df03b25 427 Pfam PF06838 Methionine gamma-lyase 21 425 4.4E-206 T 23-04-2016 IPR009651 Putative methionine gamma-lyase CLI_RS08755 eb1d35aeaf75c12d866fd2045df03b25 427 PANTHER PTHR11808 27 419 4.4E-191 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS03520 fd43c68109416dd71100017d8d153717 251 Pfam PF04282 Family of unknown function (DUF438) 9 74 1.1E-20 T 23-04-2016 IPR007380 Domain of unknown function DUF438 CLI_RS03520 fd43c68109416dd71100017d8d153717 251 Gene3D G3DSA:1.20.120.520 79 248 4.3E-39 T 23-04-2016 CLI_RS03520 fd43c68109416dd71100017d8d153717 251 PANTHER PTHR39966 75 242 7.5E-12 T 23-04-2016 CLI_RS03520 fd43c68109416dd71100017d8d153717 251 Pfam PF01814 Hemerythrin HHE cation binding domain 84 220 6.4E-21 T 23-04-2016 IPR012312 Haemerythrin-like CLI_RS06675 38bfb9e6b96675ac286ad6f6f6ac8d81 157 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLI_RS06675 38bfb9e6b96675ac286ad6f6f6ac8d81 157 Gene3D G3DSA:3.40.140.10 2 149 2.8E-43 T 23-04-2016 CLI_RS06675 38bfb9e6b96675ac286ad6f6f6ac8d81 157 PANTHER PTHR11079 4 157 4.7E-33 T 23-04-2016 CLI_RS06675 38bfb9e6b96675ac286ad6f6f6ac8d81 157 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 101 3.8E-23 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CLI_RS06675 38bfb9e6b96675ac286ad6f6f6ac8d81 157 SUPERFAMILY SSF53927 5 150 3.9E-41 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CLI_RS06675 38bfb9e6b96675ac286ad6f6f6ac8d81 157 PANTHER PTHR11079:SF25 4 157 4.7E-33 T 23-04-2016 CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 SUPERFAMILY SSF52540 4 175 5.56E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 Pfam PF00005 ABC transporter 305 430 1.0E-19 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 Pfam PF00005 ABC transporter 23 126 2.6E-15 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 Gene3D G3DSA:3.40.50.300 286 507 1.0E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 PANTHER PTHR19211 1 208 2.4E-125 T 23-04-2016 CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 PANTHER PTHR19211 236 487 2.4E-125 T 23-04-2016 CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 PANTHER PTHR19211 514 550 2.4E-125 T 23-04-2016 CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 SUPERFAMILY SSF52540 279 490 3.58E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 Gene3D G3DSA:3.40.50.300 29 170 1.3E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 SMART SM00382 28 171 1.2E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 SMART SM00382 313 475 4.1E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 PANTHER PTHR19211:SF54 1 208 2.4E-125 T 23-04-2016 CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 PANTHER PTHR19211:SF54 236 487 2.4E-125 T 23-04-2016 CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 PANTHER PTHR19211:SF54 514 550 2.4E-125 T 23-04-2016 CLI_RS02990 a0ce99a9ea806d34f0eba869deb913b8 552 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 PANTHER PTHR11390:SF21 1 495 1.8E-172 T 23-04-2016 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 PANTHER PTHR11390:SF21 516 610 1.8E-172 T 23-04-2016 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 Pfam PF01131 DNA topoisomerase 162 589 5.5E-107 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 Gene3D G3DSA:1.10.460.10 165 223 4.9E-42 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 Gene3D G3DSA:1.10.460.10 474 603 4.9E-42 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 SMART SM00493 2 135 2.0E-18 T 23-04-2016 IPR006171 Toprim domain CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 PANTHER PTHR11390 1 495 1.8E-172 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 PANTHER PTHR11390 516 610 1.8E-172 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 SMART SM00437 277 553 2.2E-54 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 1.6E-20 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 109 122 1.6E-20 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 199 217 1.6E-20 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 1.6E-20 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 516 530 1.6E-20 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 Pfam PF01751 Toprim domain 4 144 3.5E-17 T 23-04-2016 IPR006171 Toprim domain CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 Gene3D G3DSA:3.40.50.140 3 161 5.7E-43 T 23-04-2016 IPR006171 Toprim domain CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 SUPERFAMILY SSF56712 3 603 1.96E-158 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 Gene3D G3DSA:2.70.20.10 363 473 3.6E-32 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 Gene3D G3DSA:2.70.20.10 225 257 3.6E-32 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLI_RS07745 560cee0d272a41d7bb6f2ae1ed3b4fbb 619 SMART SM00436 135 229 5.7E-22 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CLI_RS00240 ca697ca3725092f9ab983858916e981b 314 Gene3D G3DSA:3.40.630.30 137 310 7.2E-46 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS00240 ca697ca3725092f9ab983858916e981b 314 PANTHER PTHR13256 118 314 8.2E-101 T 23-04-2016 CLI_RS00240 ca697ca3725092f9ab983858916e981b 314 SUPERFAMILY SSF55729 139 310 1.39E-41 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS00240 ca697ca3725092f9ab983858916e981b 314 Gene3D G3DSA:3.40.630.30 3 130 4.9E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS00240 ca697ca3725092f9ab983858916e981b 314 PANTHER PTHR13256:SF24 118 314 8.2E-101 T 23-04-2016 CLI_RS00240 ca697ca3725092f9ab983858916e981b 314 Pfam PF13302 Acetyltransferase (GNAT) domain 148 286 2.2E-20 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS00775 80732e8e7155deea54412f73dff83845 413 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 206 342 1.0E-10 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS00775 80732e8e7155deea54412f73dff83845 413 Gene3D G3DSA:3.40.50.2000 173 350 2.8E-26 T 23-04-2016 CLI_RS00775 80732e8e7155deea54412f73dff83845 413 SUPERFAMILY SSF53756 1 61 7.12E-35 T 23-04-2016 CLI_RS00775 80732e8e7155deea54412f73dff83845 413 SUPERFAMILY SSF53756 88 367 7.12E-35 T 23-04-2016 CLI_RS00775 80732e8e7155deea54412f73dff83845 413 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 14 180 8.0E-48 T 23-04-2016 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 CLI_RS00775 80732e8e7155deea54412f73dff83845 413 PANTHER PTHR21015:SF21 1 388 1.0E-139 T 23-04-2016 CLI_RS00775 80732e8e7155deea54412f73dff83845 413 PANTHER PTHR21015 1 388 1.0E-139 T 23-04-2016 CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 Pfam PF00717 Peptidase S24-like 32 101 7.2E-19 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 121 140 3.7E-21 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 25 41 3.7E-21 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 77 89 3.7E-21 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 ProSitePatterns PS00761 Signal peptidases I signature 3. 126 139 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 SUPERFAMILY SSF51306 24 169 2.09E-52 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 9 163 1.7E-52 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 Gene3D G3DSA:2.10.109.10 121 171 7.8E-43 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 Gene3D G3DSA:2.10.109.10 21 87 7.8E-43 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 PANTHER PTHR12383:SF14 1 174 3.7E-65 T 23-04-2016 CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 ProSitePatterns PS00501 Signal peptidases I serine active site. 34 41 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 PANTHER PTHR12383 1 174 3.7E-65 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLI_RS12190 d630176c034c50f28609be3cb93ab4f3 174 ProSitePatterns PS00760 Signal peptidases I lysine active site. 79 91 - T 23-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CLI_RS17225 81be0f7b52b3c92c24dab9b6f5115efc 398 SUPERFAMILY SSF53335 186 273 1.5E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS17225 81be0f7b52b3c92c24dab9b6f5115efc 398 Gene3D G3DSA:3.40.50.150 107 338 1.8E-63 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS17225 81be0f7b52b3c92c24dab9b6f5115efc 398 PANTHER PTHR23290 4 317 6.0E-180 T 23-04-2016 CLI_RS17225 81be0f7b52b3c92c24dab9b6f5115efc 398 Pfam PF01861 Protein of unknown function DUF43 114 307 6.1E-39 T 23-04-2016 IPR002723 N(4)-bis(aminopropyl)spermidine synthase, C-terminal CLI_RS17225 81be0f7b52b3c92c24dab9b6f5115efc 398 Gene3D G3DSA:1.10.10.10 4 82 5.3E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17225 81be0f7b52b3c92c24dab9b6f5115efc 398 PANTHER PTHR23290:SF0 4 317 6.0E-180 T 23-04-2016 CLI_RS03790 7fec27b6702a2fd639d27451c8c1c532 141 PANTHER PTHR11496 2 129 1.2E-34 T 23-04-2016 CLI_RS03790 7fec27b6702a2fd639d27451c8c1c532 141 PANTHER PTHR11496:SF65 2 129 1.2E-34 T 23-04-2016 CLI_RS03790 7fec27b6702a2fd639d27451c8c1c532 141 Pfam PF00465 Iron-containing alcohol dehydrogenase 4 131 4.4E-29 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 CLI_RS03790 7fec27b6702a2fd639d27451c8c1c532 141 Gene3D G3DSA:3.40.50.1970 3 61 3.5E-10 T 23-04-2016 CLI_RS03790 7fec27b6702a2fd639d27451c8c1c532 141 Gene3D G3DSA:1.20.1090.10 65 137 9.9E-20 T 23-04-2016 CLI_RS03790 7fec27b6702a2fd639d27451c8c1c532 141 SUPERFAMILY SSF56796 3 137 4.19E-32 T 23-04-2016 CLI_RS06495 f9732d3308c70a0be3e80d55699b7267 75 PANTHER PTHR34386 1 74 1.4E-16 T 23-04-2016 CLI_RS06495 f9732d3308c70a0be3e80d55699b7267 75 TIGRFAM TIGR02196 GlrX_YruB: glutaredoxin-like protein, YruB-family 1 74 5.8E-31 T 23-04-2016 IPR011911 Glutaredoxin-like protein, YruB CLI_RS06495 f9732d3308c70a0be3e80d55699b7267 75 SUPERFAMILY SSF52833 1 73 2.23E-19 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS06495 f9732d3308c70a0be3e80d55699b7267 75 Gene3D G3DSA:3.40.30.10 1 73 3.6E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS06495 f9732d3308c70a0be3e80d55699b7267 75 PANTHER PTHR34386:SF1 1 74 1.4E-16 T 23-04-2016 CLI_RS06495 f9732d3308c70a0be3e80d55699b7267 75 ProSitePatterns PS00195 Glutaredoxin active site. 4 20 - T 23-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 CLI_RS06495 f9732d3308c70a0be3e80d55699b7267 75 Pfam PF00462 Glutaredoxin 2 60 9.1E-18 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CLI_RS01350 376513f7b399062f148775470b8668bd 136 Gene3D G3DSA:3.10.28.10 2 132 1.2E-24 T 23-04-2016 IPR027434 Homing endonuclease GO:0004519 CLI_RS01350 376513f7b399062f148775470b8668bd 136 SUPERFAMILY SSF55608 2 108 1.4E-13 T 23-04-2016 IPR027434 Homing endonuclease GO:0004519 CLI_RS13460 7f2225e42d8fefa95f49693f8e78d396 227 PANTHER PTHR32309 1 227 2.4E-41 T 23-04-2016 CLI_RS13460 7f2225e42d8fefa95f49693f8e78d396 227 Pfam PF13807 G-rich domain on putative tyrosine kinase 155 197 4.0E-8 T 23-04-2016 IPR032807 Tyrosine kinase, G-rich domain CLI_RS13460 7f2225e42d8fefa95f49693f8e78d396 227 Pfam PF02706 Chain length determinant protein 6 138 3.8E-21 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 CLI_RS06225 9166db45506a16c3b35c27bd236e9bed 442 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 39 377 1.1E-50 T 23-04-2016 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain CLI_RS06225 9166db45506a16c3b35c27bd236e9bed 442 Gene3D G3DSA:2.60.40.1180 375 423 2.6E-11 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta CLI_RS06225 9166db45506a16c3b35c27bd236e9bed 442 PRINTS PR00843 Glycosyl hydrolase family 30 signature 65 91 4.5E-8 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 CLI_RS06225 9166db45506a16c3b35c27bd236e9bed 442 PRINTS PR00843 Glycosyl hydrolase family 30 signature 93 121 4.5E-8 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 CLI_RS06225 9166db45506a16c3b35c27bd236e9bed 442 PRINTS PR00843 Glycosyl hydrolase family 30 signature 160 177 4.5E-8 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 CLI_RS06225 9166db45506a16c3b35c27bd236e9bed 442 PRINTS PR00843 Glycosyl hydrolase family 30 signature 29 49 4.5E-8 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 CLI_RS06225 9166db45506a16c3b35c27bd236e9bed 442 PANTHER PTHR11069:SF12 10 442 9.5E-163 T 23-04-2016 CLI_RS06225 9166db45506a16c3b35c27bd236e9bed 442 SUPERFAMILY SSF51445 39 381 1.38E-72 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS06225 9166db45506a16c3b35c27bd236e9bed 442 PANTHER PTHR11069 10 442 9.5E-163 T 23-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 CLI_RS06225 9166db45506a16c3b35c27bd236e9bed 442 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 380 439 1.2E-11 T 23-04-2016 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain CLI_RS06225 9166db45506a16c3b35c27bd236e9bed 442 Gene3D G3DSA:3.20.20.80 34 374 6.6E-110 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS14270 5e5bea19aee13c381bebacee252b17a4 365 Gene3D G3DSA:3.40.140.10 6 129 1.7E-33 T 23-04-2016 CLI_RS14270 5e5bea19aee13c381bebacee252b17a4 365 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 1.1E-21 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CLI_RS14270 5e5bea19aee13c381bebacee252b17a4 365 PIRSF PIRSF006769 1 365 8.8E-139 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 CLI_RS14270 5e5bea19aee13c381bebacee252b17a4 365 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 359 3.3E-117 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 CLI_RS14270 5e5bea19aee13c381bebacee252b17a4 365 SUPERFAMILY SSF53597 148 363 1.46E-55 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CLI_RS14270 5e5bea19aee13c381bebacee252b17a4 365 SUPERFAMILY SSF53927 5 145 1.15E-44 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CLI_RS14270 5e5bea19aee13c381bebacee252b17a4 365 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLI_RS14270 5e5bea19aee13c381bebacee252b17a4 365 Gene3D G3DSA:3.40.430.10 130 364 6.5E-73 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CLI_RS14270 5e5bea19aee13c381bebacee252b17a4 365 Pfam PF01872 RibD C-terminal domain 148 359 2.2E-46 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CLI_RS14270 5e5bea19aee13c381bebacee252b17a4 365 PANTHER PTHR11079:SF10 1 210 2.1E-67 T 23-04-2016 CLI_RS14270 5e5bea19aee13c381bebacee252b17a4 365 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 363 6.5E-63 T 23-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CLI_RS14270 5e5bea19aee13c381bebacee252b17a4 365 PANTHER PTHR11079 1 210 2.1E-67 T 23-04-2016 CLI_RS15400 5763206c014cf4f90da022baa23e4ea3 324 PANTHER PTHR10587:SF78 96 324 4.2E-137 T 23-04-2016 CLI_RS15400 5763206c014cf4f90da022baa23e4ea3 324 Pfam PF01522 Polysaccharide deacetylase 128 252 5.1E-26 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS15400 5763206c014cf4f90da022baa23e4ea3 324 TIGRFAM TIGR02884 spore_pdaA: delta-lactam-biosynthetic de-N-acetylase 96 321 1.3E-102 T 23-04-2016 IPR014235 Delta-lactam-biosynthetic de-N-acetylase KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- CLI_RS15400 5763206c014cf4f90da022baa23e4ea3 324 Gene3D G3DSA:3.20.20.370 122 321 1.2E-58 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS15400 5763206c014cf4f90da022baa23e4ea3 324 PANTHER PTHR10587 96 324 4.2E-137 T 23-04-2016 CLI_RS15400 5763206c014cf4f90da022baa23e4ea3 324 SUPERFAMILY SSF88713 121 321 2.25E-58 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLI_RS14195 f5bb45ab43ecfadbb5b0a5c947a3ce39 277 SUPERFAMILY SSF50151 1 53 3.4E-16 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS14195 f5bb45ab43ecfadbb5b0a5c947a3ce39 277 SUPERFAMILY SSF63520 171 274 1.03E-26 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS14195 f5bb45ab43ecfadbb5b0a5c947a3ce39 277 Pfam PF00874 PRD domain 76 163 3.8E-23 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS14195 f5bb45ab43ecfadbb5b0a5c947a3ce39 277 Pfam PF00874 PRD domain 181 273 5.6E-19 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS14195 f5bb45ab43ecfadbb5b0a5c947a3ce39 277 PANTHER PTHR30185:SF2 1 277 2.6E-102 T 23-04-2016 CLI_RS14195 f5bb45ab43ecfadbb5b0a5c947a3ce39 277 Gene3D G3DSA:2.30.24.10 1 53 8.3E-21 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS14195 f5bb45ab43ecfadbb5b0a5c947a3ce39 277 Gene3D G3DSA:1.10.1790.10 170 276 3.0E-31 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS14195 f5bb45ab43ecfadbb5b0a5c947a3ce39 277 Gene3D G3DSA:1.10.1790.10 65 165 3.4E-31 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS14195 f5bb45ab43ecfadbb5b0a5c947a3ce39 277 Pfam PF03123 CAT RNA binding domain 1 56 2.7E-21 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS14195 f5bb45ab43ecfadbb5b0a5c947a3ce39 277 SMART SM01061 1 59 1.0E-26 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS14195 f5bb45ab43ecfadbb5b0a5c947a3ce39 277 PANTHER PTHR30185 1 277 2.6E-102 T 23-04-2016 CLI_RS14195 f5bb45ab43ecfadbb5b0a5c947a3ce39 277 SUPERFAMILY SSF63520 59 166 8.5E-31 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS01200 79f8d0ab79285615f90534742569907a 321 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 176 187 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS01200 79f8d0ab79285615f90534742569907a 321 PANTHER PTHR30002 1 302 7.5E-118 T 23-04-2016 CLI_RS01200 79f8d0ab79285615f90534742569907a 321 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 7 301 8.3E-76 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 CLI_RS01200 79f8d0ab79285615f90534742569907a 321 Pfam PF08331 Domain of unknown function (DUF1730) 54 123 2.4E-13 T 23-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 CLI_RS01200 79f8d0ab79285615f90534742569907a 321 PANTHER PTHR30002:SF4 1 302 7.5E-118 T 23-04-2016 CLI_RS01200 79f8d0ab79285615f90534742569907a 321 Pfam PF13484 4Fe-4S double cluster binding domain 175 234 1.6E-11 T 23-04-2016 CLI_RS01200 79f8d0ab79285615f90534742569907a 321 SUPERFAMILY SSF46548 122 236 6.8E-11 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS01200 79f8d0ab79285615f90534742569907a 321 Gene3D G3DSA:3.30.70.20 175 234 2.6E-5 T 23-04-2016 CLI_RS07550 c3eafcf80fbecfe9c55e8487cadc8756 243 Pfam PF05949 Bacterial protein of unknown function (DUF881) 91 237 5.0E-35 T 23-04-2016 IPR010273 Protein of unknown function DUF881 CLI_RS07550 c3eafcf80fbecfe9c55e8487cadc8756 243 PANTHER PTHR37313:SF2 1 243 3.3E-93 T 23-04-2016 CLI_RS07550 c3eafcf80fbecfe9c55e8487cadc8756 243 PANTHER PTHR37313 1 243 3.3E-93 T 23-04-2016 CLI_RS09780 e12fa6442eb941ac5d298a9239b60f5c 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 7.4E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS09780 e12fa6442eb941ac5d298a9239b60f5c 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 7.4E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS09780 e12fa6442eb941ac5d298a9239b60f5c 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 7.4E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS09780 e12fa6442eb941ac5d298a9239b60f5c 147 SMART SM00347 29 129 2.6E-17 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS09780 e12fa6442eb941ac5d298a9239b60f5c 147 SUPERFAMILY SSF46785 25 143 4.69E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09780 e12fa6442eb941ac5d298a9239b60f5c 147 Gene3D G3DSA:1.10.10.10 28 141 5.9E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09780 e12fa6442eb941ac5d298a9239b60f5c 147 PANTHER PTHR18964 1 143 6.6E-48 T 23-04-2016 CLI_RS09780 e12fa6442eb941ac5d298a9239b60f5c 147 Pfam PF01047 MarR family 38 93 5.4E-14 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS09780 e12fa6442eb941ac5d298a9239b60f5c 147 PANTHER PTHR18964:SF120 1 143 6.6E-48 T 23-04-2016 CLI_RS04315 962c2292044f0936daea5ff9156d72e7 258 PANTHER PTHR11649 20 190 2.9E-65 T 23-04-2016 CLI_RS04315 962c2292044f0936daea5ff9156d72e7 258 Pfam PF02421 Ferrous iron transport protein B 28 181 1.0E-60 T 23-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLI_RS04315 962c2292044f0936daea5ff9156d72e7 258 PANTHER PTHR11649:SF37 20 190 2.9E-65 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLI_RS04315 962c2292044f0936daea5ff9156d72e7 258 Gene3D G3DSA:3.40.50.300 22 192 1.7E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04315 962c2292044f0936daea5ff9156d72e7 258 SUPERFAMILY SSF52540 28 202 1.34E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15730 1b59d7c88eb940830673e4494bf7ab9d 330 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 328 2.4E-137 T 23-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS15730 1b59d7c88eb940830673e4494bf7ab9d 330 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 119 1.8E-35 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CLI_RS15730 1b59d7c88eb940830673e4494bf7ab9d 330 SMART SM00859 4 121 1.1E-44 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CLI_RS15730 1b59d7c88eb940830673e4494bf7ab9d 330 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 313 7.5E-50 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CLI_RS15730 1b59d7c88eb940830673e4494bf7ab9d 330 PANTHER PTHR10174 67 328 2.5E-77 T 23-04-2016 CLI_RS15730 1b59d7c88eb940830673e4494bf7ab9d 330 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 327 36.977 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS15730 1b59d7c88eb940830673e4494bf7ab9d 330 Gene3D G3DSA:3.40.50.720 1 142 9.2E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15730 1b59d7c88eb940830673e4494bf7ab9d 330 SUPERFAMILY SSF55347 129 314 2.88E-73 T 23-04-2016 CLI_RS15730 1b59d7c88eb940830673e4494bf7ab9d 330 PIRSF PIRSF000148 2 330 6.6E-126 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS15730 1b59d7c88eb940830673e4494bf7ab9d 330 SUPERFAMILY SSF51735 3 156 7.76E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15730 1b59d7c88eb940830673e4494bf7ab9d 330 PANTHER PTHR10174:SF2 67 328 2.5E-77 T 23-04-2016 CLI_RS15730 1b59d7c88eb940830673e4494bf7ab9d 330 Gene3D G3DSA:3.30.360.10 143 310 2.3E-73 T 23-04-2016 CLI_RS07985 52bc934e4eb3716641794909434b4c36 253 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 244 5.2E-30 T 23-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS07985 52bc934e4eb3716641794909434b4c36 253 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 4 244 3.0E-47 T 23-04-2016 IPR008275 CoA enzyme activase CLI_RS07985 52bc934e4eb3716641794909434b4c36 253 SUPERFAMILY SSF53067 4 247 1.08E-28 T 23-04-2016 CLI_RS07985 52bc934e4eb3716641794909434b4c36 253 PANTHER PTHR32329 1 253 2.7E-112 T 23-04-2016 CLI_RS07985 52bc934e4eb3716641794909434b4c36 253 Gene3D G3DSA:3.30.420.40 99 227 1.1E-36 T 23-04-2016 CLI_RS07985 52bc934e4eb3716641794909434b4c36 253 PANTHER PTHR32329:SF5 1 253 2.7E-112 T 23-04-2016 CLI_RS05715 1368ab35bbbb015937bdb4274cb0c742 209 Pfam PF13482 RNase_H superfamily 25 205 3.5E-43 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS05715 1368ab35bbbb015937bdb4274cb0c742 209 SUPERFAMILY SSF53098 23 205 4.1E-7 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS05715 1368ab35bbbb015937bdb4274cb0c742 209 Gene3D G3DSA:3.30.420.10 51 168 6.4E-5 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS18515 245b0ae14c786f155f08557288fe1f02 398 PANTHER PTHR10795 56 395 6.9E-44 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related CLI_RS18515 245b0ae14c786f155f08557288fe1f02 398 Gene3D G3DSA:3.40.50.200 97 397 2.2E-50 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLI_RS18515 245b0ae14c786f155f08557288fe1f02 398 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 127 3.9E-12 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related CLI_RS18515 245b0ae14c786f155f08557288fe1f02 398 PRINTS PR00723 Subtilisin serine protease family (S8) signature 148 161 3.9E-12 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related CLI_RS18515 245b0ae14c786f155f08557288fe1f02 398 PRINTS PR00723 Subtilisin serine protease family (S8) signature 340 356 3.9E-12 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related CLI_RS18515 245b0ae14c786f155f08557288fe1f02 398 SUPERFAMILY SSF52743 51 397 1.11E-53 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLI_RS18515 245b0ae14c786f155f08557288fe1f02 398 PANTHER PTHR10795:SF419 56 395 6.9E-44 T 23-04-2016 CLI_RS18515 245b0ae14c786f155f08557288fe1f02 398 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 152 162 - T 23-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site CLI_RS18515 245b0ae14c786f155f08557288fe1f02 398 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 113 123 - T 23-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site CLI_RS18515 245b0ae14c786f155f08557288fe1f02 398 Pfam PF00082 Subtilase family 108 362 1.9E-21 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLI_RS14700 428b867e1d1acba610e4d0ad31af86e3 114 PANTHER PTHR23089 2 114 1.7E-54 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CLI_RS14700 428b867e1d1acba610e4d0ad31af86e3 114 Pfam PF01230 HIT domain 11 108 6.3E-30 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CLI_RS14700 428b867e1d1acba610e4d0ad31af86e3 114 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 23-04-2016 IPR019808 Histidine triad, conserved site CLI_RS14700 428b867e1d1acba610e4d0ad31af86e3 114 PRINTS PR00332 Histidine triad family signature 26 44 2.3E-19 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CLI_RS14700 428b867e1d1acba610e4d0ad31af86e3 114 PRINTS PR00332 Histidine triad family signature 5 21 2.3E-19 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CLI_RS14700 428b867e1d1acba610e4d0ad31af86e3 114 PRINTS PR00332 Histidine triad family signature 94 104 2.3E-19 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CLI_RS14700 428b867e1d1acba610e4d0ad31af86e3 114 Gene3D G3DSA:3.30.428.10 1 114 1.1E-42 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CLI_RS14700 428b867e1d1acba610e4d0ad31af86e3 114 SUPERFAMILY SSF54197 1 113 1.84E-41 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CLI_RS09060 c4101fb54926211badbe14bd33257205 577 Gene3D G3DSA:3.40.50.1780 201 254 1.7E-79 T 23-04-2016 CLI_RS09060 c4101fb54926211badbe14bd33257205 577 Gene3D G3DSA:3.40.50.1780 306 436 1.7E-79 T 23-04-2016 CLI_RS09060 c4101fb54926211badbe14bd33257205 577 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 82 2.4E-18 T 23-04-2016 CLI_RS09060 c4101fb54926211badbe14bd33257205 577 Pfam PF13187 4Fe-4S dicluster domain 152 210 3.1E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS09060 c4101fb54926211badbe14bd33257205 577 SUPERFAMILY SSF53920 195 574 5.89E-136 T 23-04-2016 IPR009016 Iron hydrogenase CLI_RS09060 c4101fb54926211badbe14bd33257205 577 Pfam PF02256 Iron hydrogenase small subunit 523 576 2.4E-25 T 23-04-2016 IPR003149 Iron hydrogenase, small subunit CLI_RS09060 c4101fb54926211badbe14bd33257205 577 SUPERFAMILY SSF54862 82 220 6.7E-39 T 23-04-2016 CLI_RS09060 c4101fb54926211badbe14bd33257205 577 Gene3D G3DSA:3.30.70.20 138 200 3.2E-14 T 23-04-2016 CLI_RS09060 c4101fb54926211badbe14bd33257205 577 Gene3D G3DSA:3.10.20.30 2 65 2.3E-8 T 23-04-2016 IPR012675 Beta-grasp domain CLI_RS09060 c4101fb54926211badbe14bd33257205 577 SMART SM00929 90 130 1.1E-18 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 CLI_RS09060 c4101fb54926211badbe14bd33257205 577 SMART SM00902 519 576 1.9E-27 T 23-04-2016 IPR003149 Iron hydrogenase, small subunit CLI_RS09060 c4101fb54926211badbe14bd33257205 577 SUPERFAMILY SSF54292 3 90 4.99E-16 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLI_RS09060 c4101fb54926211badbe14bd33257205 577 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 145 517 9.6E-164 T 23-04-2016 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 CLI_RS09060 c4101fb54926211badbe14bd33257205 577 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 90 127 2.2E-17 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 CLI_RS09060 c4101fb54926211badbe14bd33257205 577 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 229 513 2.5E-100 T 23-04-2016 IPR004108 Iron hydrogenase, large subunit, C-terminal CLI_RS09060 c4101fb54926211badbe14bd33257205 577 PANTHER PTHR11615:SF112 5 577 1.1E-197 T 23-04-2016 CLI_RS09060 c4101fb54926211badbe14bd33257205 577 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 196 207 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS09060 c4101fb54926211badbe14bd33257205 577 PANTHER PTHR11615 5 577 1.1E-197 T 23-04-2016 CLI_RS09060 c4101fb54926211badbe14bd33257205 577 Gene3D G3DSA:4.10.260.20 521 577 2.1E-25 T 23-04-2016 IPR003149 Iron hydrogenase, small subunit CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 SUPERFAMILY SSF55073 261 418 4.47E-47 T 23-04-2016 IPR029787 Nucleotide cyclase CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 416 1.0E-45 T 23-04-2016 IPR000160 GGDEF domain CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 Pfam PF13426 PAS domain 149 244 6.3E-10 T 23-04-2016 IPR000014 PAS domain CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 Pfam PF13426 PAS domain 39 125 0.029 T 23-04-2016 IPR000014 PAS domain CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 Gene3D G3DSA:3.30.70.270 257 418 5.3E-54 T 23-04-2016 CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 PANTHER PTHR10799:SF774 65 216 1.3E-40 T 23-04-2016 CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 PANTHER PTHR10799:SF774 289 412 1.3E-40 T 23-04-2016 CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 SMART SM00267 245 417 8.0E-56 T 23-04-2016 IPR000160 GGDEF domain CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 SUPERFAMILY SSF55785 123 243 5.23E-18 T 23-04-2016 IPR000014 PAS domain CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 PANTHER PTHR10799 65 216 1.3E-40 T 23-04-2016 CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 PANTHER PTHR10799 289 412 1.3E-40 T 23-04-2016 CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 SMART SM00091 138 204 2.3E-6 T 23-04-2016 IPR000014 PAS domain CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 Gene3D G3DSA:3.30.450.20 122 243 2.2E-15 T 23-04-2016 CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 Pfam PF00990 Diguanylate cyclase, GGDEF domain 256 413 2.7E-50 T 23-04-2016 IPR000160 GGDEF domain CLI_RS06290 7a135d385d4d85e6e971aaf458b5f31d 419 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 138 248 8.1E-18 T 23-04-2016 IPR000014 PAS domain CLI_RS05300 7c960f0888b159902ed0eedd3bcfeb08 394 SUPERFAMILY SSF53383 25 392 1.73E-85 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS05300 7c960f0888b159902ed0eedd3bcfeb08 394 PANTHER PTHR11751:SF429 11 390 3.1E-139 T 23-04-2016 CLI_RS05300 7c960f0888b159902ed0eedd3bcfeb08 394 Pfam PF00155 Aminotransferase class I and II 35 381 5.7E-53 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS05300 7c960f0888b159902ed0eedd3bcfeb08 394 Gene3D G3DSA:3.40.640.10 48 248 5.8E-56 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS05300 7c960f0888b159902ed0eedd3bcfeb08 394 Gene3D G3DSA:3.90.1150.10 249 393 3.5E-31 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS05300 7c960f0888b159902ed0eedd3bcfeb08 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 242 255 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 CLI_RS05300 7c960f0888b159902ed0eedd3bcfeb08 394 PANTHER PTHR11751 11 390 3.1E-139 T 23-04-2016 CLI_RS05300 7c960f0888b159902ed0eedd3bcfeb08 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 167 191 2.3E-11 T 23-04-2016 CLI_RS05300 7c960f0888b159902ed0eedd3bcfeb08 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 236 260 2.3E-11 T 23-04-2016 CLI_RS05300 7c960f0888b159902ed0eedd3bcfeb08 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 99 119 2.3E-11 T 23-04-2016 CLI_RS05300 7c960f0888b159902ed0eedd3bcfeb08 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 121 142 2.3E-11 T 23-04-2016 CLI_RS12620 5e8301497c7fbe6a9b48e9f0f7f1e6f5 444 PANTHER PTHR22939:SF75 5 236 8.4E-59 T 23-04-2016 CLI_RS12620 5e8301497c7fbe6a9b48e9f0f7f1e6f5 444 Pfam PF04459 Protein of unknown function (DUF512) 219 427 7.0E-71 T 23-04-2016 IPR007549 Domain of unknown function DUF512 CLI_RS12620 5e8301497c7fbe6a9b48e9f0f7f1e6f5 444 PANTHER PTHR22939 5 236 8.4E-59 T 23-04-2016 CLI_RS12620 5e8301497c7fbe6a9b48e9f0f7f1e6f5 444 SUPERFAMILY SSF50156 5 91 3.02E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS12620 5e8301497c7fbe6a9b48e9f0f7f1e6f5 444 SUPERFAMILY SSF102114 79 228 2.94E-10 T 23-04-2016 CLI_RS12620 5e8301497c7fbe6a9b48e9f0f7f1e6f5 444 Gene3D G3DSA:2.30.42.10 5 67 6.3E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS12620 5e8301497c7fbe6a9b48e9f0f7f1e6f5 444 Gene3D G3DSA:3.80.30.10 128 251 2.5E-7 T 23-04-2016 CLI_RS08720 93f9186c6bf2e44706d907dbd6794e07 452 PANTHER PTHR32089 7 452 2.4E-241 T 23-04-2016 CLI_RS08720 93f9186c6bf2e44706d907dbd6794e07 452 PANTHER PTHR32089:SF32 7 452 2.4E-241 T 23-04-2016 CLI_RS08720 93f9186c6bf2e44706d907dbd6794e07 452 Pfam PF07670 Nucleoside recognition 139 234 2.7E-7 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS12710 4df77bca30b3111122aa5bb895511e13 358 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 12 349 3.0E-142 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CLI_RS12710 4df77bca30b3111122aa5bb895511e13 358 SUPERFAMILY SSF52540 11 344 2.88E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12710 4df77bca30b3111122aa5bb895511e13 358 PANTHER PTHR30486 11 357 1.3E-163 T 23-04-2016 CLI_RS12710 4df77bca30b3111122aa5bb895511e13 358 Gene3D G3DSA:3.40.50.300 109 346 3.7E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12710 4df77bca30b3111122aa5bb895511e13 358 PANTHER PTHR30486:SF5 11 357 1.3E-163 T 23-04-2016 CLI_RS12710 4df77bca30b3111122aa5bb895511e13 358 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 201 215 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CLI_RS12710 4df77bca30b3111122aa5bb895511e13 358 Pfam PF00437 Type II/IV secretion system protein 118 277 3.0E-41 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CLI_RS12710 4df77bca30b3111122aa5bb895511e13 358 SMART SM00382 130 255 4.0E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 Gene3D G3DSA:3.40.50.720 1 165 5.4E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 Pfam PF02056 Family 4 glycosyl hydrolase 6 184 2.8E-66 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 PANTHER PTHR32092:SF7 1 441 0.0 T 23-04-2016 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 SUPERFAMILY SSF56327 168 441 1.43E-96 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 416 2.3E-53 T 23-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 SUPERFAMILY SSF51735 3 164 3.94E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 1.5E-56 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 1.5E-56 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 1.5E-56 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 1.5E-56 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 1.5E-56 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 1.5E-56 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 1.5E-56 T 23-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 138 169 - T 23-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 Gene3D G3DSA:3.90.110.10 167 440 5.3E-103 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CLI_RS01610 9f48432d345104bd0a81432f8171f5f1 441 PANTHER PTHR32092 1 441 0.0 T 23-04-2016 CLI_RS13290 cbd2e762546abc240de98a42b6ca36a8 69 PANTHER PTHR39185 2 69 1.8E-28 T 23-04-2016 CLI_RS13290 cbd2e762546abc240de98a42b6ca36a8 69 Pfam PF06289 Flagellar protein (FlbD) 1 58 6.0E-25 T 23-04-2016 IPR009384 Flagellar CLI_RS09100 848f2c9e75c1f2ef5f1d8a1c343163f4 146 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 4 126 5.7E-63 T 23-04-2016 IPR014229 Sporulation protein YtfJ CLI_RS09100 848f2c9e75c1f2ef5f1d8a1c343163f4 146 PANTHER PTHR39162 2 146 6.5E-46 T 23-04-2016 CLI_RS09100 848f2c9e75c1f2ef5f1d8a1c343163f4 146 PANTHER PTHR39162:SF1 2 146 6.5E-46 T 23-04-2016 CLI_RS09100 848f2c9e75c1f2ef5f1d8a1c343163f4 146 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 33 116 3.6E-32 T 23-04-2016 IPR014229 Sporulation protein YtfJ CLI_RS09100 848f2c9e75c1f2ef5f1d8a1c343163f4 146 PIRSF PIRSF021377 1 146 5.1E-64 T 23-04-2016 IPR014229 Sporulation protein YtfJ CLI_RS03165 116013c175be12cc66d14b6bdee7ba83 226 SMART SM00382 32 220 7.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03165 116013c175be12cc66d14b6bdee7ba83 226 PANTHER PTHR24220:SF580 5 221 8.4E-120 T 23-04-2016 CLI_RS03165 116013c175be12cc66d14b6bdee7ba83 226 PANTHER PTHR24220 5 221 8.4E-120 T 23-04-2016 CLI_RS03165 116013c175be12cc66d14b6bdee7ba83 226 SUPERFAMILY SSF52540 3 221 2.1E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03165 116013c175be12cc66d14b6bdee7ba83 226 Gene3D G3DSA:3.40.50.300 2 221 1.3E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03165 116013c175be12cc66d14b6bdee7ba83 226 Pfam PF00005 ABC transporter 23 171 3.7E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03165 116013c175be12cc66d14b6bdee7ba83 226 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS00535 0cae7d85566f21351e6360d81fa3d6df 278 SMART SM00650 31 203 4.4E-79 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CLI_RS00535 0cae7d85566f21351e6360d81fa3d6df 278 Gene3D G3DSA:3.40.50.150 5 203 9.8E-73 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS00535 0cae7d85566f21351e6360d81fa3d6df 278 Gene3D G3DSA:1.10.8.100 207 276 1.3E-24 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like CLI_RS00535 0cae7d85566f21351e6360d81fa3d6df 278 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 15 275 54.933 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CLI_RS00535 0cae7d85566f21351e6360d81fa3d6df 278 Pfam PF00398 Ribosomal RNA adenine dimethylase 15 273 5.6E-69 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CLI_RS00535 0cae7d85566f21351e6360d81fa3d6df 278 SUPERFAMILY SSF53335 12 276 8.51E-77 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS00535 0cae7d85566f21351e6360d81fa3d6df 278 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 47 74 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CLI_RS00535 0cae7d85566f21351e6360d81fa3d6df 278 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 15 272 4.5E-86 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CLI_RS00535 0cae7d85566f21351e6360d81fa3d6df 278 PANTHER PTHR11727 6 277 2.6E-97 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CLI_RS01495 814daa1c9af2ee3666fac23d1929ec55 309 PANTHER PTHR30231 1 268 2.7E-98 T 23-04-2016 CLI_RS01495 814daa1c9af2ee3666fac23d1929ec55 309 Pfam PF00929 Exonuclease 4 156 8.1E-22 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS01495 814daa1c9af2ee3666fac23d1929ec55 309 SUPERFAMILY SSF52113 218 306 1.31E-9 T 23-04-2016 IPR001357 BRCT domain CLI_RS01495 814daa1c9af2ee3666fac23d1929ec55 309 Gene3D G3DSA:3.30.420.10 1 171 1.7E-41 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS01495 814daa1c9af2ee3666fac23d1929ec55 309 PANTHER PTHR30231:SF10 1 268 2.7E-98 T 23-04-2016 CLI_RS01495 814daa1c9af2ee3666fac23d1929ec55 309 SUPERFAMILY SSF53098 1 174 1.67E-39 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS01495 814daa1c9af2ee3666fac23d1929ec55 309 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 221 290 2.0E-7 T 23-04-2016 IPR001357 BRCT domain CLI_RS01495 814daa1c9af2ee3666fac23d1929ec55 309 Gene3D G3DSA:3.40.50.10190 221 307 1.1E-13 T 23-04-2016 IPR001357 BRCT domain CLI_RS01495 814daa1c9af2ee3666fac23d1929ec55 309 SMART SM00479 2 166 3.7E-12 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS13060 834a92d7962651f03c7dc5298452c219 245 PANTHER PTHR12677 3 233 5.0E-154 T 23-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 CLI_RS13060 834a92d7962651f03c7dc5298452c219 245 Pfam PF09335 SNARE associated Golgi protein 76 193 5.6E-28 T 23-04-2016 IPR032816 SNARE associated Golgi protein CLI_RS13060 834a92d7962651f03c7dc5298452c219 245 PANTHER PTHR12677:SF20 3 233 5.0E-154 T 23-04-2016 CLI_RS14255 8b0d8b23305c5b09f6361063d1b75dae 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 151 1.3E-61 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14255 8b0d8b23305c5b09f6361063d1b75dae 154 SUPERFAMILY SSF52121 3 153 2.09E-64 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14255 8b0d8b23305c5b09f6361063d1b75dae 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 149 6.3E-61 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14255 8b0d8b23305c5b09f6361063d1b75dae 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 31.952 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14255 8b0d8b23305c5b09f6361063d1b75dae 154 PANTHER PTHR21058 1 154 1.1E-84 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14255 8b0d8b23305c5b09f6361063d1b75dae 154 Gene3D G3DSA:3.40.50.960 3 153 4.1E-70 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14015 f9f65ca20b83fe0a06cbce78bd0bd234 411 SUPERFAMILY SSF54862 128 145 8.37E-21 T 23-04-2016 CLI_RS14015 f9f65ca20b83fe0a06cbce78bd0bd234 411 SUPERFAMILY SSF54862 310 400 8.37E-21 T 23-04-2016 CLI_RS14015 f9f65ca20b83fe0a06cbce78bd0bd234 411 Pfam PF01180 Dihydroorotate dehydrogenase 6 302 7.7E-32 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CLI_RS14015 f9f65ca20b83fe0a06cbce78bd0bd234 411 Gene3D G3DSA:3.20.20.70 3 320 2.6E-71 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS14015 f9f65ca20b83fe0a06cbce78bd0bd234 411 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS14015 f9f65ca20b83fe0a06cbce78bd0bd234 411 Gene3D G3DSA:3.30.70.20 325 403 2.3E-16 T 23-04-2016 CLI_RS14015 f9f65ca20b83fe0a06cbce78bd0bd234 411 PANTHER PTHR11938:SF102 4 393 1.0E-270 T 23-04-2016 CLI_RS14015 f9f65ca20b83fe0a06cbce78bd0bd234 411 Pfam PF14697 4Fe-4S dicluster domain 339 394 2.8E-19 T 23-04-2016 CLI_RS14015 f9f65ca20b83fe0a06cbce78bd0bd234 411 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 319 7.4E-58 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CLI_RS14015 f9f65ca20b83fe0a06cbce78bd0bd234 411 PANTHER PTHR11938 4 393 1.0E-270 T 23-04-2016 CLI_RS14015 f9f65ca20b83fe0a06cbce78bd0bd234 411 SUPERFAMILY SSF51395 4 320 8.66E-65 T 23-04-2016 CLI_RS10670 ea4d3f758ec25ff78cdfda90993a8979 162 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 5 53 4.0E-11 T 23-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 CLI_RS10670 ea4d3f758ec25ff78cdfda90993a8979 162 Gene3D G3DSA:1.10.10.10 9 63 6.9E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10670 ea4d3f758ec25ff78cdfda90993a8979 162 Pfam PF12728 Helix-turn-helix domain 5 54 1.4E-11 T 23-04-2016 CLI_RS10670 ea4d3f758ec25ff78cdfda90993a8979 162 SUPERFAMILY SSF46955 5 54 2.81E-6 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 Pfam PF00690 Cation transporter/ATPase, N-terminus 25 90 3.4E-18 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 Pfam PF00122 E1-E2 ATPase 110 344 6.0E-56 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 113 207 2.6E-18 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 246 388 4.6E-20 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 587 710 3.2E-32 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 Gene3D G3DSA:2.70.150.10 34 74 2.8E-43 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 Gene3D G3DSA:2.70.150.10 137 254 2.8E-43 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 Gene3D G3DSA:3.40.1110.10 345 528 1.1E-38 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 SUPERFAMILY SSF81665 254 347 5.62E-104 T 23-04-2016 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 SUPERFAMILY SSF81665 670 878 5.62E-104 T 23-04-2016 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 SUPERFAMILY SSF81665 22 142 5.62E-104 T 23-04-2016 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 PANTHER PTHR24093 5 880 0.0 T 23-04-2016 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 PANTHER PTHR24093:SF128 5 880 0.0 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 SUPERFAMILY SSF56784 341 365 4.13E-40 T 23-04-2016 IPR023214 HAD-like domain CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 SUPERFAMILY SSF56784 519 661 4.13E-40 T 23-04-2016 IPR023214 HAD-like domain CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 SUPERFAMILY SSF56784 399 416 4.13E-40 T 23-04-2016 IPR023214 HAD-like domain CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 SUPERFAMILY SSF81660 320 525 6.76E-41 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 SUPERFAMILY SSF81653 144 252 1.57E-27 T 23-04-2016 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 SMART SM00831 22 95 3.7E-15 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 13 880 0.0 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 355 361 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 Pfam PF00702 haloacid dehalogenase-like hydrolase 349 635 2.6E-20 T 23-04-2016 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 Gene3D G3DSA:1.20.1110.10 75 136 3.6E-67 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 Gene3D G3DSA:1.20.1110.10 590 872 3.6E-67 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 PRINTS PR01836 Magnesium-transporting ATPase signature 679 694 1.6E-79 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 PRINTS PR01836 Magnesium-transporting ATPase signature 729 742 1.6E-79 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 PRINTS PR01836 Magnesium-transporting ATPase signature 697 708 1.6E-79 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 PRINTS PR01836 Magnesium-transporting ATPase signature 283 302 1.6E-79 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 PRINTS PR01836 Magnesium-transporting ATPase signature 266 282 1.6E-79 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 PRINTS PR01836 Magnesium-transporting ATPase signature 387 400 1.6E-79 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 PRINTS PR01836 Magnesium-transporting ATPase signature 749 765 1.6E-79 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 PRINTS PR01836 Magnesium-transporting ATPase signature 834 855 1.6E-79 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CLI_RS14285 ee2f2925450f7e5e1ff3b78044135450 881 PRINTS PR01836 Magnesium-transporting ATPase signature 784 805 1.6E-79 T 23-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CLI_RS14095 92155580caf6270418dd24f238f7983f 380 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 3 375 2.1E-114 T 23-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CLI_RS14095 92155580caf6270418dd24f238f7983f 380 Gene3D G3DSA:3.20.20.140 60 336 3.1E-102 T 23-04-2016 CLI_RS14095 92155580caf6270418dd24f238f7983f 380 SUPERFAMILY SSF51338 348 379 2.25E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS14095 92155580caf6270418dd24f238f7983f 380 SUPERFAMILY SSF51338 2 54 2.25E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS14095 92155580caf6270418dd24f238f7983f 380 PANTHER PTHR11113:SF7 1 377 5.6E-172 T 23-04-2016 CLI_RS14095 92155580caf6270418dd24f238f7983f 380 PIRSF PIRSF038994 1 380 1.3E-130 T 23-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CLI_RS14095 92155580caf6270418dd24f238f7983f 380 Gene3D G3DSA:2.30.40.10 3 59 9.8E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS14095 92155580caf6270418dd24f238f7983f 380 SUPERFAMILY SSF51556 55 348 3.74E-93 T 23-04-2016 IPR032466 Metal-dependent hydrolase CLI_RS14095 92155580caf6270418dd24f238f7983f 380 PANTHER PTHR11113 1 377 5.6E-172 T 23-04-2016 CLI_RS14095 92155580caf6270418dd24f238f7983f 380 Gene3D G3DSA:2.30.40.10 337 379 8.6E-11 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS14095 92155580caf6270418dd24f238f7983f 380 Pfam PF01979 Amidohydrolase family 51 377 2.3E-31 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CLI_RS05540 0dba20305a63e02ded2df824957fcdcc 235 PANTHER PTHR26402:SF577 2 230 1.2E-56 T 23-04-2016 CLI_RS05540 0dba20305a63e02ded2df824957fcdcc 235 Gene3D G3DSA:3.40.50.2300 1 120 3.6E-21 T 23-04-2016 CLI_RS05540 0dba20305a63e02ded2df824957fcdcc 235 SMART SM00448 2 115 8.7E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS05540 0dba20305a63e02ded2df824957fcdcc 235 PANTHER PTHR26402 2 230 1.2E-56 T 23-04-2016 CLI_RS05540 0dba20305a63e02ded2df824957fcdcc 235 Gene3D G3DSA:2.40.50.40 126 195 2.2E-21 T 23-04-2016 CLI_RS05540 0dba20305a63e02ded2df824957fcdcc 235 SUPERFAMILY SSF52172 1 126 2.7E-18 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS05540 0dba20305a63e02ded2df824957fcdcc 235 Pfam PF00072 Response regulator receiver domain 5 114 1.0E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS05540 0dba20305a63e02ded2df824957fcdcc 235 Pfam PF04397 LytTr DNA-binding domain 138 226 3.9E-22 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 CLI_RS05540 0dba20305a63e02ded2df824957fcdcc 235 SMART SM00850 135 227 6.8E-25 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 CLI_RS13130 4263f4b838fe311cade8f65c276d0f26 216 PANTHER PTHR11671 1 216 3.2E-117 T 23-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 CLI_RS13130 4263f4b838fe311cade8f65c276d0f26 216 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 4 210 6.5E-53 T 23-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 CLI_RS13130 4263f4b838fe311cade8f65c276d0f26 216 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 2 211 22.294 T 23-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 CLI_RS13130 4263f4b838fe311cade8f65c276d0f26 216 PANTHER PTHR11671:SF2 1 216 3.2E-117 T 23-04-2016 CLI_RS13130 4263f4b838fe311cade8f65c276d0f26 216 Pfam PF01813 ATP synthase subunit D 11 205 1.2E-60 T 23-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 9.2E-8 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.898 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 9.7E-22 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 SMART SM00478 38 185 3.7E-59 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 SUPERFAMILY SSF48150 4 209 2.2E-72 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.2E-4 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 Gene3D G3DSA:1.10.1670.10 123 209 8.3E-37 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 PIRSF PIRSF001435 2 212 1.7E-61 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.3E-83 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 PANTHER PTHR10359 18 211 6.8E-84 T 23-04-2016 CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 SMART SM00525 186 206 0.0068 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 CLI_RS01210 933f0549c292e0414cb254c90ec0dd3e 213 Gene3D G3DSA:1.10.340.30 22 122 1.1E-36 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CLI_RS06315 0a8e03b8236135a375fa94df5739fea6 194 PANTHER PTHR35134 1 194 2.8E-110 T 23-04-2016 CLI_RS06315 0a8e03b8236135a375fa94df5739fea6 194 PANTHER PTHR35134:SF1 1 194 2.8E-110 T 23-04-2016 CLI_RS06315 0a8e03b8236135a375fa94df5739fea6 194 PIRSF PIRSF021362 3 193 5.0E-62 T 23-04-2016 IPR009206 Nucleotidase, putative KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- CLI_RS06315 0a8e03b8236135a375fa94df5739fea6 194 SUPERFAMILY SSF56784 63 164 5.17E-19 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06315 0a8e03b8236135a375fa94df5739fea6 194 SUPERFAMILY SSF56784 5 17 5.17E-19 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06315 0a8e03b8236135a375fa94df5739fea6 194 Gene3D G3DSA:3.40.50.1000 52 185 3.2E-15 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06315 0a8e03b8236135a375fa94df5739fea6 194 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 6 184 6.1E-16 T 23-04-2016 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.-|Reactome: REACT_1698 CLI_RS11940 3faefa8ac4c15ae45b5242232807b1b5 420 Gene3D G3DSA:3.50.50.60 5 183 1.5E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS11940 3faefa8ac4c15ae45b5242232807b1b5 420 Gene3D G3DSA:3.50.50.60 297 347 1.5E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS11940 3faefa8ac4c15ae45b5242232807b1b5 420 Gene3D G3DSA:3.50.50.60 247 265 1.5E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS11940 3faefa8ac4c15ae45b5242232807b1b5 420 Pfam PF01134 Glucose inhibited division protein A 6 214 5.5E-21 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 CLI_RS11940 3faefa8ac4c15ae45b5242232807b1b5 420 Pfam PF01134 Glucose inhibited division protein A 259 346 1.8E-13 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 CLI_RS11940 3faefa8ac4c15ae45b5242232807b1b5 420 SUPERFAMILY SSF51905 6 164 6.49E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS11940 3faefa8ac4c15ae45b5242232807b1b5 420 SUPERFAMILY SSF51905 292 342 6.49E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS16765 5b88f54f833796893890edbe942658ac 667 Pfam PF07495 Y_Y_Y domain 313 377 4.9E-8 T 23-04-2016 IPR011123 Two component regulator three Y CLI_RS16765 5b88f54f833796893890edbe942658ac 667 Pfam PF07495 Y_Y_Y domain 126 185 1.4E-6 T 23-04-2016 IPR011123 Two component regulator three Y CLI_RS16765 5b88f54f833796893890edbe942658ac 667 Pfam PF07495 Y_Y_Y domain 217 284 5.6E-12 T 23-04-2016 IPR011123 Two component regulator three Y CLI_RS16765 5b88f54f833796893890edbe942658ac 667 Pfam PF07495 Y_Y_Y domain 412 469 1.1E-8 T 23-04-2016 IPR011123 Two component regulator three Y CLI_RS16765 5b88f54f833796893890edbe942658ac 667 Pfam PF07495 Y_Y_Y domain 27 91 3.2E-10 T 23-04-2016 IPR011123 Two component regulator three Y CLI_RS16765 5b88f54f833796893890edbe942658ac 667 Pfam PF07495 Y_Y_Y domain 508 572 8.0E-10 T 23-04-2016 IPR011123 Two component regulator three Y CLI_RS11465 f2b1efe064980da29aa4a3d4c0de98be 150 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 10 146 1.3E-42 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS11465 f2b1efe064980da29aa4a3d4c0de98be 150 PRINTS PR01576 Peptide deformylase signature 99 117 1.4E-26 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS11465 f2b1efe064980da29aa4a3d4c0de98be 150 PRINTS PR01576 Peptide deformylase signature 34 63 1.4E-26 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS11465 f2b1efe064980da29aa4a3d4c0de98be 150 PRINTS PR01576 Peptide deformylase signature 87 98 1.4E-26 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS11465 f2b1efe064980da29aa4a3d4c0de98be 150 PRINTS PR01576 Peptide deformylase signature 118 147 1.4E-26 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS11465 f2b1efe064980da29aa4a3d4c0de98be 150 Hamap MF_00163 Peptide deformylase [def]. 2 149 25.453 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS11465 f2b1efe064980da29aa4a3d4c0de98be 150 Gene3D G3DSA:3.90.45.10 1 145 3.2E-49 T 23-04-2016 IPR023635 Peptide deformylase CLI_RS11465 f2b1efe064980da29aa4a3d4c0de98be 150 PANTHER PTHR10458 1 143 2.0E-55 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS11465 f2b1efe064980da29aa4a3d4c0de98be 150 Pfam PF01327 Polypeptide deformylase 4 145 2.0E-43 T 23-04-2016 IPR023635 Peptide deformylase CLI_RS11465 f2b1efe064980da29aa4a3d4c0de98be 150 SUPERFAMILY SSF56420 3 146 1.11E-48 T 23-04-2016 IPR023635 Peptide deformylase CLI_RS11465 f2b1efe064980da29aa4a3d4c0de98be 150 PIRSF PIRSF004749 1 148 2.9E-44 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS10570 1149dcfca8fdd98a6739b85f0cab2ef4 117 PIRSF PIRSF012296 3 117 2.1E-53 T 23-04-2016 IPR009307 Ethanolamine utilisation EutS GO:0006580 CLI_RS10570 1149dcfca8fdd98a6739b85f0cab2ef4 117 Pfam PF00936 BMC domain 46 106 1.8E-15 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS10570 1149dcfca8fdd98a6739b85f0cab2ef4 117 SUPERFAMILY SSF143414 45 109 1.83E-15 T 23-04-2016 CLI_RS10570 1149dcfca8fdd98a6739b85f0cab2ef4 117 PANTHER PTHR40449:SF2 2 117 1.0E-77 T 23-04-2016 CLI_RS10570 1149dcfca8fdd98a6739b85f0cab2ef4 117 PANTHER PTHR40449 2 117 1.0E-77 T 23-04-2016 CLI_RS10570 1149dcfca8fdd98a6739b85f0cab2ef4 117 SMART SM00877 45 117 3.3E-21 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 322 2.8E-75 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 3.8E-35 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 3.8E-35 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 3.8E-35 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 3.8E-35 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 3.8E-35 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 Gene3D G3DSA:3.30.390.30 329 459 3.1E-52 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 450 4.9E-39 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 35 45 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PANTHER PTHR22912 1 453 1.1E-212 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 SUPERFAMILY SSF55424 337 460 2.23E-43 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 Gene3D G3DSA:3.50.50.60 1 142 1.4E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PIRSF PIRSF000350 1 461 2.3E-106 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 2 460 1.9E-184 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 SUPERFAMILY SSF51905 1 316 1.4E-67 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 4.3E-72 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 4.3E-72 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 34 49 4.3E-72 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 358 4.3E-72 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 4.3E-72 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 4.3E-72 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 4.3E-72 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 4.3E-72 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 4.3E-72 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 PANTHER PTHR22912:SF125 1 453 1.1E-212 T 23-04-2016 CLI_RS08380 3c6dd43c5bb6e86a1e298f2435c9841c 463 Gene3D G3DSA:3.50.50.60 143 328 1.4E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS16825 ce3199889154088d3570e453e14ec824 377 PANTHER PTHR10909 1 377 1.6E-171 T 23-04-2016 CLI_RS16825 ce3199889154088d3570e453e14ec824 377 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLI_RS16825 ce3199889154088d3570e453e14ec824 377 SUPERFAMILY SSF47203 225 377 2.9E-61 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLI_RS16825 ce3199889154088d3570e453e14ec824 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 3.6E-55 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLI_RS16825 ce3199889154088d3570e453e14ec824 377 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLI_RS16825 ce3199889154088d3570e453e14ec824 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 1.1E-35 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CLI_RS16825 ce3199889154088d3570e453e14ec824 377 Gene3D G3DSA:1.20.140.10 216 377 1.3E-70 T 23-04-2016 CLI_RS16825 ce3199889154088d3570e453e14ec824 377 SUPERFAMILY SSF56645 2 238 1.16E-79 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CLI_RS16825 ce3199889154088d3570e453e14ec824 377 Gene3D G3DSA:1.10.540.10 3 117 2.0E-39 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CLI_RS16825 ce3199889154088d3570e453e14ec824 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 1.7E-27 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CLI_RS16825 ce3199889154088d3570e453e14ec824 377 PANTHER PTHR10909:SF305 1 377 1.6E-171 T 23-04-2016 CLI_RS16825 ce3199889154088d3570e453e14ec824 377 Gene3D G3DSA:2.40.110.10 120 215 3.2E-36 T 23-04-2016 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 299 3.3E-131 T 23-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 PANTHER PTHR13697:SF4 1 310 3.4E-138 T 23-04-2016 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 SUPERFAMILY SSF53784 2 316 1.7E-116 T 23-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 Gene3D G3DSA:3.40.50.450 2 208 3.3E-75 T 23-04-2016 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 48.094 T 23-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 Pfam PF00365 Phosphofructokinase 4 275 1.1E-109 T 23-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 1.21E-84 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.21E-84 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 1.21E-84 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 1.21E-84 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 1.21E-84 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 1.21E-84 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 1.21E-84 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 1.21E-84 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 1.21E-84 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 PIRSF PIRSF000532 1 318 5.6E-121 T 23-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 PANTHER PTHR13697 1 310 3.4E-138 T 23-04-2016 CLI_RS17305 c07a881e1b071bdb01f7d402c21a5120 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 23-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CLI_RS07395 85b1975d072a6c4f1ce57a22f6646172 535 PANTHER PTHR30250 1 523 2.1E-196 T 23-04-2016 CLI_RS07395 85b1975d072a6c4f1ce57a22f6646172 535 PIRSF PIRSF038958 1 525 4.4E-101 T 23-04-2016 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type CLI_RS07395 85b1975d072a6c4f1ce57a22f6646172 535 PANTHER PTHR30250:SF6 1 523 2.1E-196 T 23-04-2016 CLI_RS07395 85b1975d072a6c4f1ce57a22f6646172 535 Pfam PF01943 Polysaccharide biosynthesis protein 7 305 3.9E-28 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLI_RS07395 85b1975d072a6c4f1ce57a22f6646172 535 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 358 508 4.3E-20 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 SUPERFAMILY SSF54211 477 593 2.25E-43 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 TIGRFAM TIGR00484 EF-G: translation elongation factor G 5 679 1.8E-216 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 SUPERFAMILY SSF50447 261 399 6.25E-29 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 PANTHER PTHR23115 1 175 0.0 T 23-04-2016 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 PANTHER PTHR23115 250 278 0.0 T 23-04-2016 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 PANTHER PTHR23115 298 687 0.0 T 23-04-2016 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 Gene3D G3DSA:3.30.230.10 479 592 4.9E-48 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 SMART SM00838 594 682 8.3E-32 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 Gene3D G3DSA:3.40.50.300 4 282 2.9E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 PRINTS PR00315 GTP-binding elongation factor signature 92 103 2.6E-7 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 PRINTS PR00315 GTP-binding elongation factor signature 76 86 2.6E-7 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 PRINTS PR00315 GTP-binding elongation factor signature 10 23 2.6E-7 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 PRINTS PR00315 GTP-binding elongation factor signature 128 137 2.6E-7 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 Gene3D G3DSA:2.40.30.10 299 399 1.3E-29 T 23-04-2016 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 Pfam PF14492 Elongation Factor G, domain II 399 471 8.1E-23 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 SUPERFAMILY SSF52540 4 277 2.56E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 Gene3D G3DSA:3.30.70.240 593 677 8.0E-28 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 177 1.0E-16 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 PANTHER PTHR23115:SF98 1 175 0.0 T 23-04-2016 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 PANTHER PTHR23115:SF98 250 278 0.0 T 23-04-2016 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 PANTHER PTHR23115:SF98 298 687 0.0 T 23-04-2016 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 Pfam PF00009 Elongation factor Tu GTP binding domain 7 277 1.4E-40 T 23-04-2016 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 Pfam PF03764 Elongation factor G, domain IV 474 592 2.9E-45 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 SUPERFAMILY SSF54980 399 477 3.06E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 SMART SM00889 475 592 1.3E-67 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 Gene3D G3DSA:3.30.70.870 400 475 3.5E-23 T 23-04-2016 CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 Pfam PF00679 Elongation factor G C-terminus 594 674 3.1E-27 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS18025 f0f58b44cdf005152366812c45fc0c4f 690 SUPERFAMILY SSF54980 597 675 3.88E-24 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS15290 65982045b7040288166f945083869345 341 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 47.249 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CLI_RS15290 65982045b7040288166f945083869345 341 PANTHER PTHR30307:SF0 2 340 3.9E-190 T 23-04-2016 CLI_RS15290 65982045b7040288166f945083869345 341 Gene3D G3DSA:2.40.10.240 64 144 1.1E-29 T 23-04-2016 CLI_RS15290 65982045b7040288166f945083869345 341 Pfam PF02547 Queuosine biosynthesis protein 4 340 6.1E-148 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CLI_RS15290 65982045b7040288166f945083869345 341 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2 340 1.2E-147 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CLI_RS15290 65982045b7040288166f945083869345 341 SUPERFAMILY SSF111337 2 340 5.36E-144 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CLI_RS15290 65982045b7040288166f945083869345 341 PANTHER PTHR30307 2 340 3.9E-190 T 23-04-2016 CLI_RS15290 65982045b7040288166f945083869345 341 Gene3D G3DSA:3.40.1780.10 2 62 8.5E-107 T 23-04-2016 CLI_RS15290 65982045b7040288166f945083869345 341 Gene3D G3DSA:3.40.1780.10 178 340 8.5E-107 T 23-04-2016 CLI_RS07470 72a85e7572cf0d02ff2bcc78109c326c 433 Gene3D G3DSA:3.90.700.10 225 325 9.8E-31 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CLI_RS07470 72a85e7572cf0d02ff2bcc78109c326c 433 PANTHER PTHR11632 1 383 7.5E-171 T 23-04-2016 CLI_RS07470 72a85e7572cf0d02ff2bcc78109c326c 433 Pfam PF00890 FAD binding domain 6 369 1.8E-75 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CLI_RS07470 72a85e7572cf0d02ff2bcc78109c326c 433 SUPERFAMILY SSF51905 333 391 9.32E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS07470 72a85e7572cf0d02ff2bcc78109c326c 433 SUPERFAMILY SSF51905 5 247 9.32E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS07470 72a85e7572cf0d02ff2bcc78109c326c 433 PANTHER PTHR11632:SF27 1 383 7.5E-171 T 23-04-2016 CLI_RS07470 72a85e7572cf0d02ff2bcc78109c326c 433 Gene3D G3DSA:3.50.50.60 4 224 5.6E-82 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS07470 72a85e7572cf0d02ff2bcc78109c326c 433 Gene3D G3DSA:3.50.50.60 326 386 5.6E-82 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS07470 72a85e7572cf0d02ff2bcc78109c326c 433 SUPERFAMILY SSF56425 219 329 1.5E-33 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CLI_RS03480 248a5d629c383a533c6b0aa1baf143fe 291 SUPERFAMILY SSF46785 4 112 2.57E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03480 248a5d629c383a533c6b0aa1baf143fe 291 PANTHER PTHR30126:SF13 2 291 9.2E-111 T 23-04-2016 CLI_RS03480 248a5d629c383a533c6b0aa1baf143fe 291 Pfam PF03466 LysR substrate binding domain 93 291 7.1E-28 T 23-04-2016 IPR005119 LysR, substrate-binding CLI_RS03480 248a5d629c383a533c6b0aa1baf143fe 291 PANTHER PTHR30126 2 291 9.2E-111 T 23-04-2016 CLI_RS03480 248a5d629c383a533c6b0aa1baf143fe 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.8E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS03480 248a5d629c383a533c6b0aa1baf143fe 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.8E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS03480 248a5d629c383a533c6b0aa1baf143fe 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.8E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS03480 248a5d629c383a533c6b0aa1baf143fe 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.2E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS03480 248a5d629c383a533c6b0aa1baf143fe 291 Gene3D G3DSA:3.40.190.10 90 226 1.8E-24 T 23-04-2016 CLI_RS03480 248a5d629c383a533c6b0aa1baf143fe 291 Gene3D G3DSA:1.10.10.10 4 83 6.8E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03480 248a5d629c383a533c6b0aa1baf143fe 291 SUPERFAMILY SSF53850 92 291 1.58E-31 T 23-04-2016 CLI_RS17720 42e08820223156d69fd8f9b63d469858 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 6.0E-37 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CLI_RS17720 42e08820223156d69fd8f9b63d469858 72 PANTHER PTHR33370 1 72 1.7E-47 T 23-04-2016 CLI_RS17720 42e08820223156d69fd8f9b63d469858 72 SMART SM00316 2 72 0.0011 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS17720 42e08820223156d69fd8f9b63d469858 72 Gene3D G3DSA:2.40.50.140 1 72 9.2E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17720 42e08820223156d69fd8f9b63d469858 72 SUPERFAMILY SSF50249 1 70 2.86E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17720 42e08820223156d69fd8f9b63d469858 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.024 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CLI_RS17720 42e08820223156d69fd8f9b63d469858 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.1E-28 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CLI_RS18185 462a4695abf7c2e85401931f848cf60f 134 PANTHER PTHR10724 3 129 5.4E-41 T 23-04-2016 CLI_RS18185 462a4695abf7c2e85401931f848cf60f 134 SUPERFAMILY SSF50249 4 82 1.93E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS18185 462a4695abf7c2e85401931f848cf60f 134 SMART SM00316 4 73 2.9E-27 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS18185 462a4695abf7c2e85401931f848cf60f 134 Gene3D G3DSA:2.40.50.140 2 77 4.1E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS18185 462a4695abf7c2e85401931f848cf60f 134 Pfam PF00575 S1 RNA binding domain 3 73 6.1E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 CLI_RS17550 9fc44192662d92df0a66a3d3633e8f2b 356 PANTHER PTHR32154 3 351 1.6E-185 T 23-04-2016 CLI_RS17550 9fc44192662d92df0a66a3d3633e8f2b 356 Gene3D G3DSA:3.40.50.970 2 187 1.0E-70 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS17550 9fc44192662d92df0a66a3d3633e8f2b 356 PANTHER PTHR32154:SF19 3 351 1.6E-185 T 23-04-2016 CLI_RS17550 9fc44192662d92df0a66a3d3633e8f2b 356 SUPERFAMILY SSF52922 247 354 1.57E-19 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLI_RS17550 9fc44192662d92df0a66a3d3633e8f2b 356 Gene3D G3DSA:3.40.50.920 240 352 1.4E-18 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLI_RS17550 9fc44192662d92df0a66a3d3633e8f2b 356 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 250 344 9.3E-21 T 23-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CLI_RS17550 9fc44192662d92df0a66a3d3633e8f2b 356 SUPERFAMILY SSF52518 3 239 1.23E-63 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS17550 9fc44192662d92df0a66a3d3633e8f2b 356 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 237 5.0E-53 T 23-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CLI_RS05110 28afc05ddf1ed52ceabfeac675cea39b 256 SMART SM00382 27 212 3.2E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS05110 28afc05ddf1ed52ceabfeac675cea39b 256 SUPERFAMILY SSF52540 3 225 1.89E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05110 28afc05ddf1ed52ceabfeac675cea39b 256 Gene3D G3DSA:3.40.50.300 3 230 5.5E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05110 28afc05ddf1ed52ceabfeac675cea39b 256 PANTHER PTHR24220 4 249 3.3E-109 T 23-04-2016 CLI_RS05110 28afc05ddf1ed52ceabfeac675cea39b 256 Pfam PF00005 ABC transporter 18 167 3.6E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS05110 28afc05ddf1ed52ceabfeac675cea39b 256 PANTHER PTHR24220:SF309 4 249 3.3E-109 T 23-04-2016 CLI_RS05110 28afc05ddf1ed52ceabfeac675cea39b 256 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS04105 e62acf0e43dc3de8e9c88d4580cc9400 252 SUPERFAMILY SSF53335 15 217 6.43E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS04105 e62acf0e43dc3de8e9c88d4580cc9400 252 PANTHER PTHR10108 27 153 3.2E-24 T 23-04-2016 CLI_RS04105 e62acf0e43dc3de8e9c88d4580cc9400 252 PANTHER PTHR10108 180 213 3.2E-24 T 23-04-2016 CLI_RS04105 e62acf0e43dc3de8e9c88d4580cc9400 252 Pfam PF13649 Methyltransferase domain 43 139 2.0E-18 T 23-04-2016 CLI_RS04105 e62acf0e43dc3de8e9c88d4580cc9400 252 Gene3D G3DSA:3.40.50.150 28 248 2.2E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS03335 f96144da7836aab3d28311a12c9755a5 156 PANTHER PTHR23091:SF122 1 152 2.7E-24 T 23-04-2016 CLI_RS03335 f96144da7836aab3d28311a12c9755a5 156 Gene3D G3DSA:3.40.630.30 1 152 6.5E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03335 f96144da7836aab3d28311a12c9755a5 156 PANTHER PTHR23091 1 152 2.7E-24 T 23-04-2016 CLI_RS03335 f96144da7836aab3d28311a12c9755a5 156 SUPERFAMILY SSF55729 1 152 5.82E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03335 f96144da7836aab3d28311a12c9755a5 156 Pfam PF13673 Acetyltransferase (GNAT) domain 22 148 2.6E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 SUPERFAMILY SSF52540 172 359 6.8E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 Gene3D G3DSA:2.40.30.10 358 451 2.7E-26 T 23-04-2016 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 106 686 1.2E-260 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 SUPERFAMILY SSF52156 465 594 6.54E-39 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 Pfam PF00009 Elongation factor Tu GTP binding domain 189 347 1.3E-35 T 23-04-2016 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 191 346 6.7E-36 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 SUPERFAMILY SSF50447 359 442 1.34E-26 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 Pfam PF11987 Translation-initiation factor 2 472 577 5.0E-38 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 ProSitePatterns PS01176 Initiation factor 2 signature. 638 660 - T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 Gene3D G3DSA:2.40.30.10 589 685 3.6E-37 T 23-04-2016 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 SUPERFAMILY SSF50447 589 685 2.36E-32 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 PANTHER PTHR23115 540 683 7.7E-207 T 23-04-2016 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 110 159 1.2E-11 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 2 49 3.1E-15 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 685 17.194 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 PANTHER PTHR23115 169 515 7.7E-207 T 23-04-2016 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 Gene3D G3DSA:3.40.50.300 178 346 5.9E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 PANTHER PTHR23115:SF184 540 683 7.7E-207 T 23-04-2016 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 PANTHER PTHR23115:SF184 169 515 7.7E-207 T 23-04-2016 CLI_RS12060 9b8c9d020712aabaa3b84476b3f77285 688 Gene3D G3DSA:3.40.50.10050 487 566 2.1E-26 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 SUPERFAMILY SSF55874 323 460 8.12E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 SMART SM00388 251 316 5.3E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 457 2.0E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 SUPERFAMILY SSF158472 199 247 1.2E-9 T 23-04-2016 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 PANTHER PTHR24423:SF470 1 128 4.0E-167 T 23-04-2016 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 PANTHER PTHR24423:SF470 192 461 4.0E-167 T 23-04-2016 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 SUPERFAMILY SSF47384 234 312 1.47E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 Pfam PF00672 HAMP domain 179 246 4.8E-15 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 PANTHER PTHR24423 1 128 4.0E-167 T 23-04-2016 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 PANTHER PTHR24423 192 461 4.0E-167 T 23-04-2016 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 Gene3D G3DSA:3.30.565.10 322 460 4.7E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 254 313 1.9E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 7.4E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 7.4E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 7.4E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 SMART SM00387 359 460 2.0E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 SMART SM00304 198 250 7.5E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS01700 885a5bd5507b05ec4110274ec2d4c195 461 Gene3D G3DSA:1.10.287.130 241 310 6.7E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05245 2e2255112979bbcf250d101f40883ec9 557 PANTHER PTHR23077:SF75 220 526 1.7E-170 T 23-04-2016 CLI_RS05245 2e2255112979bbcf250d101f40883ec9 557 PANTHER PTHR23077:SF75 166 200 1.7E-170 T 23-04-2016 CLI_RS05245 2e2255112979bbcf250d101f40883ec9 557 SUPERFAMILY SSF52540 251 498 2.75E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05245 2e2255112979bbcf250d101f40883ec9 557 Gene3D G3DSA:3.40.50.300 251 424 2.1E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05245 2e2255112979bbcf250d101f40883ec9 557 SMART SM00382 283 418 3.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS05245 2e2255112979bbcf250d101f40883ec9 557 PANTHER PTHR23077 220 526 1.7E-170 T 23-04-2016 CLI_RS05245 2e2255112979bbcf250d101f40883ec9 557 PANTHER PTHR23077 166 200 1.7E-170 T 23-04-2016 CLI_RS05245 2e2255112979bbcf250d101f40883ec9 557 Gene3D G3DSA:1.10.8.60 425 495 1.4E-7 T 23-04-2016 CLI_RS05245 2e2255112979bbcf250d101f40883ec9 557 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 287 415 2.5E-28 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS07535 36835d5303f689bb5441f9a57efb57f0 256 Hamap MF_00912 Cell division protein DivIB [divIB]. 1 235 24.398 T 23-04-2016 IPR026580 Cell division protein DivIB CLI_RS07535 36835d5303f689bb5441f9a57efb57f0 256 Pfam PF08478 POTRA domain, FtsQ-type 45 113 1.9E-17 T 23-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type CLI_RS07535 36835d5303f689bb5441f9a57efb57f0 256 Pfam PF03799 Cell division protein FtsQ 123 244 1.8E-6 T 23-04-2016 IPR005548 Cell division protein FtsQ/DivIB CLI_RS07535 36835d5303f689bb5441f9a57efb57f0 256 PANTHER PTHR37820 1 256 3.0E-68 T 23-04-2016 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 PIRSF PIRSF000770 4 241 1.2E-38 T 23-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 Pfam PF04542 Sigma-70 region 2 15 85 2.1E-16 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 SUPERFAMILY SSF88946 4 85 2.2E-25 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 SUPERFAMILY SSF88659 150 238 7.48E-24 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 14 236 1.4E-80 T 23-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 SUPERFAMILY SSF88659 88 163 2.14E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 Gene3D G3DSA:1.10.601.10 7 78 2.4E-19 T 23-04-2016 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 Pfam PF04545 Sigma-70, region 4 185 234 5.0E-17 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 236 2.8E-37 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 PRINTS PR00046 Major sigma-70 factor signature 41 54 3.7E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 PRINTS PR00046 Major sigma-70 factor signature 221 232 3.7E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 PRINTS PR00046 Major sigma-70 factor signature 65 73 3.7E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 PRINTS PR00046 Major sigma-70 factor signature 206 221 3.7E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 PRINTS PR00046 Major sigma-70 factor signature 189 201 3.7E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 Gene3D G3DSA:1.10.10.10 173 237 2.2E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 Gene3D G3DSA:1.10.10.10 93 136 5.1E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 Pfam PF04539 Sigma-70 region 3 94 172 3.1E-9 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 PANTHER PTHR30385:SF7 2 242 2.9E-70 T 23-04-2016 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 PANTHER PTHR30385 2 242 2.9E-70 T 23-04-2016 CLI_RS13230 80d16ae611fcb023f284667e44d9b43f 242 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 41 54 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS00600 5c427cfbb922a3cb826b0fa9a4c4ec02 713 Pfam PF03477 ATP cone domain 3 91 1.7E-18 T 23-04-2016 IPR005144 ATP-cone domain CLI_RS00600 5c427cfbb922a3cb826b0fa9a4c4ec02 713 SUPERFAMILY SSF51998 115 685 2.5E-158 T 23-04-2016 CLI_RS00600 5c427cfbb922a3cb826b0fa9a4c4ec02 713 PANTHER PTHR21075 1 709 2.6E-250 T 23-04-2016 CLI_RS00600 5c427cfbb922a3cb826b0fa9a4c4ec02 713 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 114 702 2.5E-197 T 23-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CLI_RS00600 5c427cfbb922a3cb826b0fa9a4c4ec02 713 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 114 701 1.2E-182 T 23-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CLI_RS00600 5c427cfbb922a3cb826b0fa9a4c4ec02 713 Gene3D G3DSA:3.20.70.20 120 684 4.7E-170 T 23-04-2016 CLI_RS07555 560b9f04d0f38a60915378a58fe5737b 223 SUPERFAMILY SSF51419 3 216 3.66E-71 T 23-04-2016 IPR029066 PLP-binding barrel CLI_RS07555 560b9f04d0f38a60915378a58fe5737b 223 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 14 218 4.2E-66 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CLI_RS07555 560b9f04d0f38a60915378a58fe5737b 223 Pfam PF01168 Alanine racemase, N-terminal domain 3 218 3.3E-24 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS07555 560b9f04d0f38a60915378a58fe5737b 223 PIRSF PIRSF004848 1 223 6.4E-78 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CLI_RS07555 560b9f04d0f38a60915378a58fe5737b 223 Gene3D G3DSA:3.20.20.10 3 220 8.1E-79 T 23-04-2016 IPR029066 PLP-binding barrel CLI_RS07555 560b9f04d0f38a60915378a58fe5737b 223 PANTHER PTHR10146 15 220 1.3E-89 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CLI_RS13190 343d8f1effbe1692c56ce6f6f4344738 399 Pfam PF07995 Glucose / Sorbosone dehydrogenase 210 290 1.6E-5 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 CLI_RS13190 343d8f1effbe1692c56ce6f6f4344738 399 Gene3D G3DSA:2.120.10.30 45 395 5.1E-26 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS13190 343d8f1effbe1692c56ce6f6f4344738 399 SUPERFAMILY SSF50952 185 290 5.62E-18 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CLI_RS13190 343d8f1effbe1692c56ce6f6f4344738 399 SUPERFAMILY SSF50952 54 151 5.62E-18 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CLI_RS17075 521d41f5edf8427e05679845127508f9 400 PANTHER PTHR21499:SF31 1 400 7.1E-137 T 23-04-2016 CLI_RS17075 521d41f5edf8427e05679845127508f9 400 Pfam PF13840 ACT domain 333 392 3.6E-7 T 23-04-2016 IPR027795 GATS-like ACT domain CLI_RS17075 521d41f5edf8427e05679845127508f9 400 PANTHER PTHR21499 1 400 7.1E-137 T 23-04-2016 CLI_RS17075 521d41f5edf8427e05679845127508f9 400 SUPERFAMILY SSF55021 329 399 6.62E-16 T 23-04-2016 CLI_RS17075 521d41f5edf8427e05679845127508f9 400 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS17075 521d41f5edf8427e05679845127508f9 400 SUPERFAMILY SSF55021 252 326 2.23E-13 T 23-04-2016 CLI_RS17075 521d41f5edf8427e05679845127508f9 400 Pfam PF00696 Amino acid kinase family 3 228 8.4E-48 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS17075 521d41f5edf8427e05679845127508f9 400 Gene3D G3DSA:3.40.1160.10 1 242 8.9E-67 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS17075 521d41f5edf8427e05679845127508f9 400 PIRSF PIRSF000726 59 400 2.9E-106 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS17075 521d41f5edf8427e05679845127508f9 400 SUPERFAMILY SSF53633 4 241 3.14E-66 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS17075 521d41f5edf8427e05679845127508f9 400 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 60 398 1.3E-100 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 Gene3D G3DSA:3.40.50.300 924 1074 1.5E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 PANTHER PTHR10799:SF633 441 475 2.2E-277 T 23-04-2016 CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 PANTHER PTHR10799:SF633 68 120 2.2E-277 T 23-04-2016 CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 Pfam PF08455 Bacterial SNF2 helicase associated 242 640 3.2E-85 T 23-04-2016 IPR013663 Helicase, SWF/SNF/SWI type, bacterial CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 PANTHER PTHR10799 19 49 2.2E-277 T 23-04-2016 CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 PANTHER PTHR10799 441 475 2.2E-277 T 23-04-2016 CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 PANTHER PTHR10799 634 1097 2.2E-277 T 23-04-2016 CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 PANTHER PTHR10799 68 120 2.2E-277 T 23-04-2016 CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 Pfam PF00271 Helicase conserved C-terminal domain 927 1039 5.4E-20 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 Gene3D G3DSA:3.40.50.300 638 813 9.2E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 Pfam PF00176 SNF2 family N-terminal domain 665 916 1.1E-56 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 PANTHER PTHR10799:SF633 19 49 2.2E-277 T 23-04-2016 CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 PANTHER PTHR10799:SF633 634 1097 2.2E-277 T 23-04-2016 CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 PANTHER PTHR10799:SF633 188 219 2.2E-277 T 23-04-2016 CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 SUPERFAMILY SSF52540 852 1097 1.83E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 SMART SM00490 956 1039 8.1E-24 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 SUPERFAMILY SSF52540 632 850 4.54E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 PANTHER PTHR10799 188 219 2.2E-277 T 23-04-2016 CLI_RS08195 8af3ce953de7de1a919a5723e552789d 1097 SMART SM00487 643 826 7.1E-29 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS03955 b275d68d418d02b0aa3c6e04ed9b88a3 140 PANTHER PTHR10245 1 114 2.3E-15 T 23-04-2016 CLI_RS03955 b275d68d418d02b0aa3c6e04ed9b88a3 140 SUPERFAMILY SSF47413 1 64 4.02E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS03955 b275d68d418d02b0aa3c6e04ed9b88a3 140 Pfam PF01381 Helix-turn-helix 8 62 1.2E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS03955 b275d68d418d02b0aa3c6e04ed9b88a3 140 Gene3D G3DSA:1.10.260.40 3 126 9.1E-21 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS03955 b275d68d418d02b0aa3c6e04ed9b88a3 140 SMART SM00530 6 62 4.2E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS11455 735da9b970836ffafeaa392821bd48e3 100 PANTHER PTHR37832 1 99 7.4E-26 T 23-04-2016 CLI_RS11455 735da9b970836ffafeaa392821bd48e3 100 Pfam PF07876 Stress responsive A/B Barrel Domain 2 99 1.5E-26 T 23-04-2016 IPR013097 Stress responsive alpha-beta barrel CLI_RS11455 735da9b970836ffafeaa392821bd48e3 100 PANTHER PTHR37832:SF1 1 99 7.4E-26 T 23-04-2016 CLI_RS11455 735da9b970836ffafeaa392821bd48e3 100 Gene3D G3DSA:3.30.70.900 2 99 4.7E-30 T 23-04-2016 CLI_RS11455 735da9b970836ffafeaa392821bd48e3 100 SMART SM00886 2 100 2.0E-36 T 23-04-2016 IPR013097 Stress responsive alpha-beta barrel CLI_RS11455 735da9b970836ffafeaa392821bd48e3 100 SUPERFAMILY SSF54909 2 100 1.34E-23 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel CLI_RS12365 1811a84a008c58958c57b06428395bfe 335 Gene3D G3DSA:3.10.310.10 2 155 7.5E-68 T 23-04-2016 CLI_RS12365 1811a84a008c58958c57b06428395bfe 335 Pfam PF05544 Proline racemase 10 333 4.9E-129 T 23-04-2016 IPR008794 Proline racemase family CLI_RS12365 1811a84a008c58958c57b06428395bfe 335 SUPERFAMILY SSF54506 1 332 8.3E-112 T 23-04-2016 CLI_RS12365 1811a84a008c58958c57b06428395bfe 335 PANTHER PTHR33442:SF2 1 335 1.1E-203 T 23-04-2016 CLI_RS12365 1811a84a008c58958c57b06428395bfe 335 Gene3D G3DSA:3.10.310.10 156 322 1.2E-72 T 23-04-2016 CLI_RS12365 1811a84a008c58958c57b06428395bfe 335 PIRSF PIRSF029792 1 335 7.1E-143 T 23-04-2016 IPR008794 Proline racemase family CLI_RS12365 1811a84a008c58958c57b06428395bfe 335 PANTHER PTHR33442 1 335 1.1E-203 T 23-04-2016 CLI_RS10245 a9c14bfebee8061e6f57d9b69c888029 67 PANTHER PTHR10245 4 67 1.6E-25 T 23-04-2016 CLI_RS10245 a9c14bfebee8061e6f57d9b69c888029 67 SMART SM00530 7 62 9.6E-16 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS10245 a9c14bfebee8061e6f57d9b69c888029 67 PANTHER PTHR10245:SF61 4 67 1.6E-25 T 23-04-2016 CLI_RS10245 a9c14bfebee8061e6f57d9b69c888029 67 Gene3D G3DSA:1.10.260.40 4 65 1.3E-24 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS10245 a9c14bfebee8061e6f57d9b69c888029 67 SUPERFAMILY SSF47413 4 64 2.04E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS10245 a9c14bfebee8061e6f57d9b69c888029 67 Pfam PF01381 Helix-turn-helix 8 61 1.2E-16 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS10900 4172ef1af20273a61ab8f888dc752e2c 282 Pfam PF02567 Phenazine biosynthesis-like protein 6 278 4.9E-37 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CLI_RS10900 4172ef1af20273a61ab8f888dc752e2c 282 Gene3D G3DSA:3.10.310.10 123 266 1.1E-34 T 23-04-2016 CLI_RS10900 4172ef1af20273a61ab8f888dc752e2c 282 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 279 4.1E-43 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CLI_RS10900 4172ef1af20273a61ab8f888dc752e2c 282 PANTHER PTHR13774 1 282 1.2E-192 T 23-04-2016 CLI_RS10900 4172ef1af20273a61ab8f888dc752e2c 282 PIRSF PIRSF016184 1 282 2.4E-58 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CLI_RS10900 4172ef1af20273a61ab8f888dc752e2c 282 Gene3D G3DSA:3.10.310.10 1 122 2.2E-26 T 23-04-2016 CLI_RS10900 4172ef1af20273a61ab8f888dc752e2c 282 PANTHER PTHR13774:SF22 1 282 1.2E-192 T 23-04-2016 CLI_RS10900 4172ef1af20273a61ab8f888dc752e2c 282 SUPERFAMILY SSF54506 2 282 4.54E-42 T 23-04-2016 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 Gene3D G3DSA:1.10.560.10 366 516 6.7E-42 T 23-04-2016 IPR027413 GroEL-like equatorial domain CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 PRINTS PR00298 60kDa chaperonin signature 82 109 1.7E-70 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 PRINTS PR00298 60kDa chaperonin signature 348 373 1.7E-70 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 PRINTS PR00298 60kDa chaperonin signature 396 417 1.7E-70 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 PRINTS PR00298 60kDa chaperonin signature 26 52 1.7E-70 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 PRINTS PR00298 60kDa chaperonin signature 266 289 1.7E-70 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 7.7E-252 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 SUPERFAMILY SSF48592 6 133 1.08E-77 T 23-04-2016 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 SUPERFAMILY SSF48592 404 519 1.08E-77 T 23-04-2016 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 PANTHER PTHR11353 1 541 2.4E-244 T 23-04-2016 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 Gene3D G3DSA:1.10.560.10 6 194 2.5E-49 T 23-04-2016 IPR027413 GroEL-like equatorial domain CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 Hamap MF_00600 60 kDa chaperonin [groL]. 1 540 41.065 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 Gene3D G3DSA:3.50.7.10 195 365 1.3E-93 T 23-04-2016 IPR027409 GroEL-like apical domain CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 SUPERFAMILY SSF52029 183 374 3.89E-82 T 23-04-2016 IPR027409 GroEL-like apical domain CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 1.4E-104 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CLI_RS16875 f38b6b35e7b06f4605eaf552e8b6d1fb 541 SUPERFAMILY SSF54849 136 206 3.2E-26 T 23-04-2016 CLI_RS11260 2c5236e264c3cb5b26083e9c58855666 143 Pfam PF01047 MarR family 32 89 7.6E-14 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11260 2c5236e264c3cb5b26083e9c58855666 143 Gene3D G3DSA:1.10.10.10 7 140 5.6E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11260 2c5236e264c3cb5b26083e9c58855666 143 PANTHER PTHR33164 7 140 1.6E-20 T 23-04-2016 CLI_RS11260 2c5236e264c3cb5b26083e9c58855666 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site CLI_RS11260 2c5236e264c3cb5b26083e9c58855666 143 SUPERFAMILY SSF46785 7 140 1.74E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11260 2c5236e264c3cb5b26083e9c58855666 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 5.6E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11260 2c5236e264c3cb5b26083e9c58855666 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 5.6E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11260 2c5236e264c3cb5b26083e9c58855666 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 5.6E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11260 2c5236e264c3cb5b26083e9c58855666 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 5.6E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11260 2c5236e264c3cb5b26083e9c58855666 143 SMART SM00347 25 125 4.0E-23 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS13345 0e7b10ffe24e4689f27e04fcc9fa2912 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 94 141 2.5E-11 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLI_RS13345 0e7b10ffe24e4689f27e04fcc9fa2912 144 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 144 1.3E-50 T 23-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CLI_RS13345 0e7b10ffe24e4689f27e04fcc9fa2912 144 PANTHER PTHR30435 1 144 6.5E-69 T 23-04-2016 CLI_RS13345 0e7b10ffe24e4689f27e04fcc9fa2912 144 Pfam PF00460 Flagella basal body rod protein 8 35 2.8E-8 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLI_RS13345 0e7b10ffe24e4689f27e04fcc9fa2912 144 PANTHER PTHR30435:SF2 1 144 6.5E-69 T 23-04-2016 CLI_RS10480 2a9fef7fb273ce2e0d0a7a6983f6f42d 389 Pfam PF13395 HNH endonuclease 256 307 9.2E-10 T 23-04-2016 IPR003615 HNH nuclease CLI_RS11640 5a25aa2999c9b0ed4aa52134e823e4ff 145 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 12 133 1.0E-14 T 23-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CLI_RS17530 1f0af2943d83f42d6694ce9e7328ac55 323 PANTHER PTHR34294 1 318 6.8E-161 T 23-04-2016 CLI_RS17530 1f0af2943d83f42d6694ce9e7328ac55 323 SUPERFAMILY SSF46785 15 52 5.17E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17530 1f0af2943d83f42d6694ce9e7328ac55 323 SUPERFAMILY SSF100950 56 315 1.67E-70 T 23-04-2016 CLI_RS17530 1f0af2943d83f42d6694ce9e7328ac55 323 Pfam PF04198 Putative sugar-binding domain 57 313 7.4E-75 T 23-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 CLI_RS17530 1f0af2943d83f42d6694ce9e7328ac55 323 PANTHER PTHR34294:SF2 1 318 6.8E-161 T 23-04-2016 CLI_RS17530 1f0af2943d83f42d6694ce9e7328ac55 323 Gene3D G3DSA:1.10.10.10 19 52 7.6E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17530 1f0af2943d83f42d6694ce9e7328ac55 323 Gene3D G3DSA:3.40.50.1360 53 316 8.8E-83 T 23-04-2016 CLI_RS17530 1f0af2943d83f42d6694ce9e7328ac55 323 Pfam PF13412 Winged helix-turn-helix DNA-binding 19 50 3.1E-6 T 23-04-2016 CLI_RS05660 abf4cf428c7c5f35b8da209ede101216 73 PANTHER PTHR33238 1 71 7.9E-19 T 23-04-2016 CLI_RS05660 abf4cf428c7c5f35b8da209ede101216 73 Pfam PF04023 FeoA domain 1 71 1.3E-15 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLI_RS05660 abf4cf428c7c5f35b8da209ede101216 73 SMART SM00899 1 73 1.7E-20 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLI_RS05660 abf4cf428c7c5f35b8da209ede101216 73 SUPERFAMILY SSF50037 5 71 6.41E-18 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal CLI_RS16120 421435648fe56918d6ed8512182879a8 121 SUPERFAMILY SSF47413 2 68 1.04E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS16120 421435648fe56918d6ed8512182879a8 121 SMART SM00530 7 62 7.9E-20 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS16120 421435648fe56918d6ed8512182879a8 121 Gene3D G3DSA:1.10.260.40 1 71 6.2E-24 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS16120 421435648fe56918d6ed8512182879a8 121 Pfam PF01381 Helix-turn-helix 8 62 6.9E-19 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS16120 421435648fe56918d6ed8512182879a8 121 PANTHER PTHR10245 3 69 8.2E-18 T 23-04-2016 CLI_RS00575 8e58bbd911d9fe781c69b679fc467c01 63 PANTHER PTHR36923 1 62 1.1E-23 T 23-04-2016 CLI_RS00575 8e58bbd911d9fe781c69b679fc467c01 63 Gene3D G3DSA:3.30.70.20 1 60 1.3E-13 T 23-04-2016 CLI_RS00575 8e58bbd911d9fe781c69b679fc467c01 63 Pfam PF13459 4Fe-4S single cluster domain 3 60 8.7E-11 T 23-04-2016 CLI_RS00575 8e58bbd911d9fe781c69b679fc467c01 63 PRINTS PR00352 3Fe-4S ferredoxin signature 47 59 1.3E-5 T 23-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CLI_RS00575 8e58bbd911d9fe781c69b679fc467c01 63 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 1.3E-5 T 23-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CLI_RS00575 8e58bbd911d9fe781c69b679fc467c01 63 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 1.3E-5 T 23-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CLI_RS00575 8e58bbd911d9fe781c69b679fc467c01 63 PANTHER PTHR36923:SF2 1 62 1.1E-23 T 23-04-2016 CLI_RS00575 8e58bbd911d9fe781c69b679fc467c01 63 SUPERFAMILY SSF54862 1 60 7.78E-11 T 23-04-2016 CLI_RS17955 e8385e8daec1434002e1a0dc65dc6275 146 Gene3D G3DSA:1.10.1520.10 12 135 9.4E-44 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CLI_RS17955 e8385e8daec1434002e1a0dc65dc6275 146 PANTHER PTHR34276 12 146 1.7E-56 T 23-04-2016 CLI_RS17955 e8385e8daec1434002e1a0dc65dc6275 146 PIRSF PIRSF005520 6 141 2.4E-51 T 23-04-2016 IPR008226 Mini-ribonuclease 3 family CLI_RS17955 e8385e8daec1434002e1a0dc65dc6275 146 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 12 137 28.497 T 23-04-2016 IPR008226 Mini-ribonuclease 3 family CLI_RS17955 e8385e8daec1434002e1a0dc65dc6275 146 Pfam PF00636 Ribonuclease III domain 22 120 3.3E-14 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CLI_RS17955 e8385e8daec1434002e1a0dc65dc6275 146 SUPERFAMILY SSF69065 14 133 1.06E-34 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CLI_RS13525 8a3b0c4b6ce005d8f5bf998ce2307e97 212 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 3 207 7.2E-68 T 23-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like CLI_RS13525 8a3b0c4b6ce005d8f5bf998ce2307e97 212 PANTHER PTHR23416 1 210 1.3E-34 T 23-04-2016 CLI_RS13525 8a3b0c4b6ce005d8f5bf998ce2307e97 212 SUPERFAMILY SSF51161 1 210 2.08E-49 T 23-04-2016 IPR011004 Trimeric LpxA-like CLI_RS13525 8a3b0c4b6ce005d8f5bf998ce2307e97 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 167 195 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CLI_RS13525 8a3b0c4b6ce005d8f5bf998ce2307e97 212 Gene3D G3DSA:2.160.10.10 89 211 1.1E-35 T 23-04-2016 CLI_RS13525 8a3b0c4b6ce005d8f5bf998ce2307e97 212 PANTHER PTHR23416:SF23 1 210 1.3E-34 T 23-04-2016 CLI_RS13525 8a3b0c4b6ce005d8f5bf998ce2307e97 212 Gene3D G3DSA:3.40.50.20 1 88 8.4E-17 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS13525 8a3b0c4b6ce005d8f5bf998ce2307e97 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 157 4.2E-9 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS13525 8a3b0c4b6ce005d8f5bf998ce2307e97 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 159 191 9.4E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS05930 b4513e41c70fdf0088d358dfbce50a7d 103 SUPERFAMILY SSF52821 3 97 2.75E-28 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05930 b4513e41c70fdf0088d358dfbce50a7d 103 Gene3D G3DSA:3.40.250.10 5 97 2.7E-28 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05930 b4513e41c70fdf0088d358dfbce50a7d 103 Pfam PF00581 Rhodanese-like domain 7 97 4.8E-18 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05930 b4513e41c70fdf0088d358dfbce50a7d 103 SMART SM00450 7 103 3.4E-17 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS04125 850b0df4b04e4b31eed0dfd1f101d5cd 154 PANTHER PTHR36007:SF2 1 154 7.1E-116 T 23-04-2016 CLI_RS04125 850b0df4b04e4b31eed0dfd1f101d5cd 154 PANTHER PTHR36007 1 154 7.1E-116 T 23-04-2016 CLI_RS04125 850b0df4b04e4b31eed0dfd1f101d5cd 154 Pfam PF06695 Putative small multi-drug export protein 17 142 4.0E-44 T 23-04-2016 IPR009577 Putative small multi-drug export CLI_RS08100 516e33108da22fc2fe6bf66ce50b3a9f 73 Gene3D G3DSA:3.30.110.40 4 73 4.9E-17 T 23-04-2016 IPR001455 TusA-like domain CLI_RS08100 516e33108da22fc2fe6bf66ce50b3a9f 73 Pfam PF01206 Sulfurtransferase TusA 5 73 2.9E-15 T 23-04-2016 IPR001455 TusA-like domain CLI_RS08100 516e33108da22fc2fe6bf66ce50b3a9f 73 SUPERFAMILY SSF64307 4 73 3.4E-16 T 23-04-2016 IPR001455 TusA-like domain CLI_RS08100 516e33108da22fc2fe6bf66ce50b3a9f 73 PANTHER PTHR33279 4 73 8.9E-14 T 23-04-2016 CLI_RS14815 c5380cb2a8b6f50fbd93404ce985200b 202 Pfam PF10531 SLBB domain 61 113 3.5E-14 T 23-04-2016 IPR019554 Soluble ligand binding domain CLI_RS14815 c5380cb2a8b6f50fbd93404ce985200b 202 SMART SM00278 149 168 6.0E-4 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLI_RS14815 c5380cb2a8b6f50fbd93404ce985200b 202 SMART SM00278 179 198 5.6 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLI_RS14815 c5380cb2a8b6f50fbd93404ce985200b 202 Gene3D G3DSA:3.10.560.10 57 108 1.0E-10 T 23-04-2016 CLI_RS14815 c5380cb2a8b6f50fbd93404ce985200b 202 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 139 198 2.3E-16 T 23-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CLI_RS14815 c5380cb2a8b6f50fbd93404ce985200b 202 Gene3D G3DSA:1.10.150.280 132 199 1.5E-20 T 23-04-2016 CLI_RS14815 c5380cb2a8b6f50fbd93404ce985200b 202 PANTHER PTHR21180 11 201 7.5E-41 T 23-04-2016 CLI_RS14815 c5380cb2a8b6f50fbd93404ce985200b 202 SUPERFAMILY SSF47781 135 198 1.11E-24 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CLI_RS14815 c5380cb2a8b6f50fbd93404ce985200b 202 Pfam PF12836 Helix-hairpin-helix motif 139 197 2.9E-21 T 23-04-2016 CLI_RS06060 2f24a8dd655a97b6ce80d71c70b63fbe 293 Pfam PF00892 EamA-like transporter family 154 288 1.5E-32 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CLI_RS06060 2f24a8dd655a97b6ce80d71c70b63fbe 293 Pfam PF00892 EamA-like transporter family 6 140 4.5E-32 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CLI_RS06060 2f24a8dd655a97b6ce80d71c70b63fbe 293 PANTHER PTHR12715 1 290 3.9E-99 T 23-04-2016 CLI_RS06060 2f24a8dd655a97b6ce80d71c70b63fbe 293 SUPERFAMILY SSF103481 39 141 1.02E-16 T 23-04-2016 CLI_RS06060 2f24a8dd655a97b6ce80d71c70b63fbe 293 PANTHER PTHR12715:SF12 1 290 3.9E-99 T 23-04-2016 CLI_RS06060 2f24a8dd655a97b6ce80d71c70b63fbe 293 SUPERFAMILY SSF103481 189 290 5.89E-17 T 23-04-2016 CLI_RS04630 9528c8592797444fda0fb478153ace50 277 SUPERFAMILY SSF50151 1 53 6.02E-14 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS04630 9528c8592797444fda0fb478153ace50 277 PANTHER PTHR30185:SF2 1 276 2.7E-139 T 23-04-2016 CLI_RS04630 9528c8592797444fda0fb478153ace50 277 SMART SM01061 1 59 1.6E-22 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS04630 9528c8592797444fda0fb478153ace50 277 SUPERFAMILY SSF63520 174 274 3.92E-28 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS04630 9528c8592797444fda0fb478153ace50 277 Gene3D G3DSA:1.10.1790.10 172 275 1.2E-33 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS04630 9528c8592797444fda0fb478153ace50 277 Gene3D G3DSA:1.10.1790.10 65 165 5.6E-32 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS04630 9528c8592797444fda0fb478153ace50 277 Gene3D G3DSA:2.30.24.10 1 53 1.0E-16 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS04630 9528c8592797444fda0fb478153ace50 277 Pfam PF00874 PRD domain 181 273 7.8E-18 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS04630 9528c8592797444fda0fb478153ace50 277 Pfam PF00874 PRD domain 76 163 9.9E-24 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS04630 9528c8592797444fda0fb478153ace50 277 SUPERFAMILY SSF63520 56 166 6.41E-32 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS04630 9528c8592797444fda0fb478153ace50 277 Pfam PF03123 CAT RNA binding domain 1 56 4.5E-18 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS04630 9528c8592797444fda0fb478153ace50 277 PANTHER PTHR30185 1 276 2.7E-139 T 23-04-2016 CLI_RS18835 2c5679686e3e7bce3b15da26d977518e 217 PANTHER PTHR12428 7 212 1.2E-64 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CLI_RS18835 2c5679686e3e7bce3b15da26d977518e 217 PANTHER PTHR12428:SF14 7 212 1.2E-64 T 23-04-2016 CLI_RS18835 2c5679686e3e7bce3b15da26d977518e 217 Pfam PF02096 60Kd inner membrane protein 30 208 7.4E-62 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CLI_RS18835 2c5679686e3e7bce3b15da26d977518e 217 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 29 208 3.1E-64 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CLI_RS18835 2c5679686e3e7bce3b15da26d977518e 217 PRINTS PR00701 60kDa inner membrane protein signature 174 197 2.6E-14 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CLI_RS18835 2c5679686e3e7bce3b15da26d977518e 217 PRINTS PR00701 60kDa inner membrane protein signature 91 114 2.6E-14 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CLI_RS04570 75bb3a3cd34b84fff3c08b28f57eecea 142 Pfam PF04657 Putative inner membrane exporter, YdcZ 7 137 1.6E-28 T 23-04-2016 IPR006750 Putative inner membrane exporter, YdcZ CLI_RS04570 75bb3a3cd34b84fff3c08b28f57eecea 142 PANTHER PTHR34821 7 142 2.1E-20 T 23-04-2016 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Gene3D G3DSA:3.30.365.10 327 430 9.5E-35 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Pfam PF01799 [2Fe-2S] binding domain 70 141 2.5E-23 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Gene3D G3DSA:3.10.20.30 4 71 6.0E-21 T 23-04-2016 IPR012675 Beta-grasp domain CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 PANTHER PTHR11908 101 824 0.0 T 23-04-2016 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Gene3D G3DSA:3.30.365.10 274 326 8.4E-43 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Gene3D G3DSA:3.30.365.10 433 506 8.4E-43 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 PANTHER PTHR11908:SF91 101 824 0.0 T 23-04-2016 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 179 285 8.9E-23 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Gene3D G3DSA:3.30.365.10 696 842 1.7E-36 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Gene3D G3DSA:3.30.365.10 507 541 1.7E-36 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Gene3D G3DSA:3.90.1170.50 169 273 8.5E-35 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 SUPERFAMILY SSF47741 70 153 5.63E-26 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 SUPERFAMILY SSF56003 277 842 8.9E-148 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 36 44 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 SMART SM01008 177 285 1.5E-35 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 SUPERFAMILY SSF54665 162 304 1.28E-35 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 52 2.8E-4 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Gene3D G3DSA:1.10.150.120 72 168 1.2E-27 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 TIGRFAM TIGR03311 Se_dep_XDH: selenium-dependent xanthine dehydrogenase 2 849 0.0 T 23-04-2016 IPR017697 Selenium-dependent xanthine dehydrogenase CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 SUPERFAMILY SSF54292 7 75 1.31E-18 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Gene3D G3DSA:3.30.365.10 598 691 4.8E-23 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 689 792 4.8E-15 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14350 e9d9222b4ecb667a6f2c4cc537366deb 851 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 302 682 1.3E-101 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS07435 3ddf1b46d61da7615c54d9ea172d2fd5 572 Gene3D G3DSA:1.10.390.10 410 564 2.8E-50 T 23-04-2016 CLI_RS07435 3ddf1b46d61da7615c54d9ea172d2fd5 572 SUPERFAMILY SSF55486 245 564 4.94E-77 T 23-04-2016 CLI_RS07435 3ddf1b46d61da7615c54d9ea172d2fd5 572 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 251 404 7.0E-43 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 CLI_RS07435 3ddf1b46d61da7615c54d9ea172d2fd5 572 PANTHER PTHR33794 2 571 2.7E-203 T 23-04-2016 CLI_RS07435 3ddf1b46d61da7615c54d9ea172d2fd5 572 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 408 564 3.2E-51 T 23-04-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 CLI_RS07435 3ddf1b46d61da7615c54d9ea172d2fd5 572 Pfam PF03413 Peptidase propeptide and YPEB domain 149 213 3.5E-6 T 23-04-2016 IPR025711 PepSY domain CLI_RS07435 3ddf1b46d61da7615c54d9ea172d2fd5 572 PANTHER PTHR33794:SF1 2 571 2.7E-203 T 23-04-2016 CLI_RS07435 3ddf1b46d61da7615c54d9ea172d2fd5 572 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 482 498 1.9E-15 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07435 3ddf1b46d61da7615c54d9ea172d2fd5 572 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 417 428 1.9E-15 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07435 3ddf1b46d61da7615c54d9ea172d2fd5 572 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 396 412 1.9E-15 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07435 3ddf1b46d61da7615c54d9ea172d2fd5 572 Gene3D G3DSA:3.10.170.10 250 409 1.3E-41 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 CLI_RS07435 3ddf1b46d61da7615c54d9ea172d2fd5 572 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 86 133 4.2E-7 T 23-04-2016 IPR011096 FTP domain CLI_RS10195 4d323961e6cd74265417274c3a55f792 240 Pfam PF00005 ABC transporter 17 165 6.8E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS10195 4d323961e6cd74265417274c3a55f792 240 SUPERFAMILY SSF52540 1 235 1.25E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10195 4d323961e6cd74265417274c3a55f792 240 Gene3D G3DSA:3.40.50.300 1 237 6.0E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10195 4d323961e6cd74265417274c3a55f792 240 SMART SM00382 26 221 2.8E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS10195 4d323961e6cd74265417274c3a55f792 240 PIRSF PIRSF039085 1 240 1.0E-119 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CLI_RS10195 4d323961e6cd74265417274c3a55f792 240 PANTHER PTHR24220:SF327 3 240 2.1E-147 T 23-04-2016 CLI_RS10195 4d323961e6cd74265417274c3a55f792 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS10195 4d323961e6cd74265417274c3a55f792 240 PANTHER PTHR24220 3 240 2.1E-147 T 23-04-2016 CLI_RS05055 060fb6d17fb8de2d47c42d900ffb5a88 254 PANTHER PTHR30520:SF5 1 254 6.6E-109 T 23-04-2016 CLI_RS05055 060fb6d17fb8de2d47c42d900ffb5a88 254 Gene3D G3DSA:1.20.1080.10 26 253 1.9E-69 T 23-04-2016 IPR023271 Aquaporin-like CLI_RS05055 060fb6d17fb8de2d47c42d900ffb5a88 254 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 159 169 - T 23-04-2016 IPR024002 Formate/nitrite transporter, conserved site CLI_RS05055 060fb6d17fb8de2d47c42d900ffb5a88 254 PANTHER PTHR30520 1 254 6.6E-109 T 23-04-2016 CLI_RS05055 060fb6d17fb8de2d47c42d900ffb5a88 254 Pfam PF01226 Formate/nitrite transporter 9 249 1.1E-68 T 23-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CLI_RS05055 060fb6d17fb8de2d47c42d900ffb5a88 254 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 76 85 - T 23-04-2016 IPR024002 Formate/nitrite transporter, conserved site CLI_RS05845 98023748e4f288f0ae99e353e665333e 184 Pfam PF12464 Maltose acetyltransferase 9 57 6.8E-16 T 23-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CLI_RS05845 98023748e4f288f0ae99e353e665333e 184 Gene3D G3DSA:2.160.10.10 2 183 3.4E-65 T 23-04-2016 CLI_RS05845 98023748e4f288f0ae99e353e665333e 184 PANTHER PTHR23416 1 184 2.4E-98 T 23-04-2016 CLI_RS05845 98023748e4f288f0ae99e353e665333e 184 PANTHER PTHR23416:SF58 1 184 2.4E-98 T 23-04-2016 CLI_RS05845 98023748e4f288f0ae99e353e665333e 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 162 5.5E-9 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS05845 98023748e4f288f0ae99e353e665333e 184 SMART SM01266 7 58 4.6E-20 T 23-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CLI_RS05845 98023748e4f288f0ae99e353e665333e 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CLI_RS05845 98023748e4f288f0ae99e353e665333e 184 SUPERFAMILY SSF51161 5 183 8.04E-55 T 23-04-2016 IPR011004 Trimeric LpxA-like CLI_RS07780 644ed97acefdeb0c3031d8e7e4c6f1d2 183 Pfam PF04463 Protein of unknown function (DUF523) 7 155 5.7E-7 T 23-04-2016 IPR007553 Domain of unknown function DUF523 CLI_RS17590 17e279059e547f8c8252d94c8b2bb833 282 SUPERFAMILY SSF143597 44 244 1.01E-68 T 23-04-2016 CLI_RS17590 17e279059e547f8c8252d94c8b2bb833 282 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 123 239 7.1E-45 T 23-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal CLI_RS17590 17e279059e547f8c8252d94c8b2bb833 282 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 17 253 3.3E-77 T 23-04-2016 IPR014046 Diadenylate cyclase-like CLI_RS17590 17e279059e547f8c8252d94c8b2bb833 282 PANTHER PTHR34185:SF1 1 280 2.3E-116 T 23-04-2016 CLI_RS17590 17e279059e547f8c8252d94c8b2bb833 282 PIRSF PIRSF004793 8 272 4.3E-96 T 23-04-2016 IPR014046 Diadenylate cyclase-like CLI_RS17590 17e279059e547f8c8252d94c8b2bb833 282 Gene3D G3DSA:3.40.1700.10 115 243 2.3E-52 T 23-04-2016 CLI_RS17590 17e279059e547f8c8252d94c8b2bb833 282 PANTHER PTHR34185 1 280 2.3E-116 T 23-04-2016 CLI_RS13970 5e904a44f1a48140bab608c1fc2dccf1 94 Pfam PF12978 Domain of Unknown Function with PDB structure (DUF3862) 23 93 5.1E-6 T 23-04-2016 IPR024418 Protein of unknown function DUF3862 CLI_RS03560 f31175cbf8737cd28d03ed2daa93e4d7 323 SUPERFAMILY SSF53822 40 286 2.04E-12 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CLI_RS03560 f31175cbf8737cd28d03ed2daa93e4d7 323 Gene3D G3DSA:3.40.50.2300 28 157 1.0E-54 T 23-04-2016 CLI_RS03560 f31175cbf8737cd28d03ed2daa93e4d7 323 PANTHER PTHR35271 1 322 2.2E-74 T 23-04-2016 CLI_RS03560 f31175cbf8737cd28d03ed2daa93e4d7 323 Gene3D G3DSA:3.40.50.2300 158 288 1.3E-50 T 23-04-2016 CLI_RS03560 f31175cbf8737cd28d03ed2daa93e4d7 323 Pfam PF04392 ABC transporter substrate binding protein 32 308 2.0E-82 T 23-04-2016 IPR007487 ABC transporter, substrate-binding protein CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 240 256 4.1E-35 T 23-04-2016 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 171 185 4.1E-35 T 23-04-2016 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 293 4.1E-35 T 23-04-2016 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 210 224 4.1E-35 T 23-04-2016 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 257 274 4.1E-35 T 23-04-2016 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 Gene3D G3DSA:3.40.50.880 149 347 1.8E-69 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 PRINTS PR00097 Anthranilate synthase component II signature 213 222 8.8E-8 T 23-04-2016 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 PRINTS PR00097 Anthranilate synthase component II signature 323 336 8.8E-8 T 23-04-2016 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 PRINTS PR00097 Anthranilate synthase component II signature 240 251 8.8E-8 T 23-04-2016 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 348 46.653 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 PANTHER PTHR11405 1 346 1.9E-199 T 23-04-2016 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 SUPERFAMILY SSF52317 145 348 3.7E-60 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 SUPERFAMILY SSF52021 1 146 3.53E-57 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 SMART SM01097 1 131 5.3E-88 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 3 346 1.4E-145 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 Gene3D G3DSA:3.50.30.20 1 146 2.6E-60 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 1.5E-53 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 PRINTS PR00096 Glutamine amidotransferase superfamily signature 213 222 3.8E-12 T 23-04-2016 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 PRINTS PR00096 Glutamine amidotransferase superfamily signature 240 251 3.8E-12 T 23-04-2016 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 PRINTS PR00096 Glutamine amidotransferase superfamily signature 323 336 3.8E-12 T 23-04-2016 CLI_RS09005 9e6c2b57562045018c31290198df5c12 349 Pfam PF00117 Glutamine amidotransferase class-I 173 346 4.6E-47 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CLI_RS01480 8b43455c7f9c6249b0c979916bc21cd1 125 SUPERFAMILY SSF53927 1 122 1.42E-26 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CLI_RS01480 8b43455c7f9c6249b0c979916bc21cd1 125 PANTHER PTHR11644 8 124 4.5E-26 T 23-04-2016 CLI_RS01480 8b43455c7f9c6249b0c979916bc21cd1 125 Gene3D G3DSA:3.40.140.10 3 124 1.8E-32 T 23-04-2016 CLI_RS01480 8b43455c7f9c6249b0c979916bc21cd1 125 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 13 100 2.1E-6 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CLI_RS01480 8b43455c7f9c6249b0c979916bc21cd1 125 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 94 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLI_RS04070 8e21a7ca9a496765e7810665b7ac8c77 178 TIGRFAM TIGR03209 P21_Cbot: transcriptional regulator BotR, P-21 18 159 9.8E-74 T 23-04-2016 IPR017622 Transcription regulator, P21/BotR , Clostridium toxin-associated CLI_RS04070 8e21a7ca9a496765e7810665b7ac8c77 178 SUPERFAMILY SSF88659 113 175 8.6E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS04070 8e21a7ca9a496765e7810665b7ac8c77 178 Gene3D G3DSA:1.10.1740.10 6 94 3.6E-4 T 23-04-2016 CLI_RS04070 8e21a7ca9a496765e7810665b7ac8c77 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 169 5.3E-15 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS04070 8e21a7ca9a496765e7810665b7ac8c77 178 Gene3D G3DSA:1.10.10.10 123 171 1.4E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03110 4ce416c9d7a33a44f68e4a7402b263d1 39 TIGRFAM TIGR04333 Clo7Bot_mod_Cys: Cys-rich peptide, Clo7bot family 1 33 2.9E-18 T 23-04-2016 IPR027601 Cys-rich peptide, Clo7bot family CLI_RS13415 a47972380c7deff69309b26108c4f0d2 355 Pfam PF08666 SAF domain 299 353 3.4E-11 T 23-04-2016 IPR013974 SAF domain CLI_RS13415 a47972380c7deff69309b26108c4f0d2 355 PANTHER PTHR23416:SF62 14 307 6.1E-142 T 23-04-2016 CLI_RS13415 a47972380c7deff69309b26108c4f0d2 355 SMART SM00858 298 355 9.7E-9 T 23-04-2016 IPR013974 SAF domain CLI_RS13415 a47972380c7deff69309b26108c4f0d2 355 SUPERFAMILY SSF51569 8 308 9.32E-79 T 23-04-2016 CLI_RS13415 a47972380c7deff69309b26108c4f0d2 355 SUPERFAMILY SSF51269 291 355 7.85E-19 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CLI_RS13415 a47972380c7deff69309b26108c4f0d2 355 Gene3D G3DSA:3.20.20.70 7 281 7.9E-90 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS13415 a47972380c7deff69309b26108c4f0d2 355 PANTHER PTHR23416 14 307 6.1E-142 T 23-04-2016 CLI_RS13415 a47972380c7deff69309b26108c4f0d2 355 Gene3D G3DSA:3.90.1210.10 294 355 3.6E-23 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CLI_RS13415 a47972380c7deff69309b26108c4f0d2 355 Pfam PF03102 NeuB family 42 281 2.0E-80 T 23-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 TIGRFAM TIGR01078 arcA: arginine deiminase 5 406 2.1E-166 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 Gene3D G3DSA:3.75.10.10 3 68 3.5E-128 T 23-04-2016 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 Gene3D G3DSA:3.75.10.10 153 407 3.5E-128 T 23-04-2016 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PANTHER PTHR12737:SF13 311 408 8.9E-126 T 23-04-2016 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PANTHER PTHR12737:SF13 152 291 8.9E-126 T 23-04-2016 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PANTHER PTHR12737:SF13 1 92 8.9E-126 T 23-04-2016 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PRINTS PR01466 Bacterial arginine deiminase signature 3 23 6.76E-55 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 6.76E-55 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 6.76E-55 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PRINTS PR01466 Bacterial arginine deiminase signature 180 195 6.76E-55 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PRINTS PR01466 Bacterial arginine deiminase signature 152 170 6.76E-55 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 6.76E-55 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PIRSF PIRSF006356 1 407 1.2E-164 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PANTHER PTHR12737 311 408 8.9E-126 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PANTHER PTHR12737 152 291 8.9E-126 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 PANTHER PTHR12737 1 92 8.9E-126 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 Hamap MF_00242 Arginine deiminase [arcA]. 2 407 45.038 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 Pfam PF02274 Amidinotransferase 19 404 4.8E-91 T 23-04-2016 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 Gene3D G3DSA:1.10.3930.10 69 152 2.1E-22 T 23-04-2016 CLI_RS08155 51e43d38fc782dbd8cb06e2512a9bc2e 408 SUPERFAMILY SSF55909 2 407 1.64E-127 T 23-04-2016 CLI_RS04290 ce9abd23e26fedcd78b94d9152eb5cc9 389 PANTHER PTHR11271 1 389 1.7E-207 T 23-04-2016 CLI_RS04290 ce9abd23e26fedcd78b94d9152eb5cc9 389 Gene3D G3DSA:2.30.40.10 2 61 3.2E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS04290 ce9abd23e26fedcd78b94d9152eb5cc9 389 PANTHER PTHR11271:SF39 1 389 1.7E-207 T 23-04-2016 CLI_RS04290 ce9abd23e26fedcd78b94d9152eb5cc9 389 Pfam PF01979 Amidohydrolase family 52 381 3.5E-14 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CLI_RS04290 ce9abd23e26fedcd78b94d9152eb5cc9 389 Gene3D G3DSA:3.20.20.140 62 383 2.6E-42 T 23-04-2016 CLI_RS04290 ce9abd23e26fedcd78b94d9152eb5cc9 389 SUPERFAMILY SSF51338 348 385 1.12E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS04290 ce9abd23e26fedcd78b94d9152eb5cc9 389 SUPERFAMILY SSF51338 2 56 1.12E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS04290 ce9abd23e26fedcd78b94d9152eb5cc9 389 SUPERFAMILY SSF51556 55 349 1.24E-43 T 23-04-2016 IPR032466 Metal-dependent hydrolase CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 234 345 1.7E-7 T 23-04-2016 IPR000014 PAS domain CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 SUPERFAMILY SSF158472 180 227 4.32E-10 T 23-04-2016 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 SMART SM00387 456 568 8.8E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 SMART SM00304 178 230 4.6E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 Pfam PF00512 His Kinase A (phospho-acceptor) domain 346 410 3.8E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 SMART SM00388 346 411 4.4E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 SUPERFAMILY SSF47384 331 411 6.47E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 SMART SM00091 237 302 1.1E-5 T 23-04-2016 IPR000014 PAS domain CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 Gene3D G3DSA:3.30.450.20 29 133 2.4E-7 T 23-04-2016 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 Pfam PF13188 PAS domain 238 289 5.9E-6 T 23-04-2016 IPR000014 PAS domain CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 458 567 3.2E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 Gene3D G3DSA:3.30.565.10 397 566 9.6E-52 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 Gene3D G3DSA:1.10.287.130 338 396 1.7E-23 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 SUPERFAMILY SSF55874 400 566 2.49E-47 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 Pfam PF00672 HAMP domain 161 226 4.4E-15 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 PANTHER PTHR24423 9 16 6.1E-103 T 23-04-2016 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 PANTHER PTHR24423 223 568 6.1E-103 T 23-04-2016 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 SUPERFAMILY SSF55785 231 317 5.44E-8 T 23-04-2016 IPR000014 PAS domain CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 507 1.1E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 546 1.1E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 565 1.1E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 521 1.1E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 Pfam PF16736 Single Cache-like 30 133 2.6E-6 T 23-04-2016 IPR031967 PhoR, single Cache-like domain CLI_RS12650 fb262cf4591a9349cf205e76c2da1ce7 569 Gene3D G3DSA:3.30.450.20 232 337 2.1E-12 T 23-04-2016 CLI_RS03775 d52d902bcad28d23b8c47659363bb37f 259 SUPERFAMILY SSF46955 127 210 5.49E-17 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS03775 d52d902bcad28d23b8c47659363bb37f 259 SMART SM00422 5 70 8.3E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS03775 d52d902bcad28d23b8c47659363bb37f 259 SMART SM00422 127 195 3.4E-7 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS03775 d52d902bcad28d23b8c47659363bb37f 259 PANTHER PTHR30204:SF15 119 232 3.6E-29 T 23-04-2016 CLI_RS03775 d52d902bcad28d23b8c47659363bb37f 259 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS03775 d52d902bcad28d23b8c47659363bb37f 259 PANTHER PTHR30204 119 232 3.6E-29 T 23-04-2016 CLI_RS03775 d52d902bcad28d23b8c47659363bb37f 259 Gene3D G3DSA:1.10.1660.10 5 119 9.2E-16 T 23-04-2016 CLI_RS03775 d52d902bcad28d23b8c47659363bb37f 259 Gene3D G3DSA:1.10.1660.10 130 255 3.4E-22 T 23-04-2016 CLI_RS03775 d52d902bcad28d23b8c47659363bb37f 259 Pfam PF13411 MerR HTH family regulatory protein 130 194 6.0E-14 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS03775 d52d902bcad28d23b8c47659363bb37f 259 Pfam PF00376 MerR family regulatory protein 7 43 4.1E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS03775 d52d902bcad28d23b8c47659363bb37f 259 SUPERFAMILY SSF46955 5 111 4.58E-14 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS00380 51e7d69e612c96645e181c3ed6a0085d 313 Gene3D G3DSA:1.20.58.340 237 312 1.3E-20 T 23-04-2016 CLI_RS00380 51e7d69e612c96645e181c3ed6a0085d 313 SUPERFAMILY SSF144083 248 310 5.62E-15 T 23-04-2016 CLI_RS00380 51e7d69e612c96645e181c3ed6a0085d 313 PANTHER PTHR21535:SF40 14 313 1.2E-108 T 23-04-2016 CLI_RS00380 51e7d69e612c96645e181c3ed6a0085d 313 SUPERFAMILY SSF143865 1 247 1.83E-50 T 23-04-2016 CLI_RS00380 51e7d69e612c96645e181c3ed6a0085d 313 PANTHER PTHR21535 14 313 1.2E-108 T 23-04-2016 CLI_RS00380 51e7d69e612c96645e181c3ed6a0085d 313 Pfam PF01544 CorA-like Mg2+ transporter protein 24 309 3.0E-51 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CLI_RS12045 099390bf4a1b80923279c0ff5c9cd185 289 PANTHER PTHR13767:SF2 1 288 6.8E-127 T 23-04-2016 CLI_RS12045 099390bf4a1b80923279c0ff5c9cd185 289 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 171 225 1.7E-10 T 23-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal CLI_RS12045 099390bf4a1b80923279c0ff5c9cd185 289 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 170 2.4E-60 T 23-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CLI_RS12045 099390bf4a1b80923279c0ff5c9cd185 289 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 288 18.998 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS12045 099390bf4a1b80923279c0ff5c9cd185 289 PANTHER PTHR13767 1 288 6.8E-127 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS12045 099390bf4a1b80923279c0ff5c9cd185 289 SUPERFAMILY SSF55120 1 225 2.16E-83 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS12045 099390bf4a1b80923279c0ff5c9cd185 289 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 209 4.7E-79 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 PANTHER PTHR24095 3 509 2.4E-149 T 23-04-2016 CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 SUPERFAMILY SSF56801 30 521 1.57E-89 T 23-04-2016 CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 Pfam PF00501 AMP-binding enzyme 44 428 3.1E-58 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 Gene3D G3DSA:3.30.300.30 423 524 5.9E-20 T 23-04-2016 CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 Pfam PF00550 Phosphopantetheine attachment site 543 606 1.2E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 Gene3D G3DSA:3.40.50.980 33 190 1.3E-36 T 23-04-2016 CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 Gene3D G3DSA:1.10.1200.10 538 607 9.4E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 23-04-2016 IPR020845 AMP-binding, conserved site CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 SMART SM01294 541 607 0.0019 T 23-04-2016 CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 Gene3D G3DSA:3.40.50.980 191 342 4.8E-28 T 23-04-2016 CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 Gene3D G3DSA:2.30.38.10 343 418 8.2E-15 T 23-04-2016 CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 SUPERFAMILY SSF47336 538 607 1.31E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 PANTHER PTHR24095:SF137 3 509 2.4E-149 T 23-04-2016 CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 PRINTS PR00154 AMP-binding signature 179 190 8.9E-5 T 23-04-2016 IPR020459 AMP-binding CLI_RS12945 f1521a4ff80e0896dfa19a6565c92243 609 PRINTS PR00154 AMP-binding signature 191 199 8.9E-5 T 23-04-2016 IPR020459 AMP-binding CLI_RS16400 61d6423e794abf518666f31510c3cbfc 318 Pfam PF08279 HTH domain 8 58 1.3E-10 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 CLI_RS16400 61d6423e794abf518666f31510c3cbfc 318 Pfam PF13280 WYL domain 145 310 7.7E-38 T 23-04-2016 IPR026881 WYL domain CLI_RS16400 61d6423e794abf518666f31510c3cbfc 318 PANTHER PTHR34580 1 318 3.9E-110 T 23-04-2016 CLI_RS16400 61d6423e794abf518666f31510c3cbfc 318 SUPERFAMILY SSF46785 6 58 5.28E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS16400 61d6423e794abf518666f31510c3cbfc 318 Gene3D G3DSA:1.10.10.10 2 61 5.5E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS16400 61d6423e794abf518666f31510c3cbfc 318 PANTHER PTHR34580:SF3 1 318 3.9E-110 T 23-04-2016 CLI_RS05015 51b8b94cfda5222cdd40009b58753e2d 369 SUPERFAMILY SSF159672 8 38 1.83E-58 T 23-04-2016 CLI_RS05015 51b8b94cfda5222cdd40009b58753e2d 369 SUPERFAMILY SSF159672 73 258 1.83E-58 T 23-04-2016 CLI_RS05015 51b8b94cfda5222cdd40009b58753e2d 369 Pfam PF11761 Cobalamin biosynthesis central region 168 230 1.3E-5 T 23-04-2016 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 CLI_RS05015 51b8b94cfda5222cdd40009b58753e2d 369 Pfam PF11760 Cobalamin synthesis G N-terminal 82 162 1.2E-37 T 23-04-2016 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 CLI_RS05015 51b8b94cfda5222cdd40009b58753e2d 369 PANTHER PTHR37477 30 369 1.0E-71 T 23-04-2016 CLI_RS05015 51b8b94cfda5222cdd40009b58753e2d 369 Pfam PF01890 Cobalamin synthesis G C-terminus 251 366 3.4E-26 T 23-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CLI_RS05015 51b8b94cfda5222cdd40009b58753e2d 369 SUPERFAMILY SSF159664 244 368 6.28E-31 T 23-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CLI_RS05015 51b8b94cfda5222cdd40009b58753e2d 369 Gene3D G3DSA:3.30.420.180 244 368 1.4E-27 T 23-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CLI_RS05015 51b8b94cfda5222cdd40009b58753e2d 369 PANTHER PTHR37477:SF1 30 369 1.0E-71 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 36 46 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 321 4.8E-64 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 415 1.6E-70 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.6E-70 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.6E-70 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 422 442 1.6E-70 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 1.6E-70 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 301 308 1.6E-70 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 1.6E-70 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 1.6E-70 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 1.6E-70 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 Gene3D G3DSA:3.50.50.60 3 141 4.3E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 Gene3D G3DSA:3.50.50.60 142 330 2.3E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 SUPERFAMILY SSF51905 3 315 3.28E-58 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PIRSF PIRSF000350 1 457 5.8E-95 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 308 4.3E-34 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 4.3E-34 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 4.3E-34 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.3E-34 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 4.3E-34 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PANTHER PTHR22912:SF20 3 451 9.0E-187 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 PANTHER PTHR22912 3 451 9.0E-187 T 23-04-2016 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 SUPERFAMILY SSF55424 337 457 2.23E-40 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 457 3.1E-160 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 447 9.7E-37 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLI_RS03680 6a7d02f9d391d611dd04aaf7a54839c7 462 Gene3D G3DSA:3.30.390.30 331 457 5.1E-45 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLI_RS08305 3bdfec90ded1584c247e23bb15c34b81 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 175 2.9E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08305 3bdfec90ded1584c247e23bb15c34b81 176 Pfam PF04542 Sigma-70 region 2 38 75 3.1E-4 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08305 3bdfec90ded1584c247e23bb15c34b81 176 SUPERFAMILY SSF88946 2 76 1.57E-11 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08305 3bdfec90ded1584c247e23bb15c34b81 176 Pfam PF08281 Sigma-70, region 4 120 171 1.0E-7 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08305 3bdfec90ded1584c247e23bb15c34b81 176 Gene3D G3DSA:1.10.10.10 116 176 2.8E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08305 3bdfec90ded1584c247e23bb15c34b81 176 SUPERFAMILY SSF88659 103 175 1.87E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08305 3bdfec90ded1584c247e23bb15c34b81 176 Gene3D G3DSA:1.10.1740.10 2 99 2.6E-7 T 23-04-2016 CLI_RS08305 3bdfec90ded1584c247e23bb15c34b81 176 PANTHER PTHR30385 1 176 3.7E-29 T 23-04-2016 CLI_RS00620 bc705c6088933c38748a6340bbe522dc 112 SUPERFAMILY SSF46785 12 107 8.35E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS00620 bc705c6088933c38748a6340bbe522dc 112 PANTHER PTHR33169 1 104 3.9E-54 T 23-04-2016 CLI_RS00620 bc705c6088933c38748a6340bbe522dc 112 Pfam PF03551 Transcriptional regulator PadR-like family 16 86 2.1E-21 T 23-04-2016 IPR005149 Transcription regulator PadR, N-terminal CLI_RS00620 bc705c6088933c38748a6340bbe522dc 112 PANTHER PTHR33169:SF1 1 104 3.9E-54 T 23-04-2016 CLI_RS00620 bc705c6088933c38748a6340bbe522dc 112 Gene3D G3DSA:1.10.10.10 4 104 1.0E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS00730 c09f5b87da5a05b12a4fc9a9a8de9fe0 266 Pfam PF03575 Peptidase family S51 9 209 9.7E-24 T 23-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 CLI_RS00730 c09f5b87da5a05b12a4fc9a9a8de9fe0 266 Gene3D G3DSA:3.40.50.880 10 227 6.1E-33 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS00730 c09f5b87da5a05b12a4fc9a9a8de9fe0 266 PANTHER PTHR36175 5 266 1.3E-92 T 23-04-2016 CLI_RS00730 c09f5b87da5a05b12a4fc9a9a8de9fe0 266 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 9 258 2.6E-106 T 23-04-2016 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 CLI_RS00730 c09f5b87da5a05b12a4fc9a9a8de9fe0 266 SUPERFAMILY SSF52317 9 223 3.2E-23 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS00730 c09f5b87da5a05b12a4fc9a9a8de9fe0 266 PIRSF PIRSF032067 2 264 2.8E-65 T 23-04-2016 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 CLI_RS06440 e0dacf19a9ca6d9eae68f06cf6c9dbfb 75 Pfam PF13783 Domain of unknown function (DUF4177) 4 68 9.1E-7 T 23-04-2016 IPR025234 Protein of unknown function DUF4177 CLI_RS14705 81b67b71968102ae34b4516408d12b43 432 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 146 166 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CLI_RS14705 81b67b71968102ae34b4516408d12b43 432 Pfam PF00919 Uncharacterized protein family UPF0004 2 97 2.6E-25 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CLI_RS14705 81b67b71968102ae34b4516408d12b43 432 PANTHER PTHR11918 1 432 3.6E-146 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS14705 81b67b71968102ae34b4516408d12b43 432 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 2 425 7.4E-135 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CLI_RS14705 81b67b71968102ae34b4516408d12b43 432 Pfam PF04055 Radical SAM superfamily 148 318 1.8E-27 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS14705 81b67b71968102ae34b4516408d12b43 432 PANTHER PTHR11918:SF45 1 432 3.6E-146 T 23-04-2016 CLI_RS14705 81b67b71968102ae34b4516408d12b43 432 SMART SM00729 142 360 1.1E-55 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS14705 81b67b71968102ae34b4516408d12b43 432 Gene3D G3DSA:3.80.30.20 140 370 2.9E-74 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS14705 81b67b71968102ae34b4516408d12b43 432 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 5 416 1.8E-140 T 23-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 CLI_RS14705 81b67b71968102ae34b4516408d12b43 432 SUPERFAMILY SSF102114 116 364 2.22E-57 T 23-04-2016 CLI_RS18390 cf717fa8807044757f1d80553e91c9e4 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 31.477 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS18390 cf717fa8807044757f1d80553e91c9e4 159 SUPERFAMILY SSF75217 1 157 2.09E-59 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CLI_RS18390 cf717fa8807044757f1d80553e91c9e4 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 2.0E-53 T 23-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS18390 cf717fa8807044757f1d80553e91c9e4 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 2.2E-60 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS18390 cf717fa8807044757f1d80553e91c9e4 159 PIRSF PIRSF004505 1 159 9.8E-59 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS18390 cf717fa8807044757f1d80553e91c9e4 159 Gene3D G3DSA:3.40.1280.10 1 159 6.7E-64 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLI_RS18390 cf717fa8807044757f1d80553e91c9e4 159 PANTHER PTHR33603:SF1 1 159 4.3E-69 T 23-04-2016 CLI_RS18390 cf717fa8807044757f1d80553e91c9e4 159 PANTHER PTHR33603 1 159 4.3E-69 T 23-04-2016 CLI_RS11415 250c8c8fbdb516930e12aebebc0ce8b4 585 PANTHER PTHR24222:SF23 2 578 4.4E-219 T 23-04-2016 CLI_RS11415 250c8c8fbdb516930e12aebebc0ce8b4 585 Gene3D G3DSA:3.40.50.300 336 574 2.0E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11415 250c8c8fbdb516930e12aebebc0ce8b4 585 SUPERFAMILY SSF90123 10 325 1.7E-57 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS11415 250c8c8fbdb516930e12aebebc0ce8b4 585 SUPERFAMILY SSF52540 327 578 1.39E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11415 250c8c8fbdb516930e12aebebc0ce8b4 585 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS11415 250c8c8fbdb516930e12aebebc0ce8b4 585 Pfam PF00664 ABC transporter transmembrane region 21 291 3.7E-28 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS11415 250c8c8fbdb516930e12aebebc0ce8b4 585 SMART SM00382 370 556 2.8E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS11415 250c8c8fbdb516930e12aebebc0ce8b4 585 Pfam PF00005 ABC transporter 361 510 3.8E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS11415 250c8c8fbdb516930e12aebebc0ce8b4 585 PANTHER PTHR24222 2 578 4.4E-219 T 23-04-2016 CLI_RS11415 250c8c8fbdb516930e12aebebc0ce8b4 585 Gene3D G3DSA:1.20.1560.10 10 321 5.7E-49 T 23-04-2016 CLI_RS01110 6da1abb9712ec709cbeec509b5537b38 199 Gene3D G3DSA:1.10.287.110 2 83 1.2E-21 T 23-04-2016 IPR001623 DnaJ domain CLI_RS01110 6da1abb9712ec709cbeec509b5537b38 199 Pfam PF00226 DnaJ domain 2 67 2.8E-19 T 23-04-2016 IPR001623 DnaJ domain CLI_RS01110 6da1abb9712ec709cbeec509b5537b38 199 SMART SM00271 1 62 3.6E-22 T 23-04-2016 IPR001623 DnaJ domain CLI_RS01110 6da1abb9712ec709cbeec509b5537b38 199 Gene3D G3DSA:1.25.40.10 104 148 5.9E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS01110 6da1abb9712ec709cbeec509b5537b38 199 PRINTS PR00625 DnaJ domain signature 42 62 4.1E-16 T 23-04-2016 IPR001623 DnaJ domain CLI_RS01110 6da1abb9712ec709cbeec509b5537b38 199 PRINTS PR00625 DnaJ domain signature 4 22 4.1E-16 T 23-04-2016 IPR001623 DnaJ domain CLI_RS01110 6da1abb9712ec709cbeec509b5537b38 199 PRINTS PR00625 DnaJ domain signature 22 37 4.1E-16 T 23-04-2016 IPR001623 DnaJ domain CLI_RS01110 6da1abb9712ec709cbeec509b5537b38 199 SUPERFAMILY SSF46565 1 76 2.62E-22 T 23-04-2016 IPR001623 DnaJ domain CLI_RS01110 6da1abb9712ec709cbeec509b5537b38 199 SUPERFAMILY SSF48452 101 149 1.06E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS01110 6da1abb9712ec709cbeec509b5537b38 199 PANTHER PTHR24078 1 57 1.2E-17 T 23-04-2016 CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 Gene3D G3DSA:3.30.70.1400 56 143 5.5E-33 T 23-04-2016 CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 PANTHER PTHR13847 7 351 6.2E-74 T 23-04-2016 CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 358 4.6E-27 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 SUPERFAMILY SSF103025 3 284 1.91E-101 T 23-04-2016 CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 5 363 1.4E-128 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 Pfam PF01571 Aminomethyltransferase folate-binding domain 13 261 2.3E-96 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 PANTHER PTHR13847:SF5 7 351 6.2E-74 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 SUPERFAMILY SSF101790 276 366 5.4E-24 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 PIRSF PIRSF006487 1 370 1.8E-106 T 23-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 Gene3D G3DSA:3.30.1360.120 146 238 1.1E-51 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 Gene3D G3DSA:3.30.1360.120 4 55 1.1E-51 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 Gene3D G3DSA:2.40.30.110 285 356 2.7E-25 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CLI_RS03660 95bd8b722d76e246d6cc66d4ec1583e1 370 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 365 45.913 T 23-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CLI_RS02550 094ef979855d29a0ca876b005dd6961c 252 Pfam PF06738 Putative threonine/serine exporter 9 246 9.5E-70 T 23-04-2016 IPR010619 Putative threonine/serine exporter CLI_RS02550 094ef979855d29a0ca876b005dd6961c 252 PANTHER PTHR31082:SF6 1 246 9.3E-87 T 23-04-2016 CLI_RS02550 094ef979855d29a0ca876b005dd6961c 252 PANTHER PTHR31082 1 246 9.3E-87 T 23-04-2016 CLI_RS01080 66acef9fcfdf7dde3ba7d402c575c21d 262 Gene3D G3DSA:1.10.287.860 149 203 1.8E-22 T 23-04-2016 CLI_RS01080 66acef9fcfdf7dde3ba7d402c575c21d 262 Gene3D G3DSA:3.30.460.10 5 146 2.3E-38 T 23-04-2016 CLI_RS01080 66acef9fcfdf7dde3ba7d402c575c21d 262 PANTHER PTHR21262 5 261 3.2E-124 T 23-04-2016 CLI_RS01080 66acef9fcfdf7dde3ba7d402c575c21d 262 SMART SM00954 45 166 5.8E-41 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 CLI_RS01080 66acef9fcfdf7dde3ba7d402c575c21d 262 Pfam PF04607 Region found in RelA / SpoT proteins 45 164 1.2E-34 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 CLI_RS01080 66acef9fcfdf7dde3ba7d402c575c21d 262 PANTHER PTHR21262:SF11 5 261 3.2E-124 T 23-04-2016 CLI_RS01080 66acef9fcfdf7dde3ba7d402c575c21d 262 SUPERFAMILY SSF81301 5 199 3.27E-56 T 23-04-2016 CLI_RS16230 f7879234a9a18b154a07dc97afcee2d9 442 Gene3D G3DSA:3.40.50.300 70 228 1.9E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16230 f7879234a9a18b154a07dc97afcee2d9 442 PANTHER PTHR32204 1 442 1.8E-129 T 23-04-2016 CLI_RS16230 f7879234a9a18b154a07dc97afcee2d9 442 SMART SM00382 84 222 0.0016 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS16230 f7879234a9a18b154a07dc97afcee2d9 442 SUPERFAMILY SSF52540 46 338 4.01E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16230 f7879234a9a18b154a07dc97afcee2d9 442 Pfam PF07728 AAA domain (dynein-related subfamily) 87 214 4.1E-19 T 23-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CLI_RS10630 608486eb00527118fa4cbf8e708b86a4 414 PANTHER PTHR23523:SF2 7 413 3.4E-160 T 23-04-2016 CLI_RS10630 608486eb00527118fa4cbf8e708b86a4 414 SUPERFAMILY SSF103473 9 402 7.32E-50 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS10630 608486eb00527118fa4cbf8e708b86a4 414 Gene3D G3DSA:1.20.1250.20 227 398 1.4E-14 T 23-04-2016 CLI_RS10630 608486eb00527118fa4cbf8e708b86a4 414 Gene3D G3DSA:1.20.1250.20 25 204 1.3E-17 T 23-04-2016 CLI_RS10630 608486eb00527118fa4cbf8e708b86a4 414 Pfam PF07690 Major Facilitator Superfamily 39 366 4.1E-28 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS10630 608486eb00527118fa4cbf8e708b86a4 414 PANTHER PTHR23523 7 413 3.4E-160 T 23-04-2016 CLI_RS18850 47bcd1f1d295da6f8d28b3e5105facf9 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 14.406 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18850 47bcd1f1d295da6f8d28b3e5105facf9 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 4 44 4.1E-18 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18850 47bcd1f1d295da6f8d28b3e5105facf9 44 Pfam PF00468 Ribosomal protein L34 2 44 7.0E-21 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18850 47bcd1f1d295da6f8d28b3e5105facf9 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 23-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18850 47bcd1f1d295da6f8d28b3e5105facf9 44 PANTHER PTHR14503 1 44 2.1E-14 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS18850 47bcd1f1d295da6f8d28b3e5105facf9 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 31 9.0E-10 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS08110 507967325d4138c840c90d6b77fb0173 296 Gene3D G3DSA:3.40.190.10 186 260 6.9E-14 T 23-04-2016 CLI_RS08110 507967325d4138c840c90d6b77fb0173 296 Pfam PF03466 LysR substrate binding domain 91 290 6.4E-25 T 23-04-2016 IPR005119 LysR, substrate-binding CLI_RS08110 507967325d4138c840c90d6b77fb0173 296 Gene3D G3DSA:3.40.190.10 92 185 3.3E-10 T 23-04-2016 CLI_RS08110 507967325d4138c840c90d6b77fb0173 296 Gene3D G3DSA:1.10.10.10 1 87 1.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08110 507967325d4138c840c90d6b77fb0173 296 PANTHER PTHR30126:SF11 1 290 2.9E-92 T 23-04-2016 CLI_RS08110 507967325d4138c840c90d6b77fb0173 296 SUPERFAMILY SSF46785 1 86 4.45E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08110 507967325d4138c840c90d6b77fb0173 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.3E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS08110 507967325d4138c840c90d6b77fb0173 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.3E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS08110 507967325d4138c840c90d6b77fb0173 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.3E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS08110 507967325d4138c840c90d6b77fb0173 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.7E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS08110 507967325d4138c840c90d6b77fb0173 296 PANTHER PTHR30126 1 290 2.9E-92 T 23-04-2016 CLI_RS08110 507967325d4138c840c90d6b77fb0173 296 SUPERFAMILY SSF53850 89 293 3.91E-25 T 23-04-2016 CLI_RS15370 5b38224f42b45b90bca4c6df72bf404b 335 PIRSF PIRSF011570 2 335 1.8E-150 T 23-04-2016 IPR010894 Stage V sporulation AD CLI_RS15370 5b38224f42b45b90bca4c6df72bf404b 335 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 8 334 3.1E-151 T 23-04-2016 IPR010894 Stage V sporulation AD CLI_RS15370 5b38224f42b45b90bca4c6df72bf404b 335 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 6 334 2.8E-163 T 23-04-2016 IPR010894 Stage V sporulation AD CLI_RS15370 5b38224f42b45b90bca4c6df72bf404b 335 Gene3D G3DSA:3.40.47.10 57 177 4.2E-7 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS15370 5b38224f42b45b90bca4c6df72bf404b 335 SUPERFAMILY SSF53901 57 260 5.76E-15 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS05050 729dd16f3f271cad96f113b8fc5942d4 229 SUPERFAMILY SSF51206 9 143 5.63E-29 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CLI_RS05050 729dd16f3f271cad96f113b8fc5942d4 229 SUPERFAMILY SSF46785 149 226 7.21E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05050 729dd16f3f271cad96f113b8fc5942d4 229 PANTHER PTHR24567:SF32 1 227 1.5E-86 T 23-04-2016 CLI_RS05050 729dd16f3f271cad96f113b8fc5942d4 229 Pfam PF00027 Cyclic nucleotide-binding domain 34 116 2.3E-11 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CLI_RS05050 729dd16f3f271cad96f113b8fc5942d4 229 SMART SM00419 170 218 1.6E-7 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS05050 729dd16f3f271cad96f113b8fc5942d4 229 PANTHER PTHR24567 1 227 1.5E-86 T 23-04-2016 CLI_RS05050 729dd16f3f271cad96f113b8fc5942d4 229 SMART SM00100 14 131 2.5E-11 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CLI_RS05050 729dd16f3f271cad96f113b8fc5942d4 229 Pfam PF13545 Crp-like helix-turn-helix domain 152 224 8.9E-17 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS05050 729dd16f3f271cad96f113b8fc5942d4 229 Gene3D G3DSA:2.60.120.10 9 144 2.7E-30 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS05050 729dd16f3f271cad96f113b8fc5942d4 229 Gene3D G3DSA:1.10.10.10 148 226 2.4E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 4 872 0.0 T 23-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 SUPERFAMILY SSF51621 513 873 7.85E-133 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 Gene3D G3DSA:3.30.470.20 245 342 4.4E-41 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 SUPERFAMILY SSF56059 3 380 7.65E-151 T 23-04-2016 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 304 357 7.0E-12 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 19 298 1.5E-50 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 Gene3D G3DSA:1.20.80.30 113 199 3.2E-38 T 23-04-2016 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 SUPERFAMILY SSF52009 381 507 1.01E-37 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 Gene3D G3DSA:3.20.20.60 535 873 2.3E-145 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 Pfam PF00391 PEP-utilising enzyme, mobile domain 423 504 1.0E-28 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 519 871 9.9E-93 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 451 462 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 762 780 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 Gene3D G3DSA:3.50.30.10 403 507 2.2E-42 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 PANTHER PTHR22931 5 877 0.0 T 23-04-2016 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 Gene3D G3DSA:3.30.1490.20 5 112 2.0E-61 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 Gene3D G3DSA:3.30.1490.20 201 244 2.0E-61 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 PIRSF PIRSF000853 3 877 0.0 T 23-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 PANTHER PTHR22931:SF9 5 877 0.0 T 23-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLI_RS14635 588864522f39c33d05dd9be04e3ed5b2 877 Gene3D G3DSA:1.10.189.10 343 402 2.1E-29 T 23-04-2016 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 36 256 3.5E-83 T 23-04-2016 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 PANTHER PTHR30603:SF17 23 257 1.8E-174 T 23-04-2016 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 SUPERFAMILY SSF88659 114 189 7.41E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 PRINTS PR00046 Major sigma-70 factor signature 242 253 2.9E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 PRINTS PR00046 Major sigma-70 factor signature 66 79 2.9E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 PRINTS PR00046 Major sigma-70 factor signature 210 222 2.9E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 PRINTS PR00046 Major sigma-70 factor signature 90 98 2.9E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 PRINTS PR00046 Major sigma-70 factor signature 227 242 2.9E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 Pfam PF04545 Sigma-70, region 4 206 255 2.2E-15 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 Pfam PF04539 Sigma-70 region 3 124 176 2.7E-7 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 Gene3D G3DSA:1.10.601.10 14 109 6.1E-34 T 23-04-2016 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 Pfam PF04542 Sigma-70 region 2 42 111 1.4E-18 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 PIRSF PIRSF000770 11 257 5.2E-36 T 23-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 257 1.4E-153 T 23-04-2016 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 SUPERFAMILY SSF88659 175 256 2.24E-17 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 PANTHER PTHR30603 23 257 1.8E-174 T 23-04-2016 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 Gene3D G3DSA:1.10.10.10 203 255 5.1E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 Gene3D G3DSA:1.10.10.10 110 165 1.0E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 256 2.0E-37 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 66 79 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 227 253 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12675 4d9b8af5b4325ff3d2d32c323a0917f3 257 SUPERFAMILY SSF88946 5 110 1.23E-35 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS05290 7fa74e7440fc50618ad43a826f641dfc 156 SMART SM00347 29 132 2.3E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS05290 7fa74e7440fc50618ad43a826f641dfc 156 Pfam PF01047 MarR family 39 93 5.4E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS05290 7fa74e7440fc50618ad43a826f641dfc 156 PANTHER PTHR35790 2 156 4.7E-38 T 23-04-2016 CLI_RS05290 7fa74e7440fc50618ad43a826f641dfc 156 Gene3D G3DSA:1.10.10.10 36 151 6.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05290 7fa74e7440fc50618ad43a826f641dfc 156 PANTHER PTHR35790:SF1 2 156 4.7E-38 T 23-04-2016 CLI_RS05290 7fa74e7440fc50618ad43a826f641dfc 156 SUPERFAMILY SSF46785 37 151 2.27E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07605 d9141662b6e8aeb435fc8bca3735b226 147 TIGRFAM TIGR00077 lspA: signal peptidase II 4 145 3.8E-33 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CLI_RS07605 d9141662b6e8aeb435fc8bca3735b226 147 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 147 15.897 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CLI_RS07605 d9141662b6e8aeb435fc8bca3735b226 147 PANTHER PTHR33695:SF1 3 147 3.4E-51 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CLI_RS07605 d9141662b6e8aeb435fc8bca3735b226 147 PANTHER PTHR33695 3 147 3.4E-51 T 23-04-2016 CLI_RS07605 d9141662b6e8aeb435fc8bca3735b226 147 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 125 141 1.8E-16 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CLI_RS07605 d9141662b6e8aeb435fc8bca3735b226 147 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 88 103 1.8E-16 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CLI_RS07605 d9141662b6e8aeb435fc8bca3735b226 147 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 44 52 1.8E-16 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CLI_RS07605 d9141662b6e8aeb435fc8bca3735b226 147 Pfam PF01252 Signal peptidase (SPase) II 6 144 4.0E-34 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CLI_RS07605 d9141662b6e8aeb435fc8bca3735b226 147 ProSitePatterns PS00855 Signal peptidases II signature. 91 103 - T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CLI_RS06860 d4002584c6772f7814651edff637376f 375 PANTHER PTHR41771 1 375 4.1E-114 T 23-04-2016 CLI_RS06860 d4002584c6772f7814651edff637376f 375 PANTHER PTHR41771:SF1 1 375 4.1E-114 T 23-04-2016 CLI_RS06860 d4002584c6772f7814651edff637376f 375 Pfam PF07907 YibE/F-like protein 131 368 2.6E-81 T 23-04-2016 IPR012507 YibE/F-like CLI_RS15545 a061cafe1376e0e7221ef7a5bc2bfc1c 300 Gene3D G3DSA:3.40.50.10750 113 271 2.0E-43 T 23-04-2016 CLI_RS15545 a061cafe1376e0e7221ef7a5bc2bfc1c 300 PIRSF PIRSF000428 1 300 8.4E-83 T 23-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CLI_RS15545 a061cafe1376e0e7221ef7a5bc2bfc1c 300 PANTHER PTHR23406:SF1 19 292 5.5E-24 T 23-04-2016 CLI_RS15545 a061cafe1376e0e7221ef7a5bc2bfc1c 300 Pfam PF01515 Phosphate acetyl/butaryl transferase 76 294 3.1E-46 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CLI_RS15545 a061cafe1376e0e7221ef7a5bc2bfc1c 300 SUPERFAMILY SSF53659 4 297 5.35E-59 T 23-04-2016 CLI_RS15545 a061cafe1376e0e7221ef7a5bc2bfc1c 300 PANTHER PTHR23406 19 292 5.5E-24 T 23-04-2016 CLI_RS17490 9b9d5eeefa712e808532d8ef07436fc3 225 SUPERFAMILY SSF51569 1 216 1.67E-69 T 23-04-2016 CLI_RS17490 9b9d5eeefa712e808532d8ef07436fc3 225 PANTHER PTHR10683:SF11 1 225 8.9E-116 T 23-04-2016 CLI_RS17490 9b9d5eeefa712e808532d8ef07436fc3 225 ProSitePatterns PS00958 Transaldolase active site. 83 100 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CLI_RS17490 9b9d5eeefa712e808532d8ef07436fc3 225 Gene3D G3DSA:3.20.20.70 3 214 1.6E-61 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS17490 9b9d5eeefa712e808532d8ef07436fc3 225 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CLI_RS17490 9b9d5eeefa712e808532d8ef07436fc3 225 PANTHER PTHR10683 1 225 8.9E-116 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CLI_RS17490 9b9d5eeefa712e808532d8ef07436fc3 225 Pfam PF00923 Transaldolase 3 210 1.0E-52 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CLI_RS06375 1b9df721fa2ddd6b2462924a0d7fed5c 190 Pfam PF05067 Manganese containing catalase 1 183 5.6E-57 T 23-04-2016 IPR007760 Manganese catalase CLI_RS06375 1b9df721fa2ddd6b2462924a0d7fed5c 190 PANTHER PTHR30565 2 182 1.6E-41 T 23-04-2016 CLI_RS06375 1b9df721fa2ddd6b2462924a0d7fed5c 190 SUPERFAMILY SSF47240 1 189 3.17E-69 T 23-04-2016 IPR009078 Ferritin-like superfamily CLI_RS06375 1b9df721fa2ddd6b2462924a0d7fed5c 190 Gene3D G3DSA:1.20.1260.10 1 183 4.8E-71 T 23-04-2016 IPR012347 Ferritin-related CLI_RS01660 4fbd886ac04702038a91cfb33d72d912 527 SUPERFAMILY SSF55604 449 523 6.28E-20 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS01660 4fbd886ac04702038a91cfb33d72d912 527 PANTHER PTHR30009 7 523 0.0 T 23-04-2016 CLI_RS01660 4fbd886ac04702038a91cfb33d72d912 527 Pfam PF00367 phosphotransferase system, EIIB 453 483 8.1E-14 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS01660 4fbd886ac04702038a91cfb33d72d912 527 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 461 478 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS01660 4fbd886ac04702038a91cfb33d72d912 527 Pfam PF02378 Phosphotransferase system, EIIC 14 351 1.4E-66 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS01660 4fbd886ac04702038a91cfb33d72d912 527 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 508 8.4E-17 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS01660 4fbd886ac04702038a91cfb33d72d912 527 PANTHER PTHR30009:SF5 7 523 0.0 T 23-04-2016 CLI_RS01660 4fbd886ac04702038a91cfb33d72d912 527 Gene3D G3DSA:3.30.1360.60 446 524 6.0E-25 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS08045 496f48306052602c777cf32c1337e5b7 422 PANTHER PTHR11476 1 420 2.0E-118 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CLI_RS08045 496f48306052602c777cf32c1337e5b7 422 SUPERFAMILY SSF55681 7 330 1.49E-58 T 23-04-2016 CLI_RS08045 496f48306052602c777cf32c1337e5b7 422 Pfam PF13393 Histidyl-tRNA synthetase 11 322 8.3E-73 T 23-04-2016 CLI_RS08045 496f48306052602c777cf32c1337e5b7 422 Gene3D G3DSA:3.30.930.10 22 323 2.6E-77 T 23-04-2016 CLI_RS08045 496f48306052602c777cf32c1337e5b7 422 PANTHER PTHR11476:SF5 1 420 2.0E-118 T 23-04-2016 CLI_RS08045 496f48306052602c777cf32c1337e5b7 422 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 13 327 4.1E-106 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 CLI_RS08045 496f48306052602c777cf32c1337e5b7 422 PIRSF PIRSF001549 4 421 1.3E-78 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CLI_RS08045 496f48306052602c777cf32c1337e5b7 422 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 18 380 30.584 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 CLI_RS16970 90dd49f6ec630923505237e70f1361d1 128 Pfam PF17032 zinc-ribbon family 23 123 7.4E-25 T 23-04-2016 IPR031493 Zinc-ribbon 15 CLI_RS16970 90dd49f6ec630923505237e70f1361d1 128 PANTHER PTHR36718 2 126 3.5E-92 T 23-04-2016 CLI_RS16970 90dd49f6ec630923505237e70f1361d1 128 PANTHER PTHR36718:SF2 2 126 3.5E-92 T 23-04-2016 CLI_RS14825 794585c6ae14cd6925c7488a5c9b8c5d 300 PANTHER PTHR11079:SF73 23 300 9.8E-100 T 23-04-2016 CLI_RS14825 794585c6ae14cd6925c7488a5c9b8c5d 300 Gene3D G3DSA:3.10.290.10 21 63 1.6E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS14825 794585c6ae14cd6925c7488a5c9b8c5d 300 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 21 299 1.2E-83 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS14825 794585c6ae14cd6925c7488a5c9b8c5d 300 SUPERFAMILY SSF55174 20 65 2.16E-5 T 23-04-2016 CLI_RS14825 794585c6ae14cd6925c7488a5c9b8c5d 300 SUPERFAMILY SSF55120 72 298 6.37E-69 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS14825 794585c6ae14cd6925c7488a5c9b8c5d 300 Pfam PF00849 RNA pseudouridylate synthase 88 240 2.0E-32 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS14825 794585c6ae14cd6925c7488a5c9b8c5d 300 PANTHER PTHR11079 23 300 9.8E-100 T 23-04-2016 CLI_RS12125 3c764bd9febf9ae2865f451d93936e65 252 SUPERFAMILY SSF64005 17 244 2.62E-93 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CLI_RS12125 3c764bd9febf9ae2865f451d93936e65 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 29 249 6.0E-85 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CLI_RS12125 3c764bd9febf9ae2865f451d93936e65 252 PANTHER PTHR10291 1 249 2.2E-124 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CLI_RS12125 3c764bd9febf9ae2865f451d93936e65 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 22 250 41.72 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CLI_RS12125 3c764bd9febf9ae2865f451d93936e65 252 Gene3D G3DSA:3.40.1180.10 15 250 1.8E-101 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CLI_RS12125 3c764bd9febf9ae2865f451d93936e65 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 22 249 8.1E-90 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CLI_RS12125 3c764bd9febf9ae2865f451d93936e65 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 195 212 - T 23-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 CLI_RS16360 c4981c719200b87e855bb1fb3f1e82f0 232 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 3 230 4.0E-93 T 23-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 CLI_RS16360 c4981c719200b87e855bb1fb3f1e82f0 232 Pfam PF04055 Radical SAM superfamily 21 176 1.1E-26 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS16360 c4981c719200b87e855bb1fb3f1e82f0 232 PANTHER PTHR30352:SF9 1 231 8.5E-117 T 23-04-2016 CLI_RS16360 c4981c719200b87e855bb1fb3f1e82f0 232 ProSitePatterns PS01087 Radical activating enzymes signature. 15 36 - T 23-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLI_RS16360 c4981c719200b87e855bb1fb3f1e82f0 232 Pfam PF13353 4Fe-4S single cluster domain 13 131 2.1E-23 T 23-04-2016 CLI_RS16360 c4981c719200b87e855bb1fb3f1e82f0 232 SUPERFAMILY SSF102114 21 207 1.65E-27 T 23-04-2016 CLI_RS16360 c4981c719200b87e855bb1fb3f1e82f0 232 PANTHER PTHR30352 1 231 8.5E-117 T 23-04-2016 CLI_RS16360 c4981c719200b87e855bb1fb3f1e82f0 232 Gene3D G3DSA:3.80.30.10 66 230 1.6E-60 T 23-04-2016 CLI_RS07290 30f2ca479a6e4f43d52f2f78145df79b 392 SUPERFAMILY SSF53383 1 390 6.05E-104 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS07290 30f2ca479a6e4f43d52f2f78145df79b 392 Pfam PF00155 Aminotransferase class I and II 36 384 5.9E-42 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS07290 30f2ca479a6e4f43d52f2f78145df79b 392 PANTHER PTHR11751 4 390 3.9E-152 T 23-04-2016 CLI_RS07290 30f2ca479a6e4f43d52f2f78145df79b 392 PANTHER PTHR11751:SF21 4 390 3.9E-152 T 23-04-2016 CLI_RS07290 30f2ca479a6e4f43d52f2f78145df79b 392 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 388 2.5E-147 T 23-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CLI_RS07290 30f2ca479a6e4f43d52f2f78145df79b 392 Gene3D G3DSA:3.40.640.10 45 255 8.2E-55 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS07290 30f2ca479a6e4f43d52f2f78145df79b 392 Gene3D G3DSA:3.90.1150.10 256 389 2.9E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS07840 86602cbe8e88c9229bbc53f582390e4b 690 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 479 666 1.3E-44 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS07840 86602cbe8e88c9229bbc53f582390e4b 690 SMART SM00283 414 689 1.7E-60 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS07840 86602cbe8e88c9229bbc53f582390e4b 690 Pfam PF00672 HAMP domain 311 381 9.6E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS07840 86602cbe8e88c9229bbc53f582390e4b 690 Gene3D G3DSA:3.30.450.20 191 288 3.8E-7 T 23-04-2016 CLI_RS07840 86602cbe8e88c9229bbc53f582390e4b 690 SUPERFAMILY SSF58104 420 689 1.44E-64 T 23-04-2016 CLI_RS07840 86602cbe8e88c9229bbc53f582390e4b 690 SUPERFAMILY SSF58104 360 387 1.44E-64 T 23-04-2016 CLI_RS07840 86602cbe8e88c9229bbc53f582390e4b 690 SMART SM00304 330 385 4.7E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS07840 86602cbe8e88c9229bbc53f582390e4b 690 PANTHER PTHR32089:SF1 3 690 2.1E-140 T 23-04-2016 CLI_RS07840 86602cbe8e88c9229bbc53f582390e4b 690 Pfam PF02743 Cache domain 37 292 6.4E-30 T 23-04-2016 IPR033479 Double Cache domain 1 CLI_RS07840 86602cbe8e88c9229bbc53f582390e4b 690 PANTHER PTHR32089 3 690 2.1E-140 T 23-04-2016 CLI_RS07840 86602cbe8e88c9229bbc53f582390e4b 690 Gene3D G3DSA:3.30.450.20 102 190 3.5E-19 T 23-04-2016 CLI_RS07840 86602cbe8e88c9229bbc53f582390e4b 690 Gene3D G3DSA:1.10.287.950 429 642 9.3E-46 T 23-04-2016 CLI_RS14250 88f934fada4387085ece610ae5a69020 250 PANTHER PTHR30269 1 249 1.7E-133 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS14250 88f934fada4387085ece610ae5a69020 250 Pfam PF01925 Sulfite exporter TauE/SafE 8 243 1.7E-41 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS14250 88f934fada4387085ece610ae5a69020 250 PANTHER PTHR30269:SF13 1 249 1.7E-133 T 23-04-2016 CLI_RS14610 8891a94ea25d37bd73721e5a52dd6c92 295 Pfam PF10882 Bacterial PH domain 64 162 1.9E-32 T 23-04-2016 IPR027783 Bacterial Pleckstrin homology domain-related CLI_RS14610 8891a94ea25d37bd73721e5a52dd6c92 295 ProDom PD076125 CPE2006 TRANSMEMBRANE MEMBRANE CAC1301 1 291 3.0E-67 T 23-04-2016 IPR020482 Uncharacterised protein family CAC1301 CLI_RS08870 deffac316316d1f81005cdfdc84b0843 228 PANTHER PTHR31272:SF1 10 225 4.1E-70 T 23-04-2016 CLI_RS08870 deffac316316d1f81005cdfdc84b0843 228 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 23 224 2.2E-33 T 23-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CLI_RS08870 deffac316316d1f81005cdfdc84b0843 228 PANTHER PTHR31272 10 225 4.1E-70 T 23-04-2016 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 Pfam PF09190 DALR domain 353 415 1.5E-18 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 Gene3D G3DSA:3.40.50.620 19 303 2.9E-111 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 SUPERFAMILY SSF47323 314 463 1.44E-36 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 SMART SM00840 353 416 1.9E-19 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 465 38.968 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 8.9E-30 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 220 241 8.9E-30 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 189 207 8.9E-30 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 8.9E-30 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 PANTHER PTHR10890 2 463 3.4E-248 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 311 4.2E-135 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 464 1.5E-182 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 SUPERFAMILY SSF52374 2 309 2.68E-102 T 23-04-2016 CLI_RS17960 2e1371149d9cf6c132f9c0ca0bf5c2c4 465 Gene3D G3DSA:1.20.120.640 305 406 2.0E-24 T 23-04-2016 CLI_RS14575 ecb628c36f6e1e0a4f3f28587a286869 250 PANTHER PTHR23344 1 239 2.6E-89 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 CLI_RS14575 ecb628c36f6e1e0a4f3f28587a286869 250 PANTHER PTHR23344:SF25 1 239 2.6E-89 T 23-04-2016 CLI_RS14575 ecb628c36f6e1e0a4f3f28587a286869 250 SUPERFAMILY SSF51695 3 239 7.33E-82 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CLI_RS14575 ecb628c36f6e1e0a4f3f28587a286869 250 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 9 234 3.1E-48 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CLI_RS14575 ecb628c36f6e1e0a4f3f28587a286869 250 Gene3D G3DSA:3.20.20.190 3 245 1.6E-84 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CLI_RS02850 06f47a44727cc32f98b895d8bb3fb980 154 SUPERFAMILY SSF46785 8 68 5.17E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02850 06f47a44727cc32f98b895d8bb3fb980 154 PANTHER PTHR30154 1 154 4.5E-58 T 23-04-2016 CLI_RS02850 06f47a44727cc32f98b895d8bb3fb980 154 Gene3D G3DSA:1.10.10.10 7 58 1.4E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02850 06f47a44727cc32f98b895d8bb3fb980 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 6.2E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLI_RS02850 06f47a44727cc32f98b895d8bb3fb980 154 Gene3D G3DSA:3.30.70.920 71 147 6.8E-24 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLI_RS02850 06f47a44727cc32f98b895d8bb3fb980 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 2.4E-9 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLI_RS02850 06f47a44727cc32f98b895d8bb3fb980 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 2.4E-9 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLI_RS02850 06f47a44727cc32f98b895d8bb3fb980 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 2.4E-9 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLI_RS02850 06f47a44727cc32f98b895d8bb3fb980 154 SUPERFAMILY SSF54909 69 151 3.89E-20 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel CLI_RS02850 06f47a44727cc32f98b895d8bb3fb980 154 SMART SM00344 8 115 7.2E-41 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CLI_RS02850 06f47a44727cc32f98b895d8bb3fb980 154 PANTHER PTHR30154:SF2 1 154 4.5E-58 T 23-04-2016 CLI_RS02850 06f47a44727cc32f98b895d8bb3fb980 154 Pfam PF01037 Lrp/AsnC ligand binding domain 74 146 1.8E-18 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLI_RS13710 ae76f29a8b9bc2597d7896f654d169b6 134 Pfam PF06949 Protein of unknown function (DUF1292) 70 133 2.1E-12 T 23-04-2016 IPR009711 Uncharacterised protein family UPF0473 CLI_RS02485 458ac6c62d3c7d09f73b9749a4a2ec36 242 PANTHER PTHR10108 76 121 4.7E-18 T 23-04-2016 CLI_RS02485 458ac6c62d3c7d09f73b9749a4a2ec36 242 PANTHER PTHR10108 139 210 4.7E-18 T 23-04-2016 CLI_RS02485 458ac6c62d3c7d09f73b9749a4a2ec36 242 Pfam PF13649 Methyltransferase domain 89 196 2.0E-18 T 23-04-2016 CLI_RS02485 458ac6c62d3c7d09f73b9749a4a2ec36 242 Gene3D G3DSA:3.40.50.150 76 207 8.1E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS02485 458ac6c62d3c7d09f73b9749a4a2ec36 242 SUPERFAMILY SSF53335 73 221 1.67E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS14360 b74c4e77256858306272719f0f0035ff 442 SUPERFAMILY SSF51556 59 348 1.72E-74 T 23-04-2016 IPR032466 Metal-dependent hydrolase CLI_RS14360 b74c4e77256858306272719f0f0035ff 442 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 2 442 1.4E-230 T 23-04-2016 IPR017700 Putative selenium metabolism protein SsnA CLI_RS14360 b74c4e77256858306272719f0f0035ff 442 Gene3D G3DSA:3.20.20.140 70 324 1.6E-63 T 23-04-2016 CLI_RS14360 b74c4e77256858306272719f0f0035ff 442 Gene3D G3DSA:2.30.40.10 1 69 1.1E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS14360 b74c4e77256858306272719f0f0035ff 442 PANTHER PTHR11271 1 440 4.7E-279 T 23-04-2016 CLI_RS14360 b74c4e77256858306272719f0f0035ff 442 Gene3D G3DSA:2.30.40.10 325 419 1.9E-28 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS14360 b74c4e77256858306272719f0f0035ff 442 PANTHER PTHR11271:SF40 1 440 4.7E-279 T 23-04-2016 CLI_RS14360 b74c4e77256858306272719f0f0035ff 442 SUPERFAMILY SSF51338 1 59 5.44E-35 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS14360 b74c4e77256858306272719f0f0035ff 442 SUPERFAMILY SSF51338 364 439 5.44E-35 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS14360 b74c4e77256858306272719f0f0035ff 442 Pfam PF01979 Amidohydrolase family 56 412 4.1E-45 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 SUPERFAMILY SSF47928 2 105 1.2E-22 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 23-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 PANTHER PTHR11910 1 179 2.6E-45 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 PRINTS PR00125 ATP synthase delta subunit signature 5 24 2.9E-23 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 PRINTS PR00125 ATP synthase delta subunit signature 85 99 2.9E-23 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 PRINTS PR00125 ATP synthase delta subunit signature 135 150 2.9E-23 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 PRINTS PR00125 ATP synthase delta subunit signature 74 85 2.9E-23 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 PRINTS PR00125 ATP synthase delta subunit signature 150 168 2.9E-23 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 177 19.523 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 Gene3D G3DSA:1.10.520.20 5 105 4.3E-19 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 174 9.6E-48 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 PANTHER PTHR11910:SF1 1 179 2.6E-45 T 23-04-2016 CLI_RS00905 e3950fa12781b7d364f1be8b327234d0 179 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 173 1.7E-39 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CLI_RS14985 5599976a2fe7559ddc058842b3ed420c 181 Gene3D G3DSA:1.10.530.10 28 180 4.0E-54 T 23-04-2016 CLI_RS14985 5599976a2fe7559ddc058842b3ed420c 181 PANTHER PTHR21666 15 179 2.9E-71 T 23-04-2016 CLI_RS14985 5599976a2fe7559ddc058842b3ed420c 181 PANTHER PTHR21666:SF196 15 179 2.9E-71 T 23-04-2016 CLI_RS14985 5599976a2fe7559ddc058842b3ed420c 181 Pfam PF01464 Transglycosylase SLT domain 35 148 8.6E-32 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 CLI_RS14985 5599976a2fe7559ddc058842b3ed420c 181 SUPERFAMILY SSF53955 30 180 3.56E-47 T 23-04-2016 IPR023346 Lysozyme-like domain CLI_RS11550 055ed55097de42ad7eb954e6d2776b46 368 PANTHER PTHR34975:SF2 1 368 1.2E-149 T 23-04-2016 CLI_RS11550 055ed55097de42ad7eb954e6d2776b46 368 PANTHER PTHR34975 1 368 1.2E-149 T 23-04-2016 CLI_RS11550 055ed55097de42ad7eb954e6d2776b46 368 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 362 1.0E-91 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS11550 055ed55097de42ad7eb954e6d2776b46 368 Pfam PF03845 Spore germination protein 9 319 4.1E-56 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS08285 43fc49a84610ecda4fcb0e875faa0e8e 408 Pfam PF07690 Major Facilitator Superfamily 295 393 7.6E-9 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS08285 43fc49a84610ecda4fcb0e875faa0e8e 408 Pfam PF07690 Major Facilitator Superfamily 12 291 1.9E-28 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS08285 43fc49a84610ecda4fcb0e875faa0e8e 408 PANTHER PTHR11360 1 408 2.3E-79 T 23-04-2016 CLI_RS08285 43fc49a84610ecda4fcb0e875faa0e8e 408 Gene3D G3DSA:1.20.1250.20 7 188 9.7E-26 T 23-04-2016 CLI_RS08285 43fc49a84610ecda4fcb0e875faa0e8e 408 SUPERFAMILY SSF103473 4 397 2.49E-59 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS08285 43fc49a84610ecda4fcb0e875faa0e8e 408 Gene3D G3DSA:1.20.1250.20 225 396 8.7E-18 T 23-04-2016 CLI_RS08285 43fc49a84610ecda4fcb0e875faa0e8e 408 PANTHER PTHR11360:SF135 1 408 2.3E-79 T 23-04-2016 CLI_RS00665 de3051c446c7882c4fbc602b6d465f2e 460 PANTHER PTHR11228 63 431 1.0E-159 T 23-04-2016 CLI_RS00665 de3051c446c7882c4fbc602b6d465f2e 460 Pfam PF13353 4Fe-4S single cluster domain 122 206 1.1E-6 T 23-04-2016 CLI_RS00665 de3051c446c7882c4fbc602b6d465f2e 460 Gene3D G3DSA:3.20.20.70 111 392 9.1E-45 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS00665 de3051c446c7882c4fbc602b6d465f2e 460 SMART SM00729 113 308 0.0075 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS00665 de3051c446c7882c4fbc602b6d465f2e 460 PANTHER PTHR11228:SF19 63 431 1.0E-159 T 23-04-2016 CLI_RS00665 de3051c446c7882c4fbc602b6d465f2e 460 Pfam PF04055 Radical SAM superfamily 118 247 3.9E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS00665 de3051c446c7882c4fbc602b6d465f2e 460 SUPERFAMILY SSF102114 111 394 2.16E-52 T 23-04-2016 CLI_RS11545 c7b97f34919c144fd30052fbdaa7b375 171 Gene3D G3DSA:1.10.1740.10 7 105 7.9E-25 T 23-04-2016 CLI_RS11545 c7b97f34919c144fd30052fbdaa7b375 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 164 2.6E-29 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11545 c7b97f34919c144fd30052fbdaa7b375 171 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 35 65 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11545 c7b97f34919c144fd30052fbdaa7b375 171 SUPERFAMILY SSF88659 98 167 1.2E-7 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11545 c7b97f34919c144fd30052fbdaa7b375 171 Gene3D G3DSA:1.10.10.10 106 169 6.8E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11545 c7b97f34919c144fd30052fbdaa7b375 171 SUPERFAMILY SSF88946 7 89 3.77E-20 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11545 c7b97f34919c144fd30052fbdaa7b375 171 Pfam PF04542 Sigma-70 region 2 14 79 8.3E-19 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11545 c7b97f34919c144fd30052fbdaa7b375 171 PANTHER PTHR30173 6 169 2.4E-31 T 23-04-2016 CLI_RS01010 f60fc407bbf46435480103aa7af51fa8 225 SUPERFAMILY SSF53271 70 220 3.71E-25 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS01010 f60fc407bbf46435480103aa7af51fa8 225 Pfam PF00156 Phosphoribosyl transferase domain 133 219 2.9E-6 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS01010 f60fc407bbf46435480103aa7af51fa8 225 PANTHER PTHR11907 66 221 1.7E-43 T 23-04-2016 CLI_RS01010 f60fc407bbf46435480103aa7af51fa8 225 PANTHER PTHR11907:SF9 66 221 1.7E-43 T 23-04-2016 CLI_RS01010 f60fc407bbf46435480103aa7af51fa8 225 Gene3D G3DSA:3.40.50.2020 58 223 1.0E-26 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 PIRSF PIRSF017184 1 500 4.6E-141 T 23-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 Gene3D G3DSA:3.40.50.10260 1 216 1.7E-59 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 8 213 8.3E-48 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 SUPERFAMILY SSF64153 11 221 4.58E-56 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 SUPERFAMILY SSF53613 231 497 6.89E-73 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 Gene3D G3DSA:3.40.1190.20 230 497 2.6E-83 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 Pfam PF03853 YjeF-related protein N-terminus 26 191 2.2E-43 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 Pfam PF01256 Carbohydrate kinase 251 491 2.4E-62 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 PANTHER PTHR12592 1 497 4.2E-143 T 23-04-2016 CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 PANTHER PTHR12592:SF0 1 497 4.2E-143 T 23-04-2016 CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 212 24.531 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 233 495 4.3E-66 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CLI_RS17440 b69a9da74392f6fe21156bd380188941 500 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 227 499 22.052 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CLI_RS03950 c9036baef19081308f184ab373cc6cfb 202 Pfam PF06114 Domain of unknown function (DUF955) 100 180 1.3E-13 T 23-04-2016 IPR010359 HTH domain, IrrE-type CLI_RS14605 b08560559be9c979d9bafb27ca256c03 229 PIRSF PIRSF018637 1 229 3.6E-70 T 23-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 CLI_RS14605 b08560559be9c979d9bafb27ca256c03 229 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 20 223 3.4E-59 T 23-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 CLI_RS14605 b08560559be9c979d9bafb27ca256c03 229 SUPERFAMILY SSF53335 8 135 5.83E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS14605 b08560559be9c979d9bafb27ca256c03 229 PANTHER PTHR38451 1 229 7.9E-87 T 23-04-2016 CLI_RS14605 b08560559be9c979d9bafb27ca256c03 229 Gene3D G3DSA:3.40.50.150 4 111 1.6E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS18490 2b889f36a4e22dc7ec542c0859364c68 414 Gene3D G3DSA:3.40.50.2000 219 341 2.5E-19 T 23-04-2016 CLI_RS18490 2b889f36a4e22dc7ec542c0859364c68 414 PANTHER PTHR12526 99 338 5.6E-32 T 23-04-2016 CLI_RS18490 2b889f36a4e22dc7ec542c0859364c68 414 Pfam PF13439 Glycosyltransferase Family 4 16 210 2.0E-9 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLI_RS18490 2b889f36a4e22dc7ec542c0859364c68 414 SUPERFAMILY SSF53756 6 343 9.94E-52 T 23-04-2016 CLI_RS18490 2b889f36a4e22dc7ec542c0859364c68 414 Pfam PF00534 Glycosyl transferases group 1 214 344 4.8E-23 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CLI_RS06785 9ba8f7c52fe339e9caa732aeae2fea4a 230 SMART SM00448 2 112 2.6E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS06785 9ba8f7c52fe339e9caa732aeae2fea4a 230 Gene3D G3DSA:1.10.10.10 126 225 8.6E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06785 9ba8f7c52fe339e9caa732aeae2fea4a 230 SMART SM00862 146 223 7.9E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS06785 9ba8f7c52fe339e9caa732aeae2fea4a 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 222 3.5E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS06785 9ba8f7c52fe339e9caa732aeae2fea4a 230 Pfam PF00072 Response regulator receiver domain 4 113 7.2E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS06785 9ba8f7c52fe339e9caa732aeae2fea4a 230 PANTHER PTHR26402:SF50 2 225 1.6E-74 T 23-04-2016 CLI_RS06785 9ba8f7c52fe339e9caa732aeae2fea4a 230 Gene3D G3DSA:3.40.50.2300 2 120 2.3E-34 T 23-04-2016 CLI_RS06785 9ba8f7c52fe339e9caa732aeae2fea4a 230 SUPERFAMILY SSF52172 1 177 1.13E-35 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS06785 9ba8f7c52fe339e9caa732aeae2fea4a 230 PANTHER PTHR26402 2 225 1.6E-74 T 23-04-2016 CLI_RS08190 dbc85afef132a1b8a7499da61c46a8b0 112 Pfam PF12788 YmaF family 10 104 2.8E-40 T 23-04-2016 IPR024307 YmaF CLI_RS04845 8f712e229e30ae0325249e656a1a55b2 239 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 24 236 27.927 T 23-04-2016 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 UniPathway: UPA00148 CLI_RS04845 8f712e229e30ae0325249e656a1a55b2 239 PANTHER PTHR34229 25 236 7.0E-117 T 23-04-2016 CLI_RS04845 8f712e229e30ae0325249e656a1a55b2 239 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 24 231 1.8E-86 T 23-04-2016 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 UniPathway: UPA00148 CLI_RS04845 8f712e229e30ae0325249e656a1a55b2 239 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 25 231 1.3E-57 T 23-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 CLI_RS04845 8f712e229e30ae0325249e656a1a55b2 239 PANTHER PTHR34229:SF2 25 236 7.0E-117 T 23-04-2016 CLI_RS14770 ba9985d4581453194cd1eba22507b047 343 SUPERFAMILY SSF52540 16 215 2.2E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14770 ba9985d4581453194cd1eba22507b047 343 Gene3D G3DSA:3.40.50.300 8 147 6.8E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14770 ba9985d4581453194cd1eba22507b047 343 Gene3D G3DSA:1.20.272.20 232 326 2.7E-9 T 23-04-2016 CLI_RS14770 ba9985d4581453194cd1eba22507b047 343 Gene3D G3DSA:1.10.8.60 153 231 1.4E-5 T 23-04-2016 CLI_RS14770 ba9985d4581453194cd1eba22507b047 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 337 2.6E-50 T 23-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CLI_RS14770 ba9985d4581453194cd1eba22507b047 343 SUPERFAMILY SSF48019 222 338 5.67E-22 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 CLI_RS14770 ba9985d4581453194cd1eba22507b047 343 PANTHER PTHR34388 1 338 1.6E-70 T 23-04-2016 CLI_RS14770 ba9985d4581453194cd1eba22507b047 343 Pfam PF06144 DNA polymerase III, delta subunit 20 198 3.6E-38 T 23-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CLI_RS09485 f11e8ae0eb494f723caf01690168e9ac 408 PANTHER PTHR21499 1 360 9.7E-108 T 23-04-2016 CLI_RS09485 f11e8ae0eb494f723caf01690168e9ac 408 Gene3D G3DSA:3.40.50.720 2 141 6.5E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS09485 f11e8ae0eb494f723caf01690168e9ac 408 SUPERFAMILY SSF51735 1 151 6.3E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS09485 f11e8ae0eb494f723caf01690168e9ac 408 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 122 1.1E-18 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CLI_RS09485 f11e8ae0eb494f723caf01690168e9ac 408 Pfam PF00742 Homoserine dehydrogenase 130 308 3.3E-56 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS09485 f11e8ae0eb494f723caf01690168e9ac 408 Gene3D G3DSA:3.30.360.10 142 292 5.4E-47 T 23-04-2016 CLI_RS09485 f11e8ae0eb494f723caf01690168e9ac 408 SUPERFAMILY SSF55347 130 295 3.47E-43 T 23-04-2016 CLI_RS09485 f11e8ae0eb494f723caf01690168e9ac 408 PANTHER PTHR21499:SF2 1 360 9.7E-108 T 23-04-2016 CLI_RS09485 f11e8ae0eb494f723caf01690168e9ac 408 PIRSF PIRSF000098 1 404 2.2E-122 T 23-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS14225 48fc9c4a6a9a88d946b5934c578c5d68 265 SUPERFAMILY SSF48150 118 255 4.4E-17 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CLI_RS14225 48fc9c4a6a9a88d946b5934c578c5d68 265 Gene3D G3DSA:1.10.1670.10 184 255 4.6E-15 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLI_RS14225 48fc9c4a6a9a88d946b5934c578c5d68 265 SMART SM00525 236 256 3.4E-4 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 CLI_RS14225 48fc9c4a6a9a88d946b5934c578c5d68 265 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 237 253 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site CLI_RS09675 78803d999c6a87a12328bde7ebf3b6a3 576 Pfam PF05670 Domain of unknown function (DUF814) 460 547 2.2E-31 T 23-04-2016 IPR008532 Domain of unknown function DUF814 CLI_RS09675 78803d999c6a87a12328bde7ebf3b6a3 576 Gene3D G3DSA:2.30.310.10 1 167 1.6E-54 T 23-04-2016 CLI_RS09675 78803d999c6a87a12328bde7ebf3b6a3 576 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 453 2.4E-152 T 23-04-2016 CLI_RS09675 78803d999c6a87a12328bde7ebf3b6a3 576 PANTHER PTHR15239 430 568 3.2E-152 T 23-04-2016 CLI_RS09675 78803d999c6a87a12328bde7ebf3b6a3 576 PANTHER PTHR15239 1 412 3.2E-152 T 23-04-2016 CLI_RS09675 78803d999c6a87a12328bde7ebf3b6a3 576 Gene3D G3DSA:1.10.8.50 170 221 2.8E-5 T 23-04-2016 CLI_RS03170 0e0051ba9173370b0f3eaab4655fd4e9 154 Gene3D G3DSA:3.40.630.30 1 146 1.4E-28 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03170 0e0051ba9173370b0f3eaab4655fd4e9 154 PANTHER PTHR23091 1 146 4.5E-24 T 23-04-2016 CLI_RS03170 0e0051ba9173370b0f3eaab4655fd4e9 154 Pfam PF00583 Acetyltransferase (GNAT) family 60 144 1.6E-16 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS03170 0e0051ba9173370b0f3eaab4655fd4e9 154 SUPERFAMILY SSF55729 1 145 5.57E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS02325 44c56d22354d9b930fd3d23612dad31f 240 Pfam PF01553 Acyltransferase 59 183 8.3E-29 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CLI_RS02325 44c56d22354d9b930fd3d23612dad31f 240 Gene3D G3DSA:3.40.1130.10 58 225 3.5E-28 T 23-04-2016 CLI_RS02325 44c56d22354d9b930fd3d23612dad31f 240 SUPERFAMILY SSF69593 52 236 1.57E-42 T 23-04-2016 CLI_RS02325 44c56d22354d9b930fd3d23612dad31f 240 PANTHER PTHR10434 36 239 1.3E-52 T 23-04-2016 CLI_RS02325 44c56d22354d9b930fd3d23612dad31f 240 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 56 183 7.8E-33 T 23-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 CLI_RS02325 44c56d22354d9b930fd3d23612dad31f 240 SMART SM00563 72 186 1.7E-34 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CLI_RS13175 0451d699f925fbb55c3663137c79d301 558 Gene3D G3DSA:3.80.30.20 174 364 5.0E-36 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS13175 0451d699f925fbb55c3663137c79d301 558 PANTHER PTHR11918:SF64 4 367 5.9E-103 T 23-04-2016 CLI_RS13175 0451d699f925fbb55c3663137c79d301 558 SUPERFAMILY SSF52242 44 102 1.92E-5 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CLI_RS13175 0451d699f925fbb55c3663137c79d301 558 PANTHER PTHR11918 4 367 5.9E-103 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS13175 0451d699f925fbb55c3663137c79d301 558 SMART SM00729 173 386 1.6E-34 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS13175 0451d699f925fbb55c3663137c79d301 558 Pfam PF04055 Radical SAM superfamily 178 338 4.2E-18 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS13175 0451d699f925fbb55c3663137c79d301 558 Pfam PF13311 Protein of unknown function (DUF4080) 366 541 1.5E-44 T 23-04-2016 IPR025288 Domain of unknown function DUF4080 CLI_RS13175 0451d699f925fbb55c3663137c79d301 558 SUPERFAMILY SSF102114 163 374 3.27E-45 T 23-04-2016 CLI_RS13175 0451d699f925fbb55c3663137c79d301 558 Pfam PF02310 B12 binding domain 6 122 8.6E-20 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CLI_RS09750 5489a6c4230def3ad0e3600efa1c1e78 258 Pfam PF12679 ABC-2 family transporter protein 64 225 1.7E-7 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 CLI_RS10535 2f1363defac66611d59269a8eb30b1fd 294 PANTHER PTHR33941:SF3 1 127 6.1E-57 T 23-04-2016 CLI_RS10535 2f1363defac66611d59269a8eb30b1fd 294 PANTHER PTHR33941:SF3 145 213 6.1E-57 T 23-04-2016 CLI_RS10535 2f1363defac66611d59269a8eb30b1fd 294 SMART SM00877 2 80 1.3E-32 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS10535 2f1363defac66611d59269a8eb30b1fd 294 PANTHER PTHR33941 1 127 6.1E-57 T 23-04-2016 CLI_RS10535 2f1363defac66611d59269a8eb30b1fd 294 PANTHER PTHR33941 145 213 6.1E-57 T 23-04-2016 CLI_RS10535 2f1363defac66611d59269a8eb30b1fd 294 SUPERFAMILY SSF143414 1 96 5.76E-30 T 23-04-2016 CLI_RS10535 2f1363defac66611d59269a8eb30b1fd 294 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 48 1.0E-17 T 23-04-2016 CLI_RS10535 2f1363defac66611d59269a8eb30b1fd 294 Pfam PF00936 BMC domain 3 80 8.4E-25 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS01160 958b00b13d8aa8cae15b210866ae1033 138 SMART SM00116 74 121 4.9E-10 T 23-04-2016 IPR000644 CBS domain CLI_RS01160 958b00b13d8aa8cae15b210866ae1033 138 SMART SM00116 10 57 6.9E-12 T 23-04-2016 IPR000644 CBS domain CLI_RS01160 958b00b13d8aa8cae15b210866ae1033 138 SUPERFAMILY SSF54631 1 116 2.65E-36 T 23-04-2016 CLI_RS01160 958b00b13d8aa8cae15b210866ae1033 138 PANTHER PTHR11911 1 128 3.0E-55 T 23-04-2016 CLI_RS01160 958b00b13d8aa8cae15b210866ae1033 138 Pfam PF00571 CBS domain 3 53 3.4E-15 T 23-04-2016 IPR000644 CBS domain CLI_RS01160 958b00b13d8aa8cae15b210866ae1033 138 Pfam PF00571 CBS domain 67 117 2.3E-14 T 23-04-2016 IPR000644 CBS domain CLI_RS01160 958b00b13d8aa8cae15b210866ae1033 138 Gene3D G3DSA:3.10.580.10 1 116 2.9E-38 T 23-04-2016 CLI_RS01160 958b00b13d8aa8cae15b210866ae1033 138 PANTHER PTHR11911:SF104 1 128 3.0E-55 T 23-04-2016 CLI_RS00705 189d28504b0107d24305ae307a853639 334 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 13 326 4.6E-111 T 23-04-2016 IPR014255 Spore coat protein CotS CLI_RS00705 189d28504b0107d24305ae307a853639 334 PANTHER PTHR39179:SF1 7 330 4.6E-82 T 23-04-2016 CLI_RS00705 189d28504b0107d24305ae307a853639 334 Gene3D G3DSA:3.90.1200.10 91 322 8.3E-75 T 23-04-2016 CLI_RS00705 189d28504b0107d24305ae307a853639 334 PANTHER PTHR39179 7 330 4.6E-82 T 23-04-2016 CLI_RS00705 189d28504b0107d24305ae307a853639 334 Pfam PF01633 Choline/ethanolamine kinase 88 243 1.5E-12 T 23-04-2016 CLI_RS00705 189d28504b0107d24305ae307a853639 334 SUPERFAMILY SSF56112 9 329 1.01E-53 T 23-04-2016 IPR011009 Protein kinase-like domain CLI_RS00705 189d28504b0107d24305ae307a853639 334 Gene3D G3DSA:3.30.200.20 5 90 8.6E-25 T 23-04-2016 CLI_RS01760 12892fbe36d9585f8ddaaa1eef2f9760 342 PANTHER PTHR30472 2 342 6.5E-185 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS01760 12892fbe36d9585f8ddaaa1eef2f9760 342 PANTHER PTHR30472:SF1 2 342 6.5E-185 T 23-04-2016 CLI_RS01760 12892fbe36d9585f8ddaaa1eef2f9760 342 SUPERFAMILY SSF81345 14 334 6.54E-79 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS01760 12892fbe36d9585f8ddaaa1eef2f9760 342 Pfam PF01032 FecCD transport family 26 335 3.5E-91 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS01760 12892fbe36d9585f8ddaaa1eef2f9760 342 Gene3D G3DSA:1.10.3470.10 17 340 2.4E-99 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS06320 c50efe3dd32a8ae2bc05bfe651a4edb3 271 Pfam PF12146 Serine aminopeptidase, S33 45 255 9.2E-14 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 CLI_RS06320 c50efe3dd32a8ae2bc05bfe651a4edb3 271 SUPERFAMILY SSF53474 4 266 4.15E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS06320 c50efe3dd32a8ae2bc05bfe651a4edb3 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 3.8E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS06320 c50efe3dd32a8ae2bc05bfe651a4edb3 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 3.8E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS06320 c50efe3dd32a8ae2bc05bfe651a4edb3 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 3.8E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS06320 c50efe3dd32a8ae2bc05bfe651a4edb3 271 PANTHER PTHR10992:SF698 4 268 4.8E-54 T 23-04-2016 CLI_RS06320 c50efe3dd32a8ae2bc05bfe651a4edb3 271 PANTHER PTHR10992 4 268 4.8E-54 T 23-04-2016 CLI_RS06320 c50efe3dd32a8ae2bc05bfe651a4edb3 271 Gene3D G3DSA:3.40.50.1820 3 268 2.5E-51 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Pfam PF04565 RNA polymerase Rpb2, domain 3 489 557 3.9E-31 T 23-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Gene3D G3DSA:2.40.270.10 932 1060 1.5E-76 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Gene3D G3DSA:2.40.270.10 765 792 1.5E-76 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Pfam PF04561 RNA polymerase Rpb2, domain 2 363 430 8.7E-5 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 294 1.5E-24 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Pfam PF00562 RNA polymerase Rpb2, domain 6 696 1082 3.1E-164 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Pfam PF04560 RNA polymerase Rpb2, domain 7 1084 1158 2.6E-27 T 23-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Gene3D G3DSA:3.90.1100.10 20 140 5.6E-153 T 23-04-2016 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Gene3D G3DSA:3.90.1100.10 421 567 5.6E-153 T 23-04-2016 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Gene3D G3DSA:3.90.1100.10 637 691 5.6E-153 T 23-04-2016 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Gene3D G3DSA:2.40.50.150 799 931 1.7E-60 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Gene3D G3DSA:3.90.1110.10 396 420 3.9E-67 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Gene3D G3DSA:3.90.1110.10 142 295 3.9E-67 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 PANTHER PTHR20856 9 286 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 PANTHER PTHR20856 399 1164 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Pfam PF04563 RNA polymerase beta subunit 26 475 6.2E-29 T 23-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Gene3D G3DSA:2.30.150.10 568 634 2.9E-21 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 214 909 1.1E-302 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Gene3D G3DSA:2.40.50.100 695 764 8.8E-28 T 23-04-2016 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Pfam PF10385 RNA polymerase beta subunit external 1 domain 567 634 2.9E-22 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 ProSitePatterns PS01166 RNA polymerases beta chain signature. 935 947 - T 23-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 SUPERFAMILY SSF64484 398 1168 0.0 T 23-04-2016 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 SUPERFAMILY SSF64484 12 291 0.0 T 23-04-2016 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1160 12.545 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 PANTHER PTHR20856:SF20 9 286 0.0 T 23-04-2016 CLI_RS17880 0db5cf0c0fe52c9019e06027516a96e5 1234 PANTHER PTHR20856:SF20 399 1164 0.0 T 23-04-2016 CLI_RS18405 45b32693f0ba696c13ba201921005399 190 PANTHER PTHR30055:SF40 1 189 5.6E-77 T 23-04-2016 CLI_RS18405 45b32693f0ba696c13ba201921005399 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 3.1E-15 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS18405 45b32693f0ba696c13ba201921005399 190 Gene3D G3DSA:1.10.357.10 56 189 4.7E-39 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS18405 45b32693f0ba696c13ba201921005399 190 Gene3D G3DSA:1.10.10.60 3 55 7.7E-23 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS18405 45b32693f0ba696c13ba201921005399 190 Pfam PF16859 Bacterial transcriptional repressor C-terminal 74 183 9.6E-29 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS18405 45b32693f0ba696c13ba201921005399 190 PANTHER PTHR30055 1 189 5.6E-77 T 23-04-2016 CLI_RS18405 45b32693f0ba696c13ba201921005399 190 SUPERFAMILY SSF48498 78 189 3.39E-26 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS18405 45b32693f0ba696c13ba201921005399 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 4.6E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS18405 45b32693f0ba696c13ba201921005399 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 4.6E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS18405 45b32693f0ba696c13ba201921005399 190 SUPERFAMILY SSF46689 7 66 4.44E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS14535 82682e7aac1bf16cb4e6405714ea321b 170 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 159 4.0E-42 T 23-04-2016 CLI_RS14535 82682e7aac1bf16cb4e6405714ea321b 170 Pfam PF17099 Tryptophan transporter TrpP 2 163 1.1E-57 T 23-04-2016 IPR031360 Tryptophan transporter TrpP CLI_RS01565 1b954c98b4dac58541203ea68ae35e12 255 PANTHER PTHR30514 2 251 6.0E-75 T 23-04-2016 CLI_RS01565 1b954c98b4dac58541203ea68ae35e12 255 Pfam PF01380 SIS domain 118 216 1.4E-13 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CLI_RS01565 1b954c98b4dac58541203ea68ae35e12 255 SUPERFAMILY SSF53697 96 252 1.61E-25 T 23-04-2016 CLI_RS01565 1b954c98b4dac58541203ea68ae35e12 255 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 73 1.3E-19 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLI_RS01565 1b954c98b4dac58541203ea68ae35e12 255 Gene3D G3DSA:3.40.50.10490 63 252 5.0E-25 T 23-04-2016 CLI_RS01565 1b954c98b4dac58541203ea68ae35e12 255 SUPERFAMILY SSF46689 8 73 4.3E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS01565 1b954c98b4dac58541203ea68ae35e12 255 PANTHER PTHR30514:SF1 2 251 6.0E-75 T 23-04-2016 CLI_RS01565 1b954c98b4dac58541203ea68ae35e12 255 Gene3D G3DSA:1.10.10.10 9 62 5.8E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17665 094106762a9562886059d592600e093b 144 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 2.8E-59 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 CLI_RS17665 094106762a9562886059d592600e093b 144 Pfam PF00572 Ribosomal protein L13 14 138 7.3E-56 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CLI_RS17665 094106762a9562886059d592600e093b 144 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.628 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CLI_RS17665 094106762a9562886059d592600e093b 144 SUPERFAMILY SSF52161 4 142 6.41E-58 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 CLI_RS17665 094106762a9562886059d592600e093b 144 PIRSF PIRSF002181 1 143 1.8E-47 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CLI_RS17665 094106762a9562886059d592600e093b 144 PANTHER PTHR11545 1 143 1.5E-69 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CLI_RS17665 094106762a9562886059d592600e093b 144 Gene3D G3DSA:3.90.1180.10 4 141 8.0E-62 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 CLI_RS17665 094106762a9562886059d592600e093b 144 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 23-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CLI_RS04890 84fc3f62d5920293cce693eeeb9300ad 231 PANTHER PTHR10204:SF38 1 213 1.1E-29 T 23-04-2016 CLI_RS04890 84fc3f62d5920293cce693eeeb9300ad 231 Gene3D G3DSA:3.40.50.360 1 230 4.0E-33 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS04890 84fc3f62d5920293cce693eeeb9300ad 231 Pfam PF03358 NADPH-dependent FMN reductase 1 133 3.8E-14 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLI_RS04890 84fc3f62d5920293cce693eeeb9300ad 231 SUPERFAMILY SSF52218 1 185 2.62E-26 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS04890 84fc3f62d5920293cce693eeeb9300ad 231 PANTHER PTHR10204 1 213 1.1E-29 T 23-04-2016 CLI_RS18785 2cd56f4ff4aa291210c76215da6968e4 193 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 34 173 9.3E-68 T 23-04-2016 IPR009665 Protein of unknown function DUF1256 CLI_RS18785 2cd56f4ff4aa291210c76215da6968e4 193 SUPERFAMILY SSF53163 15 181 9.68E-52 T 23-04-2016 IPR023430 Peptidase HybD-like domain CLI_RS18785 2cd56f4ff4aa291210c76215da6968e4 193 Pfam PF06866 Protein of unknown function (DUF1256) 14 171 5.4E-65 T 23-04-2016 IPR009665 Protein of unknown function DUF1256 CLI_RS00780 a3248af9d6b8709f462c16ec4569aae0 456 Pfam PF14620 YpeB sporulation 17 378 3.5E-125 T 23-04-2016 IPR014239 Spore germination YpeB GO:0009847 CLI_RS00780 a3248af9d6b8709f462c16ec4569aae0 456 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 7 446 2.2E-156 T 23-04-2016 IPR014239 Spore germination YpeB GO:0009847 CLI_RS00780 a3248af9d6b8709f462c16ec4569aae0 456 Pfam PF03413 Peptidase propeptide and YPEB domain 383 438 6.7E-5 T 23-04-2016 IPR025711 PepSY domain CLI_RS18220 3f096da46fec68be64ad6d09bea091a8 511 Pfam PF01943 Polysaccharide biosynthesis protein 6 301 5.6E-37 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLI_RS18220 3f096da46fec68be64ad6d09bea091a8 511 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 354 497 7.6E-26 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLI_RS18220 3f096da46fec68be64ad6d09bea091a8 511 PANTHER PTHR30250 1 511 4.2E-203 T 23-04-2016 CLI_RS18220 3f096da46fec68be64ad6d09bea091a8 511 PIRSF PIRSF038958 1 511 1.7E-155 T 23-04-2016 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type CLI_RS18220 3f096da46fec68be64ad6d09bea091a8 511 PANTHER PTHR30250:SF6 1 511 4.2E-203 T 23-04-2016 CLI_RS04920 d486af722201858fbedf1225ba0bb60e 141 Pfam PF00583 Acetyltransferase (GNAT) family 47 120 7.3E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS04920 d486af722201858fbedf1225ba0bb60e 141 Gene3D G3DSA:3.40.630.30 45 140 1.2E-33 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04920 d486af722201858fbedf1225ba0bb60e 141 PANTHER PTHR23091 43 141 1.0E-19 T 23-04-2016 CLI_RS04920 d486af722201858fbedf1225ba0bb60e 141 PANTHER PTHR23091:SF259 43 141 1.0E-19 T 23-04-2016 CLI_RS04920 d486af722201858fbedf1225ba0bb60e 141 SUPERFAMILY SSF55729 1 140 1.16E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS08365 a0f0546b66693867e995f40c5abc2aad 323 Pfam PF02779 Transketolase, pyrimidine binding domain 3 179 2.0E-50 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CLI_RS08365 a0f0546b66693867e995f40c5abc2aad 323 PANTHER PTHR11624 1 323 1.5E-206 T 23-04-2016 IPR033247 Transketolase family CLI_RS08365 a0f0546b66693867e995f40c5abc2aad 323 SUPERFAMILY SSF52518 1 203 8.03E-70 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS08365 a0f0546b66693867e995f40c5abc2aad 323 PANTHER PTHR11624:SF78 1 323 1.5E-206 T 23-04-2016 CLI_RS08365 a0f0546b66693867e995f40c5abc2aad 323 Pfam PF02780 Transketolase, C-terminal domain 193 315 9.1E-41 T 23-04-2016 IPR033248 Transketolase, C-terminal domain CLI_RS08365 a0f0546b66693867e995f40c5abc2aad 323 SMART SM00861 4 179 6.4E-65 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CLI_RS08365 a0f0546b66693867e995f40c5abc2aad 323 Gene3D G3DSA:3.40.50.970 1 193 2.5E-83 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS08365 a0f0546b66693867e995f40c5abc2aad 323 SUPERFAMILY SSF52922 190 322 6.15E-41 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLI_RS08365 a0f0546b66693867e995f40c5abc2aad 323 Gene3D G3DSA:3.40.50.920 194 322 7.1E-45 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLI_RS10235 96fed20deb9338c3dcef29029a30f001 73 PIRSF PIRSF037246 1 73 3.3E-37 T 23-04-2016 IPR017154 Uncharacterised conserved protein UCP037246 CLI_RS10235 96fed20deb9338c3dcef29029a30f001 73 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 19 67 7.9E-12 T 23-04-2016 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0003713|GO:0006355 CLI_RS18475 a634038ee79242af0f654a9cf17a0857 458 SMART SM00876 262 369 2.1E-31 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CLI_RS18475 a634038ee79242af0f654a9cf17a0857 458 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 262 366 1.1E-21 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CLI_RS18475 a634038ee79242af0f654a9cf17a0857 458 SUPERFAMILY SSF102114 35 338 9.29E-45 T 23-04-2016 CLI_RS18475 a634038ee79242af0f654a9cf17a0857 458 PANTHER PTHR22976 1 403 4.1E-245 T 23-04-2016 CLI_RS18475 a634038ee79242af0f654a9cf17a0857 458 Pfam PF04055 Radical SAM superfamily 80 228 2.7E-8 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS18475 a634038ee79242af0f654a9cf17a0857 458 PANTHER PTHR22976:SF2 1 403 4.1E-245 T 23-04-2016 CLI_RS18475 a634038ee79242af0f654a9cf17a0857 458 TIGRFAM TIGR03955 rSAM_HydG: [FeFe] hydrogenase H-cluster radical SAM maturase HydG 2 457 6.2E-195 T 23-04-2016 IPR024007 [FeFe]-hydrogenase maturation HydG, radical SAM CLI_RS18475 a634038ee79242af0f654a9cf17a0857 458 Gene3D G3DSA:3.20.20.70 34 328 9.3E-42 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS07760 04dfa5aeeadd3aedb5a41812f06bd77b 163 PANTHER PTHR31423:SF4 1 163 2.3E-101 T 23-04-2016 CLI_RS07760 04dfa5aeeadd3aedb5a41812f06bd77b 163 Pfam PF04073 Aminoacyl-tRNA editing domain 24 150 9.4E-29 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLI_RS07760 04dfa5aeeadd3aedb5a41812f06bd77b 163 SUPERFAMILY SSF55826 4 162 1.96E-43 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLI_RS07760 04dfa5aeeadd3aedb5a41812f06bd77b 163 PANTHER PTHR31423 1 163 2.3E-101 T 23-04-2016 CLI_RS07760 04dfa5aeeadd3aedb5a41812f06bd77b 163 Gene3D G3DSA:3.90.960.10 2 161 2.6E-58 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLI_RS03265 84c8957ac2cc9c48c7baf1d3717d100a 227 PANTHER PTHR26402 3 227 3.1E-73 T 23-04-2016 CLI_RS03265 84c8957ac2cc9c48c7baf1d3717d100a 227 SMART SM00448 3 113 1.4E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS03265 84c8957ac2cc9c48c7baf1d3717d100a 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 2.2E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS03265 84c8957ac2cc9c48c7baf1d3717d100a 227 SUPERFAMILY SSF52172 2 126 1.18E-36 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS03265 84c8957ac2cc9c48c7baf1d3717d100a 227 Gene3D G3DSA:1.10.10.10 153 226 3.9E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03265 84c8957ac2cc9c48c7baf1d3717d100a 227 PANTHER PTHR26402:SF578 3 227 3.1E-73 T 23-04-2016 CLI_RS03265 84c8957ac2cc9c48c7baf1d3717d100a 227 Gene3D G3DSA:3.40.50.2300 3 152 1.9E-34 T 23-04-2016 CLI_RS03265 84c8957ac2cc9c48c7baf1d3717d100a 227 SMART SM00862 151 226 1.1E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS03265 84c8957ac2cc9c48c7baf1d3717d100a 227 Pfam PF00072 Response regulator receiver domain 5 113 1.3E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS03265 84c8957ac2cc9c48c7baf1d3717d100a 227 SUPERFAMILY SSF46894 133 226 2.32E-26 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS04045 eb1c5fe55f87263fa25a153c654e8a3e 182 Gene3D G3DSA:3.40.50.1240 18 139 5.7E-9 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CLI_RS04045 eb1c5fe55f87263fa25a153c654e8a3e 182 SUPERFAMILY SSF53254 15 152 6.6E-14 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CLI_RS18765 bf646720f6a0c7ebdd24942a19a9cde4 289 PANTHER PTHR30460 5 288 9.7E-94 T 23-04-2016 CLI_RS18765 bf646720f6a0c7ebdd24942a19a9cde4 289 Pfam PF00924 Mechanosensitive ion channel 84 280 1.0E-37 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CLI_RS18765 bf646720f6a0c7ebdd24942a19a9cde4 289 SUPERFAMILY SSF82689 191 286 4.05E-16 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CLI_RS18765 bf646720f6a0c7ebdd24942a19a9cde4 289 SUPERFAMILY SSF50182 124 186 5.89E-15 T 23-04-2016 IPR010920 LSM domain CLI_RS18765 bf646720f6a0c7ebdd24942a19a9cde4 289 Gene3D G3DSA:3.30.70.100 191 278 1.2E-10 T 23-04-2016 CLI_RS18765 bf646720f6a0c7ebdd24942a19a9cde4 289 Gene3D G3DSA:2.30.30.60 140 186 4.0E-14 T 23-04-2016 CLI_RS18765 bf646720f6a0c7ebdd24942a19a9cde4 289 SUPERFAMILY SSF82861 37 123 1.31E-5 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CLI_RS03375 ac29a93d4ea4dbf666f7a2feb88fc1ed 403 SUPERFAMILY SSF53187 2 218 3.43E-76 T 23-04-2016 CLI_RS03375 ac29a93d4ea4dbf666f7a2feb88fc1ed 403 SUPERFAMILY SSF53187 328 401 3.43E-76 T 23-04-2016 CLI_RS03375 ac29a93d4ea4dbf666f7a2feb88fc1ed 403 Pfam PF01546 Peptidase family M20/M25/M40 78 398 8.2E-27 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLI_RS03375 ac29a93d4ea4dbf666f7a2feb88fc1ed 403 Pfam PF07687 Peptidase dimerisation domain 205 303 8.3E-5 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS03375 ac29a93d4ea4dbf666f7a2feb88fc1ed 403 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 7 399 2.2E-113 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 CLI_RS03375 ac29a93d4ea4dbf666f7a2feb88fc1ed 403 PANTHER PTHR32494 1 403 4.8E-162 T 23-04-2016 CLI_RS03375 ac29a93d4ea4dbf666f7a2feb88fc1ed 403 PIRSF PIRSF001235 2 403 1.2E-120 T 23-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 CLI_RS03375 ac29a93d4ea4dbf666f7a2feb88fc1ed 403 PANTHER PTHR32494:SF5 1 403 4.8E-162 T 23-04-2016 CLI_RS03375 ac29a93d4ea4dbf666f7a2feb88fc1ed 403 Gene3D G3DSA:3.40.630.10 343 402 8.8E-96 T 23-04-2016 CLI_RS03375 ac29a93d4ea4dbf666f7a2feb88fc1ed 403 Gene3D G3DSA:3.40.630.10 2 220 8.8E-96 T 23-04-2016 CLI_RS03375 ac29a93d4ea4dbf666f7a2feb88fc1ed 403 SUPERFAMILY SSF55031 208 315 5.98E-21 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS03375 ac29a93d4ea4dbf666f7a2feb88fc1ed 403 Gene3D G3DSA:3.30.70.360 221 311 5.0E-26 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS11045 0a40bcf3b2c555bca4089dcd605b7f5c 334 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 329 32.233 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CLI_RS11045 0a40bcf3b2c555bca4089dcd605b7f5c 334 Gene3D G3DSA:3.40.718.10 3 327 5.3E-116 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CLI_RS11045 0a40bcf3b2c555bca4089dcd605b7f5c 334 PANTHER PTHR30004 2 334 1.4E-169 T 23-04-2016 CLI_RS11045 0a40bcf3b2c555bca4089dcd605b7f5c 334 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 327 3.4E-95 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CLI_RS11045 0a40bcf3b2c555bca4089dcd605b7f5c 334 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 325 9.7E-98 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CLI_RS11045 0a40bcf3b2c555bca4089dcd605b7f5c 334 SUPERFAMILY SSF53659 5 331 1.6E-96 T 23-04-2016 CLI_RS11045 0a40bcf3b2c555bca4089dcd605b7f5c 334 PANTHER PTHR30004:SF6 2 334 1.4E-169 T 23-04-2016 CLI_RS05730 8381c4cf186a2810125d63b21f1be35b 287 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 13 219 4.8E-63 T 23-04-2016 IPR003740 Uncharacterised membrane protein YitT CLI_RS05730 8381c4cf186a2810125d63b21f1be35b 287 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 225 279 6.6E-22 T 23-04-2016 IPR019264 Domain of unknown function DUF2179 CLI_RS05730 8381c4cf186a2810125d63b21f1be35b 287 PANTHER PTHR33545:SF7 1 284 2.9E-144 T 23-04-2016 CLI_RS05730 8381c4cf186a2810125d63b21f1be35b 287 PANTHER PTHR33545 1 284 2.9E-144 T 23-04-2016 CLI_RS05730 8381c4cf186a2810125d63b21f1be35b 287 PIRSF PIRSF006483 2 287 1.3E-95 T 23-04-2016 IPR003740 Uncharacterised membrane protein YitT CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 Pfam PF00563 EAL domain 646 880 1.2E-75 T 23-04-2016 IPR001633 EAL domain CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 SUPERFAMILY SSF55073 477 631 9.42E-43 T 23-04-2016 IPR029787 Nucleotide cyclase CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 PANTHER PTHR33121 213 225 2.3E-70 T 23-04-2016 CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 PANTHER PTHR33121:SF13 213 225 2.3E-70 T 23-04-2016 CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 Pfam PF00672 HAMP domain 264 332 2.7E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 Pfam PF00990 Diguanylate cyclase, GGDEF domain 472 624 1.3E-42 T 23-04-2016 IPR000160 GGDEF domain CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 PANTHER PTHR33121:SF13 592 888 2.3E-70 T 23-04-2016 CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 Gene3D G3DSA:3.30.70.270 473 638 9.1E-51 T 23-04-2016 CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 PANTHER PTHR33121 592 888 2.3E-70 T 23-04-2016 CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 SMART SM00304 283 336 0.0087 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 SUPERFAMILY SSF141868 645 889 1.44E-87 T 23-04-2016 IPR001633 EAL domain CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 471 629 2.5E-40 T 23-04-2016 IPR000160 GGDEF domain CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 Gene3D G3DSA:3.20.20.450 644 888 7.0E-96 T 23-04-2016 IPR001633 EAL domain CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 SMART SM00267 461 630 1.1E-50 T 23-04-2016 IPR000160 GGDEF domain CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 SMART SM00052 640 885 6.3E-107 T 23-04-2016 IPR001633 EAL domain CLI_RS01990 995cdb18a490124eaeb8492bc97cac00 892 Pfam PF05228 CHASE4 domain 53 199 5.0E-27 T 23-04-2016 IPR007892 CHASE4 CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 Gene3D G3DSA:3.90.870.10 2 209 2.1E-97 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 SUPERFAMILY SSF55821 3 203 2.52E-84 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 Pfam PF00925 GTP cyclohydrolase II 213 374 2.1E-76 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 PANTHER PTHR21327:SF6 1 401 1.6E-242 T 23-04-2016 CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 SUPERFAMILY SSF142695 205 375 2.09E-72 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 9 199 8.0E-85 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 200 1.4E-78 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 3 204 38.573 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 4 396 55.632 T 23-04-2016 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275|UniPathway: UPA00275 CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 PANTHER PTHR21327 1 401 1.6E-242 T 23-04-2016 CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 213 398 8.0E-84 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 205 400 43.205 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CLI_RS14260 cc3b6f85b15a1467d6fb02a346b0c5b3 401 PIRSF PIRSF001259 3 401 3.3E-185 T 23-04-2016 CLI_RS12255 f72527e4dbc0517de67145be9db81ab1 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 74 9.8E-35 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CLI_RS12255 f72527e4dbc0517de67145be9db81ab1 77 Hamap MF_01217 Acyl carrier protein [acpP]. 1 75 23.244 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CLI_RS12255 f72527e4dbc0517de67145be9db81ab1 77 PANTHER PTHR20863 2 76 4.7E-28 T 23-04-2016 CLI_RS12255 f72527e4dbc0517de67145be9db81ab1 77 Gene3D G3DSA:1.10.1200.10 2 75 3.1E-33 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS12255 f72527e4dbc0517de67145be9db81ab1 77 Pfam PF00550 Phosphopantetheine attachment site 4 71 3.4E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS12255 f72527e4dbc0517de67145be9db81ab1 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 74 7.0E-11 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CLI_RS12255 f72527e4dbc0517de67145be9db81ab1 77 SUPERFAMILY SSF47336 2 74 5.5E-24 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS12255 f72527e4dbc0517de67145be9db81ab1 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 30 45 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site CLI_RS04370 aa09cbe1f68249dc9434e19d84384764 117 PIRSF PIRSF006113 1 117 7.8E-37 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CLI_RS04370 aa09cbe1f68249dc9434e19d84384764 117 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 89 1.1E-30 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CLI_RS04370 aa09cbe1f68249dc9434e19d84384764 117 Gene3D G3DSA:3.30.479.10 1 116 5.4E-39 T 23-04-2016 CLI_RS04370 aa09cbe1f68249dc9434e19d84384764 117 SUPERFAMILY SSF55620 1 115 1.06E-38 T 23-04-2016 CLI_RS04370 aa09cbe1f68249dc9434e19d84384764 117 PANTHER PTHR12589 1 117 3.0E-45 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CLI_RS04370 aa09cbe1f68249dc9434e19d84384764 117 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 116 4.7E-37 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CLI_RS08810 741228667212aecd479b73983ec20771 638 Gene3D G3DSA:2.40.50.140 557 636 3.8E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08810 741228667212aecd479b73983ec20771 638 PRINTS PR00681 Ribosomal protein S1 signature 411 428 2.5E-38 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS08810 741228667212aecd479b73983ec20771 638 PRINTS PR00681 Ribosomal protein S1 signature 499 520 2.5E-38 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS08810 741228667212aecd479b73983ec20771 638 PRINTS PR00681 Ribosomal protein S1 signature 369 388 2.5E-38 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS08810 741228667212aecd479b73983ec20771 638 PRINTS PR00681 Ribosomal protein S1 signature 321 335 2.5E-38 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS08810 741228667212aecd479b73983ec20771 638 PRINTS PR00681 Ribosomal protein S1 signature 303 321 2.5E-38 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS08810 741228667212aecd479b73983ec20771 638 PRINTS PR00681 Ribosomal protein S1 signature 616 634 2.5E-38 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS08810 741228667212aecd479b73983ec20771 638 PRINTS PR00681 Ribosomal protein S1 signature 577 596 2.5E-38 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS08810 741228667212aecd479b73983ec20771 638 SMART SM00316 388 458 0.33 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS08810 741228667212aecd479b73983ec20771 638 SMART SM00316 562 633 5.9E-25 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS08810 741228667212aecd479b73983ec20771 638 SMART SM00316 301 372 6.1E-16 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS08810 741228667212aecd479b73983ec20771 638 SMART SM00316 477 547 3.9E-28 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS08810 741228667212aecd479b73983ec20771 638 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 279 32.398 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CLI_RS08810 741228667212aecd479b73983ec20771 638 PANTHER PTHR30426 1 432 7.6E-158 T 23-04-2016 CLI_RS08810 741228667212aecd479b73983ec20771 638 Pfam PF00575 S1 RNA binding domain 476 547 2.9E-22 T 23-04-2016 IPR003029 S1 domain GO:0003676 CLI_RS08810 741228667212aecd479b73983ec20771 638 Pfam PF00575 S1 RNA binding domain 302 372 1.0E-10 T 23-04-2016 IPR003029 S1 domain GO:0003676 CLI_RS08810 741228667212aecd479b73983ec20771 638 Pfam PF00575 S1 RNA binding domain 561 633 1.6E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 CLI_RS08810 741228667212aecd479b73983ec20771 638 SUPERFAMILY SSF50249 288 397 2.79E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08810 741228667212aecd479b73983ec20771 638 SUPERFAMILY SSF50249 547 635 9.81E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08810 741228667212aecd479b73983ec20771 638 SUPERFAMILY SSF50249 379 458 3.63E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08810 741228667212aecd479b73983ec20771 638 SUPERFAMILY SSF50249 477 564 4.1E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08810 741228667212aecd479b73983ec20771 638 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 276 3.0E-96 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CLI_RS08810 741228667212aecd479b73983ec20771 638 Gene3D G3DSA:2.40.50.140 381 458 2.6E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08810 741228667212aecd479b73983ec20771 638 Gene3D G3DSA:2.40.50.140 481 556 8.5E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08810 741228667212aecd479b73983ec20771 638 Gene3D G3DSA:2.40.50.140 291 373 2.0E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08810 741228667212aecd479b73983ec20771 638 Pfam PF02401 LytB protein 3 275 4.7E-91 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CLI_RS12055 231d5d8f007b2cb80f3ee6c88a133b03 120 PANTHER PTHR33515 1 116 1.7E-47 T 23-04-2016 CLI_RS12055 231d5d8f007b2cb80f3ee6c88a133b03 120 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 91 1.0E-31 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CLI_RS12055 231d5d8f007b2cb80f3ee6c88a133b03 120 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 7.9E-35 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CLI_RS12055 231d5d8f007b2cb80f3ee6c88a133b03 120 ProSitePatterns PS01319 Ribosome-binding factor A signature. 75 96 - T 23-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CLI_RS12055 231d5d8f007b2cb80f3ee6c88a133b03 120 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 116 23.509 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CLI_RS12055 231d5d8f007b2cb80f3ee6c88a133b03 120 Pfam PF02033 Ribosome-binding factor A 5 109 2.5E-31 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CLI_RS12055 231d5d8f007b2cb80f3ee6c88a133b03 120 SUPERFAMILY SSF89919 2 112 1.7E-34 T 23-04-2016 IPR023799 Ribosome-binding factor A domain CLI_RS12055 231d5d8f007b2cb80f3ee6c88a133b03 120 Gene3D G3DSA:3.30.300.20 1 116 4.0E-39 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CLI_RS12175 2f1f087f329862d5da1d3962641c845d 123 Gene3D G3DSA:3.40.1350.10 11 122 1.6E-34 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CLI_RS12175 2f1f087f329862d5da1d3962641c845d 123 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 116 23.176 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 CLI_RS12175 2f1f087f329862d5da1d3962641c845d 123 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 6 119 1.5E-24 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 CLI_RS12175 2f1f087f329862d5da1d3962641c845d 123 SUPERFAMILY SSF52980 11 109 2.57E-25 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CLI_RS12175 2f1f087f329862d5da1d3962641c845d 123 Pfam PF02021 Uncharacterised protein family UPF0102 12 103 8.0E-29 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 CLI_RS12175 2f1f087f329862d5da1d3962641c845d 123 PANTHER PTHR34039 1 121 2.0E-42 T 23-04-2016 CLI_RS12175 2f1f087f329862d5da1d3962641c845d 123 PANTHER PTHR34039:SF1 1 121 2.0E-42 T 23-04-2016 CLI_RS09420 bb7a991ef47c7f422c389f9c79836df7 221 SUPERFAMILY SSF47413 11 59 1.85E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS09420 bb7a991ef47c7f422c389f9c79836df7 221 Gene3D G3DSA:1.10.260.40 8 58 1.9E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS09420 bb7a991ef47c7f422c389f9c79836df7 221 SMART SM00530 3 58 8.2E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS09420 bb7a991ef47c7f422c389f9c79836df7 221 Pfam PF01381 Helix-turn-helix 11 58 1.4E-8 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS09855 9af21813b2207aab98741b3f8c8bc718 440 Pfam PF01554 MatE 23 183 1.7E-32 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS09855 9af21813b2207aab98741b3f8c8bc718 440 Pfam PF01554 MatE 248 407 4.2E-24 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS09855 9af21813b2207aab98741b3f8c8bc718 440 PANTHER PTHR11206:SF107 5 440 1.6E-191 T 23-04-2016 CLI_RS09855 9af21813b2207aab98741b3f8c8bc718 440 PIRSF PIRSF006603 1 440 1.5E-106 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS09855 9af21813b2207aab98741b3f8c8bc718 440 PANTHER PTHR11206 5 440 1.6E-191 T 23-04-2016 CLI_RS09855 9af21813b2207aab98741b3f8c8bc718 440 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 418 1.7E-67 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS06975 0a19acf0323b6fd8dbdf9ae9b6d94655 228 PANTHER PTHR24567 1 221 2.6E-55 T 23-04-2016 CLI_RS06975 0a19acf0323b6fd8dbdf9ae9b6d94655 228 Gene3D G3DSA:2.60.120.10 18 144 2.7E-28 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS06975 0a19acf0323b6fd8dbdf9ae9b6d94655 228 Gene3D G3DSA:1.10.10.10 147 222 3.4E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06975 0a19acf0323b6fd8dbdf9ae9b6d94655 228 SMART SM00419 167 215 3.7E-7 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS06975 0a19acf0323b6fd8dbdf9ae9b6d94655 228 PANTHER PTHR24567:SF30 1 221 2.6E-55 T 23-04-2016 CLI_RS06975 0a19acf0323b6fd8dbdf9ae9b6d94655 228 SMART SM00100 7 129 1.8E-12 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CLI_RS06975 0a19acf0323b6fd8dbdf9ae9b6d94655 228 SUPERFAMILY SSF51206 16 143 4.84E-30 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CLI_RS06975 0a19acf0323b6fd8dbdf9ae9b6d94655 228 SUPERFAMILY SSF46785 147 224 2.72E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06975 0a19acf0323b6fd8dbdf9ae9b6d94655 228 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 4.2E-18 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CLI_RS06975 0a19acf0323b6fd8dbdf9ae9b6d94655 228 Pfam PF13545 Crp-like helix-turn-helix domain 150 221 2.8E-14 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS06165 2040a7f91683e241426f9394ecc45da6 447 PANTHER PTHR40448:SF1 5 447 4.4E-123 T 23-04-2016 CLI_RS06165 2040a7f91683e241426f9394ecc45da6 447 SUPERFAMILY SSF55874 311 429 1.57E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06165 2040a7f91683e241426f9394ecc45da6 447 PANTHER PTHR40448 5 447 4.4E-123 T 23-04-2016 CLI_RS06165 2040a7f91683e241426f9394ecc45da6 447 Gene3D G3DSA:3.30.565.10 311 421 5.5E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06165 2040a7f91683e241426f9394ecc45da6 447 Pfam PF14501 GHKL domain 340 444 6.9E-17 T 23-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 Gene3D G3DSA:3.20.20.70 2 401 1.2E-110 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 Gene3D G3DSA:3.50.50.60 541 631 1.5E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 PANTHER PTHR22893:SF66 1 447 2.8E-295 T 23-04-2016 CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 407 426 2.0E-17 T 23-04-2016 CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 489 507 2.0E-17 T 23-04-2016 CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 527 545 2.0E-17 T 23-04-2016 CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 613 629 2.0E-17 T 23-04-2016 CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 Gene3D G3DSA:3.40.50.720 402 540 1.8E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 PANTHER PTHR22893 1 447 2.8E-295 T 23-04-2016 CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 405 638 2.2E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 360 5.5E-63 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 SUPERFAMILY SSF51395 5 391 1.28E-90 T 23-04-2016 CLI_RS10835 a6cb72d4717fe3397e0b333a3ad007c0 665 SUPERFAMILY SSF51905 375 665 1.07E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS12930 875c2bc87dad71b59a694699e246e730 512 Gene3D G3DSA:2.30.38.10 329 401 9.8E-5 T 23-04-2016 CLI_RS12930 875c2bc87dad71b59a694699e246e730 512 SUPERFAMILY SSF56801 19 465 3.53E-40 T 23-04-2016 CLI_RS12930 875c2bc87dad71b59a694699e246e730 512 Gene3D G3DSA:3.40.50.980 159 317 4.4E-15 T 23-04-2016 CLI_RS12930 875c2bc87dad71b59a694699e246e730 512 PANTHER PTHR24096 9 176 3.0E-30 T 23-04-2016 CLI_RS12930 875c2bc87dad71b59a694699e246e730 512 PANTHER PTHR24096 194 482 3.0E-30 T 23-04-2016 CLI_RS12930 875c2bc87dad71b59a694699e246e730 512 Gene3D G3DSA:3.40.50.980 20 158 2.2E-6 T 23-04-2016 CLI_RS12930 875c2bc87dad71b59a694699e246e730 512 Pfam PF00501 AMP-binding enzyme 29 406 3.8E-31 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CLI_RS01550 18af690612f599e1ed3b06755868ca8c 440 SUPERFAMILY SSF56176 12 194 8.88E-51 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLI_RS01550 18af690612f599e1ed3b06755868ca8c 440 Pfam PF08031 Berberine and berberine like 396 440 8.0E-12 T 23-04-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 CLI_RS01550 18af690612f599e1ed3b06755868ca8c 440 PANTHER PTHR11748:SF86 3 439 1.9E-150 T 23-04-2016 CLI_RS01550 18af690612f599e1ed3b06755868ca8c 440 Gene3D G3DSA:3.30.465.10 82 194 2.2E-12 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLI_RS01550 18af690612f599e1ed3b06755868ca8c 440 PANTHER PTHR11748 3 439 1.9E-150 T 23-04-2016 CLI_RS01550 18af690612f599e1ed3b06755868ca8c 440 Pfam PF01565 FAD binding domain 27 160 3.8E-29 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CLI_RS01550 18af690612f599e1ed3b06755868ca8c 440 Gene3D G3DSA:3.30.43.10 13 81 2.2E-12 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CLI_RS06410 1aec2ce8fd40d09cedaf9f062c976bc5 246 Gene3D G3DSA:3.90.1720.10 133 198 3.1E-5 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS18575 6b1ac9e98eedb14c1989b5eb17bd7caf 74 Pfam PF00550 Phosphopantetheine attachment site 4 68 9.9E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS18575 6b1ac9e98eedb14c1989b5eb17bd7caf 74 Gene3D G3DSA:1.10.1200.10 2 72 1.4E-23 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS18575 6b1ac9e98eedb14c1989b5eb17bd7caf 74 Hamap MF_01217 Acyl carrier protein [acpP]. 1 72 18.322 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CLI_RS18575 6b1ac9e98eedb14c1989b5eb17bd7caf 74 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 72 2.0E-8 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CLI_RS18575 6b1ac9e98eedb14c1989b5eb17bd7caf 74 PANTHER PTHR20863 2 74 8.2E-17 T 23-04-2016 CLI_RS18575 6b1ac9e98eedb14c1989b5eb17bd7caf 74 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 71 4.0E-22 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CLI_RS18575 6b1ac9e98eedb14c1989b5eb17bd7caf 74 SUPERFAMILY SSF47336 2 73 3.01E-18 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS18350 4aad603370465f97dc6e6f5847fb071f 172 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 5 156 3.8E-47 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CLI_RS18350 4aad603370465f97dc6e6f5847fb071f 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 1.7E-18 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CLI_RS18350 4aad603370465f97dc6e6f5847fb071f 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.7E-18 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CLI_RS18350 4aad603370465f97dc6e6f5847fb071f 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 117 1.7E-18 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CLI_RS18350 4aad603370465f97dc6e6f5847fb071f 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 1.7E-18 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CLI_RS18350 4aad603370465f97dc6e6f5847fb071f 172 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CLI_RS18350 4aad603370465f97dc6e6f5847fb071f 172 PANTHER PTHR11071 15 158 6.1E-51 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CLI_RS18350 4aad603370465f97dc6e6f5847fb071f 172 Gene3D G3DSA:2.40.100.10 2 159 1.6E-55 T 23-04-2016 IPR029000 Cyclophilin-like domain CLI_RS18350 4aad603370465f97dc6e6f5847fb071f 172 PIRSF PIRSF001467 3 163 3.9E-39 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CLI_RS18350 4aad603370465f97dc6e6f5847fb071f 172 SUPERFAMILY SSF50891 4 158 6.72E-52 T 23-04-2016 IPR029000 Cyclophilin-like domain CLI_RS09655 e9041b525217b83234360710e85c2e09 509 PANTHER PTHR30258 33 509 5.1E-195 T 23-04-2016 CLI_RS09655 e9041b525217b83234360710e85c2e09 509 Gene3D G3DSA:3.30.450.90 119 242 3.1E-43 T 23-04-2016 CLI_RS09655 e9041b525217b83234360710e85c2e09 509 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 337 351 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CLI_RS09655 e9041b525217b83234360710e85c2e09 509 Pfam PF00437 Type II/IV secretion system protein 148 409 7.0E-78 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CLI_RS09655 e9041b525217b83234360710e85c2e09 509 SUPERFAMILY SSF160246 27 106 2.17E-13 T 23-04-2016 CLI_RS09655 e9041b525217b83234360710e85c2e09 509 Gene3D G3DSA:3.40.50.300 246 509 5.1E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09655 e9041b525217b83234360710e85c2e09 509 PANTHER PTHR30258:SF2 33 509 5.1E-195 T 23-04-2016 CLI_RS09655 e9041b525217b83234360710e85c2e09 509 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 28 108 5.4E-14 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CLI_RS09655 e9041b525217b83234360710e85c2e09 509 SUPERFAMILY SSF52540 122 470 1.74E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14150 b03ac0674e55e620aa9acf269aba2483 221 SUPERFAMILY SSF53098 52 215 1.31E-31 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS14150 b03ac0674e55e620aa9acf269aba2483 221 Pfam PF13276 HTH-like domain 1 35 2.5E-7 T 23-04-2016 IPR025948 HTH-like domain CLI_RS14150 b03ac0674e55e620aa9acf269aba2483 221 Pfam PF00665 Integrase core domain 61 172 3.6E-19 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CLI_RS14150 b03ac0674e55e620aa9acf269aba2483 221 Gene3D G3DSA:3.30.420.10 52 210 8.9E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS14150 b03ac0674e55e620aa9acf269aba2483 221 PANTHER PTHR32552 13 214 1.3E-31 T 23-04-2016 CLI_RS07620 1a83a5da4e7c6e9a0982daa825262eee 447 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 417 3.1E-122 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 CLI_RS07620 1a83a5da4e7c6e9a0982daa825262eee 447 Pfam PF00860 Permease family 15 390 2.2E-100 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS07620 1a83a5da4e7c6e9a0982daa825262eee 447 PANTHER PTHR11119:SF49 1 445 1.6E-198 T 23-04-2016 CLI_RS07620 1a83a5da4e7c6e9a0982daa825262eee 447 PANTHER PTHR11119 1 445 1.6E-198 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS07620 1a83a5da4e7c6e9a0982daa825262eee 447 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 337 357 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 CLI_RS15490 26fb52bf94bba3848e93c1ce69615457 621 SUPERFAMILY SSF53335 113 335 2.82E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS15490 26fb52bf94bba3848e93c1ce69615457 621 Pfam PF02719 Polysaccharide biosynthesis protein 296 578 9.9E-126 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CLI_RS15490 26fb52bf94bba3848e93c1ce69615457 621 Pfam PF13727 CoA-binding domain 63 248 9.7E-14 T 23-04-2016 CLI_RS15490 26fb52bf94bba3848e93c1ce69615457 621 Gene3D G3DSA:3.90.25.10 475 555 4.3E-6 T 23-04-2016 CLI_RS15490 26fb52bf94bba3848e93c1ce69615457 621 PANTHER PTHR10366:SF256 295 565 3.9E-126 T 23-04-2016 CLI_RS15490 26fb52bf94bba3848e93c1ce69615457 621 PANTHER PTHR10366 295 565 3.9E-126 T 23-04-2016 CLI_RS15490 26fb52bf94bba3848e93c1ce69615457 621 Gene3D G3DSA:3.40.50.720 150 259 7.1E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15490 26fb52bf94bba3848e93c1ce69615457 621 SUPERFAMILY SSF51735 294 557 1.21E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15490 26fb52bf94bba3848e93c1ce69615457 621 Gene3D G3DSA:3.40.50.720 294 474 4.4E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS02875 617c85ce7c902890130ef0a76d46b1d5 290 SMART SM00849 39 231 5.4E-6 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02875 617c85ce7c902890130ef0a76d46b1d5 290 PANTHER PTHR30619:SF1 2 288 1.1E-102 T 23-04-2016 CLI_RS02875 617c85ce7c902890130ef0a76d46b1d5 290 Gene3D G3DSA:3.60.15.10 27 261 6.2E-30 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02875 617c85ce7c902890130ef0a76d46b1d5 290 Pfam PF00753 Metallo-beta-lactamase superfamily 38 104 7.6E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02875 617c85ce7c902890130ef0a76d46b1d5 290 PANTHER PTHR30619 2 288 1.1E-102 T 23-04-2016 CLI_RS02875 617c85ce7c902890130ef0a76d46b1d5 290 SUPERFAMILY SSF56281 31 270 3.28E-45 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS06160 bf267f50a5dd14f6f24b0fd7023097d4 239 SMART SM00448 2 120 5.1E-11 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS06160 bf267f50a5dd14f6f24b0fd7023097d4 239 SMART SM00850 147 239 5.7E-25 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 CLI_RS06160 bf267f50a5dd14f6f24b0fd7023097d4 239 Pfam PF00072 Response regulator receiver domain 4 115 9.6E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS06160 bf267f50a5dd14f6f24b0fd7023097d4 239 SUPERFAMILY SSF52172 1 126 2.85E-13 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS06160 bf267f50a5dd14f6f24b0fd7023097d4 239 Gene3D G3DSA:3.40.50.2300 1 130 1.0E-15 T 23-04-2016 CLI_RS06160 bf267f50a5dd14f6f24b0fd7023097d4 239 PANTHER PTHR26402 2 239 4.9E-71 T 23-04-2016 CLI_RS06160 bf267f50a5dd14f6f24b0fd7023097d4 239 PANTHER PTHR26402:SF472 2 239 4.9E-71 T 23-04-2016 CLI_RS06160 bf267f50a5dd14f6f24b0fd7023097d4 239 Pfam PF04397 LytTr DNA-binding domain 148 237 9.9E-26 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 CLI_RS06160 bf267f50a5dd14f6f24b0fd7023097d4 239 Gene3D G3DSA:2.40.50.40 138 208 1.4E-20 T 23-04-2016 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 201 510 3.6E-159 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 Gene3D G3DSA:3.40.50.620 211 385 2.4E-60 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 Pfam PF00117 Glutamine amidotransferase class-I 8 188 7.1E-42 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 3.6E-6 T 23-04-2016 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 3.6E-6 T 23-04-2016 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 3.6E-6 T 23-04-2016 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 PANTHER PTHR11922:SF2 1 507 4.8E-296 T 23-04-2016 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 510 56.109 T 23-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 SUPERFAMILY SSF52402 181 432 1.57E-57 T 23-04-2016 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 PANTHER PTHR11922 1 507 4.8E-296 T 23-04-2016 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 Gene3D G3DSA:3.40.50.880 1 210 1.1E-63 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 Gene3D G3DSA:3.30.300.10 386 510 1.9E-53 T 23-04-2016 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 SUPERFAMILY SSF52317 5 198 1.64E-55 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 3.9E-5 T 23-04-2016 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 3.9E-5 T 23-04-2016 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 3.9E-5 T 23-04-2016 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 Pfam PF00958 GMP synthase C terminal domain 418 509 7.9E-45 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 Pfam PF02540 NAD synthase 205 276 3.3E-6 T 23-04-2016 IPR022310 NAD/GMP synthase CLI_RS16860 261ca38d13262f110b296a40b1d56832 510 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 192 1.6E-80 T 23-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CLI_RS11500 1b01b92fba713cd7aadca20733899a2b 257 Gene3D G3DSA:3.40.50.80 118 250 9.5E-32 T 23-04-2016 CLI_RS11500 1b01b92fba713cd7aadca20733899a2b 257 PANTHER PTHR22924 12 248 1.3E-64 T 23-04-2016 CLI_RS11500 1b01b92fba713cd7aadca20733899a2b 257 Pfam PF00175 Oxidoreductase NAD-binding domain 126 229 4.4E-14 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CLI_RS11500 1b01b92fba713cd7aadca20733899a2b 257 PRINTS PR00409 Phthalate dioxygenase reductase family signature 40 50 6.7E-12 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 CLI_RS11500 1b01b92fba713cd7aadca20733899a2b 257 PRINTS PR00409 Phthalate dioxygenase reductase family signature 103 117 6.7E-12 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 CLI_RS11500 1b01b92fba713cd7aadca20733899a2b 257 PRINTS PR00409 Phthalate dioxygenase reductase family signature 89 103 6.7E-12 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 CLI_RS11500 1b01b92fba713cd7aadca20733899a2b 257 PRINTS PR00409 Phthalate dioxygenase reductase family signature 125 144 6.7E-12 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 CLI_RS11500 1b01b92fba713cd7aadca20733899a2b 257 Pfam PF00970 Oxidoreductase FAD-binding domain 18 115 5.3E-10 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain CLI_RS11500 1b01b92fba713cd7aadca20733899a2b 257 SUPERFAMILY SSF63380 12 117 3.58E-22 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLI_RS11500 1b01b92fba713cd7aadca20733899a2b 257 PANTHER PTHR22924:SF49 12 248 1.3E-64 T 23-04-2016 CLI_RS11500 1b01b92fba713cd7aadca20733899a2b 257 SUPERFAMILY SSF52343 118 248 2.23E-31 T 23-04-2016 CLI_RS11500 1b01b92fba713cd7aadca20733899a2b 257 Gene3D G3DSA:2.40.30.10 12 117 9.8E-25 T 23-04-2016 CLI_RS03420 de56df90dd2bb0b41a651b2119eca9af 469 PANTHER PTHR11751 110 469 5.8E-208 T 23-04-2016 CLI_RS03420 de56df90dd2bb0b41a651b2119eca9af 469 Gene3D G3DSA:1.10.10.10 3 76 3.4E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03420 de56df90dd2bb0b41a651b2119eca9af 469 SUPERFAMILY SSF46785 4 83 1.59E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03420 de56df90dd2bb0b41a651b2119eca9af 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 2.7E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS03420 de56df90dd2bb0b41a651b2119eca9af 469 Pfam PF00155 Aminotransferase class I and II 140 434 1.4E-22 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS03420 de56df90dd2bb0b41a651b2119eca9af 469 SUPERFAMILY SSF53383 70 466 7.91E-85 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS03420 de56df90dd2bb0b41a651b2119eca9af 469 SMART SM00345 16 75 2.1E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS03420 de56df90dd2bb0b41a651b2119eca9af 469 Gene3D G3DSA:3.40.640.10 141 356 1.3E-56 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS03420 de56df90dd2bb0b41a651b2119eca9af 469 PANTHER PTHR11751:SF410 110 469 5.8E-208 T 23-04-2016 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 Gene3D G3DSA:3.40.630.10 225 431 9.7E-110 T 23-04-2016 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 Gene3D G3DSA:3.40.630.10 6 87 9.7E-110 T 23-04-2016 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 PANTHER PTHR28570 2 431 2.6E-194 T 23-04-2016 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 SUPERFAMILY SSF53187 216 430 3.96E-99 T 23-04-2016 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 SUPERFAMILY SSF53187 5 88 3.96E-99 T 23-04-2016 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 PANTHER PTHR28570:SF5 2 431 2.6E-194 T 23-04-2016 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 77 93 9.2E-44 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 308 324 9.2E-44 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 111 131 9.2E-44 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 397 412 9.2E-44 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 148 165 9.2E-44 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 265 283 9.2E-44 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 13 430 4.9E-135 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 Gene3D G3DSA:2.30.250.10 88 223 2.3E-46 T 23-04-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 CLI_RS17080 bf42898ccabea15acbdaa6779cd7b79b 432 SUPERFAMILY SSF101821 89 216 2.29E-36 T 23-04-2016 CLI_RS05815 1a18e4e4e15af0ec3b880c0ba1d49b6d 339 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS05815 1a18e4e4e15af0ec3b880c0ba1d49b6d 339 Gene3D G3DSA:3.40.50.300 3 233 3.8E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05815 1a18e4e4e15af0ec3b880c0ba1d49b6d 339 SUPERFAMILY SSF52540 4 243 1.15E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05815 1a18e4e4e15af0ec3b880c0ba1d49b6d 339 SUPERFAMILY SSF50331 237 338 1.08E-12 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal CLI_RS05815 1a18e4e4e15af0ec3b880c0ba1d49b6d 339 PANTHER PTHR24220 5 277 7.8E-117 T 23-04-2016 CLI_RS05815 1a18e4e4e15af0ec3b880c0ba1d49b6d 339 SMART SM00382 28 211 4.0E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS05815 1a18e4e4e15af0ec3b880c0ba1d49b6d 339 Pfam PF00005 ABC transporter 19 161 7.8E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS05815 1a18e4e4e15af0ec3b880c0ba1d49b6d 339 PANTHER PTHR24220:SF150 5 277 7.8E-117 T 23-04-2016 CLI_RS01875 46ace4c3daa45612492884729127d069 169 Gene3D G3DSA:3.40.630.30 4 153 3.8E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS01875 46ace4c3daa45612492884729127d069 169 Pfam PF13302 Acetyltransferase (GNAT) domain 14 146 1.0E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS01875 46ace4c3daa45612492884729127d069 169 SUPERFAMILY SSF55729 14 155 2.47E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS01875 46ace4c3daa45612492884729127d069 169 PANTHER PTHR13256 1 158 8.0E-42 T 23-04-2016 CLI_RS01875 46ace4c3daa45612492884729127d069 169 PANTHER PTHR13256:SF39 1 158 8.0E-42 T 23-04-2016 CLI_RS11385 51cde50c656deb3bcbcaf8248a999d97 327 Gene3D G3DSA:3.40.50.80 170 227 9.0E-5 T 23-04-2016 CLI_RS11385 51cde50c656deb3bcbcaf8248a999d97 327 SUPERFAMILY SSF52343 169 320 7.19E-10 T 23-04-2016 CLI_RS11385 51cde50c656deb3bcbcaf8248a999d97 327 Gene3D G3DSA:2.40.30.10 68 160 4.2E-13 T 23-04-2016 CLI_RS11385 51cde50c656deb3bcbcaf8248a999d97 327 Gene3D G3DSA:3.10.20.30 284 306 3.1E-4 T 23-04-2016 IPR012675 Beta-grasp domain CLI_RS11385 51cde50c656deb3bcbcaf8248a999d97 327 SUPERFAMILY SSF63380 66 161 2.46E-14 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLI_RS11385 51cde50c656deb3bcbcaf8248a999d97 327 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 290 298 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CLI_RS16140 542e13157a305bd956bd936a391dcd66 253 Gene3D G3DSA:3.40.50.300 4 210 4.5E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16140 542e13157a305bd956bd936a391dcd66 253 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS16140 542e13157a305bd956bd936a391dcd66 253 SUPERFAMILY SSF52540 5 218 8.83E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16140 542e13157a305bd956bd936a391dcd66 253 PANTHER PTHR24220:SF589 5 222 5.5E-104 T 23-04-2016 CLI_RS16140 542e13157a305bd956bd936a391dcd66 253 PANTHER PTHR24220 5 222 5.5E-104 T 23-04-2016 CLI_RS16140 542e13157a305bd956bd936a391dcd66 253 SMART SM00382 32 213 6.0E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS16140 542e13157a305bd956bd936a391dcd66 253 Pfam PF00005 ABC transporter 23 162 5.5E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 SUPERFAMILY SSF52540 614 914 2.72E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Gene3D G3DSA:3.40.50.300 480 597 7.0E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Gene3D G3DSA:3.40.50.300 821 939 1.7E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Gene3D G3DSA:3.40.50.300 607 692 1.7E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Gene3D G3DSA:3.40.50.300 7 90 7.0E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Gene3D G3DSA:1.20.1580.10 250 283 1.5E-57 T 23-04-2016 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Gene3D G3DSA:1.20.1580.10 409 479 1.5E-57 T 23-04-2016 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Gene3D G3DSA:1.20.1580.10 92 130 1.5E-57 T 23-04-2016 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 PANTHER PTHR32282:SF2 1 940 0.0 T 23-04-2016 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 PANTHER PTHR32282 1 940 0.0 T 23-04-2016 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 SUPERFAMILY SSF52540 10 206 1.52E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 SUPERFAMILY SSF52540 432 571 1.52E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Pfam PF00005 ABC transporter 790 860 4.9E-5 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Gene3D G3DSA:3.30.1490.20 131 154 9.0E-30 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Gene3D G3DSA:3.30.1490.20 202 249 9.0E-30 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 940 22.86 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 924 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Gene3D G3DSA:1.20.1580.10 694 820 1.5E-56 T 23-04-2016 CLI_RS17370 ded60631c4b349cd4932ce6829957e5a 940 Gene3D G3DSA:1.10.8.280 286 408 2.8E-36 T 23-04-2016 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 PANTHER PTHR33794 328 590 2.8E-211 T 23-04-2016 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 PANTHER PTHR33794 2 307 2.8E-211 T 23-04-2016 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 Pfam PF03413 Peptidase propeptide and YPEB domain 148 212 3.0E-8 T 23-04-2016 IPR025711 PepSY domain CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 433 584 2.3E-50 T 23-04-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 PANTHER PTHR33794:SF1 328 590 2.8E-211 T 23-04-2016 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 PANTHER PTHR33794:SF1 2 307 2.8E-211 T 23-04-2016 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 SUPERFAMILY SSF55486 258 585 1.26E-78 T 23-04-2016 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 85 133 8.7E-8 T 23-04-2016 IPR011096 FTP domain CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 Gene3D G3DSA:1.10.390.10 435 584 2.1E-51 T 23-04-2016 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 Gene3D G3DSA:3.10.170.10 262 433 6.8E-47 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 442 453 7.7E-18 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 383 403 7.7E-18 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 502 518 7.7E-18 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 421 437 7.7E-18 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07440 1199a861d4f3d60cc2e5603a29d52975 592 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 263 430 3.3E-46 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 469 3.1E-164 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 Gene3D G3DSA:2.120.10.90 494 803 8.4E-126 T 23-04-2016 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 Gene3D G3DSA:3.30.1360.40 235 329 8.3E-41 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 PANTHER PTHR10169:SF48 3 772 0.0 T 23-04-2016 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 SUPERFAMILY SSF101904 496 810 9.42E-110 T 23-04-2016 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 553 597 2.2E-9 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 656 701 1.7E-16 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 707 752 2.4E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 608 651 5.2E-9 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 503 548 3.5E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 756 802 1.9E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 SMART SM00434 10 462 5.9E-290 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 Gene3D G3DSA:3.90.199.10 33 215 2.7E-84 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 SUPERFAMILY SSF56719 30 485 5.1E-185 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 PANTHER PTHR10169 3 772 0.0 T 23-04-2016 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 Gene3D G3DSA:1.10.268.10 360 459 8.3E-39 T 23-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 806 30.016 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CLI_RS00040 3491d95d6891d57f58f62ba73df7ef59 831 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 7 803 0.0 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 SUPERFAMILY SSF55874 275 445 3.54E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 445 3.6E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 SMART SM00387 332 446 1.2E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 219 286 2.9E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 Gene3D G3DSA:1.10.287.130 215 270 3.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 SUPERFAMILY SSF47384 206 286 2.94E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 SMART SM00388 218 286 2.5E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 8.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 443 8.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 398 8.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 8.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 PANTHER PTHR24423 85 451 9.7E-63 T 23-04-2016 CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 PANTHER PTHR24423 9 24 9.7E-63 T 23-04-2016 CLI_RS05865 7b408d94a2e488858ad8e17029b86455 477 Gene3D G3DSA:3.30.565.10 271 448 1.7E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 Pfam PF13353 4Fe-4S single cluster domain 15 180 5.0E-12 T 23-04-2016 CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 Gene3D G3DSA:3.30.70.20 43 88 2.5E-9 T 23-04-2016 CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 PANTHER PTHR30352:SF13 1 58 5.5E-136 T 23-04-2016 CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 PANTHER PTHR30352:SF13 91 277 5.5E-136 T 23-04-2016 CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 SUPERFAMILY SSF102114 88 263 7.46E-18 T 23-04-2016 CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 SUPERFAMILY SSF102114 26 47 7.46E-18 T 23-04-2016 CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 SUPERFAMILY SSF54862 43 94 2.27E-12 T 23-04-2016 CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 45 56 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 4 277 2.6E-119 T 23-04-2016 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 ProSitePatterns PS01087 Radical activating enzymes signature. 17 38 - T 23-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 Gene3D G3DSA:3.80.30.10 111 277 1.8E-49 T 23-04-2016 CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 Pfam PF04055 Radical SAM superfamily 24 216 1.0E-21 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 PIRSF PIRSF000371 1 277 1.6E-73 T 23-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 PANTHER PTHR30352 1 58 5.5E-136 T 23-04-2016 CLI_RS18460 51142883d5e4a7dc347ee157c0a90ba6 278 PANTHER PTHR30352 91 277 5.5E-136 T 23-04-2016 CLI_RS16225 6ae2d8f09214179ab9c5cd70aa1d2a94 578 Pfam PF13519 von Willebrand factor type A domain 405 508 1.7E-9 T 23-04-2016 IPR002035 von Willebrand factor, type A CLI_RS16225 6ae2d8f09214179ab9c5cd70aa1d2a94 578 Gene3D G3DSA:3.40.50.410 405 535 1.4E-7 T 23-04-2016 IPR002035 von Willebrand factor, type A CLI_RS16225 6ae2d8f09214179ab9c5cd70aa1d2a94 578 SMART SM00327 402 575 9.9E-10 T 23-04-2016 IPR002035 von Willebrand factor, type A CLI_RS16225 6ae2d8f09214179ab9c5cd70aa1d2a94 578 SUPERFAMILY SSF53300 405 567 4.61E-14 T 23-04-2016 IPR002035 von Willebrand factor, type A CLI_RS16225 6ae2d8f09214179ab9c5cd70aa1d2a94 578 PANTHER PTHR36846 25 144 1.5E-137 T 23-04-2016 CLI_RS16225 6ae2d8f09214179ab9c5cd70aa1d2a94 578 PANTHER PTHR36846 164 578 1.5E-137 T 23-04-2016 CLI_RS13960 86b971c7afc9680b412fb411266369c6 305 SUPERFAMILY SSF56601 4 305 4.3E-117 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS13960 86b971c7afc9680b412fb411266369c6 305 Hamap MF_00313 Glutaminase [glsA]. 1 305 48.242 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 CLI_RS13960 86b971c7afc9680b412fb411266369c6 305 PANTHER PTHR12544 1 305 6.2E-165 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 CLI_RS13960 86b971c7afc9680b412fb411266369c6 305 TIGRFAM TIGR03814 Gln_ase: glutaminase A 5 305 8.4E-128 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 CLI_RS13960 86b971c7afc9680b412fb411266369c6 305 Gene3D G3DSA:3.40.710.10 2 305 4.8E-128 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS13960 86b971c7afc9680b412fb411266369c6 305 Pfam PF04960 Glutaminase 19 305 2.2E-122 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 CLI_RS12850 fd668d16598860c7d6ee57971022336d 397 SUPERFAMILY SSF53383 4 378 1.46E-111 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS12850 fd668d16598860c7d6ee57971022336d 397 Gene3D G3DSA:3.90.1150.10 250 376 6.5E-46 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS12850 fd668d16598860c7d6ee57971022336d 397 PANTHER PTHR11601 2 391 2.8E-207 T 23-04-2016 CLI_RS12850 fd668d16598860c7d6ee57971022336d 397 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 5 386 6.0E-188 T 23-04-2016 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CLI_RS12850 fd668d16598860c7d6ee57971022336d 397 Gene3D G3DSA:3.40.640.10 17 249 3.1E-93 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS12850 fd668d16598860c7d6ee57971022336d 397 PANTHER PTHR11601:SF38 2 391 2.8E-207 T 23-04-2016 CLI_RS12850 fd668d16598860c7d6ee57971022336d 397 Pfam PF00266 Aminotransferase class-V 5 369 7.0E-84 T 23-04-2016 IPR000192 Aminotransferase class V domain CLI_RS12850 fd668d16598860c7d6ee57971022336d 397 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLI_RS12850 fd668d16598860c7d6ee57971022336d 397 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 56.05 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 CLI_RS12850 fd668d16598860c7d6ee57971022336d 397 PIRSF PIRSF005572 2 384 4.4E-132 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CLI_RS01715 fe572f1a3784fd3ed04fc6ec6947a01c 763 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 66 224 1.2E-45 T 23-04-2016 CLI_RS01715 fe572f1a3784fd3ed04fc6ec6947a01c 763 PANTHER PTHR33908 13 260 5.9E-37 T 23-04-2016 CLI_RS01715 fe572f1a3784fd3ed04fc6ec6947a01c 763 PANTHER PTHR33908:SF3 13 260 5.9E-37 T 23-04-2016 CLI_RS11955 b5c59692397b5b63a9a907a8bfeb5552 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 9.0E-29 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CLI_RS11955 b5c59692397b5b63a9a907a8bfeb5552 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 23-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CLI_RS11955 b5c59692397b5b63a9a907a8bfeb5552 85 Gene3D G3DSA:3.30.1340.10 1 82 3.8E-29 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CLI_RS11955 b5c59692397b5b63a9a907a8bfeb5552 85 PANTHER PTHR33705 1 82 4.9E-33 T 23-04-2016 CLI_RS11955 b5c59692397b5b63a9a907a8bfeb5552 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 23-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CLI_RS11955 b5c59692397b5b63a9a907a8bfeb5552 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.5E-25 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CLI_RS11955 b5c59692397b5b63a9a907a8bfeb5552 85 PANTHER PTHR33705:SF2 1 82 4.9E-33 T 23-04-2016 CLI_RS11955 b5c59692397b5b63a9a907a8bfeb5552 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 9.4E-22 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CLI_RS11955 b5c59692397b5b63a9a907a8bfeb5552 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 9.4E-22 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CLI_RS11955 b5c59692397b5b63a9a907a8bfeb5552 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 9.4E-22 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CLI_RS11955 b5c59692397b5b63a9a907a8bfeb5552 85 SUPERFAMILY SSF55594 1 82 1.44E-24 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CLI_RS06555 e7b375d5551b535708c6783a53b8036b 388 PIRSF PIRSF036593 4 388 5.5E-188 T 23-04-2016 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit CLI_RS06555 e7b375d5551b535708c6783a53b8036b 388 Pfam PF02504 Fatty acid synthesis protein 31 366 2.9E-68 T 23-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 CLI_RS06555 e7b375d5551b535708c6783a53b8036b 388 Gene3D G3DSA:3.40.718.10 29 296 3.3E-35 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CLI_RS06555 e7b375d5551b535708c6783a53b8036b 388 SUPERFAMILY SSF53659 30 296 4.52E-27 T 23-04-2016 CLI_RS08780 52b3b27b8738e07824fc0ea001ba7565 450 Gene3D G3DSA:3.80.30.20 158 389 6.7E-88 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS08780 52b3b27b8738e07824fc0ea001ba7565 450 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 14 450 74.619 T 23-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CLI_RS08780 52b3b27b8738e07824fc0ea001ba7565 450 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 16 448 1.8E-176 T 23-04-2016 CLI_RS08780 52b3b27b8738e07824fc0ea001ba7565 450 PANTHER PTHR11918:SF43 3 450 5.0E-197 T 23-04-2016 CLI_RS08780 52b3b27b8738e07824fc0ea001ba7565 450 SUPERFAMILY SSF102114 154 382 3.27E-65 T 23-04-2016 CLI_RS08780 52b3b27b8738e07824fc0ea001ba7565 450 Pfam PF04055 Radical SAM superfamily 163 335 5.6E-34 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS08780 52b3b27b8738e07824fc0ea001ba7565 450 SMART SM00729 159 377 7.4E-66 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS08780 52b3b27b8738e07824fc0ea001ba7565 450 Pfam PF00919 Uncharacterized protein family UPF0004 16 116 1.1E-28 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CLI_RS08780 52b3b27b8738e07824fc0ea001ba7565 450 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 16 447 4.1E-160 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CLI_RS08780 52b3b27b8738e07824fc0ea001ba7565 450 PANTHER PTHR11918 3 450 5.0E-197 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS08780 52b3b27b8738e07824fc0ea001ba7565 450 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 163 183 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CLI_RS08780 52b3b27b8738e07824fc0ea001ba7565 450 Pfam PF01938 TRAM domain 388 448 3.9E-16 T 23-04-2016 IPR002792 TRAM domain CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 2 261 27.446 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 PANTHER PTHR20857:SF19 1 265 1.6E-86 T 23-04-2016 CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 PIRSF PIRSF000513 1 265 1.4E-74 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 Pfam PF02110 Hydroxyethylthiazole kinase family 6 252 6.4E-61 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 SUPERFAMILY SSF53613 6 262 4.21E-44 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 12 19 1.9E-27 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 113 127 1.9E-27 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 56 64 1.9E-27 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 82 99 1.9E-27 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 164 181 1.9E-27 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 25 46 1.9E-27 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 PANTHER PTHR20857 1 265 1.6E-86 T 23-04-2016 CLI_RS11275 3224ffd1e8bf9b1bb320918b53265487 265 Gene3D G3DSA:3.40.1190.20 1 263 1.6E-74 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS10135 a7321907ff2cdcea9d0e5b305e095eb7 92 Pfam PF03477 ATP cone domain 1 90 2.3E-10 T 23-04-2016 IPR005144 ATP-cone domain CLI_RS11230 c39af1d86130cf6cb5cfb3526bc336bd 482 PANTHER PTHR13847:SF150 2 439 2.1E-129 T 23-04-2016 CLI_RS11230 c39af1d86130cf6cb5cfb3526bc336bd 482 Gene3D G3DSA:3.50.50.60 1 82 5.6E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS11230 c39af1d86130cf6cb5cfb3526bc336bd 482 Gene3D G3DSA:3.50.50.60 314 370 5.6E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS11230 c39af1d86130cf6cb5cfb3526bc336bd 482 Gene3D G3DSA:3.50.50.60 139 216 5.6E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS11230 c39af1d86130cf6cb5cfb3526bc336bd 482 SUPERFAMILY SSF51905 1 217 1.94E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS11230 c39af1d86130cf6cb5cfb3526bc336bd 482 SUPERFAMILY SSF51905 314 370 1.94E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS11230 c39af1d86130cf6cb5cfb3526bc336bd 482 Pfam PF01266 FAD dependent oxidoreductase 3 350 3.8E-68 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CLI_RS11230 c39af1d86130cf6cb5cfb3526bc336bd 482 Gene3D G3DSA:3.30.9.10 86 138 1.5E-5 T 23-04-2016 CLI_RS11230 c39af1d86130cf6cb5cfb3526bc336bd 482 Gene3D G3DSA:3.30.9.10 217 311 1.5E-5 T 23-04-2016 CLI_RS11230 c39af1d86130cf6cb5cfb3526bc336bd 482 SUPERFAMILY SSF54373 218 311 3.73E-6 T 23-04-2016 CLI_RS11230 c39af1d86130cf6cb5cfb3526bc336bd 482 Pfam PF04324 BFD-like [2Fe-2S] binding domain 394 448 1.4E-16 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain CLI_RS11230 c39af1d86130cf6cb5cfb3526bc336bd 482 PANTHER PTHR13847 2 439 2.1E-129 T 23-04-2016 CLI_RS05855 8289e280dfcaa995eb17bb621ba88d2e 67 SUPERFAMILY SSF55008 3 66 4.19E-11 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS05855 8289e280dfcaa995eb17bb621ba88d2e 67 Pfam PF00403 Heavy-metal-associated domain 6 65 1.6E-7 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS05855 8289e280dfcaa995eb17bb621ba88d2e 67 Gene3D G3DSA:3.30.70.100 1 66 8.7E-12 T 23-04-2016 CLI_RS10960 aed43a544351481f7861b49040950e5b 521 PANTHER PTHR37814 2 383 3.3E-173 T 23-04-2016 CLI_RS10960 aed43a544351481f7861b49040950e5b 521 PANTHER PTHR37814:SF1 2 383 3.3E-173 T 23-04-2016 CLI_RS10675 3d2077e40973e626b086c27209e726a2 212 PANTHER PTHR33393:SF5 17 212 6.4E-63 T 23-04-2016 CLI_RS10675 3d2077e40973e626b086c27209e726a2 212 Gene3D G3DSA:2.40.260.10 78 210 7.6E-28 T 23-04-2016 IPR023365 Sortase domain CLI_RS10675 3d2077e40973e626b086c27209e726a2 212 PANTHER PTHR33393 17 212 6.4E-63 T 23-04-2016 CLI_RS10675 3d2077e40973e626b086c27209e726a2 212 Pfam PF04203 Sortase family 90 209 9.0E-26 T 23-04-2016 IPR005754 Sortase family CLI_RS10675 3d2077e40973e626b086c27209e726a2 212 SUPERFAMILY SSF63817 74 210 2.09E-34 T 23-04-2016 IPR023365 Sortase domain CLI_RS10675 3d2077e40973e626b086c27209e726a2 212 TIGRFAM TIGR01076 sortase_fam: sortase 86 205 4.1E-27 T 23-04-2016 IPR005754 Sortase family CLI_RS01815 f2c6693723c2018ef831650c1ad09f59 135 Gene3D G3DSA:3.30.460.10 5 105 6.7E-24 T 23-04-2016 CLI_RS01815 f2c6693723c2018ef831650c1ad09f59 135 SUPERFAMILY SSF81301 8 106 4.78E-16 T 23-04-2016 CLI_RS01815 f2c6693723c2018ef831650c1ad09f59 135 PANTHER PTHR33397:SF6 3 128 6.5E-14 T 23-04-2016 CLI_RS01815 f2c6693723c2018ef831650c1ad09f59 135 PANTHER PTHR33397 3 128 6.5E-14 T 23-04-2016 CLI_RS01815 f2c6693723c2018ef831650c1ad09f59 135 Pfam PF01909 Nucleotidyltransferase domain 9 74 5.4E-12 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 Pfam PF01807 CHC2 zinc finger 3 98 3.0E-36 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 TIGRFAM TIGR01391 dnaG: DNA primase 2 404 1.4E-139 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 SUPERFAMILY SSF56731 109 411 1.12E-96 T 23-04-2016 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 Gene3D G3DSA:3.40.1360.10 232 353 1.5E-40 T 23-04-2016 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 PIRSF PIRSF002811 1 586 2.6E-163 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 Gene3D G3DSA:3.90.580.10 2 98 6.4E-36 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 SMART SM00400 33 87 2.7E-33 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 Gene3D G3DSA:3.90.980.10 109 231 2.9E-43 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 SUPERFAMILY SSF57783 2 96 8.67E-32 T 23-04-2016 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 Hamap MF_00974 DNA primase [dnaG]. 1 581 27.656 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 SUPERFAMILY SSF48024 443 499 3.14E-5 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 Pfam PF10410 DnaB-helicase binding domain of primase 356 408 2.3E-7 T 23-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 SMART SM00493 249 320 3.5E-22 T 23-04-2016 IPR006171 Toprim domain CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 241 2.6E-40 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 PANTHER PTHR30313 1 580 9.8E-151 T 23-04-2016 CLI_RS14620 6d1a3b3c21592798e60820337847f80b 590 Pfam PF13155 Toprim-like 252 336 1.0E-21 T 23-04-2016 CLI_RS03500 f4dcb34a7bef1bc0de531057812e3f59 272 Gene3D G3DSA:3.20.20.140 165 267 3.3E-38 T 23-04-2016 CLI_RS03500 f4dcb34a7bef1bc0de531057812e3f59 272 Gene3D G3DSA:3.20.20.140 1 86 3.3E-38 T 23-04-2016 CLI_RS03500 f4dcb34a7bef1bc0de531057812e3f59 272 Pfam PF02811 PHP domain 5 145 3.3E-10 T 23-04-2016 IPR004013 PHP domain GO:0003824 CLI_RS03500 f4dcb34a7bef1bc0de531057812e3f59 272 SUPERFAMILY SSF89550 168 260 2.62E-43 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CLI_RS03500 f4dcb34a7bef1bc0de531057812e3f59 272 SUPERFAMILY SSF89550 1 84 2.62E-43 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CLI_RS03500 f4dcb34a7bef1bc0de531057812e3f59 272 SMART SM00481 4 69 1.3E-14 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLI_RS03500 f4dcb34a7bef1bc0de531057812e3f59 272 PANTHER PTHR30007 1 250 9.9E-31 T 23-04-2016 CLI_RS03500 f4dcb34a7bef1bc0de531057812e3f59 272 PANTHER PTHR30007:SF4 1 250 9.9E-31 T 23-04-2016 CLI_RS03500 f4dcb34a7bef1bc0de531057812e3f59 272 Gene3D G3DSA:1.10.268.10 87 164 9.7E-4 T 23-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS02180 a3a0ad2579b1f242d4a74f0175b41f9a 112 PIRSF PIRSF002070 1 109 9.3E-32 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CLI_RS02180 a3a0ad2579b1f242d4a74f0175b41f9a 112 PANTHER PTHR10302 1 112 8.9E-34 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CLI_RS02180 a3a0ad2579b1f242d4a74f0175b41f9a 112 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 104 2.7E-27 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CLI_RS02180 a3a0ad2579b1f242d4a74f0175b41f9a 112 Hamap MF_00984 Single-stranded DNA-binding protein. 1 105 26.802 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CLI_RS02180 a3a0ad2579b1f242d4a74f0175b41f9a 112 Pfam PF00436 Single-strand binding protein family 1 101 2.3E-29 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 CLI_RS02180 a3a0ad2579b1f242d4a74f0175b41f9a 112 Gene3D G3DSA:2.40.50.140 1 105 1.5E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS02180 a3a0ad2579b1f242d4a74f0175b41f9a 112 SUPERFAMILY SSF50249 1 105 5.36E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12625 7e1f7236e35ef8222a92045b7c0c2750 199 Gene3D G3DSA:1.20.58.220 1 96 2.1E-31 T 23-04-2016 CLI_RS12625 7e1f7236e35ef8222a92045b7c0c2750 199 Gene3D G3DSA:1.20.58.220 101 199 1.3E-34 T 23-04-2016 CLI_RS12625 7e1f7236e35ef8222a92045b7c0c2750 199 PANTHER PTHR10010:SF14 1 199 8.2E-73 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CLI_RS12625 7e1f7236e35ef8222a92045b7c0c2750 199 Pfam PF01895 PhoU domain 1 85 2.6E-26 T 23-04-2016 IPR026022 PhoU domain CLI_RS12625 7e1f7236e35ef8222a92045b7c0c2750 199 Pfam PF01895 PhoU domain 102 186 3.2E-21 T 23-04-2016 IPR026022 PhoU domain CLI_RS12625 7e1f7236e35ef8222a92045b7c0c2750 199 SUPERFAMILY SSF109755 1 198 2.3E-70 T 23-04-2016 CLI_RS12625 7e1f7236e35ef8222a92045b7c0c2750 199 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 1 195 8.6E-68 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CLI_RS12625 7e1f7236e35ef8222a92045b7c0c2750 199 PANTHER PTHR10010 1 199 8.2E-73 T 23-04-2016 CLI_RS12625 7e1f7236e35ef8222a92045b7c0c2750 199 PIRSF PIRSF003107 1 199 1.2E-65 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CLI_RS08360 eab77b093f259cc9d4e37529758c1bd7 327 SUPERFAMILY SSF52518 7 324 3.05E-110 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS08360 eab77b093f259cc9d4e37529758c1bd7 327 PANTHER PTHR11516:SF25 4 324 9.6E-168 T 23-04-2016 CLI_RS08360 eab77b093f259cc9d4e37529758c1bd7 327 Gene3D G3DSA:3.40.50.970 2 326 2.2E-139 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS08360 eab77b093f259cc9d4e37529758c1bd7 327 PANTHER PTHR11516 4 324 9.6E-168 T 23-04-2016 CLI_RS08360 eab77b093f259cc9d4e37529758c1bd7 327 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 320 5.2E-121 T 23-04-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CLI_RS08360 eab77b093f259cc9d4e37529758c1bd7 327 Pfam PF00676 Dehydrogenase E1 component 16 311 4.1E-100 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 CLI_RS10460 32997c3859339bcbf3cb412bbdb6bd19 419 Pfam PF10117 McrBC 5-methylcytosine restriction system component 52 353 2.7E-28 T 23-04-2016 IPR019292 5-methylcytosine restriction system component CLI_RS10460 32997c3859339bcbf3cb412bbdb6bd19 419 PANTHER PTHR38733 82 407 2.1E-12 T 23-04-2016 CLI_RS10460 32997c3859339bcbf3cb412bbdb6bd19 419 PANTHER PTHR38733:SF1 82 407 2.1E-12 T 23-04-2016 CLI_RS04695 5a79f20b2a5eca158a179c5768380874 390 SMART SM00422 3 71 9.8E-24 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04695 5a79f20b2a5eca158a179c5768380874 390 Gene3D G3DSA:1.10.1660.10 3 108 1.2E-25 T 23-04-2016 CLI_RS04695 5a79f20b2a5eca158a179c5768380874 390 PANTHER PTHR30204:SF27 3 203 6.8E-33 T 23-04-2016 CLI_RS04695 5a79f20b2a5eca158a179c5768380874 390 Pfam PF13411 MerR HTH family regulatory protein 3 70 3.2E-15 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04695 5a79f20b2a5eca158a179c5768380874 390 Pfam PF07739 TipAS antibiotic-recognition domain 289 385 4.1E-10 T 23-04-2016 IPR012925 TipAS antibiotic-recognition domain CLI_RS04695 5a79f20b2a5eca158a179c5768380874 390 Pfam PF07739 TipAS antibiotic-recognition domain 160 289 2.4E-17 T 23-04-2016 IPR012925 TipAS antibiotic-recognition domain CLI_RS04695 5a79f20b2a5eca158a179c5768380874 390 PANTHER PTHR30204 3 203 6.8E-33 T 23-04-2016 CLI_RS04695 5a79f20b2a5eca158a179c5768380874 390 SUPERFAMILY SSF46955 3 104 1.17E-25 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS08160 216aa3cfa7789da776c7c3531864a951 472 PANTHER PTHR11785:SF77 4 465 3.4E-203 T 23-04-2016 CLI_RS08160 216aa3cfa7789da776c7c3531864a951 472 Pfam PF13520 Amino acid permease 13 432 1.1E-63 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS08160 216aa3cfa7789da776c7c3531864a951 472 PIRSF PIRSF006060 1 472 4.7E-54 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS08160 216aa3cfa7789da776c7c3531864a951 472 PANTHER PTHR11785 4 465 3.4E-203 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS08160 216aa3cfa7789da776c7c3531864a951 472 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 472 1.7E-134 T 23-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CLI_RS14840 bc11aafbb76fd91268e79e2be334ab4b 189 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 11 182 5.2E-48 T 23-04-2016 IPR005249 Conserved hypothetical protein CHP00488 CLI_RS14840 bc11aafbb76fd91268e79e2be334ab4b 189 TIGRFAM TIGR00277 HDIG: HDIG domain 17 96 3.4E-7 T 23-04-2016 IPR006675 HDIG domain CLI_RS14840 bc11aafbb76fd91268e79e2be334ab4b 189 Pfam PF01966 HD domain 19 132 1.1E-9 T 23-04-2016 IPR006674 HD domain CLI_RS14840 bc11aafbb76fd91268e79e2be334ab4b 189 Gene3D G3DSA:1.10.3210.10 1 186 1.5E-59 T 23-04-2016 IPR006674 HD domain CLI_RS14840 bc11aafbb76fd91268e79e2be334ab4b 189 SUPERFAMILY SSF109604 4 181 2.14E-30 T 23-04-2016 CLI_RS14840 bc11aafbb76fd91268e79e2be334ab4b 189 PANTHER PTHR35795 1 186 1.6E-69 T 23-04-2016 CLI_RS14840 bc11aafbb76fd91268e79e2be334ab4b 189 SMART SM00471 15 143 4.6E-7 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 Gene3D G3DSA:3.30.390.30 334 447 4.3E-38 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 SUPERFAMILY SSF55424 322 447 3.78E-30 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 PANTHER PTHR22912 1 442 1.6E-178 T 23-04-2016 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 330 431 1.9E-15 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 PANTHER PTHR22912:SF140 1 442 1.6E-178 T 23-04-2016 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 SUPERFAMILY SSF52821 432 543 3.93E-29 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 3.9E-22 T 23-04-2016 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.9E-22 T 23-04-2016 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 3.9E-22 T 23-04-2016 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 3.9E-22 T 23-04-2016 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 3.9E-22 T 23-04-2016 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 SUPERFAMILY SSF51905 2 316 4.96E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 Pfam PF00581 Rhodanese-like domain 464 541 1.8E-14 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 Gene3D G3DSA:3.50.50.60 117 315 6.7E-58 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 Gene3D G3DSA:3.40.250.10 448 542 2.2E-26 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 5.7E-15 T 23-04-2016 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 5.7E-15 T 23-04-2016 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 5.7E-15 T 23-04-2016 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 179 5.7E-15 T 23-04-2016 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 305 1.9E-62 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 Gene3D G3DSA:3.50.50.60 2 116 7.6E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08120 1f95b23c9b84e718924f86f90cc8a59a 566 SMART SM00450 454 549 2.6E-23 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS14660 eea0b6c83adecbecc1c1c014b17ee658 132 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLI_RS14660 eea0b6c83adecbecc1c1c014b17ee658 132 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 98 8.4E-18 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CLI_RS14660 eea0b6c83adecbecc1c1c014b17ee658 132 SUPERFAMILY SSF53927 1 130 7.68E-48 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CLI_RS14660 eea0b6c83adecbecc1c1c014b17ee658 132 Gene3D G3DSA:3.40.140.10 2 130 5.5E-56 T 23-04-2016 CLI_RS14660 eea0b6c83adecbecc1c1c014b17ee658 132 PANTHER PTHR11644 3 132 3.6E-67 T 23-04-2016 CLI_RS14660 eea0b6c83adecbecc1c1c014b17ee658 132 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 4 130 3.4E-48 T 23-04-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CLI_RS14415 abc28e9dc91a3d80aa2dec794c17d38f 181 SUPERFAMILY SSF52540 3 169 2.05E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14415 abc28e9dc91a3d80aa2dec794c17d38f 181 PANTHER PTHR20953 2 165 5.1E-30 T 23-04-2016 CLI_RS14415 abc28e9dc91a3d80aa2dec794c17d38f 181 Pfam PF03266 NTPase 3 162 9.9E-42 T 23-04-2016 IPR004948 Nucleoside-triphosphatase, THEP1 type GO:0098519 KEGG: 00230+3.6.1.15|KEGG: 00730+3.6.1.15|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CLI_RS14415 abc28e9dc91a3d80aa2dec794c17d38f 181 Gene3D G3DSA:3.40.50.300 74 126 1.6E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14415 abc28e9dc91a3d80aa2dec794c17d38f 181 Gene3D G3DSA:3.40.50.300 3 42 1.6E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09160 af61b04213f36a4254a1c5a65e691829 217 PIRSF PIRSF038973 1 210 7.4E-70 T 23-04-2016 IPR014196 Stage II sporulation protein M CLI_RS09160 af61b04213f36a4254a1c5a65e691829 217 Pfam PF01944 Stage II sporulation protein M 24 200 5.8E-26 T 23-04-2016 IPR002798 Stage II sporulation protein M-like CLI_RS09160 af61b04213f36a4254a1c5a65e691829 217 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 8 205 2.2E-69 T 23-04-2016 IPR014196 Stage II sporulation protein M CLI_RS15360 d06f805551fbd7d4627575415bf7c393 827 SUPERFAMILY SSF56601 232 252 2.09E-99 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS15360 d06f805551fbd7d4627575415bf7c393 827 SUPERFAMILY SSF56601 290 717 2.09E-99 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS15360 d06f805551fbd7d4627575415bf7c393 827 PANTHER PTHR32282 3 764 3.2E-250 T 23-04-2016 CLI_RS15360 d06f805551fbd7d4627575415bf7c393 827 Pfam PF00912 Transglycosylase 67 248 3.2E-57 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 CLI_RS15360 d06f805551fbd7d4627575415bf7c393 827 Pfam PF00905 Penicillin binding protein transpeptidase domain 358 620 1.1E-25 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLI_RS15360 d06f805551fbd7d4627575415bf7c393 827 Gene3D G3DSA:1.10.3810.10 71 264 1.0E-65 T 23-04-2016 CLI_RS15360 d06f805551fbd7d4627575415bf7c393 827 SUPERFAMILY SSF53955 53 264 1.8E-65 T 23-04-2016 IPR023346 Lysozyme-like domain CLI_RS15360 d06f805551fbd7d4627575415bf7c393 827 PANTHER PTHR32282:SF0 3 764 3.2E-250 T 23-04-2016 CLI_RS15360 d06f805551fbd7d4627575415bf7c393 827 Gene3D G3DSA:3.40.710.10 292 707 8.7E-104 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS15360 d06f805551fbd7d4627575415bf7c393 827 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 75 645 1.9E-167 T 23-04-2016 CLI_RS12455 f7a0ea10ca2e05716075742b099956b0 409 SUPERFAMILY SSF52374 3 107 1.47E-17 T 23-04-2016 CLI_RS12455 f7a0ea10ca2e05716075742b099956b0 409 SUPERFAMILY SSF52374 163 225 1.47E-17 T 23-04-2016 CLI_RS12455 f7a0ea10ca2e05716075742b099956b0 409 Pfam PF05636 HIGH Nucleotidyl Transferase 1 390 7.6E-132 T 23-04-2016 IPR008513 Uncharacterised protein family UPF0348 CLI_RS12455 f7a0ea10ca2e05716075742b099956b0 409 PANTHER PTHR37825:SF1 2 409 3.5E-120 T 23-04-2016 CLI_RS12455 f7a0ea10ca2e05716075742b099956b0 409 PANTHER PTHR37825 2 409 3.5E-120 T 23-04-2016 CLI_RS12455 f7a0ea10ca2e05716075742b099956b0 409 Hamap MF_01539 UPF0348 protein . 2 403 35.458 T 23-04-2016 IPR008513 Uncharacterised protein family UPF0348 CLI_RS12455 f7a0ea10ca2e05716075742b099956b0 409 Gene3D G3DSA:3.40.50.620 1 246 2.2E-75 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS09090 4a5993c05da9f3cfb976d33231b30de1 378 PANTHER PTHR21581:SF1 7 322 7.5E-106 T 23-04-2016 CLI_RS09090 4a5993c05da9f3cfb976d33231b30de1 378 Gene3D G3DSA:2.60.410.10 277 358 8.0E-4 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS09090 4a5993c05da9f3cfb976d33231b30de1 378 Gene3D G3DSA:3.40.710.10 10 274 1.3E-83 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS09090 4a5993c05da9f3cfb976d33231b30de1 378 SUPERFAMILY SSF56601 8 276 1.93E-65 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS09090 4a5993c05da9f3cfb976d33231b30de1 378 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 258 1.1E-62 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CLI_RS09090 4a5993c05da9f3cfb976d33231b30de1 378 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 279 359 1.9E-6 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS09090 4a5993c05da9f3cfb976d33231b30de1 378 PANTHER PTHR21581 7 322 7.5E-106 T 23-04-2016 CLI_RS09090 4a5993c05da9f3cfb976d33231b30de1 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 68 79 3.29E-15 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLI_RS09090 4a5993c05da9f3cfb976d33231b30de1 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 3.29E-15 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLI_RS09090 4a5993c05da9f3cfb976d33231b30de1 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 3.29E-15 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLI_RS09090 4a5993c05da9f3cfb976d33231b30de1 378 SMART SM00936 276 361 3.7E-8 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS14630 970bfb5d857422681d7208a2ffd9c63a 356 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 36 339 3.0E-77 T 23-04-2016 IPR014255 Spore coat protein CotS CLI_RS14630 970bfb5d857422681d7208a2ffd9c63a 356 Pfam PF01636 Phosphotransferase enzyme family 68 275 1.5E-9 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase CLI_RS14630 970bfb5d857422681d7208a2ffd9c63a 356 SUPERFAMILY SSF56112 13 339 1.38E-50 T 23-04-2016 IPR011009 Protein kinase-like domain CLI_RS14630 970bfb5d857422681d7208a2ffd9c63a 356 Gene3D G3DSA:3.30.200.20 11 112 1.1E-36 T 23-04-2016 CLI_RS14630 970bfb5d857422681d7208a2ffd9c63a 356 PANTHER PTHR39179 4 356 4.0E-158 T 23-04-2016 CLI_RS14630 970bfb5d857422681d7208a2ffd9c63a 356 Gene3D G3DSA:3.90.1200.10 113 338 1.1E-53 T 23-04-2016 CLI_RS14630 970bfb5d857422681d7208a2ffd9c63a 356 PANTHER PTHR39179:SF1 4 356 4.0E-158 T 23-04-2016 CLI_RS11195 ef13e525946a39facd208d78d402a702 392 PANTHER PTHR30294:SF10 1 391 2.0E-105 T 23-04-2016 CLI_RS11195 ef13e525946a39facd208d78d402a702 392 Pfam PF12698 ABC-2 family transporter protein 20 376 3.2E-34 T 23-04-2016 CLI_RS11195 ef13e525946a39facd208d78d402a702 392 PANTHER PTHR30294 1 391 2.0E-105 T 23-04-2016 CLI_RS17000 bdc34c3d0dd08b479645552d867fae5b 152 Gene3D G3DSA:3.40.630.30 6 149 7.4E-36 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS17000 bdc34c3d0dd08b479645552d867fae5b 152 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 15 147 3.5E-43 T 23-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 CLI_RS17000 bdc34c3d0dd08b479645552d867fae5b 152 Pfam PF00583 Acetyltransferase (GNAT) family 54 128 1.9E-17 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS17000 bdc34c3d0dd08b479645552d867fae5b 152 PANTHER PTHR23091:SF1 1 150 6.8E-77 T 23-04-2016 CLI_RS17000 bdc34c3d0dd08b479645552d867fae5b 152 PANTHER PTHR23091 1 150 6.8E-77 T 23-04-2016 CLI_RS17000 bdc34c3d0dd08b479645552d867fae5b 152 SUPERFAMILY SSF55729 5 149 6.1E-34 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS00880 96064d23376f5390d42024ad073684e3 385 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 370 5.3E-159 T 23-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 CLI_RS00880 96064d23376f5390d42024ad073684e3 385 SUPERFAMILY SSF53756 3 375 2.93E-134 T 23-04-2016 CLI_RS00880 96064d23376f5390d42024ad073684e3 385 Gene3D G3DSA:3.40.50.2000 206 370 4.0E-63 T 23-04-2016 CLI_RS00880 96064d23376f5390d42024ad073684e3 385 PANTHER PTHR18964 2 382 5.8E-215 T 23-04-2016 CLI_RS00880 96064d23376f5390d42024ad073684e3 385 PANTHER PTHR18964:SF2 2 382 5.8E-215 T 23-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 CLI_RS00880 96064d23376f5390d42024ad073684e3 385 Gene3D G3DSA:3.40.50.2000 3 205 2.9E-86 T 23-04-2016 CLI_RS00880 96064d23376f5390d42024ad073684e3 385 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 367 1.4E-121 T 23-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 PRINTS PR01469 Bacterial carbamate kinase signature 268 283 2.6E-62 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 PRINTS PR01469 Bacterial carbamate kinase signature 183 201 2.6E-62 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 PRINTS PR01469 Bacterial carbamate kinase signature 160 179 2.6E-62 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 PRINTS PR01469 Bacterial carbamate kinase signature 76 94 2.6E-62 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 PRINTS PR01469 Bacterial carbamate kinase signature 213 228 2.6E-62 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 2.6E-62 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 PRINTS PR01469 Bacterial carbamate kinase signature 42 61 2.6E-62 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 Pfam PF00696 Amino acid kinase family 1 290 1.5E-28 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 TIGRFAM TIGR00746 arcC: carbamate kinase 1 313 7.5E-120 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 PANTHER PTHR30409 1 314 1.3E-154 T 23-04-2016 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 Gene3D G3DSA:3.40.1160.10 1 313 2.9E-106 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 PIRSF PIRSF000723 1 314 1.5E-122 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 SUPERFAMILY SSF53633 1 312 3.01E-80 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS12980 3d0d1e02b3d5c445b7741eec6ef6d1e1 314 PANTHER PTHR30409:SF1 1 314 1.3E-154 T 23-04-2016 CLI_RS02910 4a75e5a44308c48aa2417ab2625e400e 146 Gene3D G3DSA:2.40.50.140 89 143 8.7E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS02910 4a75e5a44308c48aa2417ab2625e400e 146 Pfam PF01957 NfeD-like C-terminal, partner-binding 9 143 5.2E-19 T 23-04-2016 IPR002810 NfeD-like, C-terminal domain CLI_RS02910 4a75e5a44308c48aa2417ab2625e400e 146 SUPERFAMILY SSF141322 86 144 2.88E-7 T 23-04-2016 CLI_RS02910 4a75e5a44308c48aa2417ab2625e400e 146 PANTHER PTHR33507:SF3 1 145 1.2E-43 T 23-04-2016 CLI_RS02910 4a75e5a44308c48aa2417ab2625e400e 146 PANTHER PTHR33507 1 145 1.2E-43 T 23-04-2016 CLI_RS18015 42fe9e4d9ec62f9345eb1670b0bcf7ca 151 PANTHER PTHR40028 1 151 8.1E-73 T 23-04-2016 CLI_RS18015 42fe9e4d9ec62f9345eb1670b0bcf7ca 151 PIRSF PIRSF010607 1 151 1.3E-56 T 23-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 CLI_RS18015 42fe9e4d9ec62f9345eb1670b0bcf7ca 151 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 149 4.7E-54 T 23-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 CLI_RS18015 42fe9e4d9ec62f9345eb1670b0bcf7ca 151 PANTHER PTHR40028:SF1 1 151 8.1E-73 T 23-04-2016 CLI_RS07585 62768fa5f89cf381da07894e10731875 230 PANTHER PTHR21234:SF16 1 230 3.8E-54 T 23-04-2016 CLI_RS07585 62768fa5f89cf381da07894e10731875 230 Pfam PF01048 Phosphorylase superfamily 2 227 2.6E-53 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLI_RS07585 62768fa5f89cf381da07894e10731875 230 SUPERFAMILY SSF53167 1 227 4.06E-66 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLI_RS07585 62768fa5f89cf381da07894e10731875 230 Gene3D G3DSA:3.40.50.1580 1 230 1.1E-71 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLI_RS07585 62768fa5f89cf381da07894e10731875 230 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 227 7.9E-53 T 23-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 CLI_RS07585 62768fa5f89cf381da07894e10731875 230 PANTHER PTHR21234 1 230 3.8E-54 T 23-04-2016 IPR018017 Nucleoside phosphorylase CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 PANTHER PTHR10169:SF48 742 828 1.7E-255 T 23-04-2016 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 PANTHER PTHR10169:SF48 9 717 1.7E-255 T 23-04-2016 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 Gene3D G3DSA:3.90.199.10 36 240 1.1E-113 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 Gene3D G3DSA:3.90.199.10 345 410 1.1E-113 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 811 849 6.8 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 564 595 1.2 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 858 903 1.8E-8 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 517 558 0.91 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 622 664 4.1E-4 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 Gene3D G3DSA:3.30.1360.40 241 344 5.5E-28 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 PANTHER PTHR10169 742 828 1.7E-255 T 23-04-2016 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 PANTHER PTHR10169 9 717 1.7E-255 T 23-04-2016 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 SUPERFAMILY SSF56719 36 499 1.14E-164 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 SUPERFAMILY SSF101904 512 740 9.55E-47 T 23-04-2016 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 SUPERFAMILY SSF101904 724 945 2.35E-27 T 23-04-2016 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 SMART SM00434 16 476 4.1E-223 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 37 483 4.3E-144 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 Gene3D G3DSA:2.120.10.90 753 943 8.3E-25 T 23-04-2016 CLI_RS13775 d2025242d43f93be1499f6375fcbe7da 956 Gene3D G3DSA:2.120.10.90 510 740 2.5E-49 T 23-04-2016 CLI_RS04640 a340eae3c4ad239a74d6fb7b0ac24a05 473 SUPERFAMILY SSF51445 3 471 1.59E-160 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS04640 a340eae3c4ad239a74d6fb7b0ac24a05 473 Gene3D G3DSA:3.20.20.80 4 472 7.3E-151 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS04640 a340eae3c4ad239a74d6fb7b0ac24a05 473 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 23-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CLI_RS04640 a340eae3c4ad239a74d6fb7b0ac24a05 473 PANTHER PTHR10353:SF74 6 471 0.0 T 23-04-2016 CLI_RS04640 a340eae3c4ad239a74d6fb7b0ac24a05 473 PANTHER PTHR10353 6 471 0.0 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS04640 a340eae3c4ad239a74d6fb7b0ac24a05 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 369 377 8.9E-17 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS04640 a340eae3c4ad239a74d6fb7b0ac24a05 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 303 317 8.9E-17 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS04640 a340eae3c4ad239a74d6fb7b0ac24a05 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 412 429 8.9E-17 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS04640 a340eae3c4ad239a74d6fb7b0ac24a05 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 437 449 8.9E-17 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS04640 a340eae3c4ad239a74d6fb7b0ac24a05 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 390 401 8.9E-17 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS04640 a340eae3c4ad239a74d6fb7b0ac24a05 473 Pfam PF00232 Glycosyl hydrolase family 1 5 472 8.1E-137 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CLI_RS04640 a340eae3c4ad239a74d6fb7b0ac24a05 473 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 369 377 - T 23-04-2016 IPR018120 Glycoside hydrolase family 1, active site CLI_RS13185 f99a957382b876d603918dc386c362b7 239 SMART SM00770 1 238 1.7E-61 T 23-04-2016 IPR001531 Phospholipase C domain GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 CLI_RS13185 f99a957382b876d603918dc386c362b7 239 Gene3D G3DSA:1.10.575.10 26 236 2.9E-52 T 23-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 CLI_RS13185 f99a957382b876d603918dc386c362b7 239 Pfam PF00882 Zinc dependent phospholipase C 40 184 1.7E-15 T 23-04-2016 IPR029002 Phospholipase C/D CLI_RS13185 f99a957382b876d603918dc386c362b7 239 ProDom PD003946 PHOSPHOLIPASE C PLCB HYDROLASE PRECURSOR PHOSPHATIDYLCHOLINE SIGNAL CHOLINEPHOSPHOHYDROLASE TOXIN PLC 79 226 1.0E-4 T 23-04-2016 IPR001531 Phospholipase C domain GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 CLI_RS13185 f99a957382b876d603918dc386c362b7 239 SUPERFAMILY SSF48537 26 232 1.05E-43 T 23-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 CLI_RS01895 a4743954fb27cc53f0f0d434b06e18bd 209 SMART SM00793 6 204 2.1E-21 T 23-04-2016 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLI_RS01895 a4743954fb27cc53f0f0d434b06e18bd 209 Pfam PF04647 Accessory gene regulator B 8 195 5.5E-43 T 23-04-2016 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLI_RS13465 8d52bbc55b430b3b86b1cd6b71826120 320 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 77 234 7.0E-44 T 23-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain CLI_RS13465 8d52bbc55b430b3b86b1cd6b71826120 320 PANTHER PTHR33392:SF6 4 318 3.2E-87 T 23-04-2016 CLI_RS13465 8d52bbc55b430b3b86b1cd6b71826120 320 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 77 234 4.1E-33 T 23-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain CLI_RS13465 8d52bbc55b430b3b86b1cd6b71826120 320 PANTHER PTHR33392 4 318 3.2E-87 T 23-04-2016 CLI_RS07790 dfc8874460a7b2b26b6c4c7f8e19a0c7 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 292 1.8E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07790 dfc8874460a7b2b26b6c4c7f8e19a0c7 297 PANTHER PTHR30193:SF6 4 297 4.5E-125 T 23-04-2016 CLI_RS07790 dfc8874460a7b2b26b6c4c7f8e19a0c7 297 PANTHER PTHR30193 4 297 4.5E-125 T 23-04-2016 CLI_RS07790 dfc8874460a7b2b26b6c4c7f8e19a0c7 297 SUPERFAMILY SSF161098 56 284 1.2E-61 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07790 dfc8874460a7b2b26b6c4c7f8e19a0c7 297 Gene3D G3DSA:1.10.3720.10 62 293 2.1E-62 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS16850 4e534dcce3af4e93e442e859f1016afd 543 Gene3D G3DSA:3.40.50.980 195 357 1.3E-39 T 23-04-2016 CLI_RS16850 4e534dcce3af4e93e442e859f1016afd 543 SUPERFAMILY SSF56801 4 534 6.54E-135 T 23-04-2016 CLI_RS16850 4e534dcce3af4e93e442e859f1016afd 543 Gene3D G3DSA:3.40.50.980 7 194 2.2E-30 T 23-04-2016 CLI_RS16850 4e534dcce3af4e93e442e859f1016afd 543 Pfam PF00501 AMP-binding enzyme 13 439 1.5E-93 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CLI_RS16850 4e534dcce3af4e93e442e859f1016afd 543 Gene3D G3DSA:2.30.38.10 358 430 3.2E-27 T 23-04-2016 CLI_RS16850 4e534dcce3af4e93e442e859f1016afd 543 PANTHER PTHR24096 5 531 3.7E-151 T 23-04-2016 CLI_RS16850 4e534dcce3af4e93e442e859f1016afd 543 Gene3D G3DSA:3.30.300.30 435 532 5.3E-33 T 23-04-2016 CLI_RS16850 4e534dcce3af4e93e442e859f1016afd 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 523 1.1E-17 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CLI_RS16850 4e534dcce3af4e93e442e859f1016afd 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 23-04-2016 IPR020845 AMP-binding, conserved site CLI_RS08715 1c37f62a42a45452a4bf4bd34b55b041 153 Pfam PF13690 Chemotaxis phosphatase CheX 45 129 3.7E-12 T 23-04-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- CLI_RS08715 1c37f62a42a45452a4bf4bd34b55b041 153 SUPERFAMILY SSF103039 1 148 5.62E-27 T 23-04-2016 IPR028976 CheC-like domain CLI_RS08715 1c37f62a42a45452a4bf4bd34b55b041 153 PANTHER PTHR39452 1 153 5.1E-68 T 23-04-2016 CLI_RS08715 1c37f62a42a45452a4bf4bd34b55b041 153 Gene3D G3DSA:3.40.1550.10 1 152 1.2E-32 T 23-04-2016 IPR028976 CheC-like domain CLI_RS08715 1c37f62a42a45452a4bf4bd34b55b041 153 PANTHER PTHR39452:SF1 1 153 5.1E-68 T 23-04-2016 CLI_RS17745 37e36656dc00cc2c81bdc75ea878bc25 146 Gene3D G3DSA:3.100.10.10 32 146 6.9E-43 T 23-04-2016 CLI_RS17745 37e36656dc00cc2c81bdc75ea878bc25 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 2.7E-40 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P CLI_RS17745 37e36656dc00cc2c81bdc75ea878bc25 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.662 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CLI_RS17745 37e36656dc00cc2c81bdc75ea878bc25 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 1.0E-55 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 CLI_RS17745 37e36656dc00cc2c81bdc75ea878bc25 146 PANTHER PTHR12934 1 146 1.5E-77 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 CLI_RS17745 37e36656dc00cc2c81bdc75ea878bc25 146 SUPERFAMILY SSF52080 4 144 7.33E-51 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P CLI_RS17745 37e36656dc00cc2c81bdc75ea878bc25 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 23-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS16695 09c172e39c5566211a7cef40bd8b301b 199 Pfam PF01725 Ham1 family 5 192 5.8E-55 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CLI_RS16695 09c172e39c5566211a7cef40bd8b301b 199 Gene3D G3DSA:3.90.950.10 1 197 1.1E-72 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CLI_RS16695 09c172e39c5566211a7cef40bd8b301b 199 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 3 197 46.183 T 23-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CLI_RS16695 09c172e39c5566211a7cef40bd8b301b 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 194 2.5E-58 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CLI_RS16695 09c172e39c5566211a7cef40bd8b301b 199 PANTHER PTHR11067:SF9 1 192 7.0E-72 T 23-04-2016 CLI_RS16695 09c172e39c5566211a7cef40bd8b301b 199 PANTHER PTHR11067 1 192 7.0E-72 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CLI_RS16695 09c172e39c5566211a7cef40bd8b301b 199 SUPERFAMILY SSF52972 2 195 7.06E-66 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CLI_RS06605 a7343babd9fcde44499d8641b673b44e 291 Pfam PF01545 Cation efflux family 17 207 2.0E-51 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLI_RS06605 a7343babd9fcde44499d8641b673b44e 291 Gene3D G3DSA:3.30.70.1350 208 290 1.7E-19 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CLI_RS06605 a7343babd9fcde44499d8641b673b44e 291 SUPERFAMILY SSF161111 8 208 8.63E-57 T 23-04-2016 CLI_RS06605 a7343babd9fcde44499d8641b673b44e 291 SUPERFAMILY SSF160240 211 290 2.22E-17 T 23-04-2016 CLI_RS06605 a7343babd9fcde44499d8641b673b44e 291 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 290 2.4E-77 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLI_RS06605 a7343babd9fcde44499d8641b673b44e 291 Gene3D G3DSA:1.20.1510.10 13 206 4.6E-50 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CLI_RS06605 a7343babd9fcde44499d8641b673b44e 291 PANTHER PTHR11562 3 291 3.5E-102 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLI_RS06605 a7343babd9fcde44499d8641b673b44e 291 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 289 2.0E-21 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CLI_RS06605 a7343babd9fcde44499d8641b673b44e 291 PANTHER PTHR11562:SF55 3 291 3.5E-102 T 23-04-2016 CLI_RS01615 52bf9c429e7958f2b8800bcf13ae511a 169 PANTHER PTHR30175 5 120 1.5E-44 T 23-04-2016 CLI_RS01615 52bf9c429e7958f2b8800bcf13ae511a 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 25 145 6.4E-51 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS01615 52bf9c429e7958f2b8800bcf13ae511a 169 SUPERFAMILY SSF51261 22 166 7.67E-54 T 23-04-2016 IPR011055 Duplicated hybrid motif CLI_RS01615 52bf9c429e7958f2b8800bcf13ae511a 169 Gene3D G3DSA:2.70.70.10 17 168 3.1E-57 T 23-04-2016 CLI_RS01615 52bf9c429e7958f2b8800bcf13ae511a 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 26 144 2.1E-47 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS01615 52bf9c429e7958f2b8800bcf13ae511a 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 87 99 - T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS16175 c384d80a9783b680a102e126bb48f9e4 195 SUPERFAMILY SSF50475 9 174 6.87E-43 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS16175 c384d80a9783b680a102e126bb48f9e4 195 Gene3D G3DSA:2.30.110.10 6 171 5.5E-51 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS16175 c384d80a9783b680a102e126bb48f9e4 195 Pfam PF01613 Flavin reductase like domain 14 148 8.9E-24 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 CLI_RS16175 c384d80a9783b680a102e126bb48f9e4 195 PANTHER PTHR30466 12 192 5.9E-64 T 23-04-2016 CLI_RS16175 c384d80a9783b680a102e126bb48f9e4 195 PANTHER PTHR30466:SF6 12 192 5.9E-64 T 23-04-2016 CLI_RS16175 c384d80a9783b680a102e126bb48f9e4 195 SMART SM00903 11 156 1.5E-19 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 CLI_RS09305 6c7c1a0c3470c5c35cbefd74555f81fd 416 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 39 376 4.4E-90 T 23-04-2016 IPR006427 Phage portal protein, HK97 CLI_RS09305 6c7c1a0c3470c5c35cbefd74555f81fd 416 Pfam PF04860 Phage portal protein 50 373 5.1E-96 T 23-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 34 463 3.3E-90 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 PANTHER PTHR28570:SF2 1 464 0.0 T 23-04-2016 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 337 353 7.4E-29 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 168 185 7.4E-29 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 99 115 7.4E-29 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 132 152 7.4E-29 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 431 446 7.4E-29 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 292 310 7.4E-29 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 Gene3D G3DSA:3.40.630.10 27 109 1.9E-87 T 23-04-2016 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 Gene3D G3DSA:3.40.630.10 252 464 1.9E-87 T 23-04-2016 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 PANTHER PTHR28570 1 464 0.0 T 23-04-2016 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 SUPERFAMILY SSF53187 12 110 5.66E-105 T 23-04-2016 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 SUPERFAMILY SSF53187 243 464 5.66E-105 T 23-04-2016 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 SUPERFAMILY SSF101821 111 243 3.02E-36 T 23-04-2016 CLI_RS13035 31f29157c2ea2390577359059ff968fa 467 Gene3D G3DSA:2.30.250.10 110 246 2.7E-51 T 23-04-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 CLI_RS02440 04ce36d637a7b1da0708b8c888f72efa 563 PANTHER PTHR32089:SF1 57 420 3.7E-76 T 23-04-2016 CLI_RS02440 04ce36d637a7b1da0708b8c888f72efa 563 Gene3D G3DSA:3.30.450.20 464 559 2.0E-19 T 23-04-2016 CLI_RS02440 04ce36d637a7b1da0708b8c888f72efa 563 SMART SM00283 156 417 1.3E-57 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS02440 04ce36d637a7b1da0708b8c888f72efa 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 196 415 5.7E-45 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS02440 04ce36d637a7b1da0708b8c888f72efa 563 Gene3D G3DSA:1.10.287.950 171 387 3.2E-49 T 23-04-2016 CLI_RS02440 04ce36d637a7b1da0708b8c888f72efa 563 Pfam PF02743 Cache domain 421 559 9.5E-14 T 23-04-2016 IPR033479 Double Cache domain 1 CLI_RS02440 04ce36d637a7b1da0708b8c888f72efa 563 PANTHER PTHR32089 57 420 3.7E-76 T 23-04-2016 CLI_RS02440 04ce36d637a7b1da0708b8c888f72efa 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 1.3E-11 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS02440 04ce36d637a7b1da0708b8c888f72efa 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 213 1.3E-11 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS02440 04ce36d637a7b1da0708b8c888f72efa 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 331 360 1.3E-11 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS02440 04ce36d637a7b1da0708b8c888f72efa 563 SUPERFAMILY SSF103190 460 549 3.14E-11 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS02440 04ce36d637a7b1da0708b8c888f72efa 563 SUPERFAMILY SSF58104 162 430 1.29E-61 T 23-04-2016 CLI_RS08340 e25a0ce08049c3130b00511198c10c2e 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 179 8.5E-18 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08340 e25a0ce08049c3130b00511198c10c2e 190 SUPERFAMILY SSF88659 112 180 1.72E-9 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08340 e25a0ce08049c3130b00511198c10c2e 190 Pfam PF08281 Sigma-70, region 4 124 174 3.3E-6 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08340 e25a0ce08049c3130b00511198c10c2e 190 Gene3D G3DSA:1.10.1740.10 3 92 1.7E-10 T 23-04-2016 CLI_RS08340 e25a0ce08049c3130b00511198c10c2e 190 PANTHER PTHR30173:SF24 1 180 1.3E-34 T 23-04-2016 CLI_RS08340 e25a0ce08049c3130b00511198c10c2e 190 SUPERFAMILY SSF88946 5 94 5.49E-11 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08340 e25a0ce08049c3130b00511198c10c2e 190 PANTHER PTHR30173 1 180 1.3E-34 T 23-04-2016 CLI_RS08340 e25a0ce08049c3130b00511198c10c2e 190 Pfam PF04542 Sigma-70 region 2 44 91 2.5E-7 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08340 e25a0ce08049c3130b00511198c10c2e 190 Gene3D G3DSA:1.10.10.10 117 180 7.0E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01905 298f430a97c2952454d814fc507a2551 617 Gene3D G3DSA:3.30.450.20 218 361 4.0E-10 T 23-04-2016 CLI_RS01905 298f430a97c2952454d814fc507a2551 617 SMART SM00388 356 425 1.3E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01905 298f430a97c2952454d814fc507a2551 617 Gene3D G3DSA:3.30.565.10 411 582 7.0E-48 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01905 298f430a97c2952454d814fc507a2551 617 SMART SM00387 471 583 5.4E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01905 298f430a97c2952454d814fc507a2551 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 522 7.6E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01905 298f430a97c2952454d814fc507a2551 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 536 7.6E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01905 298f430a97c2952454d814fc507a2551 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 580 7.6E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01905 298f430a97c2952454d814fc507a2551 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 561 7.6E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01905 298f430a97c2952454d814fc507a2551 617 PANTHER PTHR24423 201 587 5.5E-93 T 23-04-2016 CLI_RS01905 298f430a97c2952454d814fc507a2551 617 PANTHER PTHR24423 7 20 5.5E-93 T 23-04-2016 CLI_RS01905 298f430a97c2952454d814fc507a2551 617 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 216 335 3.5E-9 T 23-04-2016 IPR000014 PAS domain CLI_RS01905 298f430a97c2952454d814fc507a2551 617 SUPERFAMILY SSF47384 345 425 8.44E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01905 298f430a97c2952454d814fc507a2551 617 SUPERFAMILY SSF55785 203 328 7.33E-8 T 23-04-2016 IPR000014 PAS domain CLI_RS01905 298f430a97c2952454d814fc507a2551 617 Gene3D G3DSA:1.10.287.130 362 410 3.3E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01905 298f430a97c2952454d814fc507a2551 617 SUPERFAMILY SSF55874 414 582 5.37E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01905 298f430a97c2952454d814fc507a2551 617 Pfam PF00512 His Kinase A (phospho-acceptor) domain 358 425 1.1E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01905 298f430a97c2952454d814fc507a2551 617 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 472 581 6.8E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS14865 5d808f8c6cfbdfa669e2b2520ce1645c 108 Gene3D G3DSA:3.30.70.1490 6 105 9.2E-17 T 23-04-2016 CLI_RS14865 5d808f8c6cfbdfa669e2b2520ce1645c 108 PANTHER PTHR39178 1 108 1.2E-37 T 23-04-2016 CLI_RS14865 5d808f8c6cfbdfa669e2b2520ce1645c 108 Pfam PF04327 Cysteine peptidase C108, N-terminal of ribosomal L27 1 102 1.9E-26 T 23-04-2016 IPR007422 Cysteine peptidase C108, N-terminal of ribosomal L27 CLI_RS14865 5d808f8c6cfbdfa669e2b2520ce1645c 108 SUPERFAMILY SSF118010 1 108 3.66E-31 T 23-04-2016 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 58 71 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 219 245 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 Pfam PF04545 Sigma-70, region 4 198 246 3.7E-12 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 PANTHER PTHR30603 1 247 7.5E-76 T 23-04-2016 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 28 249 5.0E-83 T 23-04-2016 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 PANTHER PTHR30603:SF19 1 247 7.5E-76 T 23-04-2016 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 SUPERFAMILY SSF88659 106 179 9.16E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 19 249 4.3E-115 T 23-04-2016 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 PRINTS PR00046 Major sigma-70 factor signature 202 214 7.8E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 PRINTS PR00046 Major sigma-70 factor signature 219 234 7.8E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 PRINTS PR00046 Major sigma-70 factor signature 234 245 7.8E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 PRINTS PR00046 Major sigma-70 factor signature 58 71 7.8E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 PRINTS PR00046 Major sigma-70 factor signature 82 90 7.8E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 249 1.7E-37 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 PIRSF PIRSF000770 2 250 5.3E-32 T 23-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 Pfam PF04542 Sigma-70 region 2 34 100 1.4E-14 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 Pfam PF04539 Sigma-70 region 3 121 186 3.1E-6 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 SUPERFAMILY SSF88659 168 249 3.55E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 Gene3D G3DSA:1.10.10.10 195 249 2.0E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 Gene3D G3DSA:1.10.10.10 102 155 6.0E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 SUPERFAMILY SSF88946 10 102 2.75E-32 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS15380 0dcdfc2996fe864b3b309ac441ebea94 251 Gene3D G3DSA:1.10.601.10 14 100 3.4E-28 T 23-04-2016 CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 PANTHER PTHR37469 38 2882 0.0 T 23-04-2016 CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 SUPERFAMILY SSF74650 1602 1864 5.65E-69 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 SUPERFAMILY SSF74650 2094 2357 2.7E-72 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 Pfam PF06165 Glycosyltransferase family 36 1614 1860 7.6E-70 T 23-04-2016 IPR010383 Glycosyl hydrolase 94 CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 Pfam PF06165 Glycosyltransferase family 36 2117 2356 3.8E-80 T 23-04-2016 IPR010383 Glycosyl hydrolase 94 CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2387 2813 4.0E-140 T 23-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 Gene3D G3DSA:2.60.420.10 2806 2852 6.7E-6 T 23-04-2016 CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 Pfam PF10091 Putative glucoamylase 1350 1564 3.2E-17 T 23-04-2016 IPR019282 Domain of unknown function DUF2329 CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 Gene3D G3DSA:2.70.98.40 1599 1897 7.5E-104 T 23-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 Gene3D G3DSA:2.70.98.40 2095 2416 2.5E-91 T 23-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 SMART SM01068 2094 2159 1.8E-33 T 23-04-2016 IPR009342 Putative carbohydrate binding domain CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 SMART SM01068 1592 1651 1.6E-15 T 23-04-2016 IPR009342 Putative carbohydrate binding domain CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 SUPERFAMILY SSF48208 2366 2881 9.52E-96 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 CLI_RS17065 e1d9d81f4bfef2d09c24cba06f603b08 2882 PANTHER PTHR37469:SF2 38 2882 0.0 T 23-04-2016 CLI_RS15155 22bab203425dde9513c03382467ba8ce 69 Gene3D G3DSA:1.10.260.40 5 63 2.5E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS15155 22bab203425dde9513c03382467ba8ce 69 Pfam PF01381 Helix-turn-helix 7 61 4.3E-10 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS15155 22bab203425dde9513c03382467ba8ce 69 SUPERFAMILY SSF47413 2 65 1.38E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS15155 22bab203425dde9513c03382467ba8ce 69 SMART SM00530 6 61 8.5E-9 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS06215 ec6da214f41fe230ab14aab4387589ab 296 SUPERFAMILY SSF46689 243 290 2.31E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS06215 ec6da214f41fe230ab14aab4387589ab 296 Gene3D G3DSA:2.60.120.280 16 160 1.2E-13 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLI_RS06215 ec6da214f41fe230ab14aab4387589ab 296 Gene3D G3DSA:1.10.10.60 202 243 3.1E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS06215 ec6da214f41fe230ab14aab4387589ab 296 Pfam PF02311 AraC-like ligand binding domain 32 98 8.0E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLI_RS06215 ec6da214f41fe230ab14aab4387589ab 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 289 3.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS06215 ec6da214f41fe230ab14aab4387589ab 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 258 273 3.1E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS06215 ec6da214f41fe230ab14aab4387589ab 296 SUPERFAMILY SSF51215 16 161 1.96E-20 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLI_RS06215 ec6da214f41fe230ab14aab4387589ab 296 PANTHER PTHR11019 3 296 5.8E-142 T 23-04-2016 CLI_RS06215 ec6da214f41fe230ab14aab4387589ab 296 PANTHER PTHR11019:SF91 3 296 5.8E-142 T 23-04-2016 CLI_RS06215 ec6da214f41fe230ab14aab4387589ab 296 Gene3D G3DSA:1.10.10.60 245 290 1.9E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS06215 ec6da214f41fe230ab14aab4387589ab 296 SMART SM00342 206 289 9.9E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS06215 ec6da214f41fe230ab14aab4387589ab 296 Pfam PF12833 Helix-turn-helix domain 212 290 4.2E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS18315 6c640563c2acb19e51e4f38106609026 310 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 10 308 4.6E-118 T 23-04-2016 IPR005911 Protein YhcC-like GO:0051536 CLI_RS18315 6c640563c2acb19e51e4f38106609026 310 Pfam PF16199 Radical_SAM C-terminal domain 214 298 1.9E-27 T 23-04-2016 IPR032432 Radical SAM, C-terminal extension CLI_RS18315 6c640563c2acb19e51e4f38106609026 310 PANTHER PTHR11135:SF1 6 306 2.4E-154 T 23-04-2016 IPR005911 Protein YhcC-like GO:0051536 CLI_RS18315 6c640563c2acb19e51e4f38106609026 310 SUPERFAMILY SSF102114 10 296 1.28E-51 T 23-04-2016 CLI_RS18315 6c640563c2acb19e51e4f38106609026 310 Gene3D G3DSA:3.80.30.20 26 251 1.1E-32 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS18315 6c640563c2acb19e51e4f38106609026 310 PANTHER PTHR11135 6 306 2.4E-154 T 23-04-2016 CLI_RS18315 6c640563c2acb19e51e4f38106609026 310 SMART SM00729 26 253 5.4E-41 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS18315 6c640563c2acb19e51e4f38106609026 310 Pfam PF04055 Radical SAM superfamily 46 208 7.7E-17 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS09980 cfcb1b266c0b8caa19b17d677bab688a 477 Gene3D G3DSA:3.40.50.300 243 474 9.4E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09980 cfcb1b266c0b8caa19b17d677bab688a 477 SUPERFAMILY SSF52540 239 474 8.04E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09980 cfcb1b266c0b8caa19b17d677bab688a 477 PANTHER PTHR24220 3 373 1.9E-262 T 23-04-2016 CLI_RS09980 cfcb1b266c0b8caa19b17d677bab688a 477 SUPERFAMILY SSF52540 2 218 1.64E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09980 cfcb1b266c0b8caa19b17d677bab688a 477 Gene3D G3DSA:3.40.50.300 1 235 3.4E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09980 cfcb1b266c0b8caa19b17d677bab688a 477 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS09980 cfcb1b266c0b8caa19b17d677bab688a 477 Pfam PF00005 ABC transporter 267 412 6.4E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS09980 cfcb1b266c0b8caa19b17d677bab688a 477 Pfam PF00005 ABC transporter 19 169 5.8E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS09980 cfcb1b266c0b8caa19b17d677bab688a 477 SMART SM00382 276 461 5.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS09980 cfcb1b266c0b8caa19b17d677bab688a 477 SMART SM00382 27 223 9.1E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS09980 cfcb1b266c0b8caa19b17d677bab688a 477 PANTHER PTHR24220:SF461 3 373 1.9E-262 T 23-04-2016 CLI_RS08800 34d427f3d8ea14706a666b637cec68a5 288 Pfam PF00583 Acetyltransferase (GNAT) family 201 275 1.7E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS08800 34d427f3d8ea14706a666b637cec68a5 288 Gene3D G3DSA:3.40.630.30 185 280 1.9E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS08800 34d427f3d8ea14706a666b637cec68a5 288 SUPERFAMILY SSF55729 106 280 3.01E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS08800 34d427f3d8ea14706a666b637cec68a5 288 PANTHER PTHR23091:SF275 1 70 3.8E-28 T 23-04-2016 CLI_RS08800 34d427f3d8ea14706a666b637cec68a5 288 PANTHER PTHR23091:SF275 215 286 3.8E-28 T 23-04-2016 CLI_RS08800 34d427f3d8ea14706a666b637cec68a5 288 PANTHER PTHR23091 1 70 3.8E-28 T 23-04-2016 CLI_RS08800 34d427f3d8ea14706a666b637cec68a5 288 PANTHER PTHR23091 215 286 3.8E-28 T 23-04-2016 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 PANTHER PTHR19375:SF185 3 327 1.7E-173 T 23-04-2016 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 2.5E-56 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 2.5E-56 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 2.5E-56 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 2.5E-56 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 2.5E-56 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 SUPERFAMILY SSF53067 144 328 1.57E-48 T 23-04-2016 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 Gene3D G3DSA:3.90.640.10 182 253 5.4E-32 T 23-04-2016 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 PANTHER PTHR19375 3 327 1.7E-173 T 23-04-2016 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 Gene3D G3DSA:3.30.420.40 258 312 8.1E-32 T 23-04-2016 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 Gene3D G3DSA:3.30.420.40 155 181 8.1E-32 T 23-04-2016 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 SUPERFAMILY SSF53067 7 141 3.89E-42 T 23-04-2016 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 Pfam PF06723 MreB/Mbl protein 7 330 8.9E-150 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 330 2.6E-142 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS00955 2107e8f1c53489ceeef648fca84fed28 342 Gene3D G3DSA:3.30.420.40 6 154 1.6E-47 T 23-04-2016 CLI_RS16275 51e16bb61d66638a511588b6d86f736f 259 Gene3D G3DSA:3.40.50.620 1 258 1.6E-96 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS16275 51e16bb61d66638a511588b6d86f736f 259 PANTHER PTHR21294 1 259 1.1E-123 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 CLI_RS16275 51e16bb61d66638a511588b6d86f736f 259 PIRSF PIRSF000090 1 259 4.1E-98 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 CLI_RS16275 51e16bb61d66638a511588b6d86f736f 259 Pfam PF01012 Electron transfer flavoprotein domain 23 206 8.7E-53 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS16275 51e16bb61d66638a511588b6d86f736f 259 PANTHER PTHR21294:SF0 1 259 1.1E-123 T 23-04-2016 CLI_RS16275 51e16bb61d66638a511588b6d86f736f 259 SMART SM00893 22 211 3.3E-66 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS16275 51e16bb61d66638a511588b6d86f736f 259 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 23-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 CLI_RS16275 51e16bb61d66638a511588b6d86f736f 259 SUPERFAMILY SSF52402 1 255 3.91E-82 T 23-04-2016 CLI_RS02795 8c8623e2a9ebd0579822b0fc55e7a04d 317 SUPERFAMILY SSF52283 1 180 1.02E-27 T 23-04-2016 CLI_RS02795 8c8623e2a9ebd0579822b0fc55e7a04d 317 Gene3D G3DSA:3.40.50.1770 1 181 2.5E-27 T 23-04-2016 CLI_RS02795 8c8623e2a9ebd0579822b0fc55e7a04d 317 SMART SM01003 4 111 4.3E-7 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CLI_RS02795 8c8623e2a9ebd0579822b0fc55e7a04d 317 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 195 297 2.2E-11 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CLI_RS02795 8c8623e2a9ebd0579822b0fc55e7a04d 317 SUPERFAMILY SSF51735 143 279 1.41E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS02795 8c8623e2a9ebd0579822b0fc55e7a04d 317 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 10 95 2.6E-16 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CLI_RS02795 8c8623e2a9ebd0579822b0fc55e7a04d 317 PANTHER PTHR10160 1 93 1.5E-27 T 23-04-2016 CLI_RS02795 8c8623e2a9ebd0579822b0fc55e7a04d 317 Gene3D G3DSA:3.40.50.720 198 280 4.0E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS02795 8c8623e2a9ebd0579822b0fc55e7a04d 317 SMART SM01002 147 273 8.3E-7 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CLI_RS00190 36ccde2f0b9630cacceed3fa9363f75a 198 PANTHER PTHR30446 2 198 5.0E-116 T 23-04-2016 CLI_RS00190 36ccde2f0b9630cacceed3fa9363f75a 198 SUPERFAMILY SSF111304 4 198 1.83E-76 T 23-04-2016 IPR023627 Recombination protein RecR CLI_RS00190 36ccde2f0b9630cacceed3fa9363f75a 198 TIGRFAM TIGR00615 recR: recombination protein RecR 4 195 1.4E-80 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CLI_RS00190 36ccde2f0b9630cacceed3fa9363f75a 198 Pfam PF13662 Toprim domain 81 171 3.3E-24 T 23-04-2016 IPR006171 Toprim domain CLI_RS00190 36ccde2f0b9630cacceed3fa9363f75a 198 SMART SM00493 81 165 7.2E-15 T 23-04-2016 IPR006171 Toprim domain CLI_RS00190 36ccde2f0b9630cacceed3fa9363f75a 198 Pfam PF02132 RecR protein 40 79 1.2E-17 T 23-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger CLI_RS00190 36ccde2f0b9630cacceed3fa9363f75a 198 Gene3D G3DSA:3.40.50.140 120 170 2.3E-5 T 23-04-2016 IPR006171 Toprim domain CLI_RS00190 36ccde2f0b9630cacceed3fa9363f75a 198 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 23-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CLI_RS00190 36ccde2f0b9630cacceed3fa9363f75a 198 PANTHER PTHR30446:SF0 2 198 5.0E-116 T 23-04-2016 CLI_RS00190 36ccde2f0b9630cacceed3fa9363f75a 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 105.596 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CLI_RS16085 ade98c60504fc4005931be9a3868ec88 278 TIGRFAM TIGR01714 phage_rep_org_N: phage replisome organizer, putative, N-terminal region 9 122 1.4E-33 T 23-04-2016 IPR010056 Phage replisome organiser, N-terminal domain CLI_RS16085 ade98c60504fc4005931be9a3868ec88 278 Pfam PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 9 124 1.4E-30 T 23-04-2016 IPR010056 Phage replisome organiser, N-terminal domain CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 Pfam PF08453 Peptidase family M9 N-terminal 73 254 6.5E-52 T 23-04-2016 IPR013661 Peptidase M9, collagenase, N-terminal domain CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 Gene3D G3DSA:2.60.40.670 752 834 7.5E-22 T 23-04-2016 IPR000601 PKD domain CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 PANTHER PTHR13062:SF9 5 1136 6.2E-241 T 23-04-2016 CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 SUPERFAMILY SSF89260 841 952 2.62E-16 T 23-04-2016 CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 SUPERFAMILY SSF49299 765 834 2.62E-20 T 23-04-2016 IPR000601 PKD domain CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 SMART SM00089 756 835 2.6E-19 T 23-04-2016 IPR022409 PKD/Chitinase domain CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 Pfam PF01752 Collagenase 331 606 1.1E-85 T 23-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 426 440 5.37E-27 T 23-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 139 157 5.37E-27 T 23-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 443 459 5.37E-27 T 23-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 480 498 5.37E-27 T 23-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 PANTHER PTHR13062 5 1136 6.2E-241 T 23-04-2016 CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 SUPERFAMILY SSF89260 973 1086 1.31E-14 T 23-04-2016 CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 Pfam PF00801 PKD domain 770 822 1.5E-14 T 23-04-2016 IPR000601 PKD domain CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 1130 1195 4.8E-6 T 23-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 SUPERFAMILY SSF89260 1096 1208 2.09E-33 T 23-04-2016 CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 Gene3D G3DSA:2.60.120.380 838 955 1.0E-24 T 23-04-2016 CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 Gene3D G3DSA:2.60.120.380 971 1087 8.3E-22 T 23-04-2016 CLI_RS08315 af4b56ccae726bd33def3940b21f9fcf 1209 Gene3D G3DSA:2.60.120.380 1095 1209 3.7E-32 T 23-04-2016 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 500 44.734 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 Gene3D G3DSA:2.40.50.140 16 149 7.2E-45 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS18100 67bba212c070c998b872e36a9c712205 504 SUPERFAMILY SSF50249 14 149 1.05E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS18100 67bba212c070c998b872e36a9c712205 504 PANTHER PTHR22594 2 500 7.3E-277 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 2.0E-39 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 2.0E-39 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 2.0E-39 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 382 398 2.0E-39 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 2.0E-39 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 PANTHER PTHR22594:SF4 2 500 7.3E-277 T 23-04-2016 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 PIRSF PIRSF039101 2 504 4.0E-200 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 500 6.6E-205 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 Gene3D G3DSA:3.30.930.10 151 496 2.3E-120 T 23-04-2016 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 Pfam PF01336 OB-fold nucleic acid binding domain 63 139 3.3E-15 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 SUPERFAMILY SSF55681 156 498 4.27E-121 T 23-04-2016 CLI_RS18100 67bba212c070c998b872e36a9c712205 504 Pfam PF00152 tRNA synthetases class II (D, K and N) 157 497 1.6E-82 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS05905 3e37356ea054ce8fcf245d8e2ce54d50 1429 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 323 576 3.1E-40 T 23-04-2016 IPR008275 CoA enzyme activase CLI_RS05905 3e37356ea054ce8fcf245d8e2ce54d50 1429 SUPERFAMILY SSF53067 322 577 1.4E-53 T 23-04-2016 CLI_RS05905 3e37356ea054ce8fcf245d8e2ce54d50 1429 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 255 2.7E-20 T 23-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS05905 3e37356ea054ce8fcf245d8e2ce54d50 1429 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 323 577 1.5E-37 T 23-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS05905 3e37356ea054ce8fcf245d8e2ce54d50 1429 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 673 891 1.4E-78 T 23-04-2016 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLI_RS05905 3e37356ea054ce8fcf245d8e2ce54d50 1429 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 906 1226 7.3E-57 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS05905 3e37356ea054ce8fcf245d8e2ce54d50 1429 SUPERFAMILY SSF53067 7 255 2.5E-56 T 23-04-2016 CLI_RS05905 3e37356ea054ce8fcf245d8e2ce54d50 1429 PANTHER PTHR32329 5 1429 0.0 T 23-04-2016 CLI_RS05905 3e37356ea054ce8fcf245d8e2ce54d50 1429 Gene3D G3DSA:3.30.420.40 99 235 1.5E-44 T 23-04-2016 CLI_RS05905 3e37356ea054ce8fcf245d8e2ce54d50 1429 Gene3D G3DSA:3.30.420.40 417 559 2.1E-48 T 23-04-2016 CLI_RS05905 3e37356ea054ce8fcf245d8e2ce54d50 1429 PANTHER PTHR32329:SF4 5 1429 0.0 T 23-04-2016 CLI_RS01405 7bad60ac1a3f2682dcde9cae5ba44651 227 SMART SM00862 151 226 6.9E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS01405 7bad60ac1a3f2682dcde9cae5ba44651 227 Pfam PF00072 Response regulator receiver domain 8 115 6.9E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01405 7bad60ac1a3f2682dcde9cae5ba44651 227 PANTHER PTHR26402 5 224 1.8E-103 T 23-04-2016 CLI_RS01405 7bad60ac1a3f2682dcde9cae5ba44651 227 SUPERFAMILY SSF46894 127 226 3.68E-25 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS01405 7bad60ac1a3f2682dcde9cae5ba44651 227 PANTHER PTHR26402:SF519 5 224 1.8E-103 T 23-04-2016 CLI_RS01405 7bad60ac1a3f2682dcde9cae5ba44651 227 SUPERFAMILY SSF52172 3 129 2.28E-35 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS01405 7bad60ac1a3f2682dcde9cae5ba44651 227 Gene3D G3DSA:3.40.50.2300 3 129 3.1E-36 T 23-04-2016 CLI_RS01405 7bad60ac1a3f2682dcde9cae5ba44651 227 SMART SM00448 5 115 4.7E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01405 7bad60ac1a3f2682dcde9cae5ba44651 227 Gene3D G3DSA:1.10.10.10 130 226 1.6E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01405 7bad60ac1a3f2682dcde9cae5ba44651 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 5.4E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS08035 f4b95a4e8014badcfc40c347e3682206 212 SUPERFAMILY SSF51569 1 211 3.77E-85 T 23-04-2016 CLI_RS08035 f4b95a4e8014badcfc40c347e3682206 212 SMART SM01133 2 212 2.4E-100 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 CLI_RS08035 f4b95a4e8014badcfc40c347e3682206 212 PANTHER PTHR10889 1 212 3.2E-116 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 CLI_RS08035 f4b95a4e8014badcfc40c347e3682206 212 Gene3D G3DSA:3.20.20.70 1 211 4.4E-94 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS08035 f4b95a4e8014badcfc40c347e3682206 212 PIRSF PIRSF001357 1 212 1.0E-78 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 CLI_RS08035 f4b95a4e8014badcfc40c347e3682206 212 Pfam PF01791 DeoC/LacD family aldolase 5 207 2.9E-23 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 CLI_RS08035 f4b95a4e8014badcfc40c347e3682206 212 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 210 1.8E-91 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 CLI_RS08035 f4b95a4e8014badcfc40c347e3682206 212 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 212 36.016 T 23-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 CLI_RS15765 2b8370f1f465888aa5e86848949642f2 250 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 46 234 3.7E-74 T 23-04-2016 IPR014132 Sporulation polysaccharide deacetylase, PdaB KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- CLI_RS15765 2b8370f1f465888aa5e86848949642f2 250 SUPERFAMILY SSF88713 13 234 4.89E-64 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLI_RS15765 2b8370f1f465888aa5e86848949642f2 250 Pfam PF01522 Polysaccharide deacetylase 47 167 1.9E-35 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS15765 2b8370f1f465888aa5e86848949642f2 250 PANTHER PTHR10587 36 246 4.4E-116 T 23-04-2016 CLI_RS15765 2b8370f1f465888aa5e86848949642f2 250 Gene3D G3DSA:3.20.20.370 11 235 2.0E-69 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS15765 2b8370f1f465888aa5e86848949642f2 250 PANTHER PTHR10587:SF78 36 246 4.4E-116 T 23-04-2016 CLI_RS08640 751eacb3c30c5825b0590380807b1a61 69 SMART SM00357 5 69 8.7E-20 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CLI_RS08640 751eacb3c30c5825b0590380807b1a61 69 Gene3D G3DSA:2.40.50.140 3 68 1.2E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08640 751eacb3c30c5825b0590380807b1a61 69 PIRSF PIRSF002599 1 69 3.1E-19 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 CLI_RS08640 751eacb3c30c5825b0590380807b1a61 69 PANTHER PTHR11544 1 69 4.6E-17 T 23-04-2016 CLI_RS08640 751eacb3c30c5825b0590380807b1a61 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 7.7E-23 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLI_RS08640 751eacb3c30c5825b0590380807b1a61 69 PRINTS PR00050 Cold shock protein signature 26 35 1.1E-14 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLI_RS08640 751eacb3c30c5825b0590380807b1a61 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-14 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLI_RS08640 751eacb3c30c5825b0590380807b1a61 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-14 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLI_RS08640 751eacb3c30c5825b0590380807b1a61 69 SUPERFAMILY SSF50249 2 68 2.74E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS05130 d46722a6706fd5a2514edcb07054e9c7 376 Gene3D G3DSA:1.20.1090.10 158 374 8.7E-68 T 23-04-2016 CLI_RS05130 d46722a6706fd5a2514edcb07054e9c7 376 PIRSF PIRSF000112 1 370 2.7E-84 T 23-04-2016 CLI_RS05130 d46722a6706fd5a2514edcb07054e9c7 376 PANTHER PTHR11496:SF57 200 371 8.5E-188 T 23-04-2016 CLI_RS05130 d46722a6706fd5a2514edcb07054e9c7 376 PANTHER PTHR11496:SF57 1 179 8.5E-188 T 23-04-2016 CLI_RS05130 d46722a6706fd5a2514edcb07054e9c7 376 SUPERFAMILY SSF56796 3 366 2.36E-77 T 23-04-2016 CLI_RS05130 d46722a6706fd5a2514edcb07054e9c7 376 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 358 4.6E-59 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 CLI_RS05130 d46722a6706fd5a2514edcb07054e9c7 376 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 148 176 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLI_RS05130 d46722a6706fd5a2514edcb07054e9c7 376 PANTHER PTHR11496 200 371 8.5E-188 T 23-04-2016 CLI_RS05130 d46722a6706fd5a2514edcb07054e9c7 376 PANTHER PTHR11496 1 179 8.5E-188 T 23-04-2016 CLI_RS05130 d46722a6706fd5a2514edcb07054e9c7 376 Gene3D G3DSA:3.40.50.1970 1 157 2.2E-34 T 23-04-2016 CLI_RS08600 ae601b5d048aef5b7b4c5ba295f7667b 459 Gene3D G3DSA:1.20.1250.20 243 450 1.2E-8 T 23-04-2016 CLI_RS08600 ae601b5d048aef5b7b4c5ba295f7667b 459 Gene3D G3DSA:1.20.1250.20 20 210 1.2E-19 T 23-04-2016 CLI_RS08600 ae601b5d048aef5b7b4c5ba295f7667b 459 SUPERFAMILY SSF103473 8 452 5.75E-40 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS08600 ae601b5d048aef5b7b4c5ba295f7667b 459 PANTHER PTHR11654 2 458 1.9E-159 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS08600 ae601b5d048aef5b7b4c5ba295f7667b 459 Pfam PF00854 POT family 241 423 2.2E-29 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS08600 ae601b5d048aef5b7b4c5ba295f7667b 459 Pfam PF00854 POT family 86 207 3.1E-12 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS08600 ae601b5d048aef5b7b4c5ba295f7667b 459 PANTHER PTHR11654:SF119 2 458 1.9E-159 T 23-04-2016 CLI_RS08600 ae601b5d048aef5b7b4c5ba295f7667b 459 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 8 172 2.4E-38 T 23-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CLI_RS05260 73103f7dd58adabc222435c07089eae1 424 Pfam PF09861 Domain of unknown function (DUF2088) 8 213 4.9E-78 T 23-04-2016 IPR018657 Domain of unknown function DUF2088 CLI_RS05260 73103f7dd58adabc222435c07089eae1 424 PANTHER PTHR33171:SF3 1 408 8.9E-181 T 23-04-2016 CLI_RS05260 73103f7dd58adabc222435c07089eae1 424 PANTHER PTHR33171 1 408 8.9E-181 T 23-04-2016 CLI_RS11200 b58cd6cde845c5f0e850af598a8fd17a 239 PANTHER PTHR24220:SF432 3 236 2.1E-119 T 23-04-2016 CLI_RS11200 b58cd6cde845c5f0e850af598a8fd17a 239 Gene3D G3DSA:3.40.50.300 1 227 9.8E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11200 b58cd6cde845c5f0e850af598a8fd17a 239 Pfam PF00005 ABC transporter 19 162 9.0E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS11200 b58cd6cde845c5f0e850af598a8fd17a 239 PANTHER PTHR24220 3 236 2.1E-119 T 23-04-2016 CLI_RS11200 b58cd6cde845c5f0e850af598a8fd17a 239 SUPERFAMILY SSF52540 2 230 1.93E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11200 b58cd6cde845c5f0e850af598a8fd17a 239 SMART SM00382 27 213 4.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06500 bf25085b092b24436511c2b052b90035 486 Gene3D G3DSA:3.40.605.10 12 273 8.9E-91 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CLI_RS06500 bf25085b092b24436511c2b052b90035 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CLI_RS06500 bf25085b092b24436511c2b052b90035 486 PANTHER PTHR11699 12 484 0.0 T 23-04-2016 CLI_RS06500 bf25085b092b24436511c2b052b90035 486 PANTHER PTHR11699:SF160 12 484 0.0 T 23-04-2016 CLI_RS06500 bf25085b092b24436511c2b052b90035 486 Pfam PF00171 Aldehyde dehydrogenase family 20 480 1.3E-163 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CLI_RS06500 bf25085b092b24436511c2b052b90035 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CLI_RS06500 bf25085b092b24436511c2b052b90035 486 SUPERFAMILY SSF53720 8 483 1.96E-152 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CLI_RS06500 bf25085b092b24436511c2b052b90035 486 Gene3D G3DSA:3.40.309.10 274 456 6.5E-69 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLI_RS16915 5abc5b89cab047b4cf2c38faaadb0ca2 210 SMART SM00881 81 181 4.6E-20 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CLI_RS16915 5abc5b89cab047b4cf2c38faaadb0ca2 210 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 2 210 36.211 T 23-04-2016 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 CLI_RS16915 5abc5b89cab047b4cf2c38faaadb0ca2 210 PANTHER PTHR35786 1 210 1.7E-106 T 23-04-2016 CLI_RS16915 5abc5b89cab047b4cf2c38faaadb0ca2 210 PANTHER PTHR35786:SF1 1 210 1.7E-106 T 23-04-2016 CLI_RS16915 5abc5b89cab047b4cf2c38faaadb0ca2 210 SUPERFAMILY SSF51735 82 207 3.35E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16915 5abc5b89cab047b4cf2c38faaadb0ca2 210 Gene3D G3DSA:1.10.10.10 5 76 7.0E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS16915 5abc5b89cab047b4cf2c38faaadb0ca2 210 SUPERFAMILY SSF46785 10 80 1.32E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS16915 5abc5b89cab047b4cf2c38faaadb0ca2 210 Gene3D G3DSA:3.40.50.720 78 209 1.0E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16915 5abc5b89cab047b4cf2c38faaadb0ca2 210 Pfam PF06971 Putative DNA-binding protein N-terminus 6 54 8.3E-21 T 23-04-2016 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 CLI_RS16915 5abc5b89cab047b4cf2c38faaadb0ca2 210 Pfam PF02629 CoA binding domain 83 179 8.7E-24 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CLI_RS02055 2ec845a9171fc7dba6ea8ae1c91ab221 223 Pfam PF04205 FMN-binding domain 91 178 1.5E-22 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 CLI_RS02055 2ec845a9171fc7dba6ea8ae1c91ab221 223 PIRSF PIRSF006091 1 195 6.5E-51 T 23-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CLI_RS02055 2ec845a9171fc7dba6ea8ae1c91ab221 223 PANTHER PTHR36118 2 200 3.3E-73 T 23-04-2016 CLI_RS02055 2ec845a9171fc7dba6ea8ae1c91ab221 223 SMART SM00900 91 181 9.0E-31 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 CLI_RS02055 2ec845a9171fc7dba6ea8ae1c91ab221 223 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 3 183 25.584 T 23-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CLI_RS02055 2ec845a9171fc7dba6ea8ae1c91ab221 223 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 10 182 1.6E-41 T 23-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CLI_RS02055 2ec845a9171fc7dba6ea8ae1c91ab221 223 PANTHER PTHR36118:SF1 2 200 3.3E-73 T 23-04-2016 CLI_RS02545 4a114a344dad646b81ecf040e4ed4172 258 PANTHER PTHR37954 1 249 2.2E-130 T 23-04-2016 CLI_RS02545 4a114a344dad646b81ecf040e4ed4172 258 PANTHER PTHR37954:SF1 1 249 2.2E-130 T 23-04-2016 CLI_RS02545 4a114a344dad646b81ecf040e4ed4172 258 Pfam PF02596 Uncharacterised ArCR, COG2043 10 216 9.1E-49 T 23-04-2016 IPR003748 Protein of unknown function DUF169 CLI_RS13750 0a2bf33a03cf569084828620f5d36269 467 Gene3D G3DSA:3.40.30.10 14 151 9.7E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS13750 0a2bf33a03cf569084828620f5d36269 467 SUPERFAMILY SSF101898 176 465 1.44E-30 T 23-04-2016 CLI_RS13750 0a2bf33a03cf569084828620f5d36269 467 Gene3D G3DSA:2.120.10.30 175 466 7.0E-44 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS13750 0a2bf33a03cf569084828620f5d36269 467 PANTHER PTHR13833 9 466 1.8E-161 T 23-04-2016 CLI_RS13750 0a2bf33a03cf569084828620f5d36269 467 SUPERFAMILY SSF52833 14 148 1.16E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS13750 0a2bf33a03cf569084828620f5d36269 467 PANTHER PTHR13833:SF38 9 466 1.8E-161 T 23-04-2016 CLI_RS13750 0a2bf33a03cf569084828620f5d36269 467 Pfam PF13905 Thioredoxin-like 37 129 5.6E-14 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS06575 86c0a27c0cfdd56d6885e1c0ab0c678c 349 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 6 336 1.4E-139 T 23-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 CLI_RS06575 86c0a27c0cfdd56d6885e1c0ab0c678c 349 SUPERFAMILY SSF100950 6 342 1.19E-118 T 23-04-2016 CLI_RS06575 86c0a27c0cfdd56d6885e1c0ab0c678c 349 Gene3D G3DSA:3.40.50.10470 158 343 8.7E-71 T 23-04-2016 CLI_RS06575 86c0a27c0cfdd56d6885e1c0ab0c678c 349 PANTHER PTHR10233:SF6 1 349 2.1E-166 T 23-04-2016 CLI_RS06575 86c0a27c0cfdd56d6885e1c0ab0c678c 349 PANTHER PTHR10233 1 349 2.1E-166 T 23-04-2016 CLI_RS06575 86c0a27c0cfdd56d6885e1c0ab0c678c 349 Pfam PF01008 Initiation factor 2 subunit family 48 337 3.3E-80 T 23-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 CLI_RS06575 86c0a27c0cfdd56d6885e1c0ab0c678c 349 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 35 337 1.9E-114 T 23-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 CLI_RS06575 86c0a27c0cfdd56d6885e1c0ab0c678c 349 Gene3D G3DSA:1.20.120.420 6 157 3.4E-53 T 23-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 CLI_RS06575 86c0a27c0cfdd56d6885e1c0ab0c678c 349 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 3 347 38.338 T 23-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 CLI_RS15555 f5c2dc4b4ce138119bb147f44c82ee57 156 PANTHER PTHR30087 1 154 2.4E-75 T 23-04-2016 CLI_RS15555 f5c2dc4b4ce138119bb147f44c82ee57 156 PANTHER PTHR30087:SF1 1 154 2.4E-75 T 23-04-2016 CLI_RS15555 f5c2dc4b4ce138119bb147f44c82ee57 156 Pfam PF04463 Protein of unknown function (DUF523) 2 145 2.7E-43 T 23-04-2016 IPR007553 Domain of unknown function DUF523 CLI_RS00850 3f104bd5dc09fb52b7ee24af244529de 351 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 10 208 8.5E-69 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 CLI_RS00850 3f104bd5dc09fb52b7ee24af244529de 351 Pfam PF03481 Putative GTP-binding controlling metal-binding 201 344 9.4E-27 T 23-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain CLI_RS00850 3f104bd5dc09fb52b7ee24af244529de 351 PANTHER PTHR17490:SF3 4 348 1.5E-130 T 23-04-2016 CLI_RS00850 3f104bd5dc09fb52b7ee24af244529de 351 Pfam PF01300 Telomere recombination 24 199 1.8E-57 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 CLI_RS00850 3f104bd5dc09fb52b7ee24af244529de 351 Gene3D G3DSA:3.90.870.10 4 205 3.5E-77 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS00850 3f104bd5dc09fb52b7ee24af244529de 351 PIRSF PIRSF004930 1 350 3.5E-131 T 23-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CLI_RS00850 3f104bd5dc09fb52b7ee24af244529de 351 PANTHER PTHR17490 4 348 1.5E-130 T 23-04-2016 CLI_RS00850 3f104bd5dc09fb52b7ee24af244529de 351 SUPERFAMILY SSF55821 7 210 5.19E-65 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS06700 7ca5dfdb771809d84c17d9712892f6ec 217 PANTHER PTHR10683 1 215 4.0E-87 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CLI_RS06700 7ca5dfdb771809d84c17d9712892f6ec 217 Hamap MF_00494 Probable transaldolase [tal]. 1 214 46.688 T 23-04-2016 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CLI_RS06700 7ca5dfdb771809d84c17d9712892f6ec 217 SUPERFAMILY SSF51569 1 213 5.13E-79 T 23-04-2016 CLI_RS06700 7ca5dfdb771809d84c17d9712892f6ec 217 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 213 4.4E-99 T 23-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CLI_RS06700 7ca5dfdb771809d84c17d9712892f6ec 217 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CLI_RS06700 7ca5dfdb771809d84c17d9712892f6ec 217 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CLI_RS06700 7ca5dfdb771809d84c17d9712892f6ec 217 Gene3D G3DSA:3.20.20.70 1 212 1.1E-72 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS06700 7ca5dfdb771809d84c17d9712892f6ec 217 Pfam PF00923 Transaldolase 3 207 3.2E-60 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CLI_RS04815 02c901b457cd4a93bc4b865b9fbe25b7 254 Gene3D G3DSA:1.10.490.50 164 252 2.0E-31 T 23-04-2016 IPR012925 TipAS antibiotic-recognition domain CLI_RS04815 02c901b457cd4a93bc4b865b9fbe25b7 254 SMART SM00422 3 72 2.7E-29 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04815 02c901b457cd4a93bc4b865b9fbe25b7 254 PANTHER PTHR30204 1 251 5.5E-94 T 23-04-2016 CLI_RS04815 02c901b457cd4a93bc4b865b9fbe25b7 254 Gene3D G3DSA:1.10.1660.10 3 116 3.0E-31 T 23-04-2016 CLI_RS04815 02c901b457cd4a93bc4b865b9fbe25b7 254 Pfam PF07739 TipAS antibiotic-recognition domain 135 249 1.0E-38 T 23-04-2016 IPR012925 TipAS antibiotic-recognition domain CLI_RS04815 02c901b457cd4a93bc4b865b9fbe25b7 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 6.9E-5 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04815 02c901b457cd4a93bc4b865b9fbe25b7 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 6.9E-5 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04815 02c901b457cd4a93bc4b865b9fbe25b7 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 6.9E-5 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04815 02c901b457cd4a93bc4b865b9fbe25b7 254 SUPERFAMILY SSF89082 164 251 2.88E-29 T 23-04-2016 IPR012925 TipAS antibiotic-recognition domain CLI_RS04815 02c901b457cd4a93bc4b865b9fbe25b7 254 PANTHER PTHR30204:SF27 1 251 5.5E-94 T 23-04-2016 CLI_RS04815 02c901b457cd4a93bc4b865b9fbe25b7 254 Pfam PF13411 MerR HTH family regulatory protein 3 71 9.8E-17 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04815 02c901b457cd4a93bc4b865b9fbe25b7 254 SUPERFAMILY SSF46955 3 115 1.03E-28 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS01830 48c319d0284d1583558e2941e9677d37 231 PANTHER PTHR30249:SF5 1 231 3.6E-109 T 23-04-2016 CLI_RS01830 48c319d0284d1583558e2941e9677d37 231 PANTHER PTHR30249 1 231 3.6E-109 T 23-04-2016 CLI_RS01830 48c319d0284d1583558e2941e9677d37 231 Pfam PF04172 LrgB-like family 16 228 1.9E-78 T 23-04-2016 IPR007300 CidB/LrgB family CLI_RS06465 17dec94d91f2a2b2ffca4da0250e2eb4 478 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 97 112 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06465 17dec94d91f2a2b2ffca4da0250e2eb4 478 PANTHER PTHR30330:SF1 1 474 5.6E-301 T 23-04-2016 CLI_RS06465 17dec94d91f2a2b2ffca4da0250e2eb4 478 Pfam PF01235 Sodium:alanine symporter family 60 454 3.8E-167 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06465 17dec94d91f2a2b2ffca4da0250e2eb4 478 PANTHER PTHR30330 1 474 5.6E-301 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06465 17dec94d91f2a2b2ffca4da0250e2eb4 478 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 442 2.9E-161 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06465 17dec94d91f2a2b2ffca4da0250e2eb4 478 PRINTS PR00175 Sodium/alanine symporter signature 187 205 1.1E-61 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06465 17dec94d91f2a2b2ffca4da0250e2eb4 478 PRINTS PR00175 Sodium/alanine symporter signature 411 431 1.1E-61 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06465 17dec94d91f2a2b2ffca4da0250e2eb4 478 PRINTS PR00175 Sodium/alanine symporter signature 306 324 1.1E-61 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06465 17dec94d91f2a2b2ffca4da0250e2eb4 478 PRINTS PR00175 Sodium/alanine symporter signature 215 234 1.1E-61 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06465 17dec94d91f2a2b2ffca4da0250e2eb4 478 PRINTS PR00175 Sodium/alanine symporter signature 351 373 1.1E-61 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06465 17dec94d91f2a2b2ffca4da0250e2eb4 478 PRINTS PR00175 Sodium/alanine symporter signature 97 119 1.1E-61 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 288 5.5E-48 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 488 664 3.2E-26 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 Pfam PF00929 Exonuclease 496 652 3.1E-25 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 Gene3D G3DSA:3.40.50.300 768 853 6.0E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 Gene3D G3DSA:3.40.50.300 299 417 6.0E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 SUPERFAMILY SSF52540 183 455 2.87E-97 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 SUPERFAMILY SSF52540 666 850 2.87E-97 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 SUPERFAMILY SSF52540 5 152 2.87E-97 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 Gene3D G3DSA:1.10.486.10 418 475 1.2E-15 T 23-04-2016 CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 Gene3D G3DSA:3.30.420.10 489 658 1.5E-45 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 Pfam PF13361 UvrD-like helicase C-terminal domain 295 831 6.9E-102 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 SMART SM00479 494 662 6.7E-27 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 PANTHER PTHR11070:SF7 744 853 6.6E-126 T 23-04-2016 CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 PANTHER PTHR11070:SF7 6 533 6.6E-126 T 23-04-2016 CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 Gene3D G3DSA:3.40.50.300 193 290 6.7E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 Gene3D G3DSA:3.40.50.300 6 146 6.7E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 SUPERFAMILY SSF53098 494 719 1.02E-45 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 PANTHER PTHR11070 744 853 6.6E-126 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS06880 7ba200e738fc674f332c199eba6dfabc 855 PANTHER PTHR11070 6 533 6.6E-126 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 SUPERFAMILY SSF51419 30 296 8.87E-80 T 23-04-2016 IPR029066 PLP-binding barrel CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 300 404 6.7E-14 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 195 208 2.0E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 80 92 2.0E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 284 303 2.0E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 385 398 2.0E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 60 78 2.0E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 18 428 38.457 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 428 9.5E-143 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 Gene3D G3DSA:2.40.37.10 290 406 2.1E-27 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 PANTHER PTHR11482:SF5 10 427 3.7E-158 T 23-04-2016 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 PANTHER PTHR11482 10 427 3.7E-158 T 23-04-2016 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 SUPERFAMILY SSF50621 276 428 2.51E-47 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 42 294 1.9E-59 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 PRINTS PR01181 Diaminopimelate decarboxylase signature 78 95 4.2E-22 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 PRINTS PR01181 Diaminopimelate decarboxylase signature 395 417 4.2E-22 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 PRINTS PR01181 Diaminopimelate decarboxylase signature 313 331 4.2E-22 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 PRINTS PR01181 Diaminopimelate decarboxylase signature 167 176 4.2E-22 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS17070 44a2cfc234c730ed57c2849e43c3df76 428 Gene3D G3DSA:3.20.20.10 39 289 1.6E-80 T 23-04-2016 IPR029066 PLP-binding barrel CLI_RS14380 d26033c6a6dcc7d13502b3810688f98e 468 TIGRFAM TIGR03173 pbuX: xanthine permease 24 438 1.0E-162 T 23-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CLI_RS14380 d26033c6a6dcc7d13502b3810688f98e 468 PANTHER PTHR11119:SF3 1 438 5.5E-123 T 23-04-2016 CLI_RS14380 d26033c6a6dcc7d13502b3810688f98e 468 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 353 373 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 CLI_RS14380 d26033c6a6dcc7d13502b3810688f98e 468 PANTHER PTHR11119 1 438 5.5E-123 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS14380 d26033c6a6dcc7d13502b3810688f98e 468 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 435 8.1E-114 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 CLI_RS14380 d26033c6a6dcc7d13502b3810688f98e 468 Pfam PF00860 Permease family 20 405 6.6E-102 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS15645 dc56e11fa99c3a09c0d2f043c68e15dd 299 Pfam PF08812 YtxC-like family 67 282 6.5E-64 T 23-04-2016 IPR014199 Sporulation protein YtxC CLI_RS15645 dc56e11fa99c3a09c0d2f043c68e15dd 299 TIGRFAM TIGR02834 spo_ytxC: putative sporulation protein YtxC 6 283 2.3E-73 T 23-04-2016 IPR014199 Sporulation protein YtxC CLI_RS06200 d106743b3d4010013202f6d4e48e849e 415 PANTHER PTHR32507:SF10 1 413 8.7E-149 T 23-04-2016 CLI_RS06200 d106743b3d4010013202f6d4e48e849e 415 PANTHER PTHR32507 1 413 8.7E-149 T 23-04-2016 CLI_RS06200 d106743b3d4010013202f6d4e48e849e 415 Pfam PF00999 Sodium/hydrogen exchanger family 11 383 2.3E-23 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 84 299 7.2E-50 T 23-04-2016 IPR004108 Iron hydrogenase, large subunit, C-terminal CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 SMART SM00091 411 477 0.0051 T 23-04-2016 IPR000014 PAS domain CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 PANTHER PTHR11615 303 335 4.3E-103 T 23-04-2016 CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 PANTHER PTHR11615 1 243 4.3E-103 T 23-04-2016 CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 PANTHER PTHR11615 357 544 4.3E-103 T 23-04-2016 CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 SUPERFAMILY SSF53920 39 329 3.01E-54 T 23-04-2016 IPR009016 Iron hydrogenase CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 SUPERFAMILY SSF54862 10 73 5.23E-17 T 23-04-2016 CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 Gene3D G3DSA:3.30.450.20 408 486 3.3E-11 T 23-04-2016 CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 SUPERFAMILY SSF55785 409 489 4.95E-7 T 23-04-2016 IPR000014 PAS domain CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 Pfam PF04060 Putative Fe-S cluster 374 402 6.6E-7 T 23-04-2016 IPR007202 4Fe-4S domain GO:0051536 CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 11 22 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 Gene3D G3DSA:3.30.70.20 9 29 8.9E-4 T 23-04-2016 CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 Gene3D G3DSA:3.40.50.1780 30 97 7.6E-40 T 23-04-2016 CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 Gene3D G3DSA:3.40.50.1780 136 248 7.6E-40 T 23-04-2016 CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 Pfam PF12838 4Fe-4S dicluster domain 11 54 6.9E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 PANTHER PTHR11615:SF106 303 335 4.3E-103 T 23-04-2016 CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 PANTHER PTHR11615:SF106 1 243 4.3E-103 T 23-04-2016 CLI_RS08925 8c0d14ad0c8207e2d83a2c7eaea1c4b5 574 PANTHER PTHR11615:SF106 357 544 4.3E-103 T 23-04-2016 CLI_RS02065 5a9ce96620bac4942c306062fa077cda 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 1 190 5.5E-81 T 23-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CLI_RS02065 5a9ce96620bac4942c306062fa077cda 192 PANTHER PTHR30335:SF0 1 192 5.0E-117 T 23-04-2016 CLI_RS02065 5a9ce96620bac4942c306062fa077cda 192 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 1 191 25.248 T 23-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CLI_RS02065 5a9ce96620bac4942c306062fa077cda 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 190 8.5E-62 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CLI_RS02065 5a9ce96620bac4942c306062fa077cda 192 PIRSF PIRSF006102 1 192 9.1E-57 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CLI_RS02065 5a9ce96620bac4942c306062fa077cda 192 PANTHER PTHR30335 1 192 5.0E-117 T 23-04-2016 CLI_RS16030 9fb36c4b109bf161c46c665bbaf46a51 349 Pfam PF04245 37-kD nucleoid-associated bacterial protein 13 341 6.9E-72 T 23-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CLI_RS07320 a1d74bdbe9597b46f8f469840643fe02 207 SUPERFAMILY SSF55811 26 195 1.35E-28 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLI_RS07320 a1d74bdbe9597b46f8f469840643fe02 207 Pfam PF00293 NUDIX domain 47 134 5.6E-13 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CLI_RS07320 a1d74bdbe9597b46f8f469840643fe02 207 ProSitePatterns PS00893 Nudix box signature. 63 84 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CLI_RS07320 a1d74bdbe9597b46f8f469840643fe02 207 Gene3D G3DSA:3.90.79.10 23 203 5.7E-33 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLI_RS07320 a1d74bdbe9597b46f8f469840643fe02 207 PANTHER PTHR12992 1 202 3.5E-41 T 23-04-2016 CLI_RS10280 7642b3f9face0294a958b03407ee5284 497 SUPERFAMILY SSF161070 5 477 1.96E-149 T 23-04-2016 CLI_RS10280 7642b3f9face0294a958b03407ee5284 497 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 29 43 - T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLI_RS10280 7642b3f9face0294a958b03407ee5284 497 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 2.6E-23 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLI_RS10280 7642b3f9face0294a958b03407ee5284 497 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 313 332 2.6E-23 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLI_RS10280 7642b3f9face0294a958b03407ee5284 497 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 390 410 2.6E-23 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLI_RS10280 7642b3f9face0294a958b03407ee5284 497 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 2.6E-23 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLI_RS10280 7642b3f9face0294a958b03407ee5284 497 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 86 112 2.6E-23 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLI_RS10280 7642b3f9face0294a958b03407ee5284 497 PANTHER PTHR11616 5 478 2.1E-183 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLI_RS10280 7642b3f9face0294a958b03407ee5284 497 PANTHER PTHR11616:SF11 5 478 2.1E-183 T 23-04-2016 CLI_RS10280 7642b3f9face0294a958b03407ee5284 497 Pfam PF00209 Sodium:neurotransmitter symporter family 125 477 1.3E-79 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLI_RS15605 8de5d3c9fa93c9eca2b4c25bb470b287 339 PANTHER PTHR11538 93 339 2.4E-109 T 23-04-2016 CLI_RS15605 8de5d3c9fa93c9eca2b4c25bb470b287 339 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 339 46.668 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CLI_RS15605 8de5d3c9fa93c9eca2b4c25bb470b287 339 SUPERFAMILY SSF46589 16 99 2.25E-19 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CLI_RS15605 8de5d3c9fa93c9eca2b4c25bb470b287 339 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 339 2.3E-104 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CLI_RS15605 8de5d3c9fa93c9eca2b4c25bb470b287 339 Gene3D G3DSA:3.30.930.10 10 339 5.3E-128 T 23-04-2016 CLI_RS15605 8de5d3c9fa93c9eca2b4c25bb470b287 339 Pfam PF01409 tRNA synthetases class II core domain (F) 93 339 4.1E-105 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CLI_RS15605 8de5d3c9fa93c9eca2b4c25bb470b287 339 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 86 2.3E-23 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CLI_RS15605 8de5d3c9fa93c9eca2b4c25bb470b287 339 SUPERFAMILY SSF55681 93 339 8.53E-80 T 23-04-2016 CLI_RS12090 d96080df4e8bef48e5b748f36d10d9de 349 Pfam PF04551 GcpE protein 6 348 4.5E-143 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CLI_RS12090 d96080df4e8bef48e5b748f36d10d9de 349 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3 346 1.3E-131 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CLI_RS12090 d96080df4e8bef48e5b748f36d10d9de 349 SUPERFAMILY SSF56014 261 346 5.23E-13 T 23-04-2016 CLI_RS12090 d96080df4e8bef48e5b748f36d10d9de 349 Gene3D G3DSA:3.20.20.70 32 127 1.7E-8 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS12090 d96080df4e8bef48e5b748f36d10d9de 349 PANTHER PTHR30454 1 349 6.1E-198 T 23-04-2016 CLI_RS12090 d96080df4e8bef48e5b748f36d10d9de 349 PIRSF PIRSF004640 1 349 1.9E-151 T 23-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CLI_RS12090 d96080df4e8bef48e5b748f36d10d9de 349 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 1 348 33.716 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CLI_RS12090 d96080df4e8bef48e5b748f36d10d9de 349 SUPERFAMILY SSF51717 11 211 7.85E-12 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 CLI_RS13300 c9fe3695bca079c0233e8763a6d6477c 139 Pfam PF12611 Protein of unknown function (DUF3766) 115 138 3.1E-13 T 23-04-2016 IPR013367 Flagellar, putative CLI_RS13300 c9fe3695bca079c0233e8763a6d6477c 139 TIGRFAM TIGR02530 flg_new: flagellar operon protein 34 139 1.1E-33 T 23-04-2016 IPR013367 Flagellar, putative CLI_RS15965 9b5e3a81d9ea30c6c450b4b60c187b5b 51 Gene3D G3DSA:1.10.720.10 14 49 1.1E-9 T 23-04-2016 CLI_RS15965 9b5e3a81d9ea30c6c450b4b60c187b5b 51 SUPERFAMILY SSF68912 13 49 3.61E-8 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CLI_RS15965 9b5e3a81d9ea30c6c450b4b60c187b5b 51 Pfam PF07498 Rho termination factor, N-terminal domain 15 49 6.5E-12 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CLI_RS15965 9b5e3a81d9ea30c6c450b4b60c187b5b 51 SMART SM00959 15 50 0.0012 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CLI_RS06405 9c3131dbf17b42b9d4a163cf76387a6a 63 Pfam PF08141 Small acid-soluble spore protein H family 1 57 1.7E-19 T 23-04-2016 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLI_RS06405 9c3131dbf17b42b9d4a163cf76387a6a 63 Hamap MF_00667 Small, acid-soluble spore protein H [sspH]. 1 58 15.309 T 23-04-2016 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLI_RS06405 9c3131dbf17b42b9d4a163cf76387a6a 63 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 1 57 0.005 T 23-04-2016 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLI_RS06405 9c3131dbf17b42b9d4a163cf76387a6a 63 TIGRFAM TIGR02861 SASP_H: small acid-soluble spore protein, H-type 1 57 3.1E-26 T 23-04-2016 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLI_RS16130 a5a5635a46ca14d7a1713f940fc3838f 263 PANTHER PTHR30024 1 248 5.5E-112 T 23-04-2016 CLI_RS16130 a5a5635a46ca14d7a1713f940fc3838f 263 SUPERFAMILY SSF53850 1 184 4.0E-29 T 23-04-2016 CLI_RS16130 a5a5635a46ca14d7a1713f940fc3838f 263 Gene3D G3DSA:3.40.190.10 59 172 1.1E-10 T 23-04-2016 CLI_RS16130 a5a5635a46ca14d7a1713f940fc3838f 263 PANTHER PTHR30024:SF8 1 248 5.5E-112 T 23-04-2016 CLI_RS16130 a5a5635a46ca14d7a1713f940fc3838f 263 Pfam PF13379 NMT1-like family 60 188 1.2E-17 T 23-04-2016 CLI_RS07220 ca8bfbb493563c7f161f7da59621ad77 67 PIRSF PIRSF002599 1 67 8.4E-24 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 CLI_RS07220 ca8bfbb493563c7f161f7da59621ad77 67 PANTHER PTHR11544 1 67 1.4E-37 T 23-04-2016 CLI_RS07220 ca8bfbb493563c7f161f7da59621ad77 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 23-04-2016 IPR019844 Cold-shock conserved site CLI_RS07220 ca8bfbb493563c7f161f7da59621ad77 67 SUPERFAMILY SSF50249 1 66 1.51E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS07220 ca8bfbb493563c7f161f7da59621ad77 67 PRINTS PR00050 Cold shock protein signature 24 33 2.1E-19 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLI_RS07220 ca8bfbb493563c7f161f7da59621ad77 67 PRINTS PR00050 Cold shock protein signature 4 19 2.1E-19 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLI_RS07220 ca8bfbb493563c7f161f7da59621ad77 67 PRINTS PR00050 Cold shock protein signature 40 58 2.1E-19 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLI_RS07220 ca8bfbb493563c7f161f7da59621ad77 67 SMART SM00357 3 67 8.4E-30 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CLI_RS07220 ca8bfbb493563c7f161f7da59621ad77 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.6E-28 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLI_RS07220 ca8bfbb493563c7f161f7da59621ad77 67 Gene3D G3DSA:2.40.50.140 1 66 1.5E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS03400 5a271f0fa6cc3f4321c933e043d35312 137 PIRSF PIRSF016789 20 137 2.3E-30 T 23-04-2016 IPR007401 Protein of unknown function DUF454 CLI_RS03400 5a271f0fa6cc3f4321c933e043d35312 137 PANTHER PTHR35813:SF1 8 137 1.0E-49 T 23-04-2016 CLI_RS03400 5a271f0fa6cc3f4321c933e043d35312 137 PANTHER PTHR35813 8 137 1.0E-49 T 23-04-2016 CLI_RS03400 5a271f0fa6cc3f4321c933e043d35312 137 Pfam PF04304 Protein of unknown function (DUF454) 21 136 1.0E-35 T 23-04-2016 IPR007401 Protein of unknown function DUF454 CLI_RS18695 bed90c5061b50f7c6d43a212c8f99167 461 PANTHER PTHR10617:SF110 1 322 2.4E-158 T 23-04-2016 CLI_RS18695 bed90c5061b50f7c6d43a212c8f99167 461 PANTHER PTHR10617:SF110 400 458 2.4E-158 T 23-04-2016 CLI_RS18695 bed90c5061b50f7c6d43a212c8f99167 461 Pfam PF03486 HI0933-like protein 4 50 4.3E-5 T 23-04-2016 CLI_RS18695 bed90c5061b50f7c6d43a212c8f99167 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 411 433 4.2E-5 T 23-04-2016 CLI_RS18695 bed90c5061b50f7c6d43a212c8f99167 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.2E-5 T 23-04-2016 CLI_RS18695 bed90c5061b50f7c6d43a212c8f99167 461 Gene3D G3DSA:3.50.50.60 126 278 2.8E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS18695 bed90c5061b50f7c6d43a212c8f99167 461 Gene3D G3DSA:3.50.50.60 1 93 2.8E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS18695 bed90c5061b50f7c6d43a212c8f99167 461 Gene3D G3DSA:3.50.50.60 391 455 2.0E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS18695 bed90c5061b50f7c6d43a212c8f99167 461 PANTHER PTHR10617 1 322 2.4E-158 T 23-04-2016 CLI_RS18695 bed90c5061b50f7c6d43a212c8f99167 461 PANTHER PTHR10617 400 458 2.4E-158 T 23-04-2016 CLI_RS18695 bed90c5061b50f7c6d43a212c8f99167 461 SUPERFAMILY SSF51905 2 238 3.43E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS18695 bed90c5061b50f7c6d43a212c8f99167 461 SUPERFAMILY SSF51905 410 457 3.43E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 Pfam PF01316 Arginine repressor, DNA binding domain 2 67 1.1E-23 T 23-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 91 140 5.0E-12 T 23-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 PANTHER PTHR34471 1 148 2.6E-58 T 23-04-2016 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 Pfam PF02863 Arginine repressor, C-terminal domain 79 145 9.2E-23 T 23-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 SUPERFAMILY SSF55252 79 146 2.22E-16 T 23-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 Hamap MF_00173 Arginine repressor [argR]. 1 150 56.926 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 PANTHER PTHR34471:SF1 1 148 2.6E-58 T 23-04-2016 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 TIGRFAM TIGR01529 argR_whole: arginine repressor 4 147 8.3E-42 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 SUPERFAMILY SSF46785 2 74 1.85E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 Gene3D G3DSA:1.10.10.10 8 64 3.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 PRINTS PR01467 Bacterial arginine repressor signature 87 100 1.5E-20 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 PRINTS PR01467 Bacterial arginine repressor signature 20 33 1.5E-20 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 PRINTS PR01467 Bacterial arginine repressor signature 36 51 1.5E-20 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 PRINTS PR01467 Bacterial arginine repressor signature 117 132 1.5E-20 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 CLI_RS09500 86cbd62924dfd54839b52d599872882c 150 Gene3D G3DSA:3.30.1360.40 72 147 1.4E-23 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 Pfam PF01820 D-ala D-ala ligase N-terminus 2 84 2.8E-24 T 23-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 PIRSF PIRSF039102 42 300 2.5E-91 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 PANTHER PTHR23132 1 297 4.6E-86 T 23-04-2016 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 296 35.096 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 2 294 1.7E-91 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 SMART SM01209 93 263 0.0034 T 23-04-2016 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 Gene3D G3DSA:3.30.1490.20 94 171 6.9E-23 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 SUPERFAMILY SSF52440 1 94 4.6E-29 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 239 266 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 61 72 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 Pfam PF07478 D-ala D-ala ligase C-terminus 102 292 1.9E-48 T 23-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 SUPERFAMILY SSF56059 94 292 4.38E-48 T 23-04-2016 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 Gene3D G3DSA:3.30.470.20 83 93 5.9E-44 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 Gene3D G3DSA:3.30.470.20 172 294 5.9E-44 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 PANTHER PTHR23132:SF0 1 297 4.6E-86 T 23-04-2016 CLI_RS02515 b2684e9a3cd9a0738d59a45c5b6f15ce 300 Gene3D G3DSA:3.40.50.20 1 81 2.8E-27 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CLI_RS10985 2925a56015124d721637cc8825b743b5 410 PANTHER PTHR30548:SF4 4 408 3.0E-276 T 23-04-2016 CLI_RS10985 2925a56015124d721637cc8825b743b5 410 PANTHER PTHR30548 4 408 3.0E-276 T 23-04-2016 CLI_RS10985 2925a56015124d721637cc8825b743b5 410 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 41 400 5.3E-72 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS06845 ded6a5f7c115c669c31280bc9f64bbc7 142 Pfam PF01230 HIT domain 18 109 7.7E-18 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CLI_RS06845 ded6a5f7c115c669c31280bc9f64bbc7 142 SUPERFAMILY SSF54197 6 116 9.43E-34 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CLI_RS06845 ded6a5f7c115c669c31280bc9f64bbc7 142 PRINTS PR00332 Histidine triad family signature 30 48 4.3E-6 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CLI_RS06845 ded6a5f7c115c669c31280bc9f64bbc7 142 PRINTS PR00332 Histidine triad family signature 95 105 4.3E-6 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CLI_RS06845 ded6a5f7c115c669c31280bc9f64bbc7 142 PRINTS PR00332 Histidine triad family signature 9 25 4.3E-6 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CLI_RS06845 ded6a5f7c115c669c31280bc9f64bbc7 142 PANTHER PTHR23089 1 142 3.0E-30 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CLI_RS06845 ded6a5f7c115c669c31280bc9f64bbc7 142 Gene3D G3DSA:3.30.428.10 3 111 2.0E-30 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CLI_RS03065 5de7133c1ad0475b1c0203da6bffbbfa 324 PANTHER PTHR35797:SF1 40 322 1.0E-45 T 23-04-2016 CLI_RS03065 5de7133c1ad0475b1c0203da6bffbbfa 324 Pfam PF02517 CAAX protease self-immunity 184 281 3.0E-13 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 CLI_RS03065 5de7133c1ad0475b1c0203da6bffbbfa 324 PANTHER PTHR35797 40 322 1.0E-45 T 23-04-2016 CLI_RS17095 75883153bfdeeae1e161de342ad81cf2 709 Pfam PF00580 UvrD/REP helicase N-terminal domain 341 530 9.2E-6 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CLI_RS17095 75883153bfdeeae1e161de342ad81cf2 709 PANTHER PTHR11070 425 708 1.5E-263 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS17095 75883153bfdeeae1e161de342ad81cf2 709 PANTHER PTHR11070 108 369 1.5E-263 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS17095 75883153bfdeeae1e161de342ad81cf2 709 Gene3D G3DSA:3.40.50.300 565 704 6.8E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17095 75883153bfdeeae1e161de342ad81cf2 709 Gene3D G3DSA:3.40.50.300 203 310 2.7E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17095 75883153bfdeeae1e161de342ad81cf2 709 Gene3D G3DSA:3.40.50.300 472 564 2.7E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17095 75883153bfdeeae1e161de342ad81cf2 709 SUPERFAMILY SSF52540 450 703 1.74E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17095 75883153bfdeeae1e161de342ad81cf2 709 SUPERFAMILY SSF52540 203 354 1.74E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17095 75883153bfdeeae1e161de342ad81cf2 709 Pfam PF13245 Part of AAA domain 219 291 6.6E-13 T 23-04-2016 CLI_RS17095 75883153bfdeeae1e161de342ad81cf2 709 PANTHER PTHR11070:SF18 425 708 1.5E-263 T 23-04-2016 CLI_RS17095 75883153bfdeeae1e161de342ad81cf2 709 PANTHER PTHR11070:SF18 108 369 1.5E-263 T 23-04-2016 CLI_RS18775 7acbe8a85be754a0db8daeab7db0d0ee 384 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 3 380 3.4E-150 T 23-04-2016 IPR010969 Cysteine desulfurase-related, unknown function CLI_RS18775 7acbe8a85be754a0db8daeab7db0d0ee 384 Pfam PF00266 Aminotransferase class-V 3 371 5.2E-83 T 23-04-2016 IPR000192 Aminotransferase class V domain CLI_RS18775 7acbe8a85be754a0db8daeab7db0d0ee 384 PANTHER PTHR11601 1 384 2.4E-198 T 23-04-2016 CLI_RS18775 7acbe8a85be754a0db8daeab7db0d0ee 384 PANTHER PTHR11601:SF43 1 384 2.4E-198 T 23-04-2016 CLI_RS18775 7acbe8a85be754a0db8daeab7db0d0ee 384 Gene3D G3DSA:3.40.640.10 15 258 3.1E-67 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS18775 7acbe8a85be754a0db8daeab7db0d0ee 384 SUPERFAMILY SSF53383 3 383 1.08E-90 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS18775 7acbe8a85be754a0db8daeab7db0d0ee 384 PIRSF PIRSF005572 1 384 1.5E-51 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CLI_RS18775 7acbe8a85be754a0db8daeab7db0d0ee 384 Gene3D G3DSA:3.90.1150.10 259 379 1.7E-16 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS14140 dce4a03ced359e259fa134c4efb4c578 399 Pfam PF00258 Flavodoxin 257 317 3.6E-6 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLI_RS14140 dce4a03ced359e259fa134c4efb4c578 399 SUPERFAMILY SSF56281 5 290 1.11E-45 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS14140 dce4a03ced359e259fa134c4efb4c578 399 Pfam PF00753 Metallo-beta-lactamase superfamily 35 171 2.3E-6 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS14140 dce4a03ced359e259fa134c4efb4c578 399 ProSitePatterns PS00201 Flavodoxin signature. 257 273 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLI_RS14140 dce4a03ced359e259fa134c4efb4c578 399 PANTHER PTHR32145:SF20 2 399 0.0 T 23-04-2016 CLI_RS14140 dce4a03ced359e259fa134c4efb4c578 399 Gene3D G3DSA:3.60.15.10 2 246 1.5E-83 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS14140 dce4a03ced359e259fa134c4efb4c578 399 SUPERFAMILY SSF52218 253 398 4.82E-22 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS14140 dce4a03ced359e259fa134c4efb4c578 399 SMART SM00849 35 227 5.2E-18 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS14140 dce4a03ced359e259fa134c4efb4c578 399 PANTHER PTHR32145 2 399 0.0 T 23-04-2016 CLI_RS14140 dce4a03ced359e259fa134c4efb4c578 399 Gene3D G3DSA:3.40.50.360 250 395 2.2E-37 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS14140 dce4a03ced359e259fa134c4efb4c578 399 PIRSF PIRSF005243 1 399 1.3E-119 T 23-04-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 SMART SM00283 391 667 8.9E-20 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 PANTHER PTHR32089:SF1 9 675 2.7E-172 T 23-04-2016 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 Gene3D G3DSA:3.30.450.20 169 294 8.0E-23 T 23-04-2016 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 Gene3D G3DSA:1.10.287.950 602 649 5.9E-42 T 23-04-2016 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 Gene3D G3DSA:1.10.287.950 352 422 6.0E-5 T 23-04-2016 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 Gene3D G3DSA:1.10.287.950 423 565 5.9E-42 T 23-04-2016 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 SUPERFAMILY SSF103190 48 186 3.14E-5 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 Gene3D G3DSA:3.30.450.20 97 168 2.1E-9 T 23-04-2016 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 Pfam PF02743 Cache domain 46 279 5.0E-20 T 23-04-2016 IPR033479 Double Cache domain 1 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 SUPERFAMILY SSF58104 404 673 7.98E-52 T 23-04-2016 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 SUPERFAMILY SSF58104 337 371 7.98E-52 T 23-04-2016 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 450 561 9.8E-28 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 Pfam PF00672 HAMP domain 298 362 3.5E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS02765 f1d1ed9cf2c0aad1be0b1f509c28db97 676 PANTHER PTHR32089 9 675 2.7E-172 T 23-04-2016 CLI_RS10025 bd55f315b53575879c2e6e3419500dfe 110 Gene3D G3DSA:1.20.1290.10 11 104 9.1E-32 T 23-04-2016 IPR029032 AhpD-like CLI_RS10025 bd55f315b53575879c2e6e3419500dfe 110 PANTHER PTHR33930 4 109 4.7E-61 T 23-04-2016 CLI_RS10025 bd55f315b53575879c2e6e3419500dfe 110 Pfam PF02627 Carboxymuconolactone decarboxylase family 21 99 7.0E-19 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CLI_RS10025 bd55f315b53575879c2e6e3419500dfe 110 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 38 88 5.4E-11 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CLI_RS10025 bd55f315b53575879c2e6e3419500dfe 110 TIGRFAM TIGR04169 perox_w_seleSAM: alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein 2 110 2.1E-63 T 23-04-2016 IPR026445 Alkylhydroperoxidase/carboxymuconolactone decarboxylase family CLI_RS10025 bd55f315b53575879c2e6e3419500dfe 110 SUPERFAMILY SSF69118 12 101 9.42E-26 T 23-04-2016 IPR029032 AhpD-like CLI_RS10025 bd55f315b53575879c2e6e3419500dfe 110 PANTHER PTHR33930:SF4 4 109 4.7E-61 T 23-04-2016 CLI_RS03395 80098bc16faafac199c548239469edc9 157 SUPERFAMILY SSF50475 4 156 3.18E-41 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS03395 80098bc16faafac199c548239469edc9 157 PANTHER PTHR34071 1 156 3.6E-49 T 23-04-2016 CLI_RS03395 80098bc16faafac199c548239469edc9 157 Gene3D G3DSA:2.30.110.10 3 155 6.8E-42 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS03395 80098bc16faafac199c548239469edc9 157 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 13 154 4.1E-21 T 23-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related CLI_RS08850 4611942de289bddb52c63f701f667374 426 PANTHER PTHR30501:SF2 1 426 5.6E-121 T 23-04-2016 CLI_RS08850 4611942de289bddb52c63f701f667374 426 PANTHER PTHR30501 1 426 5.6E-121 T 23-04-2016 CLI_RS08850 4611942de289bddb52c63f701f667374 426 Pfam PF03313 Serine dehydratase alpha chain 172 419 1.0E-47 T 23-04-2016 IPR005130 Serine dehydratase-like, alpha subunit CLI_RS08850 4611942de289bddb52c63f701f667374 426 PIRSF PIRSF006054 1 425 2.0E-123 T 23-04-2016 IPR021144 Uncharacterised protein family UPF0597 CLI_RS08850 4611942de289bddb52c63f701f667374 426 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 2 423 33.518 T 23-04-2016 IPR021144 Uncharacterised protein family UPF0597 CLI_RS09450 47a806c15a293434ceec05fa0243ddc9 226 Pfam PF00149 Calcineurin-like phosphoesterase 2 206 8.7E-8 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CLI_RS09450 47a806c15a293434ceec05fa0243ddc9 226 SUPERFAMILY SSF56300 2 210 7.59E-16 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS09450 47a806c15a293434ceec05fa0243ddc9 226 Gene3D G3DSA:3.60.21.10 2 159 7.1E-9 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS03130 04f39ad10b18f9c7877e0b2fccf12131 450 PANTHER PTHR11228 36 429 3.2E-124 T 23-04-2016 CLI_RS03130 04f39ad10b18f9c7877e0b2fccf12131 450 Pfam PF13353 4Fe-4S single cluster domain 100 218 2.2E-12 T 23-04-2016 CLI_RS03130 04f39ad10b18f9c7877e0b2fccf12131 450 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 333 414 1.7E-14 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CLI_RS03130 04f39ad10b18f9c7877e0b2fccf12131 450 Pfam PF04055 Radical SAM superfamily 97 262 2.6E-20 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS03130 04f39ad10b18f9c7877e0b2fccf12131 450 TIGRFAM TIGR04334 rSAM_Clo7bot: radical SAM/SPASM domain Clo7bot peptide maturase 2 439 5.0E-258 T 23-04-2016 IPR027622 Radical SAM/SPASM domain-containing Clo7bot peptide maturase CLI_RS03130 04f39ad10b18f9c7877e0b2fccf12131 450 Gene3D G3DSA:3.20.20.70 93 410 7.4E-45 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS03130 04f39ad10b18f9c7877e0b2fccf12131 450 SUPERFAMILY SSF102114 93 407 6.02E-45 T 23-04-2016 CLI_RS03130 04f39ad10b18f9c7877e0b2fccf12131 450 PANTHER PTHR11228:SF5 36 429 3.2E-124 T 23-04-2016 CLI_RS08835 459e0d7f7ced35aa4485faf127377b7c 294 PANTHER PTHR30514:SF3 1 266 8.3E-100 T 23-04-2016 CLI_RS08835 459e0d7f7ced35aa4485faf127377b7c 294 Gene3D G3DSA:1.10.10.10 4 83 8.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08835 459e0d7f7ced35aa4485faf127377b7c 294 SUPERFAMILY SSF53697 103 269 2.22E-29 T 23-04-2016 CLI_RS08835 459e0d7f7ced35aa4485faf127377b7c 294 Gene3D G3DSA:3.40.50.10490 112 272 9.8E-28 T 23-04-2016 CLI_RS08835 459e0d7f7ced35aa4485faf127377b7c 294 SUPERFAMILY SSF46689 7 83 2.69E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS08835 459e0d7f7ced35aa4485faf127377b7c 294 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 81 2.0E-14 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLI_RS08835 459e0d7f7ced35aa4485faf127377b7c 294 PANTHER PTHR30514 1 266 8.3E-100 T 23-04-2016 CLI_RS08835 459e0d7f7ced35aa4485faf127377b7c 294 Pfam PF01380 SIS domain 132 258 4.5E-28 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CLI_RS04430 5f90171b52cd140cd59ff016943b2fc2 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 4.0E-13 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS04430 5f90171b52cd140cd59ff016943b2fc2 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 4.0E-13 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS04430 5f90171b52cd140cd59ff016943b2fc2 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 214 228 4.0E-13 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS04430 5f90171b52cd140cd59ff016943b2fc2 270 PRINTS PR00412 Epoxide hydrolase signature 30 48 1.6E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 CLI_RS04430 5f90171b52cd140cd59ff016943b2fc2 270 PRINTS PR00412 Epoxide hydrolase signature 212 228 1.6E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 CLI_RS04430 5f90171b52cd140cd59ff016943b2fc2 270 PRINTS PR00412 Epoxide hydrolase signature 245 267 1.6E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 CLI_RS04430 5f90171b52cd140cd59ff016943b2fc2 270 PRINTS PR00412 Epoxide hydrolase signature 50 65 1.6E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 CLI_RS04430 5f90171b52cd140cd59ff016943b2fc2 270 Pfam PF00561 alpha/beta hydrolase fold 25 128 4.2E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS04430 5f90171b52cd140cd59ff016943b2fc2 270 Gene3D G3DSA:3.40.50.1820 4 270 5.2E-60 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS04430 5f90171b52cd140cd59ff016943b2fc2 270 PANTHER PTHR10992 4 270 2.3E-84 T 23-04-2016 CLI_RS04430 5f90171b52cd140cd59ff016943b2fc2 270 PANTHER PTHR10992:SF771 4 270 2.3E-84 T 23-04-2016 CLI_RS04430 5f90171b52cd140cd59ff016943b2fc2 270 SUPERFAMILY SSF53474 3 269 1.03E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS12005 a828e0add6466aa9dec7d9eee152e7bd 758 PANTHER PTHR22683 259 747 4.2E-220 T 23-04-2016 CLI_RS12005 a828e0add6466aa9dec7d9eee152e7bd 758 SUPERFAMILY SSF52540 365 653 9.74E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12005 a828e0add6466aa9dec7d9eee152e7bd 758 SMART SM00382 427 605 0.0041 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS12005 a828e0add6466aa9dec7d9eee152e7bd 758 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 40 176 3.4E-8 T 23-04-2016 IPR025199 DNA translocase FtsK, 4TM region CLI_RS12005 a828e0add6466aa9dec7d9eee152e7bd 758 SUPERFAMILY SSF46785 682 747 1.29E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12005 a828e0add6466aa9dec7d9eee152e7bd 758 Pfam PF01580 FtsK/SpoIIIE family 392 525 3.0E-45 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CLI_RS12005 a828e0add6466aa9dec7d9eee152e7bd 758 Pfam PF01580 FtsK/SpoIIIE family 529 583 2.1E-15 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CLI_RS12005 a828e0add6466aa9dec7d9eee152e7bd 758 PANTHER PTHR22683:SF41 259 747 4.2E-220 T 23-04-2016 CLI_RS12005 a828e0add6466aa9dec7d9eee152e7bd 758 SMART SM00843 681 746 2.3E-34 T 23-04-2016 IPR018541 FtsK gamma domain CLI_RS12005 a828e0add6466aa9dec7d9eee152e7bd 758 Pfam PF09397 Ftsk gamma domain 683 743 1.4E-27 T 23-04-2016 IPR018541 FtsK gamma domain CLI_RS12005 a828e0add6466aa9dec7d9eee152e7bd 758 Gene3D G3DSA:3.40.50.300 366 649 6.6E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 Gene3D G3DSA:4.10.480.10 210 288 4.0E-30 T 23-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 SUPERFAMILY SSF56770 33 289 7.98E-73 T 23-04-2016 CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 Gene3D G3DSA:3.40.50.700 33 208 1.6E-44 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 PIRSF PIRSF000310 3 290 9.7E-97 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 172 195 1.1E-29 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 215 233 1.1E-29 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 53 77 1.1E-29 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 144 168 1.1E-29 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 197 214 1.1E-29 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 PANTHER PTHR30013:SF7 2 290 4.9E-139 T 23-04-2016 CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 PANTHER PTHR30013 2 290 4.9E-139 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 45 192 9.6E-29 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 210 287 5.9E-31 T 23-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CLI_RS08980 de6d0bb172cc338ef9b26467e35b6d15 290 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 24 287 1.1E-67 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLI_RS17710 39c69c6a7a7bd7335e8f4455b4b7d351 123 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 4.3E-54 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17710 39c69c6a7a7bd7335e8f4455b4b7d351 123 PANTHER PTHR10871 1 122 7.1E-70 T 23-04-2016 CLI_RS17710 39c69c6a7a7bd7335e8f4455b4b7d351 123 Gene3D G3DSA:1.10.8.50 1 72 2.0E-31 T 23-04-2016 CLI_RS17710 39c69c6a7a7bd7335e8f4455b4b7d351 123 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS17710 39c69c6a7a7bd7335e8f4455b4b7d351 123 Pfam PF00416 Ribosomal protein S13/S18 3 109 8.9E-32 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17710 39c69c6a7a7bd7335e8f4455b4b7d351 123 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 28.613 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17710 39c69c6a7a7bd7335e8f4455b4b7d351 123 SUPERFAMILY SSF46946 2 121 1.96E-45 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CLI_RS17710 39c69c6a7a7bd7335e8f4455b4b7d351 123 PIRSF PIRSF002134 1 123 1.2E-43 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17710 39c69c6a7a7bd7335e8f4455b4b7d351 123 Gene3D G3DSA:4.10.910.10 73 122 2.0E-25 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal CLI_RS13760 bde5a181059822419c4e7081d507ebb3 136 Pfam PF04138 GtrA-like protein 12 133 1.2E-10 T 23-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 SUPERFAMILY SSF54862 14 158 1.85E-24 T 23-04-2016 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 Gene3D G3DSA:3.80.30.10 136 314 4.1E-62 T 23-04-2016 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 PANTHER PTHR30352:SF4 114 314 1.1E-122 T 23-04-2016 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 PANTHER PTHR30352:SF4 1 67 1.1E-122 T 23-04-2016 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 PIRSF PIRSF000371 6 315 2.1E-99 T 23-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 ProSitePatterns PS01087 Radical activating enzymes signature. 26 47 - T 23-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 Gene3D G3DSA:3.30.70.20 39 119 3.2E-14 T 23-04-2016 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 SUPERFAMILY SSF102114 95 283 2.75E-19 T 23-04-2016 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 PANTHER PTHR30352 114 314 1.1E-122 T 23-04-2016 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 PANTHER PTHR30352 1 67 1.1E-122 T 23-04-2016 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 15 308 1.3E-118 T 23-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 TIGRFAM TIGR04395 cutC_activ_rSAM: choline TMA-lyase-activating enzyme 9 317 4.2E-173 T 23-04-2016 IPR030905 Choline TMA-lyase-activating enzyme UniPathway: UPA00117 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 Pfam PF04055 Radical SAM superfamily 33 253 4.9E-27 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 Pfam PF13353 4Fe-4S single cluster domain 25 63 1.4E-5 T 23-04-2016 CLI_RS10575 9707226d8bdaf9ca5471da72656b369a 317 Pfam PF13187 4Fe-4S dicluster domain 64 111 1.1E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS09430 f01f518abb30ef329f35c31a2dca6f6f 109 SUPERFAMILY SSF46785 59 96 3.49E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09430 f01f518abb30ef329f35c31a2dca6f6f 109 Gene3D G3DSA:1.10.10.10 23 86 3.4E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17795 65f696882a654cc6ba5f653317482e8b 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 82 25.594 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17795 65f696882a654cc6ba5f653317482e8b 84 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 2.3E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17795 65f696882a654cc6ba5f653317482e8b 84 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 2.3E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17795 65f696882a654cc6ba5f653317482e8b 84 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 2.3E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17795 65f696882a654cc6ba5f653317482e8b 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 77 3.0E-30 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17795 65f696882a654cc6ba5f653317482e8b 84 Gene3D G3DSA:2.40.50.140 6 83 5.4E-35 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17795 65f696882a654cc6ba5f653317482e8b 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 1.3E-36 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17795 65f696882a654cc6ba5f653317482e8b 84 Pfam PF00366 Ribosomal protein S17 11 78 3.3E-33 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17795 65f696882a654cc6ba5f653317482e8b 84 PANTHER PTHR10744 5 83 1.2E-40 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17795 65f696882a654cc6ba5f653317482e8b 84 SUPERFAMILY SSF50249 5 83 7.71E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS14970 d27b8e0f8c4f81918dd82dc06362b1dd 145 PIRSF PIRSF025624 1 145 3.5E-58 T 23-04-2016 IPR008310 UPF0735 ACT domain-containing protein GO:0009094 CLI_RS14970 d27b8e0f8c4f81918dd82dc06362b1dd 145 Hamap MF_00707 UPF0735 ACT domain-containing protein . 1 145 32.006 T 23-04-2016 IPR008310 UPF0735 ACT domain-containing protein GO:0009094 CLI_RS14970 d27b8e0f8c4f81918dd82dc06362b1dd 145 Gene3D G3DSA:3.30.70.260 68 139 3.5E-7 T 23-04-2016 CLI_RS14970 d27b8e0f8c4f81918dd82dc06362b1dd 145 SUPERFAMILY SSF55021 68 140 5.35E-9 T 23-04-2016 CLI_RS00800 e7fa0010152a264de92d9ace1bfc6180 533 SUPERFAMILY SSF52540 3 271 3.64E-127 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00800 e7fa0010152a264de92d9ace1bfc6180 533 TIGRFAM TIGR00337 PyrG: CTP synthase 2 528 2.9E-263 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CLI_RS00800 e7fa0010152a264de92d9ace1bfc6180 533 PANTHER PTHR11550 1 528 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CLI_RS00800 e7fa0010152a264de92d9ace1bfc6180 533 Pfam PF00117 Glutamine amidotransferase class-I 303 528 4.3E-63 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CLI_RS00800 e7fa0010152a264de92d9ace1bfc6180 533 SUPERFAMILY SSF52317 291 531 6.42E-87 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS00800 e7fa0010152a264de92d9ace1bfc6180 533 Hamap MF_01227 CTP synthase [pyrG]. 3 533 53.085 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CLI_RS00800 e7fa0010152a264de92d9ace1bfc6180 533 Gene3D G3DSA:3.40.50.880 290 532 1.4E-107 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS00800 e7fa0010152a264de92d9ace1bfc6180 533 Gene3D G3DSA:3.40.50.300 1 286 6.2E-142 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00800 e7fa0010152a264de92d9ace1bfc6180 533 Pfam PF06418 CTP synthase N-terminus 4 268 1.2E-132 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CLI_RS17895 24aa586355096b4616c150807e00f803 229 ProSitePatterns PS01199 Ribosomal protein L1 signature. 118 137 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site CLI_RS17895 24aa586355096b4616c150807e00f803 229 PIRSF PIRSF002155 1 224 3.3E-82 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 CLI_RS17895 24aa586355096b4616c150807e00f803 229 Gene3D G3DSA:3.30.190.20 14 65 1.1E-50 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CLI_RS17895 24aa586355096b4616c150807e00f803 229 Gene3D G3DSA:3.30.190.20 159 224 1.1E-50 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CLI_RS17895 24aa586355096b4616c150807e00f803 229 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 224 2.4E-106 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CLI_RS17895 24aa586355096b4616c150807e00f803 229 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 227 44.82 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CLI_RS17895 24aa586355096b4616c150807e00f803 229 PANTHER PTHR23105:SF5 16 229 2.3E-85 T 23-04-2016 CLI_RS17895 24aa586355096b4616c150807e00f803 229 Gene3D G3DSA:3.40.50.790 66 157 7.4E-43 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CLI_RS17895 24aa586355096b4616c150807e00f803 229 PANTHER PTHR23105 16 229 2.3E-85 T 23-04-2016 CLI_RS17895 24aa586355096b4616c150807e00f803 229 SUPERFAMILY SSF56808 3 224 5.62E-87 T 23-04-2016 IPR023674 Ribosomal protein L1-like CLI_RS17895 24aa586355096b4616c150807e00f803 229 Pfam PF00687 Ribosomal protein L1p/L10e family 28 218 1.5E-59 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CLI_RS01770 0972c88f9bfafb57b560263c16fc5f6e 276 PANTHER PTHR24220:SF438 5 264 3.0E-162 T 23-04-2016 CLI_RS01770 0972c88f9bfafb57b560263c16fc5f6e 276 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS01770 0972c88f9bfafb57b560263c16fc5f6e 276 Gene3D G3DSA:3.40.50.300 3 235 1.8E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01770 0972c88f9bfafb57b560263c16fc5f6e 276 Pfam PF00005 ABC transporter 20 167 2.0E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS01770 0972c88f9bfafb57b560263c16fc5f6e 276 PANTHER PTHR24220 5 264 3.0E-162 T 23-04-2016 CLI_RS01770 0972c88f9bfafb57b560263c16fc5f6e 276 SUPERFAMILY SSF52540 4 229 6.39E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01770 0972c88f9bfafb57b560263c16fc5f6e 276 SMART SM00382 28 217 2.9E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS00455 fd4a443b1ce84befb1f34f755846ac9a 203 PANTHER PTHR40056 1 203 5.2E-53 T 23-04-2016 CLI_RS00455 fd4a443b1ce84befb1f34f755846ac9a 203 Pfam PF08876 Domain of unknown function (DUF1836) 26 129 8.3E-25 T 23-04-2016 IPR014975 Protein of unknown function DUF1836 CLI_RS00455 fd4a443b1ce84befb1f34f755846ac9a 203 Gene3D G3DSA:1.10.238.10 98 191 8.2E-4 T 23-04-2016 IPR011992 EF-hand domain pair CLI_RS00455 fd4a443b1ce84befb1f34f755846ac9a 203 PANTHER PTHR40056:SF1 1 203 5.2E-53 T 23-04-2016 CLI_RS05535 fa4b8a10e018be607cdb7770ebb84e13 457 Gene3D G3DSA:3.30.565.10 318 447 1.2E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05535 fa4b8a10e018be607cdb7770ebb84e13 457 Pfam PF14501 GHKL domain 350 454 1.4E-24 T 23-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain CLI_RS05535 fa4b8a10e018be607cdb7770ebb84e13 457 SUPERFAMILY SSF55874 318 446 2.36E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05535 fa4b8a10e018be607cdb7770ebb84e13 457 PANTHER PTHR40448 2 457 2.9E-123 T 23-04-2016 CLI_RS05535 fa4b8a10e018be607cdb7770ebb84e13 457 PANTHER PTHR40448:SF1 2 457 2.9E-123 T 23-04-2016 CLI_RS02615 4efb00f4570e87ca4290cc59e3c1db77 182 PANTHER PTHR11839 4 164 4.1E-39 T 23-04-2016 CLI_RS02615 4efb00f4570e87ca4290cc59e3c1db77 182 Pfam PF00293 NUDIX domain 43 155 3.2E-7 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CLI_RS02615 4efb00f4570e87ca4290cc59e3c1db77 182 Gene3D G3DSA:3.90.79.10 2 166 1.5E-36 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLI_RS02615 4efb00f4570e87ca4290cc59e3c1db77 182 SUPERFAMILY SSF55811 2 162 2.84E-26 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 PANTHER PTHR11014:SF115 472 543 5.3E-235 T 23-04-2016 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 PANTHER PTHR11014:SF115 2 97 5.3E-235 T 23-04-2016 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 PANTHER PTHR11014:SF115 309 382 5.3E-235 T 23-04-2016 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 PANTHER PTHR11014:SF115 124 284 5.3E-235 T 23-04-2016 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 PANTHER PTHR11014:SF115 415 442 5.3E-235 T 23-04-2016 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 PIRSF PIRSF010386 1 543 3.2E-177 T 23-04-2016 IPR012166 Uncharacterised protein family RocB CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 SUPERFAMILY SSF53187 4 228 3.93E-28 T 23-04-2016 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 SUPERFAMILY SSF53187 461 540 3.93E-28 T 23-04-2016 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 PANTHER PTHR11014 472 543 5.3E-235 T 23-04-2016 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 PANTHER PTHR11014 2 97 5.3E-235 T 23-04-2016 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 PANTHER PTHR11014 309 382 5.3E-235 T 23-04-2016 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 PANTHER PTHR11014 124 284 5.3E-235 T 23-04-2016 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 PANTHER PTHR11014 415 442 5.3E-235 T 23-04-2016 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 Pfam PF01546 Peptidase family M20/M25/M40 120 417 2.2E-13 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLI_RS14480 682e20d6c9d61bba56f793c6369bc674 543 Gene3D G3DSA:3.40.630.10 3 316 1.3E-38 T 23-04-2016 CLI_RS14940 c657166eb36454d9dc5b417f614dc672 228 TIGRFAM TIGR00608 radc: DNA repair protein RadC 15 228 7.6E-74 T 23-04-2016 IPR001405 RadC protein CLI_RS14940 c657166eb36454d9dc5b417f614dc672 228 Gene3D G3DSA:3.40.140.10 105 227 1.1E-45 T 23-04-2016 CLI_RS14940 c657166eb36454d9dc5b417f614dc672 228 PANTHER PTHR30471:SF3 2 228 1.1E-119 T 23-04-2016 CLI_RS14940 c657166eb36454d9dc5b417f614dc672 228 PANTHER PTHR30471 2 228 1.1E-119 T 23-04-2016 CLI_RS14940 c657166eb36454d9dc5b417f614dc672 228 Gene3D G3DSA:1.10.150.20 53 88 1.5E-5 T 23-04-2016 CLI_RS14940 c657166eb36454d9dc5b417f614dc672 228 Pfam PF04002 RadC-like JAB domain 107 226 2.6E-44 T 23-04-2016 IPR025657 RadC-like JAB domain CLI_RS14940 c657166eb36454d9dc5b417f614dc672 228 SUPERFAMILY SSF102712 160 196 6.41E-5 T 23-04-2016 CLI_RS14940 c657166eb36454d9dc5b417f614dc672 228 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 177 182 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site CLI_RS14940 c657166eb36454d9dc5b417f614dc672 228 SUPERFAMILY SSF47781 20 92 5.19E-8 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CLI_RS13890 71af8281c16143cf27839f61e9237948 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 2.1E-68 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLI_RS13890 71af8281c16143cf27839f61e9237948 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 2.1E-68 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLI_RS13890 71af8281c16143cf27839f61e9237948 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 15 32 2.1E-68 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLI_RS13890 71af8281c16143cf27839f61e9237948 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 156 178 2.1E-68 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLI_RS13890 71af8281c16143cf27839f61e9237948 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 2.1E-68 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLI_RS13890 71af8281c16143cf27839f61e9237948 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 80 99 2.1E-68 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLI_RS13890 71af8281c16143cf27839f61e9237948 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 2.1E-68 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLI_RS13890 71af8281c16143cf27839f61e9237948 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 2.1E-68 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLI_RS13890 71af8281c16143cf27839f61e9237948 410 PANTHER PTHR34448:SF3 1 410 9.2E-256 T 23-04-2016 CLI_RS13890 71af8281c16143cf27839f61e9237948 410 PANTHER PTHR34448 1 410 9.2E-256 T 23-04-2016 CLI_RS13890 71af8281c16143cf27839f61e9237948 410 Pfam PF02073 Thermophilic metalloprotease (M29) 5 408 2.4E-181 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLI_RS13890 71af8281c16143cf27839f61e9237948 410 SUPERFAMILY SSF144052 4 409 1.7E-151 T 23-04-2016 CLI_RS04180 5e6c3bdda2036f7943ae60ca6e81695d 888 PANTHER PTHR30489:SF0 269 640 2.0E-284 T 23-04-2016 CLI_RS04180 5e6c3bdda2036f7943ae60ca6e81695d 888 PANTHER PTHR30489:SF0 1 180 2.0E-284 T 23-04-2016 CLI_RS04180 5e6c3bdda2036f7943ae60ca6e81695d 888 PANTHER PTHR30489:SF0 657 887 2.0E-284 T 23-04-2016 CLI_RS04180 5e6c3bdda2036f7943ae60ca6e81695d 888 PANTHER PTHR30489 269 640 2.0E-284 T 23-04-2016 CLI_RS04180 5e6c3bdda2036f7943ae60ca6e81695d 888 PANTHER PTHR30489 1 180 2.0E-284 T 23-04-2016 CLI_RS04180 5e6c3bdda2036f7943ae60ca6e81695d 888 PANTHER PTHR30489 657 887 2.0E-284 T 23-04-2016 CLI_RS04180 5e6c3bdda2036f7943ae60ca6e81695d 888 Pfam PF02687 FtsX-like permease family 764 879 1.4E-18 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS04180 5e6c3bdda2036f7943ae60ca6e81695d 888 Pfam PF02687 FtsX-like permease family 296 418 2.1E-19 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS10295 04ce1c522431ed934fcc53361d29ae92 166 Gene3D G3DSA:3.40.109.10 2 166 2.0E-53 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS10295 04ce1c522431ed934fcc53361d29ae92 166 PANTHER PTHR23026 1 166 3.7E-61 T 23-04-2016 CLI_RS10295 04ce1c522431ed934fcc53361d29ae92 166 PANTHER PTHR23026:SF103 1 166 3.7E-61 T 23-04-2016 CLI_RS10295 04ce1c522431ed934fcc53361d29ae92 166 SUPERFAMILY SSF55469 2 166 1.14E-49 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS10295 04ce1c522431ed934fcc53361d29ae92 166 Pfam PF00881 Nitroreductase family 4 58 1.4E-17 T 23-04-2016 IPR029479 Nitroreductase CLI_RS10295 04ce1c522431ed934fcc53361d29ae92 166 Pfam PF00881 Nitroreductase family 63 145 2.0E-9 T 23-04-2016 IPR029479 Nitroreductase CLI_RS01675 9e77dba85f6edbc8d0cf07b5375a3432 571 PANTHER PTHR21000 16 571 5.1E-265 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CLI_RS01675 9e77dba85f6edbc8d0cf07b5375a3432 571 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 469 480 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CLI_RS01675 9e77dba85f6edbc8d0cf07b5375a3432 571 SUPERFAMILY SSF143975 10 380 3.01E-120 T 23-04-2016 CLI_RS01675 9e77dba85f6edbc8d0cf07b5375a3432 571 Pfam PF00920 Dehydratase family 29 567 5.9E-182 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CLI_RS01675 9e77dba85f6edbc8d0cf07b5375a3432 571 PANTHER PTHR21000:SF11 16 571 5.1E-265 T 23-04-2016 CLI_RS01675 9e77dba85f6edbc8d0cf07b5375a3432 571 SUPERFAMILY SSF52016 382 570 3.14E-49 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLI_RS18550 e7cbf2221b6c914edc8e837e045b58dc 158 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 1.2E-39 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CLI_RS18550 e7cbf2221b6c914edc8e837e045b58dc 158 PANTHER PTHR23151 1 156 2.5E-36 T 23-04-2016 CLI_RS18550 e7cbf2221b6c914edc8e837e045b58dc 158 SUPERFAMILY SSF51230 79 155 3.66E-23 T 23-04-2016 IPR011053 Single hybrid motif CLI_RS18550 e7cbf2221b6c914edc8e837e045b58dc 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 3.51E-16 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CLI_RS18550 e7cbf2221b6c914edc8e837e045b58dc 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 3.51E-16 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CLI_RS18550 e7cbf2221b6c914edc8e837e045b58dc 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 3.51E-16 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CLI_RS18550 e7cbf2221b6c914edc8e837e045b58dc 158 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 23-04-2016 IPR001882 Biotin-binding site CLI_RS18550 e7cbf2221b6c914edc8e837e045b58dc 158 Gene3D G3DSA:2.40.50.100 79 156 3.3E-27 T 23-04-2016 CLI_RS18550 e7cbf2221b6c914edc8e837e045b58dc 158 Pfam PF00364 Biotin-requiring enzyme 82 155 1.2E-21 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CLI_RS18550 e7cbf2221b6c914edc8e837e045b58dc 158 PANTHER PTHR23151:SF64 1 156 2.5E-36 T 23-04-2016 CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 SMART SM00928 475 520 9.6E-23 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 SUPERFAMILY SSF142019 146 386 4.32E-92 T 23-04-2016 CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 Gene3D G3DSA:3.30.70.20 580 628 1.1E-12 T 23-04-2016 CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 38 116 1.1E-9 T 23-04-2016 CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 Pfam PF10531 SLBB domain 389 437 4.5E-8 T 23-04-2016 IPR019554 Soluble ligand binding domain CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 SUPERFAMILY SSF54862 579 629 3.01E-14 T 23-04-2016 CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 SUPERFAMILY SSF142984 387 470 4.05E-27 T 23-04-2016 CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 613 624 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 583 594 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 Pfam PF00037 4Fe-4S binding domain 607 628 4.9E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 SUPERFAMILY SSF140490 471 573 6.54E-38 T 23-04-2016 CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 Gene3D G3DSA:3.40.30.10 40 136 2.7E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 194 365 1.9E-47 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 PANTHER PTHR11780 40 599 0.0 T 23-04-2016 CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 476 560 4.7E-32 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 488 499 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 SUPERFAMILY SSF52833 40 130 8.39E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS09065 e2f56994c74c0f92a9c3fcbf88c56c74 631 PANTHER PTHR11780:SF0 40 599 0.0 T 23-04-2016 CLI_RS01245 de71bac9a63b8aa249be9efa7e87e8c7 335 PANTHER PTHR37822:SF2 1 335 2.6E-135 T 23-04-2016 CLI_RS01245 de71bac9a63b8aa249be9efa7e87e8c7 335 Gene3D G3DSA:3.80.30.20 241 271 3.1E-4 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS01245 de71bac9a63b8aa249be9efa7e87e8c7 335 Gene3D G3DSA:3.80.30.20 84 176 3.1E-4 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS01245 de71bac9a63b8aa249be9efa7e87e8c7 335 PANTHER PTHR37822 1 335 2.6E-135 T 23-04-2016 CLI_RS01245 de71bac9a63b8aa249be9efa7e87e8c7 335 SUPERFAMILY SSF102114 81 248 3.66E-5 T 23-04-2016 CLI_RS01245 de71bac9a63b8aa249be9efa7e87e8c7 335 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 2 335 1.2E-163 T 23-04-2016 IPR023897 Spore photoproduct lyase GO:0003913 CLI_RS10090 2cdca6b79b5f56c610625bb6c0d71616 245 Pfam PF01380 SIS domain 112 212 3.0E-16 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CLI_RS10090 2cdca6b79b5f56c610625bb6c0d71616 245 SUPERFAMILY SSF46689 3 70 1.25E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS10090 2cdca6b79b5f56c610625bb6c0d71616 245 PANTHER PTHR30514:SF3 2 242 7.6E-71 T 23-04-2016 CLI_RS10090 2cdca6b79b5f56c610625bb6c0d71616 245 SUPERFAMILY SSF53697 82 243 1.22E-24 T 23-04-2016 CLI_RS10090 2cdca6b79b5f56c610625bb6c0d71616 245 PANTHER PTHR30514 2 242 7.6E-71 T 23-04-2016 CLI_RS10090 2cdca6b79b5f56c610625bb6c0d71616 245 Gene3D G3DSA:1.10.10.10 7 61 2.7E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10090 2cdca6b79b5f56c610625bb6c0d71616 245 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 70 8.2E-12 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLI_RS10090 2cdca6b79b5f56c610625bb6c0d71616 245 Gene3D G3DSA:3.40.50.10490 62 225 4.5E-25 T 23-04-2016 CLI_RS11675 e08cf8c6f5dcc1aa5a3dd04888c7d721 255 SMART SM00287 194 251 0.0024 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS11675 e08cf8c6f5dcc1aa5a3dd04888c7d721 255 SUPERFAMILY SSF53187 3 172 6.28E-30 T 23-04-2016 CLI_RS11675 e08cf8c6f5dcc1aa5a3dd04888c7d721 255 PANTHER PTHR30404 7 207 1.2E-17 T 23-04-2016 CLI_RS11675 e08cf8c6f5dcc1aa5a3dd04888c7d721 255 Pfam PF08239 Bacterial SH3 domain 203 253 6.3E-11 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS11675 e08cf8c6f5dcc1aa5a3dd04888c7d721 255 Gene3D G3DSA:3.40.630.40 5 172 1.8E-24 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS11675 e08cf8c6f5dcc1aa5a3dd04888c7d721 255 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 5 170 3.8E-23 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS11675 e08cf8c6f5dcc1aa5a3dd04888c7d721 255 SMART SM00646 67 171 2.2E-12 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS01705 490ce556d0ea00239004982bdd31e3db 322 Gene3D G3DSA:3.90.550.10 7 138 9.3E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS01705 490ce556d0ea00239004982bdd31e3db 322 PANTHER PTHR10859:SF86 3 321 1.7E-170 T 23-04-2016 CLI_RS01705 490ce556d0ea00239004982bdd31e3db 322 SUPERFAMILY SSF53448 6 196 2.57E-33 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS01705 490ce556d0ea00239004982bdd31e3db 322 Pfam PF00535 Glycosyl transferase family 2 8 170 2.5E-35 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CLI_RS01705 490ce556d0ea00239004982bdd31e3db 322 PANTHER PTHR10859 3 321 1.7E-170 T 23-04-2016 CLI_RS10220 7ed5a5241f1ba5e33237aeb5e9d2a754 221 Pfam PF00302 Chloramphenicol acetyltransferase 1 208 3.5E-82 T 23-04-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CLI_RS10220 7ed5a5241f1ba5e33237aeb5e9d2a754 221 PANTHER PTHR38474 4 221 2.2E-128 T 23-04-2016 CLI_RS10220 7ed5a5241f1ba5e33237aeb5e9d2a754 221 PANTHER PTHR38474:SF2 4 221 2.2E-128 T 23-04-2016 CLI_RS10220 7ed5a5241f1ba5e33237aeb5e9d2a754 221 SUPERFAMILY SSF52777 1 213 3.5E-69 T 23-04-2016 CLI_RS10220 7ed5a5241f1ba5e33237aeb5e9d2a754 221 PIRSF PIRSF000440 1 217 4.6E-77 T 23-04-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CLI_RS10220 7ed5a5241f1ba5e33237aeb5e9d2a754 221 SMART SM01059 1 208 6.0E-115 T 23-04-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CLI_RS10220 7ed5a5241f1ba5e33237aeb5e9d2a754 221 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 9 206 6.0E-69 T 23-04-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CLI_RS10220 7ed5a5241f1ba5e33237aeb5e9d2a754 221 Gene3D G3DSA:3.30.559.10 1 210 8.2E-84 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain CLI_RS10775 51f2afd60b30533980aba46d8ecaef4a 145 Gene3D G3DSA:3.40.930.10 1 145 1.6E-51 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS10775 51f2afd60b30533980aba46d8ecaef4a 145 PANTHER PTHR30505 1 145 1.1E-93 T 23-04-2016 CLI_RS10775 51f2afd60b30533980aba46d8ecaef4a 145 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 7.0E-37 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS10775 51f2afd60b30533980aba46d8ecaef4a 145 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS10775 51f2afd60b30533980aba46d8ecaef4a 145 PANTHER PTHR30505:SF10 1 145 1.1E-93 T 23-04-2016 CLI_RS10775 51f2afd60b30533980aba46d8ecaef4a 145 SUPERFAMILY SSF55804 1 145 1.26E-39 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 CLI_RS01595 74c4a0b5a42ad628726cb57492563cbc 656 PANTHER PTHR30489 1 643 1.4E-115 T 23-04-2016 CLI_RS01595 74c4a0b5a42ad628726cb57492563cbc 656 Pfam PF02687 FtsX-like permease family 67 183 3.4E-10 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS01595 74c4a0b5a42ad628726cb57492563cbc 656 PANTHER PTHR30489:SF14 1 643 1.4E-115 T 23-04-2016 CLI_RS01595 74c4a0b5a42ad628726cb57492563cbc 656 PIRSF PIRSF018968 1 655 7.4E-105 T 23-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 CLI_RS00860 057fca8b3706a81ed0a5151b0056b170 145 PANTHER PTHR30345 1 145 2.3E-82 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CLI_RS00860 057fca8b3706a81ed0a5151b0056b170 145 PIRSF PIRSF005384 1 145 1.4E-61 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CLI_RS00860 057fca8b3706a81ed0a5151b0056b170 145 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 143 5.6E-61 T 23-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 CLI_RS00860 057fca8b3706a81ed0a5151b0056b170 145 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 2.2E-61 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CLI_RS00860 057fca8b3706a81ed0a5151b0056b170 145 Pfam PF02502 Ribose/Galactose Isomerase 3 140 7.2E-62 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CLI_RS00860 057fca8b3706a81ed0a5151b0056b170 145 SUPERFAMILY SSF89623 1 144 2.22E-62 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CLI_RS00860 057fca8b3706a81ed0a5151b0056b170 145 Gene3D G3DSA:3.40.1400.10 1 144 1.3E-68 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 PANTHER PTHR11493 3 162 3.1E-160 T 23-04-2016 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 PANTHER PTHR11493 220 320 3.1E-160 T 23-04-2016 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 204 215 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 143 159 - T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 TIGRFAM TIGR02912 sulfite_red_C: sulfite reductase, subunit C 2 315 9.6E-186 T 23-04-2016 IPR014261 Sulphite reductase, subunit C UniPathway: UPA00370 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 Gene3D G3DSA:3.30.413.10 226 298 5.2E-36 T 23-04-2016 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 Gene3D G3DSA:3.30.413.10 101 155 5.2E-36 T 23-04-2016 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 98 300 1.1E-28 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 PANTHER PTHR11493:SF49 3 162 3.1E-160 T 23-04-2016 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 PANTHER PTHR11493:SF49 220 320 3.1E-160 T 23-04-2016 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 20 79 2.0E-15 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 Gene3D G3DSA:3.30.70.20 177 225 1.3E-13 T 23-04-2016 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 Pfam PF13187 4Fe-4S dicluster domain 171 218 3.5E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 Gene3D G3DSA:3.30.70.20 156 176 3.3E-4 T 23-04-2016 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 PRINTS PR00397 Sirohaem Fe-binding site signature 143 161 1.1E-6 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 PRINTS PR00397 Sirohaem Fe-binding site signature 102 120 1.1E-6 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 SUPERFAMILY SSF54862 145 225 7.73E-18 T 23-04-2016 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 SUPERFAMILY SSF55124 5 80 1.31E-16 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 SUPERFAMILY SSF56014 101 165 2.43E-34 T 23-04-2016 CLI_RS05070 4ad5882ab987d80136b49253a406ff4f 321 SUPERFAMILY SSF56014 225 305 2.43E-34 T 23-04-2016 CLI_RS08670 bf2cc426493addd0c0e6d1a0b32953d6 421 SMART SM00487 22 221 4.2E-49 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS08670 bf2cc426493addd0c0e6d1a0b32953d6 421 SMART SM00490 257 338 9.3E-26 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS08670 bf2cc426493addd0c0e6d1a0b32953d6 421 Gene3D G3DSA:3.40.50.300 211 372 3.1E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08670 bf2cc426493addd0c0e6d1a0b32953d6 421 Pfam PF00270 DEAD/DEAH box helicase 27 191 2.9E-42 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLI_RS08670 bf2cc426493addd0c0e6d1a0b32953d6 421 PANTHER PTHR24031 3 368 7.9E-137 T 23-04-2016 CLI_RS08670 bf2cc426493addd0c0e6d1a0b32953d6 421 Gene3D G3DSA:3.40.50.300 3 210 6.9E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08670 bf2cc426493addd0c0e6d1a0b32953d6 421 Pfam PF00271 Helicase conserved C-terminal domain 230 337 8.0E-26 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS08670 bf2cc426493addd0c0e6d1a0b32953d6 421 SUPERFAMILY SSF52540 71 359 6.43E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13210 a4abb3ee9c24296e151f260df3aae531 263 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 137 3.4E-43 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLI_RS13210 a4abb3ee9c24296e151f260df3aae531 263 SUPERFAMILY SSF117143 90 223 5.89E-22 T 23-04-2016 CLI_RS13210 a4abb3ee9c24296e151f260df3aae531 263 Pfam PF00460 Flagella basal body rod protein 5 35 3.3E-12 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLI_RS13210 a4abb3ee9c24296e151f260df3aae531 263 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 191 261 7.6E-19 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLI_RS13210 a4abb3ee9c24296e151f260df3aae531 263 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CLI_RS13210 a4abb3ee9c24296e151f260df3aae531 263 PANTHER PTHR30435:SF19 1 263 8.4E-103 T 23-04-2016 CLI_RS13210 a4abb3ee9c24296e151f260df3aae531 263 PANTHER PTHR30435 1 263 8.4E-103 T 23-04-2016 CLI_RS08840 a920367e0a1dd0c77f1861046a6ba718 236 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLI_RS08840 a920367e0a1dd0c77f1861046a6ba718 236 Pfam PF00849 RNA pseudouridylate synthase 65 195 1.6E-18 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS08840 a920367e0a1dd0c77f1861046a6ba718 236 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 227 1.8E-49 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLI_RS08840 a920367e0a1dd0c77f1861046a6ba718 236 SMART SM00363 3 62 2.1E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS08840 a920367e0a1dd0c77f1861046a6ba718 236 Pfam PF01479 S4 domain 3 43 6.3E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS08840 a920367e0a1dd0c77f1861046a6ba718 236 SUPERFAMILY SSF55120 61 231 2.7E-45 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS08840 a920367e0a1dd0c77f1861046a6ba718 236 SUPERFAMILY SSF55174 1 91 7.74E-17 T 23-04-2016 CLI_RS08840 a920367e0a1dd0c77f1861046a6ba718 236 PANTHER PTHR21600:SF2 1 236 3.8E-81 T 23-04-2016 CLI_RS08840 a920367e0a1dd0c77f1861046a6ba718 236 PANTHER PTHR21600 1 236 3.8E-81 T 23-04-2016 CLI_RS08840 a920367e0a1dd0c77f1861046a6ba718 236 Gene3D G3DSA:3.10.290.10 2 66 1.8E-20 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS13680 2f2db1e5fe5d7089466cdbf1aeba4a1a 148 SUPERFAMILY SSF50341 3 146 1.57E-34 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLI_RS13680 2f2db1e5fe5d7089466cdbf1aeba4a1a 148 PANTHER PTHR22617 1 148 7.3E-39 T 23-04-2016 CLI_RS13680 2f2db1e5fe5d7089466cdbf1aeba4a1a 148 Gene3D G3DSA:2.40.50.180 46 91 2.0E-12 T 23-04-2016 CLI_RS13680 2f2db1e5fe5d7089466cdbf1aeba4a1a 148 Pfam PF01584 CheW-like domain 8 143 7.7E-33 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLI_RS13680 2f2db1e5fe5d7089466cdbf1aeba4a1a 148 SMART SM00260 3 140 1.7E-34 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLI_RS12260 ba6e4bd7f4addff7eff140eb15b6986d 335 PANTHER PTHR30100 1 335 4.4E-140 T 23-04-2016 CLI_RS12260 ba6e4bd7f4addff7eff140eb15b6986d 335 PIRSF PIRSF002465 1 334 1.9E-127 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 CLI_RS12260 ba6e4bd7f4addff7eff140eb15b6986d 335 PANTHER PTHR30100:SF1 1 335 4.4E-140 T 23-04-2016 CLI_RS12260 ba6e4bd7f4addff7eff140eb15b6986d 335 SUPERFAMILY SSF53659 1 332 9.05E-102 T 23-04-2016 CLI_RS12260 ba6e4bd7f4addff7eff140eb15b6986d 335 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 335 145.941 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 CLI_RS12260 ba6e4bd7f4addff7eff140eb15b6986d 335 Pfam PF02504 Fatty acid synthesis protein 1 319 2.0E-113 T 23-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 CLI_RS12260 ba6e4bd7f4addff7eff140eb15b6986d 335 Gene3D G3DSA:3.40.718.10 1 329 4.6E-134 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CLI_RS12260 ba6e4bd7f4addff7eff140eb15b6986d 335 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 2 332 4.9E-117 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 CLI_RS12495 2c26a735127e47b9437b5f47bdad90d9 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 17.774 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12495 2c26a735127e47b9437b5f47bdad90d9 63 Pfam PF00830 Ribosomal L28 family 3 58 3.9E-22 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 CLI_RS12495 2c26a735127e47b9437b5f47bdad90d9 63 Gene3D G3DSA:4.10.1160.10 19 63 2.8E-24 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12495 2c26a735127e47b9437b5f47bdad90d9 63 PANTHER PTHR39080 2 63 7.7E-13 T 23-04-2016 CLI_RS12495 2c26a735127e47b9437b5f47bdad90d9 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 2 56 5.1E-23 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12495 2c26a735127e47b9437b5f47bdad90d9 63 PANTHER PTHR39080:SF1 2 63 7.7E-13 T 23-04-2016 CLI_RS12495 2c26a735127e47b9437b5f47bdad90d9 63 SUPERFAMILY SSF143800 2 61 1.24E-23 T 23-04-2016 CLI_RS02405 03aa4d7693e29f7d6c9a28469c4a15da 223 Gene3D G3DSA:3.40.50.300 163 220 2.1E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02405 03aa4d7693e29f7d6c9a28469c4a15da 223 PIRSF PIRSF005624 2 223 1.3E-82 T 23-04-2016 CLI_RS02405 03aa4d7693e29f7d6c9a28469c4a15da 223 Gene3D G3DSA:3.40.50.300 42 123 2.6E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02405 03aa4d7693e29f7d6c9a28469c4a15da 223 SUPERFAMILY SSF52540 5 221 2.11E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02405 03aa4d7693e29f7d6c9a28469c4a15da 223 PANTHER PTHR30134 1 223 7.7E-122 T 23-04-2016 CLI_RS02405 03aa4d7693e29f7d6c9a28469c4a15da 223 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 6 217 2.2E-75 T 23-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 CLI_RS02405 03aa4d7693e29f7d6c9a28469c4a15da 223 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 36 196 4.7E-25 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLI_RS02405 03aa4d7693e29f7d6c9a28469c4a15da 223 PANTHER PTHR30134:SF2 1 223 7.7E-122 T 23-04-2016 CLI_RS07970 2fae5fecb3764929ac6fca5efee58d04 240 PANTHER PTHR36444:SF2 11 240 4.4E-124 T 23-04-2016 CLI_RS07970 2fae5fecb3764929ac6fca5efee58d04 240 Pfam PF12674 Putative zinc ribbon domain 5 83 4.7E-29 T 23-04-2016 IPR025868 Putative zinc ribbon domain CLI_RS07970 2fae5fecb3764929ac6fca5efee58d04 240 PANTHER PTHR36444 11 240 4.4E-124 T 23-04-2016 CLI_RS07970 2fae5fecb3764929ac6fca5efee58d04 240 SMART SM00871 87 240 1.2E-32 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding CLI_RS07970 2fae5fecb3764929ac6fca5efee58d04 240 Pfam PF14526 Integron-associated effector binding protein 91 239 6.0E-29 T 23-04-2016 IPR029441 Integron-associated effector binding protein CLI_RS07970 2fae5fecb3764929ac6fca5efee58d04 240 SUPERFAMILY SSF55136 90 240 3.66E-23 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS07970 2fae5fecb3764929ac6fca5efee58d04 240 Gene3D G3DSA:3.20.80.10 70 240 6.3E-54 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 Pfam PF00246 Zinc carboxypeptidase 136 415 2.6E-39 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 Gene3D G3DSA:3.10.350.10 74 118 8.4E-14 T 23-04-2016 IPR018392 LysM domain CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 PANTHER PTHR11705 130 394 1.2E-46 T 23-04-2016 CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 SUPERFAMILY SSF53187 123 418 4.89E-58 T 23-04-2016 CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 Pfam PF01476 LysM domain 75 118 3.3E-13 T 23-04-2016 IPR018392 LysM domain CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 PANTHER PTHR11705:SF56 130 394 1.2E-46 T 23-04-2016 CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 Gene3D G3DSA:1.10.101.10 2 67 1.7E-27 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 SUPERFAMILY SSF47090 2 66 5.23E-22 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 SMART SM00257 74 118 4.3E-15 T 23-04-2016 IPR018392 LysM domain CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 Pfam PF01471 Putative peptidoglycan binding domain 9 65 6.6E-19 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 SMART SM00631 129 412 2.1E-22 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 Gene3D G3DSA:3.40.630.10 125 418 1.0E-53 T 23-04-2016 CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 329 342 4.0E-5 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 154 166 4.0E-5 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 271 279 4.0E-5 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 173 187 4.0E-5 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CLI_RS07155 b4e06ae8f4854f1ab2960482951c17b3 423 SUPERFAMILY SSF54106 73 118 6.15E-10 T 23-04-2016 IPR018392 LysM domain CLI_RS13905 e41a897a429cc8179f534c1f775452da 495 PANTHER PTHR22550 32 494 1.1E-114 T 23-04-2016 CLI_RS13905 e41a897a429cc8179f534c1f775452da 495 PANTHER PTHR22550:SF7 32 494 1.1E-114 T 23-04-2016 CLI_RS13905 e41a897a429cc8179f534c1f775452da 495 PIRSF PIRSF005690 1 486 2.8E-152 T 23-04-2016 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLI_RS13905 e41a897a429cc8179f534c1f775452da 495 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 14 471 8.3E-147 T 23-04-2016 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLI_RS05830 ad34679373121b894d4ae9970189ec09 111 Pfam PF00085 Thioredoxin 4 83 5.4E-9 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 CLI_RS05830 ad34679373121b894d4ae9970189ec09 111 PANTHER PTHR10438:SF292 1 109 3.0E-51 T 23-04-2016 CLI_RS05830 ad34679373121b894d4ae9970189ec09 111 PANTHER PTHR10438 1 109 3.0E-51 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLI_RS05830 ad34679373121b894d4ae9970189ec09 111 Gene3D G3DSA:3.40.30.10 2 102 1.8E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS05830 ad34679373121b894d4ae9970189ec09 111 SUPERFAMILY SSF52833 8 103 1.39E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS00440 73e7ba530f18305d5caf419b1e536fbd 284 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 8 207 7.1E-32 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS00440 73e7ba530f18305d5caf419b1e536fbd 284 PANTHER PTHR21091:SF18 1 249 4.6E-93 T 23-04-2016 CLI_RS00440 73e7ba530f18305d5caf419b1e536fbd 284 PIRSF PIRSF005917 1 284 1.1E-103 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS00440 73e7ba530f18305d5caf419b1e536fbd 284 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 9 281 1.8E-83 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS00440 73e7ba530f18305d5caf419b1e536fbd 284 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 86 97 - T 23-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS00440 73e7ba530f18305d5caf419b1e536fbd 284 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 8 226 37.072 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLI_RS00440 73e7ba530f18305d5caf419b1e536fbd 284 Gene3D G3DSA:3.30.950.10 117 227 8.7E-41 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 CLI_RS00440 73e7ba530f18305d5caf419b1e536fbd 284 SUPERFAMILY SSF53790 7 224 1.57E-80 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS00440 73e7ba530f18305d5caf419b1e536fbd 284 Gene3D G3DSA:3.40.1010.10 7 116 6.5E-18 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CLI_RS00440 73e7ba530f18305d5caf419b1e536fbd 284 PANTHER PTHR21091 1 249 4.6E-93 T 23-04-2016 CLI_RS02535 41a1b748a68ebffd8db642cd379188a2 245 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 217 239 5.7E-9 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLI_RS02535 41a1b748a68ebffd8db642cd379188a2 245 PANTHER PTHR24220:SF358 5 240 6.9E-126 T 23-04-2016 CLI_RS02535 41a1b748a68ebffd8db642cd379188a2 245 PANTHER PTHR24220 5 240 6.9E-126 T 23-04-2016 CLI_RS02535 41a1b748a68ebffd8db642cd379188a2 245 Pfam PF00005 ABC transporter 20 167 5.9E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS02535 41a1b748a68ebffd8db642cd379188a2 245 SUPERFAMILY SSF52540 3 239 8.84E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02535 41a1b748a68ebffd8db642cd379188a2 245 Gene3D G3DSA:3.40.50.300 3 237 4.9E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02535 41a1b748a68ebffd8db642cd379188a2 245 SMART SM00382 28 216 2.8E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS05625 b977bd38cf41af082d82c33891b97a75 445 ProSitePatterns PS00942 glpT family of transporters signature. 150 166 - T 23-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 CLI_RS05625 b977bd38cf41af082d82c33891b97a75 445 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 412 1.1E-146 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CLI_RS05625 b977bd38cf41af082d82c33891b97a75 445 PIRSF PIRSF002808 6 444 4.0E-163 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CLI_RS05625 b977bd38cf41af082d82c33891b97a75 445 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 4 435 2.7E-199 T 23-04-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 CLI_RS05625 b977bd38cf41af082d82c33891b97a75 445 Gene3D G3DSA:1.20.1250.20 23 217 2.8E-51 T 23-04-2016 CLI_RS05625 b977bd38cf41af082d82c33891b97a75 445 Gene3D G3DSA:1.20.1250.20 235 437 3.1E-44 T 23-04-2016 CLI_RS05625 b977bd38cf41af082d82c33891b97a75 445 PANTHER PTHR11662 2 442 2.1E-232 T 23-04-2016 CLI_RS05625 b977bd38cf41af082d82c33891b97a75 445 PANTHER PTHR11662:SF141 2 442 2.1E-232 T 23-04-2016 CLI_RS05625 b977bd38cf41af082d82c33891b97a75 445 SUPERFAMILY SSF103473 10 436 3.14E-83 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS05625 b977bd38cf41af082d82c33891b97a75 445 Pfam PF07690 Major Facilitator Superfamily 36 391 6.9E-52 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 Gene3D G3DSA:3.30.1360.60 412 489 1.7E-23 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 428 445 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 568 580 - T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 SUPERFAMILY SSF51261 495 647 5.06E-51 T 23-04-2016 IPR011055 Duplicated hybrid motif CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 506 626 3.2E-45 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 Pfam PF00367 phosphotransferase system, EIIB 419 450 2.1E-13 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 PANTHER PTHR30009:SF4 5 499 8.3E-229 T 23-04-2016 CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 PANTHER PTHR30009 5 499 8.3E-229 T 23-04-2016 CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 SUPERFAMILY SSF55604 416 487 6.15E-18 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 395 474 1.6E-13 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 505 628 2.2E-48 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 Pfam PF02378 Phosphotransferase system, EIIC 12 331 1.1E-63 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS13690 864fc3d1cdbec9ae28f0d61109ecf480 651 Gene3D G3DSA:2.70.70.10 501 646 5.7E-55 T 23-04-2016 CLI_RS14475 462ae935c144a12060b178095e4ebfb6 353 Gene3D G3DSA:2.40.30.10 272 351 5.5E-25 T 23-04-2016 CLI_RS14475 462ae935c144a12060b178095e4ebfb6 353 PANTHER PTHR11933 1 350 7.7E-175 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CLI_RS14475 462ae935c144a12060b178095e4ebfb6 353 PANTHER PTHR11933:SF10 1 350 7.7E-175 T 23-04-2016 CLI_RS14475 462ae935c144a12060b178095e4ebfb6 353 Pfam PF03054 tRNA methyl transferase 5 349 5.5E-122 T 23-04-2016 CLI_RS14475 462ae935c144a12060b178095e4ebfb6 353 SUPERFAMILY SSF52402 2 241 5.95E-60 T 23-04-2016 CLI_RS14475 462ae935c144a12060b178095e4ebfb6 353 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 350 39.954 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CLI_RS14475 462ae935c144a12060b178095e4ebfb6 353 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 349 5.4E-111 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CLI_RS14475 462ae935c144a12060b178095e4ebfb6 353 Gene3D G3DSA:2.30.30.280 214 270 2.0E-17 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 CLI_RS14475 462ae935c144a12060b178095e4ebfb6 353 Gene3D G3DSA:3.40.50.620 2 206 3.3E-84 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS01445 2ac1535d47ed800bf8f59f8b738309fa 324 Pfam PF03812 2-keto-3-deoxygluconate permease 5 305 7.9E-117 T 23-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLI_RS01445 2ac1535d47ed800bf8f59f8b738309fa 324 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 16 257 7.0E-53 T 23-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLI_RS05255 2199614ee05b83abc26110b4a412e147 507 PANTHER PTHR30003:SF3 1 507 2.2E-291 T 23-04-2016 CLI_RS05255 2199614ee05b83abc26110b4a412e147 507 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 502 9.6E-138 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CLI_RS05255 2199614ee05b83abc26110b4a412e147 507 PANTHER PTHR30003 1 507 2.2E-291 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CLI_RS05255 2199614ee05b83abc26110b4a412e147 507 Pfam PF02652 L-lactate permease 7 500 2.9E-142 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CLI_RS11355 45846beefea293f934a50893db41ce63 112 Pfam PF12788 YmaF family 10 104 6.6E-40 T 23-04-2016 IPR024307 YmaF CLI_RS02020 150a43545e6bbab2b3ef5ee34699d183 336 PANTHER PTHR30106 1 336 1.7E-182 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CLI_RS02020 150a43545e6bbab2b3ef5ee34699d183 336 PANTHER PTHR30106:SF1 1 336 1.7E-182 T 23-04-2016 CLI_RS02020 150a43545e6bbab2b3ef5ee34699d183 336 Pfam PF03601 Conserved hypothetical protein 698 9 315 1.9E-86 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CLI_RS17395 862178699b11b328fe575cc58da6483c 228 Pfam PF00005 ABC transporter 18 165 3.3E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS17395 862178699b11b328fe575cc58da6483c 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 2.1E-87 T 23-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CLI_RS17395 862178699b11b328fe575cc58da6483c 228 Gene3D G3DSA:3.40.50.300 1 219 3.1E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17395 862178699b11b328fe575cc58da6483c 228 PANTHER PTHR24220 3 228 2.8E-122 T 23-04-2016 CLI_RS17395 862178699b11b328fe575cc58da6483c 228 SUPERFAMILY SSF52540 1 219 3.55E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17395 862178699b11b328fe575cc58da6483c 228 PANTHER PTHR24220:SF470 3 228 2.8E-122 T 23-04-2016 CLI_RS17395 862178699b11b328fe575cc58da6483c 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS17395 862178699b11b328fe575cc58da6483c 228 SMART SM00382 27 214 4.5E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS01590 c45fdcfb55293e253ec71dfa0304030b 256 SUPERFAMILY SSF52540 3 224 3.38E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01590 c45fdcfb55293e253ec71dfa0304030b 256 Pfam PF00005 ABC transporter 25 173 2.6E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS01590 c45fdcfb55293e253ec71dfa0304030b 256 SMART SM00382 34 221 7.7E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS01590 c45fdcfb55293e253ec71dfa0304030b 256 PANTHER PTHR24220 5 244 8.0E-156 T 23-04-2016 CLI_RS01590 c45fdcfb55293e253ec71dfa0304030b 256 PANTHER PTHR24220:SF583 5 244 8.0E-156 T 23-04-2016 CLI_RS01590 c45fdcfb55293e253ec71dfa0304030b 256 Gene3D G3DSA:3.40.50.300 2 223 9.7E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16900 d2d567600da5ec18ab3b92daa9b63b06 305 Gene3D G3DSA:3.30.310.40 20 85 1.4E-11 T 23-04-2016 CLI_RS16900 d2d567600da5ec18ab3b92daa9b63b06 305 Pfam PF07934 8-oxoguanine DNA glycosylase, N-terminal domain 16 118 7.9E-24 T 23-04-2016 IPR012904 8-oxoguanine DNA glycosylase, N-terminal GO:0003684|GO:0006289|GO:0008534 CLI_RS16900 d2d567600da5ec18ab3b92daa9b63b06 305 SMART SM00478 124 296 1.2E-9 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CLI_RS16900 d2d567600da5ec18ab3b92daa9b63b06 305 SUPERFAMILY SSF48150 114 296 1.05E-37 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CLI_RS16900 d2d567600da5ec18ab3b92daa9b63b06 305 SUPERFAMILY SSF55945 12 113 2.67E-22 T 23-04-2016 CLI_RS16900 d2d567600da5ec18ab3b92daa9b63b06 305 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 120 271 1.3E-15 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CLI_RS16900 d2d567600da5ec18ab3b92daa9b63b06 305 PANTHER PTHR10242:SF2 19 294 1.2E-63 T 23-04-2016 CLI_RS16900 d2d567600da5ec18ab3b92daa9b63b06 305 Gene3D G3DSA:1.10.1670.10 237 294 9.9E-14 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLI_RS16900 d2d567600da5ec18ab3b92daa9b63b06 305 PANTHER PTHR10242 19 294 1.2E-63 T 23-04-2016 CLI_RS16900 d2d567600da5ec18ab3b92daa9b63b06 305 Gene3D G3DSA:1.10.340.30 114 236 1.1E-37 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CLI_RS02720 569b43fff9b159e92492005a588a7740 217 SUPERFAMILY SSF53335 27 213 1.33E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS02720 569b43fff9b159e92492005a588a7740 217 Pfam PF02390 Putative methyltransferase 38 210 5.7E-40 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CLI_RS02720 569b43fff9b159e92492005a588a7740 217 Gene3D G3DSA:3.40.50.150 30 182 1.3E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS02720 569b43fff9b159e92492005a588a7740 217 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 26 210 9.6E-46 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CLI_RS02720 569b43fff9b159e92492005a588a7740 217 PANTHER PTHR23417 1 215 2.0E-59 T 23-04-2016 CLI_RS02720 569b43fff9b159e92492005a588a7740 217 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 217 25.327 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CLI_RS02720 569b43fff9b159e92492005a588a7740 217 PANTHER PTHR23417:SF14 1 215 2.0E-59 T 23-04-2016 CLI_RS16715 41cd6c4b554806bf8930d6aa26a1c7ec 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 471 2.1E-179 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CLI_RS16715 41cd6c4b554806bf8930d6aa26a1c7ec 476 PANTHER PTHR11659 2 476 1.5E-253 T 23-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 CLI_RS16715 41cd6c4b554806bf8930d6aa26a1c7ec 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 142 156 - T 23-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CLI_RS16715 41cd6c4b554806bf8930d6aa26a1c7ec 476 PANTHER PTHR11659:SF0 2 476 1.5E-253 T 23-04-2016 CLI_RS16715 41cd6c4b554806bf8930d6aa26a1c7ec 476 Pfam PF02934 GatB/GatE catalytic domain 5 287 2.8E-115 T 23-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CLI_RS16715 41cd6c4b554806bf8930d6aa26a1c7ec 476 SUPERFAMILY SSF89095 295 401 3.01E-33 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CLI_RS16715 41cd6c4b554806bf8930d6aa26a1c7ec 476 Pfam PF02637 GatB domain 326 471 5.1E-52 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 CLI_RS16715 41cd6c4b554806bf8930d6aa26a1c7ec 476 SUPERFAMILY SSF55931 4 294 1.24E-121 T 23-04-2016 CLI_RS16715 41cd6c4b554806bf8930d6aa26a1c7ec 476 SMART SM00845 326 473 1.3E-72 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 CLI_RS16715 41cd6c4b554806bf8930d6aa26a1c7ec 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 474 39.011 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CLI_RS16715 41cd6c4b554806bf8930d6aa26a1c7ec 476 Gene3D G3DSA:1.10.10.410 419 471 1.5E-4 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 Gene3D G3DSA:3.30.930.10 136 367 3.3E-149 T 23-04-2016 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 Gene3D G3DSA:3.30.930.10 8 92 3.3E-149 T 23-04-2016 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 407 426 1.25E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 220 230 1.25E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 171 188 1.25E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 150 162 1.25E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 26 40 1.25E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 327 339 1.25E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 203 220 1.25E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 Pfam PF03129 Anticodon binding domain 372 459 6.8E-25 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 6 245 1.4E-93 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 164 343 3.1E-10 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 4 462 52.478 T 23-04-2016 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 SUPERFAMILY SSF52954 359 461 6.34E-35 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 PANTHER PTHR10745 7 459 2.0E-224 T 23-04-2016 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 KEGG: 00970+6.1.1.14 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 SUPERFAMILY SSF55681 6 375 9.38E-129 T 23-04-2016 CLI_RS18095 7a29a6dcd983358ffed4c7e77b04f487 463 Gene3D G3DSA:3.40.50.800 368 461 3.6E-40 T 23-04-2016 IPR004154 Anticodon-binding CLI_RS08645 fbe0f60e8438403573d5a0015962b938 667 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 646 1.9E-41 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS08645 fbe0f60e8438403573d5a0015962b938 667 SMART SM00283 390 665 2.3E-61 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS08645 fbe0f60e8438403573d5a0015962b938 667 PANTHER PTHR32089:SF61 6 667 0.0 T 23-04-2016 CLI_RS08645 fbe0f60e8438403573d5a0015962b938 667 Pfam PF00672 HAMP domain 287 349 2.1E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS08645 fbe0f60e8438403573d5a0015962b938 667 SUPERFAMILY SSF103190 108 162 2.17E-5 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS08645 fbe0f60e8438403573d5a0015962b938 667 PANTHER PTHR32089 6 667 0.0 T 23-04-2016 CLI_RS08645 fbe0f60e8438403573d5a0015962b938 667 Gene3D G3DSA:3.30.450.20 137 282 7.1E-30 T 23-04-2016 CLI_RS08645 fbe0f60e8438403573d5a0015962b938 667 SUPERFAMILY SSF58104 396 665 3.66E-66 T 23-04-2016 CLI_RS08645 fbe0f60e8438403573d5a0015962b938 667 SUPERFAMILY SSF58104 327 363 3.66E-66 T 23-04-2016 CLI_RS08645 fbe0f60e8438403573d5a0015962b938 667 Gene3D G3DSA:1.10.287.950 405 622 3.7E-50 T 23-04-2016 CLI_RS08645 fbe0f60e8438403573d5a0015962b938 667 Pfam PF02743 Cache domain 37 268 9.5E-30 T 23-04-2016 IPR033479 Double Cache domain 1 CLI_RS08005 3cfc1b378d2e6af0512e038703171157 219 PANTHER PTHR11587 1 214 2.9E-100 T 23-04-2016 CLI_RS08005 3cfc1b378d2e6af0512e038703171157 219 PANTHER PTHR11587:SF3 1 214 2.9E-100 T 23-04-2016 CLI_RS08005 3cfc1b378d2e6af0512e038703171157 219 Gene3D G3DSA:3.40.50.620 3 213 5.0E-82 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS08005 3cfc1b378d2e6af0512e038703171157 219 SUPERFAMILY SSF52402 3 212 4.85E-67 T 23-04-2016 CLI_RS08005 3cfc1b378d2e6af0512e038703171157 219 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 217 48.75 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CLI_RS08005 3cfc1b378d2e6af0512e038703171157 219 PIRSF PIRSF006293 2 216 1.3E-77 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CLI_RS08005 3cfc1b378d2e6af0512e038703171157 219 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 206 1.1E-82 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CLI_RS08005 3cfc1b378d2e6af0512e038703171157 219 Pfam PF06508 Queuosine biosynthesis protein QueC 5 213 1.1E-85 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 SMART SM00304 193 246 5.3E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 SUPERFAMILY SSF47384 232 310 4.9E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 SMART SM00388 247 311 9.5E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 Gene3D G3DSA:1.10.287.130 238 297 5.9E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 Pfam PF00672 HAMP domain 174 243 7.1E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 6.7E-19 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 6.7E-19 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 6.7E-19 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 6.7E-19 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 PANTHER PTHR24423 187 464 4.9E-78 T 23-04-2016 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 PANTHER PTHR24423 1 11 4.9E-78 T 23-04-2016 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 SUPERFAMILY SSF55874 300 465 2.62E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 Gene3D G3DSA:3.30.565.10 298 465 1.8E-49 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 SUPERFAMILY SSF158472 195 243 4.05E-6 T 23-04-2016 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 310 7.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 466 3.4E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05485 cc74a029fc88bd5aa26a88c55f0db3d1 468 SMART SM00387 356 468 2.0E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS12740 a14d39e7c959f2458d1d8ffeae3b50e2 157 Pfam PF09557 Domain of unknown function (DUF2382) 31 139 1.0E-29 T 23-04-2016 IPR019060 Domain of unknown function DUF2382 CLI_RS12740 a14d39e7c959f2458d1d8ffeae3b50e2 157 TIGRFAM TIGR02271 TIGR02271: conserved domain 31 144 1.6E-46 T 23-04-2016 IPR019060 Domain of unknown function DUF2382 CLI_RS12740 a14d39e7c959f2458d1d8ffeae3b50e2 157 PANTHER PTHR38463 1 157 5.1E-58 T 23-04-2016 CLI_RS12740 a14d39e7c959f2458d1d8ffeae3b50e2 157 PANTHER PTHR38463:SF1 1 157 5.1E-58 T 23-04-2016 CLI_RS05060 d81822009c7ed2d7955cbccc8db3f53f 342 TIGRFAM TIGR02910 sulfite_red_A: sulfite reductase, subunit A 1 337 4.1E-187 T 23-04-2016 IPR014259 Sulphite reductase, subunit A UniPathway: UPA00370 CLI_RS05060 d81822009c7ed2d7955cbccc8db3f53f 342 Pfam PF17179 4Fe-4S dicluster domain 224 320 2.8E-34 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS05060 d81822009c7ed2d7955cbccc8db3f53f 342 SUPERFAMILY SSF46548 223 331 1.22E-14 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS05060 d81822009c7ed2d7955cbccc8db3f53f 342 Gene3D G3DSA:1.10.1060.10 200 334 2.5E-11 T 23-04-2016 CLI_RS05060 d81822009c7ed2d7955cbccc8db3f53f 342 PANTHER PTHR40447 1 342 1.8E-134 T 23-04-2016 CLI_RS05060 d81822009c7ed2d7955cbccc8db3f53f 342 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 306 317 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS05060 d81822009c7ed2d7955cbccc8db3f53f 342 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 225 236 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS04320 b6a8a13f0d61a16ddd17a58bbd730203 507 Pfam PF07664 Ferrous iron transport protein B C terminus 295 343 8.9E-15 T 23-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CLI_RS04320 b6a8a13f0d61a16ddd17a58bbd730203 507 PANTHER PTHR11649 91 507 1.0E-102 T 23-04-2016 CLI_RS04320 b6a8a13f0d61a16ddd17a58bbd730203 507 PANTHER PTHR11649:SF37 91 507 1.0E-102 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLI_RS04320 b6a8a13f0d61a16ddd17a58bbd730203 507 Pfam PF07670 Nucleoside recognition 181 270 8.7E-6 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS04320 b6a8a13f0d61a16ddd17a58bbd730203 507 Pfam PF07670 Nucleoside recognition 353 477 2.5E-15 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS05590 cacd3a32d30ccf6c8a1f10ee2f46fdf6 639 SUPERFAMILY SSF52540 5 233 8.38E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05590 cacd3a32d30ccf6c8a1f10ee2f46fdf6 639 Pfam PF16326 ABC transporter C-terminal domain 561 626 1.3E-11 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CLI_RS05590 cacd3a32d30ccf6c8a1f10ee2f46fdf6 639 SMART SM00382 343 513 2.4E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS05590 cacd3a32d30ccf6c8a1f10ee2f46fdf6 639 SMART SM00382 28 232 1.7E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS05590 cacd3a32d30ccf6c8a1f10ee2f46fdf6 639 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS05590 cacd3a32d30ccf6c8a1f10ee2f46fdf6 639 PANTHER PTHR19211 1 571 6.8E-212 T 23-04-2016 CLI_RS05590 cacd3a32d30ccf6c8a1f10ee2f46fdf6 639 Gene3D G3DSA:3.40.50.300 5 283 4.0E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05590 cacd3a32d30ccf6c8a1f10ee2f46fdf6 639 SUPERFAMILY SSF52540 311 523 5.26E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05590 cacd3a32d30ccf6c8a1f10ee2f46fdf6 639 Gene3D G3DSA:3.40.50.300 316 548 7.6E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05590 cacd3a32d30ccf6c8a1f10ee2f46fdf6 639 Pfam PF12848 ABC transporter 226 296 6.1E-13 T 23-04-2016 IPR032781 ABC-transporter extension domain CLI_RS05590 cacd3a32d30ccf6c8a1f10ee2f46fdf6 639 Pfam PF00005 ABC transporter 20 187 1.2E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS05590 cacd3a32d30ccf6c8a1f10ee2f46fdf6 639 Pfam PF00005 ABC transporter 336 469 9.8E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS01605 7d192805c43f72dc78c815f4d7d5e464 523 Pfam PF00367 phosphotransferase system, EIIB 452 483 1.5E-13 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS01605 7d192805c43f72dc78c815f4d7d5e464 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 461 478 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS01605 7d192805c43f72dc78c815f4d7d5e464 523 SUPERFAMILY SSF55604 448 521 1.18E-21 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS01605 7d192805c43f72dc78c815f4d7d5e464 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 407 507 2.1E-20 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS01605 7d192805c43f72dc78c815f4d7d5e464 523 PANTHER PTHR30009 6 523 0.0 T 23-04-2016 CLI_RS01605 7d192805c43f72dc78c815f4d7d5e464 523 Pfam PF02378 Phosphotransferase system, EIIC 14 348 2.3E-59 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS01605 7d192805c43f72dc78c815f4d7d5e464 523 PANTHER PTHR30009:SF5 6 523 0.0 T 23-04-2016 CLI_RS01605 7d192805c43f72dc78c815f4d7d5e464 523 Gene3D G3DSA:3.30.1360.60 446 522 3.1E-26 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS04465 2d0bcfb18bb73c3dcff9c613856c57de 305 PANTHER PTHR24220 5 238 5.5E-130 T 23-04-2016 CLI_RS04465 2d0bcfb18bb73c3dcff9c613856c57de 305 PANTHER PTHR24220:SF428 5 238 5.5E-130 T 23-04-2016 CLI_RS04465 2d0bcfb18bb73c3dcff9c613856c57de 305 Gene3D G3DSA:3.40.50.300 3 233 1.8E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04465 2d0bcfb18bb73c3dcff9c613856c57de 305 SUPERFAMILY SSF52540 3 227 7.78E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04465 2d0bcfb18bb73c3dcff9c613856c57de 305 Pfam PF00005 ABC transporter 20 164 1.1E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS04465 2d0bcfb18bb73c3dcff9c613856c57de 305 SMART SM00382 29 215 2.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03990 9e1afd22b25b2390dd5617fe5d2b6172 75 Pfam PF11148 Protein of unknown function (DUF2922) 5 71 1.7E-22 T 23-04-2016 IPR021321 Protein of unknown function DUF2922 CLI_RS02030 8568340c01d4e12d6757ee9541634b4a 232 PANTHER PTHR26402:SF50 4 232 1.6E-115 T 23-04-2016 CLI_RS02030 8568340c01d4e12d6757ee9541634b4a 232 SMART SM00448 4 114 8.6E-46 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS02030 8568340c01d4e12d6757ee9541634b4a 232 SMART SM00862 154 230 9.1E-28 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS02030 8568340c01d4e12d6757ee9541634b4a 232 Gene3D G3DSA:3.40.50.2300 4 128 1.5E-42 T 23-04-2016 CLI_RS02030 8568340c01d4e12d6757ee9541634b4a 232 Gene3D G3DSA:1.10.10.10 131 231 2.3E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02030 8568340c01d4e12d6757ee9541634b4a 232 Pfam PF00072 Response regulator receiver domain 6 114 1.0E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS02030 8568340c01d4e12d6757ee9541634b4a 232 PANTHER PTHR26402 4 232 1.6E-115 T 23-04-2016 CLI_RS02030 8568340c01d4e12d6757ee9541634b4a 232 SUPERFAMILY SSF52172 4 126 9.25E-43 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS02030 8568340c01d4e12d6757ee9541634b4a 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 7.2E-28 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS02030 8568340c01d4e12d6757ee9541634b4a 232 SUPERFAMILY SSF46894 129 230 2.27E-31 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS05950 8f1906e64f1bc3cb2133ac25faeb1097 190 Pfam PF00156 Phosphoribosyl transferase domain 49 158 1.5E-6 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS05950 8f1906e64f1bc3cb2133ac25faeb1097 190 PANTHER PTHR11776 1 189 6.1E-79 T 23-04-2016 CLI_RS05950 8f1906e64f1bc3cb2133ac25faeb1097 190 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 190 40.046 T 23-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 CLI_RS05950 8f1906e64f1bc3cb2133ac25faeb1097 190 PANTHER PTHR11776:SF1 1 189 6.1E-79 T 23-04-2016 CLI_RS05950 8f1906e64f1bc3cb2133ac25faeb1097 190 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 188 1.6E-68 T 23-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 CLI_RS05950 8f1906e64f1bc3cb2133ac25faeb1097 190 SUPERFAMILY SSF53271 1 189 8.48E-42 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS05950 8f1906e64f1bc3cb2133ac25faeb1097 190 Gene3D G3DSA:3.40.50.2020 1 189 2.4E-57 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS12170 63a218ee1f476246f25ebb6f0bba7e77 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 404 499 8.3E-30 T 23-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain CLI_RS12170 63a218ee1f476246f25ebb6f0bba7e77 507 SUPERFAMILY SSF54211 9 167 3.68E-35 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS12170 63a218ee1f476246f25ebb6f0bba7e77 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 499 2.2E-179 T 23-04-2016 IPR004482 Mg chelatase-related protein CLI_RS12170 63a218ee1f476246f25ebb6f0bba7e77 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 396 2.5E-87 T 23-04-2016 IPR000523 Magnesium chelatase ChlI domain CLI_RS12170 63a218ee1f476246f25ebb6f0bba7e77 507 Gene3D G3DSA:3.40.50.300 189 390 4.1E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12170 63a218ee1f476246f25ebb6f0bba7e77 507 Gene3D G3DSA:3.30.230.10 5 167 6.0E-33 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS12170 63a218ee1f476246f25ebb6f0bba7e77 507 SUPERFAMILY SSF52540 189 499 1.94E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12170 63a218ee1f476246f25ebb6f0bba7e77 507 PANTHER PTHR32039:SF7 1 499 9.6E-259 T 23-04-2016 IPR004482 Mg chelatase-related protein CLI_RS12170 63a218ee1f476246f25ebb6f0bba7e77 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 142 1.0E-48 T 23-04-2016 CLI_RS12170 63a218ee1f476246f25ebb6f0bba7e77 507 PANTHER PTHR32039 1 499 9.6E-259 T 23-04-2016 CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 Gene3D G3DSA:3.30.565.10 131 301 2.7E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 191 301 1.6E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 SUPERFAMILY SSF47384 75 144 7.06E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 SUPERFAMILY SSF55874 134 300 8.12E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 Pfam PF00512 His Kinase A (phospho-acceptor) domain 80 142 8.6E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 SMART SM00387 190 302 8.3E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 SMART SM00388 78 144 7.4E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 Gene3D G3DSA:1.10.287.130 76 130 3.0E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 PANTHER PTHR24423 24 303 1.7E-66 T 23-04-2016 CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 262 280 3.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 299 3.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 245 255 3.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS11440 8bbb1734f0447e3d50ab13a9a0fb9b18 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 227 241 3.0E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS02810 7b07be4ffd50253b563686052de1b94d 137 ProSitePatterns PS00550 Hemerythrin family signature. 59 82 - T 23-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 CLI_RS02810 7b07be4ffd50253b563686052de1b94d 137 Pfam PF01814 Hemerythrin HHE cation binding domain 12 127 1.2E-12 T 23-04-2016 IPR012312 Haemerythrin-like CLI_RS02810 7b07be4ffd50253b563686052de1b94d 137 Gene3D G3DSA:1.20.120.50 1 131 2.1E-35 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CLI_RS02810 7b07be4ffd50253b563686052de1b94d 137 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 3 131 1.0E-35 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CLI_RS02810 7b07be4ffd50253b563686052de1b94d 137 PANTHER PTHR37164 1 137 1.4E-41 T 23-04-2016 CLI_RS02810 7b07be4ffd50253b563686052de1b94d 137 SUPERFAMILY SSF47188 1 131 1.44E-31 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CLI_RS09705 8a4a07ec45663d5ed272b01a1e18aa32 569 SMART SM00304 209 263 1.8E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS09705 8a4a07ec45663d5ed272b01a1e18aa32 569 SUPERFAMILY SSF58104 298 568 1.4E-57 T 23-04-2016 CLI_RS09705 8a4a07ec45663d5ed272b01a1e18aa32 569 SUPERFAMILY SSF58104 231 265 1.4E-57 T 23-04-2016 CLI_RS09705 8a4a07ec45663d5ed272b01a1e18aa32 569 PANTHER PTHR32089 8 569 8.5E-282 T 23-04-2016 CLI_RS09705 8a4a07ec45663d5ed272b01a1e18aa32 569 Gene3D G3DSA:1.10.287.950 242 314 2.4E-6 T 23-04-2016 CLI_RS09705 8a4a07ec45663d5ed272b01a1e18aa32 569 Gene3D G3DSA:1.10.287.950 315 524 1.2E-42 T 23-04-2016 CLI_RS09705 8a4a07ec45663d5ed272b01a1e18aa32 569 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 567 1.8E-29 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS09705 8a4a07ec45663d5ed272b01a1e18aa32 569 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 180 5.6E-32 T 23-04-2016 IPR024478 4HB MCP domain CLI_RS09705 8a4a07ec45663d5ed272b01a1e18aa32 569 Pfam PF00672 HAMP domain 191 259 9.2E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS09705 8a4a07ec45663d5ed272b01a1e18aa32 569 SMART SM00283 285 568 1.8E-32 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS09705 8a4a07ec45663d5ed272b01a1e18aa32 569 PANTHER PTHR32089:SF42 8 569 8.5E-282 T 23-04-2016 CLI_RS15795 d980236ec9b2d32e2bd0fa2b14bf62f8 168 PANTHER PTHR23091 2 168 3.0E-37 T 23-04-2016 CLI_RS15795 d980236ec9b2d32e2bd0fa2b14bf62f8 168 PANTHER PTHR23091:SF262 2 168 3.0E-37 T 23-04-2016 CLI_RS15795 d980236ec9b2d32e2bd0fa2b14bf62f8 168 SUPERFAMILY SSF55729 3 164 4.39E-35 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS15795 d980236ec9b2d32e2bd0fa2b14bf62f8 168 Gene3D G3DSA:3.40.630.30 1 165 1.1E-37 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS15795 d980236ec9b2d32e2bd0fa2b14bf62f8 168 Pfam PF00583 Acetyltransferase (GNAT) family 61 141 4.3E-17 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 541 563 3.2E-12 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 803 821 3.2E-12 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 665 689 3.2E-12 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 SUPERFAMILY SSF51971 754 831 8.12E-7 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 444 520 1.5E-14 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 SUPERFAMILY SSF51971 539 775 1.29E-43 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 PANTHER PTHR11938 444 835 1.2E-68 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 Gene3D G3DSA:3.20.20.70 44 104 2.3E-6 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 Gene3D G3DSA:3.20.20.70 210 400 2.3E-6 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 Gene3D G3DSA:3.20.20.70 158 177 2.3E-6 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 918 929 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 TIGRFAM TIGR03315 Se_ygfK: putative selenate reductase, YgfK subunit 2 1005 0.0 T 23-04-2016 IPR017701 Putative selenate reductase YgfK CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 Gene3D G3DSA:1.10.1060.10 443 541 1.0E-22 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 Gene3D G3DSA:1.10.1060.10 871 932 3.0E-7 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 Gene3D G3DSA:3.50.50.60 632 762 3.6E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 SUPERFAMILY SSF51395 45 135 1.95E-10 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 SUPERFAMILY SSF51395 196 247 1.95E-10 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 SUPERFAMILY SSF51395 277 399 1.95E-10 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 PANTHER PTHR11938:SF108 444 835 1.2E-68 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 540 828 2.9E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 766 782 3.0E-17 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 793 815 3.0E-17 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 669 687 3.0E-17 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 542 561 3.0E-17 T 23-04-2016 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 SUPERFAMILY SSF46548 444 550 5.23E-16 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 Gene3D G3DSA:3.50.50.60 763 837 3.0E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 SUPERFAMILY SSF46548 871 945 3.66E-7 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS14365 e0f8fbf8d5a2d9ffadfbf0e164a77a6c 1005 Gene3D G3DSA:3.50.50.60 542 631 8.1E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS09720 c6347de54a955059156507612edd5265 233 Gene3D G3DSA:1.10.10.10 133 232 9.8E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09720 c6347de54a955059156507612edd5265 233 PANTHER PTHR26402:SF50 4 233 7.9E-109 T 23-04-2016 CLI_RS09720 c6347de54a955059156507612edd5265 233 Gene3D G3DSA:3.40.50.2300 2 125 1.1E-38 T 23-04-2016 CLI_RS09720 c6347de54a955059156507612edd5265 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 2.5E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS09720 c6347de54a955059156507612edd5265 233 Pfam PF00072 Response regulator receiver domain 6 116 3.4E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS09720 c6347de54a955059156507612edd5265 233 PANTHER PTHR26402 4 233 7.9E-109 T 23-04-2016 CLI_RS09720 c6347de54a955059156507612edd5265 233 SMART SM00862 155 231 2.1E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS09720 c6347de54a955059156507612edd5265 233 SMART SM00448 4 115 3.6E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS09720 c6347de54a955059156507612edd5265 233 SUPERFAMILY SSF46894 132 231 3.97E-30 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS09720 c6347de54a955059156507612edd5265 233 SUPERFAMILY SSF52172 3 128 8.54E-39 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS10110 abd002c31df5c82ecffdc0026766c95c 363 Gene3D G3DSA:1.20.1090.10 160 358 2.8E-71 T 23-04-2016 CLI_RS10110 abd002c31df5c82ecffdc0026766c95c 363 PANTHER PTHR11496 1 361 6.6E-200 T 23-04-2016 CLI_RS10110 abd002c31df5c82ecffdc0026766c95c 363 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 1.9E-66 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 CLI_RS10110 abd002c31df5c82ecffdc0026766c95c 363 PANTHER PTHR11496:SF57 1 361 6.6E-200 T 23-04-2016 CLI_RS10110 abd002c31df5c82ecffdc0026766c95c 363 SUPERFAMILY SSF56796 3 355 1.44E-89 T 23-04-2016 CLI_RS10110 abd002c31df5c82ecffdc0026766c95c 363 PIRSF PIRSF000112 1 359 8.5E-93 T 23-04-2016 CLI_RS10110 abd002c31df5c82ecffdc0026766c95c 363 Gene3D G3DSA:3.40.50.1970 2 158 2.3E-41 T 23-04-2016 CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 PANTHER PTHR24365 77 328 4.5E-43 T 23-04-2016 CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 Pfam PF13855 Leucine rich repeat 236 291 3.6E-8 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 Pfam PF13855 Leucine rich repeat 104 158 7.7E-7 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 Gene3D G3DSA:3.80.10.10 77 218 1.3E-30 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 SUPERFAMILY SSF52058 77 330 2.95E-50 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 SMART SM00365 124 145 230.0 T 23-04-2016 CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 SMART SM00365 146 170 440.0 T 23-04-2016 CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 SMART SM00365 256 280 0.19 T 23-04-2016 CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 SMART SM00365 234 252 300.0 T 23-04-2016 CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 SMART SM00365 300 321 25.0 T 23-04-2016 CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 SMART SM00365 80 101 780.0 T 23-04-2016 CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 SMART SM00365 102 123 33.0 T 23-04-2016 CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 SMART SM00365 190 206 400.0 T 23-04-2016 CLI_RS15465 e4a3ec4b2286f8f2ca32743217873b1e 364 Gene3D G3DSA:3.80.10.10 219 332 2.5E-29 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 PANTHER PTHR10799 431 463 9.7E-292 T 23-04-2016 CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 Pfam PF00176 SNF2 family N-terminal domain 627 895 7.0E-62 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 SUPERFAMILY SSF52540 568 824 3.31E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 SUPERFAMILY SSF52540 826 1076 1.72E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 Pfam PF00271 Helicase conserved C-terminal domain 907 1018 1.6E-19 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 Gene3D G3DSA:3.40.50.300 602 782 7.2E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 PANTHER PTHR10799:SF633 431 463 9.7E-292 T 23-04-2016 CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 PANTHER PTHR10799:SF633 315 366 9.7E-292 T 23-04-2016 CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 PANTHER PTHR10799:SF633 92 122 9.7E-292 T 23-04-2016 CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 PANTHER PTHR10799:SF633 569 1074 9.7E-292 T 23-04-2016 CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 PANTHER PTHR10799:SF633 253 282 9.7E-292 T 23-04-2016 CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 Pfam PF08455 Bacterial SNF2 helicase associated 232 603 1.2E-92 T 23-04-2016 IPR013663 Helicase, SWF/SNF/SWI type, bacterial CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 SMART SM00487 606 793 4.5E-31 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 Gene3D G3DSA:3.40.50.300 904 1055 3.0E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 PANTHER PTHR10799 315 366 9.7E-292 T 23-04-2016 CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 PANTHER PTHR10799 92 122 9.7E-292 T 23-04-2016 CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 PANTHER PTHR10799 253 282 9.7E-292 T 23-04-2016 CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 SMART SM00490 936 1018 4.7E-25 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS08530 e939a8815cd5fda477ccb375c39863fc 1077 PANTHER PTHR10799 569 1074 9.7E-292 T 23-04-2016 CLI_RS17020 e9cb1b1de8fdb9c88e39535e5900602e 187 PANTHER PTHR37815:SF1 6 187 1.3E-84 T 23-04-2016 CLI_RS17020 e9cb1b1de8fdb9c88e39535e5900602e 187 Pfam PF07155 ECF-type riboflavin transporter, S component 11 179 2.9E-49 T 23-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 CLI_RS17020 e9cb1b1de8fdb9c88e39535e5900602e 187 PANTHER PTHR37815 6 187 1.3E-84 T 23-04-2016 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 SUPERFAMILY SSF47446 327 430 1.08E-35 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 SUPERFAMILY SSF52540 43 353 3.64E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 PANTHER PTHR11564:SF7 1 436 2.0E-274 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 Gene3D G3DSA:1.20.120.140 3 89 1.8E-35 T 23-04-2016 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 6.9E-23 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 PRINTS PR00364 Disease resistance protein signature 265 279 4.8E-5 T 23-04-2016 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 PRINTS PR00364 Disease resistance protein signature 103 118 4.8E-5 T 23-04-2016 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 PRINTS PR00364 Disease resistance protein signature 356 372 4.8E-5 T 23-04-2016 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 431 2.4E-189 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 Pfam PF02978 Signal peptide binding domain 327 429 7.0E-34 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 Pfam PF00448 SRP54-type protein, GTPase domain 102 296 1.9E-78 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 Gene3D G3DSA:1.10.260.30 327 432 2.4E-37 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 SMART SM00382 100 247 2.9E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 SMART SM00962 101 296 2.0E-118 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 SMART SM00963 2 87 1.8E-34 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 Gene3D G3DSA:3.40.50.300 98 297 5.1E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 448 34.884 T 23-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 CLI_RS12220 9a90976629f60e08ac3c44d6d4fec364 449 PANTHER PTHR11564 1 436 2.0E-274 T 23-04-2016 CLI_RS15280 82b1bb4a1da3b9b048892b329a103af9 111 Pfam PF02699 Preprotein translocase subunit 10 83 4.4E-23 T 23-04-2016 IPR003849 Preprotein translocase YajC CLI_RS15280 82b1bb4a1da3b9b048892b329a103af9 111 SMART SM01323 4 87 6.6E-27 T 23-04-2016 IPR003849 Preprotein translocase YajC CLI_RS15280 82b1bb4a1da3b9b048892b329a103af9 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 10 87 8.1E-18 T 23-04-2016 IPR003849 Preprotein translocase YajC CLI_RS15280 82b1bb4a1da3b9b048892b329a103af9 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 6 26 5.16E-8 T 23-04-2016 IPR003849 Preprotein translocase YajC CLI_RS15280 82b1bb4a1da3b9b048892b329a103af9 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 44 62 5.16E-8 T 23-04-2016 IPR003849 Preprotein translocase YajC CLI_RS15280 82b1bb4a1da3b9b048892b329a103af9 111 PANTHER PTHR33909 1 111 1.8E-29 T 23-04-2016 CLI_RS15280 82b1bb4a1da3b9b048892b329a103af9 111 PANTHER PTHR33909:SF1 1 111 1.8E-29 T 23-04-2016 CLI_RS06810 c22f375423c55f679b6677bb50bb149b 154 Gene3D G3DSA:2.30.110.10 1 152 4.9E-45 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS06810 c22f375423c55f679b6677bb50bb149b 154 PANTHER PTHR34071:SF1 1 151 9.5E-88 T 23-04-2016 CLI_RS06810 c22f375423c55f679b6677bb50bb149b 154 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 14 151 9.8E-20 T 23-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related CLI_RS06810 c22f375423c55f679b6677bb50bb149b 154 PANTHER PTHR34071 1 151 9.5E-88 T 23-04-2016 CLI_RS06810 c22f375423c55f679b6677bb50bb149b 154 SUPERFAMILY SSF50475 1 152 3.14E-44 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS17135 4841103a0323e998a0d200082869847e 190 Gene3D G3DSA:1.10.1740.10 3 106 7.7E-23 T 23-04-2016 CLI_RS17135 4841103a0323e998a0d200082869847e 190 Pfam PF04542 Sigma-70 region 2 23 88 1.3E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS17135 4841103a0323e998a0d200082869847e 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 176 3.5E-27 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS17135 4841103a0323e998a0d200082869847e 190 Pfam PF08281 Sigma-70, region 4 120 173 3.3E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS17135 4841103a0323e998a0d200082869847e 190 Gene3D G3DSA:1.10.10.10 116 178 4.3E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17135 4841103a0323e998a0d200082869847e 190 PANTHER PTHR30173:SF24 4 184 2.8E-35 T 23-04-2016 CLI_RS17135 4841103a0323e998a0d200082869847e 190 PANTHER PTHR30173 4 184 2.8E-35 T 23-04-2016 CLI_RS17135 4841103a0323e998a0d200082869847e 190 SUPERFAMILY SSF88659 110 177 1.4E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS17135 4841103a0323e998a0d200082869847e 190 SUPERFAMILY SSF88946 3 98 4.97E-21 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS17515 374e90ab93127c5c8062fcf7956d8b50 181 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 179 8.4E-90 T 23-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CLI_RS17515 374e90ab93127c5c8062fcf7956d8b50 181 PANTHER PTHR40399 2 181 4.9E-98 T 23-04-2016 CLI_RS17515 374e90ab93127c5c8062fcf7956d8b50 181 PIRSF PIRSF038321 1 181 1.4E-92 T 23-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CLI_RS17515 374e90ab93127c5c8062fcf7956d8b50 181 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 4 170 7.7E-81 T 23-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CLI_RS07200 57d017e1a0c3319ea3c6d714e334fc42 366 Pfam PF12698 ABC-2 family transporter protein 21 355 2.0E-28 T 23-04-2016 CLI_RS07200 57d017e1a0c3319ea3c6d714e334fc42 366 Gene3D G3DSA:3.40.1710.10 50 119 8.1E-5 T 23-04-2016 CLI_RS07200 57d017e1a0c3319ea3c6d714e334fc42 366 PANTHER PTHR30294:SF21 1 361 6.6E-92 T 23-04-2016 CLI_RS07200 57d017e1a0c3319ea3c6d714e334fc42 366 PANTHER PTHR30294 1 361 6.6E-92 T 23-04-2016 CLI_RS17540 3b61e5ce0b637989837bf375f3941f35 176 Gene3D G3DSA:3.40.920.10 5 176 3.3E-49 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLI_RS17540 3b61e5ce0b637989837bf375f3941f35 176 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 12 171 3.8E-35 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLI_RS17540 3b61e5ce0b637989837bf375f3941f35 176 PANTHER PTHR32154 4 176 1.5E-98 T 23-04-2016 CLI_RS17540 3b61e5ce0b637989837bf375f3941f35 176 PANTHER PTHR32154:SF15 4 176 1.5E-98 T 23-04-2016 CLI_RS17540 3b61e5ce0b637989837bf375f3941f35 176 SUPERFAMILY SSF53323 4 176 1.96E-42 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLI_RS17540 3b61e5ce0b637989837bf375f3941f35 176 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 6 175 4.4E-26 T 23-04-2016 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 CLI_RS09935 454eb282a1ae978cab6866fa923ac84d 389 PANTHER PTHR11751:SF21 4 388 1.4E-141 T 23-04-2016 CLI_RS09935 454eb282a1ae978cab6866fa923ac84d 389 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 386 1.3E-139 T 23-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CLI_RS09935 454eb282a1ae978cab6866fa923ac84d 389 PANTHER PTHR11751 4 388 1.4E-141 T 23-04-2016 CLI_RS09935 454eb282a1ae978cab6866fa923ac84d 389 SUPERFAMILY SSF53383 1 388 1.32E-90 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS09935 454eb282a1ae978cab6866fa923ac84d 389 Pfam PF00155 Aminotransferase class I and II 95 381 5.6E-31 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS09935 454eb282a1ae978cab6866fa923ac84d 389 Gene3D G3DSA:3.90.1150.10 252 388 3.6E-39 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS09935 454eb282a1ae978cab6866fa923ac84d 389 Gene3D G3DSA:3.40.640.10 68 251 2.7E-45 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS15425 9912acf87f27a0821ab6de2ab32bb88c 367 SUPERFAMILY SSF53756 1 366 2.51E-72 T 23-04-2016 CLI_RS15425 9912acf87f27a0821ab6de2ab32bb88c 367 Pfam PF13439 Glycosyltransferase Family 4 65 169 9.2E-13 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLI_RS15425 9912acf87f27a0821ab6de2ab32bb88c 367 Pfam PF00534 Glycosyl transferases group 1 179 343 5.5E-33 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CLI_RS15425 9912acf87f27a0821ab6de2ab32bb88c 367 Gene3D G3DSA:3.40.50.2000 160 342 1.5E-21 T 23-04-2016 CLI_RS15425 9912acf87f27a0821ab6de2ab32bb88c 367 PANTHER PTHR12526:SF374 3 367 4.8E-68 T 23-04-2016 CLI_RS15425 9912acf87f27a0821ab6de2ab32bb88c 367 PANTHER PTHR12526 3 367 4.8E-68 T 23-04-2016 CLI_RS02490 6ba4f08672053747b5ea09b62761f7fc 403 SUPERFAMILY SSF141868 4 201 5.89E-29 T 23-04-2016 IPR001633 EAL domain CLI_RS02490 6ba4f08672053747b5ea09b62761f7fc 403 PIRSF PIRSF003180 1 403 1.5E-121 T 23-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing CLI_RS02490 6ba4f08672053747b5ea09b62761f7fc 403 PANTHER PTHR33525 2 370 8.5E-139 T 23-04-2016 CLI_RS02490 6ba4f08672053747b5ea09b62761f7fc 403 Pfam PF00563 EAL domain 8 193 2.5E-18 T 23-04-2016 IPR001633 EAL domain CLI_RS02490 6ba4f08672053747b5ea09b62761f7fc 403 PANTHER PTHR33525:SF4 2 370 8.5E-139 T 23-04-2016 CLI_RS02490 6ba4f08672053747b5ea09b62761f7fc 403 Pfam PF08668 HDOD domain 209 322 4.6E-12 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CLI_RS02490 6ba4f08672053747b5ea09b62761f7fc 403 Gene3D G3DSA:1.10.3150.10 185 400 7.1E-28 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CLI_RS02490 6ba4f08672053747b5ea09b62761f7fc 403 SUPERFAMILY SSF109604 184 401 2.07E-36 T 23-04-2016 CLI_RS02490 6ba4f08672053747b5ea09b62761f7fc 403 SMART SM00052 1 198 9.8E-6 T 23-04-2016 IPR001633 EAL domain CLI_RS02490 6ba4f08672053747b5ea09b62761f7fc 403 Gene3D G3DSA:3.20.20.450 81 184 1.5E-14 T 23-04-2016 IPR001633 EAL domain CLI_RS14385 eb20cbd618e5224442ab2adeb75c4ad4 403 PANTHER PTHR10314 26 90 7.6E-176 T 23-04-2016 CLI_RS14385 eb20cbd618e5224442ab2adeb75c4ad4 403 PANTHER PTHR10314 112 401 7.6E-176 T 23-04-2016 CLI_RS14385 eb20cbd618e5224442ab2adeb75c4ad4 403 PANTHER PTHR10314:SF127 26 90 7.6E-176 T 23-04-2016 CLI_RS14385 eb20cbd618e5224442ab2adeb75c4ad4 403 PANTHER PTHR10314:SF127 112 401 7.6E-176 T 23-04-2016 CLI_RS14385 eb20cbd618e5224442ab2adeb75c4ad4 403 Gene3D G3DSA:3.40.50.1100 118 398 8.1E-33 T 23-04-2016 CLI_RS14385 eb20cbd618e5224442ab2adeb75c4ad4 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 42 380 5.2E-50 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS14385 eb20cbd618e5224442ab2adeb75c4ad4 403 SUPERFAMILY SSF53686 22 397 2.23E-58 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS14385 eb20cbd618e5224442ab2adeb75c4ad4 403 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 24 398 8.0E-186 T 23-04-2016 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 CLI_RS14385 eb20cbd618e5224442ab2adeb75c4ad4 403 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 4 399 7.9E-218 T 23-04-2016 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 CLI_RS00960 7b52aa98cc9122db4c97eb5149c97a9c 174 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 28 165 1.9E-46 T 23-04-2016 IPR009665 Protein of unknown function DUF1256 CLI_RS00960 7b52aa98cc9122db4c97eb5149c97a9c 174 SUPERFAMILY SSF53163 8 171 1.07E-44 T 23-04-2016 IPR023430 Peptidase HybD-like domain CLI_RS00960 7b52aa98cc9122db4c97eb5149c97a9c 174 Pfam PF06866 Protein of unknown function (DUF1256) 6 163 1.6E-63 T 23-04-2016 IPR009665 Protein of unknown function DUF1256 CLI_RS13695 aa15aba0d4b44a94c86a47d1752d9fb3 275 Pfam PF03123 CAT RNA binding domain 4 58 2.7E-18 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS13695 aa15aba0d4b44a94c86a47d1752d9fb3 275 SMART SM01061 4 61 1.5E-22 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS13695 aa15aba0d4b44a94c86a47d1752d9fb3 275 SUPERFAMILY SSF50151 4 54 2.75E-14 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS13695 aa15aba0d4b44a94c86a47d1752d9fb3 275 PANTHER PTHR30185 2 274 1.3E-142 T 23-04-2016 CLI_RS13695 aa15aba0d4b44a94c86a47d1752d9fb3 275 Gene3D G3DSA:2.30.24.10 4 55 6.9E-19 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 CLI_RS13695 aa15aba0d4b44a94c86a47d1752d9fb3 275 Gene3D G3DSA:1.10.1790.10 67 165 3.0E-28 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS13695 aa15aba0d4b44a94c86a47d1752d9fb3 275 Gene3D G3DSA:1.10.1790.10 172 272 9.9E-28 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS13695 aa15aba0d4b44a94c86a47d1752d9fb3 275 Pfam PF00874 PRD domain 183 271 2.0E-22 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS13695 aa15aba0d4b44a94c86a47d1752d9fb3 275 Pfam PF00874 PRD domain 77 163 1.8E-24 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS13695 aa15aba0d4b44a94c86a47d1752d9fb3 275 SUPERFAMILY SSF63520 61 168 2.62E-28 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS13695 aa15aba0d4b44a94c86a47d1752d9fb3 275 SUPERFAMILY SSF63520 175 271 3.66E-25 T 23-04-2016 IPR011608 PRD domain GO:0006355 CLI_RS13695 aa15aba0d4b44a94c86a47d1752d9fb3 275 PANTHER PTHR30185:SF3 2 274 1.3E-142 T 23-04-2016 CLI_RS09735 9d3158c499a0a69c46f3f89f5211c265 263 SMART SM00448 130 240 2.9E-11 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS09735 9d3158c499a0a69c46f3f89f5211c265 263 SMART SM00448 2 114 4.5E-6 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS09735 9d3158c499a0a69c46f3f89f5211c265 263 SUPERFAMILY SSF52172 1 119 2.99E-17 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS09735 9d3158c499a0a69c46f3f89f5211c265 263 Gene3D G3DSA:3.40.50.2300 126 251 3.3E-18 T 23-04-2016 CLI_RS09735 9d3158c499a0a69c46f3f89f5211c265 263 SUPERFAMILY SSF52172 123 263 1.57E-20 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS09735 9d3158c499a0a69c46f3f89f5211c265 263 Gene3D G3DSA:3.40.50.2300 2 125 9.1E-18 T 23-04-2016 CLI_RS09735 9d3158c499a0a69c46f3f89f5211c265 263 Pfam PF00072 Response regulator receiver domain 132 240 2.0E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS09735 9d3158c499a0a69c46f3f89f5211c265 263 Pfam PF00072 Response regulator receiver domain 4 114 6.4E-11 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS09735 9d3158c499a0a69c46f3f89f5211c265 263 PANTHER PTHR26402 2 141 1.4E-15 T 23-04-2016 CLI_RS10485 1de6f42e30821d3716c5f39e5b692e3b 307 PANTHER PTHR10366 2 306 3.0E-111 T 23-04-2016 CLI_RS10485 1de6f42e30821d3716c5f39e5b692e3b 307 Gene3D G3DSA:3.40.50.720 1 172 2.5E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS10485 1de6f42e30821d3716c5f39e5b692e3b 307 SUPERFAMILY SSF51735 1 305 3.56E-94 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS10485 1de6f42e30821d3716c5f39e5b692e3b 307 PANTHER PTHR10366:SF466 2 306 3.0E-111 T 23-04-2016 CLI_RS10485 1de6f42e30821d3716c5f39e5b692e3b 307 Gene3D G3DSA:3.90.25.10 173 306 5.2E-33 T 23-04-2016 CLI_RS10485 1de6f42e30821d3716c5f39e5b692e3b 307 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 297 4.6E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 Gene3D G3DSA:3.40.50.150 250 368 1.9E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 Gene3D G3DSA:3.40.50.150 145 214 1.9E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 Pfam PF01170 Putative RNA methylase family UPF0020 162 366 2.4E-56 T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 PANTHER PTHR18895 43 218 2.1E-95 T 23-04-2016 CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 PANTHER PTHR18895 252 376 2.1E-95 T 23-04-2016 CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 SUPERFAMILY SSF53335 253 370 1.86E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 SUPERFAMILY SSF53335 140 217 1.86E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 Pfam PF02926 THUMP domain 14 153 4.7E-9 T 23-04-2016 IPR004114 THUMP domain GO:0003723 CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 SMART SM00981 57 154 8.2E-7 T 23-04-2016 IPR004114 THUMP domain GO:0003723 CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 298 304 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 PANTHER PTHR18895:SF62 43 218 2.1E-95 T 23-04-2016 CLI_RS07630 8d52a63ff08eec83059093b73b059f76 380 PANTHER PTHR18895:SF62 252 376 2.1E-95 T 23-04-2016 CLI_RS10495 62e5253e5472c8d3a2cd5ca832195137 815 Pfam PF13439 Glycosyltransferase Family 4 219 373 7.3E-21 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLI_RS10495 62e5253e5472c8d3a2cd5ca832195137 815 PANTHER PTHR22916:SF15 8 416 3.6E-210 T 23-04-2016 CLI_RS10495 62e5253e5472c8d3a2cd5ca832195137 815 Pfam PF00534 Glycosyl transferases group 1 385 555 1.2E-9 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CLI_RS10495 62e5253e5472c8d3a2cd5ca832195137 815 Gene3D G3DSA:3.40.50.2000 363 553 1.8E-7 T 23-04-2016 CLI_RS10495 62e5253e5472c8d3a2cd5ca832195137 815 Gene3D G3DSA:3.90.550.10 9 181 1.2E-21 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10495 62e5253e5472c8d3a2cd5ca832195137 815 PANTHER PTHR22916 8 416 3.6E-210 T 23-04-2016 CLI_RS10495 62e5253e5472c8d3a2cd5ca832195137 815 SUPERFAMILY SSF53756 213 581 4.03E-48 T 23-04-2016 CLI_RS10495 62e5253e5472c8d3a2cd5ca832195137 815 SUPERFAMILY SSF53448 8 168 2.16E-22 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10495 62e5253e5472c8d3a2cd5ca832195137 815 Pfam PF00535 Glycosyl transferase family 2 9 113 2.2E-7 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CLI_RS06905 08fd816bd18ab61c160167f09434f4f6 486 PANTHER PTHR30032:SF1 1 397 8.7E-121 T 23-04-2016 CLI_RS06905 08fd816bd18ab61c160167f09434f4f6 486 Pfam PF04122 Putative cell wall binding repeat 2 31 118 6.9E-21 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS06905 08fd816bd18ab61c160167f09434f4f6 486 Pfam PF04122 Putative cell wall binding repeat 2 135 222 1.1E-12 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS06905 08fd816bd18ab61c160167f09434f4f6 486 Pfam PF04122 Putative cell wall binding repeat 2 240 323 7.7E-19 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS06905 08fd816bd18ab61c160167f09434f4f6 486 PANTHER PTHR30032 1 397 8.7E-121 T 23-04-2016 CLI_RS06905 08fd816bd18ab61c160167f09434f4f6 486 Pfam PF16800 IseA DL-endopeptidase inhibitor 332 482 2.8E-44 T 23-04-2016 IPR031841 DL-endopeptidase inhibitor IseA CLI_RS06925 dfc99feba7754ae73644c85e64c2e618 137 Gene3D G3DSA:1.10.10.10 1 135 1.2E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06925 dfc99feba7754ae73644c85e64c2e618 137 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 23-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site CLI_RS06925 dfc99feba7754ae73644c85e64c2e618 137 SUPERFAMILY SSF46785 2 134 6.77E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06925 dfc99feba7754ae73644c85e64c2e618 137 PANTHER PTHR33221 2 135 9.9E-60 T 23-04-2016 CLI_RS06925 dfc99feba7754ae73644c85e64c2e618 137 PANTHER PTHR33221:SF2 2 135 9.9E-60 T 23-04-2016 CLI_RS06925 dfc99feba7754ae73644c85e64c2e618 137 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 7.8E-31 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CLI_RS06925 dfc99feba7754ae73644c85e64c2e618 137 Pfam PF02082 Transcriptional regulator 1 83 5.1E-24 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CLI_RS06610 7ad0cccd01513fe626e88eb9ae942468 242 Gene3D G3DSA:3.30.240.20 169 229 2.8E-21 T 23-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLI_RS06610 7ad0cccd01513fe626e88eb9ae942468 242 Gene3D G3DSA:3.30.240.20 80 154 3.6E-27 T 23-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLI_RS06610 7ad0cccd01513fe626e88eb9ae942468 242 PANTHER PTHR34582 1 231 2.2E-111 T 23-04-2016 CLI_RS06610 7ad0cccd01513fe626e88eb9ae942468 242 Pfam PF04239 Protein of unknown function (DUF421) 88 204 1.4E-34 T 23-04-2016 IPR007353 Protein of unknown function DUF421 CLI_RS06610 7ad0cccd01513fe626e88eb9ae942468 242 PANTHER PTHR34582:SF6 1 231 2.2E-111 T 23-04-2016 CLI_RS06490 8b72e89de8fa1ad22f27099cfb8b9778 248 Pfam PF17115 N-terminal domain of toast_rack, DUF2154 47 139 2.8E-33 T 23-04-2016 IPR031346 Uncharacterised protein DUF2154, N-terminal CLI_RS06490 8b72e89de8fa1ad22f27099cfb8b9778 248 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 140 245 6.3E-7 T 23-04-2016 IPR024425 Cell wall-active antibiotics response 4TMS YvqF CLI_RS18690 2890991baf9f73ae8a498d9fa43db0a3 428 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CLI_RS18690 2890991baf9f73ae8a498d9fa43db0a3 428 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 CLI_RS18690 2890991baf9f73ae8a498d9fa43db0a3 428 Gene3D G3DSA:1.10.300.10 102 196 4.1E-37 T 23-04-2016 CLI_RS18690 2890991baf9f73ae8a498d9fa43db0a3 428 Gene3D G3DSA:3.40.440.10 2 93 8.3E-74 T 23-04-2016 CLI_RS18690 2890991baf9f73ae8a498d9fa43db0a3 428 Gene3D G3DSA:3.40.440.10 197 266 8.3E-74 T 23-04-2016 CLI_RS18690 2890991baf9f73ae8a498d9fa43db0a3 428 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 425 4.7E-175 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CLI_RS18690 2890991baf9f73ae8a498d9fa43db0a3 428 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 428 207.618 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CLI_RS18690 2890991baf9f73ae8a498d9fa43db0a3 428 Gene3D G3DSA:3.90.170.10 267 425 4.8E-68 T 23-04-2016 CLI_RS18690 2890991baf9f73ae8a498d9fa43db0a3 428 SMART SM00788 3 424 7.0E-287 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CLI_RS18690 2890991baf9f73ae8a498d9fa43db0a3 428 SUPERFAMILY SSF52540 1 426 2.55E-175 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18690 2890991baf9f73ae8a498d9fa43db0a3 428 PANTHER PTHR11846 5 428 5.9E-253 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CLI_RS18690 2890991baf9f73ae8a498d9fa43db0a3 428 Pfam PF00709 Adenylosuccinate synthetase 5 423 4.8E-184 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CLI_RS12025 e0e97089ca194f9c1e6542a7b97c76bc 433 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 23-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CLI_RS12025 e0e97089ca194f9c1e6542a7b97c76bc 433 SUPERFAMILY SSF63411 226 416 5.96E-39 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLI_RS12025 e0e97089ca194f9c1e6542a7b97c76bc 433 PANTHER PTHR11851 6 395 8.0E-117 T 23-04-2016 CLI_RS12025 e0e97089ca194f9c1e6542a7b97c76bc 433 Gene3D G3DSA:3.30.830.10 225 415 2.0E-41 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CLI_RS12025 e0e97089ca194f9c1e6542a7b97c76bc 433 Gene3D G3DSA:3.30.830.10 3 212 2.6E-60 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CLI_RS12025 e0e97089ca194f9c1e6542a7b97c76bc 433 SUPERFAMILY SSF63411 3 205 3.33E-65 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLI_RS12025 e0e97089ca194f9c1e6542a7b97c76bc 433 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 9.5E-42 T 23-04-2016 IPR011765 Peptidase M16, N-terminal CLI_RS12025 e0e97089ca194f9c1e6542a7b97c76bc 433 Pfam PF05193 Peptidase M16 inactive domain 166 341 2.5E-38 T 23-04-2016 IPR007863 Peptidase M16, C-terminal CLI_RS11610 4151bd67e32dc0d373e662f3977cdec3 36 Pfam PF12841 YvrJ protein family 4 31 1.1E-12 T 23-04-2016 IPR024419 Protein of unknown function YvrJ CLI_RS12445 b2465ee7af2c4f9b0de6a25883278167 436 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 84 227 1.5E-44 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CLI_RS12445 b2465ee7af2c4f9b0de6a25883278167 436 TIGRFAM TIGR04481 PR_assoc_PrdC: proline reductase-associated electron transfer protein PrdC 5 429 2.8E-199 T 23-04-2016 IPR031001 Proline reductase-associated electron transfer protein PrdC CLI_RS12445 b2465ee7af2c4f9b0de6a25883278167 436 SUPERFAMILY SSF142019 60 245 1.11E-50 T 23-04-2016 CLI_RS12445 b2465ee7af2c4f9b0de6a25883278167 436 Pfam PF13375 RnfC Barrel sandwich hybrid domain 7 59 5.8E-13 T 23-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain CLI_RS12445 b2465ee7af2c4f9b0de6a25883278167 436 PANTHER PTHR11780:SF1 7 312 5.0E-103 T 23-04-2016 CLI_RS12445 b2465ee7af2c4f9b0de6a25883278167 436 PANTHER PTHR11780 7 312 5.0E-103 T 23-04-2016 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 Pfam PF02743 Cache domain 35 268 6.3E-26 T 23-04-2016 IPR033479 Double Cache domain 1 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 PANTHER PTHR32089:SF36 97 587 1.5E-255 T 23-04-2016 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 PANTHER PTHR32089:SF36 609 670 1.5E-255 T 23-04-2016 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 Gene3D G3DSA:3.30.450.20 80 155 1.6E-17 T 23-04-2016 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 Pfam PF00672 HAMP domain 288 360 1.9E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 SMART SM00304 307 365 6.5E-4 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 SUPERFAMILY SSF103190 94 161 1.0E-5 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 SUPERFAMILY SSF58104 400 669 4.58E-68 T 23-04-2016 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 SUPERFAMILY SSF58104 340 367 4.58E-68 T 23-04-2016 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 PANTHER PTHR32089 97 587 1.5E-255 T 23-04-2016 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 PANTHER PTHR32089 609 670 1.5E-255 T 23-04-2016 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 Gene3D G3DSA:3.30.450.20 156 285 9.9E-23 T 23-04-2016 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 Gene3D G3DSA:1.10.287.950 409 627 1.4E-48 T 23-04-2016 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 462 668 5.6E-40 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS03645 168aae0123eda578cc6614d04ac48c2d 670 SMART SM00283 394 669 1.7E-61 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS12385 d775936266445c7ac1f5134005ab8c8a 150 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 20 149 3.9E-14 T 23-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 CLI_RS03410 0487861b478374d7bd45bc20804f429d 159 SUPERFAMILY SSF50475 3 159 6.09E-39 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS03410 0487861b478374d7bd45bc20804f429d 159 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 12 157 2.8E-16 T 23-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related CLI_RS03410 0487861b478374d7bd45bc20804f429d 159 Gene3D G3DSA:2.30.110.10 1 158 6.0E-46 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS03410 0487861b478374d7bd45bc20804f429d 159 PANTHER PTHR34071 1 158 3.5E-49 T 23-04-2016 CLI_RS14675 cd799f10c114cd3b8ad561bcf8512869 695 SUPERFAMILY SSF109604 477 678 4.08E-15 T 23-04-2016 CLI_RS14675 cd799f10c114cd3b8ad561bcf8512869 695 Pfam PF07698 7TM receptor with intracellular HD hydrolase 268 453 9.0E-45 T 23-04-2016 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain CLI_RS14675 cd799f10c114cd3b8ad561bcf8512869 695 TIGRFAM TIGR00277 HDIG: HDIG domain 475 573 6.3E-22 T 23-04-2016 IPR006675 HDIG domain CLI_RS14675 cd799f10c114cd3b8ad561bcf8512869 695 PANTHER PTHR36442 1 695 7.3E-232 T 23-04-2016 CLI_RS14675 cd799f10c114cd3b8ad561bcf8512869 695 Pfam PF07697 7TM-HD extracellular 44 261 8.0E-40 T 23-04-2016 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain CLI_RS14675 cd799f10c114cd3b8ad561bcf8512869 695 Gene3D G3DSA:1.10.3210.10 474 650 3.4E-22 T 23-04-2016 IPR006674 HD domain CLI_RS14675 cd799f10c114cd3b8ad561bcf8512869 695 Pfam PF01966 HD domain 478 622 9.9E-17 T 23-04-2016 IPR006674 HD domain CLI_RS14675 cd799f10c114cd3b8ad561bcf8512869 695 SMART SM00471 474 632 7.2E-10 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 512 528 2.2E-11 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 540 556 2.2E-11 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 571 596 2.2E-11 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 403 421 2.2E-11 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 Gene3D G3DSA:2.70.150.10 100 200 1.1E-29 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 Gene3D G3DSA:2.70.150.10 6 48 1.1E-29 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 Gene3D G3DSA:1.20.1110.10 62 99 6.5E-54 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 Gene3D G3DSA:1.20.1110.10 509 773 6.5E-54 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 Pfam PF00702 haloacid dehalogenase-like hydrolase 299 554 5.3E-23 T 23-04-2016 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 75 486 1.3E-44 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 506 627 1.4E-27 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 305 311 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 Gene3D G3DSA:3.40.1110.10 294 324 5.6E-4 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 PANTHER PTHR24093 12 784 0.0 T 23-04-2016 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 SUPERFAMILY SSF56784 297 366 1.87E-39 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 SUPERFAMILY SSF56784 438 598 1.87E-39 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 SUPERFAMILY SSF81665 6 105 3.53E-64 T 23-04-2016 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 SUPERFAMILY SSF81665 203 297 3.53E-64 T 23-04-2016 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 SUPERFAMILY SSF81665 589 782 3.53E-64 T 23-04-2016 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 PANTHER PTHR24093:SF298 12 784 0.0 T 23-04-2016 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 303 317 3.1E-19 T 23-04-2016 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 472 3.1E-19 T 23-04-2016 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 559 3.1E-19 T 23-04-2016 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 152 166 3.1E-19 T 23-04-2016 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 563 575 3.1E-19 T 23-04-2016 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 SUPERFAMILY SSF81653 104 199 2.48E-21 T 23-04-2016 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 Pfam PF00122 E1-E2 ATPase 73 294 8.8E-53 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS06765 dfca3ac3dd328eb15e0dfebbd4134316 793 Gene3D G3DSA:3.40.1110.10 335 426 5.0E-9 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS04175 bf9a35bcf8d52c5f389e92e4498fa1f9 230 Gene3D G3DSA:3.40.50.300 2 220 1.6E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04175 bf9a35bcf8d52c5f389e92e4498fa1f9 230 SUPERFAMILY SSF52540 3 221 2.97E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04175 bf9a35bcf8d52c5f389e92e4498fa1f9 230 PANTHER PTHR24220:SF86 5 226 3.3E-105 T 23-04-2016 CLI_RS04175 bf9a35bcf8d52c5f389e92e4498fa1f9 230 SMART SM00382 32 218 9.3E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS04175 bf9a35bcf8d52c5f389e92e4498fa1f9 230 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS04175 bf9a35bcf8d52c5f389e92e4498fa1f9 230 PANTHER PTHR24220 5 226 3.3E-105 T 23-04-2016 CLI_RS04175 bf9a35bcf8d52c5f389e92e4498fa1f9 230 Pfam PF00005 ABC transporter 23 169 3.2E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS08030 cb417640e87d071818b6fdb808f13f46 312 PANTHER PTHR34294 1 312 1.2E-218 T 23-04-2016 CLI_RS08030 cb417640e87d071818b6fdb808f13f46 312 Gene3D G3DSA:1.10.10.10 2 46 1.2E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08030 cb417640e87d071818b6fdb808f13f46 312 Pfam PF04545 Sigma-70, region 4 14 45 1.2E-5 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08030 cb417640e87d071818b6fdb808f13f46 312 Gene3D G3DSA:3.40.50.1360 53 310 4.4E-81 T 23-04-2016 CLI_RS08030 cb417640e87d071818b6fdb808f13f46 312 SUPERFAMILY SSF100950 58 311 2.82E-72 T 23-04-2016 CLI_RS08030 cb417640e87d071818b6fdb808f13f46 312 PANTHER PTHR34294:SF3 1 312 1.2E-218 T 23-04-2016 CLI_RS08030 cb417640e87d071818b6fdb808f13f46 312 SUPERFAMILY SSF88659 12 46 8.5E-7 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08030 cb417640e87d071818b6fdb808f13f46 312 Pfam PF04198 Putative sugar-binding domain 58 310 8.1E-72 T 23-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 CLI_RS08970 db8a73993aca5bb82b96188099fbd2ae 138 SUPERFAMILY SSF53163 1 135 8.63E-19 T 23-04-2016 IPR023430 Peptidase HybD-like domain CLI_RS08970 db8a73993aca5bb82b96188099fbd2ae 138 Gene3D G3DSA:3.40.50.1450 1 133 2.2E-13 T 23-04-2016 IPR023430 Peptidase HybD-like domain CLI_RS08970 db8a73993aca5bb82b96188099fbd2ae 138 Pfam PF01750 Hydrogenase maturation protease 9 127 4.6E-6 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CLI_RS08970 db8a73993aca5bb82b96188099fbd2ae 138 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 1 128 3.1E-17 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CLI_RS11845 dad325791bc0b59078714fa870c55b29 93 Pfam PF08774 VRR-NUC domain 26 78 3.5E-8 T 23-04-2016 IPR014883 VRR-NUC domain GO:0016788 CLI_RS11845 dad325791bc0b59078714fa870c55b29 93 Gene3D G3DSA:3.40.1350.10 4 73 9.3E-4 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CLI_RS11845 dad325791bc0b59078714fa870c55b29 93 SMART SM00990 1 81 1.8E-25 T 23-04-2016 IPR014883 VRR-NUC domain GO:0016788 CLI_RS12405 b574d6d30a321a6ee8c2760787fef71e 372 TIGRFAM TIGR04481 PR_assoc_PrdC: proline reductase-associated electron transfer protein PrdC 5 371 4.4E-162 T 23-04-2016 IPR031001 Proline reductase-associated electron transfer protein PrdC CLI_RS12405 b574d6d30a321a6ee8c2760787fef71e 372 PANTHER PTHR11780 7 309 1.3E-109 T 23-04-2016 CLI_RS12405 b574d6d30a321a6ee8c2760787fef71e 372 PANTHER PTHR11780:SF1 7 309 1.3E-109 T 23-04-2016 CLI_RS12405 b574d6d30a321a6ee8c2760787fef71e 372 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 61 4.9E-12 T 23-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain CLI_RS12405 b574d6d30a321a6ee8c2760787fef71e 372 SUPERFAMILY SSF142019 42 245 1.29E-50 T 23-04-2016 CLI_RS12405 b574d6d30a321a6ee8c2760787fef71e 372 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 85 227 3.1E-43 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CLI_RS09875 810b82b8ec0508b7de1106eefc1ef2c0 490 Pfam PF02687 FtsX-like permease family 326 482 5.0E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS09875 810b82b8ec0508b7de1106eefc1ef2c0 490 PANTHER PTHR30572:SF11 165 409 3.1E-34 T 23-04-2016 CLI_RS09875 810b82b8ec0508b7de1106eefc1ef2c0 490 PANTHER PTHR30572:SF11 447 489 3.1E-34 T 23-04-2016 CLI_RS09875 810b82b8ec0508b7de1106eefc1ef2c0 490 PANTHER PTHR30572 165 409 3.1E-34 T 23-04-2016 CLI_RS09875 810b82b8ec0508b7de1106eefc1ef2c0 490 PANTHER PTHR30572 447 489 3.1E-34 T 23-04-2016 CLI_RS04335 20c587df4046141fb6dc1b40a2d7b850 248 PANTHER PTHR34148:SF1 1 248 2.6E-60 T 23-04-2016 CLI_RS04335 20c587df4046141fb6dc1b40a2d7b850 248 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 248 42.507 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 CLI_RS04335 20c587df4046141fb6dc1b40a2d7b850 248 PANTHER PTHR34148 1 248 2.6E-60 T 23-04-2016 CLI_RS04335 20c587df4046141fb6dc1b40a2d7b850 248 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 8 244 5.3E-46 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 CLI_RS04335 20c587df4046141fb6dc1b40a2d7b850 248 Pfam PF02654 Cobalamin-5-phosphate synthase 12 243 2.2E-54 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 CLI_RS15390 f1ad7cddddbc23c366ab7863d7159100 111 Gene3D G3DSA:3.30.750.24 2 110 1.7E-37 T 23-04-2016 IPR002645 STAS domain CLI_RS15390 f1ad7cddddbc23c366ab7863d7159100 111 Pfam PF01740 STAS domain 7 107 3.0E-24 T 23-04-2016 IPR002645 STAS domain CLI_RS15390 f1ad7cddddbc23c366ab7863d7159100 111 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 3 106 5.8E-31 T 23-04-2016 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 CLI_RS15390 f1ad7cddddbc23c366ab7863d7159100 111 PANTHER PTHR33495 1 110 7.3E-27 T 23-04-2016 CLI_RS15390 f1ad7cddddbc23c366ab7863d7159100 111 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 4 108 1.0E-42 T 23-04-2016 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 CLI_RS15390 f1ad7cddddbc23c366ab7863d7159100 111 SUPERFAMILY SSF52091 3 109 3.73E-30 T 23-04-2016 IPR002645 STAS domain CLI_RS10205 322f7f519433a44cd90e84e5dbe57eca 272 PANTHER PTHR30614 38 269 1.8E-81 T 23-04-2016 CLI_RS10205 322f7f519433a44cd90e84e5dbe57eca 272 PANTHER PTHR30614:SF15 38 269 1.8E-81 T 23-04-2016 CLI_RS10205 322f7f519433a44cd90e84e5dbe57eca 272 Gene3D G3DSA:3.40.190.10 126 224 1.5E-21 T 23-04-2016 CLI_RS10205 322f7f519433a44cd90e84e5dbe57eca 272 SMART SM00062 46 267 1.1E-53 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLI_RS10205 322f7f519433a44cd90e84e5dbe57eca 272 SUPERFAMILY SSF53850 9 263 7.39E-64 T 23-04-2016 CLI_RS10205 322f7f519433a44cd90e84e5dbe57eca 272 Gene3D G3DSA:3.40.190.10 226 263 2.6E-37 T 23-04-2016 CLI_RS10205 322f7f519433a44cd90e84e5dbe57eca 272 Gene3D G3DSA:3.40.190.10 41 125 2.6E-37 T 23-04-2016 CLI_RS10205 322f7f519433a44cd90e84e5dbe57eca 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 263 2.4E-59 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLI_RS13250 910c9f797934a6f133134ccaf39ce5d8 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 231 245 3.3E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLI_RS13250 910c9f797934a6f133134ccaf39ce5d8 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 3.3E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLI_RS13250 910c9f797934a6f133134ccaf39ce5d8 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 180 197 3.3E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLI_RS13250 910c9f797934a6f133134ccaf39ce5d8 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 150 168 3.3E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLI_RS13250 910c9f797934a6f133134ccaf39ce5d8 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 131 147 3.3E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLI_RS13250 910c9f797934a6f133134ccaf39ce5d8 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 3.3E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLI_RS13250 910c9f797934a6f133134ccaf39ce5d8 688 PIRSF PIRSF005419 2 688 6.9E-258 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLI_RS13250 910c9f797934a6f133134ccaf39ce5d8 688 Pfam PF00771 FHIPEP family 25 677 2.1E-272 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLI_RS13250 910c9f797934a6f133134ccaf39ce5d8 688 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 136 159 - T 23-04-2016 IPR025505 FHIPEP conserved site CLI_RS13250 910c9f797934a6f133134ccaf39ce5d8 688 PANTHER PTHR30161:SF1 1 688 0.0 T 23-04-2016 CLI_RS13250 910c9f797934a6f133134ccaf39ce5d8 688 PANTHER PTHR30161 1 688 0.0 T 23-04-2016 CLI_RS13250 910c9f797934a6f133134ccaf39ce5d8 688 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 15 685 5.0E-261 T 23-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CLI_RS11840 102912a09187b043d71cfc740f98b4aa 454 Pfam PF00271 Helicase conserved C-terminal domain 304 408 1.6E-5 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS11840 102912a09187b043d71cfc740f98b4aa 454 PANTHER PTHR10799:SF756 27 437 2.3E-36 T 23-04-2016 CLI_RS11840 102912a09187b043d71cfc740f98b4aa 454 Gene3D G3DSA:3.40.50.300 2 173 1.4E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11840 102912a09187b043d71cfc740f98b4aa 454 Gene3D G3DSA:3.40.50.300 303 435 9.6E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11840 102912a09187b043d71cfc740f98b4aa 454 SUPERFAMILY SSF52540 3 213 1.5E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11840 102912a09187b043d71cfc740f98b4aa 454 SUPERFAMILY SSF52540 121 176 4.2E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11840 102912a09187b043d71cfc740f98b4aa 454 SUPERFAMILY SSF52540 295 448 4.2E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11840 102912a09187b043d71cfc740f98b4aa 454 PANTHER PTHR10799 27 437 2.3E-36 T 23-04-2016 CLI_RS11840 102912a09187b043d71cfc740f98b4aa 454 SMART SM00487 1 188 8.0E-17 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS11840 102912a09187b043d71cfc740f98b4aa 454 Pfam PF00176 SNF2 family N-terminal domain 24 263 1.3E-23 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 CLI_RS13155 72270a1696ebd6f9ebf76521e6e6492a 199 Hamap MF_00311 V-type proton ATPase subunit E [atpE]. 2 199 14.168 T 23-04-2016 IPR002842 ATPase, V1/A1 complex, subunit E GO:0015991|GO:0033178|GO:0046961 CLI_RS13155 72270a1696ebd6f9ebf76521e6e6492a 199 Gene3D G3DSA:1.20.5.620 23 81 2.2E-4 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLI_RS13155 72270a1696ebd6f9ebf76521e6e6492a 199 SUPERFAMILY SSF160527 81 198 4.97E-20 T 23-04-2016 CLI_RS13155 72270a1696ebd6f9ebf76521e6e6492a 199 Pfam PF01991 ATP synthase (E/31 kDa) subunit 11 198 3.8E-21 T 23-04-2016 IPR002842 ATPase, V1/A1 complex, subunit E GO:0015991|GO:0033178|GO:0046961 CLI_RS13155 72270a1696ebd6f9ebf76521e6e6492a 199 SUPERFAMILY SSF81573 10 65 1.11E-5 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLI_RS06195 ed67284518a6e4560c077c0c7aa96963 206 SUPERFAMILY SSF46689 3 81 2.46E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS06195 ed67284518a6e4560c077c0c7aa96963 206 Gene3D G3DSA:1.10.357.10 62 204 6.7E-17 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS06195 ed67284518a6e4560c077c0c7aa96963 206 Gene3D G3DSA:1.10.10.60 3 43 3.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS06195 ed67284518a6e4560c077c0c7aa96963 206 SUPERFAMILY SSF48498 80 204 3.25E-23 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS06195 ed67284518a6e4560c077c0c7aa96963 206 PANTHER PTHR30055:SF27 1 166 2.0E-28 T 23-04-2016 CLI_RS06195 ed67284518a6e4560c077c0c7aa96963 206 Gene3D G3DSA:1.10.10.60 44 61 1.6E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS06195 ed67284518a6e4560c077c0c7aa96963 206 PANTHER PTHR30055 1 166 2.0E-28 T 23-04-2016 CLI_RS06195 ed67284518a6e4560c077c0c7aa96963 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 3.0E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS13045 7d218e7a44ec5a0ea1285e3bb1b9fe23 184 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 4 182 7.0E-52 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLI_RS13045 7d218e7a44ec5a0ea1285e3bb1b9fe23 184 PANTHER PTHR23407:SF1 1 183 1.7E-60 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLI_RS13045 7d218e7a44ec5a0ea1285e3bb1b9fe23 184 SUPERFAMILY SSF100950 3 182 3.91E-44 T 23-04-2016 CLI_RS13045 7d218e7a44ec5a0ea1285e3bb1b9fe23 184 PIRSF PIRSF006806 1 183 2.0E-48 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLI_RS13045 7d218e7a44ec5a0ea1285e3bb1b9fe23 184 Gene3D G3DSA:3.40.50.10420 4 182 1.6E-49 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CLI_RS13045 7d218e7a44ec5a0ea1285e3bb1b9fe23 184 PANTHER PTHR23407 1 183 1.7E-60 T 23-04-2016 CLI_RS13045 7d218e7a44ec5a0ea1285e3bb1b9fe23 184 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 182 5.2E-40 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 Gene3D G3DSA:2.60.120.10 18 91 2.9E-9 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 PANTHER PTHR11019 18 288 1.5E-61 T 23-04-2016 CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 SUPERFAMILY SSF51182 17 101 1.42E-10 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 SUPERFAMILY SSF46689 184 236 1.08E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 SMART SM00342 201 283 8.4E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 PANTHER PTHR11019:SF11 18 288 1.5E-61 T 23-04-2016 CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 Pfam PF02311 AraC-like ligand binding domain 26 112 1.5E-7 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 Pfam PF12833 Helix-turn-helix domain 208 284 7.6E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 Gene3D G3DSA:1.10.10.60 182 238 3.3E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 Gene3D G3DSA:1.10.10.60 245 287 6.2E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 SUPERFAMILY SSF46689 238 287 2.33E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 283 1.48E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS03045 97dee54da25e9a68d0c74dbe6d8fd51f 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 267 1.48E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 Pfam PF00364 Biotin-requiring enzyme 7 76 5.0E-17 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 Gene3D G3DSA:4.10.320.10 118 164 5.1E-16 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 Gene3D G3DSA:4.10.320.10 165 206 5.2E-9 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 Gene3D G3DSA:2.40.50.100 6 94 7.6E-28 T 23-04-2016 CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 Pfam PF02817 e3 binding domain 167 199 3.2E-5 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 Pfam PF02817 e3 binding domain 123 157 1.6E-11 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 215 435 2.6E-79 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 SUPERFAMILY SSF52777 216 436 4.27E-78 T 23-04-2016 CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 PANTHER PTHR23151 214 436 3.9E-151 T 23-04-2016 CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 PANTHER PTHR23151 7 191 3.9E-151 T 23-04-2016 CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 Gene3D G3DSA:3.30.559.10 213 436 4.2E-82 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 SUPERFAMILY SSF47005 117 162 9.02E-11 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 SUPERFAMILY SSF51230 6 88 1.96E-23 T 23-04-2016 IPR011053 Single hybrid motif CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 PANTHER PTHR23151:SF68 214 436 3.9E-151 T 23-04-2016 CLI_RS08375 22440d67fa3b5ba072d291446d1d4bee 436 PANTHER PTHR23151:SF68 7 191 3.9E-151 T 23-04-2016 CLI_RS12870 5e91b4ef0cf4a65fa20be879a78fbcd2 302 PANTHER PTHR31752 56 69 4.4E-88 T 23-04-2016 CLI_RS12870 5e91b4ef0cf4a65fa20be879a78fbcd2 302 PANTHER PTHR31752 87 302 4.4E-88 T 23-04-2016 CLI_RS12870 5e91b4ef0cf4a65fa20be879a78fbcd2 302 Pfam PF03547 Membrane transport protein 157 297 7.6E-16 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 CLI_RS12870 5e91b4ef0cf4a65fa20be879a78fbcd2 302 Pfam PF03547 Membrane transport protein 5 146 3.0E-19 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 CLI_RS12870 5e91b4ef0cf4a65fa20be879a78fbcd2 302 PANTHER PTHR31752:SF7 56 69 4.4E-88 T 23-04-2016 CLI_RS12870 5e91b4ef0cf4a65fa20be879a78fbcd2 302 PANTHER PTHR31752:SF7 87 302 4.4E-88 T 23-04-2016 CLI_RS05700 89b668efe3f8fd3d9020a82f490ce32f 270 PANTHER PTHR30429 1 270 9.6E-150 T 23-04-2016 IPR004872 Lipoprotein NlpA family CLI_RS05700 89b668efe3f8fd3d9020a82f490ce32f 270 Gene3D G3DSA:3.40.190.10 33 163 1.4E-58 T 23-04-2016 CLI_RS05700 89b668efe3f8fd3d9020a82f490ce32f 270 Pfam PF03180 NLPA lipoprotein 37 270 2.7E-96 T 23-04-2016 IPR004872 Lipoprotein NlpA family CLI_RS05700 89b668efe3f8fd3d9020a82f490ce32f 270 PIRSF PIRSF002854 1 270 5.3E-108 T 23-04-2016 IPR004872 Lipoprotein NlpA family CLI_RS05700 89b668efe3f8fd3d9020a82f490ce32f 270 PANTHER PTHR30429:SF0 1 270 9.6E-150 T 23-04-2016 CLI_RS05700 89b668efe3f8fd3d9020a82f490ce32f 270 SUPERFAMILY SSF53850 36 270 9.66E-86 T 23-04-2016 CLI_RS04945 8b221b960dbb31233d1144038733d150 359 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 20 358 7.0E-87 T 23-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 CLI_RS04945 8b221b960dbb31233d1144038733d150 359 PANTHER PTHR35863 2 359 6.7E-123 T 23-04-2016 CLI_RS04945 8b221b960dbb31233d1144038733d150 359 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 13 357 29.2 T 23-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 CLI_RS04945 8b221b960dbb31233d1144038733d150 359 Gene3D G3DSA:3.30.2110.10 15 183 1.8E-60 T 23-04-2016 CLI_RS04945 8b221b960dbb31233d1144038733d150 359 PANTHER PTHR35863:SF1 2 359 6.7E-123 T 23-04-2016 CLI_RS04945 8b221b960dbb31233d1144038733d150 359 SUPERFAMILY SSF111342 3 284 2.88E-86 T 23-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 CLI_RS04945 8b221b960dbb31233d1144038733d150 359 PIRSF PIRSF026782 9 359 1.2E-123 T 23-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 CLI_RS04945 8b221b960dbb31233d1144038733d150 359 Pfam PF01888 CbiD 13 267 1.7E-97 T 23-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 PANTHER PTHR21060:SF3 1 356 2.1E-219 T 23-04-2016 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 Gene3D G3DSA:3.30.420.40 180 324 7.4E-47 T 23-04-2016 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 PANTHER PTHR21060 1 356 2.1E-219 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 Hamap MF_00542 Probable butyrate kinase [buk]. 1 356 175.565 T 23-04-2016 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 Gene3D G3DSA:3.30.420.40 3 179 3.1E-88 T 23-04-2016 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 4 354 2.8E-176 T 23-04-2016 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 SUPERFAMILY SSF53067 119 348 1.24E-55 T 23-04-2016 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 179 196 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 PIRSF PIRSF036458 1 356 6.0E-176 T 23-04-2016 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 Pfam PF00871 Acetokinase family 4 352 6.4E-85 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 PRINTS PR00471 Acetate kinase family signature 179 200 2.5E-18 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 PRINTS PR00471 Acetate kinase family signature 297 313 2.5E-18 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 PRINTS PR00471 Acetate kinase family signature 5 16 2.5E-18 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 PRINTS PR00471 Acetate kinase family signature 274 287 2.5E-18 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CLI_RS17565 2d3545a71f29dfde865c4838f16757ae 356 SUPERFAMILY SSF53067 3 173 5.18E-76 T 23-04-2016 CLI_RS17235 ae4e1a32c9ddf4d09e1a2ba9f6438f64 106 PANTHER PTHR33204 11 101 2.8E-47 T 23-04-2016 CLI_RS17235 ae4e1a32c9ddf4d09e1a2ba9f6438f64 106 Pfam PF01638 HxlR-like helix-turn-helix 18 105 1.5E-33 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type CLI_RS17235 ae4e1a32c9ddf4d09e1a2ba9f6438f64 106 SUPERFAMILY SSF46785 8 105 1.82E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17235 ae4e1a32c9ddf4d09e1a2ba9f6438f64 106 Gene3D G3DSA:1.10.10.10 3 104 4.3E-40 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17235 ae4e1a32c9ddf4d09e1a2ba9f6438f64 106 PANTHER PTHR33204:SF12 11 101 2.8E-47 T 23-04-2016 CLI_RS11300 2243a9013a957f80bc23dbbe8eacbe93 90 PANTHER PTHR37812:SF1 1 90 7.3E-24 T 23-04-2016 CLI_RS11300 2243a9013a957f80bc23dbbe8eacbe93 90 PANTHER PTHR37812 1 90 7.3E-24 T 23-04-2016 CLI_RS11300 2243a9013a957f80bc23dbbe8eacbe93 90 Gene3D G3DSA:1.10.10.60 50 89 1.9E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS11300 2243a9013a957f80bc23dbbe8eacbe93 90 SUPERFAMILY SSF46689 1 89 7.53E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS01540 f0edcc8b1451f27ddc93d39f90303f0e 225 SMART SM00862 147 223 9.8E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS01540 f0edcc8b1451f27ddc93d39f90303f0e 225 PANTHER PTHR26402 3 224 3.4E-141 T 23-04-2016 CLI_RS01540 f0edcc8b1451f27ddc93d39f90303f0e 225 SUPERFAMILY SSF52172 4 177 7.03E-40 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS01540 f0edcc8b1451f27ddc93d39f90303f0e 225 PANTHER PTHR26402:SF559 3 224 3.4E-141 T 23-04-2016 CLI_RS01540 f0edcc8b1451f27ddc93d39f90303f0e 225 SMART SM00448 3 113 9.4E-40 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01540 f0edcc8b1451f27ddc93d39f90303f0e 225 Gene3D G3DSA:1.10.10.10 128 224 4.7E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01540 f0edcc8b1451f27ddc93d39f90303f0e 225 Gene3D G3DSA:3.40.50.2300 2 122 8.3E-38 T 23-04-2016 CLI_RS01540 f0edcc8b1451f27ddc93d39f90303f0e 225 Pfam PF00072 Response regulator receiver domain 5 114 1.3E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01540 f0edcc8b1451f27ddc93d39f90303f0e 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 1.2E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS11325 e9eb28729d06a15d04c71c584154043e 141 SUPERFAMILY SSF46785 23 134 2.51E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11325 e9eb28729d06a15d04c71c584154043e 141 SMART SM00347 22 122 2.3E-19 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11325 e9eb28729d06a15d04c71c584154043e 141 Gene3D G3DSA:1.10.10.10 23 137 2.9E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11325 e9eb28729d06a15d04c71c584154043e 141 Pfam PF01047 MarR family 29 87 6.4E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS11325 e9eb28729d06a15d04c71c584154043e 141 PANTHER PTHR33164 3 138 4.6E-18 T 23-04-2016 CLI_RS07380 1ff8a62689c4e71f8967a8c3f7fd672b 392 Gene3D G3DSA:3.40.630.10 300 391 1.3E-91 T 23-04-2016 CLI_RS07380 1ff8a62689c4e71f8967a8c3f7fd672b 392 Gene3D G3DSA:3.40.630.10 7 180 1.3E-91 T 23-04-2016 CLI_RS07380 1ff8a62689c4e71f8967a8c3f7fd672b 392 SUPERFAMILY SSF53187 8 199 1.51E-77 T 23-04-2016 CLI_RS07380 1ff8a62689c4e71f8967a8c3f7fd672b 392 SUPERFAMILY SSF53187 300 391 1.51E-77 T 23-04-2016 CLI_RS07380 1ff8a62689c4e71f8967a8c3f7fd672b 392 PIRSF PIRSF005962 2 392 2.3E-122 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 CLI_RS07380 1ff8a62689c4e71f8967a8c3f7fd672b 392 Pfam PF01546 Peptidase family M20/M25/M40 73 385 2.3E-34 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLI_RS07380 1ff8a62689c4e71f8967a8c3f7fd672b 392 Gene3D G3DSA:3.30.70.360 183 299 6.3E-40 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS07380 1ff8a62689c4e71f8967a8c3f7fd672b 392 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 378 1.0E-107 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 CLI_RS07380 1ff8a62689c4e71f8967a8c3f7fd672b 392 SUPERFAMILY SSF55031 188 292 3.14E-30 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS07380 1ff8a62689c4e71f8967a8c3f7fd672b 392 PANTHER PTHR11014:SF63 8 392 2.4E-157 T 23-04-2016 CLI_RS07380 1ff8a62689c4e71f8967a8c3f7fd672b 392 PANTHER PTHR11014 8 392 2.4E-157 T 23-04-2016 CLI_RS07380 1ff8a62689c4e71f8967a8c3f7fd672b 392 Pfam PF07687 Peptidase dimerisation domain 188 284 7.9E-14 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS16195 497e4af0f522a78d3178dc86c0f836ee 268 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 3.4E-19 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CLI_RS16195 497e4af0f522a78d3178dc86c0f836ee 268 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 1.9E-41 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CLI_RS16195 497e4af0f522a78d3178dc86c0f836ee 268 SUPERFAMILY SSF48179 161 268 7.48E-40 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLI_RS16195 497e4af0f522a78d3178dc86c0f836ee 268 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 6.7E-87 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CLI_RS16195 497e4af0f522a78d3178dc86c0f836ee 268 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CLI_RS16195 497e4af0f522a78d3178dc86c0f836ee 268 PIRSF PIRSF000193 2 268 1.1E-85 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CLI_RS16195 497e4af0f522a78d3178dc86c0f836ee 268 Gene3D G3DSA:3.40.50.720 2 159 6.9E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16195 497e4af0f522a78d3178dc86c0f836ee 268 SUPERFAMILY SSF51735 5 160 5.69E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16195 497e4af0f522a78d3178dc86c0f836ee 268 Gene3D G3DSA:1.10.3730.10 161 266 1.2E-45 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CLI_RS16195 497e4af0f522a78d3178dc86c0f836ee 268 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 27.581 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CLI_RS16195 497e4af0f522a78d3178dc86c0f836ee 268 PANTHER PTHR11645 1 268 5.4E-123 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CLI_RS16195 497e4af0f522a78d3178dc86c0f836ee 268 PANTHER PTHR11645:SF0 1 268 5.4E-123 T 23-04-2016 CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 Hamap MF_00384 Homoserine kinase [thrB]. 2 292 31.623 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 TIGRFAM TIGR00191 thrB: homoserine kinase 2 292 3.3E-84 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 PRINTS PR00958 Homoserine kinase signature 88 103 1.6E-38 T 23-04-2016 CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 PRINTS PR00958 Homoserine kinase signature 122 135 1.6E-38 T 23-04-2016 CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 PRINTS PR00958 Homoserine kinase signature 9 24 1.6E-38 T 23-04-2016 CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 PRINTS PR00958 Homoserine kinase signature 161 178 1.6E-38 T 23-04-2016 CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 PRINTS PR00958 Homoserine kinase signature 240 255 1.6E-38 T 23-04-2016 CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 PIRSF PIRSF000676 1 295 7.2E-87 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 PANTHER PTHR20861 1 296 3.7E-104 T 23-04-2016 CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 SUPERFAMILY SSF54211 1 146 4.17E-32 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 Pfam PF00288 GHMP kinases N terminal domain 74 135 2.5E-12 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 SUPERFAMILY SSF55060 157 276 1.75E-29 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 PANTHER PTHR20861:SF1 1 296 3.7E-104 T 23-04-2016 CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 Pfam PF08544 GHMP kinases C terminal 196 260 4.9E-6 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 Gene3D G3DSA:3.30.70.890 154 285 2.2E-41 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 Gene3D G3DSA:3.30.230.10 1 149 2.2E-52 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS08405 9a29ba21141dcd59d033a94c5bf51d35 297 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 81 92 - T 23-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CLI_RS15210 5458beb2caa8921418e5a41a47e31c92 142 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 138 7.9E-26 T 23-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC CLI_RS15210 5458beb2caa8921418e5a41a47e31c92 142 PIRSF PIRSF004923 1 142 1.6E-19 T 23-04-2016 IPR026268 Protein RseC CLI_RS15210 5458beb2caa8921418e5a41a47e31c92 142 PANTHER PTHR35867 1 141 8.9E-38 T 23-04-2016 CLI_RS15210 5458beb2caa8921418e5a41a47e31c92 142 PANTHER PTHR35867:SF1 1 141 8.9E-38 T 23-04-2016 CLI_RS01095 9a24bd3ccf114a4d701fddfac5fab68b 134 SMART SM00450 37 134 6.7E-12 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS01095 9a24bd3ccf114a4d701fddfac5fab68b 134 Pfam PF00581 Rhodanese-like domain 38 123 8.5E-17 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS01095 9a24bd3ccf114a4d701fddfac5fab68b 134 Gene3D G3DSA:3.40.250.10 29 128 1.0E-26 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS01095 9a24bd3ccf114a4d701fddfac5fab68b 134 SUPERFAMILY SSF52821 14 123 3.01E-27 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS16245 6273b3aa9989beab6d3b8dc049cc1a88 64 PRINTS PR00352 3Fe-4S ferredoxin signature 49 61 2.4E-8 T 23-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CLI_RS16245 6273b3aa9989beab6d3b8dc049cc1a88 64 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 2.4E-8 T 23-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CLI_RS16245 6273b3aa9989beab6d3b8dc049cc1a88 64 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 2.4E-8 T 23-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CLI_RS16245 6273b3aa9989beab6d3b8dc049cc1a88 64 PANTHER PTHR36923 1 64 4.5E-13 T 23-04-2016 CLI_RS16245 6273b3aa9989beab6d3b8dc049cc1a88 64 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 5 63 4.9E-20 T 23-04-2016 CLI_RS16245 6273b3aa9989beab6d3b8dc049cc1a88 64 PANTHER PTHR36923:SF2 1 64 4.5E-13 T 23-04-2016 CLI_RS16245 6273b3aa9989beab6d3b8dc049cc1a88 64 SUPERFAMILY SSF54862 1 63 2.51E-13 T 23-04-2016 CLI_RS16245 6273b3aa9989beab6d3b8dc049cc1a88 64 Gene3D G3DSA:3.30.70.20 1 64 1.9E-22 T 23-04-2016 CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 SMART SM00357 109 174 3.4E-14 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 SMART SM00959 5 47 2.0E-11 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 Gene3D G3DSA:2.40.50.140 4 45 6.1E-43 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 Gene3D G3DSA:2.40.50.140 103 182 6.1E-43 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 213 416 1.4E-18 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 SUPERFAMILY SSF52540 146 424 1.75E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 PANTHER PTHR15184 32 450 1.3E-171 T 23-04-2016 CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 SUPERFAMILY SSF68912 5 40 2.51E-6 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 TIGRFAM TIGR00767 rho: transcription termination factor Rho 5 472 1.0E-176 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 SMART SM00382 223 408 4.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 Gene3D G3DSA:3.40.50.300 187 471 7.7E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 SUPERFAMILY SSF50249 101 170 2.51E-6 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 Pfam PF07498 Rho termination factor, N-terminal domain 5 39 3.0E-11 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 Pfam PF07497 Rho termination factor, RNA-binding domain 109 181 1.0E-31 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 474 188.388 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CLI_RS00810 9cf36e9aa868a2b0546aa5f4fb35a3c2 481 PANTHER PTHR15184:SF34 32 450 1.3E-171 T 23-04-2016 CLI_RS16805 f0e173ddf2a5ea7f5f2abcc84f01bbe8 331 Gene3D G3DSA:3.40.50.720 118 300 3.6E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16805 f0e173ddf2a5ea7f5f2abcc84f01bbe8 331 SUPERFAMILY SSF51735 102 299 3.27E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16805 f0e173ddf2a5ea7f5f2abcc84f01bbe8 331 PANTHER PTHR10996 1 327 2.8E-141 T 23-04-2016 CLI_RS16805 f0e173ddf2a5ea7f5f2abcc84f01bbe8 331 Gene3D G3DSA:3.40.50.720 14 117 3.7E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16805 f0e173ddf2a5ea7f5f2abcc84f01bbe8 331 PANTHER PTHR10996:SF161 1 327 2.8E-141 T 23-04-2016 CLI_RS16805 f0e173ddf2a5ea7f5f2abcc84f01bbe8 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLI_RS16805 f0e173ddf2a5ea7f5f2abcc84f01bbe8 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 326 2.2E-28 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CLI_RS16805 f0e173ddf2a5ea7f5f2abcc84f01bbe8 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLI_RS16805 f0e173ddf2a5ea7f5f2abcc84f01bbe8 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 2.1E-53 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLI_RS16805 f0e173ddf2a5ea7f5f2abcc84f01bbe8 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 175 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLI_RS16805 f0e173ddf2a5ea7f5f2abcc84f01bbe8 331 SUPERFAMILY SSF52283 2 133 1.53E-35 T 23-04-2016 CLI_RS09490 e8fdcbe0395485c9cd5d176d10fd37ba 426 Gene3D G3DSA:3.40.640.10 7 288 4.5E-104 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS09490 e8fdcbe0395485c9cd5d176d10fd37ba 426 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 8 423 6.9E-182 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 CLI_RS09490 e8fdcbe0395485c9cd5d176d10fd37ba 426 PANTHER PTHR11808 267 426 5.8E-290 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS09490 e8fdcbe0395485c9cd5d176d10fd37ba 426 PANTHER PTHR11808 1 237 5.8E-290 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS09490 e8fdcbe0395485c9cd5d176d10fd37ba 426 SUPERFAMILY SSF53383 7 423 1.41E-109 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS09490 e8fdcbe0395485c9cd5d176d10fd37ba 426 PIRSF PIRSF001434 1 426 4.6E-122 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS09490 e8fdcbe0395485c9cd5d176d10fd37ba 426 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 423 7.7E-129 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS09490 e8fdcbe0395485c9cd5d176d10fd37ba 426 Gene3D G3DSA:3.90.1150.10 290 426 3.9E-47 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS09490 e8fdcbe0395485c9cd5d176d10fd37ba 426 PANTHER PTHR11808:SF37 267 426 5.8E-290 T 23-04-2016 CLI_RS09490 e8fdcbe0395485c9cd5d176d10fd37ba 426 PANTHER PTHR11808:SF37 1 237 5.8E-290 T 23-04-2016 CLI_RS15840 39656bcb9baf380e0b9b7ed7124a8575 81 PANTHER PTHR30024:SF8 1 80 3.4E-25 T 23-04-2016 CLI_RS15840 39656bcb9baf380e0b9b7ed7124a8575 81 PANTHER PTHR30024 1 80 3.4E-25 T 23-04-2016 CLI_RS11160 c1df462630a15c195c8bb98465702f9a 113 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 55 102 9.4E-6 T 23-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 ProSitePatterns PS00163 Fumarate lyases signature. 274 283 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 PANTHER PTHR11444 2 431 2.6E-222 T 23-04-2016 IPR000362 Fumarate lyase family CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 437 40.098 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 SUPERFAMILY SSF48557 3 430 3.46E-133 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 PANTHER PTHR11444:SF3 2 431 2.6E-222 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 PRINTS PR00145 Argininosuccinate lyase family signature 230 254 3.1E-61 T 23-04-2016 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 PRINTS PR00145 Argininosuccinate lyase family signature 141 161 3.1E-61 T 23-04-2016 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 PRINTS PR00145 Argininosuccinate lyase family signature 192 208 3.1E-61 T 23-04-2016 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 PRINTS PR00145 Argininosuccinate lyase family signature 309 328 3.1E-61 T 23-04-2016 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 PRINTS PR00145 Argininosuccinate lyase family signature 274 290 3.1E-61 T 23-04-2016 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 3.1E-61 T 23-04-2016 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 PRINTS PR00149 Fumarate lyase superfamily signature 230 257 1.4E-25 T 23-04-2016 IPR000362 Fumarate lyase family CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 PRINTS PR00149 Fumarate lyase superfamily signature 274 290 1.4E-25 T 23-04-2016 IPR000362 Fumarate lyase family CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 1.4E-25 T 23-04-2016 IPR000362 Fumarate lyase family CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 PRINTS PR00149 Fumarate lyase superfamily signature 146 164 1.4E-25 T 23-04-2016 IPR000362 Fumarate lyase family CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 Gene3D G3DSA:1.20.200.10 107 372 2.6E-94 T 23-04-2016 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 Gene3D G3DSA:1.10.275.10 1 106 3.2E-40 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 431 1.3E-179 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 Pfam PF14698 Argininosuccinate lyase C-terminal 362 430 8.8E-21 T 23-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 Gene3D G3DSA:1.10.40.30 373 430 8.4E-27 T 23-04-2016 CLI_RS13365 e441c3ee845ab74c4714ce33b7210415 440 Pfam PF00206 Lyase 6 299 1.2E-72 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal CLI_RS03655 951da8a933f0dd5e7793e20298ecde70 465 Pfam PF14199 Domain of unknown function (DUF4317) 1 461 9.3E-155 T 23-04-2016 IPR025466 Protein of unknown function DUF4317 CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 Gene3D G3DSA:3.30.565.10 466 617 7.0E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 PANTHER PTHR24423 347 621 1.0E-65 T 23-04-2016 CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 PANTHER PTHR24423 19 43 1.0E-65 T 23-04-2016 CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 Pfam PF00512 His Kinase A (phospho-acceptor) domain 414 479 3.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 PANTHER PTHR24423:SF526 347 621 1.0E-65 T 23-04-2016 CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 PANTHER PTHR24423:SF526 19 43 1.0E-65 T 23-04-2016 CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 592 3.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 567 3.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 617 3.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 Gene3D G3DSA:1.10.287.130 406 465 2.7E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 SMART SM00388 413 479 8.4E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 SUPERFAMILY SSF47384 402 480 4.9E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 SMART SM00387 527 636 3.7E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 528 621 1.7E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09725 4098d412bac2e5f73def0aba9591d4c9 637 SUPERFAMILY SSF55874 468 620 7.07E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01985 6e2356510d657949711ab4d85df1ed0e 224 PANTHER PTHR12677 1 223 2.1E-42 T 23-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 CLI_RS01985 6e2356510d657949711ab4d85df1ed0e 224 PANTHER PTHR12677:SF5 1 223 2.1E-42 T 23-04-2016 CLI_RS01985 6e2356510d657949711ab4d85df1ed0e 224 Pfam PF09335 SNARE associated Golgi protein 67 183 3.9E-31 T 23-04-2016 IPR032816 SNARE associated Golgi protein CLI_RS07735 e74d5e9ca48fce25c7ba713b02d612bf 340 PANTHER PTHR30073 10 340 1.7E-204 T 23-04-2016 CLI_RS07735 e74d5e9ca48fce25c7ba713b02d612bf 340 PIRSF PIRSF001555 12 340 8.1E-167 T 23-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 CLI_RS07735 e74d5e9ca48fce25c7ba713b02d612bf 340 Pfam PF03590 Aspartate-ammonia ligase 25 250 8.7E-113 T 23-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 CLI_RS07735 e74d5e9ca48fce25c7ba713b02d612bf 340 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 26 333 5.0E-122 T 23-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 CLI_RS07735 e74d5e9ca48fce25c7ba713b02d612bf 340 PANTHER PTHR30073:SF5 10 340 1.7E-204 T 23-04-2016 CLI_RS07735 e74d5e9ca48fce25c7ba713b02d612bf 340 Gene3D G3DSA:3.30.930.10 18 335 2.1E-162 T 23-04-2016 CLI_RS07735 e74d5e9ca48fce25c7ba713b02d612bf 340 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 16 336 51.956 T 23-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 CLI_RS07735 e74d5e9ca48fce25c7ba713b02d612bf 340 SUPERFAMILY SSF55681 20 333 1.45E-100 T 23-04-2016 CLI_RS05610 e018b31c0105391e321dd1a4270ac1b6 472 PANTHER PTHR13847 2 443 1.8E-145 T 23-04-2016 CLI_RS05610 e018b31c0105391e321dd1a4270ac1b6 472 Pfam PF04324 BFD-like [2Fe-2S] binding domain 398 452 2.5E-18 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain CLI_RS05610 e018b31c0105391e321dd1a4270ac1b6 472 Pfam PF01266 FAD dependent oxidoreductase 3 354 1.5E-63 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CLI_RS05610 e018b31c0105391e321dd1a4270ac1b6 472 PANTHER PTHR13847:SF150 2 443 1.8E-145 T 23-04-2016 CLI_RS05610 e018b31c0105391e321dd1a4270ac1b6 472 Gene3D G3DSA:3.50.50.60 137 217 3.2E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS05610 e018b31c0105391e321dd1a4270ac1b6 472 Gene3D G3DSA:3.50.50.60 1 82 3.2E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS05610 e018b31c0105391e321dd1a4270ac1b6 472 Gene3D G3DSA:3.50.50.60 315 371 3.2E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS05610 e018b31c0105391e321dd1a4270ac1b6 472 SUPERFAMILY SSF51905 1 218 2.94E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS05610 e018b31c0105391e321dd1a4270ac1b6 472 SUPERFAMILY SSF51905 315 406 2.94E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS14330 ad1651efbf7673122c3867e4e39c3e25 480 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 25 467 3.2E-167 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CLI_RS14330 ad1651efbf7673122c3867e4e39c3e25 480 SUPERFAMILY SSF56235 25 252 4.98E-69 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS14330 ad1651efbf7673122c3867e4e39c3e25 480 Gene3D G3DSA:3.40.50.2020 282 449 8.1E-49 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS14330 ad1651efbf7673122c3867e4e39c3e25 480 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 24 468 48.368 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CLI_RS14330 ad1651efbf7673122c3867e4e39c3e25 480 Gene3D G3DSA:3.60.20.10 25 269 2.3E-70 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS14330 ad1651efbf7673122c3867e4e39c3e25 480 PANTHER PTHR11907:SF0 22 480 5.3E-245 T 23-04-2016 CLI_RS14330 ad1651efbf7673122c3867e4e39c3e25 480 PIRSF PIRSF000485 21 480 1.7E-180 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CLI_RS14330 ad1651efbf7673122c3867e4e39c3e25 480 Pfam PF00156 Phosphoribosyl transferase domain 291 399 1.8E-11 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS14330 ad1651efbf7673122c3867e4e39c3e25 480 PANTHER PTHR11907 22 480 5.3E-245 T 23-04-2016 CLI_RS14330 ad1651efbf7673122c3867e4e39c3e25 480 SUPERFAMILY SSF53271 262 471 5.11E-73 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS14330 ad1651efbf7673122c3867e4e39c3e25 480 Pfam PF13537 Glutamine amidotransferase domain 105 224 1.6E-20 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain CLI_RS06425 d5cf0dffdb5f9a9815325206c7ad47c9 349 PANTHER PTHR40063 2 349 1.0E-109 T 23-04-2016 CLI_RS06425 d5cf0dffdb5f9a9815325206c7ad47c9 349 Pfam PF13303 Phosphotransferase system, EIIC 28 331 5.1E-56 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS15265 effe75f4cb3339725c5b9500ddffd87d 455 Gene3D G3DSA:3.20.20.70 94 425 1.6E-62 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS15265 effe75f4cb3339725c5b9500ddffd87d 455 PANTHER PTHR11228:SF21 44 445 1.2E-206 T 23-04-2016 CLI_RS15265 effe75f4cb3339725c5b9500ddffd87d 455 Pfam PF13353 4Fe-4S single cluster domain 101 219 4.1E-14 T 23-04-2016 CLI_RS15265 effe75f4cb3339725c5b9500ddffd87d 455 Pfam PF04055 Radical SAM superfamily 101 244 8.9E-12 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS15265 effe75f4cb3339725c5b9500ddffd87d 455 SUPERFAMILY SSF102114 94 416 4.71E-63 T 23-04-2016 CLI_RS15265 effe75f4cb3339725c5b9500ddffd87d 455 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 346 430 1.5E-21 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CLI_RS15265 effe75f4cb3339725c5b9500ddffd87d 455 Pfam PF13186 Iron-sulfur cluster-binding domain 346 407 6.9E-7 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CLI_RS15265 effe75f4cb3339725c5b9500ddffd87d 455 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 101 112 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CLI_RS15265 effe75f4cb3339725c5b9500ddffd87d 455 PANTHER PTHR11228 44 445 1.2E-206 T 23-04-2016 CLI_RS15265 effe75f4cb3339725c5b9500ddffd87d 455 TIGRFAM TIGR03974 rSAM_six_Cys: SCIFF radical SAM maturase 4 449 1.0E-205 T 23-04-2016 IPR024025 SCIFF radical SAM maturase CLI_RS03085 4b2a914815147c1d4f9f28d8d060a0ad 70 PANTHER PTHR10245:SF61 1 60 1.3E-20 T 23-04-2016 CLI_RS03085 4b2a914815147c1d4f9f28d8d060a0ad 70 PANTHER PTHR10245 1 60 1.3E-20 T 23-04-2016 CLI_RS03085 4b2a914815147c1d4f9f28d8d060a0ad 70 SUPERFAMILY SSF47413 2 62 7.78E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS03085 4b2a914815147c1d4f9f28d8d060a0ad 70 SMART SM00530 4 59 4.5E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS03085 4b2a914815147c1d4f9f28d8d060a0ad 70 Gene3D G3DSA:1.10.260.40 1 63 7.4E-23 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS03085 4b2a914815147c1d4f9f28d8d060a0ad 70 Pfam PF01381 Helix-turn-helix 5 59 3.7E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS18420 a5913b83ab4f4ce3a788970cb7d4e774 179 PANTHER PTHR23026 1 179 4.1E-52 T 23-04-2016 CLI_RS18420 a5913b83ab4f4ce3a788970cb7d4e774 179 Pfam PF00881 Nitroreductase family 5 157 3.8E-29 T 23-04-2016 IPR029479 Nitroreductase CLI_RS18420 a5913b83ab4f4ce3a788970cb7d4e774 179 Gene3D G3DSA:3.40.109.10 2 179 2.6E-58 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS18420 a5913b83ab4f4ce3a788970cb7d4e774 179 PANTHER PTHR23026:SF90 1 179 4.1E-52 T 23-04-2016 CLI_RS18420 a5913b83ab4f4ce3a788970cb7d4e774 179 SUPERFAMILY SSF55469 2 179 5.1E-54 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 SUPERFAMILY SSF56796 446 858 1.26E-125 T 23-04-2016 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 Gene3D G3DSA:3.40.309.10 307 402 5.3E-29 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 Gene3D G3DSA:3.40.309.10 224 271 5.3E-29 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 Gene3D G3DSA:3.40.605.10 4 223 1.1E-20 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 718 738 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 Pfam PF00171 Aldehyde dehydrogenase family 5 398 3.2E-23 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 SUPERFAMILY SSF53720 6 451 5.76E-78 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 PIRSF PIRSF000111 1 862 0.0 T 23-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 PANTHER PTHR11496:SF79 358 862 0.0 T 23-04-2016 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 Gene3D G3DSA:3.40.50.1970 448 641 6.9E-63 T 23-04-2016 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 Gene3D G3DSA:1.20.1090.10 642 858 5.8E-73 T 23-04-2016 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 Pfam PF00465 Iron-containing alcohol dehydrogenase 455 846 3.0E-116 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 630 658 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLI_RS01930 c9d27bd2373e89687a0afb7a126ca9e5 862 PANTHER PTHR11496 358 862 0.0 T 23-04-2016 CLI_RS07340 f0643d496df8739992cfff4747ad6d7d 511 Pfam PF03606 C4-dicarboxylate anaerobic carrier 15 507 1.0E-137 T 23-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CLI_RS07340 f0643d496df8739992cfff4747ad6d7d 511 PANTHER PTHR10283 53 510 3.8E-198 T 23-04-2016 CLI_RS07340 f0643d496df8739992cfff4747ad6d7d 511 PANTHER PTHR10283:SF90 53 510 3.8E-198 T 23-04-2016 CLI_RS02190 454cceed11608b9314eaa9bc4d6b3787 144 Pfam PF01475 Ferric uptake regulator family 9 126 2.6E-19 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CLI_RS02190 454cceed11608b9314eaa9bc4d6b3787 144 Gene3D G3DSA:1.10.10.10 4 71 4.2E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02190 454cceed11608b9314eaa9bc4d6b3787 144 PANTHER PTHR33202 4 135 7.3E-27 T 23-04-2016 CLI_RS02190 454cceed11608b9314eaa9bc4d6b3787 144 Gene3D G3DSA:3.90.10.10 72 135 5.7E-5 T 23-04-2016 CLI_RS02190 454cceed11608b9314eaa9bc4d6b3787 144 SUPERFAMILY SSF46785 4 132 2.54E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09785 d9459628f92cf2d31893b05b3f8dc1e1 146 SUPERFAMILY SSF55729 1 140 2.06E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS09785 d9459628f92cf2d31893b05b3f8dc1e1 146 PANTHER PTHR23091:SF274 1 144 6.0E-21 T 23-04-2016 CLI_RS09785 d9459628f92cf2d31893b05b3f8dc1e1 146 Pfam PF00583 Acetyltransferase (GNAT) family 51 129 5.1E-17 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS09785 d9459628f92cf2d31893b05b3f8dc1e1 146 Gene3D G3DSA:3.40.630.30 48 144 7.9E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS09785 d9459628f92cf2d31893b05b3f8dc1e1 146 PANTHER PTHR23091 1 144 6.0E-21 T 23-04-2016 CLI_RS09785 d9459628f92cf2d31893b05b3f8dc1e1 146 Gene3D G3DSA:1.10.287.900 1 38 1.7E-10 T 23-04-2016 IPR027455 Spermine/spermidine acetyltransferase, N-terminal domain KEGG: 00330+2.3.1.57|MetaCyc: PWY-0|MetaCyc: PWY-6117|UniPathway: UPA00188 CLI_RS02285 101a10796e47208545f4056edf3f2b22 284 Pfam PF02673 Bacitracin resistance protein BacA 7 271 5.6E-80 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CLI_RS02285 101a10796e47208545f4056edf3f2b22 284 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 269 6.9E-73 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CLI_RS02285 101a10796e47208545f4056edf3f2b22 284 PANTHER PTHR30622 1 284 4.6E-146 T 23-04-2016 CLI_RS02285 101a10796e47208545f4056edf3f2b22 284 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 276 18.086 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CLI_RS02285 101a10796e47208545f4056edf3f2b22 284 PANTHER PTHR30622:SF3 1 284 4.6E-146 T 23-04-2016 CLI_RS13815 a84b65d050d60a7c0f8190e8ae9dc06b 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 251 4.0E-61 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CLI_RS13815 a84b65d050d60a7c0f8190e8ae9dc06b 326 Gene3D G3DSA:3.90.25.10 170 221 8.8E-48 T 23-04-2016 CLI_RS13815 a84b65d050d60a7c0f8190e8ae9dc06b 326 Gene3D G3DSA:3.90.25.10 253 326 8.8E-48 T 23-04-2016 CLI_RS13815 a84b65d050d60a7c0f8190e8ae9dc06b 326 PANTHER PTHR10366 2 326 5.9E-128 T 23-04-2016 CLI_RS13815 a84b65d050d60a7c0f8190e8ae9dc06b 326 Gene3D G3DSA:3.40.50.720 3 169 1.1E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS13815 a84b65d050d60a7c0f8190e8ae9dc06b 326 PANTHER PTHR10366:SF186 2 326 5.9E-128 T 23-04-2016 CLI_RS13815 a84b65d050d60a7c0f8190e8ae9dc06b 326 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 325 1.5E-137 T 23-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 CLI_RS13815 a84b65d050d60a7c0f8190e8ae9dc06b 326 SUPERFAMILY SSF51735 3 325 5.53E-98 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS08075 347e7b203c642b56dc4764a38aa9f7d4 354 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 350 1.6E-95 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CLI_RS08075 347e7b203c642b56dc4764a38aa9f7d4 354 SUPERFAMILY SSF53383 5 350 9.14E-77 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS08075 347e7b203c642b56dc4764a38aa9f7d4 354 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 351 56.364 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CLI_RS08075 347e7b203c642b56dc4764a38aa9f7d4 354 Gene3D G3DSA:3.90.1150.10 254 352 3.8E-25 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS08075 347e7b203c642b56dc4764a38aa9f7d4 354 PANTHER PTHR11751:SF398 3 353 6.6E-130 T 23-04-2016 CLI_RS08075 347e7b203c642b56dc4764a38aa9f7d4 354 PANTHER PTHR11751 3 353 6.6E-130 T 23-04-2016 CLI_RS08075 347e7b203c642b56dc4764a38aa9f7d4 354 Gene3D G3DSA:3.40.640.10 38 253 1.2E-62 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS08075 347e7b203c642b56dc4764a38aa9f7d4 354 Pfam PF00155 Aminotransferase class I and II 25 347 1.7E-55 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS08075 347e7b203c642b56dc4764a38aa9f7d4 354 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CLI_RS15775 7e750e85ab9622de5dd12b18acd84edc 294 Gene3D G3DSA:2.130.10.10 48 291 1.7E-30 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CLI_RS15775 7e750e85ab9622de5dd12b18acd84edc 294 PANTHER PTHR13833:SF53 43 252 9.7E-27 T 23-04-2016 CLI_RS15775 7e750e85ab9622de5dd12b18acd84edc 294 PANTHER PTHR13833 43 252 9.7E-27 T 23-04-2016 CLI_RS15775 7e750e85ab9622de5dd12b18acd84edc 294 SUPERFAMILY SSF50969 5 285 1.41E-30 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CLI_RS17785 a7f4d505e877e1bf091ee989ba8bccc1 105 Gene3D G3DSA:2.30.30.30 2 93 4.7E-24 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CLI_RS17785 a7f4d505e877e1bf091ee989ba8bccc1 105 Pfam PF00467 KOW motif 8 39 2.5E-7 T 23-04-2016 IPR005824 KOW CLI_RS17785 a7f4d505e877e1bf091ee989ba8bccc1 105 SUPERFAMILY SSF50104 2 103 3.84E-36 T 23-04-2016 IPR008991 Translation protein SH3-like domain CLI_RS17785 a7f4d505e877e1bf091ee989ba8bccc1 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 104 3.7E-39 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17785 a7f4d505e877e1bf091ee989ba8bccc1 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 99 19.971 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17785 a7f4d505e877e1bf091ee989ba8bccc1 105 SMART SM00739 5 32 5.1E-6 T 23-04-2016 IPR005824 KOW CLI_RS17785 a7f4d505e877e1bf091ee989ba8bccc1 105 PANTHER PTHR12903 1 103 2.6E-47 T 23-04-2016 CLI_RS17785 a7f4d505e877e1bf091ee989ba8bccc1 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 104 3.2E-28 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS04090 5f173abb3aacdd1cd9d476ca86b16369 307 Gene3D G3DSA:3.20.20.80 2 196 1.0E-55 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS04090 5f173abb3aacdd1cd9d476ca86b16369 307 Gene3D G3DSA:1.10.101.10 245 307 2.2E-17 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS04090 5f173abb3aacdd1cd9d476ca86b16369 307 PANTHER PTHR34135 1 207 8.3E-32 T 23-04-2016 CLI_RS04090 5f173abb3aacdd1cd9d476ca86b16369 307 SUPERFAMILY SSF51445 3 202 5.05E-48 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS04090 5f173abb3aacdd1cd9d476ca86b16369 307 Pfam PF01183 Glycosyl hydrolases family 25 5 182 1.4E-29 T 23-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 CLI_RS04090 5f173abb3aacdd1cd9d476ca86b16369 307 SUPERFAMILY SSF47090 241 307 7.85E-16 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS04090 5f173abb3aacdd1cd9d476ca86b16369 307 PANTHER PTHR34135:SF2 1 207 8.3E-32 T 23-04-2016 CLI_RS04090 5f173abb3aacdd1cd9d476ca86b16369 307 Pfam PF01471 Putative peptidoglycan binding domain 258 307 3.3E-11 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS04090 5f173abb3aacdd1cd9d476ca86b16369 307 SMART SM00641 2 109 2.4E-4 T 23-04-2016 IPR018077 Glycoside hydrolase, family 25 subgroup CLI_RS16855 2efba75f3a8787a796428f96b70f4faf 440 PANTHER PTHR30588:SF0 2 436 2.3E-198 T 23-04-2016 CLI_RS16855 2efba75f3a8787a796428f96b70f4faf 440 Pfam PF05525 Branched-chain amino acid transport protein 7 425 1.6E-111 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CLI_RS16855 2efba75f3a8787a796428f96b70f4faf 440 PANTHER PTHR30588 2 436 2.3E-198 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CLI_RS16855 2efba75f3a8787a796428f96b70f4faf 440 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 412 1.1E-96 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CLI_RS01710 df77406bbe767c7cf4ca5124ea89e588 139 PANTHER PTHR38459 2 139 4.8E-32 T 23-04-2016 CLI_RS01710 df77406bbe767c7cf4ca5124ea89e588 139 Pfam PF04138 GtrA-like protein 21 138 1.4E-25 T 23-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CLI_RS01710 df77406bbe767c7cf4ca5124ea89e588 139 PANTHER PTHR38459:SF1 2 139 4.8E-32 T 23-04-2016 CLI_RS04510 523909d94db5e370fdf047e64d340e46 174 Gene3D G3DSA:3.40.630.30 38 157 3.0E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04510 523909d94db5e370fdf047e64d340e46 174 SUPERFAMILY SSF55729 40 174 1.11E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04510 523909d94db5e370fdf047e64d340e46 174 Pfam PF13673 Acetyltransferase (GNAT) domain 59 155 4.5E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS06995 911d58b08e91f8b20125a54761aaec64 253 SUPERFAMILY SSF52540 4 229 1.97E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06995 911d58b08e91f8b20125a54761aaec64 253 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS06995 911d58b08e91f8b20125a54761aaec64 253 Pfam PF00005 ABC transporter 19 167 3.6E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS06995 911d58b08e91f8b20125a54761aaec64 253 Gene3D G3DSA:3.40.50.300 4 239 1.0E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06995 911d58b08e91f8b20125a54761aaec64 253 PANTHER PTHR24220:SF309 5 243 4.3E-98 T 23-04-2016 CLI_RS06995 911d58b08e91f8b20125a54761aaec64 253 PANTHER PTHR24220 5 243 4.3E-98 T 23-04-2016 CLI_RS06995 911d58b08e91f8b20125a54761aaec64 253 SMART SM00382 28 216 3.4E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS11025 826ad760dfbf0dd440d20e84ddd3bfdc 329 PANTHER PTHR35527 1 329 9.8E-138 T 23-04-2016 CLI_RS11025 826ad760dfbf0dd440d20e84ddd3bfdc 329 PANTHER PTHR35527:SF1 1 329 9.8E-138 T 23-04-2016 CLI_RS11025 826ad760dfbf0dd440d20e84ddd3bfdc 329 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 312 6.8E-118 T 23-04-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal CLI_RS11025 826ad760dfbf0dd440d20e84ddd3bfdc 329 SUPERFAMILY SSF56235 2 328 2.93E-112 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS11025 826ad760dfbf0dd440d20e84ddd3bfdc 329 Gene3D G3DSA:3.60.60.10 2 329 8.2E-117 T 23-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 CLI_RS07165 4734ec9a0b906eda1d1a9c1fe7571364 346 Hamap MF_01818 Ribonuclease BN [rbn]. 2 342 31.846 T 23-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 CLI_RS07165 4734ec9a0b906eda1d1a9c1fe7571364 346 Pfam PF00753 Metallo-beta-lactamase superfamily 21 89 3.8E-11 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS07165 4734ec9a0b906eda1d1a9c1fe7571364 346 SUPERFAMILY SSF56281 4 112 4.72E-58 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS07165 4734ec9a0b906eda1d1a9c1fe7571364 346 SUPERFAMILY SSF56281 160 342 4.72E-58 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS07165 4734ec9a0b906eda1d1a9c1fe7571364 346 PANTHER PTHR12553 3 193 6.9E-65 T 23-04-2016 CLI_RS07165 4734ec9a0b906eda1d1a9c1fe7571364 346 PANTHER PTHR12553 226 336 6.9E-65 T 23-04-2016 CLI_RS07165 4734ec9a0b906eda1d1a9c1fe7571364 346 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 4 339 7.6E-91 T 23-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 CLI_RS07165 4734ec9a0b906eda1d1a9c1fe7571364 346 Gene3D G3DSA:3.60.15.10 6 116 9.6E-63 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS07165 4734ec9a0b906eda1d1a9c1fe7571364 346 Gene3D G3DSA:3.60.15.10 154 342 9.6E-63 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS11405 1a5e368ea0e2d180d7b96d9eda13b7c8 149 PANTHER PTHR10173:SF31 9 149 3.6E-56 T 23-04-2016 CLI_RS11405 1a5e368ea0e2d180d7b96d9eda13b7c8 149 PANTHER PTHR10173 9 149 3.6E-56 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 CLI_RS11405 1a5e368ea0e2d180d7b96d9eda13b7c8 149 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 6 133 36.23 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CLI_RS11405 1a5e368ea0e2d180d7b96d9eda13b7c8 149 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 7 141 7.7E-63 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CLI_RS11405 1a5e368ea0e2d180d7b96d9eda13b7c8 149 SUPERFAMILY SSF51316 6 148 4.45E-59 T 23-04-2016 IPR011057 Mss4-like CLI_RS11405 1a5e368ea0e2d180d7b96d9eda13b7c8 149 Gene3D G3DSA:2.170.150.20 3 148 6.5E-61 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CLI_RS11405 1a5e368ea0e2d180d7b96d9eda13b7c8 149 Pfam PF01641 SelR domain 12 132 6.9E-48 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CLI_RS14910 df2e73709f9e9dee18cc7c0da8d5e402 265 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 207 4.4E-30 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS14910 df2e73709f9e9dee18cc7c0da8d5e402 265 SUPERFAMILY SSF52540 1 261 4.07E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14910 df2e73709f9e9dee18cc7c0da8d5e402 265 PANTHER PTHR13696 1 249 5.3E-84 T 23-04-2016 CLI_RS14910 df2e73709f9e9dee18cc7c0da8d5e402 265 PIRSF PIRSF003092 1 265 1.2E-85 T 23-04-2016 IPR025501 ATP binding protein MinD CLI_RS14910 df2e73709f9e9dee18cc7c0da8d5e402 265 Gene3D G3DSA:3.40.50.300 1 238 4.6E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14910 df2e73709f9e9dee18cc7c0da8d5e402 265 PANTHER PTHR13696:SF1 1 249 5.3E-84 T 23-04-2016 CLI_RS14910 df2e73709f9e9dee18cc7c0da8d5e402 265 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 262 1.9E-120 T 23-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 CLI_RS00935 6fed09181abea5880a35ad5d4668b20e 418 PANTHER PTHR21090 1 417 3.8E-273 T 23-04-2016 CLI_RS00935 6fed09181abea5880a35ad5d4668b20e 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 8.5E-169 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS00935 6fed09181abea5880a35ad5d4668b20e 418 Gene3D G3DSA:3.65.10.10 21 220 1.2E-56 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CLI_RS00935 6fed09181abea5880a35ad5d4668b20e 418 SUPERFAMILY SSF55205 1 417 3.6E-134 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CLI_RS00935 6fed09181abea5880a35ad5d4668b20e 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.165 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS00935 6fed09181abea5880a35ad5d4668b20e 418 Gene3D G3DSA:3.65.10.10 221 417 3.8E-63 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CLI_RS00935 6fed09181abea5880a35ad5d4668b20e 418 PANTHER PTHR21090:SF19 1 417 3.8E-273 T 23-04-2016 CLI_RS00935 6fed09181abea5880a35ad5d4668b20e 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 7.2E-101 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CLI_RS05555 0392c450174f7d23c4bb7929f66eec11 355 ProSitePatterns PS01095 Chitinases family 18 active site. 139 147 - T 23-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 CLI_RS05555 0392c450174f7d23c4bb7929f66eec11 355 PANTHER PTHR11177:SF195 286 355 1.4E-163 T 23-04-2016 CLI_RS05555 0392c450174f7d23c4bb7929f66eec11 355 Gene3D G3DSA:3.20.20.80 32 349 5.9E-69 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS05555 0392c450174f7d23c4bb7929f66eec11 355 PANTHER PTHR11177 7 237 1.4E-163 T 23-04-2016 CLI_RS05555 0392c450174f7d23c4bb7929f66eec11 355 PANTHER PTHR11177 286 355 1.4E-163 T 23-04-2016 CLI_RS05555 0392c450174f7d23c4bb7929f66eec11 355 PANTHER PTHR11177:SF195 7 237 1.4E-163 T 23-04-2016 CLI_RS05555 0392c450174f7d23c4bb7929f66eec11 355 SMART SM00636 36 340 6.7E-7 T 23-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 CLI_RS05555 0392c450174f7d23c4bb7929f66eec11 355 SUPERFAMILY SSF51445 33 349 1.48E-57 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS05555 0392c450174f7d23c4bb7929f66eec11 355 Pfam PF00704 Glycosyl hydrolases family 18 38 340 1.4E-29 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 CLI_RS05575 62b4447cd85baba6602e1adb31fdd2c8 194 PANTHER PTHR37171 1 190 1.5E-31 T 23-04-2016 CLI_RS05575 62b4447cd85baba6602e1adb31fdd2c8 194 PANTHER PTHR37171:SF1 1 190 1.5E-31 T 23-04-2016 CLI_RS05575 62b4447cd85baba6602e1adb31fdd2c8 194 SUPERFAMILY SSF56112 20 140 2.08E-13 T 23-04-2016 IPR011009 Protein kinase-like domain CLI_RS05575 62b4447cd85baba6602e1adb31fdd2c8 194 Gene3D G3DSA:3.30.200.20 18 102 1.6E-5 T 23-04-2016 CLI_RS07390 ffc86c8524eb6dc06182b5a42f6df0f8 317 SUPERFAMILY SSF55174 11 59 1.31E-5 T 23-04-2016 CLI_RS07390 ffc86c8524eb6dc06182b5a42f6df0f8 317 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS07390 ffc86c8524eb6dc06182b5a42f6df0f8 317 PANTHER PTHR11079:SF83 80 294 2.5E-174 T 23-04-2016 CLI_RS07390 ffc86c8524eb6dc06182b5a42f6df0f8 317 PANTHER PTHR11079:SF83 1 62 2.5E-174 T 23-04-2016 CLI_RS07390 ffc86c8524eb6dc06182b5a42f6df0f8 317 Pfam PF01479 S4 domain 12 58 1.6E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS07390 ffc86c8524eb6dc06182b5a42f6df0f8 317 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 8 295 2.6E-59 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS07390 ffc86c8524eb6dc06182b5a42f6df0f8 317 Pfam PF00849 RNA pseudouridylate synthase 87 246 4.7E-27 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS07390 ffc86c8524eb6dc06182b5a42f6df0f8 317 SMART SM00363 12 95 0.0016 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS07390 ffc86c8524eb6dc06182b5a42f6df0f8 317 Gene3D G3DSA:3.10.290.10 12 59 0.001 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS07390 ffc86c8524eb6dc06182b5a42f6df0f8 317 SUPERFAMILY SSF55120 73 292 3.08E-47 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS07390 ffc86c8524eb6dc06182b5a42f6df0f8 317 PANTHER PTHR11079 80 294 2.5E-174 T 23-04-2016 CLI_RS07390 ffc86c8524eb6dc06182b5a42f6df0f8 317 PANTHER PTHR11079 1 62 2.5E-174 T 23-04-2016 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 17 27 - T 23-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 Gene3D G3DSA:3.40.50.1260 5 183 8.6E-74 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 PANTHER PTHR11406 4 398 9.4E-233 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 7 397 42.875 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 317 342 2.4E-95 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 12 28 2.4E-95 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 172 194 2.4E-95 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 33 55 2.4E-95 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 373 390 2.4E-95 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 141 163 2.4E-95 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 195 214 2.4E-95 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 113 128 2.4E-95 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 2.4E-95 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 SUPERFAMILY SSF53748 4 398 3.53E-160 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 PIRSF PIRSF000724 1 398 3.4E-154 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 Pfam PF00162 Phosphoglycerate kinase 8 387 4.2E-165 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS01300 ea557ac12a8429279745689f2ac0e13f 398 Gene3D G3DSA:3.40.50.1270 184 385 3.4E-89 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CLI_RS06000 5241af79b498a329c86ebbb19198204a 562 SUPERFAMILY SSF161098 22 275 8.5E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06000 5241af79b498a329c86ebbb19198204a 562 Gene3D G3DSA:1.10.3720.10 301 543 1.2E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06000 5241af79b498a329c86ebbb19198204a 562 PANTHER PTHR30193:SF10 1 284 8.9E-95 T 23-04-2016 CLI_RS06000 5241af79b498a329c86ebbb19198204a 562 SUPERFAMILY SSF161098 301 553 2.62E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06000 5241af79b498a329c86ebbb19198204a 562 Gene3D G3DSA:1.10.3720.10 22 276 1.9E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06000 5241af79b498a329c86ebbb19198204a 562 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 272 2.4E-9 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06000 5241af79b498a329c86ebbb19198204a 562 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 367 542 1.0E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06000 5241af79b498a329c86ebbb19198204a 562 PANTHER PTHR30193 1 284 8.9E-95 T 23-04-2016 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 Gene3D G3DSA:1.10.390.10 432 589 2.7E-50 T 23-04-2016 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 85 133 6.4E-8 T 23-04-2016 IPR011096 FTP domain CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 SUPERFAMILY SSF55486 262 589 8.42E-76 T 23-04-2016 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 PANTHER PTHR33794 325 596 2.8E-211 T 23-04-2016 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 PANTHER PTHR33794 2 308 2.8E-211 T 23-04-2016 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 PANTHER PTHR33794:SF1 325 596 2.8E-211 T 23-04-2016 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 PANTHER PTHR33794:SF1 2 308 2.8E-211 T 23-04-2016 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 264 427 5.9E-44 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 Pfam PF03413 Peptidase propeptide and YPEB domain 148 212 8.3E-9 T 23-04-2016 IPR025711 PepSY domain CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 430 589 4.2E-50 T 23-04-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 Gene3D G3DSA:3.10.170.10 263 430 1.2E-45 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 380 400 7.3E-20 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 418 434 7.3E-20 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 439 450 7.3E-20 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07445 ae30c68072b7c4ba15efeab984539589 597 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 507 523 7.3E-20 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS06295 4336f5e81563542c5126e2ef1c967ba0 224 Pfam PF01842 ACT domain 151 211 3.8E-10 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CLI_RS06295 4336f5e81563542c5126e2ef1c967ba0 224 Gene3D G3DSA:3.30.1330.90 13 136 1.5E-29 T 23-04-2016 IPR029009 Allosteric substrate binding domain CLI_RS06295 4336f5e81563542c5126e2ef1c967ba0 224 Gene3D G3DSA:3.30.70.260 137 220 4.2E-19 T 23-04-2016 CLI_RS06295 4336f5e81563542c5126e2ef1c967ba0 224 SUPERFAMILY SSF55021 140 220 1.13E-17 T 23-04-2016 CLI_RS06295 4336f5e81563542c5126e2ef1c967ba0 224 PANTHER PTHR30182 1 223 5.0E-116 T 23-04-2016 CLI_RS06295 4336f5e81563542c5126e2ef1c967ba0 224 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 208 1.5E-71 T 23-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 CLI_RS06295 4336f5e81563542c5126e2ef1c967ba0 224 PANTHER PTHR30182:SF2 1 223 5.0E-116 T 23-04-2016 CLI_RS06295 4336f5e81563542c5126e2ef1c967ba0 224 PIRSF PIRSF036692 1 222 3.2E-93 T 23-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 CLI_RS06295 4336f5e81563542c5126e2ef1c967ba0 224 SUPERFAMILY SSF143548 19 138 8.89E-32 T 23-04-2016 IPR029009 Allosteric substrate binding domain CLI_RS06295 4336f5e81563542c5126e2ef1c967ba0 224 Pfam PF03315 Serine dehydratase beta chain 5 75 6.5E-13 T 23-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 CLI_RS10745 aad5a573a445902cc494fbe51bff4ae5 663 PANTHER PTHR30489:SF14 1 663 3.1E-88 T 23-04-2016 CLI_RS10745 aad5a573a445902cc494fbe51bff4ae5 663 PIRSF PIRSF018968 1 663 1.2E-72 T 23-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 CLI_RS10745 aad5a573a445902cc494fbe51bff4ae5 663 PANTHER PTHR30489 1 663 3.1E-88 T 23-04-2016 CLI_RS10745 aad5a573a445902cc494fbe51bff4ae5 663 Pfam PF02687 FtsX-like permease family 546 643 1.5E-7 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS10745 aad5a573a445902cc494fbe51bff4ae5 663 Pfam PF02687 FtsX-like permease family 64 184 6.1E-13 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS18805 2b06bf563535aed8e942b7f651dc9d51 254 Pfam PF13614 AAA domain 2 179 5.8E-69 T 23-04-2016 IPR025669 AAA domain CLI_RS18805 2b06bf563535aed8e942b7f651dc9d51 254 PANTHER PTHR13696:SF52 2 254 1.8E-89 T 23-04-2016 CLI_RS18805 2b06bf563535aed8e942b7f651dc9d51 254 PANTHER PTHR13696 2 254 1.8E-89 T 23-04-2016 CLI_RS18805 2b06bf563535aed8e942b7f651dc9d51 254 Gene3D G3DSA:3.40.50.300 2 253 1.8E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18805 2b06bf563535aed8e942b7f651dc9d51 254 SUPERFAMILY SSF52540 2 252 8.25E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18595 b12d5864975b6879cdaf9ff229fea8bd 311 PANTHER PTHR21666 131 310 1.0E-48 T 23-04-2016 CLI_RS18595 b12d5864975b6879cdaf9ff229fea8bd 311 SUPERFAMILY SSF51261 113 310 1.83E-54 T 23-04-2016 IPR011055 Duplicated hybrid motif CLI_RS18595 b12d5864975b6879cdaf9ff229fea8bd 311 Gene3D G3DSA:2.70.70.10 179 311 3.4E-49 T 23-04-2016 CLI_RS18595 b12d5864975b6879cdaf9ff229fea8bd 311 Pfam PF01551 Peptidase family M23 212 306 5.9E-36 T 23-04-2016 IPR016047 Peptidase M23 CLI_RS13820 4e62c0e0195ca44caca9f9ccf840dad7 138 Gene3D G3DSA:3.40.50.360 4 138 1.0E-43 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS13820 4e62c0e0195ca44caca9f9ccf840dad7 138 PANTHER PTHR32145:SF19 1 138 4.4E-76 T 23-04-2016 CLI_RS13820 4e62c0e0195ca44caca9f9ccf840dad7 138 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLI_RS13820 4e62c0e0195ca44caca9f9ccf840dad7 138 Pfam PF00258 Flavodoxin 6 130 2.8E-17 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLI_RS13820 4e62c0e0195ca44caca9f9ccf840dad7 138 SUPERFAMILY SSF52218 3 137 1.59E-35 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS13820 4e62c0e0195ca44caca9f9ccf840dad7 138 TIGRFAM TIGR01753 flav_short: flavodoxin 4 138 1.0E-45 T 23-04-2016 IPR010087 Flavodoxin, short chain GO:0010181 CLI_RS13820 4e62c0e0195ca44caca9f9ccf840dad7 138 PANTHER PTHR32145 1 138 4.4E-76 T 23-04-2016 CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 SUPERFAMILY SSF46689 57 108 4.48E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 SMART SM00342 21 104 9.8E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 PANTHER PTHR11019 2 112 8.7E-50 T 23-04-2016 CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 Gene3D G3DSA:1.10.10.60 58 118 1.0E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 Pfam PF12833 Helix-turn-helix domain 27 105 2.2E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 PANTHER PTHR11019:SF56 2 112 8.7E-50 T 23-04-2016 CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 Pfam PF14526 Integron-associated effector binding protein 131 282 3.6E-23 T 23-04-2016 IPR029441 Integron-associated effector binding protein CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 SUPERFAMILY SSF46689 7 56 4.3E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 Gene3D G3DSA:3.20.80.10 126 284 8.9E-26 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 Gene3D G3DSA:1.10.10.60 1 57 4.6E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.0E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.0E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 SUPERFAMILY SSF55136 128 285 2.62E-24 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS04155 def04ba5fda0bb8aa8b1f0d4f8a34c88 285 SMART SM00871 128 283 8.6E-27 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding CLI_RS17755 0410bc51f8b24844f239e1962a7c9fa9 165 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site CLI_RS17755 0410bc51f8b24844f239e1962a7c9fa9 165 Pfam PF03719 Ribosomal protein S5, C-terminal domain 86 156 3.4E-30 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CLI_RS17755 0410bc51f8b24844f239e1962a7c9fa9 165 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 73 1.5E-30 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS17755 0410bc51f8b24844f239e1962a7c9fa9 165 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 162 9.0E-63 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLI_RS17755 0410bc51f8b24844f239e1962a7c9fa9 165 Gene3D G3DSA:3.30.230.10 77 158 3.5E-32 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS17755 0410bc51f8b24844f239e1962a7c9fa9 165 SUPERFAMILY SSF54211 79 158 1.69E-25 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS17755 0410bc51f8b24844f239e1962a7c9fa9 165 PANTHER PTHR13718 9 163 2.0E-71 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 CLI_RS17755 0410bc51f8b24844f239e1962a7c9fa9 165 Gene3D G3DSA:3.30.160.20 9 71 3.5E-31 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CLI_RS17755 0410bc51f8b24844f239e1962a7c9fa9 165 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 33.14 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLI_RS17755 0410bc51f8b24844f239e1962a7c9fa9 165 SUPERFAMILY SSF54768 7 74 1.67E-23 T 23-04-2016 CLI_RS06550 03c4bf9014352e867442b39c4c3f2996 512 PIRSF PIRSF037559 1 512 1.1E-274 T 23-04-2016 IPR017236 Glycine/sarcosine/betaine reductase, component C, beta CLI_RS06550 03c4bf9014352e867442b39c4c3f2996 512 SUPERFAMILY SSF53901 184 291 1.94E-12 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS06550 03c4bf9014352e867442b39c4c3f2996 512 Gene3D G3DSA:3.40.47.10 191 293 5.8E-20 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS06550 03c4bf9014352e867442b39c4c3f2996 512 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 255 333 3.7E-8 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CLI_RS01230 ac4fa33d877c782cedeaba3bf1eaf58d 344 SUPERFAMILY SSF101821 74 187 1.31E-26 T 23-04-2016 CLI_RS01230 ac4fa33d877c782cedeaba3bf1eaf58d 344 SUPERFAMILY SSF53187 175 343 3.49E-54 T 23-04-2016 CLI_RS01230 ac4fa33d877c782cedeaba3bf1eaf58d 344 SUPERFAMILY SSF53187 8 79 3.49E-54 T 23-04-2016 CLI_RS01230 ac4fa33d877c782cedeaba3bf1eaf58d 344 Gene3D G3DSA:3.40.630.10 171 343 3.3E-60 T 23-04-2016 CLI_RS01230 ac4fa33d877c782cedeaba3bf1eaf58d 344 Gene3D G3DSA:3.40.630.10 3 73 3.3E-60 T 23-04-2016 CLI_RS01230 ac4fa33d877c782cedeaba3bf1eaf58d 344 PIRSF PIRSF001123 5 344 1.3E-37 T 23-04-2016 IPR008007 Peptidase M42 CLI_RS01230 ac4fa33d877c782cedeaba3bf1eaf58d 344 PANTHER PTHR32481 3 344 1.7E-198 T 23-04-2016 CLI_RS01230 ac4fa33d877c782cedeaba3bf1eaf58d 344 Pfam PF05343 M42 glutamyl aminopeptidase 49 337 9.6E-79 T 23-04-2016 IPR008007 Peptidase M42 CLI_RS01230 ac4fa33d877c782cedeaba3bf1eaf58d 344 Gene3D G3DSA:2.40.30.40 74 170 5.8E-28 T 23-04-2016 IPR023367 Peptidase M42, domain 2 CLI_RS01230 ac4fa33d877c782cedeaba3bf1eaf58d 344 PANTHER PTHR32481:SF7 3 344 1.7E-198 T 23-04-2016 CLI_RS16880 4b36266e206ebecb4f641329fd86800e 95 SMART SM00883 2 93 6.1E-51 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLI_RS16880 4b36266e206ebecb4f641329fd86800e 95 PANTHER PTHR10772 1 94 9.1E-42 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLI_RS16880 4b36266e206ebecb4f641329fd86800e 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 94 25.93 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLI_RS16880 4b36266e206ebecb4f641329fd86800e 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 23-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CLI_RS16880 4b36266e206ebecb4f641329fd86800e 95 PRINTS PR00297 10kDa chaperonin signature 80 93 1.1E-31 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLI_RS16880 4b36266e206ebecb4f641329fd86800e 95 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-31 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLI_RS16880 4b36266e206ebecb4f641329fd86800e 95 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-31 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLI_RS16880 4b36266e206ebecb4f641329fd86800e 95 PRINTS PR00297 10kDa chaperonin signature 59 71 1.1E-31 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLI_RS16880 4b36266e206ebecb4f641329fd86800e 95 SUPERFAMILY SSF50129 1 94 8.67E-33 T 23-04-2016 IPR011032 GroES-like CLI_RS16880 4b36266e206ebecb4f641329fd86800e 95 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 1.6E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLI_RS16880 4b36266e206ebecb4f641329fd86800e 95 Gene3D G3DSA:2.30.33.40 1 94 2.7E-35 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLI_RS13615 ceac2d83b7624f96bdfb16c99db84d11 320 Pfam PF00700 Bacterial flagellin C-terminal helical region 237 319 1.5E-9 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS13615 ceac2d83b7624f96bdfb16c99db84d11 320 PANTHER PTHR30244 2 320 4.8E-81 T 23-04-2016 CLI_RS13615 ceac2d83b7624f96bdfb16c99db84d11 320 Gene3D G3DSA:1.20.1330.10 56 167 4.4E-27 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS13615 ceac2d83b7624f96bdfb16c99db84d11 320 Gene3D G3DSA:1.20.1330.10 220 276 4.4E-27 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS13615 ceac2d83b7624f96bdfb16c99db84d11 320 PANTHER PTHR30244:SF5 2 320 4.8E-81 T 23-04-2016 CLI_RS13615 ceac2d83b7624f96bdfb16c99db84d11 320 SUPERFAMILY SSF64518 2 320 2.09E-62 T 23-04-2016 CLI_RS13615 ceac2d83b7624f96bdfb16c99db84d11 320 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 138 5.3E-22 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS13615 ceac2d83b7624f96bdfb16c99db84d11 320 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 199 2.0E-43 T 23-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 CLI_RS17915 ab3c1111477793c4ca002fc2433e5430 49 PANTHER PTHR15238 1 49 3.9E-22 T 23-04-2016 CLI_RS17915 ab3c1111477793c4ca002fc2433e5430 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 23-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17915 ab3c1111477793c4ca002fc2433e5430 49 SUPERFAMILY SSF57829 1 49 3.66E-20 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 CLI_RS17915 ab3c1111477793c4ca002fc2433e5430 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 49 1.8E-21 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17915 ab3c1111477793c4ca002fc2433e5430 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 19.67 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17915 ab3c1111477793c4ca002fc2433e5430 49 Pfam PF00471 Ribosomal protein L33 3 49 1.9E-23 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17915 ab3c1111477793c4ca002fc2433e5430 49 PANTHER PTHR15238:SF3 1 49 3.9E-22 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 Pfam PF00702 haloacid dehalogenase-like hydrolase 316 589 1.3E-25 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 319 333 7.7E-38 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 474 485 7.7E-38 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 150 164 7.7E-38 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 599 611 7.7E-38 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 496 506 7.7E-38 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 594 7.7E-38 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 SMART SM00831 2 65 2.4E-7 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 PANTHER PTHR24093 10 843 2.2E-204 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 Gene3D G3DSA:1.20.1110.10 544 837 1.4E-83 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 Gene3D G3DSA:1.20.1110.10 45 97 1.4E-83 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 Gene3D G3DSA:3.40.1110.10 309 336 1.1E-9 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 SUPERFAMILY SSF56784 317 337 4.88E-53 T 23-04-2016 IPR023214 HAD-like domain CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 SUPERFAMILY SSF56784 430 655 4.88E-53 T 23-04-2016 IPR023214 HAD-like domain CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 520 9.2E-49 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 542 653 1.5E-30 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 Pfam PF00690 Cation transporter/ATPase, N-terminus 9 59 5.6E-12 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 PANTHER PTHR24093:SF268 10 843 2.2E-204 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 SUPERFAMILY SSF81665 10 103 2.88E-94 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 SUPERFAMILY SSF81665 625 840 2.88E-94 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 SUPERFAMILY SSF81665 214 313 2.88E-94 T 23-04-2016 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 321 327 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 Gene3D G3DSA:3.40.1110.10 337 478 4.8E-20 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 Pfam PF00689 Cation transporting ATPase, C-terminus 663 835 1.7E-29 T 23-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 Gene3D G3DSA:2.70.150.10 98 210 3.4E-35 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 Gene3D G3DSA:2.70.150.10 10 44 3.4E-35 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 Pfam PF00122 E1-E2 ATPase 71 310 1.0E-56 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 607 632 1.3E-19 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 433 451 1.3E-19 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 575 591 1.3E-19 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 547 563 1.3E-19 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CLI_RS07890 3eba09bce498ec8894ae002b9f7647f9 844 SUPERFAMILY SSF81653 103 210 7.19E-27 T 23-04-2016 CLI_RS01340 af36a1a60d011fb87982ee3c573c84d9 387 PANTHER PTHR11958 1 386 3.0E-210 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS01340 af36a1a60d011fb87982ee3c573c84d9 387 PANTHER PTHR11958:SF53 1 386 3.0E-210 T 23-04-2016 CLI_RS01340 af36a1a60d011fb87982ee3c573c84d9 387 Gene3D G3DSA:1.10.3860.10 3 385 6.6E-53 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS01340 af36a1a60d011fb87982ee3c573c84d9 387 SUPERFAMILY SSF118215 8 378 5.62E-69 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS01340 af36a1a60d011fb87982ee3c573c84d9 387 Pfam PF00375 Sodium:dicarboxylate symporter family 8 378 8.4E-72 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS01340 af36a1a60d011fb87982ee3c573c84d9 387 PRINTS PR00173 Glutamate-aspartate symporter signature 271 297 2.2E-6 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS01340 af36a1a60d011fb87982ee3c573c84d9 387 PRINTS PR00173 Glutamate-aspartate symporter signature 43 63 2.2E-6 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS01340 af36a1a60d011fb87982ee3c573c84d9 387 PRINTS PR00173 Glutamate-aspartate symporter signature 2 22 2.2E-6 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS01340 af36a1a60d011fb87982ee3c573c84d9 387 PRINTS PR00173 Glutamate-aspartate symporter signature 335 355 2.2E-6 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS05270 7c474e694aae0a256284da7d27709b10 400 SUPERFAMILY SSF52467 273 391 6.0E-44 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS05270 7c474e694aae0a256284da7d27709b10 400 PIRSF PIRSF000089 71 397 1.6E-100 T 23-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 CLI_RS05270 7c474e694aae0a256284da7d27709b10 400 PANTHER PTHR10909:SF309 251 391 3.4E-38 T 23-04-2016 CLI_RS05270 7c474e694aae0a256284da7d27709b10 400 SMART SM00893 74 260 1.7E-42 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS05270 7c474e694aae0a256284da7d27709b10 400 Pfam PF01012 Electron transfer flavoprotein domain 76 248 1.4E-43 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS05270 7c474e694aae0a256284da7d27709b10 400 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 274 355 1.6E-31 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CLI_RS05270 7c474e694aae0a256284da7d27709b10 400 Gene3D G3DSA:3.40.50.620 72 265 5.1E-74 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS05270 7c474e694aae0a256284da7d27709b10 400 SUPERFAMILY SSF52402 72 267 2.23E-55 T 23-04-2016 CLI_RS05270 7c474e694aae0a256284da7d27709b10 400 Gene3D G3DSA:3.30.70.20 20 64 4.5E-5 T 23-04-2016 CLI_RS05270 7c474e694aae0a256284da7d27709b10 400 Gene3D G3DSA:3.40.50.1220 267 394 2.6E-48 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS05270 7c474e694aae0a256284da7d27709b10 400 SUPERFAMILY SSF54862 16 58 4.83E-5 T 23-04-2016 CLI_RS05270 7c474e694aae0a256284da7d27709b10 400 PANTHER PTHR10909 251 391 3.4E-38 T 23-04-2016 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 Pfam PF02811 PHP domain 15 186 9.4E-53 T 23-04-2016 IPR004013 PHP domain GO:0003824 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 SUPERFAMILY SSF89550 14 276 1.77E-46 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 PANTHER PTHR32294 339 1185 0.0 T 23-04-2016 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 PANTHER PTHR32294 9 323 0.0 T 23-04-2016 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 PANTHER PTHR32294:SF0 339 1185 0.0 T 23-04-2016 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 PANTHER PTHR32294:SF0 9 323 0.0 T 23-04-2016 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 13 1065 0.0 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 SMART SM00481 14 81 4.8E-29 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 Pfam PF14579 Helix-hairpin-helix motif 829 917 9.0E-24 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 746 1.3E-174 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 Gene3D G3DSA:3.20.20.140 14 270 2.1E-59 T 23-04-2016 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 Pfam PF01336 OB-fold nucleic acid binding domain 1028 1106 5.5E-8 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLI_RS17310 1f6c759c9cd11c92ae1cd424cb97da2f 1185 Gene3D G3DSA:2.40.50.140 1018 1090 1.4E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS11165 6fc950b915e3b604996262049480cf8c 651 PANTHER PTHR31645:SF0 2 625 1.4E-149 T 23-04-2016 CLI_RS11165 6fc950b915e3b604996262049480cf8c 651 Pfam PF03169 OPT oligopeptide transporter protein 35 597 1.8E-89 T 23-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 CLI_RS11165 6fc950b915e3b604996262049480cf8c 651 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 36 596 5.5E-93 T 23-04-2016 IPR004814 Oligopeptide transporter OPT CLI_RS11165 6fc950b915e3b604996262049480cf8c 651 PANTHER PTHR31645 2 625 1.4E-149 T 23-04-2016 CLI_RS00080 50d44172cd6b0801c85eb1560118e58c 387 Pfam PF04015 Domain of unknown function (DUF362) 44 242 3.2E-42 T 23-04-2016 IPR007160 Domain of unknown function DUF362 CLI_RS00080 50d44172cd6b0801c85eb1560118e58c 387 Gene3D G3DSA:3.30.70.20 303 374 2.7E-15 T 23-04-2016 CLI_RS00080 50d44172cd6b0801c85eb1560118e58c 387 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 356 367 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS00080 50d44172cd6b0801c85eb1560118e58c 387 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 321 332 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS00080 50d44172cd6b0801c85eb1560118e58c 387 Pfam PF13237 4Fe-4S dicluster domain 316 367 7.7E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS00080 50d44172cd6b0801c85eb1560118e58c 387 PANTHER PTHR24960 88 376 7.6E-176 T 23-04-2016 CLI_RS00080 50d44172cd6b0801c85eb1560118e58c 387 PANTHER PTHR24960:SF25 88 376 7.6E-176 T 23-04-2016 CLI_RS00080 50d44172cd6b0801c85eb1560118e58c 387 SUPERFAMILY SSF54862 302 374 9.84E-15 T 23-04-2016 CLI_RS05140 efd46caa59de8f4820a0171709650a9d 154 SUPERFAMILY SSF55729 1 153 1.48E-33 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05140 efd46caa59de8f4820a0171709650a9d 154 Gene3D G3DSA:3.40.630.30 1 153 9.3E-42 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05140 efd46caa59de8f4820a0171709650a9d 154 PANTHER PTHR23091 1 153 1.9E-15 T 23-04-2016 CLI_RS05140 efd46caa59de8f4820a0171709650a9d 154 Pfam PF13673 Acetyltransferase (GNAT) domain 28 144 5.3E-22 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS07075 c4b762df99b8af8c37d06a8f4f86205a 318 Gene3D G3DSA:1.10.3720.10 97 310 5.0E-11 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07075 c4b762df99b8af8c37d06a8f4f86205a 318 PANTHER PTHR30465:SF24 4 318 1.4E-122 T 23-04-2016 CLI_RS07075 c4b762df99b8af8c37d06a8f4f86205a 318 PANTHER PTHR30465 4 318 1.4E-122 T 23-04-2016 CLI_RS07075 c4b762df99b8af8c37d06a8f4f86205a 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 318 1.4E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07075 c4b762df99b8af8c37d06a8f4f86205a 318 SUPERFAMILY SSF161098 96 305 1.06E-10 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS13515 1e72aca071ab2fe55890f149d14226c2 365 Gene3D G3DSA:3.90.1150.10 244 363 7.4E-30 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS13515 1e72aca071ab2fe55890f149d14226c2 365 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 2 347 1.3E-129 T 23-04-2016 IPR026385 Aminotransferase, LLPSF_NHT_00031 family CLI_RS13515 1e72aca071ab2fe55890f149d14226c2 365 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 362 2.3E-115 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLI_RS13515 1e72aca071ab2fe55890f149d14226c2 365 Gene3D G3DSA:3.40.640.10 1 242 5.8E-93 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS13515 1e72aca071ab2fe55890f149d14226c2 365 PANTHER PTHR30244:SF16 1 365 4.4E-142 T 23-04-2016 CLI_RS13515 1e72aca071ab2fe55890f149d14226c2 365 PIRSF PIRSF000390 1 365 6.2E-110 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLI_RS13515 1e72aca071ab2fe55890f149d14226c2 365 SUPERFAMILY SSF53383 2 364 4.44E-118 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS13515 1e72aca071ab2fe55890f149d14226c2 365 PANTHER PTHR30244 1 365 4.4E-142 T 23-04-2016 CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 Pfam PF00512 His Kinase A (phospho-acceptor) domain 363 429 3.0E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 SMART SM00387 475 587 4.3E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 Gene3D G3DSA:1.10.287.130 367 414 2.2E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 584 6.9E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 SUPERFAMILY SSF47384 350 429 8.83E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 SMART SM00388 361 429 3.6E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 SUPERFAMILY SSF55785 213 333 2.09E-8 T 23-04-2016 IPR000014 PAS domain CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 526 2.0E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 2.0E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 565 2.0E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 584 2.0E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 PANTHER PTHR24423 11 25 7.3E-90 T 23-04-2016 CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 PANTHER PTHR24423 203 584 7.3E-90 T 23-04-2016 CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 Gene3D G3DSA:3.30.450.20 223 366 2.8E-10 T 23-04-2016 CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 Pfam PF13188 PAS domain 227 281 2.0E-4 T 23-04-2016 IPR000014 PAS domain CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 Gene3D G3DSA:3.30.565.10 415 584 4.3E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 SUPERFAMILY SSF55874 418 587 3.14E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01885 29cd96132b502a9d7784d8bbf63342a7 615 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 222 340 2.3E-11 T 23-04-2016 IPR000014 PAS domain CLI_RS01780 5ce0e166f0ed337f5645ab14115a48a0 433 Pfam PF00860 Permease family 23 398 1.6E-96 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS01780 5ce0e166f0ed337f5645ab14115a48a0 433 TIGRFAM TIGR03173 pbuX: xanthine permease 26 430 4.4E-148 T 23-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CLI_RS01780 5ce0e166f0ed337f5645ab14115a48a0 433 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 346 366 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 CLI_RS01780 5ce0e166f0ed337f5645ab14115a48a0 433 PANTHER PTHR11119 10 429 2.2E-108 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS01780 5ce0e166f0ed337f5645ab14115a48a0 433 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 19 428 1.6E-120 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 CLI_RS08200 b2992f1e97cd1a1352d460acdbb93399 273 PANTHER PTHR41773 2 268 3.9E-111 T 23-04-2016 CLI_RS08200 b2992f1e97cd1a1352d460acdbb93399 273 Gene3D G3DSA:3.30.460.10 22 189 2.6E-25 T 23-04-2016 CLI_RS08200 b2992f1e97cd1a1352d460acdbb93399 273 Pfam PF04607 Region found in RelA / SpoT proteins 67 206 1.0E-29 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 CLI_RS08200 b2992f1e97cd1a1352d460acdbb93399 273 SMART SM00954 67 209 5.4E-29 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 CLI_RS08200 b2992f1e97cd1a1352d460acdbb93399 273 SUPERFAMILY SSF81301 26 234 4.74E-33 T 23-04-2016 CLI_RS12515 4335bd4ae57cf244542cba313d66df76 216 Gene3D G3DSA:3.20.20.70 2 214 1.2E-92 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS12515 4335bd4ae57cf244542cba313d66df76 216 PIRSF PIRSF001461 1 216 8.0E-94 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLI_RS12515 4335bd4ae57cf244542cba313d66df76 216 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLI_RS12515 4335bd4ae57cf244542cba313d66df76 216 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 213 2.0E-91 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLI_RS12515 4335bd4ae57cf244542cba313d66df76 216 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 200 9.7E-83 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLI_RS12515 4335bd4ae57cf244542cba313d66df76 216 PANTHER PTHR11749 1 216 2.9E-120 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLI_RS12515 4335bd4ae57cf244542cba313d66df76 216 SUPERFAMILY SSF51366 1 214 2.04E-74 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLI_RS07180 f8b5a0fb360a780c5aa6cce691b175e3 385 Pfam PF07730 Histidine kinase 187 252 1.1E-17 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CLI_RS07180 f8b5a0fb360a780c5aa6cce691b175e3 385 PANTHER PTHR24421:SF15 7 378 9.6E-129 T 23-04-2016 CLI_RS07180 f8b5a0fb360a780c5aa6cce691b175e3 385 Gene3D G3DSA:3.30.565.10 282 378 1.1E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS07180 f8b5a0fb360a780c5aa6cce691b175e3 385 SUPERFAMILY SSF55874 295 379 9.3E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS07180 f8b5a0fb360a780c5aa6cce691b175e3 385 PANTHER PTHR24421 7 378 9.6E-129 T 23-04-2016 CLI_RS10200 967bc133baca708b423300faa9e1090c 228 SUPERFAMILY SSF161098 12 208 1.83E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS10200 967bc133baca708b423300faa9e1090c 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 117 5.3E-28 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CLI_RS10200 967bc133baca708b423300faa9e1090c 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 223 1.9E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS10200 967bc133baca708b423300faa9e1090c 228 PANTHER PTHR30614 2 228 5.7E-134 T 23-04-2016 CLI_RS10200 967bc133baca708b423300faa9e1090c 228 PANTHER PTHR30614:SF15 2 228 5.7E-134 T 23-04-2016 CLI_RS10200 967bc133baca708b423300faa9e1090c 228 Gene3D G3DSA:1.10.3720.10 13 223 1.1E-54 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS02900 ea002025d7669ea6a14597e339e8a29e 141 SUPERFAMILY SSF158397 26 140 4.05E-35 T 23-04-2016 CLI_RS02900 ea002025d7669ea6a14597e339e8a29e 141 Gene3D G3DSA:1.20.120.490 26 140 8.4E-37 T 23-04-2016 IPR024042 Hypothetical protein TM1646-like domain CLI_RS02900 ea002025d7669ea6a14597e339e8a29e 141 Pfam PF03885 Protein of unknown function (DUF327) 13 140 3.3E-39 T 23-04-2016 IPR005585 Protein of unknown function DUF327 CLI_RS01385 49c569dfbd56bfedb4d1884ff85cda93 474 PANTHER PTHR11999:SF70 37 474 1.5E-153 T 23-04-2016 CLI_RS01385 49c569dfbd56bfedb4d1884ff85cda93 474 Gene3D G3DSA:3.40.640.10 85 354 5.6E-82 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS01385 49c569dfbd56bfedb4d1884ff85cda93 474 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 62 401 6.0E-48 T 23-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CLI_RS01385 49c569dfbd56bfedb4d1884ff85cda93 474 Gene3D G3DSA:3.90.1150.10 355 464 2.9E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS01385 49c569dfbd56bfedb4d1884ff85cda93 474 SUPERFAMILY SSF53383 22 467 7.34E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS01385 49c569dfbd56bfedb4d1884ff85cda93 474 PANTHER PTHR11999 37 474 1.5E-153 T 23-04-2016 CLI_RS01385 49c569dfbd56bfedb4d1884ff85cda93 474 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 340 355 1.0E-6 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 CLI_RS01385 49c569dfbd56bfedb4d1884ff85cda93 474 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 383 402 1.0E-6 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 CLI_RS01385 49c569dfbd56bfedb4d1884ff85cda93 474 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 75 94 1.0E-6 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 CLI_RS01385 49c569dfbd56bfedb4d1884ff85cda93 474 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 114 133 1.0E-6 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 1.3E-11 T 23-04-2016 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 1.3E-11 T 23-04-2016 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 1.3E-11 T 23-04-2016 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 1.3E-11 T 23-04-2016 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 7.4E-19 T 23-04-2016 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 7.4E-19 T 23-04-2016 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 7.4E-19 T 23-04-2016 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 7.4E-19 T 23-04-2016 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 115 7.4E-19 T 23-04-2016 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 PANTHER PTHR22912:SF1 1 408 4.4E-136 T 23-04-2016 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 290 5.7E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 PANTHER PTHR22912 1 408 4.4E-136 T 23-04-2016 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 Gene3D G3DSA:3.50.50.60 101 299 4.8E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 SUPERFAMILY SSF51905 1 300 2.01E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06940 9af63bbcf8cdf85aee382bd4e59236c8 408 Gene3D G3DSA:3.50.50.60 1 100 6.9E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 Gene3D G3DSA:3.40.50.620 389 624 1.8E-143 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 Gene3D G3DSA:3.40.50.620 6 194 1.8E-143 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 PANTHER PTHR11946:SF87 262 925 0.0 T 23-04-2016 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 PANTHER PTHR11946:SF87 1 242 0.0 T 23-04-2016 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 7 833 2.5E-293 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 SUPERFAMILY SSF47323 645 881 7.85E-57 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 3 1038 14.188 T 23-04-2016 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 Gene3D G3DSA:3.90.740.10 202 372 3.0E-57 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 SUPERFAMILY SSF52374 10 198 2.62E-135 T 23-04-2016 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 SUPERFAMILY SSF52374 386 638 2.62E-135 T 23-04-2016 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 Pfam PF08264 Anticodon-binding domain of tRNA 676 827 2.8E-37 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 SUPERFAMILY SSF47323 952 1033 4.05E-6 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 Gene3D G3DSA:1.10.730.10 629 819 5.4E-57 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 619 2.4E-188 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 SUPERFAMILY SSF50677 199 386 1.44E-51 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 509 522 6.7E-29 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 41 52 6.7E-29 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 549 558 6.7E-29 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 384 399 6.7E-29 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 221 244 6.7E-29 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 PANTHER PTHR11946 262 925 0.0 T 23-04-2016 CLI_RS00630 49e70eb45e87d649080132e3cb7d434f 1038 PANTHER PTHR11946 1 242 0.0 T 23-04-2016 CLI_RS12645 357b9bb4a7a75651ddfe541bb6f59abe 290 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 12 286 3.1E-83 T 23-04-2016 IPR011862 Phosphate binding protein GO:0006810 CLI_RS12645 357b9bb4a7a75651ddfe541bb6f59abe 290 SUPERFAMILY SSF53850 44 287 6.44E-70 T 23-04-2016 CLI_RS12645 357b9bb4a7a75651ddfe541bb6f59abe 290 Gene3D G3DSA:3.40.190.10 7 114 4.4E-14 T 23-04-2016 CLI_RS12645 357b9bb4a7a75651ddfe541bb6f59abe 290 Gene3D G3DSA:3.40.190.10 248 286 4.4E-14 T 23-04-2016 CLI_RS12645 357b9bb4a7a75651ddfe541bb6f59abe 290 Gene3D G3DSA:3.40.190.10 122 247 3.2E-43 T 23-04-2016 CLI_RS12645 357b9bb4a7a75651ddfe541bb6f59abe 290 Pfam PF12849 PBP superfamily domain 36 273 6.5E-40 T 23-04-2016 IPR024370 PBP domain CLI_RS12645 357b9bb4a7a75651ddfe541bb6f59abe 290 PANTHER PTHR30570 6 290 4.5E-146 T 23-04-2016 CLI_RS12645 357b9bb4a7a75651ddfe541bb6f59abe 290 PANTHER PTHR30570:SF4 6 290 4.5E-146 T 23-04-2016 CLI_RS09755 f4e772cc7d0dc53d8ac93d7fb4d563ff 283 Pfam PF12679 ABC-2 family transporter protein 2 280 1.6E-8 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 CLI_RS12935 0bed37af2191e185dea1e797b4bb8e06 336 Gene3D G3DSA:3.40.47.10 1 178 1.3E-44 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS12935 0bed37af2191e185dea1e797b4bb8e06 336 PANTHER PTHR34069:SF2 1 334 5.9E-102 T 23-04-2016 CLI_RS12935 0bed37af2191e185dea1e797b4bb8e06 336 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 111 193 1.8E-17 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CLI_RS12935 0bed37af2191e185dea1e797b4bb8e06 336 Gene3D G3DSA:3.40.47.10 179 334 6.0E-19 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS12935 0bed37af2191e185dea1e797b4bb8e06 336 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 255 334 7.5E-17 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CLI_RS12935 0bed37af2191e185dea1e797b4bb8e06 336 SUPERFAMILY SSF53901 195 332 1.61E-15 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS12935 0bed37af2191e185dea1e797b4bb8e06 336 SUPERFAMILY SSF53901 4 186 5.01E-38 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS12935 0bed37af2191e185dea1e797b4bb8e06 336 PANTHER PTHR34069 1 334 5.9E-102 T 23-04-2016 CLI_RS04840 128f5ec7555138b821ff9d7580177d2c 362 PANTHER PTHR11751 2 361 1.1E-168 T 23-04-2016 CLI_RS04840 128f5ec7555138b821ff9d7580177d2c 362 Gene3D G3DSA:3.40.640.10 30 259 4.6E-65 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS04840 128f5ec7555138b821ff9d7580177d2c 362 Pfam PF00155 Aminotransferase class I and II 16 357 4.6E-33 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS04840 128f5ec7555138b821ff9d7580177d2c 362 Gene3D G3DSA:3.90.1150.10 260 361 3.4E-30 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS04840 128f5ec7555138b821ff9d7580177d2c 362 PANTHER PTHR11751:SF338 2 361 1.1E-168 T 23-04-2016 CLI_RS04840 128f5ec7555138b821ff9d7580177d2c 362 SUPERFAMILY SSF53383 11 360 4.72E-63 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS06125 25ad3cd06ea1cbd77605b8c8c17d48b8 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 113 2.1E-27 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CLI_RS06125 25ad3cd06ea1cbd77605b8c8c17d48b8 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 219 5.8E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06125 25ad3cd06ea1cbd77605b8c8c17d48b8 222 SUPERFAMILY SSF161098 16 204 6.02E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06125 25ad3cd06ea1cbd77605b8c8c17d48b8 222 PANTHER PTHR30614:SF16 1 222 5.3E-143 T 23-04-2016 CLI_RS06125 25ad3cd06ea1cbd77605b8c8c17d48b8 222 PANTHER PTHR30614 1 222 5.3E-143 T 23-04-2016 CLI_RS06125 25ad3cd06ea1cbd77605b8c8c17d48b8 222 Gene3D G3DSA:1.10.3720.10 16 218 3.2E-51 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS10800 e52ac12fb77c626edc5ea4427896e3eb 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 7.3E-10 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS10800 e52ac12fb77c626edc5ea4427896e3eb 204 Pfam PF12464 Maltose acetyltransferase 6 57 1.8E-9 T 23-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CLI_RS10800 e52ac12fb77c626edc5ea4427896e3eb 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CLI_RS10800 e52ac12fb77c626edc5ea4427896e3eb 204 SUPERFAMILY SSF51161 2 194 2.36E-54 T 23-04-2016 IPR011004 Trimeric LpxA-like CLI_RS10800 e52ac12fb77c626edc5ea4427896e3eb 204 PANTHER PTHR23416:SF58 1 201 4.5E-77 T 23-04-2016 CLI_RS10800 e52ac12fb77c626edc5ea4427896e3eb 204 SMART SM01266 4 58 3.5E-12 T 23-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CLI_RS10800 e52ac12fb77c626edc5ea4427896e3eb 204 PANTHER PTHR23416 1 201 4.5E-77 T 23-04-2016 CLI_RS10800 e52ac12fb77c626edc5ea4427896e3eb 204 Gene3D G3DSA:2.160.10.10 2 189 6.2E-59 T 23-04-2016 CLI_RS00145 607e520d087a94e6754bad051f3d90f3 532 PANTHER PTHR10566 3 524 7.3E-157 T 23-04-2016 CLI_RS00145 607e520d087a94e6754bad051f3d90f3 532 Gene3D G3DSA:3.90.1200.10 210 291 2.3E-13 T 23-04-2016 CLI_RS00145 607e520d087a94e6754bad051f3d90f3 532 SUPERFAMILY SSF56112 172 314 5.5E-25 T 23-04-2016 IPR011009 Protein kinase-like domain CLI_RS00145 607e520d087a94e6754bad051f3d90f3 532 SUPERFAMILY SSF56112 75 138 5.5E-25 T 23-04-2016 IPR011009 Protein kinase-like domain CLI_RS00145 607e520d087a94e6754bad051f3d90f3 532 Pfam PF03109 ABC1 family 93 208 3.4E-28 T 23-04-2016 IPR004147 UbiB domain CLI_RS00145 607e520d087a94e6754bad051f3d90f3 532 PANTHER PTHR10566:SF10 3 524 7.3E-157 T 23-04-2016 CLI_RS05380 4803af15d5638001f138a34400a2c187 261 Gene3D G3DSA:1.10.1740.10 3 73 3.2E-17 T 23-04-2016 CLI_RS05380 4803af15d5638001f138a34400a2c187 261 Gene3D G3DSA:1.10.10.10 113 167 8.8E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05380 4803af15d5638001f138a34400a2c187 261 Pfam PF08281 Sigma-70, region 4 116 163 7.7E-7 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS05380 4803af15d5638001f138a34400a2c187 261 PANTHER PTHR30173 3 163 3.7E-24 T 23-04-2016 CLI_RS05380 4803af15d5638001f138a34400a2c187 261 Pfam PF04542 Sigma-70 region 2 7 72 1.5E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS05380 4803af15d5638001f138a34400a2c187 261 SUPERFAMILY SSF88659 120 173 2.24E-7 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS05380 4803af15d5638001f138a34400a2c187 261 SUPERFAMILY SSF88946 4 84 9.02E-16 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS05380 4803af15d5638001f138a34400a2c187 261 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 28 59 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS05380 4803af15d5638001f138a34400a2c187 261 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 164 7.9E-13 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS08215 dd89a38653920bb174584f249226d3a9 584 Gene3D G3DSA:3.40.50.300 336 564 6.0E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08215 dd89a38653920bb174584f249226d3a9 584 PANTHER PTHR24222 1 582 0.0 T 23-04-2016 CLI_RS08215 dd89a38653920bb174584f249226d3a9 584 SUPERFAMILY SSF52540 331 569 1.33E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08215 dd89a38653920bb174584f249226d3a9 584 Pfam PF00664 ABC transporter transmembrane region 22 292 1.4E-25 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS08215 dd89a38653920bb174584f249226d3a9 584 PANTHER PTHR24222:SF24 1 582 0.0 T 23-04-2016 CLI_RS08215 dd89a38653920bb174584f249226d3a9 584 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS08215 dd89a38653920bb174584f249226d3a9 584 Pfam PF00005 ABC transporter 353 500 1.4E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS08215 dd89a38653920bb174584f249226d3a9 584 SUPERFAMILY SSF90123 10 320 2.62E-56 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS08215 dd89a38653920bb174584f249226d3a9 584 Gene3D G3DSA:1.20.1560.10 10 320 6.9E-49 T 23-04-2016 CLI_RS08215 dd89a38653920bb174584f249226d3a9 584 SMART SM00382 361 552 6.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS07950 bf2edd2c1bff15e08b4bdad88ae2182f 312 SMART SM00382 29 212 1.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS07950 bf2edd2c1bff15e08b4bdad88ae2182f 312 Pfam PF00005 ABC transporter 21 163 2.1E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS07950 bf2edd2c1bff15e08b4bdad88ae2182f 312 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07950 bf2edd2c1bff15e08b4bdad88ae2182f 312 SUPERFAMILY SSF52540 3 227 4.57E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07950 bf2edd2c1bff15e08b4bdad88ae2182f 312 PANTHER PTHR24220 6 234 3.9E-98 T 23-04-2016 CLI_RS07950 bf2edd2c1bff15e08b4bdad88ae2182f 312 Gene3D G3DSA:3.40.50.300 2 232 1.5E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06385 73f035bf10f87f8dc84e3df49f485c33 354 SUPERFAMILY SSF82171 44 314 2.62E-15 T 23-04-2016 CLI_RS06385 73f035bf10f87f8dc84e3df49f485c33 354 Gene3D G3DSA:2.120.10.30 51 311 5.4E-13 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS11100 4fce801e95946bb06c2564fc46c11ccc 638 PANTHER PTHR30109:SF4 1 638 1.4E-301 T 23-04-2016 CLI_RS11100 4fce801e95946bb06c2564fc46c11ccc 638 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 14 637 1.4E-274 T 23-04-2016 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.99.2|KEGG: 00680+1.2.99.2|KEGG: 00720+1.2.99.2|MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLI_RS11100 4fce801e95946bb06c2564fc46c11ccc 638 PANTHER PTHR30109 1 638 1.4E-301 T 23-04-2016 CLI_RS11100 4fce801e95946bb06c2564fc46c11ccc 638 Pfam PF03063 Prismane/CO dehydrogenase family 54 617 8.8E-137 T 23-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS11100 4fce801e95946bb06c2564fc46c11ccc 638 Gene3D G3DSA:1.20.1270.30 71 243 2.5E-55 T 23-04-2016 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.99.2|KEGG: 00680+1.2.99.2|KEGG: 00720+1.2.99.2|MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLI_RS11100 4fce801e95946bb06c2564fc46c11ccc 638 Gene3D G3DSA:3.40.50.2030 245 419 2.0E-54 T 23-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS11100 4fce801e95946bb06c2564fc46c11ccc 638 SUPERFAMILY SSF56821 4 637 1.83E-182 T 23-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLI_RS11100 4fce801e95946bb06c2564fc46c11ccc 638 PIRSF PIRSF005023 3 638 8.0E-255 T 23-04-2016 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.99.2|KEGG: 00680+1.2.99.2|KEGG: 00720+1.2.99.2|MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLI_RS11100 4fce801e95946bb06c2564fc46c11ccc 638 Gene3D G3DSA:3.40.50.2030 420 637 1.4E-77 T 23-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLI_RS09195 bddaab543184bc9f77ef4bbfa9ef0132 252 Gene3D G3DSA:3.40.630.40 1 169 3.3E-34 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS09195 bddaab543184bc9f77ef4bbfa9ef0132 252 Pfam PF08239 Bacterial SH3 domain 200 251 1.8E-11 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS09195 bddaab543184bc9f77ef4bbfa9ef0132 252 SMART SM00287 192 252 1.9E-8 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS09195 bddaab543184bc9f77ef4bbfa9ef0132 252 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 3 168 7.9E-33 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS09195 bddaab543184bc9f77ef4bbfa9ef0132 252 SMART SM00646 65 168 6.6E-20 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS09195 bddaab543184bc9f77ef4bbfa9ef0132 252 PANTHER PTHR30404 1 204 1.3E-45 T 23-04-2016 CLI_RS09195 bddaab543184bc9f77ef4bbfa9ef0132 252 SUPERFAMILY SSF53187 1 169 4.39E-44 T 23-04-2016 CLI_RS10505 51a236fe4ba6ad4c562edd22cd2e9c54 925 SMART SM01276 55 350 6.4E-59 T 23-04-2016 IPR031161 Peptidase family M60 domain CLI_RS10505 51a236fe4ba6ad4c562edd22cd2e9c54 925 Gene3D G3DSA:2.10.10.20 876 924 6.2E-14 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS10505 51a236fe4ba6ad4c562edd22cd2e9c54 925 SMART SM00495 876 920 1.8E-9 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS10505 51a236fe4ba6ad4c562edd22cd2e9c54 925 Pfam PF02839 Carbohydrate binding domain 878 914 5.0E-10 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS10505 51a236fe4ba6ad4c562edd22cd2e9c54 925 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 97 368 5.8E-13 T 23-04-2016 IPR031161 Peptidase family M60 domain CLI_RS10505 51a236fe4ba6ad4c562edd22cd2e9c54 925 Pfam PF03272 Putative mucin or carbohydrate-binding module 555 665 5.1E-28 T 23-04-2016 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 CLI_RS10505 51a236fe4ba6ad4c562edd22cd2e9c54 925 Pfam PF03272 Putative mucin or carbohydrate-binding module 749 863 5.9E-27 T 23-04-2016 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 CLI_RS10505 51a236fe4ba6ad4c562edd22cd2e9c54 925 SUPERFAMILY SSF51055 874 919 4.32E-11 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 Gene3D G3DSA:1.10.150.300 129 198 1.1E-29 T 23-04-2016 IPR023192 TGS-like domain CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 PANTHER PTHR23305 1 365 1.6E-209 T 23-04-2016 CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 2 365 3.7E-157 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 365 44.717 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 Gene3D G3DSA:3.10.20.30 269 365 4.7E-48 T 23-04-2016 IPR012675 Beta-grasp domain CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 42 8.4E-37 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 3 23 8.4E-37 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 85 103 8.4E-37 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 68 83 8.4E-37 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 SUPERFAMILY SSF81271 281 362 1.05E-34 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 Pfam PF01926 50S ribosome-binding GTPase 3 120 3.3E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 Gene3D G3DSA:3.40.50.300 199 268 1.7E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 Gene3D G3DSA:3.40.50.300 2 128 1.7E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 SUPERFAMILY SSF52540 1 303 2.68E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 PIRSF PIRSF006641 1 365 1.1E-161 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CLI_RS07490 f14c2eaa3b0aad516344d0ea158ecbd1 365 Pfam PF06071 Protein of unknown function (DUF933) 281 364 1.2E-38 T 23-04-2016 IPR013029 Domain of unknown function DUF933 CLI_RS00410 7af6bb45e9a9d134df172fac705c4c90 109 SUPERFAMILY SSF54913 1 109 5.28E-13 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLI_RS00410 7af6bb45e9a9d134df172fac705c4c90 109 Pfam PF06153 Cyclic-di-AMP receptor 1 108 2.1E-49 T 23-04-2016 IPR010375 Cyclic-di-AMP receptor CLI_RS00410 7af6bb45e9a9d134df172fac705c4c90 109 Gene3D G3DSA:3.30.70.120 1 109 1.2E-16 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLI_RS00410 7af6bb45e9a9d134df172fac705c4c90 109 PANTHER PTHR38456 2 109 6.0E-44 T 23-04-2016 CLI_RS04885 f93c0239a05ab532aac8eb8aef707cbc 440 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 179 1.1E-19 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS04885 f93c0239a05ab532aac8eb8aef707cbc 440 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 1 431 38.541 T 23-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CLI_RS04885 f93c0239a05ab532aac8eb8aef707cbc 440 Gene3D G3DSA:3.40.50.300 77 188 8.4E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04885 f93c0239a05ab532aac8eb8aef707cbc 440 Gene3D G3DSA:3.40.50.300 1 46 4.2E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04885 f93c0239a05ab532aac8eb8aef707cbc 440 PANTHER PTHR21343 1 440 1.3E-175 T 23-04-2016 CLI_RS04885 f93c0239a05ab532aac8eb8aef707cbc 440 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 238 429 1.6E-35 T 23-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 CLI_RS04885 f93c0239a05ab532aac8eb8aef707cbc 440 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 4 438 5.1E-126 T 23-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CLI_RS04885 f93c0239a05ab532aac8eb8aef707cbc 440 Gene3D G3DSA:3.40.50.880 239 439 4.5E-19 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS04885 f93c0239a05ab532aac8eb8aef707cbc 440 SUPERFAMILY SSF52540 1 190 1.54E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04885 f93c0239a05ab532aac8eb8aef707cbc 440 PANTHER PTHR21343:SF6 1 440 1.3E-175 T 23-04-2016 CLI_RS04885 f93c0239a05ab532aac8eb8aef707cbc 440 SUPERFAMILY SSF52317 236 439 2.75E-25 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS18510 666e849db4a0081f620928283ea6e452 301 Gene3D G3DSA:1.10.10.10 1 78 1.1E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18510 666e849db4a0081f620928283ea6e452 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.3E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS18510 666e849db4a0081f620928283ea6e452 301 PANTHER PTHR30126:SF13 1 298 6.7E-117 T 23-04-2016 CLI_RS18510 666e849db4a0081f620928283ea6e452 301 SUPERFAMILY SSF46785 1 87 3.82E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18510 666e849db4a0081f620928283ea6e452 301 Gene3D G3DSA:3.40.190.10 91 190 2.5E-14 T 23-04-2016 CLI_RS18510 666e849db4a0081f620928283ea6e452 301 Gene3D G3DSA:3.40.190.10 191 249 1.5E-10 T 23-04-2016 CLI_RS18510 666e849db4a0081f620928283ea6e452 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.3E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS18510 666e849db4a0081f620928283ea6e452 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.3E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS18510 666e849db4a0081f620928283ea6e452 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.3E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS18510 666e849db4a0081f620928283ea6e452 301 Pfam PF03466 LysR substrate binding domain 89 293 6.1E-30 T 23-04-2016 IPR005119 LysR, substrate-binding CLI_RS18510 666e849db4a0081f620928283ea6e452 301 SUPERFAMILY SSF53850 91 295 5.83E-29 T 23-04-2016 CLI_RS18510 666e849db4a0081f620928283ea6e452 301 PANTHER PTHR30126 1 298 6.7E-117 T 23-04-2016 CLI_RS03730 a471da620f83d4930388a3422e88bd01 188 Gene3D G3DSA:3.40.630.30 3 181 4.7E-44 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03730 a471da620f83d4930388a3422e88bd01 188 Pfam PF13302 Acetyltransferase (GNAT) domain 11 151 9.1E-28 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS03730 a471da620f83d4930388a3422e88bd01 188 PANTHER PTHR13256 3 182 1.4E-33 T 23-04-2016 CLI_RS03730 a471da620f83d4930388a3422e88bd01 188 SUPERFAMILY SSF55729 3 155 9.23E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS07660 dad13384d2d2c1c5759c8677df308747 307 SUPERFAMILY SSF52151 7 304 4.45E-35 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CLI_RS07660 dad13384d2d2c1c5759c8677df308747 307 PANTHER PTHR14226 3 306 1.0E-131 T 23-04-2016 CLI_RS07660 dad13384d2d2c1c5759c8677df308747 307 Gene3D G3DSA:3.40.1090.10 34 197 1.9E-15 T 23-04-2016 CLI_RS07660 dad13384d2d2c1c5759c8677df308747 307 PANTHER PTHR14226:SF28 3 306 1.0E-131 T 23-04-2016 CLI_RS07660 dad13384d2d2c1c5759c8677df308747 307 Pfam PF01734 Patatin-like phospholipase 7 199 1.5E-27 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 CLI_RS14160 304b01976948f8e9c7633e361c4bb813 217 Pfam PF01144 Coenzyme A transferase 5 200 2.0E-34 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CLI_RS14160 304b01976948f8e9c7633e361c4bb813 217 SMART SM00882 5 201 9.8E-58 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CLI_RS14160 304b01976948f8e9c7633e361c4bb813 217 SUPERFAMILY SSF100950 2 216 4.47E-68 T 23-04-2016 CLI_RS14160 304b01976948f8e9c7633e361c4bb813 217 PANTHER PTHR13707 1 217 5.8E-118 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CLI_RS14160 304b01976948f8e9c7633e361c4bb813 217 Gene3D G3DSA:3.40.810.20 3 213 9.4E-84 T 23-04-2016 CLI_RS14160 304b01976948f8e9c7633e361c4bb813 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 2.7E-85 T 23-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 CLI_RS01465 2c691de813112aad882cd80a78dfc728 244 SMART SM00849 21 219 8.1E-9 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS01465 2c691de813112aad882cd80a78dfc728 244 Gene3D G3DSA:3.60.15.10 1 237 4.5E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS01465 2c691de813112aad882cd80a78dfc728 244 SUPERFAMILY SSF56281 1 229 3.8E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS01465 2c691de813112aad882cd80a78dfc728 244 Pfam PF00753 Metallo-beta-lactamase superfamily 24 186 5.2E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS01465 2c691de813112aad882cd80a78dfc728 244 PANTHER PTHR11935 118 244 6.0E-72 T 23-04-2016 CLI_RS01465 2c691de813112aad882cd80a78dfc728 244 PANTHER PTHR11935 11 99 6.0E-72 T 23-04-2016 CLI_RS01465 2c691de813112aad882cd80a78dfc728 244 PANTHER PTHR11935:SF95 118 244 6.0E-72 T 23-04-2016 CLI_RS01465 2c691de813112aad882cd80a78dfc728 244 PANTHER PTHR11935:SF95 11 99 6.0E-72 T 23-04-2016 CLI_RS02505 cf2ab3ae038f229a40851c297d6d3e6c 266 PANTHER PTHR20858:SF17 1 259 3.5E-129 T 23-04-2016 CLI_RS02505 cf2ab3ae038f229a40851c297d6d3e6c 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 255 6.2E-103 T 23-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLI_RS02505 cf2ab3ae038f229a40851c297d6d3e6c 266 SUPERFAMILY SSF53613 1 259 1.56E-84 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS02505 cf2ab3ae038f229a40851c297d6d3e6c 266 Gene3D G3DSA:3.40.1190.20 1 255 1.8E-103 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS02505 cf2ab3ae038f229a40851c297d6d3e6c 266 PANTHER PTHR20858 1 259 3.5E-129 T 23-04-2016 CLI_RS02505 cf2ab3ae038f229a40851c297d6d3e6c 266 Pfam PF08543 Phosphomethylpyrimidine kinase 11 252 2.9E-99 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 CLI_RS06950 8bbcd2d82bf9e6250fe852d85753e9d8 365 Gene3D G3DSA:3.30.565.10 216 358 7.0E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06950 8bbcd2d82bf9e6250fe852d85753e9d8 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 359 3.8E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS06950 8bbcd2d82bf9e6250fe852d85753e9d8 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 304 3.8E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS06950 8bbcd2d82bf9e6250fe852d85753e9d8 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 340 3.8E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS06950 8bbcd2d82bf9e6250fe852d85753e9d8 365 SUPERFAMILY SSF55874 215 359 8.38E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06950 8bbcd2d82bf9e6250fe852d85753e9d8 365 PANTHER PTHR24423 119 135 1.9E-31 T 23-04-2016 CLI_RS06950 8bbcd2d82bf9e6250fe852d85753e9d8 365 PANTHER PTHR24423 156 358 1.9E-31 T 23-04-2016 CLI_RS06950 8bbcd2d82bf9e6250fe852d85753e9d8 365 SMART SM00387 254 362 5.7E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06950 8bbcd2d82bf9e6250fe852d85753e9d8 365 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 255 358 2.4E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS07685 a1adf3ede216b832a214809262e53812 309 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 219 301 1.7E-4 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLI_RS07685 a1adf3ede216b832a214809262e53812 309 SUPERFAMILY SSF90002 218 301 2.22E-5 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLI_RS07685 a1adf3ede216b832a214809262e53812 309 PANTHER PTHR13748 1 302 3.2E-96 T 23-04-2016 CLI_RS07685 a1adf3ede216b832a214809262e53812 309 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 177 1.1E-42 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLI_RS07685 a1adf3ede216b832a214809262e53812 309 Gene3D G3DSA:3.30.1220.10 213 301 4.9E-5 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLI_RS07685 a1adf3ede216b832a214809262e53812 309 Gene3D G3DSA:3.40.50.300 1 193 4.2E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07685 a1adf3ede216b832a214809262e53812 309 SUPERFAMILY SSF52540 3 192 5.35E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07685 a1adf3ede216b832a214809262e53812 309 PANTHER PTHR13748:SF10 1 302 3.2E-96 T 23-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 CLI_RS10185 3104abeacc9426cdfcbc8d440ef510d3 302 SUPERFAMILY SSF103481 43 143 1.5E-13 T 23-04-2016 CLI_RS10185 3104abeacc9426cdfcbc8d440ef510d3 302 SUPERFAMILY SSF103481 214 299 1.96E-14 T 23-04-2016 CLI_RS10185 3104abeacc9426cdfcbc8d440ef510d3 302 PANTHER PTHR12715:SF20 1 300 3.5E-206 T 23-04-2016 CLI_RS10185 3104abeacc9426cdfcbc8d440ef510d3 302 Pfam PF00892 EamA-like transporter family 154 296 9.3E-21 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CLI_RS10185 3104abeacc9426cdfcbc8d440ef510d3 302 Pfam PF00892 EamA-like transporter family 8 141 1.8E-26 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CLI_RS10185 3104abeacc9426cdfcbc8d440ef510d3 302 PANTHER PTHR12715 1 300 3.5E-206 T 23-04-2016 CLI_RS00565 207bc4bdd449886a61c610504932b598 402 Pfam PF12704 MacB-like periplasmic core domain 21 237 5.9E-33 T 23-04-2016 IPR025857 MacB-like periplasmic core domain CLI_RS00565 207bc4bdd449886a61c610504932b598 402 Pfam PF02687 FtsX-like permease family 283 395 2.7E-23 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS00565 207bc4bdd449886a61c610504932b598 402 PANTHER PTHR30572 1 402 3.0E-94 T 23-04-2016 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 261 424 8.6E-46 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 Gene3D G3DSA:3.10.170.10 260 428 3.8E-46 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 Pfam PF03413 Peptidase propeptide and YPEB domain 148 212 3.9E-8 T 23-04-2016 IPR025711 PepSY domain CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 85 133 6.3E-8 T 23-04-2016 IPR011096 FTP domain CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 SUPERFAMILY SSF55486 259 586 6.41E-76 T 23-04-2016 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 504 520 4.764622E-19 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 415 431 4.764622E-19 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 436 447 4.764622E-19 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 377 397 4.764622E-19 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 Gene3D G3DSA:1.10.390.10 429 586 2.4E-49 T 23-04-2016 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 PANTHER PTHR33794 322 593 2.3E-215 T 23-04-2016 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 PANTHER PTHR33794 2 305 2.3E-215 T 23-04-2016 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 427 586 6.2E-49 T 23-04-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 PANTHER PTHR33794:SF1 322 593 2.3E-215 T 23-04-2016 CLI_RS07450 f23f036a891e4ecf9f4e1cd2cbbafed0 594 PANTHER PTHR33794:SF1 2 305 2.3E-215 T 23-04-2016 CLI_RS00215 45cc8343e15f9de293aedc8a5c68b828 240 SUPERFAMILY SSF51412 82 206 4.49E-14 T 23-04-2016 CLI_RS00215 45cc8343e15f9de293aedc8a5c68b828 240 Gene3D G3DSA:3.20.20.70 100 209 8.9E-12 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS15805 219337653e13ed08830367c17649aefc 94 TIGRFAM TIGR04069 ocin_ACP_rel: peptide maturation system acyl carrier-related protein 7 82 4.3E-30 T 23-04-2016 IPR023972 Conserved hypothetical protein CHP04069, acyl carrier-related CLI_RS15805 219337653e13ed08830367c17649aefc 94 SUPERFAMILY SSF47336 42 83 1.47E-5 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS15805 219337653e13ed08830367c17649aefc 94 Gene3D G3DSA:1.10.1200.10 4 90 2.7E-6 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS11080 45958b7b7a975dbee53b0962fbf90377 175 SUPERFAMILY SSF52218 32 95 5.03E-11 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS11080 45958b7b7a975dbee53b0962fbf90377 175 Gene3D G3DSA:3.40.50.360 31 164 4.0E-13 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS11080 45958b7b7a975dbee53b0962fbf90377 175 PANTHER PTHR10204:SF44 25 164 2.2E-94 T 23-04-2016 CLI_RS11080 45958b7b7a975dbee53b0962fbf90377 175 PANTHER PTHR10204 25 164 2.2E-94 T 23-04-2016 CLI_RS04810 cda120a0d59d5032f15a7dd83621e026 185 PIRSF PIRSF006135 6 185 4.2E-56 T 23-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 CLI_RS04810 cda120a0d59d5032f15a7dd83621e026 185 PANTHER PTHR34848 1 185 1.3E-72 T 23-04-2016 CLI_RS04810 cda120a0d59d5032f15a7dd83621e026 185 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 9 184 6.8E-58 T 23-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 CLI_RS04810 cda120a0d59d5032f15a7dd83621e026 185 Gene3D G3DSA:3.40.50.300 8 185 3.5E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04810 cda120a0d59d5032f15a7dd83621e026 185 SUPERFAMILY SSF52540 8 185 1.15E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00570 e3aa423e64219ac7000346023196e3b8 280 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 29 274 7.3E-90 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein CLI_RS00570 e3aa423e64219ac7000346023196e3b8 280 Gene3D G3DSA:3.40.50.300 24 274 1.1E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00570 e3aa423e64219ac7000346023196e3b8 280 ProSitePatterns PS01215 Mrp family signature. 143 159 - T 23-04-2016 IPR000808 Mrp, conserved site GO:0005524 CLI_RS00570 e3aa423e64219ac7000346023196e3b8 280 Hamap MF_02040 Iron-sulfur cluster carrier protein. 22 273 33.532 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein CLI_RS00570 e3aa423e64219ac7000346023196e3b8 280 PANTHER PTHR23264 28 274 3.9E-102 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein CLI_RS00570 e3aa423e64219ac7000346023196e3b8 280 SUPERFAMILY SSF52540 25 257 6.17E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 PANTHER PTHR13847 1 399 8.9E-74 T 23-04-2016 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 Pfam PF01266 FAD dependent oxidoreductase 38 382 6.7E-43 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 Gene3D G3DSA:2.102.10.10 424 510 9.9E-32 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 PRINTS PR00162 Rieske 2Fe-2S subunit signature 482 494 4.17E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 PRINTS PR00162 Rieske 2Fe-2S subunit signature 461 472 4.17E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 PRINTS PR00162 Rieske 2Fe-2S subunit signature 494 506 4.17E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 SUPERFAMILY SSF50022 390 509 3.27E-24 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 SUPERFAMILY SSF51905 35 265 9.06E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 SUPERFAMILY SSF51905 334 391 9.06E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 PANTHER PTHR13847:SF44 1 399 8.9E-74 T 23-04-2016 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 Pfam PF00355 Rieske [2Fe-2S] domain 432 509 1.0E-13 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 Gene3D G3DSA:3.50.50.60 343 394 6.8E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 Gene3D G3DSA:3.50.50.60 25 127 6.8E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS07740 2852838143e2723d8e0fe4acf89a23ee 521 Gene3D G3DSA:3.50.50.60 175 255 6.8E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06250 5715db6b341a0ad31af59f8eb376b2cb 123 PANTHER PTHR38445:SF2 1 117 1.2E-33 T 23-04-2016 CLI_RS06250 5715db6b341a0ad31af59f8eb376b2cb 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.3E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS06250 5715db6b341a0ad31af59f8eb376b2cb 123 SUPERFAMILY SSF46785 4 82 2.86E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06250 5715db6b341a0ad31af59f8eb376b2cb 123 PANTHER PTHR38445 1 117 1.2E-33 T 23-04-2016 CLI_RS06250 5715db6b341a0ad31af59f8eb376b2cb 123 SMART SM00345 15 74 8.6E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS06250 5715db6b341a0ad31af59f8eb376b2cb 123 Gene3D G3DSA:1.10.10.10 2 75 1.4E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02645 fe04e1db16bf567e22dc29e15d8740a3 334 PANTHER PTHR40446:SF1 1 334 4.1E-99 T 23-04-2016 CLI_RS02645 fe04e1db16bf567e22dc29e15d8740a3 334 Pfam PF09992 Phosphodiester glycosidase 149 332 2.8E-48 T 23-04-2016 IPR018711 Phosphodiester glycosidase CLI_RS02645 fe04e1db16bf567e22dc29e15d8740a3 334 PANTHER PTHR40446 1 334 4.1E-99 T 23-04-2016 CLI_RS05885 3676295fcbd60a6f024ab3b360a64bad 357 Gene3D G3DSA:3.40.640.10 15 252 6.4E-47 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS05885 3676295fcbd60a6f024ab3b360a64bad 357 PIRSF PIRSF000524 1 357 5.0E-92 T 23-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CLI_RS05885 3676295fcbd60a6f024ab3b360a64bad 357 SUPERFAMILY SSF53383 4 355 1.31E-87 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS05885 3676295fcbd60a6f024ab3b360a64bad 357 Pfam PF00266 Aminotransferase class-V 23 321 1.2E-30 T 23-04-2016 IPR000192 Aminotransferase class V domain CLI_RS05885 3676295fcbd60a6f024ab3b360a64bad 357 PANTHER PTHR21152 2 355 6.6E-109 T 23-04-2016 CLI_RS05885 3676295fcbd60a6f024ab3b360a64bad 357 Gene3D G3DSA:3.90.1150.10 253 355 1.6E-24 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS05885 3676295fcbd60a6f024ab3b360a64bad 357 PANTHER PTHR21152:SF21 2 355 6.6E-109 T 23-04-2016 CLI_RS12135 45a83ebc7a8a01a6a1ba2edab917cc14 238 Pfam PF00696 Amino acid kinase family 7 213 1.8E-28 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS12135 45a83ebc7a8a01a6a1ba2edab917cc14 238 PANTHER PTHR21499 2 238 4.2E-119 T 23-04-2016 CLI_RS12135 45a83ebc7a8a01a6a1ba2edab917cc14 238 PANTHER PTHR21499:SF23 2 238 4.2E-119 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CLI_RS12135 45a83ebc7a8a01a6a1ba2edab917cc14 238 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 235 44.362 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CLI_RS12135 45a83ebc7a8a01a6a1ba2edab917cc14 238 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 235 7.3E-98 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CLI_RS12135 45a83ebc7a8a01a6a1ba2edab917cc14 238 SUPERFAMILY SSF53633 4 236 3.4E-71 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS12135 45a83ebc7a8a01a6a1ba2edab917cc14 238 PIRSF PIRSF005650 1 238 1.9E-94 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CLI_RS12135 45a83ebc7a8a01a6a1ba2edab917cc14 238 Gene3D G3DSA:3.40.1160.10 2 235 2.8E-85 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS00615 824fe514ce72d9d126ab945ac6493df8 224 Pfam PF06304 Protein of unknown function (DUF1048) 16 90 2.6E-7 T 23-04-2016 IPR008316 Uncharacterised conserved protein UCP029876 CLI_RS00615 824fe514ce72d9d126ab945ac6493df8 224 PANTHER PTHR41307 2 223 1.1E-65 T 23-04-2016 CLI_RS00615 824fe514ce72d9d126ab945ac6493df8 224 SUPERFAMILY SSF158560 1 100 7.32E-24 T 23-04-2016 CLI_RS00615 824fe514ce72d9d126ab945ac6493df8 224 Gene3D G3DSA:1.10.1900.10 17 87 8.9E-9 T 23-04-2016 IPR002004 Polyadenylate-binding protein/Hyperplastic disc protein GO:0003723 CLI_RS11155 ec09a769887ed5095e0d03b3c2bb163b 207 Gene3D G3DSA:2.60.40.1240 79 207 2.3E-38 T 23-04-2016 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain CLI_RS11155 ec09a769887ed5095e0d03b3c2bb163b 207 Pfam PF11611 Domain of unknown function (DUF4352) 80 200 6.6E-27 T 23-04-2016 IPR029051 Domain of unknown function DUF4352 CLI_RS14540 6b82fba979e1ee724a7badff144c8345 213 PANTHER PTHR21327:SF15 1 211 4.8E-154 T 23-04-2016 CLI_RS14540 6b82fba979e1ee724a7badff144c8345 213 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 5.5E-76 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14540 6b82fba979e1ee724a7badff144c8345 213 Gene3D G3DSA:3.90.870.10 10 209 3.1E-89 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS14540 6b82fba979e1ee724a7badff144c8345 213 SUPERFAMILY SSF55821 7 209 1.63E-82 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS14540 6b82fba979e1ee724a7badff144c8345 213 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 6.3E-79 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14540 6b82fba979e1ee724a7badff144c8345 213 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 40.85 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CLI_RS14540 6b82fba979e1ee724a7badff144c8345 213 PANTHER PTHR21327 1 211 4.8E-154 T 23-04-2016 CLI_RS11615 3571a4cd3850c0ab3b9b95e57e29dcdf 269 Pfam PF01695 IstB-like ATP binding protein 124 235 4.0E-16 T 23-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 CLI_RS11615 3571a4cd3850c0ab3b9b95e57e29dcdf 269 PANTHER PTHR30050:SF4 1 269 2.0E-80 T 23-04-2016 CLI_RS11615 3571a4cd3850c0ab3b9b95e57e29dcdf 269 SUPERFAMILY SSF52540 93 251 2.24E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11615 3571a4cd3850c0ab3b9b95e57e29dcdf 269 PANTHER PTHR30050 1 269 2.0E-80 T 23-04-2016 CLI_RS11615 3571a4cd3850c0ab3b9b95e57e29dcdf 269 Gene3D G3DSA:3.40.50.300 74 252 2.7E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06015 e4b1eb84518bdad42143f4b320b23cb1 388 SMART SM01324 302 386 2.4E-30 T 23-04-2016 IPR025582 YARHG domain CLI_RS06015 e4b1eb84518bdad42143f4b320b23cb1 388 Pfam PF13240 zinc-ribbon domain 3 24 1.7E-7 T 23-04-2016 IPR026870 Zinc-ribbon domain CLI_RS06015 e4b1eb84518bdad42143f4b320b23cb1 388 Pfam PF13308 YARHG domain 303 383 3.9E-25 T 23-04-2016 IPR025582 YARHG domain CLI_RS06015 e4b1eb84518bdad42143f4b320b23cb1 388 PANTHER PTHR40038:SF1 2 388 6.0E-107 T 23-04-2016 CLI_RS06015 e4b1eb84518bdad42143f4b320b23cb1 388 PANTHER PTHR40038 2 388 6.0E-107 T 23-04-2016 CLI_RS01330 ef752f3d16bab4c580efe336d4d6f2d9 252 SUPERFAMILY SSF64167 1 250 8.37E-75 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CLI_RS01330 ef752f3d16bab4c580efe336d4d6f2d9 252 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 238 2.7E-66 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CLI_RS01330 ef752f3d16bab4c580efe336d4d6f2d9 252 Pfam PF01975 Survival protein SurE 3 188 6.0E-57 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CLI_RS01330 ef752f3d16bab4c580efe336d4d6f2d9 252 Gene3D G3DSA:3.40.1210.10 1 250 8.3E-82 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CLI_RS01330 ef752f3d16bab4c580efe336d4d6f2d9 252 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 252 32.479 T 23-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CLI_RS01330 ef752f3d16bab4c580efe336d4d6f2d9 252 PANTHER PTHR30457 1 252 1.5E-92 T 23-04-2016 CLI_RS04520 bcf05897f69aed11e18548f2615801c1 102 SUPERFAMILY SSF46785 4 101 5.77E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04520 bcf05897f69aed11e18548f2615801c1 102 PANTHER PTHR33204 2 101 5.2E-52 T 23-04-2016 CLI_RS04520 bcf05897f69aed11e18548f2615801c1 102 Pfam PF01638 HxlR-like helix-turn-helix 16 101 2.0E-33 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type CLI_RS04520 bcf05897f69aed11e18548f2615801c1 102 PANTHER PTHR33204:SF13 2 101 5.2E-52 T 23-04-2016 CLI_RS04520 bcf05897f69aed11e18548f2615801c1 102 Gene3D G3DSA:1.10.10.10 4 101 5.4E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11340 ef04a10083fee7cf1a4b11a3b7480577 465 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 237 458 1.4E-44 T 23-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CLI_RS11340 ef04a10083fee7cf1a4b11a3b7480577 465 PANTHER PTHR11654 1 464 9.5E-161 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS11340 ef04a10083fee7cf1a4b11a3b7480577 465 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 147 159 - T 23-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS11340 ef04a10083fee7cf1a4b11a3b7480577 465 Pfam PF00854 POT family 85 201 1.1E-14 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS11340 ef04a10083fee7cf1a4b11a3b7480577 465 Pfam PF00854 POT family 231 426 2.2E-31 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS11340 ef04a10083fee7cf1a4b11a3b7480577 465 PANTHER PTHR11654:SF119 1 464 9.5E-161 T 23-04-2016 CLI_RS11340 ef04a10083fee7cf1a4b11a3b7480577 465 Gene3D G3DSA:1.20.1250.20 14 213 2.1E-21 T 23-04-2016 CLI_RS11340 ef04a10083fee7cf1a4b11a3b7480577 465 Gene3D G3DSA:1.20.1250.20 247 452 3.1E-7 T 23-04-2016 CLI_RS11340 ef04a10083fee7cf1a4b11a3b7480577 465 SUPERFAMILY SSF103473 12 453 6.02E-37 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS16830 fad833d27ee8b3e23b3333f430978e8d 374 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 40 374 1.4E-66 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS16830 fad833d27ee8b3e23b3333f430978e8d 374 PANTHER PTHR30548:SF5 1 374 5.3E-245 T 23-04-2016 CLI_RS16830 fad833d27ee8b3e23b3333f430978e8d 374 PANTHER PTHR30548 1 374 5.3E-245 T 23-04-2016 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 SUPERFAMILY SSF48452 465 570 1.02E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 SUPERFAMILY SSF48452 353 378 1.02E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 Pfam PF00931 NB-ARC domain 25 240 7.7E-6 T 23-04-2016 IPR002182 NB-ARC GO:0043531 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 SUPERFAMILY SSF52540 16 261 1.54E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 Pfam PF00196 Bacterial regulatory proteins, luxR family 802 854 1.1E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 Gene3D G3DSA:3.40.50.300 25 183 1.2E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 SMART SM00421 800 857 8.2E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 ProSitePatterns PS00622 LuxR-type HTH domain signature. 817 844 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 803 817 6.3E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 817 833 6.3E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 833 845 6.3E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 Gene3D G3DSA:1.25.40.10 357 377 2.6E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 Gene3D G3DSA:1.25.40.10 432 433 2.6E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 Gene3D G3DSA:1.25.40.10 472 628 2.6E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 Gene3D G3DSA:1.25.40.10 671 773 2.6E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 Gene3D G3DSA:1.10.10.10 797 858 2.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07965 48aaa88b293784fe6c58c92677881ef5 865 SUPERFAMILY SSF46894 793 861 2.96E-19 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS07750 25c6cb5d4a02afae7325cc5d7e0e60eb 637 SMART SM00534 459 636 2.2E-12 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS07750 25c6cb5d4a02afae7325cc5d7e0e60eb 637 SUPERFAMILY SSF48334 126 262 7.19E-7 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLI_RS07750 25c6cb5d4a02afae7325cc5d7e0e60eb 637 SUPERFAMILY SSF52540 430 633 2.01E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07750 25c6cb5d4a02afae7325cc5d7e0e60eb 637 Pfam PF00488 MutS domain V 463 620 7.1E-27 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS07750 25c6cb5d4a02afae7325cc5d7e0e60eb 637 Gene3D G3DSA:1.10.1420.10 127 197 1.5E-7 T 23-04-2016 CLI_RS07750 25c6cb5d4a02afae7325cc5d7e0e60eb 637 Gene3D G3DSA:1.10.1420.10 249 299 1.5E-7 T 23-04-2016 CLI_RS07750 25c6cb5d4a02afae7325cc5d7e0e60eb 637 Gene3D G3DSA:3.40.50.300 428 633 1.6E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07750 25c6cb5d4a02afae7325cc5d7e0e60eb 637 PANTHER PTHR11361 231 632 3.5E-70 T 23-04-2016 CLI_RS07750 25c6cb5d4a02afae7325cc5d7e0e60eb 637 PANTHER PTHR11361 110 211 3.5E-70 T 23-04-2016 CLI_RS07750 25c6cb5d4a02afae7325cc5d7e0e60eb 637 PANTHER PTHR11361:SF34 231 632 3.5E-70 T 23-04-2016 CLI_RS07750 25c6cb5d4a02afae7325cc5d7e0e60eb 637 PANTHER PTHR11361:SF34 110 211 3.5E-70 T 23-04-2016 CLI_RS02320 d0f76bc5a56e80a68cc69fef36acf006 287 Pfam PF00753 Metallo-beta-lactamase superfamily 48 243 6.1E-23 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02320 d0f76bc5a56e80a68cc69fef36acf006 287 Gene3D G3DSA:3.60.15.10 36 285 2.8E-51 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02320 d0f76bc5a56e80a68cc69fef36acf006 287 SUPERFAMILY SSF56281 38 285 7.08E-63 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02320 d0f76bc5a56e80a68cc69fef36acf006 287 PANTHER PTHR30619 32 285 2.4E-95 T 23-04-2016 CLI_RS02320 d0f76bc5a56e80a68cc69fef36acf006 287 SMART SM00849 50 244 2.6E-14 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02320 d0f76bc5a56e80a68cc69fef36acf006 287 PANTHER PTHR30619:SF1 32 285 2.4E-95 T 23-04-2016 CLI_RS08105 d7da061776468c2f75bbc65aa845eda9 175 Pfam PF04143 Sulphur transport 5 165 1.5E-36 T 23-04-2016 IPR007272 Sulphur transport domain CLI_RS08105 d7da061776468c2f75bbc65aa845eda9 175 PANTHER PTHR30574 1 175 1.1E-43 T 23-04-2016 CLI_RS08105 d7da061776468c2f75bbc65aa845eda9 175 PANTHER PTHR30574:SF5 1 175 1.1E-43 T 23-04-2016 CLI_RS04365 3c1c5f95ebbeae375aafe82bc8454cbc 110 Pfam PF08821 CGGC domain 2 110 2.1E-31 T 23-04-2016 IPR014925 Uncharacterised domain CGGC-dom CLI_RS04365 3c1c5f95ebbeae375aafe82bc8454cbc 110 SMART SM01078 2 110 5.4E-57 T 23-04-2016 IPR014925 Uncharacterised domain CGGC-dom CLI_RS11035 aa0360162c8d452ee068f44f3137f18d 137 Gene3D G3DSA:3.10.180.10 1 130 4.8E-30 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS11035 aa0360162c8d452ee068f44f3137f18d 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 119 2.9E-10 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLI_RS11035 aa0360162c8d452ee068f44f3137f18d 137 SUPERFAMILY SSF54593 1 122 1.13E-22 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS12660 5d6603ad15cdbd5e2a02bc462f711291 239 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 39 236 5.2E-53 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CLI_RS12660 5d6603ad15cdbd5e2a02bc462f711291 239 SUPERFAMILY SSF64438 33 237 9.16E-58 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic CLI_RS12660 5d6603ad15cdbd5e2a02bc462f711291 239 Gene3D G3DSA:3.60.140.10 18 238 3.7E-59 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CLI_RS12660 5d6603ad15cdbd5e2a02bc462f711291 239 PANTHER PTHR30616 42 238 3.3E-77 T 23-04-2016 CLI_RS12660 5d6603ad15cdbd5e2a02bc462f711291 239 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 15 234 3.3E-56 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CLI_RS10750 a2710a9d48bb6cd4f23c09a3581704c1 255 Pfam PF00005 ABC transporter 25 172 1.8E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS10750 a2710a9d48bb6cd4f23c09a3581704c1 255 SMART SM00382 33 221 7.7E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS10750 a2710a9d48bb6cd4f23c09a3581704c1 255 Gene3D G3DSA:3.40.50.300 2 224 4.7E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10750 a2710a9d48bb6cd4f23c09a3581704c1 255 SUPERFAMILY SSF52540 4 225 1.46E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10750 a2710a9d48bb6cd4f23c09a3581704c1 255 PANTHER PTHR24220:SF342 6 247 6.6E-125 T 23-04-2016 CLI_RS10750 a2710a9d48bb6cd4f23c09a3581704c1 255 PANTHER PTHR24220 6 247 6.6E-125 T 23-04-2016 CLI_RS18010 7296ff706a0590634d3fc040b0a6795e 175 PIRSF PIRSF015034 1 175 3.1E-62 T 23-04-2016 IPR025542 YacH protein CLI_RS18010 7296ff706a0590634d3fc040b0a6795e 175 PANTHER PTHR38430 2 175 2.3E-55 T 23-04-2016 CLI_RS18010 7296ff706a0590634d3fc040b0a6795e 175 Gene3D G3DSA:4.10.860.10 135 169 5.2E-6 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS18010 7296ff706a0590634d3fc040b0a6795e 175 Pfam PF02151 UvrB/uvrC motif 137 170 3.6E-9 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS18010 7296ff706a0590634d3fc040b0a6795e 175 SUPERFAMILY SSF46600 137 170 3.01E-6 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS01645 eeaf8127425c3aa094ca03a51e613dde 201 PANTHER PTHR13887 1 200 4.0E-127 T 23-04-2016 CLI_RS01645 eeaf8127425c3aa094ca03a51e613dde 201 Gene3D G3DSA:3.40.30.10 2 195 1.9E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS01645 eeaf8127425c3aa094ca03a51e613dde 201 SUPERFAMILY SSF52833 1 196 1.9E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS01645 eeaf8127425c3aa094ca03a51e613dde 201 Pfam PF01323 DSBA-like thioredoxin domain 5 193 8.6E-34 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 CLI_RS01645 eeaf8127425c3aa094ca03a51e613dde 201 PANTHER PTHR13887:SF10 1 200 4.0E-127 T 23-04-2016 CLI_RS01580 1573ba94ab29928d39299015033e816d 232 SMART SM00448 2 112 3.7E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01580 1573ba94ab29928d39299015033e816d 232 SUPERFAMILY SSF52172 3 118 2.7E-32 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS01580 1573ba94ab29928d39299015033e816d 232 PANTHER PTHR26402 2 230 1.4E-156 T 23-04-2016 CLI_RS01580 1573ba94ab29928d39299015033e816d 232 Gene3D G3DSA:3.40.50.2300 3 120 5.8E-31 T 23-04-2016 CLI_RS01580 1573ba94ab29928d39299015033e816d 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 3.3E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS01580 1573ba94ab29928d39299015033e816d 232 Gene3D G3DSA:1.10.10.10 126 225 2.5E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01580 1573ba94ab29928d39299015033e816d 232 Pfam PF00072 Response regulator receiver domain 4 112 7.6E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01580 1573ba94ab29928d39299015033e816d 232 PANTHER PTHR26402:SF503 2 230 1.4E-156 T 23-04-2016 CLI_RS01580 1573ba94ab29928d39299015033e816d 232 SUPERFAMILY SSF46894 125 225 8.5E-26 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS01580 1573ba94ab29928d39299015033e816d 232 SMART SM00862 149 224 4.6E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS02665 63fdbb42dab3cb888f7ee21f80fb64b0 360 TIGRFAM TIGR03603 cyclo_dehy_ocin: thiazole/oxazole-forming peptide maturase, SagC family component 30 356 4.5E-132 T 23-04-2016 IPR019892 Thiazole/oxazole-forming peptide maturase, SagC family component CLI_RS02665 63fdbb42dab3cb888f7ee21f80fb64b0 360 SUPERFAMILY SSF69572 173 335 3.53E-7 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLI_RS02665 63fdbb42dab3cb888f7ee21f80fb64b0 360 Gene3D G3DSA:3.40.50.720 171 334 1.2E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS00950 b558e0591c938e9fc6f2f9ae33566c41 84 SUPERFAMILY SSF46689 2 49 6.36E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS00950 b558e0591c938e9fc6f2f9ae33566c41 84 Pfam PF12116 Stage III sporulation protein D 2 81 1.2E-44 T 23-04-2016 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID CLI_RS00950 b558e0591c938e9fc6f2f9ae33566c41 84 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLI_RS00950 b558e0591c938e9fc6f2f9ae33566c41 84 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 80 1.1E-48 T 23-04-2016 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID CLI_RS14730 a15800d20e62fe3f1785547e145e56cb 214 Gene3D G3DSA:3.90.20.20 62 157 1.9E-26 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil CLI_RS14730 a15800d20e62fe3f1785547e145e56cb 214 ProSitePatterns PS01071 grpE protein signature. 169 212 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CLI_RS14730 a15800d20e62fe3f1785547e145e56cb 214 SUPERFAMILY SSF58014 67 159 1.57E-25 T 23-04-2016 CLI_RS14730 a15800d20e62fe3f1785547e145e56cb 214 Gene3D G3DSA:2.30.22.10 159 213 5.3E-19 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 CLI_RS14730 a15800d20e62fe3f1785547e145e56cb 214 Pfam PF01025 GrpE 55 213 7.0E-48 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CLI_RS14730 a15800d20e62fe3f1785547e145e56cb 214 PANTHER PTHR21237 38 213 1.3E-47 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CLI_RS14730 a15800d20e62fe3f1785547e145e56cb 214 Hamap MF_01151 Protein GrpE [grpE]. 22 214 19.156 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CLI_RS14730 a15800d20e62fe3f1785547e145e56cb 214 PRINTS PR00773 GrpE protein signature 88 104 2.4E-25 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CLI_RS14730 a15800d20e62fe3f1785547e145e56cb 214 PRINTS PR00773 GrpE protein signature 193 212 2.4E-25 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CLI_RS14730 a15800d20e62fe3f1785547e145e56cb 214 PRINTS PR00773 GrpE protein signature 116 131 2.4E-25 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CLI_RS14730 a15800d20e62fe3f1785547e145e56cb 214 PRINTS PR00773 GrpE protein signature 166 181 2.4E-25 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CLI_RS14730 a15800d20e62fe3f1785547e145e56cb 214 SUPERFAMILY SSF51064 167 213 1.28E-13 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 CLI_RS14450 ffb76ef79f4963930a07ee5d6d31a000 480 PIRSF PIRSF005353 8 480 2.1E-197 T 23-04-2016 IPR026033 Purine permease PbuG-like CLI_RS14450 ffb76ef79f4963930a07ee5d6d31a000 480 Pfam PF00860 Permease family 34 439 3.5E-40 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS14450 ffb76ef79f4963930a07ee5d6d31a000 480 PANTHER PTHR11119:SF9 17 63 1.1E-165 T 23-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 CLI_RS14450 ffb76ef79f4963930a07ee5d6d31a000 480 PANTHER PTHR11119:SF9 80 467 1.1E-165 T 23-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 CLI_RS14450 ffb76ef79f4963930a07ee5d6d31a000 480 PANTHER PTHR11119 17 63 1.1E-165 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS14450 ffb76ef79f4963930a07ee5d6d31a000 480 PANTHER PTHR11119 80 467 1.1E-165 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PANTHER PTHR22912:SF175 1 302 1.3E-201 T 23-04-2016 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 SUPERFAMILY SSF51905 4 307 2.07E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 5 309 3.6E-113 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 Gene3D G3DSA:3.50.50.60 2 117 3.1E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 298 9.6E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 3.3E-71 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 3.3E-71 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 3.3E-71 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 3.3E-71 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 3.3E-71 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 3.3E-71 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 3.3E-71 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 3.3E-71 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 3.3E-71 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 8.4E-36 T 23-04-2016 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 8.4E-36 T 23-04-2016 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.4E-36 T 23-04-2016 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 8.4E-36 T 23-04-2016 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 8.4E-36 T 23-04-2016 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 Gene3D G3DSA:3.50.50.60 250 310 3.2E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 PANTHER PTHR22912 1 302 1.3E-201 T 23-04-2016 CLI_RS06530 cc38b34463976add2313a855d8246b45 313 Gene3D G3DSA:3.50.50.60 118 231 5.1E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 9 637 0.0 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 176 1.3E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PANTHER PTHR10169 9 637 0.0 T 23-04-2016 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 Gene3D G3DSA:3.30.230.10 222 394 1.6E-74 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 SUPERFAMILY SSF54211 223 393 1.19E-61 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 SMART SM00433 38 630 0.0 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR00418 DNA topoisomerase II family signature 73 86 1.0E-72 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR00418 DNA topoisomerase II family signature 116 130 1.0E-72 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR00418 DNA topoisomerase II family signature 38 53 1.0E-72 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR00418 DNA topoisomerase II family signature 526 538 1.0E-72 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR00418 DNA topoisomerase II family signature 422 436 1.0E-72 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR00418 DNA topoisomerase II family signature 569 585 1.0E-72 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR00418 DNA topoisomerase II family signature 270 283 1.0E-72 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR00418 DNA topoisomerase II family signature 488 504 1.0E-72 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR00418 DNA topoisomerase II family signature 506 523 1.0E-72 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 Gene3D G3DSA:3.40.50.670 406 619 2.0E-99 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR01159 DNA gyrase subunit B signature 606 622 4.0E-79 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR01159 DNA gyrase subunit B signature 376 396 4.0E-79 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR01159 DNA gyrase subunit B signature 314 330 4.0E-79 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR01159 DNA gyrase subunit B signature 590 602 4.0E-79 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR01159 DNA gyrase subunit B signature 362 376 4.0E-79 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR01159 DNA gyrase subunit B signature 472 481 4.0E-79 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR01159 DNA gyrase subunit B signature 9 19 4.0E-79 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR01159 DNA gyrase subunit B signature 198 211 4.0E-79 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR01159 DNA gyrase subunit B signature 222 244 4.0E-79 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 PRINTS PR01159 DNA gyrase subunit B signature 183 198 4.0E-79 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 ProSitePatterns PS00177 DNA topoisomerase II signature. 424 432 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 SMART SM00387 34 178 6.7E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 565 626 3.0E-31 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 Gene3D G3DSA:3.30.565.10 9 220 2.0E-91 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 SUPERFAMILY SSF56719 396 631 9.94E-94 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 Pfam PF00204 DNA gyrase B 223 392 7.0E-63 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 Pfam PF01751 Toprim domain 421 532 3.9E-18 T 23-04-2016 IPR006171 Toprim domain CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 6 637 94.93 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CLI_RS00035 64c8ad6310f8a925b8a7052fcffd3b3d 637 SUPERFAMILY SSF55874 9 220 9.69E-77 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS02460 ca1f0657107664d6198f54a9d008ed1f 152 Pfam PF12681 Glyoxalase-like domain 3 121 2.4E-52 T 23-04-2016 IPR025870 Glyoxalase-like domain CLI_RS02460 ca1f0657107664d6198f54a9d008ed1f 152 SUPERFAMILY SSF54593 1 118 4.63E-18 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS02460 ca1f0657107664d6198f54a9d008ed1f 152 Gene3D G3DSA:3.10.180.10 8 126 4.0E-22 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS01680 f69a645eb4ce50b1a96a524757330253 215 PANTHER PTHR30246 1 215 5.5E-105 T 23-04-2016 CLI_RS01680 f69a645eb4ce50b1a96a524757330253 215 Pfam PF01081 KDPG and KHG aldolase 8 196 1.0E-37 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CLI_RS01680 f69a645eb4ce50b1a96a524757330253 215 SUPERFAMILY SSF51569 3 209 2.56E-57 T 23-04-2016 CLI_RS01680 f69a645eb4ce50b1a96a524757330253 215 Gene3D G3DSA:3.20.20.70 3 212 2.8E-69 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS01680 f69a645eb4ce50b1a96a524757330253 215 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 8 207 2.0E-48 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CLI_RS01680 f69a645eb4ce50b1a96a524757330253 215 PANTHER PTHR30246:SF4 1 215 5.5E-105 T 23-04-2016 CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 455 3.2E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 SMART SM00387 345 457 1.6E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 SUPERFAMILY SSF55874 305 455 1.31E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 296 2.3E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 SMART SM00388 235 300 1.1E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 PANTHER PTHR24423:SF520 168 455 4.5E-69 T 23-04-2016 CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 Gene3D G3DSA:3.30.565.10 305 455 7.7E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 SUPERFAMILY SSF47384 220 296 4.12E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 PRINTS PR01780 Lantibiotic regulatory protein signature 384 400 4.9E-10 T 23-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 PRINTS PR01780 Lantibiotic regulatory protein signature 341 356 4.9E-10 T 23-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 PRINTS PR01780 Lantibiotic regulatory protein signature 244 260 4.9E-10 T 23-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 PRINTS PR01780 Lantibiotic regulatory protein signature 207 221 4.9E-10 T 23-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 PANTHER PTHR24423 168 455 4.5E-69 T 23-04-2016 CLI_RS08150 66186b97fc18acfd4fcaba53728e2989 459 Gene3D G3DSA:1.10.287.130 227 296 3.3E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS03035 885948bdad55c93b1734391a6d957e4c 320 PANTHER PTHR30193 15 320 3.3E-154 T 23-04-2016 CLI_RS03035 885948bdad55c93b1734391a6d957e4c 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 305 1.4E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS03035 885948bdad55c93b1734391a6d957e4c 320 SUPERFAMILY SSF161098 45 308 2.34E-56 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS03035 885948bdad55c93b1734391a6d957e4c 320 Gene3D G3DSA:1.10.3720.10 47 306 1.6E-52 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS03035 885948bdad55c93b1734391a6d957e4c 320 PANTHER PTHR30193:SF10 15 320 3.3E-154 T 23-04-2016 CLI_RS06760 1d7ed1d22f1798dea62c006e30ca7495 71 Gene3D G3DSA:3.30.70.100 1 64 7.4E-21 T 23-04-2016 CLI_RS06760 1d7ed1d22f1798dea62c006e30ca7495 71 PRINTS PR00944 Copper ion binding protein signature 27 40 5.9E-8 T 23-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CLI_RS06760 1d7ed1d22f1798dea62c006e30ca7495 71 PRINTS PR00944 Copper ion binding protein signature 52 65 5.9E-8 T 23-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CLI_RS06760 1d7ed1d22f1798dea62c006e30ca7495 71 PRINTS PR00944 Copper ion binding protein signature 2 14 5.9E-8 T 23-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CLI_RS06760 1d7ed1d22f1798dea62c006e30ca7495 71 PRINTS PR00944 Copper ion binding protein signature 14 27 5.9E-8 T 23-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CLI_RS06760 1d7ed1d22f1798dea62c006e30ca7495 71 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CLI_RS06760 1d7ed1d22f1798dea62c006e30ca7495 71 Pfam PF00403 Heavy-metal-associated domain 7 64 3.4E-15 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS06760 1d7ed1d22f1798dea62c006e30ca7495 71 SUPERFAMILY SSF55008 2 65 2.49E-16 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS10840 4de544ee52740b309e6d375908b45d0d 265 SMART SM00422 3 71 2.3E-4 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS10840 4de544ee52740b309e6d375908b45d0d 265 Pfam PF13411 MerR HTH family regulatory protein 3 64 1.6E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS10840 4de544ee52740b309e6d375908b45d0d 265 Gene3D G3DSA:1.10.1660.10 3 132 1.5E-15 T 23-04-2016 CLI_RS10840 4de544ee52740b309e6d375908b45d0d 265 PANTHER PTHR30204 1 265 1.5E-75 T 23-04-2016 CLI_RS10840 4de544ee52740b309e6d375908b45d0d 265 PANTHER PTHR30204:SF27 1 265 1.5E-75 T 23-04-2016 CLI_RS10840 4de544ee52740b309e6d375908b45d0d 265 SUPERFAMILY SSF46955 3 82 3.2E-12 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 PRINTS PR00419 Adrenodoxin reductase family signature 140 162 5.6E-19 T 23-04-2016 CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 PRINTS PR00419 Adrenodoxin reductase family signature 206 216 5.6E-19 T 23-04-2016 CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 PRINTS PR00419 Adrenodoxin reductase family signature 281 295 5.6E-19 T 23-04-2016 CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 PRINTS PR00419 Adrenodoxin reductase family signature 163 176 5.6E-19 T 23-04-2016 CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 Gene3D G3DSA:3.40.50.720 140 380 6.6E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 SUPERFAMILY SSF46548 5 149 1.57E-35 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 139 445 4.7E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 PANTHER PTHR11938 3 458 8.5E-169 T 23-04-2016 CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 SUPERFAMILY SSF51971 138 390 2.77E-67 T 23-04-2016 CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 Gene3D G3DSA:3.40.50.720 382 458 2.3E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 PANTHER PTHR11938:SF108 3 458 8.5E-169 T 23-04-2016 CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 17 127 2.5E-45 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 Gene3D G3DSA:1.10.1060.10 2 139 6.9E-49 T 23-04-2016 CLI_RS16905 eb4430a5a4a81469a7f3565b9a5b3d96 460 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 14 457 1.5E-181 T 23-04-2016 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 CLI_RS15035 fb6866963204968957f9bbba7e0b8843 233 Gene3D G3DSA:2.60.120.260 25 139 4.2E-10 T 23-04-2016 IPR008979 Galactose-binding domain-like CLI_RS15035 fb6866963204968957f9bbba7e0b8843 233 SUPERFAMILY SSF49785 24 128 2.62E-10 T 23-04-2016 IPR008979 Galactose-binding domain-like CLI_RS07870 b6dad979bec394cad03a01bc41c684c7 395 SUPERFAMILY SSF46689 345 393 1.58E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS07870 b6dad979bec394cad03a01bc41c684c7 395 Pfam PF12833 Helix-turn-helix domain 315 392 3.2E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS07870 b6dad979bec394cad03a01bc41c684c7 395 PANTHER PTHR31862 6 275 7.4E-77 T 23-04-2016 CLI_RS07870 b6dad979bec394cad03a01bc41c684c7 395 SUPERFAMILY SSF51621 1 195 1.13E-72 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLI_RS07870 b6dad979bec394cad03a01bc41c684c7 395 Gene3D G3DSA:1.10.10.60 346 393 1.2E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS07870 b6dad979bec394cad03a01bc41c684c7 395 Gene3D G3DSA:3.20.20.70 1 250 9.1E-110 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS07870 b6dad979bec394cad03a01bc41c684c7 395 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 5 270 1.2E-114 T 23-04-2016 IPR009215 TIM-barrel domain, IGPS-like CLI_RS07870 b6dad979bec394cad03a01bc41c684c7 395 SUPERFAMILY SSF46689 292 343 3.94E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS07870 b6dad979bec394cad03a01bc41c684c7 395 Gene3D G3DSA:1.10.10.60 292 345 1.1E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS07870 b6dad979bec394cad03a01bc41c684c7 395 SMART SM00342 309 392 7.0E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS11315 c4c86c0da49f61d82546583bd0a3ef5f 186 PIRSF PIRSF016661 1 186 8.3E-40 T 23-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CLI_RS11315 c4c86c0da49f61d82546583bd0a3ef5f 186 PANTHER PTHR34295:SF1 1 186 8.4E-55 T 23-04-2016 CLI_RS11315 c4c86c0da49f61d82546583bd0a3ef5f 186 Pfam PF02632 BioY family 35 176 3.7E-31 T 23-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CLI_RS11315 c4c86c0da49f61d82546583bd0a3ef5f 186 PANTHER PTHR34295 1 186 8.4E-55 T 23-04-2016 CLI_RS16250 3f4f83568e3060f86ab4dcc07219247f 297 PANTHER PTHR32329 1 297 1.9E-168 T 23-04-2016 CLI_RS16250 3f4f83568e3060f86ab4dcc07219247f 297 PANTHER PTHR32329:SF2 1 297 1.9E-168 T 23-04-2016 CLI_RS16250 3f4f83568e3060f86ab4dcc07219247f 297 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 2 199 1.2E-52 T 23-04-2016 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLI_RS16330 1629106e83949f9efe75d0e9c51e2b96 254 PANTHER PTHR30589:SF0 1 254 5.1E-102 T 23-04-2016 CLI_RS16330 1629106e83949f9efe75d0e9c51e2b96 254 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 251 2.2E-72 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CLI_RS16330 1629106e83949f9efe75d0e9c51e2b96 254 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 129 141 - T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CLI_RS16330 1629106e83949f9efe75d0e9c51e2b96 254 PANTHER PTHR30589 1 254 5.1E-102 T 23-04-2016 CLI_RS16330 1629106e83949f9efe75d0e9c51e2b96 254 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 251 17.226 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CLI_RS16330 1629106e83949f9efe75d0e9c51e2b96 254 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 245 4.5E-75 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CLI_RS00430 64805280bbcafe3b1a4e9bf8a88070b1 56 PRINTS PR00354 7Fe ferredoxin signature 17 27 4.7E-5 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 CLI_RS00430 64805280bbcafe3b1a4e9bf8a88070b1 56 PRINTS PR00354 7Fe ferredoxin signature 33 50 4.7E-5 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 CLI_RS00430 64805280bbcafe3b1a4e9bf8a88070b1 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS00430 64805280bbcafe3b1a4e9bf8a88070b1 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS00430 64805280bbcafe3b1a4e9bf8a88070b1 56 SUPERFAMILY SSF54862 3 54 2.33E-18 T 23-04-2016 CLI_RS00430 64805280bbcafe3b1a4e9bf8a88070b1 56 PANTHER PTHR24960:SF38 1 50 1.1E-12 T 23-04-2016 CLI_RS00430 64805280bbcafe3b1a4e9bf8a88070b1 56 PANTHER PTHR24960 1 50 1.1E-12 T 23-04-2016 CLI_RS00430 64805280bbcafe3b1a4e9bf8a88070b1 56 Pfam PF12838 4Fe-4S dicluster domain 8 52 1.9E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS00430 64805280bbcafe3b1a4e9bf8a88070b1 56 Gene3D G3DSA:3.30.70.20 5 53 1.2E-17 T 23-04-2016 CLI_RS17570 584f7dc4e36c38932fc0e8e8e74a490b 303 PANTHER PTHR23406 1 297 1.4E-21 T 23-04-2016 CLI_RS17570 584f7dc4e36c38932fc0e8e8e74a490b 303 PANTHER PTHR23406:SF1 1 297 1.4E-21 T 23-04-2016 CLI_RS17570 584f7dc4e36c38932fc0e8e8e74a490b 303 SUPERFAMILY SSF53659 4 298 2.54E-68 T 23-04-2016 CLI_RS17570 584f7dc4e36c38932fc0e8e8e74a490b 303 Pfam PF01515 Phosphate acetyl/butaryl transferase 76 295 6.4E-66 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CLI_RS17570 584f7dc4e36c38932fc0e8e8e74a490b 303 Gene3D G3DSA:3.40.50.10750 112 270 7.5E-49 T 23-04-2016 CLI_RS17570 584f7dc4e36c38932fc0e8e8e74a490b 303 PIRSF PIRSF000428 1 302 4.0E-98 T 23-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CLI_RS17570 584f7dc4e36c38932fc0e8e8e74a490b 303 TIGRFAM TIGR02706 P_butyryltrans: phosphate butyryltransferase 5 298 7.4E-146 T 23-04-2016 IPR014079 Phosphate butyryltransferase GO:0016740|GO:0019605|GO:0050182 KEGG: 00650+2.3.1.19 CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 116 3.8E-13 T 23-04-2016 CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 SUPERFAMILY SSF54211 191 326 4.93E-34 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 Gene3D G3DSA:3.30.230.10 203 325 1.1E-36 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 SMART SM01340 209 327 2.3E-49 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 Pfam PF08676 MutL C terminal dimerisation domain 479 622 1.4E-43 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 2.8E-96 T 23-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 SUPERFAMILY SSF55874 3 214 6.42E-49 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 Gene3D G3DSA:3.30.565.10 3 202 4.7E-68 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 23-04-2016 IPR014762 DNA mismatch repair, conserved site CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 325 2.2E-36 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 PANTHER PTHR10073 4 666 2.5E-170 T 23-04-2016 CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 SUPERFAMILY SSF118116 478 664 1.1E-53 T 23-04-2016 CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 SMART SM00853 480 622 2.2E-48 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CLI_RS08770 17f811218cf927a30f7323d3a298300d 666 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 662 26.243 T 23-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CLI_RS13325 fa9bd94257e836f7ab07cc01a119980d 262 PANTHER PTHR34982 1 261 1.1E-73 T 23-04-2016 CLI_RS13325 fa9bd94257e836f7ab07cc01a119980d 262 Pfam PF02108 Flagellar assembly protein FliH 128 253 9.9E-8 T 23-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CLI_RS13325 fa9bd94257e836f7ab07cc01a119980d 262 PANTHER PTHR34982:SF1 1 261 1.1E-73 T 23-04-2016 CLI_RS03795 2d82e856135a73e1130210a0613db700 564 Pfam PF06100 MCRA family 18 509 6.5E-213 T 23-04-2016 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 UniPathway: UPA00199 CLI_RS03795 2d82e856135a73e1130210a0613db700 564 PANTHER PTHR37417 7 534 6.0E-217 T 23-04-2016 CLI_RS03795 2d82e856135a73e1130210a0613db700 564 PANTHER PTHR37417:SF1 7 534 6.0E-217 T 23-04-2016 CLI_RS03795 2d82e856135a73e1130210a0613db700 564 SUPERFAMILY SSF51905 23 287 6.48E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS03795 2d82e856135a73e1130210a0613db700 564 Gene3D G3DSA:3.40.50.720 207 305 4.5E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS03795 2d82e856135a73e1130210a0613db700 564 Gene3D G3DSA:3.40.50.720 23 115 4.5E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS09475 57f8f594e4b924e20ac6e02216da91dd 408 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 4 404 2.7E-159 T 23-04-2016 IPR014219 Peptidase S55, sporulation stage IV, protein B CLI_RS09475 57f8f594e4b924e20ac6e02216da91dd 408 Gene3D G3DSA:2.30.42.10 89 184 1.1E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS09475 57f8f594e4b924e20ac6e02216da91dd 408 Pfam PF13180 PDZ domain 125 181 2.9E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS09475 57f8f594e4b924e20ac6e02216da91dd 408 Pfam PF05580 SpoIVB peptidase S55 190 399 1.6E-88 T 23-04-2016 IPR008763 Peptidase S55, SpoIVB CLI_RS09475 57f8f594e4b924e20ac6e02216da91dd 408 PANTHER PTHR22939 127 237 5.4E-15 T 23-04-2016 CLI_RS09475 57f8f594e4b924e20ac6e02216da91dd 408 SUPERFAMILY SSF50156 102 183 3.42E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS09475 57f8f594e4b924e20ac6e02216da91dd 408 SMART SM00228 99 174 1.4E-4 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS09905 fe77b75245fc8fd8bd60d63aa963b159 331 SUPERFAMILY SSF52058 85 316 6.29E-40 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS09905 fe77b75245fc8fd8bd60d63aa963b159 331 PANTHER PTHR24365 123 313 3.1E-34 T 23-04-2016 CLI_RS09905 fe77b75245fc8fd8bd60d63aa963b159 331 Gene3D G3DSA:3.80.10.10 94 194 1.0E-16 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS09905 fe77b75245fc8fd8bd60d63aa963b159 331 Pfam PF12799 Leucine Rich repeats (2 copies) 167 206 1.3E-7 T 23-04-2016 IPR025875 Leucine rich repeat 4 CLI_RS09905 fe77b75245fc8fd8bd60d63aa963b159 331 SMART SM00365 232 253 530.0 T 23-04-2016 CLI_RS09905 fe77b75245fc8fd8bd60d63aa963b159 331 SMART SM00365 166 187 2.9 T 23-04-2016 CLI_RS09905 fe77b75245fc8fd8bd60d63aa963b159 331 SMART SM00365 210 231 0.1 T 23-04-2016 CLI_RS09905 fe77b75245fc8fd8bd60d63aa963b159 331 SMART SM00365 254 275 130.0 T 23-04-2016 CLI_RS09905 fe77b75245fc8fd8bd60d63aa963b159 331 SMART SM00365 188 209 0.35 T 23-04-2016 CLI_RS09905 fe77b75245fc8fd8bd60d63aa963b159 331 Gene3D G3DSA:3.80.10.10 195 319 4.4E-28 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS02250 eb2e7fb5667303eefa0dffd1a949c212 201 Gene3D G3DSA:3.40.50.880 4 199 3.1E-52 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS02250 eb2e7fb5667303eefa0dffd1a949c212 201 Pfam PF01965 DJ-1/PfpI family 4 167 9.4E-25 T 23-04-2016 IPR002818 DJ-1/PfpI CLI_RS02250 eb2e7fb5667303eefa0dffd1a949c212 201 SUPERFAMILY SSF52317 4 187 8.84E-43 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS02250 eb2e7fb5667303eefa0dffd1a949c212 201 PANTHER PTHR11019 4 158 1.1E-42 T 23-04-2016 CLI_RS02250 eb2e7fb5667303eefa0dffd1a949c212 201 PANTHER PTHR11019:SF124 4 158 1.1E-42 T 23-04-2016 CLI_RS00425 7a0534532a107c7d0c891c7f5a71c668 67 Gene3D G3DSA:3.30.70.100 2 66 8.7E-11 T 23-04-2016 CLI_RS00425 7a0534532a107c7d0c891c7f5a71c668 67 SUPERFAMILY SSF55008 1 66 9.69E-12 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS00425 7a0534532a107c7d0c891c7f5a71c668 67 Pfam PF00403 Heavy-metal-associated domain 17 65 1.8E-6 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLI_RS13980 811c508b04308ea652f361e91decabb6 272 Pfam PF05857 TraX protein 8 266 1.7E-37 T 23-04-2016 IPR008875 TraX CLI_RS09510 3b30541b903cb694ee15424935d73f7e 273 SUPERFAMILY SSF55174 5 71 7.95E-12 T 23-04-2016 CLI_RS09510 3b30541b903cb694ee15424935d73f7e 273 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 238 2.4E-86 T 23-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 CLI_RS09510 3b30541b903cb694ee15424935d73f7e 273 PANTHER PTHR32319 1 263 8.0E-141 T 23-04-2016 CLI_RS09510 3b30541b903cb694ee15424935d73f7e 273 Pfam PF01479 S4 domain 6 50 1.9E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS09510 3b30541b903cb694ee15424935d73f7e 273 Gene3D G3DSA:3.10.290.10 6 105 3.0E-21 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS09510 3b30541b903cb694ee15424935d73f7e 273 PANTHER PTHR32319:SF0 1 263 8.0E-141 T 23-04-2016 CLI_RS09510 3b30541b903cb694ee15424935d73f7e 273 SUPERFAMILY SSF53335 55 249 6.06E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS09510 3b30541b903cb694ee15424935d73f7e 273 Pfam PF01728 FtsJ-like methyltransferase 62 241 2.9E-18 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CLI_RS09510 3b30541b903cb694ee15424935d73f7e 273 PIRSF PIRSF005578 1 265 5.1E-103 T 23-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 CLI_RS09510 3b30541b903cb694ee15424935d73f7e 273 SMART SM00363 6 69 7.6E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS03545 e36f35623a8645f7691f897151c878d3 328 PANTHER PTHR23131 146 325 7.7E-117 T 23-04-2016 CLI_RS03545 e36f35623a8645f7691f897151c878d3 328 PANTHER PTHR23131 12 128 7.7E-117 T 23-04-2016 CLI_RS03545 e36f35623a8645f7691f897151c878d3 328 PANTHER PTHR23131:SF4 146 325 7.7E-117 T 23-04-2016 CLI_RS03545 e36f35623a8645f7691f897151c878d3 328 PANTHER PTHR23131:SF4 12 128 7.7E-117 T 23-04-2016 CLI_RS03545 e36f35623a8645f7691f897151c878d3 328 Pfam PF00753 Metallo-beta-lactamase superfamily 24 204 1.5E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS03545 e36f35623a8645f7691f897151c878d3 328 SUPERFAMILY SSF56281 21 324 5.24E-52 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS03545 e36f35623a8645f7691f897151c878d3 328 SMART SM00849 22 231 2.2E-24 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS03545 e36f35623a8645f7691f897151c878d3 328 Gene3D G3DSA:3.60.15.10 9 258 2.8E-39 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 Pfam PF00512 His Kinase A (phospho-acceptor) domain 124 188 5.2E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 PANTHER PTHR24423 101 339 1.0E-52 T 23-04-2016 CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 PANTHER PTHR24423 16 27 1.0E-52 T 23-04-2016 CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 339 6.4E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 Gene3D G3DSA:1.10.287.130 118 175 3.7E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 SUPERFAMILY SSF55874 178 339 1.44E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 SMART SM00388 122 188 2.8E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 Gene3D G3DSA:3.30.565.10 176 339 1.2E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 SMART SM00387 233 343 6.1E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 SUPERFAMILY SSF47384 106 189 1.69E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 3.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 321 3.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 340 3.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS03745 f0713806534421aa61c87647ea9653f5 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 3.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS13245 5d3f1acb1f7129876e1dd083e4841524 408 SMART SM00962 212 403 8.9E-65 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS13245 5d3f1acb1f7129876e1dd083e4841524 408 PANTHER PTHR11564:SF3 96 405 3.2E-84 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CLI_RS13245 5d3f1acb1f7129876e1dd083e4841524 408 Pfam PF00448 SRP54-type protein, GTPase domain 213 402 1.0E-43 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS13245 5d3f1acb1f7129876e1dd083e4841524 408 SMART SM00382 211 358 2.3E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS13245 5d3f1acb1f7129876e1dd083e4841524 408 SUPERFAMILY SSF52540 211 403 3.2E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13245 5d3f1acb1f7129876e1dd083e4841524 408 PANTHER PTHR11564 96 405 3.2E-84 T 23-04-2016 CLI_RS13245 5d3f1acb1f7129876e1dd083e4841524 408 Gene3D G3DSA:1.10.601.10 69 187 9.4E-4 T 23-04-2016 CLI_RS13245 5d3f1acb1f7129876e1dd083e4841524 408 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 299 3.7E-78 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CLI_RS13245 5d3f1acb1f7129876e1dd083e4841524 408 Gene3D G3DSA:3.40.50.300 224 403 3.0E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13245 5d3f1acb1f7129876e1dd083e4841524 408 Gene3D G3DSA:1.20.120.140 188 223 3.1E-5 T 23-04-2016 CLI_RS12635 b51b1061f5839da0a001cb1641007e6e 294 SUPERFAMILY SSF161098 10 281 3.64E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS12635 b51b1061f5839da0a001cb1641007e6e 294 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 7 287 2.8E-81 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CLI_RS12635 b51b1061f5839da0a001cb1641007e6e 294 Gene3D G3DSA:1.10.3720.10 56 287 6.0E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS12635 b51b1061f5839da0a001cb1641007e6e 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 287 1.0E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS12635 b51b1061f5839da0a001cb1641007e6e 294 PANTHER PTHR30425:SF0 1 293 3.2E-117 T 23-04-2016 CLI_RS12635 b51b1061f5839da0a001cb1641007e6e 294 PANTHER PTHR30425 1 293 3.2E-117 T 23-04-2016 CLI_RS03405 98347f12d5ff5614dbc10ca886291fa1 94 Pfam PF14898 Domain of unknown function (DUF4491) 2 93 2.5E-39 T 23-04-2016 IPR027890 Protein of unknown function DUF4491 CLI_RS09930 63bf4032adb8a0080caa5fea95c3d5e8 423 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 8.1E-16 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS09930 63bf4032adb8a0080caa5fea95c3d5e8 423 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 8.1E-16 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS09930 63bf4032adb8a0080caa5fea95c3d5e8 423 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 8.1E-16 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS09930 63bf4032adb8a0080caa5fea95c3d5e8 423 PRINTS PR00173 Glutamate-aspartate symporter signature 140 162 8.1E-16 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS09930 63bf4032adb8a0080caa5fea95c3d5e8 423 PRINTS PR00173 Glutamate-aspartate symporter signature 352 372 8.1E-16 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS09930 63bf4032adb8a0080caa5fea95c3d5e8 423 Pfam PF00375 Sodium:dicarboxylate symporter family 16 397 2.0E-100 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS09930 63bf4032adb8a0080caa5fea95c3d5e8 423 SUPERFAMILY SSF118215 15 397 3.92E-88 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS09930 63bf4032adb8a0080caa5fea95c3d5e8 423 PANTHER PTHR11958 1 421 1.3E-257 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS09930 63bf4032adb8a0080caa5fea95c3d5e8 423 Gene3D G3DSA:1.10.3860.10 7 403 3.5E-85 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS09930 63bf4032adb8a0080caa5fea95c3d5e8 423 PANTHER PTHR11958:SF61 1 421 1.3E-257 T 23-04-2016 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 Gene3D G3DSA:1.10.601.10 33 126 1.0E-29 T 23-04-2016 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 PANTHER PTHR30376 7 235 3.7E-81 T 23-04-2016 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 82 95 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 SUPERFAMILY SSF88659 139 233 3.74E-23 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 PRINTS PR00046 Major sigma-70 factor signature 201 216 1.9E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 PRINTS PR00046 Major sigma-70 factor signature 216 227 1.9E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 PRINTS PR00046 Major sigma-70 factor signature 180 192 1.9E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 PRINTS PR00046 Major sigma-70 factor signature 82 95 1.9E-12 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 PIRSF PIRSF000770 8 235 2.0E-69 T 23-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 SUPERFAMILY SSF88946 25 127 3.3E-34 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 Pfam PF04542 Sigma-70 region 2 58 127 2.6E-17 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 201 227 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 Pfam PF04545 Sigma-70, region 4 176 229 8.0E-16 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 Gene3D G3DSA:1.10.10.10 173 232 2.8E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 3 235 2.8E-127 T 23-04-2016 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12680 1392bfe7767e3ab5c90222754272e72d 235 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 55 230 1.1E-33 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS00515 80edfcff23d9841145e3ca56b411ba3d 501 Pfam PF04286 Protein of unknown function (DUF445) 8 501 7.9E-66 T 23-04-2016 IPR007383 Protein of unknown function DUF445 CLI_RS00515 80edfcff23d9841145e3ca56b411ba3d 501 PANTHER PTHR35791:SF1 195 323 1.3E-67 T 23-04-2016 CLI_RS00515 80edfcff23d9841145e3ca56b411ba3d 501 PANTHER PTHR35791:SF1 1 163 1.3E-67 T 23-04-2016 CLI_RS00515 80edfcff23d9841145e3ca56b411ba3d 501 PANTHER PTHR35791:SF1 388 501 1.3E-67 T 23-04-2016 CLI_RS00515 80edfcff23d9841145e3ca56b411ba3d 501 PANTHER PTHR35791 195 323 1.3E-67 T 23-04-2016 CLI_RS00515 80edfcff23d9841145e3ca56b411ba3d 501 PANTHER PTHR35791 1 163 1.3E-67 T 23-04-2016 CLI_RS00515 80edfcff23d9841145e3ca56b411ba3d 501 PANTHER PTHR35791 388 501 1.3E-67 T 23-04-2016 CLI_RS07100 6b96988f338f9fb42600bce884d1f083 262 Gene3D G3DSA:1.10.3470.10 58 261 9.3E-9 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS07100 6b96988f338f9fb42600bce884d1f083 262 PANTHER PTHR30477:SF0 1 262 2.6E-79 T 23-04-2016 CLI_RS07100 6b96988f338f9fb42600bce884d1f083 262 Pfam PF00950 ABC 3 transport family 3 258 5.8E-61 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 CLI_RS07100 6b96988f338f9fb42600bce884d1f083 262 PANTHER PTHR30477 1 262 2.6E-79 T 23-04-2016 CLI_RS07100 6b96988f338f9fb42600bce884d1f083 262 SUPERFAMILY SSF81345 2 256 3.14E-30 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS08945 04c5f9f4c3b2fe4be4e9f948a14f6f1d 357 PANTHER PTHR30149:SF0 1 356 8.2E-201 T 23-04-2016 CLI_RS08945 04c5f9f4c3b2fe4be4e9f948a14f6f1d 357 Pfam PF01924 Hydrogenase formation hypA family 8 353 2.5E-134 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 CLI_RS08945 04c5f9f4c3b2fe4be4e9f948a14f6f1d 357 PANTHER PTHR30149 1 356 8.2E-201 T 23-04-2016 CLI_RS08945 04c5f9f4c3b2fe4be4e9f948a14f6f1d 357 PIRSF PIRSF005622 1 357 4.5E-130 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 CLI_RS08945 04c5f9f4c3b2fe4be4e9f948a14f6f1d 357 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 5 355 3.4E-123 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 Gene3D G3DSA:3.40.50.300 834 993 3.9E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 Gene3D G3DSA:3.40.50.300 494 642 3.9E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 Gene3D G3DSA:3.40.50.300 345 481 5.0E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 Gene3D G3DSA:3.40.50.300 5 163 5.0E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 PANTHER PTHR11070 310 421 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 PANTHER PTHR11070 447 549 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 PANTHER PTHR11070 3 174 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 PANTHER PTHR11070 572 881 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 PANTHER PTHR11070 914 1270 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 450 1277 2.2E-264 T 23-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 Pfam PF13361 UvrD-like helicase C-terminal domain 491 936 2.4E-34 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 SUPERFAMILY SSF52980 1067 1272 8.04E-38 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 PANTHER PTHR11070:SF14 310 421 0.0 T 23-04-2016 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 PANTHER PTHR11070:SF14 447 549 0.0 T 23-04-2016 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 PANTHER PTHR11070:SF14 3 174 0.0 T 23-04-2016 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 PANTHER PTHR11070:SF14 572 881 0.0 T 23-04-2016 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 PANTHER PTHR11070:SF14 914 1270 0.0 T 23-04-2016 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 SUPERFAMILY SSF52540 335 420 2.6E-112 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 SUPERFAMILY SSF52540 449 519 2.6E-112 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 SUPERFAMILY SSF52540 726 873 2.6E-112 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 SUPERFAMILY SSF52540 915 941 2.6E-112 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 SUPERFAMILY SSF52540 549 691 2.6E-112 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 SUPERFAMILY SSF52540 4 175 2.6E-112 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 479 1.9E-79 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 Gene3D G3DSA:1.10.486.10 649 820 5.8E-26 T 23-04-2016 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1097 1268 2.1E-10 T 23-04-2016 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 3 1278 18.672 T 23-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 CLI_RS02435 d09b269b1e77bc1e69ce3c3a031736b8 1279 Gene3D G3DSA:3.90.320.10 1056 1276 1.9E-31 T 23-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CLI_RS15340 f8e3372bb34a85a6d66ee101b59028dd 52 PIRSF PIRSF000071 1 52 2.7E-27 T 23-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 CLI_RS15340 f8e3372bb34a85a6d66ee101b59028dd 52 PRINTS PR00163 Rubredoxin signature 3 19 4.3E-12 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 CLI_RS15340 f8e3372bb34a85a6d66ee101b59028dd 52 PRINTS PR00163 Rubredoxin signature 33 49 4.3E-12 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 CLI_RS15340 f8e3372bb34a85a6d66ee101b59028dd 52 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 23-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 CLI_RS15340 f8e3372bb34a85a6d66ee101b59028dd 52 SUPERFAMILY SSF57802 1 51 2.69E-23 T 23-04-2016 CLI_RS15340 f8e3372bb34a85a6d66ee101b59028dd 52 Pfam PF00301 Rubredoxin 3 49 8.8E-25 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 CLI_RS15340 f8e3372bb34a85a6d66ee101b59028dd 52 Gene3D G3DSA:2.20.28.10 1 50 1.9E-27 T 23-04-2016 IPR004039 Rubredoxin-type fold CLI_RS07015 19bb29fa078f14e43878d9b15b688fcc 302 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 188 205 - T 23-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 CLI_RS07015 19bb29fa078f14e43878d9b15b688fcc 302 PANTHER PTHR10088:SF5 4 300 9.3E-159 T 23-04-2016 CLI_RS07015 19bb29fa078f14e43878d9b15b688fcc 302 Gene3D G3DSA:3.40.50.10490 7 251 2.2E-91 T 23-04-2016 CLI_RS07015 19bb29fa078f14e43878d9b15b688fcc 302 Pfam PF13580 SIS domain 40 168 4.6E-8 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CLI_RS07015 19bb29fa078f14e43878d9b15b688fcc 302 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 5 298 42.595 T 23-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 CLI_RS07015 19bb29fa078f14e43878d9b15b688fcc 302 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 9 298 3.1E-130 T 23-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 CLI_RS07015 19bb29fa078f14e43878d9b15b688fcc 302 SUPERFAMILY SSF53697 8 250 2.05E-74 T 23-04-2016 CLI_RS07015 19bb29fa078f14e43878d9b15b688fcc 302 PANTHER PTHR10088 4 300 9.3E-159 T 23-04-2016 CLI_RS07280 16176af8ffbb912fc8f0792da8e6420d 240 Gene3D G3DSA:3.90.640.20 151 235 8.1E-19 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 CLI_RS07280 16176af8ffbb912fc8f0792da8e6420d 240 Gene3D G3DSA:3.30.565.40 53 148 1.7E-15 T 23-04-2016 IPR025303 Domain of unknown function DUF4163 CLI_RS07280 16176af8ffbb912fc8f0792da8e6420d 240 Pfam PF11738 Protein of unknown function (DUF3298) 151 223 1.3E-17 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 CLI_RS09680 1de1710f53ad77e285b35670ff0b5970 246 Gene3D G3DSA:3.30.70.660 108 243 6.8E-46 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS09680 1de1710f53ad77e285b35670ff0b5970 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 32.787 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS09680 1de1710f53ad77e285b35670ff0b5970 246 Pfam PF01416 tRNA pseudouridine synthase 9 84 1.1E-5 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS09680 1de1710f53ad77e285b35670ff0b5970 246 Pfam PF01416 tRNA pseudouridine synthase 144 246 4.6E-25 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS09680 1de1710f53ad77e285b35670ff0b5970 246 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 239 8.0E-57 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS09680 1de1710f53ad77e285b35670ff0b5970 246 Gene3D G3DSA:3.30.70.580 1 105 1.0E-31 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS09680 1de1710f53ad77e285b35670ff0b5970 246 PANTHER PTHR11142 1 246 2.2E-179 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS09680 1de1710f53ad77e285b35670ff0b5970 246 PANTHER PTHR11142:SF8 1 246 2.2E-179 T 23-04-2016 CLI_RS09680 1de1710f53ad77e285b35670ff0b5970 246 SUPERFAMILY SSF55120 1 245 2.59E-75 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS09680 1de1710f53ad77e285b35670ff0b5970 246 PIRSF PIRSF001430 1 246 4.9E-74 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS03015 08c78235c3c07b062285a2ff24625c8c 126 Gene3D G3DSA:1.10.10.10 2 75 3.5E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03015 08c78235c3c07b062285a2ff24625c8c 126 SUPERFAMILY SSF46785 4 81 3.68E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03015 08c78235c3c07b062285a2ff24625c8c 126 SMART SM00345 15 74 1.9E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS03015 08c78235c3c07b062285a2ff24625c8c 126 PANTHER PTHR38445 1 122 1.6E-24 T 23-04-2016 CLI_RS03015 08c78235c3c07b062285a2ff24625c8c 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.7E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS03015 08c78235c3c07b062285a2ff24625c8c 126 PANTHER PTHR38445:SF2 1 122 1.6E-24 T 23-04-2016 CLI_RS17485 f7ca6661c812cee1a1fa8ad7cd6bd3c6 608 Gene3D G3DSA:3.40.50.10490 243 442 3.0E-66 T 23-04-2016 CLI_RS17485 f7ca6661c812cee1a1fa8ad7cd6bd3c6 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 40.425 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CLI_RS17485 f7ca6661c812cee1a1fa8ad7cd6bd3c6 608 SUPERFAMILY SSF56235 2 234 5.66E-74 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS17485 f7ca6661c812cee1a1fa8ad7cd6bd3c6 608 PANTHER PTHR10937 1 608 0.0 T 23-04-2016 CLI_RS17485 f7ca6661c812cee1a1fa8ad7cd6bd3c6 608 Gene3D G3DSA:3.60.20.10 2 239 2.8E-81 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS17485 f7ca6661c812cee1a1fa8ad7cd6bd3c6 608 PANTHER PTHR10937:SF0 1 608 0.0 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CLI_RS17485 f7ca6661c812cee1a1fa8ad7cd6bd3c6 608 Gene3D G3DSA:3.40.50.10490 443 608 1.0E-63 T 23-04-2016 CLI_RS17485 f7ca6661c812cee1a1fa8ad7cd6bd3c6 608 Pfam PF13522 Glutamine amidotransferase domain 64 191 2.5E-21 T 23-04-2016 CLI_RS17485 f7ca6661c812cee1a1fa8ad7cd6bd3c6 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 3.4E-248 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CLI_RS17485 f7ca6661c812cee1a1fa8ad7cd6bd3c6 608 Pfam PF01380 SIS domain 291 415 2.0E-31 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CLI_RS17485 f7ca6661c812cee1a1fa8ad7cd6bd3c6 608 Pfam PF01380 SIS domain 461 590 8.0E-24 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CLI_RS17485 f7ca6661c812cee1a1fa8ad7cd6bd3c6 608 SUPERFAMILY SSF53697 245 608 2.13E-107 T 23-04-2016 CLI_RS10525 e367a16a71a8dba8b922cbfffaf0a83e 216 PIRSF PIRSF010130 1 216 3.6E-88 T 23-04-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420|UniPathway: UPA00621 CLI_RS10525 e367a16a71a8dba8b922cbfffaf0a83e 216 PANTHER PTHR39453:SF1 2 216 5.9E-105 T 23-04-2016 CLI_RS10525 e367a16a71a8dba8b922cbfffaf0a83e 216 PANTHER PTHR39453 2 216 5.9E-105 T 23-04-2016 CLI_RS10525 e367a16a71a8dba8b922cbfffaf0a83e 216 Pfam PF06130 Phosphate propanoyltransferase 32 110 4.8E-28 T 23-04-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420|UniPathway: UPA00621 CLI_RS10525 e367a16a71a8dba8b922cbfffaf0a83e 216 Pfam PF06130 Phosphate propanoyltransferase 140 206 1.4E-17 T 23-04-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420|UniPathway: UPA00621 CLI_RS11600 126ff2c2fad6368f66cd0116c72f6e04 179 Gene3D G3DSA:1.10.8.10 4 44 1.0E-7 T 23-04-2016 CLI_RS11600 126ff2c2fad6368f66cd0116c72f6e04 179 SUPERFAMILY SSF46934 4 46 5.78E-9 T 23-04-2016 IPR009060 UBA-like GO:0005515 CLI_RS13930 6baf6dbd6c6a291598699a498cf10117 524 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLI_RS13930 6baf6dbd6c6a291598699a498cf10117 524 Gene3D G3DSA:3.40.50.300 3 219 1.2E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13930 6baf6dbd6c6a291598699a498cf10117 524 SMART SM00487 23 223 4.0E-61 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS13930 6baf6dbd6c6a291598699a498cf10117 524 Pfam PF03880 DbpA RNA binding domain 448 519 1.4E-19 T 23-04-2016 IPR005580 DbpA, RNA-binding domain CLI_RS13930 6baf6dbd6c6a291598699a498cf10117 524 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 4 523 42.623 T 23-04-2016 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 CLI_RS13930 6baf6dbd6c6a291598699a498cf10117 524 Pfam PF00271 Helicase conserved C-terminal domain 231 339 1.6E-32 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS13930 6baf6dbd6c6a291598699a498cf10117 524 PANTHER PTHR24031 4 425 9.4E-206 T 23-04-2016 CLI_RS13930 6baf6dbd6c6a291598699a498cf10117 524 PANTHER PTHR24031:SF261 4 425 9.4E-206 T 23-04-2016 CLI_RS13930 6baf6dbd6c6a291598699a498cf10117 524 SMART SM00490 259 340 1.5E-33 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS13930 6baf6dbd6c6a291598699a498cf10117 524 Pfam PF00270 DEAD/DEAH box helicase 29 196 1.2E-53 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLI_RS13930 6baf6dbd6c6a291598699a498cf10117 524 Gene3D G3DSA:3.40.50.300 220 375 1.2E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13930 6baf6dbd6c6a291598699a498cf10117 524 SUPERFAMILY SSF52540 73 361 3.08E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06915 701fef99ec369f6230ecfce3d3d30250 215 Gene3D G3DSA:3.40.1180.10 2 214 9.9E-47 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CLI_RS06915 701fef99ec369f6230ecfce3d3d30250 215 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 3 209 3.1E-32 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CLI_RS06915 701fef99ec369f6230ecfce3d3d30250 215 Pfam PF01255 Putative undecaprenyl diphosphate synthase 10 211 6.1E-40 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CLI_RS06915 701fef99ec369f6230ecfce3d3d30250 215 SUPERFAMILY SSF64005 2 209 4.84E-47 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CLI_RS06915 701fef99ec369f6230ecfce3d3d30250 215 PANTHER PTHR10291 3 215 2.0E-50 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CLI_RS09110 9001f03fa5f8a4b34e5ca5100d1b46e7 248 Pfam PF02616 Segregation and condensation protein ScpA 20 242 6.5E-35 T 23-04-2016 IPR003768 Segregation and condensation protein A CLI_RS09110 9001f03fa5f8a4b34e5ca5100d1b46e7 248 PANTHER PTHR33969:SF2 1 244 6.9E-89 T 23-04-2016 CLI_RS09110 9001f03fa5f8a4b34e5ca5100d1b46e7 248 Hamap MF_01805 Segregation and condensation protein A [scpA]. 3 245 24.559 T 23-04-2016 IPR003768 Segregation and condensation protein A CLI_RS09110 9001f03fa5f8a4b34e5ca5100d1b46e7 248 PANTHER PTHR33969 1 244 6.9E-89 T 23-04-2016 CLI_RS11065 8e9113fb0156f927d7f0b235cbe36ad6 297 Pfam PF02517 CAAX protease self-immunity 138 229 3.8E-16 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 CLI_RS11065 8e9113fb0156f927d7f0b235cbe36ad6 297 PANTHER PTHR39430 15 295 3.1E-43 T 23-04-2016 CLI_RS17335 d43ff515f05f5b04a1994f308200160e 243 SMART SM00481 5 79 2.0E-11 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLI_RS17335 d43ff515f05f5b04a1994f308200160e 243 PANTHER PTHR36928 1 243 4.3E-97 T 23-04-2016 CLI_RS17335 d43ff515f05f5b04a1994f308200160e 243 Gene3D G3DSA:3.20.20.140 3 236 2.1E-56 T 23-04-2016 CLI_RS17335 d43ff515f05f5b04a1994f308200160e 243 SUPERFAMILY SSF89550 4 236 1.96E-56 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CLI_RS17335 d43ff515f05f5b04a1994f308200160e 243 Pfam PF02811 PHP domain 6 148 8.9E-6 T 23-04-2016 IPR004013 PHP domain GO:0003824 CLI_RS17335 d43ff515f05f5b04a1994f308200160e 243 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 243 45.912 T 23-04-2016 IPR023710 Probable phosphatase YcdX GO:0008270 CLI_RS06730 bea507c8c5d60a5225709fa3b519126d 698 PANTHER PTHR39083:SF1 1 697 1.4E-198 T 23-04-2016 CLI_RS06730 bea507c8c5d60a5225709fa3b519126d 698 PANTHER PTHR39083 1 697 1.4E-198 T 23-04-2016 CLI_RS06730 bea507c8c5d60a5225709fa3b519126d 698 Pfam PF03170 Bacterial cellulose synthase subunit 34 600 5.1E-101 T 23-04-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 CLI_RS07590 e3f34cc16720b8950da9d79ce92ffd4b 266 PANTHER PTHR21057 3 266 1.4E-151 T 23-04-2016 CLI_RS07590 e3f34cc16720b8950da9d79ce92ffd4b 266 Pfam PF00793 DAHP synthetase I family 16 265 1.0E-75 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CLI_RS07590 e3f34cc16720b8950da9d79ce92ffd4b 266 PANTHER PTHR21057:SF1 3 266 1.4E-151 T 23-04-2016 CLI_RS07590 e3f34cc16720b8950da9d79ce92ffd4b 266 Gene3D G3DSA:3.20.20.70 12 266 1.9E-95 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS07590 e3f34cc16720b8950da9d79ce92ffd4b 266 SUPERFAMILY SSF51569 5 265 6.04E-97 T 23-04-2016 CLI_RS07590 e3f34cc16720b8950da9d79ce92ffd4b 266 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 9 261 1.3E-112 T 23-04-2016 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CLI_RS00710 980b516cfa3a3674964687e4e25ef1ea 300 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 3 296 6.6E-127 T 23-04-2016 IPR008764 Peptidase U57, YabG CLI_RS00710 980b516cfa3a3674964687e4e25ef1ea 300 PIRSF PIRSF011575 1 300 1.1E-133 T 23-04-2016 IPR008764 Peptidase U57, YabG CLI_RS00710 980b516cfa3a3674964687e4e25ef1ea 300 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 1 288 3.0E-90 T 23-04-2016 IPR008764 Peptidase U57, YabG CLI_RS00710 980b516cfa3a3674964687e4e25ef1ea 300 Pfam PF05582 YabG peptidase U57 3 295 7.8E-122 T 23-04-2016 IPR008764 Peptidase U57, YabG CLI_RS16310 9d1041ad2698b8741be4ef437669b3a0 430 PIRSF PIRSF005353 1 430 1.1E-180 T 23-04-2016 IPR026033 Purine permease PbuG-like CLI_RS16310 9d1041ad2698b8741be4ef437669b3a0 430 PANTHER PTHR11119:SF9 1 406 3.2E-167 T 23-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 CLI_RS16310 9d1041ad2698b8741be4ef437669b3a0 430 Pfam PF00860 Permease family 17 391 1.7E-45 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS16310 9d1041ad2698b8741be4ef437669b3a0 430 PANTHER PTHR11119 1 406 3.2E-167 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS00845 49546109409625d0f2d7e6249534f102 230 PANTHER PTHR11040 1 222 1.4E-41 T 23-04-2016 CLI_RS00845 49546109409625d0f2d7e6249534f102 230 Pfam PF02535 ZIP Zinc transporter 83 225 6.8E-26 T 23-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CLI_RS03765 c9404bc23340b109360f3318c2ebba4a 195 PANTHER PTHR10204 1 156 7.0E-44 T 23-04-2016 CLI_RS03765 c9404bc23340b109360f3318c2ebba4a 195 PANTHER PTHR10204:SF38 1 156 7.0E-44 T 23-04-2016 CLI_RS03765 c9404bc23340b109360f3318c2ebba4a 195 Pfam PF03358 NADPH-dependent FMN reductase 1 107 1.8E-22 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLI_RS03765 c9404bc23340b109360f3318c2ebba4a 195 Gene3D G3DSA:3.40.50.360 1 186 6.6E-40 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS03765 c9404bc23340b109360f3318c2ebba4a 195 SUPERFAMILY SSF52218 1 185 3.44E-33 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS13320 e8ca1dfbd771df53de59de3cd47be3b3 436 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 434 1.6E-191 T 23-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13320 e8ca1dfbd771df53de59de3cd47be3b3 436 SMART SM00382 157 338 1.0E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS13320 e8ca1dfbd771df53de59de3cd47be3b3 436 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 23 434 6.5E-213 T 23-04-2016 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13320 e8ca1dfbd771df53de59de3cd47be3b3 436 PANTHER PTHR15184 1 436 2.6E-261 T 23-04-2016 CLI_RS13320 e8ca1dfbd771df53de59de3cd47be3b3 436 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 88 5.5E-7 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13320 e8ca1dfbd771df53de59de3cd47be3b3 436 Gene3D G3DSA:3.40.50.300 126 402 9.1E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13320 e8ca1dfbd771df53de59de3cd47be3b3 436 SUPERFAMILY SSF52540 93 359 1.17E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13320 e8ca1dfbd771df53de59de3cd47be3b3 436 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 354 3.1E-78 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13320 e8ca1dfbd771df53de59de3cd47be3b3 436 PANTHER PTHR15184:SF9 1 436 2.6E-261 T 23-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS07495 311019ad69ee7df00879d2f25f2e88c3 142 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 2.6E-20 T 23-04-2016 IPR020603 MraZ domain CLI_RS07495 311019ad69ee7df00879d2f25f2e88c3 142 Pfam PF02381 MraZ protein, putative antitoxin-like 72 129 4.5E-18 T 23-04-2016 IPR020603 MraZ domain CLI_RS07495 311019ad69ee7df00879d2f25f2e88c3 142 PANTHER PTHR34701 2 142 8.0E-61 T 23-04-2016 CLI_RS07495 311019ad69ee7df00879d2f25f2e88c3 142 SUPERFAMILY SSF89447 1 131 2.99E-51 T 23-04-2016 CLI_RS07495 311019ad69ee7df00879d2f25f2e88c3 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 54.311 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CLI_RS07495 311019ad69ee7df00879d2f25f2e88c3 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 140 3.2E-49 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CLI_RS07495 311019ad69ee7df00879d2f25f2e88c3 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 137 2.0E-60 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CLI_RS03855 19ce734507c90eeb96d08647a7e1e971 86 PANTHER PTHR36121 1 86 1.9E-35 T 23-04-2016 CLI_RS03855 19ce734507c90eeb96d08647a7e1e971 86 Pfam PF04994 TfoX C-terminal domain 3 78 1.4E-24 T 23-04-2016 IPR007077 TfoX, C-terminal CLI_RS03855 19ce734507c90eeb96d08647a7e1e971 86 Gene3D G3DSA:1.10.150.20 1 84 1.7E-31 T 23-04-2016 CLI_RS03855 19ce734507c90eeb96d08647a7e1e971 86 PANTHER PTHR36121:SF1 1 86 1.9E-35 T 23-04-2016 CLI_RS05275 32f988c931dfede07afb3fd6ba3f8387 465 SUPERFAMILY SSF56176 10 220 1.03E-68 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLI_RS05275 32f988c931dfede07afb3fd6ba3f8387 465 Gene3D G3DSA:3.30.43.10 5 99 3.3E-27 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CLI_RS05275 32f988c931dfede07afb3fd6ba3f8387 465 PANTHER PTHR11748 11 464 7.4E-151 T 23-04-2016 CLI_RS05275 32f988c931dfede07afb3fd6ba3f8387 465 Pfam PF02913 FAD linked oxidases, C-terminal domain 220 463 2.4E-66 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CLI_RS05275 32f988c931dfede07afb3fd6ba3f8387 465 Gene3D G3DSA:3.30.465.10 100 220 1.5E-41 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLI_RS05275 32f988c931dfede07afb3fd6ba3f8387 465 SUPERFAMILY SSF55103 225 464 5.72E-59 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CLI_RS05275 32f988c931dfede07afb3fd6ba3f8387 465 Gene3D G3DSA:1.10.45.10 424 463 1.3E-15 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLI_RS05275 32f988c931dfede07afb3fd6ba3f8387 465 Pfam PF01565 FAD binding domain 45 182 7.3E-43 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CLI_RS05275 32f988c931dfede07afb3fd6ba3f8387 465 PANTHER PTHR11748:SF35 11 464 7.4E-151 T 23-04-2016 CLI_RS07695 795dc072bdb6ddfe2e40a89992831b86 220 Pfam PF02310 B12 binding domain 95 200 3.3E-24 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CLI_RS07695 795dc072bdb6ddfe2e40a89992831b86 220 TIGRFAM TIGR02370 pyl_corrinoid: methyltransferase cognate corrinoid proteins, Methanosarcina family 11 206 3.0E-65 T 23-04-2016 IPR012741 Methyltransferase cognate corrinoid protein GO:0015948|GO:0031419|GO:0050897 CLI_RS07695 795dc072bdb6ddfe2e40a89992831b86 220 Gene3D G3DSA:3.40.50.280 81 217 8.1E-55 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CLI_RS07695 795dc072bdb6ddfe2e40a89992831b86 220 Gene3D G3DSA:1.10.1240.10 5 80 9.4E-20 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLI_RS07695 795dc072bdb6ddfe2e40a89992831b86 220 SUPERFAMILY SSF47644 6 88 4.97E-24 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLI_RS07695 795dc072bdb6ddfe2e40a89992831b86 220 SUPERFAMILY SSF52242 74 217 8.5E-49 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CLI_RS07695 795dc072bdb6ddfe2e40a89992831b86 220 Pfam PF02607 B12 binding domain 9 82 1.2E-17 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLI_RS07695 795dc072bdb6ddfe2e40a89992831b86 220 SMART SM01018 6 89 1.1E-32 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLI_RS03210 a008301c7747f217f2a9ac98ae041b5e 407 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.2E-23 T 23-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS03210 a008301c7747f217f2a9ac98ae041b5e 407 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 196 406 1.8E-77 T 23-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS03210 a008301c7747f217f2a9ac98ae041b5e 407 Pfam PF07670 Nucleoside recognition 94 190 2.4E-8 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS03210 a008301c7747f217f2a9ac98ae041b5e 407 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 406 5.9E-148 T 23-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS03210 a008301c7747f217f2a9ac98ae041b5e 407 PANTHER PTHR10590 1 407 2.1E-225 T 23-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS11250 293ed2f30869fd84376624b0e948372f 85 PIRSF PIRSF002599 1 84 7.0E-13 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 CLI_RS11250 293ed2f30869fd84376624b0e948372f 85 Pfam PF06961 Protein of unknown function (DUF1294) 10 64 4.3E-26 T 23-04-2016 IPR010718 Protein of unknown function DUF1294 CLI_RS11250 293ed2f30869fd84376624b0e948372f 85 PANTHER PTHR12962:SF1 1 82 5.3E-30 T 23-04-2016 CLI_RS11250 293ed2f30869fd84376624b0e948372f 85 PANTHER PTHR12962 1 82 5.3E-30 T 23-04-2016 CLI_RS05220 7d2bd9a8cd136411dba16fb9c65079a7 127 SMART SM00448 6 121 1.2E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS05220 7d2bd9a8cd136411dba16fb9c65079a7 127 Pfam PF00072 Response regulator receiver domain 8 121 4.5E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS05220 7d2bd9a8cd136411dba16fb9c65079a7 127 Gene3D G3DSA:3.40.50.2300 6 124 2.0E-26 T 23-04-2016 CLI_RS05220 7d2bd9a8cd136411dba16fb9c65079a7 127 PANTHER PTHR26402:SF579 6 127 1.3E-45 T 23-04-2016 CLI_RS05220 7d2bd9a8cd136411dba16fb9c65079a7 127 PANTHER PTHR26402 6 127 1.3E-45 T 23-04-2016 CLI_RS05220 7d2bd9a8cd136411dba16fb9c65079a7 127 SUPERFAMILY SSF52172 5 125 1.71E-24 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS12465 34fcb56d119bac4580b4b5e0fd5edbd5 174 PANTHER PTHR38010 1 173 1.5E-29 T 23-04-2016 CLI_RS12465 34fcb56d119bac4580b4b5e0fd5edbd5 174 Gene3D G3DSA:1.20.120.20 82 172 2.5E-4 T 23-04-2016 CLI_RS12485 8f6e299eab59f3a03339b7a5f3f080b6 541 SUPERFAMILY SSF101473 2 200 1.7E-47 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 CLI_RS12485 8f6e299eab59f3a03339b7a5f3f080b6 541 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 541 4.5E-213 T 23-04-2016 IPR019986 DAK2 domain-containing protein YloV CLI_RS12485 8f6e299eab59f3a03339b7a5f3f080b6 541 PANTHER PTHR33434 1 541 5.3E-259 T 23-04-2016 CLI_RS12485 8f6e299eab59f3a03339b7a5f3f080b6 541 Pfam PF02734 DAK2 domain 36 198 1.1E-45 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 CLI_RS12485 8f6e299eab59f3a03339b7a5f3f080b6 541 PANTHER PTHR33434:SF4 1 541 5.3E-259 T 23-04-2016 CLI_RS12485 8f6e299eab59f3a03339b7a5f3f080b6 541 SMART SM01120 36 199 1.0E-71 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 CLI_RS12485 8f6e299eab59f3a03339b7a5f3f080b6 541 SMART SM01121 230 541 6.1E-186 T 23-04-2016 IPR033470 Uncharacterised protein, DhaK domain CLI_RS12485 8f6e299eab59f3a03339b7a5f3f080b6 541 Pfam PF13684 Dihydroxyacetone kinase family 230 541 3.0E-128 T 23-04-2016 IPR033470 Uncharacterised protein, DhaK domain CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 Pfam PF16188 C-terminal region of peptidase_M24 536 596 7.9E-23 T 23-04-2016 IPR032416 Peptidase M24, C-terminal domain CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 Gene3D G3DSA:3.40.350.10 3 124 1.1E-18 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 Gene3D G3DSA:3.40.350.10 171 294 1.8E-11 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 SUPERFAMILY SSF55920 305 562 3.4E-53 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 Pfam PF00557 Metallopeptidase family M24 310 526 1.3E-39 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 SUPERFAMILY SSF53092 169 288 8.55E-5 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 SUPERFAMILY SSF53092 10 132 1.4E-13 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 Pfam PF16189 Creatinase/Prolidase N-terminal domain 149 308 2.1E-49 T 23-04-2016 CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 PANTHER PTHR10804 284 594 3.8E-198 T 23-04-2016 CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 PANTHER PTHR10804 3 181 3.8E-198 T 23-04-2016 CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 Pfam PF01321 Creatinase/Prolidase N-terminal domain 6 131 1.1E-15 T 23-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 Gene3D G3DSA:3.90.230.10 303 563 5.1E-52 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 PANTHER PTHR10804:SF86 284 594 3.8E-198 T 23-04-2016 CLI_RS11335 d60fbf1227fe9562a6c59353210f8387 597 PANTHER PTHR10804:SF86 3 181 3.8E-198 T 23-04-2016 CLI_RS03785 b6adfe4a93bc4b51c52ab3f4c057f3ba 158 Pfam PF07282 Putative transposase DNA-binding domain 93 153 5.1E-17 T 23-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal CLI_RS03785 b6adfe4a93bc4b51c52ab3f4c057f3ba 158 PANTHER PTHR30405:SF4 67 152 9.1E-13 T 23-04-2016 CLI_RS03785 b6adfe4a93bc4b51c52ab3f4c057f3ba 158 PANTHER PTHR30405 67 152 9.1E-13 T 23-04-2016 CLI_RS08760 fea175a13a73b9ddb66d287211f1e01a 85 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 66 30.053 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CLI_RS08760 fea175a13a73b9ddb66d287211f1e01a 85 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 66 4.9E-32 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CLI_RS08760 fea175a13a73b9ddb66d287211f1e01a 85 SUPERFAMILY SSF50182 7 65 4.78E-24 T 23-04-2016 IPR010920 LSM domain CLI_RS08760 fea175a13a73b9ddb66d287211f1e01a 85 Gene3D G3DSA:2.30.30.100 6 73 8.1E-32 T 23-04-2016 CLI_RS08760 fea175a13a73b9ddb66d287211f1e01a 85 PANTHER PTHR34772 2 83 9.4E-38 T 23-04-2016 CLI_RS08760 fea175a13a73b9ddb66d287211f1e01a 85 PANTHER PTHR34772:SF1 2 83 9.4E-38 T 23-04-2016 CLI_RS01370 096e6d4cd4ea4eb89c7df72dd0890873 113 Gene3D G3DSA:1.10.10.10 77 111 3.4E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01370 096e6d4cd4ea4eb89c7df72dd0890873 113 Pfam PF13545 Crp-like helix-turn-helix domain 59 111 1.9E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS01370 096e6d4cd4ea4eb89c7df72dd0890873 113 SUPERFAMILY SSF46785 58 111 2.55E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS13725 41e6aebaab1ac443c028db27c1dacac9 354 PANTHER PTHR21015:SF27 3 352 4.5E-208 T 23-04-2016 CLI_RS13725 41e6aebaab1ac443c028db27c1dacac9 354 PANTHER PTHR21015 3 352 4.5E-208 T 23-04-2016 CLI_RS13725 41e6aebaab1ac443c028db27c1dacac9 354 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 188 345 3.3E-31 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS13725 41e6aebaab1ac443c028db27c1dacac9 354 Gene3D G3DSA:3.40.50.2000 201 329 2.1E-5 T 23-04-2016 CLI_RS13725 41e6aebaab1ac443c028db27c1dacac9 354 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 353 30.448 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS13725 41e6aebaab1ac443c028db27c1dacac9 354 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2 348 7.9E-85 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS13725 41e6aebaab1ac443c028db27c1dacac9 354 Gene3D G3DSA:3.40.50.2000 2 200 9.7E-66 T 23-04-2016 CLI_RS13725 41e6aebaab1ac443c028db27c1dacac9 354 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 141 8.7E-45 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS13725 41e6aebaab1ac443c028db27c1dacac9 354 SUPERFAMILY SSF53756 2 351 7.21E-97 T 23-04-2016 CLI_RS13370 ff27e69d1923818d0a33c4109557251f 397 Gene3D G3DSA:3.90.1260.10 174 395 2.3E-91 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CLI_RS13370 ff27e69d1923818d0a33c4109557251f 397 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 116 127 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CLI_RS13370 ff27e69d1923818d0a33c4109557251f 397 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 8 16 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CLI_RS13370 ff27e69d1923818d0a33c4109557251f 397 SUPERFAMILY SSF52402 2 165 8.8E-45 T 23-04-2016 CLI_RS13370 ff27e69d1923818d0a33c4109557251f 397 PANTHER PTHR11587:SF2 2 396 2.2E-224 T 23-04-2016 CLI_RS13370 ff27e69d1923818d0a33c4109557251f 397 Hamap MF_00005 Argininosuccinate synthase [argG]. 2 397 51.533 T 23-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CLI_RS13370 ff27e69d1923818d0a33c4109557251f 397 TIGRFAM TIGR00032 argG: argininosuccinate synthase 4 392 4.5E-151 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CLI_RS13370 ff27e69d1923818d0a33c4109557251f 397 Pfam PF00764 Arginosuccinate synthase 6 391 2.0E-159 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CLI_RS13370 ff27e69d1923818d0a33c4109557251f 397 Gene3D G3DSA:3.40.50.620 3 172 2.0E-63 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS13370 ff27e69d1923818d0a33c4109557251f 397 SUPERFAMILY SSF69864 171 395 3.01E-89 T 23-04-2016 CLI_RS13370 ff27e69d1923818d0a33c4109557251f 397 PANTHER PTHR11587 2 396 2.2E-224 T 23-04-2016 CLI_RS15070 def87174951482c20ad0c78f2936d3ea 449 Pfam PF00656 Caspase domain 203 399 2.1E-18 T 23-04-2016 CLI_RS15070 def87174951482c20ad0c78f2936d3ea 449 SUPERFAMILY SSF52129 198 391 2.88E-10 T 23-04-2016 IPR029030 Caspase-like domain CLI_RS15070 def87174951482c20ad0c78f2936d3ea 449 ProSitePatterns PS00018 EF-hand calcium-binding domain. 395 407 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site CLI_RS15070 def87174951482c20ad0c78f2936d3ea 449 Gene3D G3DSA:3.40.50.1460 203 434 1.7E-13 T 23-04-2016 IPR029030 Caspase-like domain CLI_RS02270 68d411dd8629c312adb63f0ebc078525 437 Pfam PF08353 Domain of unknown function (DUF1727) 310 420 1.9E-38 T 23-04-2016 IPR013564 Domain of unknown function DUF1727 CLI_RS02270 68d411dd8629c312adb63f0ebc078525 437 Gene3D G3DSA:3.40.1190.10 214 288 1.9E-43 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS02270 68d411dd8629c312adb63f0ebc078525 437 Gene3D G3DSA:3.40.1190.10 27 180 1.9E-43 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS02270 68d411dd8629c312adb63f0ebc078525 437 Pfam PF08245 Mur ligase middle domain 41 270 7.7E-17 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS02270 68d411dd8629c312adb63f0ebc078525 437 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 39 63 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 CLI_RS02270 68d411dd8629c312adb63f0ebc078525 437 PANTHER PTHR23135 244 428 2.2E-165 T 23-04-2016 CLI_RS02270 68d411dd8629c312adb63f0ebc078525 437 PANTHER PTHR23135 17 214 2.2E-165 T 23-04-2016 CLI_RS02270 68d411dd8629c312adb63f0ebc078525 437 PANTHER PTHR23135:SF7 244 428 2.2E-165 T 23-04-2016 CLI_RS02270 68d411dd8629c312adb63f0ebc078525 437 PANTHER PTHR23135:SF7 17 214 2.2E-165 T 23-04-2016 CLI_RS02270 68d411dd8629c312adb63f0ebc078525 437 SUPERFAMILY SSF53623 28 184 3.79E-35 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS02270 68d411dd8629c312adb63f0ebc078525 437 SUPERFAMILY SSF53623 216 287 3.79E-35 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CLI_RS18145 44ba5eeb75cb2c690b22bd4db26aa80c 795 SMART SM00331 578 791 1.4E-26 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLI_RS18145 44ba5eeb75cb2c690b22bd4db26aa80c 795 SUPERFAMILY SSF81606 586 788 4.71E-16 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLI_RS18145 44ba5eeb75cb2c690b22bd4db26aa80c 795 PANTHER PTHR21021 568 791 3.5E-30 T 23-04-2016 CLI_RS18145 44ba5eeb75cb2c690b22bd4db26aa80c 795 PANTHER PTHR21021 182 487 3.5E-30 T 23-04-2016 CLI_RS18145 44ba5eeb75cb2c690b22bd4db26aa80c 795 PANTHER PTHR21021 536 552 3.5E-30 T 23-04-2016 CLI_RS18145 44ba5eeb75cb2c690b22bd4db26aa80c 795 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 606 791 1.9E-30 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLI_RS18145 44ba5eeb75cb2c690b22bd4db26aa80c 795 Gene3D G3DSA:3.60.40.10 707 789 6.6E-10 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLI_RS18145 44ba5eeb75cb2c690b22bd4db26aa80c 795 PANTHER PTHR21021:SF22 568 791 3.5E-30 T 23-04-2016 CLI_RS18145 44ba5eeb75cb2c690b22bd4db26aa80c 795 PANTHER PTHR21021:SF22 182 487 3.5E-30 T 23-04-2016 CLI_RS18145 44ba5eeb75cb2c690b22bd4db26aa80c 795 PANTHER PTHR21021:SF22 536 552 3.5E-30 T 23-04-2016 CLI_RS18145 44ba5eeb75cb2c690b22bd4db26aa80c 795 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 34 792 0.0 T 23-04-2016 IPR014221 Sporulation stage II, protein E KEGG: 04660+3.1.3.16 CLI_RS13705 bc4e8db23adbf87a95757d34e4732726 213 PANTHER PTHR10000:SF10 59 212 7.7E-55 T 23-04-2016 CLI_RS13705 bc4e8db23adbf87a95757d34e4732726 213 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 192 5.0E-33 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CLI_RS13705 bc4e8db23adbf87a95757d34e4732726 213 PANTHER PTHR10000 59 212 7.7E-55 T 23-04-2016 CLI_RS13705 bc4e8db23adbf87a95757d34e4732726 213 Gene3D G3DSA:3.40.50.1000 74 207 2.3E-34 T 23-04-2016 IPR023214 HAD-like domain CLI_RS13705 bc4e8db23adbf87a95757d34e4732726 213 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 190 2.6E-25 T 23-04-2016 CLI_RS13705 bc4e8db23adbf87a95757d34e4732726 213 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 4 203 1.4E-59 T 23-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial CLI_RS13705 bc4e8db23adbf87a95757d34e4732726 213 SUPERFAMILY SSF56784 3 201 2.0E-24 T 23-04-2016 IPR023214 HAD-like domain CLI_RS07050 0ccaabebf17fee2d7b0c2b2933712906 412 PANTHER PTHR30032 1 384 1.8E-161 T 23-04-2016 CLI_RS07050 0ccaabebf17fee2d7b0c2b2933712906 412 Pfam PF04122 Putative cell wall binding repeat 2 64 157 1.2E-5 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS07050 0ccaabebf17fee2d7b0c2b2933712906 412 PANTHER PTHR30032:SF6 1 384 1.8E-161 T 23-04-2016 CLI_RS04910 26137d8c74b75374eb56c264e3f384b6 424 Gene3D G3DSA:1.10.1660.10 1 111 3.7E-24 T 23-04-2016 CLI_RS04910 26137d8c74b75374eb56c264e3f384b6 424 PANTHER PTHR30204:SF27 1 285 4.5E-48 T 23-04-2016 CLI_RS04910 26137d8c74b75374eb56c264e3f384b6 424 SUPERFAMILY SSF46955 1 105 1.42E-19 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS04910 26137d8c74b75374eb56c264e3f384b6 424 PANTHER PTHR30204 1 285 4.5E-48 T 23-04-2016 CLI_RS04910 26137d8c74b75374eb56c264e3f384b6 424 Pfam PF13411 MerR HTH family regulatory protein 1 65 4.7E-18 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04910 26137d8c74b75374eb56c264e3f384b6 424 SMART SM00422 1 69 2.7E-13 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS15865 805862d2ad6eb38d0246d1b660326e40 302 Pfam PF01076 Plasmid recombination enzyme 8 194 7.8E-31 T 23-04-2016 IPR001668 Plasmid recombination enzyme GO:0003677|GO:0005727|GO:0006310 CLI_RS04505 4535d68a1ae9a3d1b700029150fc6d78 171 Gene3D G3DSA:3.30.460.10 2 168 7.6E-64 T 23-04-2016 CLI_RS04505 4535d68a1ae9a3d1b700029150fc6d78 171 PANTHER PTHR34822 1 168 8.3E-62 T 23-04-2016 CLI_RS04505 4535d68a1ae9a3d1b700029150fc6d78 171 SUPERFAMILY SSF81301 5 168 4.25E-56 T 23-04-2016 CLI_RS04505 4535d68a1ae9a3d1b700029150fc6d78 171 Pfam PF04229 GrpB protein 2 162 2.7E-53 T 23-04-2016 IPR007344 GrpB/Dephospho-CoA kinase CLI_RS00560 86c8013d35fb55da69471423bf2eb8dc 231 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS00560 86c8013d35fb55da69471423bf2eb8dc 231 PANTHER PTHR24220:SF578 3 230 5.1E-134 T 23-04-2016 CLI_RS00560 86c8013d35fb55da69471423bf2eb8dc 231 Pfam PF00005 ABC transporter 21 169 1.3E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS00560 86c8013d35fb55da69471423bf2eb8dc 231 SUPERFAMILY SSF52540 1 223 2.45E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00560 86c8013d35fb55da69471423bf2eb8dc 231 SMART SM00382 30 217 4.8E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS00560 86c8013d35fb55da69471423bf2eb8dc 231 PANTHER PTHR24220 3 230 5.1E-134 T 23-04-2016 CLI_RS00560 86c8013d35fb55da69471423bf2eb8dc 231 Gene3D G3DSA:3.40.50.300 2 223 1.7E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05020 1824e6955b9c33da0c0e4dfc375042e9 243 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 4 239 8.4E-91 T 23-04-2016 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 CLI_RS05020 1824e6955b9c33da0c0e4dfc375042e9 243 Gene3D G3DSA:3.30.950.10 112 221 5.0E-9 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 CLI_RS05020 1824e6955b9c33da0c0e4dfc375042e9 243 PANTHER PTHR21091:SF9 1 179 7.0E-57 T 23-04-2016 CLI_RS05020 1824e6955b9c33da0c0e4dfc375042e9 243 Gene3D G3DSA:3.40.1010.10 1 111 2.3E-32 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CLI_RS05020 1824e6955b9c33da0c0e4dfc375042e9 243 PANTHER PTHR21091 1 179 7.0E-57 T 23-04-2016 CLI_RS05020 1824e6955b9c33da0c0e4dfc375042e9 243 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 205 2.3E-39 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS05020 1824e6955b9c33da0c0e4dfc375042e9 243 SUPERFAMILY SSF53790 1 238 1.7E-56 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS03910 278090d9470827b391abdbb53c8768bd 380 PANTHER PTHR11808 1 380 5.7E-205 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS03910 278090d9470827b391abdbb53c8768bd 380 Gene3D G3DSA:3.40.640.10 2 243 1.4E-95 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS03910 278090d9470827b391abdbb53c8768bd 380 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS03910 278090d9470827b391abdbb53c8768bd 380 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 377 3.2E-153 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS03910 278090d9470827b391abdbb53c8768bd 380 Gene3D G3DSA:3.90.1150.10 244 377 2.1E-50 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS03910 278090d9470827b391abdbb53c8768bd 380 PANTHER PTHR11808:SF49 1 380 5.7E-205 T 23-04-2016 CLI_RS03910 278090d9470827b391abdbb53c8768bd 380 PIRSF PIRSF001434 1 380 1.7E-143 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CLI_RS03910 278090d9470827b391abdbb53c8768bd 380 SUPERFAMILY SSF53383 8 377 4.76E-120 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS09290 7fd3b69f65ae94d353e2dde03abbcd09 97 Pfam PF05135 Phage gp6-like head-tail connector protein 3 70 3.5E-11 T 23-04-2016 IPR021146 Phage gp6-like head-tail connector protein CLI_RS09290 7fd3b69f65ae94d353e2dde03abbcd09 97 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 4 90 6.6E-12 T 23-04-2016 IPR006450 Phage protein of unkonwn function CLI_RS18845 d5740c537aba7596f41f1db17e152907 111 SUPERFAMILY SSF54211 2 110 1.67E-29 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS18845 d5740c537aba7596f41f1db17e152907 111 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 110 17.047 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CLI_RS18845 d5740c537aba7596f41f1db17e152907 111 PANTHER PTHR33992 2 107 2.6E-34 T 23-04-2016 CLI_RS18845 d5740c537aba7596f41f1db17e152907 111 Gene3D G3DSA:3.30.230.10 2 109 3.7E-35 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS18845 d5740c537aba7596f41f1db17e152907 111 Pfam PF00825 Ribonuclease P 2 107 9.0E-31 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CLI_RS18845 d5740c537aba7596f41f1db17e152907 111 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 6 106 1.0E-20 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CLI_RS18845 d5740c537aba7596f41f1db17e152907 111 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 110 4.8E-26 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 PRINTS PR01703 Manganese superoxide dismutase signature 119 127 4.6E-19 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.6E-19 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 PRINTS PR01703 Manganese superoxide dismutase signature 66 79 4.6E-19 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 PRINTS PR01703 Manganese superoxide dismutase signature 157 169 4.6E-19 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.6E-19 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 159 166 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 90 192 2.7E-36 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 PANTHER PTHR11404 1 198 7.3E-142 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 SUPERFAMILY SSF54719 82 196 1.44E-42 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 SUPERFAMILY SSF46609 1 86 2.49E-30 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 6.9E-27 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 PIRSF PIRSF000349 1 198 9.3E-79 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 PANTHER PTHR11404:SF23 1 198 7.3E-142 T 23-04-2016 CLI_RS11410 ae61fba8cf306dbeeac394eb2b48d729 198 Gene3D G3DSA:1.10.287.990 20 82 9.4E-23 T 23-04-2016 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 SMART SM00530 9 63 3.4E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 SUPERFAMILY SSF48452 259 416 1.73E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 Gene3D G3DSA:1.10.260.40 6 83 1.4E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 SUPERFAMILY SSF47413 5 63 6.57E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 Gene3D G3DSA:1.25.40.10 259 416 5.2E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 Gene3D G3DSA:1.25.40.10 149 220 5.2E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 SMART SM00028 148 181 130.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 SMART SM00028 344 377 250.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 SMART SM00028 265 298 35.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 SMART SM00028 188 221 300.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 SMART SM00028 384 417 0.018 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 SUPERFAMILY SSF48452 258 297 2.04E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 SUPERFAMILY SSF48452 143 225 2.04E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS02240 ba31c8646897ea4489c41e554f2bde67 417 Pfam PF12844 Helix-turn-helix domain 7 68 2.4E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS08320 bd547ebb5885d2a2c1eb26a62a6508a2 295 SUPERFAMILY SSF51730 1 283 3.53E-89 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like CLI_RS08320 bd547ebb5885d2a2c1eb26a62a6508a2 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 14 281 7.5E-98 T 23-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CLI_RS08320 bd547ebb5885d2a2c1eb26a62a6508a2 295 Pfam PF02219 Methylenetetrahydrofolate reductase 3 281 2.3E-81 T 23-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CLI_RS08320 bd547ebb5885d2a2c1eb26a62a6508a2 295 PANTHER PTHR21091 141 293 1.1E-29 T 23-04-2016 CLI_RS08320 bd547ebb5885d2a2c1eb26a62a6508a2 295 PANTHER PTHR21091:SF31 141 293 1.1E-29 T 23-04-2016 CLI_RS08320 bd547ebb5885d2a2c1eb26a62a6508a2 295 Gene3D G3DSA:3.20.20.220 1 284 7.1E-99 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like CLI_RS12925 1688aad9c30eddf2a70d82a34ca4d43b 91 Pfam PF00550 Phosphopantetheine attachment site 13 77 7.5E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS12925 1688aad9c30eddf2a70d82a34ca4d43b 91 SUPERFAMILY SSF47336 11 81 5.23E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS12925 1688aad9c30eddf2a70d82a34ca4d43b 91 Gene3D G3DSA:1.10.1200.10 10 82 1.1E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS18410 820bbbd28d727ad8da8eebaeaf26ed43 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 1.1E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS18410 820bbbd28d727ad8da8eebaeaf26ed43 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 1.1E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS18410 820bbbd28d727ad8da8eebaeaf26ed43 128 PANTHER PTHR11019:SF128 1 111 1.6E-57 T 23-04-2016 CLI_RS18410 820bbbd28d727ad8da8eebaeaf26ed43 128 SUPERFAMILY SSF46689 56 114 1.7E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS18410 820bbbd28d727ad8da8eebaeaf26ed43 128 Gene3D G3DSA:1.10.10.60 57 117 2.0E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS18410 820bbbd28d727ad8da8eebaeaf26ed43 128 Pfam PF12833 Helix-turn-helix domain 28 105 2.4E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS18410 820bbbd28d727ad8da8eebaeaf26ed43 128 SUPERFAMILY SSF46689 5 53 3.85E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS18410 820bbbd28d727ad8da8eebaeaf26ed43 128 PANTHER PTHR11019 1 111 1.6E-57 T 23-04-2016 CLI_RS18410 820bbbd28d727ad8da8eebaeaf26ed43 128 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 57 99 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLI_RS18410 820bbbd28d727ad8da8eebaeaf26ed43 128 Gene3D G3DSA:1.10.10.60 4 56 2.9E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS18410 820bbbd28d727ad8da8eebaeaf26ed43 128 SMART SM00342 20 103 2.8E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS08570 3f065bd08fbcf5e96b827e3cf17cdfc0 211 Pfam PF08241 Methyltransferase domain 51 150 1.6E-20 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLI_RS08570 3f065bd08fbcf5e96b827e3cf17cdfc0 211 PANTHER PTHR10108 39 201 1.3E-26 T 23-04-2016 CLI_RS08570 3f065bd08fbcf5e96b827e3cf17cdfc0 211 SUPERFAMILY SSF53335 26 201 1.27E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS08570 3f065bd08fbcf5e96b827e3cf17cdfc0 211 Gene3D G3DSA:3.40.50.150 24 204 2.3E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS11330 0d33304c601993d38262bcbb1f75682e 198 Pfam PF12978 Domain of Unknown Function with PDB structure (DUF3862) 63 197 1.4E-10 T 23-04-2016 IPR024418 Protein of unknown function DUF3862 CLI_RS09985 b37a9831dbe79f42b850b43171c52fc9 188 Pfam PF09819 ABC-type cobalt transport system, permease component 8 126 2.9E-30 T 23-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted CLI_RS02625 cf952ebf3e967774129c3ae01bc81552 121 SUPERFAMILY SSF46785 25 117 9.4E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02625 cf952ebf3e967774129c3ae01bc81552 121 Gene3D G3DSA:1.10.10.10 7 120 1.5E-39 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02625 cf952ebf3e967774129c3ae01bc81552 121 Pfam PF01022 Bacterial regulatory protein, arsR family 46 90 1.2E-19 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS02625 cf952ebf3e967774129c3ae01bc81552 121 PANTHER PTHR33154 1 121 2.7E-35 T 23-04-2016 CLI_RS02625 cf952ebf3e967774129c3ae01bc81552 121 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 61 79 - T 23-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 CLI_RS02625 cf952ebf3e967774129c3ae01bc81552 121 SMART SM00418 38 116 8.3E-35 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS02625 cf952ebf3e967774129c3ae01bc81552 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 87 102 2.3E-21 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS02625 cf952ebf3e967774129c3ae01bc81552 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 70 2.3E-21 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS02625 cf952ebf3e967774129c3ae01bc81552 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.3E-21 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS02625 cf952ebf3e967774129c3ae01bc81552 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 2.3E-21 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS14080 2d83839e4877456a9dbb3e46967a9287 665 Pfam PF08329 Chitinase A, N-terminal domain 59 154 7.9E-6 T 23-04-2016 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 CLI_RS14080 2d83839e4877456a9dbb3e46967a9287 665 Gene3D G3DSA:2.60.40.10 77 154 2.7E-21 T 23-04-2016 IPR013783 Immunoglobulin-like fold CLI_RS14080 2d83839e4877456a9dbb3e46967a9287 665 PANTHER PTHR11177:SF215 285 665 6.2E-276 T 23-04-2016 CLI_RS14080 2d83839e4877456a9dbb3e46967a9287 665 PANTHER PTHR11177 285 665 6.2E-276 T 23-04-2016 CLI_RS14080 2d83839e4877456a9dbb3e46967a9287 665 PANTHER PTHR11177:SF215 163 189 6.2E-276 T 23-04-2016 CLI_RS14080 2d83839e4877456a9dbb3e46967a9287 665 PANTHER PTHR11177 163 189 6.2E-276 T 23-04-2016 CLI_RS14080 2d83839e4877456a9dbb3e46967a9287 665 SUPERFAMILY SSF81296 58 154 3.64E-21 T 23-04-2016 IPR014756 Immunoglobulin E-set CLI_RS10335 ca109873eb37557f2de8c17d79e71e28 336 PANTHER PTHR22916 36 216 8.5E-41 T 23-04-2016 CLI_RS10335 ca109873eb37557f2de8c17d79e71e28 336 SUPERFAMILY SSF53448 36 219 3.05E-26 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10335 ca109873eb37557f2de8c17d79e71e28 336 Pfam PF00535 Glycosyl transferase family 2 36 198 2.9E-16 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CLI_RS10335 ca109873eb37557f2de8c17d79e71e28 336 Gene3D G3DSA:3.90.550.10 37 220 7.7E-21 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10335 ca109873eb37557f2de8c17d79e71e28 336 PANTHER PTHR22916:SF26 36 216 8.5E-41 T 23-04-2016 CLI_RS06390 970a3677fd548d4e97e0fe8c377c45d7 163 Pfam PF04525 LURP-one-related 3 149 2.3E-15 T 23-04-2016 IPR007612 LURP1-related protein domain CLI_RS06390 970a3677fd548d4e97e0fe8c377c45d7 163 SUPERFAMILY SSF54518 2 153 6.02E-32 T 23-04-2016 IPR025659 Tubby C-terminal-like domain CLI_RS06390 970a3677fd548d4e97e0fe8c377c45d7 163 PANTHER PTHR31087:SF9 3 158 1.6E-73 T 23-04-2016 CLI_RS06390 970a3677fd548d4e97e0fe8c377c45d7 163 PANTHER PTHR31087 3 158 1.6E-73 T 23-04-2016 CLI_RS03365 45ee990f13bb58705d4b64a2794c1f9c 281 SMART SM00382 29 207 1.4E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03365 45ee990f13bb58705d4b64a2794c1f9c 281 Pfam PF00005 ABC transporter 20 160 4.6E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03365 45ee990f13bb58705d4b64a2794c1f9c 281 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS03365 45ee990f13bb58705d4b64a2794c1f9c 281 SUPERFAMILY SSF52540 3 219 1.41E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03365 45ee990f13bb58705d4b64a2794c1f9c 281 Gene3D G3DSA:3.40.50.300 2 223 2.8E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03365 45ee990f13bb58705d4b64a2794c1f9c 281 PANTHER PTHR24220 6 274 1.8E-151 T 23-04-2016 CLI_RS03365 45ee990f13bb58705d4b64a2794c1f9c 281 PANTHER PTHR24220:SF428 6 274 1.8E-151 T 23-04-2016 CLI_RS03200 4ccf1eadf37e49c90a07880b6ac643b4 636 PIRSF PIRSF005091 1 625 1.5E-183 T 23-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 CLI_RS03200 4ccf1eadf37e49c90a07880b6ac643b4 636 PANTHER PTHR10342 226 567 1.8E-70 T 23-04-2016 CLI_RS03200 4ccf1eadf37e49c90a07880b6ac643b4 636 SUPERFAMILY SSF53649 252 613 6.98E-63 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLI_RS03200 4ccf1eadf37e49c90a07880b6ac643b4 636 PANTHER PTHR10342:SF225 226 567 1.8E-70 T 23-04-2016 CLI_RS03200 4ccf1eadf37e49c90a07880b6ac643b4 636 Pfam PF00884 Sulfatase 254 539 6.2E-41 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CLI_RS03200 4ccf1eadf37e49c90a07880b6ac643b4 636 Gene3D G3DSA:3.40.720.10 254 555 1.1E-41 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLI_RS11810 4c29db95164a5059a536f0a02a2ba589 340 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 197 304 5.8E-28 T 23-04-2016 IPR006528 Phage head morphogenesis domain CLI_RS11810 4c29db95164a5059a536f0a02a2ba589 340 Pfam PF04233 Phage Mu protein F like protein 196 301 7.2E-18 T 23-04-2016 IPR006528 Phage head morphogenesis domain CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 Pfam PF01742 Clostridial neurotoxin zinc protease 1 364 6.0E-91 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 Gene3D G3DSA:2.60.120.200 806 1010 2.0E-43 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 Pfam PF08470 Nontoxic nonhaemagglutinin C-terminal 998 1161 1.0E-86 T 23-04-2016 IPR013677 Nontoxic nonhaemagglutinin C-terminal CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 Pfam PF07953 Clostridium neurotoxin, N-terminal receptor binding 814 988 3.0E-55 T 23-04-2016 IPR012928 Clostridium neurotoxin, receptor binding N-terminal GO:0004222|GO:0005576|GO:0009405|GO:0050827|GO:0051609 CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 SUPERFAMILY SSF49899 806 988 9.87E-38 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 SUPERFAMILY SSF58091 465 796 1.15E-117 T 23-04-2016 CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 SUPERFAMILY SSF55486 1 476 1.5E-160 T 23-04-2016 CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 Gene3D G3DSA:3.90.1240.10 1 378 1.8E-126 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 Gene3D G3DSA:1.20.1120.10 422 770 6.9E-122 T 23-04-2016 CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 PRINTS PR00760 Bontoxilysin signature 228 244 9.9E-49 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 PRINTS PR00760 Bontoxilysin signature 6 22 9.9E-49 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 PRINTS PR00760 Bontoxilysin signature 181 193 9.9E-49 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 PRINTS PR00760 Bontoxilysin signature 30 46 9.9E-49 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 PRINTS PR00760 Bontoxilysin signature 88 110 9.9E-49 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS04080 fd5a31a490704340ff81601dd57bfa43 1163 PRINTS PR00760 Bontoxilysin signature 63 79 9.9E-49 T 23-04-2016 IPR000395 Botulinum neurotoxin/Tetanus toxin GO:0004222|GO:0006508|GO:0009405 CLI_RS03760 04de93d6b6403b9e0cb0d5d5022ae946 162 PANTHER PTHR35790:SF1 5 154 3.0E-41 T 23-04-2016 CLI_RS03760 04de93d6b6403b9e0cb0d5d5022ae946 162 PANTHER PTHR35790 5 154 3.0E-41 T 23-04-2016 CLI_RS03760 04de93d6b6403b9e0cb0d5d5022ae946 162 SUPERFAMILY SSF46785 9 148 7.68E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03760 04de93d6b6403b9e0cb0d5d5022ae946 162 Gene3D G3DSA:1.10.10.10 2 149 6.1E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03760 04de93d6b6403b9e0cb0d5d5022ae946 162 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 99 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site CLI_RS03760 04de93d6b6403b9e0cb0d5d5022ae946 162 SMART SM00347 26 129 5.2E-15 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS03760 04de93d6b6403b9e0cb0d5d5022ae946 162 Pfam PF01047 MarR family 34 91 1.0E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS06130 c8df52782f50a22c59387440940455af 262 SMART SM00062 27 255 5.5E-64 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLI_RS06130 c8df52782f50a22c59387440940455af 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 6.4E-60 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLI_RS06130 c8df52782f50a22c59387440940455af 262 Gene3D G3DSA:3.40.190.10 106 212 3.1E-29 T 23-04-2016 CLI_RS06130 c8df52782f50a22c59387440940455af 262 Gene3D G3DSA:3.40.190.10 24 105 1.6E-38 T 23-04-2016 CLI_RS06130 c8df52782f50a22c59387440940455af 262 Gene3D G3DSA:3.40.190.10 214 257 1.6E-38 T 23-04-2016 CLI_RS06130 c8df52782f50a22c59387440940455af 262 PANTHER PTHR18966:SF205 17 256 3.5E-140 T 23-04-2016 CLI_RS06130 c8df52782f50a22c59387440940455af 262 PANTHER PTHR18966 17 256 3.5E-140 T 23-04-2016 CLI_RS06130 c8df52782f50a22c59387440940455af 262 SUPERFAMILY SSF53850 3 255 2.07E-63 T 23-04-2016 CLI_RS07690 163c0d5b84e2e0f3d1dcdfcff83f952a 290 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 13 235 2.6E-37 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CLI_RS07690 163c0d5b84e2e0f3d1dcdfcff83f952a 290 Gene3D G3DSA:3.20.20.210 13 244 1.1E-31 T 23-04-2016 CLI_RS07690 163c0d5b84e2e0f3d1dcdfcff83f952a 290 SUPERFAMILY SSF51726 16 228 1.67E-28 T 23-04-2016 CLI_RS01140 8a92a84a3a16e95ac34a5201ebeff8a8 222 Gene3D G3DSA:3.30.240.20 77 151 5.9E-28 T 23-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLI_RS01140 8a92a84a3a16e95ac34a5201ebeff8a8 222 Gene3D G3DSA:3.30.240.20 166 222 5.6E-18 T 23-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLI_RS01140 8a92a84a3a16e95ac34a5201ebeff8a8 222 PANTHER PTHR34582 1 222 8.4E-119 T 23-04-2016 CLI_RS01140 8a92a84a3a16e95ac34a5201ebeff8a8 222 PANTHER PTHR34582:SF4 1 222 8.4E-119 T 23-04-2016 CLI_RS01140 8a92a84a3a16e95ac34a5201ebeff8a8 222 Pfam PF04239 Protein of unknown function (DUF421) 86 201 1.3E-36 T 23-04-2016 IPR007353 Protein of unknown function DUF421 CLI_RS03690 4c507dbef92b8bf1bef9616021bfc4dd 637 SUPERFAMILY SSF47794 577 633 1.14E-5 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 CLI_RS03690 4c507dbef92b8bf1bef9616021bfc4dd 637 Gene3D G3DSA:3.40.50.300 19 107 1.4E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03690 4c507dbef92b8bf1bef9616021bfc4dd 637 Gene3D G3DSA:3.40.50.300 236 262 1.4E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03690 4c507dbef92b8bf1bef9616021bfc4dd 637 Gene3D G3DSA:1.10.150.20 589 633 3.3E-4 T 23-04-2016 CLI_RS03690 4c507dbef92b8bf1bef9616021bfc4dd 637 SUPERFAMILY SSF52540 49 102 2.31E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03690 4c507dbef92b8bf1bef9616021bfc4dd 637 SUPERFAMILY SSF52540 212 392 2.31E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17115 223fda91ffdec319bc5750c4a98661dd 80 PANTHER PTHR34477 1 77 1.5E-34 T 23-04-2016 CLI_RS17115 223fda91ffdec319bc5750c4a98661dd 80 PANTHER PTHR34477:SF1 1 77 1.5E-34 T 23-04-2016 CLI_RS17115 223fda91ffdec319bc5750c4a98661dd 80 SUPERFAMILY SSF82771 1 71 3.27E-15 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CLI_RS17115 223fda91ffdec319bc5750c4a98661dd 80 Pfam PF01541 GIY-YIG catalytic domain 1 72 3.0E-19 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CLI_RS17815 448625c942122d9b72ca9099cb6ae643 111 SUPERFAMILY SSF54843 1 110 7.19E-44 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CLI_RS17815 448625c942122d9b72ca9099cb6ae643 111 PANTHER PTHR13501 1 109 6.4E-50 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CLI_RS17815 448625c942122d9b72ca9099cb6ae643 111 Gene3D G3DSA:3.90.470.10 1 110 1.2E-42 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CLI_RS17815 448625c942122d9b72ca9099cb6ae643 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 5.6E-42 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CLI_RS17815 448625c942122d9b72ca9099cb6ae643 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.513 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CLI_RS17815 448625c942122d9b72ca9099cb6ae643 111 Pfam PF00237 Ribosomal protein L22p/L17e 8 108 9.8E-33 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CLI_RS17815 448625c942122d9b72ca9099cb6ae643 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17360 25e00893b2249dfeec75c129bfa77829 401 PANTHER PTHR30474 41 401 2.4E-196 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CLI_RS17360 25e00893b2249dfeec75c129bfa77829 401 Pfam PF01098 Cell cycle protein 66 399 1.8E-81 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CLI_RS17360 25e00893b2249dfeec75c129bfa77829 401 PANTHER PTHR30474:SF3 41 401 2.4E-196 T 23-04-2016 CLI_RS07645 22c5c683b3a7811316f3606572e9c4bd 223 PANTHER PTHR30183 1 223 1.9E-78 T 23-04-2016 CLI_RS07645 22c5c683b3a7811316f3606572e9c4bd 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 22 209 3.7E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07645 22c5c683b3a7811316f3606572e9c4bd 223 Gene3D G3DSA:1.10.3720.10 2 220 5.5E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07645 22c5c683b3a7811316f3606572e9c4bd 223 SUPERFAMILY SSF161098 2 211 3.01E-50 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07645 22c5c683b3a7811316f3606572e9c4bd 223 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 7 214 1.3E-71 T 23-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 SUPERFAMILY SSF52009 123 244 3.14E-38 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 462 477 1.9E-32 T 23-04-2016 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 291 310 1.9E-32 T 23-04-2016 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 445 460 1.9E-32 T 23-04-2016 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 498 510 1.9E-32 T 23-04-2016 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 182 193 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 Gene3D G3DSA:1.10.274.10 21 130 2.1E-39 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 PIRSF PIRSF000732 1 538 2.3E-221 T 23-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 445 463 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 SUPERFAMILY SSF51621 247 537 6.28E-112 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 Gene3D G3DSA:3.50.30.10 131 252 1.5E-45 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 249 536 4.3E-125 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 SUPERFAMILY SSF47831 22 141 3.79E-35 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 Pfam PF05524 PEP-utilising enzyme, N-terminal 3 124 3.8E-34 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 Gene3D G3DSA:3.20.20.60 253 535 1.2E-114 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 3 537 3.8E-219 T 23-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 Pfam PF00391 PEP-utilising enzyme, mobile domain 150 223 5.9E-25 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 PANTHER PTHR22931 12 537 1.3E-217 T 23-04-2016 CLI_RS17625 7dc1fcc08f482deb1a2a6b0864e5b86e 538 PANTHER PTHR22931:SF28 12 537 1.3E-217 T 23-04-2016 CLI_RS05400 d10208d51963673447795dccc5ef8d40 73 SUPERFAMILY SSF50037 6 73 9.16E-21 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal CLI_RS05400 d10208d51963673447795dccc5ef8d40 73 Pfam PF04023 FeoA domain 2 73 8.0E-16 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLI_RS05400 d10208d51963673447795dccc5ef8d40 73 SMART SM00899 2 73 3.6E-19 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLI_RS05400 d10208d51963673447795dccc5ef8d40 73 PANTHER PTHR33238 1 72 2.9E-18 T 23-04-2016 CLI_RS01845 9990682ae3f19f7cdd9db6bc2dbbe54d 502 Gene3D G3DSA:3.10.630.10 251 281 1.8E-121 T 23-04-2016 CLI_RS01845 9990682ae3f19f7cdd9db6bc2dbbe54d 502 Gene3D G3DSA:3.10.630.10 1 205 1.8E-121 T 23-04-2016 CLI_RS01845 9990682ae3f19f7cdd9db6bc2dbbe54d 502 PIRSF PIRSF033132 1 502 2.0E-269 T 23-04-2016 IPR014999 Uncharacterised protein family UPF0371 CLI_RS01845 9990682ae3f19f7cdd9db6bc2dbbe54d 502 Gene3D G3DSA:1.20.1570.10 206 244 1.3E-46 T 23-04-2016 CLI_RS01845 9990682ae3f19f7cdd9db6bc2dbbe54d 502 Gene3D G3DSA:1.20.1570.10 282 339 1.3E-46 T 23-04-2016 CLI_RS01845 9990682ae3f19f7cdd9db6bc2dbbe54d 502 Pfam PF08903 Domain of unknown function (DUF1846) 3 499 2.5E-239 T 23-04-2016 IPR014999 Uncharacterised protein family UPF0371 CLI_RS01845 9990682ae3f19f7cdd9db6bc2dbbe54d 502 Hamap MF_01567 UPF0371 protein . 1 502 59.843 T 23-04-2016 IPR014999 Uncharacterised protein family UPF0371 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 PANTHER PTHR32089:SF1 178 360 5.8E-86 T 23-04-2016 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 PANTHER PTHR32089:SF1 378 570 5.8E-86 T 23-04-2016 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 PANTHER PTHR32089 178 360 5.8E-86 T 23-04-2016 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 PANTHER PTHR32089 378 570 5.8E-86 T 23-04-2016 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 185 2.6E-47 T 23-04-2016 IPR024478 4HB MCP domain CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 SMART SM00304 212 264 4.3E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 SMART SM00304 503 556 55.0 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 9.0E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 9.0E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 9.0E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 Pfam PF00672 HAMP domain 193 259 1.5E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 568 9.9E-35 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 Gene3D G3DSA:1.10.287.950 249 319 1.6E-5 T 23-04-2016 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 Gene3D G3DSA:1.10.287.950 320 525 3.6E-45 T 23-04-2016 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 SMART SM00283 272 569 8.6E-37 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 SUPERFAMILY SSF58104 232 266 2.35E-60 T 23-04-2016 CLI_RS14065 10286b8985da8894891c576e0c6734c3 570 SUPERFAMILY SSF58104 299 569 2.35E-60 T 23-04-2016 CLI_RS18260 f90458be389469844d55de21c6f11324 319 SUPERFAMILY SSF53271 73 309 1.78E-67 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS18260 f90458be389469844d55de21c6f11324 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 209 317 4.3E-22 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CLI_RS18260 f90458be389469844d55de21c6f11324 319 PANTHER PTHR10210 1 318 5.1E-185 T 23-04-2016 CLI_RS18260 f90458be389469844d55de21c6f11324 319 Gene3D G3DSA:3.40.50.2020 6 164 8.4E-77 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS18260 f90458be389469844d55de21c6f11324 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 8 318 4.4E-127 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CLI_RS18260 f90458be389469844d55de21c6f11324 319 Gene3D G3DSA:3.40.50.2020 165 289 5.8E-54 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS18260 f90458be389469844d55de21c6f11324 319 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 8 318 51.094 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CLI_RS18260 f90458be389469844d55de21c6f11324 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 CLI_RS18260 f90458be389469844d55de21c6f11324 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 124 2.6E-51 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CLI_RS18260 f90458be389469844d55de21c6f11324 319 SMART SM01400 8 124 1.3E-80 T 23-04-2016 CLI_RS18260 f90458be389469844d55de21c6f11324 319 PANTHER PTHR10210:SF41 1 318 5.1E-185 T 23-04-2016 CLI_RS01425 c24c004786952dd3d326b66a28664e2b 323 PANTHER PTHR10992:SF758 203 320 2.1E-15 T 23-04-2016 CLI_RS01425 c24c004786952dd3d326b66a28664e2b 323 PANTHER PTHR10992:SF758 45 177 2.1E-15 T 23-04-2016 CLI_RS01425 c24c004786952dd3d326b66a28664e2b 323 SUPERFAMILY SSF53474 40 165 1.37E-22 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS01425 c24c004786952dd3d326b66a28664e2b 323 Pfam PF00561 alpha/beta hydrolase fold 63 176 2.9E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS01425 c24c004786952dd3d326b66a28664e2b 323 PANTHER PTHR10992 203 320 2.1E-15 T 23-04-2016 CLI_RS01425 c24c004786952dd3d326b66a28664e2b 323 PANTHER PTHR10992 45 177 2.1E-15 T 23-04-2016 CLI_RS01425 c24c004786952dd3d326b66a28664e2b 323 Gene3D G3DSA:3.40.50.1820 44 320 1.8E-25 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS03720 a88bc6fe1e15948e373dd7548b85d2ee 161 SUPERFAMILY SSF55136 12 161 1.67E-18 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS03720 a88bc6fe1e15948e373dd7548b85d2ee 161 Gene3D G3DSA:3.20.80.10 5 161 9.1E-31 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS03720 a88bc6fe1e15948e373dd7548b85d2ee 161 Pfam PF06445 GyrI-like small molecule binding domain 12 160 2.3E-13 T 23-04-2016 IPR029442 GyrI-like small molecule binding domain CLI_RS03720 a88bc6fe1e15948e373dd7548b85d2ee 161 SMART SM00871 4 161 1.2E-16 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding CLI_RS05525 2b0676fb638509e5ebd9d09b128620a6 600 PANTHER PTHR24222 1 599 0.0 T 23-04-2016 CLI_RS05525 2b0676fb638509e5ebd9d09b128620a6 600 SUPERFAMILY SSF90123 3 335 1.44E-46 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS05525 2b0676fb638509e5ebd9d09b128620a6 600 PANTHER PTHR24222:SF23 1 599 0.0 T 23-04-2016 CLI_RS05525 2b0676fb638509e5ebd9d09b128620a6 600 Gene3D G3DSA:1.20.1560.10 10 331 5.4E-44 T 23-04-2016 CLI_RS05525 2b0676fb638509e5ebd9d09b128620a6 600 SUPERFAMILY SSF52540 340 587 9.21E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05525 2b0676fb638509e5ebd9d09b128620a6 600 Pfam PF00664 ABC transporter transmembrane region 28 292 8.7E-18 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS05525 2b0676fb638509e5ebd9d09b128620a6 600 Pfam PF00005 ABC transporter 368 517 3.0E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS05525 2b0676fb638509e5ebd9d09b128620a6 600 SMART SM00382 377 570 6.9E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS05525 2b0676fb638509e5ebd9d09b128620a6 600 Gene3D G3DSA:3.40.50.300 347 582 1.5E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06135 4bfd3ab79f6fb6d983c308f91320d2fe 376 PANTHER PTHR11601:SF38 5 375 1.1E-174 T 23-04-2016 CLI_RS06135 4bfd3ab79f6fb6d983c308f91320d2fe 376 Pfam PF00266 Aminotransferase class-V 5 365 4.5E-88 T 23-04-2016 IPR000192 Aminotransferase class V domain CLI_RS06135 4bfd3ab79f6fb6d983c308f91320d2fe 376 PIRSF PIRSF005572 2 376 1.5E-128 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CLI_RS06135 4bfd3ab79f6fb6d983c308f91320d2fe 376 Gene3D G3DSA:3.90.1150.10 250 374 7.5E-43 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS06135 4bfd3ab79f6fb6d983c308f91320d2fe 376 SUPERFAMILY SSF53383 3 376 5.0E-109 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS06135 4bfd3ab79f6fb6d983c308f91320d2fe 376 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLI_RS06135 4bfd3ab79f6fb6d983c308f91320d2fe 376 PANTHER PTHR11601 5 375 1.1E-174 T 23-04-2016 CLI_RS06135 4bfd3ab79f6fb6d983c308f91320d2fe 376 Gene3D G3DSA:3.40.640.10 17 249 9.1E-89 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS03870 19a29faadf424d2ed736b24ea2d06ea3 91 SUPERFAMILY SSF46689 1 89 2.6E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS03870 19a29faadf424d2ed736b24ea2d06ea3 91 Pfam PF08765 Mor transcription activator family 14 88 5.6E-6 T 23-04-2016 IPR014875 Mor transcription activator CLI_RS03870 19a29faadf424d2ed736b24ea2d06ea3 91 PANTHER PTHR37812:SF1 1 90 2.1E-24 T 23-04-2016 CLI_RS03870 19a29faadf424d2ed736b24ea2d06ea3 91 PANTHER PTHR37812 1 90 2.1E-24 T 23-04-2016 CLI_RS03870 19a29faadf424d2ed736b24ea2d06ea3 91 Gene3D G3DSA:1.10.10.60 50 88 4.3E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS09245 b7b1c256e460667810d3717c09fae07e 385 Pfam PF14594 Siphovirus ReqiPepy6 Gp37-like protein 10 370 1.9E-99 T 23-04-2016 IPR029432 Siphovirus Gp37-like protein CLI_RS16385 d933b33b80d8809317821c34377eab9f 142 SUPERFAMILY SSF46785 4 132 1.4E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS16385 d933b33b80d8809317821c34377eab9f 142 Pfam PF01475 Ferric uptake regulator family 10 128 7.3E-32 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CLI_RS16385 d933b33b80d8809317821c34377eab9f 142 PANTHER PTHR33202 1 142 1.8E-52 T 23-04-2016 CLI_RS16385 d933b33b80d8809317821c34377eab9f 142 Gene3D G3DSA:1.10.10.10 2 82 2.1E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS16385 d933b33b80d8809317821c34377eab9f 142 PANTHER PTHR33202:SF7 1 142 1.8E-52 T 23-04-2016 CLI_RS13770 cd59e3fc8df070f810d33bec18cbc7e5 187 PIRSF PIRSF016897 1 187 5.2E-72 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CLI_RS13770 cd59e3fc8df070f810d33bec18cbc7e5 187 PANTHER PTHR35787 2 187 1.2E-71 T 23-04-2016 CLI_RS13770 cd59e3fc8df070f810d33bec18cbc7e5 187 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 12 185 2.1E-66 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CLI_RS13770 cd59e3fc8df070f810d33bec18cbc7e5 187 SUPERFAMILY SSF110391 11 186 4.32E-60 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CLI_RS13770 cd59e3fc8df070f810d33bec18cbc7e5 187 Gene3D G3DSA:3.20.20.400 2 186 3.2E-71 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CLI_RS14500 ae2331ca7962e0606d203865d0e71784 437 PANTHER PTHR30557 1 437 3.0E-259 T 23-04-2016 CLI_RS14500 ae2331ca7962e0606d203865d0e71784 437 Pfam PF01964 Radical SAM ThiC family 5 422 9.6E-194 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CLI_RS14500 ae2331ca7962e0606d203865d0e71784 437 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 4 428 53.412 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CLI_RS14500 ae2331ca7962e0606d203865d0e71784 437 PANTHER PTHR30557:SF1 1 437 3.0E-259 T 23-04-2016 CLI_RS14500 ae2331ca7962e0606d203865d0e71784 437 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 5 423 1.5E-179 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CLI_RS15325 e01b2b526c3ba55ca2937ab6e0d9159d 472 SMART SM00345 19 78 9.3E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS15325 e01b2b526c3ba55ca2937ab6e0d9159d 472 PANTHER PTHR11751 81 470 3.1E-204 T 23-04-2016 CLI_RS15325 e01b2b526c3ba55ca2937ab6e0d9159d 472 Pfam PF00155 Aminotransferase class I and II 124 458 3.7E-24 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS15325 e01b2b526c3ba55ca2937ab6e0d9159d 472 PANTHER PTHR11751:SF357 81 470 3.1E-204 T 23-04-2016 CLI_RS15325 e01b2b526c3ba55ca2937ab6e0d9159d 472 Gene3D G3DSA:3.40.640.10 132 355 2.1E-72 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS15325 e01b2b526c3ba55ca2937ab6e0d9159d 472 Gene3D G3DSA:1.10.10.10 10 77 7.4E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS15325 e01b2b526c3ba55ca2937ab6e0d9159d 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 9.3E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS15325 e01b2b526c3ba55ca2937ab6e0d9159d 472 SUPERFAMILY SSF53383 95 469 1.45E-83 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS15325 e01b2b526c3ba55ca2937ab6e0d9159d 472 SUPERFAMILY SSF46785 11 82 1.09E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS16520 d4eb725b75251e15a6915fcecc3d459a 110 Pfam PF02635 DsrE/DsrF-like family 1 85 4.5E-7 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein CLI_RS16520 d4eb725b75251e15a6915fcecc3d459a 110 Gene3D G3DSA:3.40.1260.10 4 90 2.1E-4 T 23-04-2016 IPR027396 DsrEFH-like CLI_RS16520 d4eb725b75251e15a6915fcecc3d459a 110 SUPERFAMILY SSF75169 1 109 5.38E-17 T 23-04-2016 IPR027396 DsrEFH-like CLI_RS07190 5c038ca7e1e82640432d9145dd9aa558 312 Pfam PF13732 Domain of unknown function (DUF4162) 217 305 2.9E-6 T 23-04-2016 IPR025302 Domain of unknown function DUF4162 CLI_RS07190 5c038ca7e1e82640432d9145dd9aa558 312 Pfam PF00005 ABC transporter 19 162 3.2E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS07190 5c038ca7e1e82640432d9145dd9aa558 312 PANTHER PTHR24220 5 305 1.1E-159 T 23-04-2016 CLI_RS07190 5c038ca7e1e82640432d9145dd9aa558 312 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07190 5c038ca7e1e82640432d9145dd9aa558 312 SMART SM00382 28 212 1.9E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS07190 5c038ca7e1e82640432d9145dd9aa558 312 Gene3D G3DSA:3.40.50.300 3 229 1.7E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07190 5c038ca7e1e82640432d9145dd9aa558 312 SUPERFAMILY SSF52540 3 222 2.46E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07190 5c038ca7e1e82640432d9145dd9aa558 312 PANTHER PTHR24220:SF501 5 305 1.1E-159 T 23-04-2016 CLI_RS07895 a7dba85c0dd769982556a0ccfef4af39 289 PANTHER PTHR11562 2 288 3.8E-87 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLI_RS07895 a7dba85c0dd769982556a0ccfef4af39 289 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 288 1.0E-19 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CLI_RS07895 a7dba85c0dd769982556a0ccfef4af39 289 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 288 5.9E-67 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLI_RS07895 a7dba85c0dd769982556a0ccfef4af39 289 SUPERFAMILY SSF161111 9 209 3.4E-51 T 23-04-2016 CLI_RS07895 a7dba85c0dd769982556a0ccfef4af39 289 Gene3D G3DSA:3.30.70.1350 209 288 8.5E-21 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CLI_RS07895 a7dba85c0dd769982556a0ccfef4af39 289 Pfam PF01545 Cation efflux family 16 207 1.2E-44 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLI_RS07895 a7dba85c0dd769982556a0ccfef4af39 289 Gene3D G3DSA:1.20.1510.10 15 207 8.1E-44 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CLI_RS07895 a7dba85c0dd769982556a0ccfef4af39 289 SUPERFAMILY SSF160240 211 287 1.96E-18 T 23-04-2016 CLI_RS07895 a7dba85c0dd769982556a0ccfef4af39 289 PANTHER PTHR11562:SF18 2 288 3.8E-87 T 23-04-2016 CLI_RS12250 e57fa572e6e3223297b1f09e1925f476 234 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 226 30.247 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 CLI_RS12250 e57fa572e6e3223297b1f09e1925f476 234 SMART SM00535 23 156 2.5E-57 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CLI_RS12250 e57fa572e6e3223297b1f09e1925f476 234 SMART SM00358 163 230 5.0E-21 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CLI_RS12250 e57fa572e6e3223297b1f09e1925f476 234 Pfam PF00035 Double-stranded RNA binding motif 163 229 1.3E-17 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CLI_RS12250 e57fa572e6e3223297b1f09e1925f476 234 Gene3D G3DSA:1.10.1520.10 8 153 1.2E-47 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CLI_RS12250 e57fa572e6e3223297b1f09e1925f476 234 SUPERFAMILY SSF54768 117 230 6.14E-24 T 23-04-2016 CLI_RS12250 e57fa572e6e3223297b1f09e1925f476 234 Pfam PF14622 Ribonuclease-III-like 21 147 2.8E-43 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CLI_RS12250 e57fa572e6e3223297b1f09e1925f476 234 SUPERFAMILY SSF69065 5 165 2.96E-49 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CLI_RS12250 e57fa572e6e3223297b1f09e1925f476 234 ProSitePatterns PS00517 Ribonuclease III family signature. 45 53 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CLI_RS12250 e57fa572e6e3223297b1f09e1925f476 234 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 12 229 1.5E-78 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 CLI_RS12250 e57fa572e6e3223297b1f09e1925f476 234 PANTHER PTHR11207 4 229 6.0E-88 T 23-04-2016 CLI_RS12250 e57fa572e6e3223297b1f09e1925f476 234 Gene3D G3DSA:3.30.160.20 162 229 3.5E-26 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CLI_RS09070 6f7431e0491e6a93ccebc16270822ea9 159 PANTHER PTHR10371 11 157 1.9E-65 T 23-04-2016 CLI_RS09070 6f7431e0491e6a93ccebc16270822ea9 159 PIRSF PIRSF000216 4 159 4.3E-55 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 CLI_RS09070 6f7431e0491e6a93ccebc16270822ea9 159 SUPERFAMILY SSF52833 11 157 1.34E-50 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS09070 6f7431e0491e6a93ccebc16270822ea9 159 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 15 157 4.3E-52 T 23-04-2016 CLI_RS09070 6f7431e0491e6a93ccebc16270822ea9 159 Gene3D G3DSA:3.40.30.10 78 156 7.4E-13 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS10350 0fce54d9c36f2d3b114a6a553c9f7a45 379 Gene3D G3DSA:3.40.640.10 24 244 3.2E-66 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS10350 0fce54d9c36f2d3b114a6a553c9f7a45 379 Gene3D G3DSA:3.90.1150.10 249 375 5.4E-30 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS10350 0fce54d9c36f2d3b114a6a553c9f7a45 379 PIRSF PIRSF000390 6 377 4.0E-101 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLI_RS10350 0fce54d9c36f2d3b114a6a553c9f7a45 379 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 22 371 1.1E-97 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLI_RS10350 0fce54d9c36f2d3b114a6a553c9f7a45 379 SUPERFAMILY SSF53383 10 375 1.17E-95 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS10350 0fce54d9c36f2d3b114a6a553c9f7a45 379 PANTHER PTHR30244:SF9 4 378 4.5E-186 T 23-04-2016 CLI_RS10350 0fce54d9c36f2d3b114a6a553c9f7a45 379 PANTHER PTHR30244 4 378 4.5E-186 T 23-04-2016 CLI_RS12875 eae9efae2a7fa7bc0ace16e0f3339ca4 288 Pfam PF02645 Uncharacterised protein, DegV family COG1307 5 285 1.6E-82 T 23-04-2016 IPR003797 DegV CLI_RS12875 eae9efae2a7fa7bc0ace16e0f3339ca4 288 PANTHER PTHR33434 1 286 1.3E-123 T 23-04-2016 CLI_RS12875 eae9efae2a7fa7bc0ace16e0f3339ca4 288 SUPERFAMILY SSF82549 4 285 1.1E-82 T 23-04-2016 CLI_RS12875 eae9efae2a7fa7bc0ace16e0f3339ca4 288 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 5 283 3.8E-93 T 23-04-2016 IPR003797 DegV CLI_RS12875 eae9efae2a7fa7bc0ace16e0f3339ca4 288 Gene3D G3DSA:3.40.50.10170 5 155 1.0E-43 T 23-04-2016 CLI_RS12875 eae9efae2a7fa7bc0ace16e0f3339ca4 288 PANTHER PTHR33434:SF3 1 286 1.3E-123 T 23-04-2016 CLI_RS12875 eae9efae2a7fa7bc0ace16e0f3339ca4 288 Gene3D G3DSA:3.30.1180.10 157 285 4.0E-43 T 23-04-2016 CLI_RS16525 0d9d259f48a5936ae2094bc327cb1cad 252 PANTHER PTHR24220 4 228 6.0E-96 T 23-04-2016 CLI_RS16525 0d9d259f48a5936ae2094bc327cb1cad 252 SUPERFAMILY SSF52540 3 233 4.78E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16525 0d9d259f48a5936ae2094bc327cb1cad 252 SMART SM00382 31 211 1.9E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS16525 0d9d259f48a5936ae2094bc327cb1cad 252 Gene3D G3DSA:3.40.50.300 3 220 5.9E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16525 0d9d259f48a5936ae2094bc327cb1cad 252 Pfam PF00005 ABC transporter 22 161 9.8E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS16525 0d9d259f48a5936ae2094bc327cb1cad 252 PANTHER PTHR24220:SF10 4 228 6.0E-96 T 23-04-2016 CLI_RS17510 9a8a48e7e8f3cbb7ce6210955bbefbf0 334 PANTHER PTHR39427 1 333 1.5E-128 T 23-04-2016 CLI_RS17510 9a8a48e7e8f3cbb7ce6210955bbefbf0 334 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 240 332 7.8E-47 T 23-04-2016 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 CLI_RS17510 9a8a48e7e8f3cbb7ce6210955bbefbf0 334 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 5 332 4.4E-147 T 23-04-2016 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 CLI_RS17510 9a8a48e7e8f3cbb7ce6210955bbefbf0 334 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 6 185 3.5E-77 T 23-04-2016 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 CLI_RS18500 bec3c543ebc70e8922433b8636984f74 162 Pfam PF08761 dUTPase 2 162 4.8E-50 T 23-04-2016 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 CLI_RS18500 bec3c543ebc70e8922433b8636984f74 162 PIRSF PIRSF030140 1 162 2.2E-58 T 23-04-2016 IPR016947 Uncharacterised phage-associated protein UCP030140 CLI_RS18500 bec3c543ebc70e8922433b8636984f74 162 SUPERFAMILY SSF101386 2 162 1.79E-46 T 23-04-2016 CLI_RS18500 bec3c543ebc70e8922433b8636984f74 162 Gene3D G3DSA:1.10.287.1080 4 79 0.001 T 23-04-2016 CLI_RS10035 d42ca306e846e80fccf26e14eaa24fca 251 Pfam PF00515 Tetratricopeptide repeat 57 89 3.7E-10 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CLI_RS10035 d42ca306e846e80fccf26e14eaa24fca 251 SUPERFAMILY SSF48439 39 236 1.83E-34 T 23-04-2016 CLI_RS10035 d42ca306e846e80fccf26e14eaa24fca 251 SMART SM00028 56 89 1.9E-8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS10035 d42ca306e846e80fccf26e14eaa24fca 251 SMART SM00028 90 123 24.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS10035 d42ca306e846e80fccf26e14eaa24fca 251 SMART SM00028 124 157 170.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS10035 d42ca306e846e80fccf26e14eaa24fca 251 SMART SM00028 158 191 6.3E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS10035 d42ca306e846e80fccf26e14eaa24fca 251 SMART SM00028 192 225 0.0027 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS10035 d42ca306e846e80fccf26e14eaa24fca 251 Gene3D G3DSA:1.25.40.10 132 228 3.5E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS10035 d42ca306e846e80fccf26e14eaa24fca 251 PANTHER PTHR23083 32 229 4.3E-44 T 23-04-2016 CLI_RS10035 d42ca306e846e80fccf26e14eaa24fca 251 Pfam PF13414 TPR repeat 167 204 4.4E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS10035 d42ca306e846e80fccf26e14eaa24fca 251 Gene3D G3DSA:1.25.40.10 36 131 5.4E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 33 303 59.198 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 Pfam PF02881 SRP54-type protein, helical bundle domain 20 83 7.1E-13 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 Gene3D G3DSA:3.40.50.300 100 303 6.0E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 34 303 1.9E-109 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 Pfam PF00448 SRP54-type protein, GTPase domain 103 303 8.7E-79 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 Gene3D G3DSA:1.20.120.140 4 85 2.1E-28 T 23-04-2016 CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 SUPERFAMILY SSF52540 102 302 3.77E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 SMART SM00963 9 90 4.4E-20 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 PANTHER PTHR11564 4 303 8.6E-135 T 23-04-2016 CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 277 290 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 SMART SM00382 102 260 2.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 SMART SM00962 103 303 1.3E-108 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 SUPERFAMILY SSF47364 5 83 7.07E-22 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CLI_RS12230 e45bce24f7b40fff915a231cf18cbcda 303 PANTHER PTHR11564:SF16 4 303 8.6E-135 T 23-04-2016 CLI_RS00400 72d2cbb5f3908f3b2d61fe4b1420d58a 482 PANTHER PTHR11751:SF360 5 388 1.2E-186 T 23-04-2016 CLI_RS00400 72d2cbb5f3908f3b2d61fe4b1420d58a 482 Gene3D G3DSA:3.90.1150.10 283 407 1.4E-18 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS00400 72d2cbb5f3908f3b2d61fe4b1420d58a 482 Gene3D G3DSA:3.40.640.10 5 282 6.8E-89 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS00400 72d2cbb5f3908f3b2d61fe4b1420d58a 482 Gene3D G3DSA:3.90.100.10 408 482 2.0E-18 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLI_RS00400 72d2cbb5f3908f3b2d61fe4b1420d58a 482 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 5 368 2.9E-67 T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CLI_RS00400 72d2cbb5f3908f3b2d61fe4b1420d58a 482 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 412 458 4.7E-7 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLI_RS00400 72d2cbb5f3908f3b2d61fe4b1420d58a 482 SUPERFAMILY SSF53383 5 390 3.02E-75 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS00400 72d2cbb5f3908f3b2d61fe4b1420d58a 482 PANTHER PTHR11751 5 388 1.2E-186 T 23-04-2016 CLI_RS16710 0e3cb1781afd655569253f3263d00b87 520 Gene3D G3DSA:3.90.76.10 66 169 3.7E-21 T 23-04-2016 CLI_RS16710 0e3cb1781afd655569253f3263d00b87 520 SUPERFAMILY SSF53850 36 516 1.36E-68 T 23-04-2016 CLI_RS16710 0e3cb1781afd655569253f3263d00b87 520 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 446 5.5E-51 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain CLI_RS16710 0e3cb1781afd655569253f3263d00b87 520 Gene3D G3DSA:3.10.105.10 301 486 1.0E-22 T 23-04-2016 CLI_RS16710 0e3cb1781afd655569253f3263d00b87 520 PIRSF PIRSF002741 1 516 2.9E-56 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLI_RS16710 0e3cb1781afd655569253f3263d00b87 520 PANTHER PTHR30290 1 520 3.5E-114 T 23-04-2016 CLI_RS16710 0e3cb1781afd655569253f3263d00b87 520 Gene3D G3DSA:3.40.190.10 170 300 5.9E-20 T 23-04-2016 CLI_RS16710 0e3cb1781afd655569253f3263d00b87 520 PANTHER PTHR30290:SF10 1 520 3.5E-114 T 23-04-2016 CLI_RS06685 d3173f1a57b30c5eb530e5b2f5b2e065 201 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 193 25.901 T 23-04-2016 IPR022929 Putative manganese efflux pump MntP CLI_RS06685 d3173f1a57b30c5eb530e5b2f5b2e065 201 PANTHER PTHR35529 2 197 1.3E-75 T 23-04-2016 CLI_RS06685 d3173f1a57b30c5eb530e5b2f5b2e065 201 Pfam PF02659 Putative manganese efflux pump 31 190 1.8E-54 T 23-04-2016 IPR003810 Putative manganese efflux pump CLI_RS06685 d3173f1a57b30c5eb530e5b2f5b2e065 201 SUPERFAMILY SSF103473 4 199 7.59E-5 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS01655 957a132e9a09bf4d53d719222e31b2fd 253 PANTHER PTHR30514:SF1 1 253 1.6E-29 T 23-04-2016 CLI_RS01655 957a132e9a09bf4d53d719222e31b2fd 253 Gene3D G3DSA:1.10.10.10 8 60 5.5E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01655 957a132e9a09bf4d53d719222e31b2fd 253 Gene3D G3DSA:3.40.50.10490 61 252 3.2E-30 T 23-04-2016 CLI_RS01655 957a132e9a09bf4d53d719222e31b2fd 253 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 70 3.7E-10 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLI_RS01655 957a132e9a09bf4d53d719222e31b2fd 253 PANTHER PTHR30514 1 253 1.6E-29 T 23-04-2016 CLI_RS01655 957a132e9a09bf4d53d719222e31b2fd 253 SUPERFAMILY SSF46689 10 73 3.94E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS01655 957a132e9a09bf4d53d719222e31b2fd 253 SUPERFAMILY SSF53697 87 252 1.32E-26 T 23-04-2016 CLI_RS01655 957a132e9a09bf4d53d719222e31b2fd 253 Pfam PF01380 SIS domain 116 240 7.8E-13 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CLI_RS10490 3a5410eb342d3219f080e7cc3d47eae7 450 SUPERFAMILY SSF53448 11 231 6.93E-50 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10490 3a5410eb342d3219f080e7cc3d47eae7 450 Gene3D G3DSA:3.90.550.10 11 235 3.3E-47 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10490 3a5410eb342d3219f080e7cc3d47eae7 450 Gene3D G3DSA:3.90.550.10 252 449 3.0E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10490 3a5410eb342d3219f080e7cc3d47eae7 450 Pfam PF00535 Glycosyl transferase family 2 252 379 4.3E-14 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CLI_RS10490 3a5410eb342d3219f080e7cc3d47eae7 450 Pfam PF00535 Glycosyl transferase family 2 13 181 1.8E-35 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CLI_RS10490 3a5410eb342d3219f080e7cc3d47eae7 450 SUPERFAMILY SSF53448 251 449 4.69E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10490 3a5410eb342d3219f080e7cc3d47eae7 450 PANTHER PTHR22916:SF3 11 383 1.1E-66 T 23-04-2016 CLI_RS10490 3a5410eb342d3219f080e7cc3d47eae7 450 PANTHER PTHR22916 11 383 1.1E-66 T 23-04-2016 CLI_RS17980 f7c67ef078e0ab326c78150bd0986737 366 Pfam PF01938 TRAM domain 300 349 5.5E-6 T 23-04-2016 IPR002792 TRAM domain CLI_RS17980 f7c67ef078e0ab326c78150bd0986737 366 Gene3D G3DSA:3.40.50.1010 171 298 5.8E-34 T 23-04-2016 IPR029060 PIN domain-like CLI_RS17980 f7c67ef078e0ab326c78150bd0986737 366 SMART SM00670 169 276 3.5E-13 T 23-04-2016 IPR002716 PIN domain CLI_RS17980 f7c67ef078e0ab326c78150bd0986737 366 Pfam PF01850 PIN domain 172 279 7.5E-6 T 23-04-2016 IPR002716 PIN domain CLI_RS17980 f7c67ef078e0ab326c78150bd0986737 366 PANTHER PTHR11603 1 365 1.5E-113 T 23-04-2016 CLI_RS17980 f7c67ef078e0ab326c78150bd0986737 366 SUPERFAMILY SSF88723 171 297 1.74E-25 T 23-04-2016 IPR029060 PIN domain-like CLI_RS17980 f7c67ef078e0ab326c78150bd0986737 366 PANTHER PTHR11603:SF147 1 365 1.5E-113 T 23-04-2016 CLI_RS06895 354d7c2308ca24b5d55ad54580502c26 259 SMART SM00257 28 71 4.4E-10 T 23-04-2016 IPR018392 LysM domain CLI_RS06895 354d7c2308ca24b5d55ad54580502c26 259 SMART SM00257 74 117 1.4E-13 T 23-04-2016 IPR018392 LysM domain CLI_RS06895 354d7c2308ca24b5d55ad54580502c26 259 Pfam PF01476 LysM domain 29 71 1.9E-10 T 23-04-2016 IPR018392 LysM domain CLI_RS06895 354d7c2308ca24b5d55ad54580502c26 259 Pfam PF01476 LysM domain 75 117 3.8E-11 T 23-04-2016 IPR018392 LysM domain CLI_RS06895 354d7c2308ca24b5d55ad54580502c26 259 Gene3D G3DSA:3.10.350.10 74 118 4.3E-16 T 23-04-2016 IPR018392 LysM domain CLI_RS06895 354d7c2308ca24b5d55ad54580502c26 259 Gene3D G3DSA:3.10.350.10 29 71 2.2E-14 T 23-04-2016 IPR018392 LysM domain CLI_RS06895 354d7c2308ca24b5d55ad54580502c26 259 PANTHER PTHR21666 139 257 6.4E-17 T 23-04-2016 CLI_RS06895 354d7c2308ca24b5d55ad54580502c26 259 PANTHER PTHR21666:SF199 139 257 6.4E-17 T 23-04-2016 CLI_RS06895 354d7c2308ca24b5d55ad54580502c26 259 SUPERFAMILY SSF54106 29 71 4.05E-10 T 23-04-2016 IPR018392 LysM domain CLI_RS06895 354d7c2308ca24b5d55ad54580502c26 259 Pfam PF07486 Cell Wall Hydrolase 158 257 9.5E-25 T 23-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 CLI_RS06895 354d7c2308ca24b5d55ad54580502c26 259 SUPERFAMILY SSF54106 73 117 1.44E-10 T 23-04-2016 IPR018392 LysM domain CLI_RS13865 c12c8806924a11728099805cc3a76c43 298 PANTHER PTHR24220:SF160 3 267 5.2E-93 T 23-04-2016 CLI_RS13865 c12c8806924a11728099805cc3a76c43 298 Pfam PF00005 ABC transporter 17 155 4.5E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS13865 c12c8806924a11728099805cc3a76c43 298 Gene3D G3DSA:3.40.50.300 2 217 3.9E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13865 c12c8806924a11728099805cc3a76c43 298 PANTHER PTHR24220 3 267 5.2E-93 T 23-04-2016 CLI_RS13865 c12c8806924a11728099805cc3a76c43 298 SUPERFAMILY SSF52540 2 216 8.91E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13865 c12c8806924a11728099805cc3a76c43 298 SMART SM00382 26 204 9.6E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06345 50a015fe842c8ff01dbe8032f842e211 207 Gene3D G3DSA:3.40.50.300 3 204 8.0E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06345 50a015fe842c8ff01dbe8032f842e211 207 SUPERFAMILY SSF52540 3 205 7.83E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06345 50a015fe842c8ff01dbe8032f842e211 207 Pfam PF00005 ABC transporter 6 154 2.1E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS06345 50a015fe842c8ff01dbe8032f842e211 207 SMART SM00382 15 203 3.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06345 50a015fe842c8ff01dbe8032f842e211 207 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS06345 50a015fe842c8ff01dbe8032f842e211 207 PANTHER PTHR24220:SF437 2 207 1.4E-145 T 23-04-2016 CLI_RS06345 50a015fe842c8ff01dbe8032f842e211 207 PANTHER PTHR24220 2 207 1.4E-145 T 23-04-2016 CLI_RS15715 8232255998ab21f57b460ff7eec44f4e 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 75 1.0E-17 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLI_RS15715 8232255998ab21f57b460ff7eec44f4e 305 PANTHER PTHR30465 21 305 2.3E-131 T 23-04-2016 CLI_RS15715 8232255998ab21f57b460ff7eec44f4e 305 SUPERFAMILY SSF161098 98 287 3.01E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS15715 8232255998ab21f57b460ff7eec44f4e 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 305 4.7E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS15715 8232255998ab21f57b460ff7eec44f4e 305 Gene3D G3DSA:1.10.3720.10 94 301 5.2E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS15715 8232255998ab21f57b460ff7eec44f4e 305 PANTHER PTHR30465:SF75 21 305 2.3E-131 T 23-04-2016 CLI_RS17240 7b3f1ada50096b74ea7727c174a33a07 178 SUPERFAMILY SSF50475 20 128 1.23E-18 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS17240 7b3f1ada50096b74ea7727c174a33a07 178 SUPERFAMILY SSF50475 156 176 1.23E-18 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS17240 7b3f1ada50096b74ea7727c174a33a07 178 Gene3D G3DSA:2.30.110.10 21 178 1.0E-36 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS17240 7b3f1ada50096b74ea7727c174a33a07 178 Pfam PF01613 Flavin reductase like domain 18 173 3.3E-9 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 CLI_RS17240 7b3f1ada50096b74ea7727c174a33a07 178 PANTHER PTHR32145 1 167 9.0E-57 T 23-04-2016 CLI_RS17240 7b3f1ada50096b74ea7727c174a33a07 178 PANTHER PTHR32145:SF7 1 167 9.0E-57 T 23-04-2016 CLI_RS01685 5346249c7a3ebce2cb40557bab7d4819 334 PANTHER PTHR10584 1 334 1.2E-127 T 23-04-2016 CLI_RS01685 5346249c7a3ebce2cb40557bab7d4819 334 Pfam PF00294 pfkB family carbohydrate kinase 18 311 6.5E-36 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB CLI_RS01685 5346249c7a3ebce2cb40557bab7d4819 334 Gene3D G3DSA:3.40.1190.20 1 328 3.0E-76 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS01685 5346249c7a3ebce2cb40557bab7d4819 334 PANTHER PTHR10584:SF203 1 334 1.2E-127 T 23-04-2016 CLI_RS01685 5346249c7a3ebce2cb40557bab7d4819 334 SUPERFAMILY SSF53613 1 325 8.96E-69 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS15635 ecffa99d7790c784390c9255fae184ff 164 SUPERFAMILY SSF55200 76 163 1.7E-29 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CLI_RS15635 ecffa99d7790c784390c9255fae184ff 164 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 164 27.258 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CLI_RS15635 ecffa99d7790c784390c9255fae184ff 164 SUPERFAMILY SSF54364 1 72 1.12E-27 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CLI_RS15635 ecffa99d7790c784390c9255fae184ff 164 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 70 3.0E-31 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CLI_RS15635 ecffa99d7790c784390c9255fae184ff 164 PANTHER PTHR10938 1 164 1.6E-66 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CLI_RS15635 ecffa99d7790c784390c9255fae184ff 164 Gene3D G3DSA:3.10.20.80 1 72 5.8E-34 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CLI_RS15635 ecffa99d7790c784390c9255fae184ff 164 Gene3D G3DSA:3.30.110.10 73 163 9.4E-36 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CLI_RS15635 ecffa99d7790c784390c9255fae184ff 164 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 163 1.9E-66 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CLI_RS15635 ecffa99d7790c784390c9255fae184ff 164 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 77 161 4.2E-35 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CLI_RS18665 afc69b505444c641947c5f14d63d83a0 269 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 2 266 57.5 T 23-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein CLI_RS18665 afc69b505444c641947c5f14d63d83a0 269 Pfam PF03618 Kinase/pyrophosphorylase 4 260 7.6E-90 T 23-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CLI_RS18665 afc69b505444c641947c5f14d63d83a0 269 PANTHER PTHR31756 1 269 1.3E-112 T 23-04-2016 CLI_RS18665 afc69b505444c641947c5f14d63d83a0 269 PANTHER PTHR31756:SF3 1 269 1.3E-112 T 23-04-2016 CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 ProSitePatterns PS00211 ABC transporters family signature. 337 351 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 ProSitePatterns PS00211 ABC transporters family signature. 644 658 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 Gene3D G3DSA:1.20.1580.10 262 327 3.9E-35 T 23-04-2016 CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 Gene3D G3DSA:1.20.1580.10 95 145 3.9E-35 T 23-04-2016 CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 Gene3D G3DSA:3.40.50.300 635 750 4.1E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 Gene3D G3DSA:3.40.50.300 328 443 1.4E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 Gene3D G3DSA:3.40.50.300 450 513 4.1E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 Gene3D G3DSA:3.40.50.300 7 54 1.4E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 Gene3D G3DSA:1.10.8.280 147 261 8.6E-8 T 23-04-2016 CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 PANTHER PTHR32282 3 751 0.0 T 23-04-2016 CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 SMART SM00382 477 717 2.0E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 SMART SM00382 26 414 3.6 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 SUPERFAMILY SSF52540 458 720 1.13E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 Gene3D G3DSA:1.20.1580.10 517 634 2.7E-39 T 23-04-2016 CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 PANTHER PTHR32282:SF10 3 751 0.0 T 23-04-2016 CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 Pfam PF00005 ABC transporter 468 671 1.6E-15 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 SUPERFAMILY SSF52540 13 156 7.93E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14045 c2444b7a0f10e49e5000f7db39bec4bd 752 SUPERFAMILY SSF52540 282 419 7.93E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09115 0fc0316e3a401dea1def2e65a22eafb3 196 SUPERFAMILY SSF81891 2 182 6.08E-11 T 23-04-2016 CLI_RS15310 44fe6c9f21bcc8eb13cdc6b62a42b59c 246 SUPERFAMILY SSF75625 3 244 2.22E-96 T 23-04-2016 IPR029072 YebC-like CLI_RS15310 44fe6c9f21bcc8eb13cdc6b62a42b59c 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 239 4.2E-99 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CLI_RS15310 44fe6c9f21bcc8eb13cdc6b62a42b59c 246 Pfam PF01709 Transcriptional regulator 5 238 1.9E-95 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CLI_RS15310 44fe6c9f21bcc8eb13cdc6b62a42b59c 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 36.644 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CLI_RS15310 44fe6c9f21bcc8eb13cdc6b62a42b59c 246 Gene3D G3DSA:3.30.70.980 135 206 4.0E-27 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 CLI_RS15310 44fe6c9f21bcc8eb13cdc6b62a42b59c 246 PANTHER PTHR12532:SF0 1 242 1.1E-113 T 23-04-2016 CLI_RS15310 44fe6c9f21bcc8eb13cdc6b62a42b59c 246 PANTHER PTHR12532 1 242 1.1E-113 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CLI_RS15310 44fe6c9f21bcc8eb13cdc6b62a42b59c 246 Gene3D G3DSA:1.10.10.200 1 77 3.2E-35 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like CLI_RS15310 44fe6c9f21bcc8eb13cdc6b62a42b59c 246 Gene3D G3DSA:3.30.1270.10 82 134 1.1E-38 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 CLI_RS15310 44fe6c9f21bcc8eb13cdc6b62a42b59c 246 Gene3D G3DSA:3.30.1270.10 213 242 1.1E-38 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 CLI_RS01255 72de073f058e22f9e1c66ab197fb529a 279 PANTHER PTHR33434:SF3 1 279 2.1E-116 T 23-04-2016 CLI_RS01255 72de073f058e22f9e1c66ab197fb529a 279 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 276 1.5E-96 T 23-04-2016 IPR003797 DegV CLI_RS01255 72de073f058e22f9e1c66ab197fb529a 279 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 277 8.3E-95 T 23-04-2016 IPR003797 DegV CLI_RS01255 72de073f058e22f9e1c66ab197fb529a 279 Gene3D G3DSA:3.30.1180.10 154 277 1.2E-32 T 23-04-2016 CLI_RS01255 72de073f058e22f9e1c66ab197fb529a 279 PANTHER PTHR33434 1 279 2.1E-116 T 23-04-2016 CLI_RS01255 72de073f058e22f9e1c66ab197fb529a 279 Gene3D G3DSA:3.40.50.10170 3 150 6.8E-55 T 23-04-2016 CLI_RS01255 72de073f058e22f9e1c66ab197fb529a 279 SUPERFAMILY SSF82549 3 278 1.39E-86 T 23-04-2016 CLI_RS18840 9e84b06cc2db8a6a2bcc51e5594e5e67 69 PANTHER PTHR33383 2 68 2.5E-41 T 23-04-2016 CLI_RS18840 9e84b06cc2db8a6a2bcc51e5594e5e67 69 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 69 3.0E-19 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor CLI_RS18840 9e84b06cc2db8a6a2bcc51e5594e5e67 69 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 24.398 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor CLI_RS18840 9e84b06cc2db8a6a2bcc51e5594e5e67 69 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 68 3.3E-30 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor CLI_RS18840 9e84b06cc2db8a6a2bcc51e5594e5e67 69 SMART SM01234 1 68 1.8E-43 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor CLI_RS18840 9e84b06cc2db8a6a2bcc51e5594e5e67 69 Pfam PF01809 Haemolytic domain 2 68 1.3E-31 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 PRINTS PR00996 Glutamate methyltransferase family signature 214 237 2.6E-39 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 PRINTS PR00996 Glutamate methyltransferase family signature 59 71 2.6E-39 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 PRINTS PR00996 Glutamate methyltransferase family signature 97 117 2.6E-39 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 PRINTS PR00996 Glutamate methyltransferase family signature 195 209 2.6E-39 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 PRINTS PR00996 Glutamate methyltransferase family signature 22 35 2.6E-39 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 PRINTS PR00996 Glutamate methyltransferase family signature 129 145 2.6E-39 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 SMART SM00138 2 254 3.2E-88 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 SUPERFAMILY SSF53335 66 255 2.14E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 Pfam PF01739 CheR methyltransferase, SAM binding domain 66 242 4.0E-59 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 PANTHER PTHR24422 2 256 1.9E-84 T 23-04-2016 CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 Gene3D G3DSA:1.10.155.10 2 64 1.5E-10 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 Pfam PF03705 CheR methyltransferase, all-alpha domain 2 53 3.6E-14 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 SUPERFAMILY SSF47757 2 65 4.58E-13 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLI_RS13665 5bc610ab7fc3a6a0804a013b62f38e83 256 Gene3D G3DSA:3.40.50.150 65 254 1.5E-61 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS16375 3bff3d9e649b5562ee764ca67b697396 189 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 177 3.3E-15 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain CLI_RS16375 3bff3d9e649b5562ee764ca67b697396 189 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 92 3.0E-8 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLI_RS16375 3bff3d9e649b5562ee764ca67b697396 189 Pfam PF01386 Ribosomal L25p family 6 89 3.7E-12 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLI_RS16375 3bff3d9e649b5562ee764ca67b697396 189 SUPERFAMILY SSF50715 12 178 7.32E-38 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 CLI_RS16375 3bff3d9e649b5562ee764ca67b697396 189 Gene3D G3DSA:2.170.120.20 95 186 1.3E-17 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain CLI_RS16375 3bff3d9e649b5562ee764ca67b697396 189 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 180 19.166 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLI_RS16375 3bff3d9e649b5562ee764ca67b697396 189 Gene3D G3DSA:2.40.240.10 6 92 2.6E-14 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 CLI_RS16375 3bff3d9e649b5562ee764ca67b697396 189 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 14 177 2.3E-29 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLI_RS16375 3bff3d9e649b5562ee764ca67b697396 189 PANTHER PTHR33284 1 186 1.0E-44 T 23-04-2016 CLI_RS04095 7311b2824e207c68b8249eca4fa04460 153 Gene3D G3DSA:3.40.50.1810 2 124 6.8E-9 T 23-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 CLI_RS04095 7311b2824e207c68b8249eca4fa04460 153 SUPERFAMILY SSF52309 3 136 1.92E-17 T 23-04-2016 CLI_RS08095 0593b6baea3b3a4c0f180bd6066f8a17 231 PANTHER PTHR30574 39 231 1.2E-44 T 23-04-2016 CLI_RS08095 0593b6baea3b3a4c0f180bd6066f8a17 231 Pfam PF04143 Sulphur transport 66 225 1.1E-30 T 23-04-2016 IPR007272 Sulphur transport domain CLI_RS08095 0593b6baea3b3a4c0f180bd6066f8a17 231 PANTHER PTHR30574:SF1 39 231 1.2E-44 T 23-04-2016 CLI_RS14805 198b61e328ba84539e4c067ec9ca7b37 462 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 7 458 3.0E-198 T 23-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 CLI_RS14805 198b61e328ba84539e4c067ec9ca7b37 462 Pfam PF03841 L-seryl-tRNA selenium transferase 81 445 1.2E-164 T 23-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 CLI_RS14805 198b61e328ba84539e4c067ec9ca7b37 462 PANTHER PTHR32328:SF0 1 462 5.8E-244 T 23-04-2016 CLI_RS14805 198b61e328ba84539e4c067ec9ca7b37 462 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 462 211.837 T 23-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 CLI_RS14805 198b61e328ba84539e4c067ec9ca7b37 462 SUPERFAMILY SSF53383 78 462 6.88E-51 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS14805 198b61e328ba84539e4c067ec9ca7b37 462 PANTHER PTHR32328 1 462 5.8E-244 T 23-04-2016 CLI_RS14805 198b61e328ba84539e4c067ec9ca7b37 462 Pfam PF12390 Selenocysteine synthase N terminal 7 46 5.1E-7 T 23-04-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 CLI_RS14805 198b61e328ba84539e4c067ec9ca7b37 462 Gene3D G3DSA:3.40.640.10 129 316 1.4E-29 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 111 1.9E-28 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 Gene3D G3DSA:3.30.930.10 110 421 5.4E-106 T 23-04-2016 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 225 401 2.9E-26 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 SUPERFAMILY SSF55681 121 422 5.46E-75 T 23-04-2016 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 PRINTS PR00981 Seryl-tRNA synthetase signature 279 292 1.78E-20 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 PRINTS PR00981 Seryl-tRNA synthetase signature 319 332 1.78E-20 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 PRINTS PR00981 Seryl-tRNA synthetase signature 354 370 1.78E-20 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 PRINTS PR00981 Seryl-tRNA synthetase signature 267 279 1.78E-20 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 PRINTS PR00981 Seryl-tRNA synthetase signature 336 352 1.78E-20 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 418 2.5E-124 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 SUPERFAMILY SSF46589 1 117 5.75E-25 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 PIRSF PIRSF001529 1 425 3.3E-131 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 Gene3D G3DSA:1.10.287.40 1 109 3.6E-27 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 CLI_RS02775 e988f8f80fe5ec3efdc685f09a50dec4 425 PANTHER PTHR11778 1 424 6.1E-160 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CLI_RS11870 0f8ff4056c57f13fb0105f43ee974cff 476 Gene3D G3DSA:3.40.50.150 5 181 2.1E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS11870 0f8ff4056c57f13fb0105f43ee974cff 476 PANTHER PTHR10629:SF32 5 460 1.2E-44 T 23-04-2016 CLI_RS11870 0f8ff4056c57f13fb0105f43ee974cff 476 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 461 9.7E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS11870 0f8ff4056c57f13fb0105f43ee974cff 476 SUPERFAMILY SSF53335 5 234 2.87E-69 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS11870 0f8ff4056c57f13fb0105f43ee974cff 476 SUPERFAMILY SSF53335 365 460 2.87E-69 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS11870 0f8ff4056c57f13fb0105f43ee974cff 476 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 4 20 1.0E-9 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLI_RS11870 0f8ff4056c57f13fb0105f43ee974cff 476 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 109 123 1.0E-9 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLI_RS11870 0f8ff4056c57f13fb0105f43ee974cff 476 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 171 184 1.0E-9 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLI_RS11870 0f8ff4056c57f13fb0105f43ee974cff 476 Gene3D G3DSA:3.90.120.10 301 336 3.1E-19 T 23-04-2016 CLI_RS11870 0f8ff4056c57f13fb0105f43ee974cff 476 Gene3D G3DSA:3.90.120.10 391 453 3.1E-19 T 23-04-2016 CLI_RS11870 0f8ff4056c57f13fb0105f43ee974cff 476 Gene3D G3DSA:3.90.120.10 182 235 3.1E-19 T 23-04-2016 CLI_RS11870 0f8ff4056c57f13fb0105f43ee974cff 476 PANTHER PTHR10629 5 460 1.2E-44 T 23-04-2016 CLI_RS11020 b4b913c5553f0041da77c7242d16976d 199 Pfam PF00881 Nitroreductase family 9 178 2.8E-17 T 23-04-2016 IPR029479 Nitroreductase CLI_RS11020 b4b913c5553f0041da77c7242d16976d 199 Gene3D G3DSA:3.40.109.10 4 199 2.9E-70 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS11020 b4b913c5553f0041da77c7242d16976d 199 PANTHER PTHR23026:SF89 1 199 2.4E-101 T 23-04-2016 CLI_RS11020 b4b913c5553f0041da77c7242d16976d 199 SUPERFAMILY SSF55469 4 197 6.67E-69 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS11020 b4b913c5553f0041da77c7242d16976d 199 PANTHER PTHR23026 1 199 2.4E-101 T 23-04-2016 CLI_RS07945 c1808e6244397ece34bcf0786fb33a69 230 SUPERFAMILY SSF51206 21 139 4.84E-27 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CLI_RS07945 c1808e6244397ece34bcf0786fb33a69 230 PANTHER PTHR24567 1 230 9.6E-122 T 23-04-2016 CLI_RS07945 c1808e6244397ece34bcf0786fb33a69 230 Gene3D G3DSA:1.10.10.10 152 225 4.9E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07945 c1808e6244397ece34bcf0786fb33a69 230 Gene3D G3DSA:2.60.120.10 20 141 3.5E-24 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS07945 c1808e6244397ece34bcf0786fb33a69 230 Pfam PF13545 Crp-like helix-turn-helix domain 154 223 1.7E-8 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLI_RS07945 c1808e6244397ece34bcf0786fb33a69 230 SUPERFAMILY SSF46785 151 226 1.51E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07945 c1808e6244397ece34bcf0786fb33a69 230 PANTHER PTHR24567:SF26 1 230 9.6E-122 T 23-04-2016 CLI_RS07945 c1808e6244397ece34bcf0786fb33a69 230 Pfam PF00027 Cyclic nucleotide-binding domain 36 114 1.4E-12 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CLI_RS17260 2176b067528ea6bdd52833db9090b00e 140 Pfam PF13411 MerR HTH family regulatory protein 3 68 1.2E-18 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS17260 2176b067528ea6bdd52833db9090b00e 140 SMART SM00422 3 72 2.1E-22 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS17260 2176b067528ea6bdd52833db9090b00e 140 Gene3D G3DSA:1.10.1660.10 3 57 1.5E-22 T 23-04-2016 CLI_RS17260 2176b067528ea6bdd52833db9090b00e 140 SUPERFAMILY SSF46955 3 117 2.6E-32 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS17260 2176b067528ea6bdd52833db9090b00e 140 PANTHER PTHR30204:SF25 1 114 8.2E-44 T 23-04-2016 CLI_RS17260 2176b067528ea6bdd52833db9090b00e 140 Gene3D G3DSA:1.10.1660.10 58 129 1.1E-10 T 23-04-2016 CLI_RS17260 2176b067528ea6bdd52833db9090b00e 140 PANTHER PTHR30204 1 114 8.2E-44 T 23-04-2016 CLI_RS14090 c4b3f3b67a2e06417c7314c660dac9be 244 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 44.877 T 23-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 CLI_RS14090 c4b3f3b67a2e06417c7314c660dac9be 244 Gene3D G3DSA:3.40.50.1360 1 242 4.3E-99 T 23-04-2016 CLI_RS14090 c4b3f3b67a2e06417c7314c660dac9be 244 SUPERFAMILY SSF100950 1 243 2.82E-96 T 23-04-2016 CLI_RS14090 c4b3f3b67a2e06417c7314c660dac9be 244 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 23-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 CLI_RS14090 c4b3f3b67a2e06417c7314c660dac9be 244 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 243 3.0E-97 T 23-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 CLI_RS14090 c4b3f3b67a2e06417c7314c660dac9be 244 PANTHER PTHR11280 1 244 2.3E-133 T 23-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 CLI_RS14090 c4b3f3b67a2e06417c7314c660dac9be 244 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 26 227 2.1E-19 T 23-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CLI_RS16820 9e6774d78a5d94f966c73d5686802810 264 Gene3D G3DSA:3.40.50.620 1 263 3.4E-97 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS16820 9e6774d78a5d94f966c73d5686802810 264 PIRSF PIRSF000090 1 264 1.2E-93 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 CLI_RS16820 9e6774d78a5d94f966c73d5686802810 264 PANTHER PTHR21294 1 264 1.8E-126 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 CLI_RS16820 9e6774d78a5d94f966c73d5686802810 264 Pfam PF01012 Electron transfer flavoprotein domain 23 211 4.5E-49 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS16820 9e6774d78a5d94f966c73d5686802810 264 SMART SM00893 22 216 3.2E-65 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS16820 9e6774d78a5d94f966c73d5686802810 264 SUPERFAMILY SSF52402 1 259 9.77E-82 T 23-04-2016 CLI_RS16820 9e6774d78a5d94f966c73d5686802810 264 PANTHER PTHR21294:SF0 1 264 1.8E-126 T 23-04-2016 CLI_RS12575 40717c23685eebdb7712d8cb502d72ae 209 PANTHER PTHR23117 1 195 5.6E-92 T 23-04-2016 CLI_RS12575 40717c23685eebdb7712d8cb502d72ae 209 ProSitePatterns PS00856 Guanylate kinase-like signature. 38 55 - T 23-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CLI_RS12575 40717c23685eebdb7712d8cb502d72ae 209 Hamap MF_00328 Guanylate kinase [gmk]. 3 185 36.366 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CLI_RS12575 40717c23685eebdb7712d8cb502d72ae 209 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 182 5.0E-73 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CLI_RS12575 40717c23685eebdb7712d8cb502d72ae 209 PANTHER PTHR23117:SF13 1 195 5.6E-92 T 23-04-2016 CLI_RS12575 40717c23685eebdb7712d8cb502d72ae 209 SUPERFAMILY SSF52540 3 187 5.41E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12575 40717c23685eebdb7712d8cb502d72ae 209 SMART SM00072 4 185 5.6E-62 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CLI_RS12575 40717c23685eebdb7712d8cb502d72ae 209 Gene3D G3DSA:3.30.63.10 33 85 1.1E-26 T 23-04-2016 CLI_RS12575 40717c23685eebdb7712d8cb502d72ae 209 Gene3D G3DSA:3.40.50.300 86 200 1.2E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12575 40717c23685eebdb7712d8cb502d72ae 209 Gene3D G3DSA:3.40.50.300 2 27 1.2E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12575 40717c23685eebdb7712d8cb502d72ae 209 Pfam PF00625 Guanylate kinase 7 183 8.5E-49 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CLI_RS05265 c72cb1828f3f1377a1947d9378f81317 262 PIRSF PIRSF000090 1 262 4.2E-85 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 CLI_RS05265 c72cb1828f3f1377a1947d9378f81317 262 Pfam PF01012 Electron transfer flavoprotein domain 22 207 7.7E-46 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS05265 c72cb1828f3f1377a1947d9378f81317 262 SUPERFAMILY SSF52402 1 258 3.0E-75 T 23-04-2016 CLI_RS05265 c72cb1828f3f1377a1947d9378f81317 262 PANTHER PTHR21294 1 262 7.8E-92 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 CLI_RS05265 c72cb1828f3f1377a1947d9378f81317 262 SMART SM00893 22 213 1.5E-58 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CLI_RS05265 c72cb1828f3f1377a1947d9378f81317 262 Gene3D G3DSA:3.40.50.620 1 260 1.2E-85 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS05265 c72cb1828f3f1377a1947d9378f81317 262 PANTHER PTHR21294:SF0 1 262 7.8E-92 T 23-04-2016 CLI_RS03070 c7764fe48bb06215a0db03b3deee9a26 282 PANTHER PTHR14136 1 263 9.7E-51 T 23-04-2016 CLI_RS03070 c7764fe48bb06215a0db03b3deee9a26 282 Pfam PF00805 Pentapeptide repeats (8 copies) 212 249 5.2E-10 T 23-04-2016 IPR001646 Pentapeptide repeat CLI_RS03070 c7764fe48bb06215a0db03b3deee9a26 282 SUPERFAMILY SSF141571 171 277 3.27E-19 T 23-04-2016 CLI_RS03070 c7764fe48bb06215a0db03b3deee9a26 282 SUPERFAMILY SSF141571 59 92 3.27E-19 T 23-04-2016 CLI_RS03070 c7764fe48bb06215a0db03b3deee9a26 282 PANTHER PTHR14136:SF0 1 263 9.7E-51 T 23-04-2016 CLI_RS08145 c39004dcae7062514d8f8ebc4c1c37b4 219 Pfam PF00072 Response regulator receiver domain 4 112 7.2E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS08145 c39004dcae7062514d8f8ebc4c1c37b4 219 SMART SM00448 2 111 1.2E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS08145 c39004dcae7062514d8f8ebc4c1c37b4 219 Gene3D G3DSA:1.10.10.10 122 218 3.4E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08145 c39004dcae7062514d8f8ebc4c1c37b4 219 PANTHER PTHR26402:SF261 2 219 3.3E-90 T 23-04-2016 CLI_RS08145 c39004dcae7062514d8f8ebc4c1c37b4 219 SUPERFAMILY SSF46894 118 218 7.37E-23 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS08145 c39004dcae7062514d8f8ebc4c1c37b4 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 217 1.4E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS08145 c39004dcae7062514d8f8ebc4c1c37b4 219 PANTHER PTHR26402 2 219 3.3E-90 T 23-04-2016 CLI_RS08145 c39004dcae7062514d8f8ebc4c1c37b4 219 Gene3D G3DSA:3.40.50.2300 2 121 1.9E-33 T 23-04-2016 CLI_RS08145 c39004dcae7062514d8f8ebc4c1c37b4 219 SMART SM00862 144 218 8.3E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS08145 c39004dcae7062514d8f8ebc4c1c37b4 219 SUPERFAMILY SSF52172 2 127 2.28E-34 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS02895 026c1358d9edc02f37edfdbea262a0db 196 Gene3D G3DSA:2.30.30.110 81 196 3.7E-36 T 23-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLI_RS02895 026c1358d9edc02f37edfdbea262a0db 196 PANTHER PTHR33988:SF2 77 196 1.2E-45 T 23-04-2016 CLI_RS02895 026c1358d9edc02f37edfdbea262a0db 196 SUPERFAMILY SSF50118 80 195 1.44E-27 T 23-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLI_RS02895 026c1358d9edc02f37edfdbea262a0db 196 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 83 194 1.4E-29 T 23-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 CLI_RS02895 026c1358d9edc02f37edfdbea262a0db 196 PANTHER PTHR33988 77 196 1.2E-45 T 23-04-2016 CLI_RS13520 1b71acea77b02789be2d89b695349cc3 330 Gene3D G3DSA:3.90.25.10 193 323 2.2E-33 T 23-04-2016 CLI_RS13520 1b71acea77b02789be2d89b695349cc3 330 Gene3D G3DSA:3.40.50.720 6 192 2.5E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS13520 1b71acea77b02789be2d89b695349cc3 330 PANTHER PTHR10366 7 315 1.0E-140 T 23-04-2016 CLI_RS13520 1b71acea77b02789be2d89b695349cc3 330 SUPERFAMILY SSF51735 2 322 2.29E-93 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS13520 1b71acea77b02789be2d89b695349cc3 330 PANTHER PTHR10366:SF253 7 315 1.0E-140 T 23-04-2016 CLI_RS13520 1b71acea77b02789be2d89b695349cc3 330 TIGRFAM TIGR04180 EDH_00030: NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family 8 304 9.7E-160 T 23-04-2016 IPR026390 NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family CLI_RS13520 1b71acea77b02789be2d89b695349cc3 330 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 312 6.2E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01785 25f366f0ba2731e2fc71984e25855ffd 190 PANTHER PTHR11776 2 188 4.0E-81 T 23-04-2016 CLI_RS01785 25f366f0ba2731e2fc71984e25855ffd 190 Gene3D G3DSA:3.40.50.2020 2 188 3.0E-59 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS01785 25f366f0ba2731e2fc71984e25855ffd 190 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 189 1.7E-75 T 23-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 CLI_RS01785 25f366f0ba2731e2fc71984e25855ffd 190 SUPERFAMILY SSF53271 2 187 8.52E-43 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS01785 25f366f0ba2731e2fc71984e25855ffd 190 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 38.8 T 23-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 CLI_RS01785 25f366f0ba2731e2fc71984e25855ffd 190 PANTHER PTHR11776:SF1 2 188 4.0E-81 T 23-04-2016 CLI_RS01785 25f366f0ba2731e2fc71984e25855ffd 190 Pfam PF00156 Phosphoribosyl transferase domain 34 157 1.5E-8 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS06870 5bca64440a278e62d5037caaad455b0f 481 PANTHER PTHR32024 1 480 1.4E-233 T 23-04-2016 CLI_RS06870 5bca64440a278e62d5037caaad455b0f 481 PANTHER PTHR32024:SF2 1 480 1.4E-233 T 23-04-2016 CLI_RS06870 5bca64440a278e62d5037caaad455b0f 481 Pfam PF02386 Cation transport protein 39 475 1.7E-52 T 23-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CLI_RS06870 5bca64440a278e62d5037caaad455b0f 481 PIRSF PIRSF006247 1 480 1.2E-162 T 23-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CLI_RS15530 6b76504eaa2ebd339d1c50241669f744 178 Gene3D G3DSA:2.170.120.20 97 175 2.2E-21 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain CLI_RS15530 6b76504eaa2ebd339d1c50241669f744 178 Pfam PF01386 Ribosomal L25p family 7 87 5.9E-20 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLI_RS15530 6b76504eaa2ebd339d1c50241669f744 178 SUPERFAMILY SSF50715 3 176 1.31E-42 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 CLI_RS15530 6b76504eaa2ebd339d1c50241669f744 178 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 13 90 9.0E-20 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLI_RS15530 6b76504eaa2ebd339d1c50241669f744 178 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 2 177 21.639 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLI_RS15530 6b76504eaa2ebd339d1c50241669f744 178 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 13 175 1.3E-38 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLI_RS15530 6b76504eaa2ebd339d1c50241669f744 178 PANTHER PTHR33284 1 176 3.4E-47 T 23-04-2016 CLI_RS15530 6b76504eaa2ebd339d1c50241669f744 178 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 97 175 4.7E-19 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain CLI_RS15530 6b76504eaa2ebd339d1c50241669f744 178 Gene3D G3DSA:2.40.240.10 3 90 3.8E-25 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 CLI_RS17690 241b6af0defb6b21c0e0f235eba5301e 113 PANTHER PTHR14413 1 113 1.4E-57 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17690 241b6af0defb6b21c0e0f235eba5301e 113 Pfam PF01196 Ribosomal protein L17 17 113 2.0E-40 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17690 241b6af0defb6b21c0e0f235eba5301e 113 SUPERFAMILY SSF64263 3 113 1.57E-46 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17690 241b6af0defb6b21c0e0f235eba5301e 113 Gene3D G3DSA:3.90.1030.10 3 113 5.9E-50 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17690 241b6af0defb6b21c0e0f235eba5301e 113 ProSitePatterns PS01167 Ribosomal protein L17 signature. 31 53 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17690 241b6af0defb6b21c0e0f235eba5301e 113 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 2 113 29.097 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17690 241b6af0defb6b21c0e0f235eba5301e 113 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 113 6.4E-48 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1185 22.912 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 Pfam PF06470 SMC proteins Flexible Hinge Domain 530 642 4.4E-27 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 PANTHER PTHR18937 529 1184 0.0 T 23-04-2016 CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 PANTHER PTHR18937 1 510 0.0 T 23-04-2016 CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 SUPERFAMILY SSF52540 1082 1169 1.15E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 SUPERFAMILY SSF52540 1 212 1.15E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 SUPERFAMILY SSF75553 486 693 1.11E-51 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 SMART SM00968 526 642 7.6E-37 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1176 7.4E-49 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 SUPERFAMILY SSF57997 293 489 2.55E-7 T 23-04-2016 CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 PIRSF PIRSF005719 1 1191 4.1E-302 T 23-04-2016 IPR024704 Structural maintenance of chromosomes protein CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 PANTHER PTHR18937:SF171 529 1184 0.0 T 23-04-2016 CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 PANTHER PTHR18937:SF171 1 510 0.0 T 23-04-2016 CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1183 0.0 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 Gene3D G3DSA:3.40.50.300 1 253 2.6E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12235 4dc4da6e7abf22ee8e995f42b2b3c0c4 1193 Gene3D G3DSA:3.40.50.300 1008 1183 1.0E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17425 06b20dcbbcc446c61e4bcd138fef50c0 107 PANTHER PTHR41242:SF1 1 93 6.4E-30 T 23-04-2016 CLI_RS17425 06b20dcbbcc446c61e4bcd138fef50c0 107 SUPERFAMILY SSF47598 5 46 5.56E-5 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 CLI_RS17425 06b20dcbbcc446c61e4bcd138fef50c0 107 PANTHER PTHR41242 1 93 6.4E-30 T 23-04-2016 CLI_RS17215 9b30f9da0cdc48c2f9a091c4ae4547ef 199 Gene3D G3DSA:1.10.443.10 10 189 9.7E-37 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS17215 9b30f9da0cdc48c2f9a091c4ae4547ef 199 PANTHER PTHR30349 1 197 2.5E-51 T 23-04-2016 CLI_RS17215 9b30f9da0cdc48c2f9a091c4ae4547ef 199 Pfam PF00589 Phage integrase family 10 176 8.2E-31 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS17215 9b30f9da0cdc48c2f9a091c4ae4547ef 199 PANTHER PTHR30349:SF11 1 197 2.5E-51 T 23-04-2016 CLI_RS17215 9b30f9da0cdc48c2f9a091c4ae4547ef 199 SUPERFAMILY SSF56349 7 192 1.82E-36 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLI_RS04000 2bd8a074149fb625e0e284c9aa47f958 138 SUPERFAMILY SSF52788 4 127 3.01E-27 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLI_RS04000 2bd8a074149fb625e0e284c9aa47f958 138 PANTHER PTHR11717 2 137 4.5E-30 T 23-04-2016 CLI_RS04000 2bd8a074149fb625e0e284c9aa47f958 138 PANTHER PTHR11717:SF18 2 137 4.5E-30 T 23-04-2016 CLI_RS04000 2bd8a074149fb625e0e284c9aa47f958 138 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 125 4.9E-12 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLI_RS04000 2bd8a074149fb625e0e284c9aa47f958 138 Gene3D G3DSA:3.40.50.270 1 126 5.3E-31 T 23-04-2016 CLI_RS04000 2bd8a074149fb625e0e284c9aa47f958 138 SMART SM00226 3 128 1.5E-13 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLI_RS12315 048573e2185a7bf8fcb6c0e775ab44f8 372 SUPERFAMILY SSF142984 255 309 8.76E-5 T 23-04-2016 CLI_RS12315 048573e2185a7bf8fcb6c0e775ab44f8 372 PANTHER PTHR11780 1 309 2.9E-111 T 23-04-2016 CLI_RS12315 048573e2185a7bf8fcb6c0e775ab44f8 372 Pfam PF13375 RnfC Barrel sandwich hybrid domain 3 61 1.3E-13 T 23-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain CLI_RS12315 048573e2185a7bf8fcb6c0e775ab44f8 372 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 85 227 3.4E-44 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CLI_RS12315 048573e2185a7bf8fcb6c0e775ab44f8 372 TIGRFAM TIGR04481 PR_assoc_PrdC: proline reductase-associated electron transfer protein PrdC 6 371 1.2E-158 T 23-04-2016 IPR031001 Proline reductase-associated electron transfer protein PrdC CLI_RS12315 048573e2185a7bf8fcb6c0e775ab44f8 372 PANTHER PTHR11780:SF1 1 309 2.9E-111 T 23-04-2016 CLI_RS12315 048573e2185a7bf8fcb6c0e775ab44f8 372 SUPERFAMILY SSF142019 42 245 9.55E-52 T 23-04-2016 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 45 63 1.09E-62 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 183 203 1.09E-62 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 296 322 1.09E-62 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 65 88 1.09E-62 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 128 147 1.09E-62 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 SUPERFAMILY SSF53067 8 144 1.4E-41 T 23-04-2016 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 Gene3D G3DSA:3.30.420.40 8 155 2.2E-48 T 23-04-2016 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 SUPERFAMILY SSF53067 145 327 5.19E-52 T 23-04-2016 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 Gene3D G3DSA:3.30.420.40 156 182 5.2E-37 T 23-04-2016 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 Gene3D G3DSA:3.30.420.40 259 313 5.2E-37 T 23-04-2016 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 331 1.1E-156 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 Gene3D G3DSA:3.90.640.10 183 255 8.4E-37 T 23-04-2016 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 Pfam PF06723 MreB/Mbl protein 8 331 5.8E-157 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 PANTHER PTHR19375:SF117 7 322 1.4E-170 T 23-04-2016 CLI_RS14935 36b01b11c8505f0766dd06bc4365244a 336 PANTHER PTHR19375 7 322 1.4E-170 T 23-04-2016 CLI_RS07195 abb36d3dc43831814313bd10e4e6d05f 392 Pfam PF12698 ABC-2 family transporter protein 21 379 1.9E-22 T 23-04-2016 CLI_RS07195 abb36d3dc43831814313bd10e4e6d05f 392 PANTHER PTHR30294 2 379 2.7E-101 T 23-04-2016 CLI_RS07195 abb36d3dc43831814313bd10e4e6d05f 392 PANTHER PTHR30294:SF21 2 379 2.7E-101 T 23-04-2016 CLI_RS04700 0d153459e1001462a3fb5aff3a517390 232 PANTHER PTHR40609:SF2 1 232 3.7E-125 T 23-04-2016 CLI_RS04700 0d153459e1001462a3fb5aff3a517390 232 TIGRFAM TIGR04501 microcomp_PduB: microcompartment protein PduB 8 232 6.7E-120 T 23-04-2016 IPR030984 Microcompartment protein PduB GO:0005198 CLI_RS04700 0d153459e1001462a3fb5aff3a517390 232 PANTHER PTHR40609 1 232 3.7E-125 T 23-04-2016 CLI_RS04700 0d153459e1001462a3fb5aff3a517390 232 SUPERFAMILY SSF143414 41 118 7.19E-8 T 23-04-2016 CLI_RS04700 0d153459e1001462a3fb5aff3a517390 232 Pfam PF00936 BMC domain 42 110 3.5E-11 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS04700 0d153459e1001462a3fb5aff3a517390 232 Pfam PF00936 BMC domain 148 213 1.6E-13 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS04700 0d153459e1001462a3fb5aff3a517390 232 PIRSF PIRSF012290 1 232 1.8E-89 T 23-04-2016 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 CLI_RS04700 0d153459e1001462a3fb5aff3a517390 232 SMART SM00877 147 226 5.9E-12 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS04700 0d153459e1001462a3fb5aff3a517390 232 SMART SM00877 41 123 7.7E-10 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS04700 0d153459e1001462a3fb5aff3a517390 232 SUPERFAMILY SSF143414 147 216 6.54E-11 T 23-04-2016 CLI_RS03120 957c0eeaad3b0addc6886d8175917331 34 TIGRFAM TIGR04333 Clo7Bot_mod_Cys: Cys-rich peptide, Clo7bot family 1 33 1.8E-17 T 23-04-2016 IPR027601 Cys-rich peptide, Clo7bot family CLI_RS10870 9f7e6e6ff7b03ca8fa34054f860ca327 367 Pfam PF09700 CRISPR-associated protein (Cas_Cmr3) 5 362 1.5E-25 T 23-04-2016 IPR019117 CRISPR-associated protein, Cmr3 CLI_RS04110 18aade44e8f5c9cf60fedf48555ae7ff 404 Pfam PF01547 Bacterial extracellular solute-binding protein 55 324 1.2E-5 T 23-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 CLI_RS04110 18aade44e8f5c9cf60fedf48555ae7ff 404 Gene3D G3DSA:3.40.190.10 54 161 2.5E-10 T 23-04-2016 CLI_RS04110 18aade44e8f5c9cf60fedf48555ae7ff 404 TIGRFAM TIGR04541 thiaminase_BcmE: thiamine pyridinylase 11 392 6.9E-215 T 23-04-2016 IPR030901 Thiamine pyridinylase KEGG: 00730+2.5.1.2 CLI_RS04110 18aade44e8f5c9cf60fedf48555ae7ff 404 SUPERFAMILY SSF53850 39 401 2.65E-46 T 23-04-2016 CLI_RS04110 18aade44e8f5c9cf60fedf48555ae7ff 404 Gene3D G3DSA:3.40.190.10 162 333 1.5E-87 T 23-04-2016 CLI_RS11105 fbcbf31c6c1e3fe8c773799906598e01 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 111 9.5E-27 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CLI_RS11105 fbcbf31c6c1e3fe8c773799906598e01 113 PANTHER PTHR34535 2 113 2.8E-56 T 23-04-2016 CLI_RS11105 fbcbf31c6c1e3fe8c773799906598e01 113 PANTHER PTHR34535:SF2 2 113 2.8E-56 T 23-04-2016 CLI_RS11105 fbcbf31c6c1e3fe8c773799906598e01 113 PIRSF PIRSF004761 1 113 1.9E-27 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CLI_RS11105 fbcbf31c6c1e3fe8c773799906598e01 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 111 1.3E-26 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 1.0E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 1.0E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 PANTHER PTHR11751:SF347 118 140 2.5E-35 T 23-04-2016 CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 PANTHER PTHR11751:SF347 1 70 2.5E-35 T 23-04-2016 CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 4 235 1.4E-90 T 23-04-2016 IPR012770 Trehalose operon transcriptional repressor CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 SUPERFAMILY SSF46785 3 76 8.91E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 Pfam PF07702 UTRA domain 90 228 1.0E-32 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 SUPERFAMILY SSF64288 73 232 5.81E-43 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 PANTHER PTHR11751 118 140 2.5E-35 T 23-04-2016 CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 PANTHER PTHR11751 1 70 2.5E-35 T 23-04-2016 CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 SMART SM00345 8 67 1.0E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 SMART SM00866 89 228 2.0E-28 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 4.5E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 Gene3D G3DSA:3.40.1410.10 64 235 3.2E-54 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLI_RS10065 b56ded0455f8fc91fe5c8524b0fea62e 236 Gene3D G3DSA:1.10.10.10 3 63 1.5E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06025 f36d729ba2084e1e4e28bb4b090c0ed2 139 SUPERFAMILY SSF54637 2 129 1.11E-35 T 23-04-2016 IPR029069 HotDog domain CLI_RS06025 f36d729ba2084e1e4e28bb4b090c0ed2 139 Pfam PF13279 Thioesterase-like superfamily 13 117 2.0E-11 T 23-04-2016 CLI_RS06025 f36d729ba2084e1e4e28bb4b090c0ed2 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 10 123 7.7E-27 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CLI_RS06025 f36d729ba2084e1e4e28bb4b090c0ed2 139 PANTHER PTHR31793 5 139 4.6E-44 T 23-04-2016 CLI_RS06025 f36d729ba2084e1e4e28bb4b090c0ed2 139 PANTHER PTHR31793:SF9 5 139 4.6E-44 T 23-04-2016 CLI_RS06025 f36d729ba2084e1e4e28bb4b090c0ed2 139 PIRSF PIRSF003230 2 139 7.3E-35 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CLI_RS06025 f36d729ba2084e1e4e28bb4b090c0ed2 139 Gene3D G3DSA:3.10.129.10 3 130 5.4E-41 T 23-04-2016 IPR029069 HotDog domain CLI_RS02585 38611ad696091a065d75218076907979 174 Pfam PF12822 Protein of unknown function (DUF3816) 7 162 2.5E-16 T 23-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 CLI_RS10160 3e939aad80da7a14dbd7891573d81b88 434 PANTHER PTHR30501 2 434 2.7E-130 T 23-04-2016 CLI_RS10160 3e939aad80da7a14dbd7891573d81b88 434 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 9 431 34.214 T 23-04-2016 IPR021144 Uncharacterised protein family UPF0597 CLI_RS10160 3e939aad80da7a14dbd7891573d81b88 434 PANTHER PTHR30501:SF2 2 434 2.7E-130 T 23-04-2016 CLI_RS10160 3e939aad80da7a14dbd7891573d81b88 434 Pfam PF03313 Serine dehydratase alpha chain 190 426 2.0E-49 T 23-04-2016 IPR005130 Serine dehydratase-like, alpha subunit CLI_RS10160 3e939aad80da7a14dbd7891573d81b88 434 PIRSF PIRSF006054 6 432 7.8E-131 T 23-04-2016 IPR021144 Uncharacterised protein family UPF0597 CLI_RS08065 6e444a51c48058e79c880b55a3bb6aea 201 PIRSF PIRSF000495 1 201 7.5E-72 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CLI_RS08065 6e444a51c48058e79c880b55a3bb6aea 201 Gene3D G3DSA:3.40.50.880 2 200 1.2E-73 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS08065 6e444a51c48058e79c880b55a3bb6aea 201 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 199 35.924 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CLI_RS08065 6e444a51c48058e79c880b55a3bb6aea 201 Pfam PF00117 Glutamine amidotransferase class-I 4 194 4.8E-23 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CLI_RS08065 6e444a51c48058e79c880b55a3bb6aea 201 PANTHER PTHR21235 2 200 1.2E-91 T 23-04-2016 CLI_RS08065 6e444a51c48058e79c880b55a3bb6aea 201 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 198 3.3E-76 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CLI_RS08065 6e444a51c48058e79c880b55a3bb6aea 201 SUPERFAMILY SSF52317 2 200 6.02E-56 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS08065 6e444a51c48058e79c880b55a3bb6aea 201 PANTHER PTHR21235:SF1 2 200 1.2E-91 T 23-04-2016 CLI_RS17275 e6b007c4d16dc74f097739861964f58d 133 PANTHER PTHR33221 2 129 1.9E-76 T 23-04-2016 CLI_RS17275 e6b007c4d16dc74f097739861964f58d 133 Gene3D G3DSA:1.10.10.10 1 129 4.2E-39 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17275 e6b007c4d16dc74f097739861964f58d 133 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 127 2.0E-40 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CLI_RS17275 e6b007c4d16dc74f097739861964f58d 133 PANTHER PTHR33221:SF8 2 129 1.9E-76 T 23-04-2016 CLI_RS17275 e6b007c4d16dc74f097739861964f58d 133 Pfam PF02082 Transcriptional regulator 1 83 1.1E-27 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CLI_RS17275 e6b007c4d16dc74f097739861964f58d 133 SUPERFAMILY SSF46785 2 129 3.71E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05010 4d336a6ee68a92fe78e8ef0625d5ab3c 252 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 5 249 1.3E-101 T 23-04-2016 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 CLI_RS05010 4d336a6ee68a92fe78e8ef0625d5ab3c 252 Gene3D G3DSA:3.30.950.10 113 231 4.6E-34 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 CLI_RS05010 4d336a6ee68a92fe78e8ef0625d5ab3c 252 Gene3D G3DSA:3.40.1010.10 3 112 1.4E-33 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CLI_RS05010 4d336a6ee68a92fe78e8ef0625d5ab3c 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 209 9.1E-44 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS05010 4d336a6ee68a92fe78e8ef0625d5ab3c 252 PANTHER PTHR21091 1 209 1.9E-73 T 23-04-2016 CLI_RS05010 4d336a6ee68a92fe78e8ef0625d5ab3c 252 SUPERFAMILY SSF53790 3 249 1.57E-66 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS05010 4d336a6ee68a92fe78e8ef0625d5ab3c 252 PANTHER PTHR21091:SF17 1 209 1.9E-73 T 23-04-2016 CLI_RS05010 4d336a6ee68a92fe78e8ef0625d5ab3c 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CLI_RS16180 c5cec6213d29c6e3a970329d9d23fe64 231 Gene3D G3DSA:2.40.440.10 39 149 3.1E-33 T 23-04-2016 CLI_RS16180 c5cec6213d29c6e3a970329d9d23fe64 231 Pfam PF03734 L,D-transpeptidase catalytic domain 44 149 2.7E-20 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 CLI_RS16180 c5cec6213d29c6e3a970329d9d23fe64 231 Gene3D G3DSA:1.10.101.10 162 225 3.7E-12 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS16180 c5cec6213d29c6e3a970329d9d23fe64 231 Pfam PF01471 Putative peptidoglycan binding domain 169 212 2.9E-9 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS16180 c5cec6213d29c6e3a970329d9d23fe64 231 SUPERFAMILY SSF141523 40 150 4.58E-31 T 23-04-2016 CLI_RS16180 c5cec6213d29c6e3a970329d9d23fe64 231 SUPERFAMILY SSF47090 160 226 1.79E-13 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS16180 c5cec6213d29c6e3a970329d9d23fe64 231 PANTHER PTHR30582 8 226 1.3E-39 T 23-04-2016 CLI_RS08665 e20923ea19a6c4f040f3b674efcacfa9 297 SMART SM00260 11 144 1.5E-17 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLI_RS08665 e20923ea19a6c4f040f3b674efcacfa9 297 PIRSF PIRSF002867 1 297 5.7E-93 T 23-04-2016 IPR024181 Chemotaxis response regulator CheV CLI_RS08665 e20923ea19a6c4f040f3b674efcacfa9 297 Gene3D G3DSA:2.30.30.40 7 40 7.4E-4 T 23-04-2016 CLI_RS08665 e20923ea19a6c4f040f3b674efcacfa9 297 Gene3D G3DSA:2.30.30.40 76 118 5.0E-7 T 23-04-2016 CLI_RS08665 e20923ea19a6c4f040f3b674efcacfa9 297 SMART SM00448 169 292 7.6E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS08665 e20923ea19a6c4f040f3b674efcacfa9 297 PANTHER PTHR26402 169 297 4.4E-27 T 23-04-2016 CLI_RS08665 e20923ea19a6c4f040f3b674efcacfa9 297 SUPERFAMILY SSF52172 165 296 1.11E-25 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS08665 e20923ea19a6c4f040f3b674efcacfa9 297 SUPERFAMILY SSF50341 5 148 6.54E-32 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLI_RS08665 e20923ea19a6c4f040f3b674efcacfa9 297 Gene3D G3DSA:3.40.50.2300 167 296 1.0E-27 T 23-04-2016 CLI_RS08665 e20923ea19a6c4f040f3b674efcacfa9 297 Pfam PF00072 Response regulator receiver domain 171 292 2.6E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS08665 e20923ea19a6c4f040f3b674efcacfa9 297 Pfam PF01584 CheW-like domain 16 146 6.4E-26 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLI_RS02650 aa4ac7c6efaa97848cd047832027bf83 338 Gene3D G3DSA:2.120.10.60 52 209 1.4E-6 T 23-04-2016 CLI_RS02650 aa4ac7c6efaa97848cd047832027bf83 338 Gene3D G3DSA:2.120.10.30 221 312 4.7E-4 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS02650 aa4ac7c6efaa97848cd047832027bf83 338 SUPERFAMILY SSF82171 48 262 8.24E-10 T 23-04-2016 CLI_RS03220 b690b01a7284315dfd4e0ea05e5daadf 106 Pfam PF03551 Transcriptional regulator PadR-like family 19 87 7.5E-14 T 23-04-2016 IPR005149 Transcription regulator PadR, N-terminal CLI_RS03220 b690b01a7284315dfd4e0ea05e5daadf 106 PANTHER PTHR33169 1 106 9.1E-38 T 23-04-2016 CLI_RS03220 b690b01a7284315dfd4e0ea05e5daadf 106 PANTHER PTHR33169:SF13 1 106 9.1E-38 T 23-04-2016 CLI_RS03220 b690b01a7284315dfd4e0ea05e5daadf 106 SUPERFAMILY SSF46785 18 92 9.45E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03220 b690b01a7284315dfd4e0ea05e5daadf 106 Gene3D G3DSA:1.10.10.10 17 105 1.2E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14010 a2dceabc8b5991fbe58916d718838a54 349 SUPERFAMILY SSF100879 235 335 1.04E-28 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14010 a2dceabc8b5991fbe58916d718838a54 349 Hamap MF_01113 DNA polymerase IV [dinB]. 2 346 38.109 T 23-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14010 a2dceabc8b5991fbe58916d718838a54 349 SUPERFAMILY SSF56672 2 231 5.69E-85 T 23-04-2016 CLI_RS14010 a2dceabc8b5991fbe58916d718838a54 349 Pfam PF11798 IMS family HHH motif 165 194 7.7E-7 T 23-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14010 a2dceabc8b5991fbe58916d718838a54 349 Gene3D G3DSA:3.30.1490.100 239 346 5.0E-35 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14010 a2dceabc8b5991fbe58916d718838a54 349 Pfam PF00817 impB/mucB/samB family 8 151 1.3E-47 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14010 a2dceabc8b5991fbe58916d718838a54 349 Gene3D G3DSA:1.10.150.20 164 232 2.7E-19 T 23-04-2016 CLI_RS14010 a2dceabc8b5991fbe58916d718838a54 349 PANTHER PTHR11076 1 336 2.0E-138 T 23-04-2016 CLI_RS14010 a2dceabc8b5991fbe58916d718838a54 349 Pfam PF11799 impB/mucB/samB family C-terminal domain 234 338 4.4E-17 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS14010 a2dceabc8b5991fbe58916d718838a54 349 Gene3D G3DSA:3.30.70.270 66 160 6.7E-31 T 23-04-2016 CLI_RS13900 ef99c8fef9798f2affdd56c665f9eb27 377 PANTHER PTHR34975 1 369 2.2E-149 T 23-04-2016 CLI_RS13900 ef99c8fef9798f2affdd56c665f9eb27 377 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 8 362 4.6E-109 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS13900 ef99c8fef9798f2affdd56c665f9eb27 377 PANTHER PTHR34975:SF2 1 369 2.2E-149 T 23-04-2016 CLI_RS13900 ef99c8fef9798f2affdd56c665f9eb27 377 Pfam PF03845 Spore germination protein 9 321 3.5E-55 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS16170 32ebaec165bede71e1ea8223be2762d5 167 PIRSF PIRSF031501 1 165 2.8E-49 T 23-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 CLI_RS16170 32ebaec165bede71e1ea8223be2762d5 167 Pfam PF06177 QueT transporter 11 157 6.4E-48 T 23-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 CLI_RS16170 32ebaec165bede71e1ea8223be2762d5 167 PANTHER PTHR40044 2 167 2.1E-57 T 23-04-2016 CLI_RS16170 32ebaec165bede71e1ea8223be2762d5 167 PANTHER PTHR40044:SF1 2 167 2.1E-57 T 23-04-2016 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 Gene3D G3DSA:3.40.47.10 142 193 1.2E-71 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 Gene3D G3DSA:3.40.47.10 276 391 1.2E-71 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 PIRSF PIRSF000429 1 392 9.0E-142 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 Gene3D G3DSA:3.40.47.10 4 123 6.9E-82 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 Gene3D G3DSA:3.40.47.10 194 275 6.9E-82 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.0E-109 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 3.4E-53 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 SUPERFAMILY SSF53901 270 391 1.13E-45 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 2.4E-156 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 PANTHER PTHR18919 1 392 3.1E-250 T 23-04-2016 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 SUPERFAMILY SSF53901 3 269 1.48E-94 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS16285 4c142533b8a3ad30b2fa0f1e9f905f54 392 PANTHER PTHR18919:SF95 1 392 3.1E-250 T 23-04-2016 CLI_RS15745 68256e07dde08b325280536bb125acfd 389 Gene3D G3DSA:3.40.640.10 48 255 2.9E-62 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS15745 68256e07dde08b325280536bb125acfd 389 Pfam PF00155 Aminotransferase class I and II 33 379 1.6E-67 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS15745 68256e07dde08b325280536bb125acfd 389 PANTHER PTHR11751:SF404 17 389 2.6E-198 T 23-04-2016 CLI_RS15745 68256e07dde08b325280536bb125acfd 389 Gene3D G3DSA:3.90.1150.10 256 385 2.7E-44 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS15745 68256e07dde08b325280536bb125acfd 389 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 CLI_RS15745 68256e07dde08b325280536bb125acfd 389 PANTHER PTHR11751 17 389 2.6E-198 T 23-04-2016 CLI_RS15745 68256e07dde08b325280536bb125acfd 389 SUPERFAMILY SSF53383 10 386 1.84E-108 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS17055 708e66a2ce2e9b825f7dfca9d5ef6a40 124 Gene3D G3DSA:2.60.40.730 5 123 8.4E-51 T 23-04-2016 CLI_RS17055 708e66a2ce2e9b825f7dfca9d5ef6a40 124 SUPERFAMILY SSF49367 40 123 1.96E-33 T 23-04-2016 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 CLI_RS17055 708e66a2ce2e9b825f7dfca9d5ef6a40 124 TIGRFAM TIGR00319 desulf_FeS4: desulfoferrodoxin FeS4 iron-binding domain 2 34 5.1E-17 T 23-04-2016 IPR004462 Desulfoferrodoxin Dfx GO:0005506 CLI_RS17055 708e66a2ce2e9b825f7dfca9d5ef6a40 124 Pfam PF01880 Desulfoferrodoxin 42 123 1.3E-21 T 23-04-2016 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 CLI_RS17055 708e66a2ce2e9b825f7dfca9d5ef6a40 124 PANTHER PTHR36541:SF1 5 123 4.7E-39 T 23-04-2016 CLI_RS17055 708e66a2ce2e9b825f7dfca9d5ef6a40 124 PANTHER PTHR36541 5 123 4.7E-39 T 23-04-2016 CLI_RS17055 708e66a2ce2e9b825f7dfca9d5ef6a40 124 Pfam PF06397 Desulfoferrodoxin, N-terminal domain 5 37 9.1E-18 T 23-04-2016 IPR004462 Desulfoferrodoxin Dfx GO:0005506 CLI_RS17055 708e66a2ce2e9b825f7dfca9d5ef6a40 124 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 41 123 1.5E-24 T 23-04-2016 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 CLI_RS17055 708e66a2ce2e9b825f7dfca9d5ef6a40 124 TIGRFAM TIGR00320 dfx_rbo: desulfoferrodoxin 2 123 5.3E-60 T 23-04-2016 IPR004793 Desulfoferrodoxin GO:0005506|GO:0019430 CLI_RS17055 708e66a2ce2e9b825f7dfca9d5ef6a40 124 SUPERFAMILY SSF57802 3 37 4.08E-12 T 23-04-2016 CLI_RS12200 36d3daa6492a7955c92d0226e3e7cd41 242 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 24 219 1.2E-62 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLI_RS12200 36d3daa6492a7955c92d0226e3e7cd41 242 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 3 232 3.0E-96 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLI_RS12200 36d3daa6492a7955c92d0226e3e7cd41 242 Gene3D G3DSA:1.10.1270.20 160 241 1.9E-34 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLI_RS12200 36d3daa6492a7955c92d0226e3e7cd41 242 PANTHER PTHR32125:SF1 1 226 6.2E-115 T 23-04-2016 CLI_RS12200 36d3daa6492a7955c92d0226e3e7cd41 242 PIRSF PIRSF000386 3 242 1.8E-101 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLI_RS12200 36d3daa6492a7955c92d0226e3e7cd41 242 SUPERFAMILY SSF75217 2 240 5.98E-98 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CLI_RS12200 36d3daa6492a7955c92d0226e3e7cd41 242 Gene3D G3DSA:3.40.1280.10 2 158 1.8E-65 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLI_RS12200 36d3daa6492a7955c92d0226e3e7cd41 242 PANTHER PTHR32125 1 226 6.2E-115 T 23-04-2016 CLI_RS12200 36d3daa6492a7955c92d0226e3e7cd41 242 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 242 103.409 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLI_RS10100 9492675214e1e65d5dcf99e0d8b3091e 131 Gene3D G3DSA:3.30.1330.40 6 131 3.7E-28 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLI_RS10100 9492675214e1e65d5dcf99e0d8b3091e 131 PANTHER PTHR11803 1 130 1.1E-19 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family CLI_RS10100 9492675214e1e65d5dcf99e0d8b3091e 131 Pfam PF01042 Endoribonuclease L-PSP 16 130 6.6E-15 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family CLI_RS10100 9492675214e1e65d5dcf99e0d8b3091e 131 SUPERFAMILY SSF55298 7 131 8.92E-22 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLI_RS08335 b42f6fa5c2ea8cd67c0ae813caced4a4 139 Gene3D G3DSA:3.90.226.10 126 135 1.6E-4 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS08335 b42f6fa5c2ea8cd67c0ae813caced4a4 139 Gene3D G3DSA:3.90.226.10 32 82 1.6E-4 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS13235 46b345adc596120914e8a09eb7c45c46 219 Pfam PF07238 PilZ domain 94 210 3.6E-16 T 23-04-2016 IPR009875 PilZ domain GO:0035438 CLI_RS13235 46b345adc596120914e8a09eb7c45c46 219 SUPERFAMILY SSF141371 131 214 1.24E-8 T 23-04-2016 CLI_RS13235 46b345adc596120914e8a09eb7c45c46 219 Pfam PF12945 Flagellar protein YcgR 8 87 5.5E-19 T 23-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CLI_RS13235 46b345adc596120914e8a09eb7c45c46 219 Gene3D G3DSA:2.40.10.220 95 216 1.9E-14 T 23-04-2016 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 PANTHER PTHR30477:SF1 1 293 4.4E-91 T 23-04-2016 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 Gene3D G3DSA:3.40.50.1980 198 312 4.8E-33 T 23-04-2016 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 Gene3D G3DSA:3.40.50.1980 20 197 9.9E-60 T 23-04-2016 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 Pfam PF01297 Zinc-uptake complex component A periplasmic 37 309 4.8E-73 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 SUPERFAMILY SSF53807 15 312 3.09E-85 T 23-04-2016 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 PRINTS PR00690 Adhesin family signature 65 78 3.9E-14 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 PRINTS PR00690 Adhesin family signature 34 52 3.9E-14 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 PRINTS PR00690 Adhesin family signature 78 95 3.9E-14 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 PRINTS PR00690 Adhesin family signature 202 223 3.9E-14 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 PRINTS PR00690 Adhesin family signature 255 273 3.9E-14 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 PANTHER PTHR30477 1 293 4.4E-91 T 23-04-2016 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 PRINTS PR00691 Adhesin B signature 290 308 2.2E-12 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 PRINTS PR00691 Adhesin B signature 78 97 2.2E-12 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 PRINTS PR00691 Adhesin B signature 59 77 2.2E-12 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CLI_RS07110 3ef70ce420a4fe55a9ce9021445e1e03 312 PRINTS PR00691 Adhesin B signature 34 55 2.2E-12 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CLI_RS01535 91a6895b6799f043b3bcca8e150b04fa 188 SUPERFAMILY SSF52833 50 186 2.23E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS01535 91a6895b6799f043b3bcca8e150b04fa 188 PANTHER PTHR10681:SF125 6 174 3.6E-52 T 23-04-2016 CLI_RS01535 91a6895b6799f043b3bcca8e150b04fa 188 Pfam PF00578 AhpC/TSA family 49 168 1.6E-25 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 CLI_RS01535 91a6895b6799f043b3bcca8e150b04fa 188 PANTHER PTHR10681 6 174 3.6E-52 T 23-04-2016 CLI_RS01535 91a6895b6799f043b3bcca8e150b04fa 188 Gene3D G3DSA:3.40.30.10 10 188 4.2E-45 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS16500 c5c897030e6aff0e98eb838296975cf0 252 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 4 247 1.7E-75 T 23-04-2016 IPR008275 CoA enzyme activase CLI_RS16500 c5c897030e6aff0e98eb838296975cf0 252 Gene3D G3DSA:3.30.420.40 94 230 2.5E-47 T 23-04-2016 CLI_RS16500 c5c897030e6aff0e98eb838296975cf0 252 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 247 1.7E-54 T 23-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS16500 c5c897030e6aff0e98eb838296975cf0 252 PANTHER PTHR32329 1 252 4.0E-125 T 23-04-2016 CLI_RS16500 c5c897030e6aff0e98eb838296975cf0 252 SUPERFAMILY SSF53067 2 247 5.18E-42 T 23-04-2016 CLI_RS02520 8734dd87a8a2cdb9ce3d31812776a13b 380 Gene3D G3DSA:3.40.50.2300 311 360 7.3E-56 T 23-04-2016 CLI_RS02520 8734dd87a8a2cdb9ce3d31812776a13b 380 Gene3D G3DSA:3.40.50.2300 33 159 7.3E-56 T 23-04-2016 CLI_RS02520 8734dd87a8a2cdb9ce3d31812776a13b 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 59 75 9.0E-13 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CLI_RS02520 8734dd87a8a2cdb9ce3d31812776a13b 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 265 283 9.0E-13 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CLI_RS02520 8734dd87a8a2cdb9ce3d31812776a13b 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 37 53 9.0E-13 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CLI_RS02520 8734dd87a8a2cdb9ce3d31812776a13b 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 78 96 9.0E-13 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CLI_RS02520 8734dd87a8a2cdb9ce3d31812776a13b 380 Pfam PF13458 Periplasmic binding protein 36 357 5.6E-76 T 23-04-2016 IPR028081 Leucine-binding protein domain CLI_RS02520 8734dd87a8a2cdb9ce3d31812776a13b 380 PANTHER PTHR30483:SF6 5 378 2.5E-123 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CLI_RS02520 8734dd87a8a2cdb9ce3d31812776a13b 380 PANTHER PTHR30483 5 378 2.5E-123 T 23-04-2016 CLI_RS02520 8734dd87a8a2cdb9ce3d31812776a13b 380 SUPERFAMILY SSF53822 35 377 1.18E-94 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CLI_RS02520 8734dd87a8a2cdb9ce3d31812776a13b 380 Gene3D G3DSA:3.40.50.2300 160 310 2.1E-44 T 23-04-2016 CLI_RS14075 47ca5f96be591d5fcce390ffebaef258 155 Gene3D G3DSA:1.10.10.10 8 86 4.2E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14075 47ca5f96be591d5fcce390ffebaef258 155 PANTHER PTHR33202 8 150 7.2E-32 T 23-04-2016 CLI_RS14075 47ca5f96be591d5fcce390ffebaef258 155 Pfam PF01475 Ferric uptake regulator family 15 143 7.0E-26 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CLI_RS14075 47ca5f96be591d5fcce390ffebaef258 155 SUPERFAMILY SSF46785 10 147 2.13E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10810 4220ee361e4757226f9a59ebf9525e3c 57 Pfam PF00557 Metallopeptidase family M24 2 50 2.8E-6 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS10810 4220ee361e4757226f9a59ebf9525e3c 57 PANTHER PTHR10804:SF86 1 56 4.0E-14 T 23-04-2016 CLI_RS10810 4220ee361e4757226f9a59ebf9525e3c 57 Gene3D G3DSA:3.90.230.10 2 52 4.0E-9 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS10810 4220ee361e4757226f9a59ebf9525e3c 57 SUPERFAMILY SSF55920 1 53 7.07E-10 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS10810 4220ee361e4757226f9a59ebf9525e3c 57 PANTHER PTHR10804 1 56 4.0E-14 T 23-04-2016 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 SUPERFAMILY SSF55307 204 319 1.56E-45 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal CLI_RS12690 7603851df8219cac2666336f0c71977b 369 PANTHER PTHR30314:SF3 4 369 6.5E-208 T 23-04-2016 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 Gene3D G3DSA:3.30.1330.20 215 319 2.9E-49 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CLI_RS12690 7603851df8219cac2666336f0c71977b 369 PANTHER PTHR30314 4 369 6.5E-208 T 23-04-2016 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 PRINTS PR00423 Cell division protein FtsZ signature 98 118 8.2E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 PRINTS PR00423 Cell division protein FtsZ signature 212 233 8.2E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 PRINTS PR00423 Cell division protein FtsZ signature 126 147 8.2E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 PRINTS PR00423 Cell division protein FtsZ signature 189 211 8.2E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 Gene3D G3DSA:3.40.50.1440 13 214 7.1E-96 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.7E-37 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal CLI_RS12690 7603851df8219cac2666336f0c71977b 369 SUPERFAMILY SSF52490 12 208 1.03E-71 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 173 3.6E-43 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 SMART SM00864 13 205 4.0E-116 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 SMART SM00865 207 324 2.0E-59 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CLI_RS12690 7603851df8219cac2666336f0c71977b 369 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 359 39.298 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CLI_RS12690 7603851df8219cac2666336f0c71977b 369 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 332 1.1E-137 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 CLI_RS02000 6791430d8c632f2519a71b80be43b9ac 446 PIRSF PIRSF006603 2 446 2.3E-73 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS02000 6791430d8c632f2519a71b80be43b9ac 446 PANTHER PTHR11206:SF95 4 445 3.6E-87 T 23-04-2016 CLI_RS02000 6791430d8c632f2519a71b80be43b9ac 446 PANTHER PTHR11206 4 445 3.6E-87 T 23-04-2016 CLI_RS02000 6791430d8c632f2519a71b80be43b9ac 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 408 2.5E-65 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS02000 6791430d8c632f2519a71b80be43b9ac 446 Pfam PF01554 MatE 243 405 1.3E-28 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS02000 6791430d8c632f2519a71b80be43b9ac 446 Pfam PF01554 MatE 16 179 3.2E-26 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS10070 fc1ac26f125c0809a2da6e8afa7de73d 146 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 132 5.0E-42 T 23-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS10070 fc1ac26f125c0809a2da6e8afa7de73d 146 SUPERFAMILY SSF55804 1 146 4.58E-44 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 CLI_RS10070 fc1ac26f125c0809a2da6e8afa7de73d 146 PANTHER PTHR30505 1 146 2.4E-52 T 23-04-2016 CLI_RS10070 fc1ac26f125c0809a2da6e8afa7de73d 146 Gene3D G3DSA:3.40.930.10 1 146 4.1E-51 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS10070 fc1ac26f125c0809a2da6e8afa7de73d 146 PANTHER PTHR30505:SF5 1 146 2.4E-52 T 23-04-2016 CLI_RS10070 fc1ac26f125c0809a2da6e8afa7de73d 146 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS10070 fc1ac26f125c0809a2da6e8afa7de73d 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 6.2E-42 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS06715 89869bfe5d3cf897731ce1e03520198e 281 SUPERFAMILY SSF55073 134 275 1.49E-19 T 23-04-2016 IPR029787 Nucleotide cyclase CLI_RS06715 89869bfe5d3cf897731ce1e03520198e 281 SMART SM00267 117 279 8.1E-8 T 23-04-2016 IPR000160 GGDEF domain CLI_RS06715 89869bfe5d3cf897731ce1e03520198e 281 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 268 4.5E-22 T 23-04-2016 IPR000160 GGDEF domain CLI_RS06715 89869bfe5d3cf897731ce1e03520198e 281 Gene3D G3DSA:3.30.70.270 130 276 5.7E-22 T 23-04-2016 CLI_RS06715 89869bfe5d3cf897731ce1e03520198e 281 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 129 277 2.3E-19 T 23-04-2016 IPR000160 GGDEF domain CLI_RS16215 2261242ab9ec78eeb4666192af1320b8 242 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 164 230 2.4E-7 T 23-04-2016 IPR001357 BRCT domain CLI_RS16215 2261242ab9ec78eeb4666192af1320b8 242 Gene3D G3DSA:3.40.50.10190 163 233 2.1E-12 T 23-04-2016 IPR001357 BRCT domain CLI_RS16215 2261242ab9ec78eeb4666192af1320b8 242 SMART SM00292 158 234 0.0015 T 23-04-2016 IPR001357 BRCT domain CLI_RS16215 2261242ab9ec78eeb4666192af1320b8 242 Gene3D G3DSA:1.10.150.20 74 135 2.3E-6 T 23-04-2016 CLI_RS16215 2261242ab9ec78eeb4666192af1320b8 242 SUPERFAMILY SSF52113 162 232 3.55E-10 T 23-04-2016 IPR001357 BRCT domain CLI_RS16215 2261242ab9ec78eeb4666192af1320b8 242 SUPERFAMILY SSF47781 6 136 2.89E-21 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CLI_RS16215 2261242ab9ec78eeb4666192af1320b8 242 Gene3D G3DSA:1.10.150.20 7 72 1.6E-12 T 23-04-2016 CLI_RS02915 9df39545086c02499e34a8b0f2c95446 312 SMART SM00244 18 176 6.9E-52 T 23-04-2016 IPR001107 Band 7 domain CLI_RS02915 9df39545086c02499e34a8b0f2c95446 312 PRINTS PR00721 Stomatin signature 171 192 9.4E-27 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CLI_RS02915 9df39545086c02499e34a8b0f2c95446 312 PRINTS PR00721 Stomatin signature 73 94 9.4E-27 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CLI_RS02915 9df39545086c02499e34a8b0f2c95446 312 PRINTS PR00721 Stomatin signature 108 125 9.4E-27 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CLI_RS02915 9df39545086c02499e34a8b0f2c95446 312 PRINTS PR00721 Stomatin signature 128 151 9.4E-27 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CLI_RS02915 9df39545086c02499e34a8b0f2c95446 312 PRINTS PR00721 Stomatin signature 152 170 9.4E-27 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CLI_RS02915 9df39545086c02499e34a8b0f2c95446 312 SUPERFAMILY SSF117892 49 183 1.11E-40 T 23-04-2016 IPR001107 Band 7 domain CLI_RS02915 9df39545086c02499e34a8b0f2c95446 312 PANTHER PTHR10264 1 303 1.1E-108 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CLI_RS02915 9df39545086c02499e34a8b0f2c95446 312 PANTHER PTHR10264:SF27 1 303 1.1E-108 T 23-04-2016 CLI_RS02915 9df39545086c02499e34a8b0f2c95446 312 Pfam PF01145 SPFH domain / Band 7 family 22 193 8.6E-38 T 23-04-2016 IPR001107 Band 7 domain CLI_RS15980 d71a2ec6c8f6c156586e28cb46425c98 397 Pfam PF04860 Phage portal protein 39 359 3.5E-67 T 23-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein CLI_RS15980 d71a2ec6c8f6c156586e28cb46425c98 397 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 32 366 4.4E-66 T 23-04-2016 IPR006427 Phage portal protein, HK97 CLI_RS03675 81c9c14e7fdcf2bfa3f0c73629a6dff3 484 Gene3D G3DSA:3.40.640.10 85 293 9.0E-32 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS03675 81c9c14e7fdcf2bfa3f0c73629a6dff3 484 Pfam PF02347 Glycine cleavage system P-protein 33 299 7.4E-13 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 CLI_RS03675 81c9c14e7fdcf2bfa3f0c73629a6dff3 484 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 6 484 58.844 T 23-04-2016 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 CLI_RS03675 81c9c14e7fdcf2bfa3f0c73629a6dff3 484 SUPERFAMILY SSF53383 25 483 2.9E-108 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS03675 81c9c14e7fdcf2bfa3f0c73629a6dff3 484 PANTHER PTHR11773 1 484 1.5E-291 T 23-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 CLI_RS10815 83f193678ba5ec1e04ff5fde20a9ebb6 463 PANTHER PTHR11654 1 462 1.1E-158 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS10815 83f193678ba5ec1e04ff5fde20a9ebb6 463 PANTHER PTHR11654:SF119 1 462 1.1E-158 T 23-04-2016 CLI_RS10815 83f193678ba5ec1e04ff5fde20a9ebb6 463 SUPERFAMILY SSF103473 8 450 6.93E-38 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS10815 83f193678ba5ec1e04ff5fde20a9ebb6 463 Pfam PF00854 POT family 241 424 6.3E-31 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS10815 83f193678ba5ec1e04ff5fde20a9ebb6 463 Pfam PF00854 POT family 86 212 4.2E-14 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS10815 83f193678ba5ec1e04ff5fde20a9ebb6 463 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 147 159 - T 23-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS10815 83f193678ba5ec1e04ff5fde20a9ebb6 463 Gene3D G3DSA:1.20.1250.20 245 449 9.8E-9 T 23-04-2016 CLI_RS10815 83f193678ba5ec1e04ff5fde20a9ebb6 463 Gene3D G3DSA:1.20.1250.20 12 215 5.2E-23 T 23-04-2016 CLI_RS10815 83f193678ba5ec1e04ff5fde20a9ebb6 463 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 238 456 1.8E-44 T 23-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CLI_RS05165 0f39c3aacabeee3ce7878348877a590a 107 Pfam PF04993 TfoX N-terminal domain 13 68 3.7E-11 T 23-04-2016 IPR007076 TfoX, N-terminal CLI_RS05165 0f39c3aacabeee3ce7878348877a590a 107 Gene3D G3DSA:3.30.1460.30 6 90 1.4E-16 T 23-04-2016 IPR007076 TfoX, N-terminal CLI_RS05165 0f39c3aacabeee3ce7878348877a590a 107 SUPERFAMILY SSF159894 6 97 9.68E-23 T 23-04-2016 CLI_RS05915 f7815bbcc7e01ba1b48ad01f6f409f4a 208 SMART SM00345 12 71 1.0E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS05915 f7815bbcc7e01ba1b48ad01f6f409f4a 208 Gene3D G3DSA:3.30.70.1450 134 205 2.1E-19 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS05915 f7815bbcc7e01ba1b48ad01f6f409f4a 208 SUPERFAMILY SSF46785 6 82 4.57E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05915 f7815bbcc7e01ba1b48ad01f6f409f4a 208 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 2.1E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS05915 f7815bbcc7e01ba1b48ad01f6f409f4a 208 SUPERFAMILY SSF116726 134 203 6.41E-17 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS05915 f7815bbcc7e01ba1b48ad01f6f409f4a 208 Pfam PF02080 TrkA-C domain 135 203 6.0E-15 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS05915 f7815bbcc7e01ba1b48ad01f6f409f4a 208 PANTHER PTHR16254 49 203 5.6E-64 T 23-04-2016 CLI_RS05915 f7815bbcc7e01ba1b48ad01f6f409f4a 208 PANTHER PTHR16254:SF21 49 203 5.6E-64 T 23-04-2016 CLI_RS05915 f7815bbcc7e01ba1b48ad01f6f409f4a 208 Gene3D G3DSA:1.10.10.10 5 76 1.1E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 359 570 6.1E-28 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 SMART SM00304 211 266 0.0049 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 SUPERFAMILY SSF58104 241 268 7.67E-54 T 23-04-2016 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 SUPERFAMILY SSF58104 301 571 7.67E-54 T 23-04-2016 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 420 3.1E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 3.1E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 3.1E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 316 345 3.1E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 PANTHER PTHR32089:SF42 1 572 1.1E-283 T 23-04-2016 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 SMART SM00283 281 571 2.2E-32 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 Gene3D G3DSA:1.10.287.950 328 527 5.3E-40 T 23-04-2016 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 Gene3D G3DSA:1.10.287.950 245 327 1.2E-10 T 23-04-2016 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 Pfam PF00672 HAMP domain 193 261 2.2E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 PANTHER PTHR32089 1 572 1.1E-283 T 23-04-2016 CLI_RS07065 387e6adf45790a414b9d931c59360f7e 572 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 181 1.8E-31 T 23-04-2016 IPR024478 4HB MCP domain CLI_RS15620 ff6aede8a99a00f382b5462bfe310e4f 447 SUPERFAMILY SSF81324 230 305 4.71E-5 T 23-04-2016 CLI_RS15620 ff6aede8a99a00f382b5462bfe310e4f 447 PANTHER PTHR32024:SF1 2 447 5.9E-216 T 23-04-2016 CLI_RS15620 ff6aede8a99a00f382b5462bfe310e4f 447 PANTHER PTHR32024 2 447 5.9E-216 T 23-04-2016 CLI_RS15620 ff6aede8a99a00f382b5462bfe310e4f 447 Pfam PF02386 Cation transport protein 39 434 2.5E-60 T 23-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CLI_RS15620 ff6aede8a99a00f382b5462bfe310e4f 447 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 30 418 3.9E-110 T 23-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CLI_RS03450 7bf509be6842e38fc3c84695265f358a 352 SUPERFAMILY SSF75011 55 205 6.54E-20 T 23-04-2016 CLI_RS03450 7bf509be6842e38fc3c84695265f358a 352 SUPERFAMILY SSF75011 248 334 6.54E-20 T 23-04-2016 CLI_RS03450 7bf509be6842e38fc3c84695265f358a 352 Pfam PF10282 Lactonase, 7-bladed beta-propeller 15 117 7.6E-9 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 CLI_RS03450 7bf509be6842e38fc3c84695265f358a 352 Pfam PF10282 Lactonase, 7-bladed beta-propeller 254 334 5.9E-5 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 CLI_RS03450 7bf509be6842e38fc3c84695265f358a 352 Gene3D G3DSA:2.130.10.10 16 338 4.9E-34 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CLI_RS01045 1a02846e10b899f9233b48cf2cf29242 197 Pfam PF12822 Protein of unknown function (DUF3816) 7 186 1.5E-30 T 23-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 CLI_RS01045 1a02846e10b899f9233b48cf2cf29242 197 PIRSF PIRSF037778 2 197 4.8E-52 T 23-04-2016 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 CLI_RS01045 1a02846e10b899f9233b48cf2cf29242 197 PANTHER PTHR38438 2 197 3.4E-68 T 23-04-2016 CLI_RS01045 1a02846e10b899f9233b48cf2cf29242 197 PANTHER PTHR38438:SF1 2 197 3.4E-68 T 23-04-2016 CLI_RS10005 a2ac8fa0c8bb55d9597bc3318b153aa5 363 PANTHER PTHR34975:SF2 1 363 1.5E-147 T 23-04-2016 CLI_RS10005 a2ac8fa0c8bb55d9597bc3318b153aa5 363 Pfam PF03845 Spore germination protein 9 321 3.2E-65 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS10005 a2ac8fa0c8bb55d9597bc3318b153aa5 363 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 358 6.1E-70 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS10005 a2ac8fa0c8bb55d9597bc3318b153aa5 363 PANTHER PTHR34975 1 363 1.5E-147 T 23-04-2016 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 562 1.2E-26 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 Pfam PF17202 Single cache domain 3 74 176 2.7E-36 T 23-04-2016 IPR033463 Single cache domain 3 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 Gene3D G3DSA:3.30.450.20 111 179 2.7E-5 T 23-04-2016 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 Gene3D G3DSA:1.10.287.950 252 313 3.8E-4 T 23-04-2016 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 Gene3D G3DSA:1.10.287.950 314 536 2.7E-41 T 23-04-2016 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 PANTHER PTHR32089:SF42 8 564 2.4E-241 T 23-04-2016 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 SUPERFAMILY SSF103190 61 179 2.88E-18 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 PANTHER PTHR32089 8 564 2.4E-241 T 23-04-2016 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 SMART SM00283 280 563 1.6E-24 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 2.8E-5 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 2.8E-5 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 Pfam PF00672 HAMP domain 184 253 3.1E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 SUPERFAMILY SSF58104 233 260 2.01E-52 T 23-04-2016 CLI_RS13945 20050f89af09c810b071b09d1d01f328 564 SUPERFAMILY SSF58104 293 563 2.01E-52 T 23-04-2016 CLI_RS15515 da0027be5c8d90c45d3cbc652a682e4f 298 Pfam PF00483 Nucleotidyl transferase 5 266 1.1E-33 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CLI_RS15515 da0027be5c8d90c45d3cbc652a682e4f 298 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 263 1.8E-125 T 23-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CLI_RS15515 da0027be5c8d90c45d3cbc652a682e4f 298 Gene3D G3DSA:3.90.550.10 4 274 7.5E-74 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS15515 da0027be5c8d90c45d3cbc652a682e4f 298 PANTHER PTHR22572:SF14 5 273 6.9E-112 T 23-04-2016 CLI_RS15515 da0027be5c8d90c45d3cbc652a682e4f 298 PANTHER PTHR22572 5 273 6.9E-112 T 23-04-2016 CLI_RS15515 da0027be5c8d90c45d3cbc652a682e4f 298 SUPERFAMILY SSF53448 1 276 6.05E-69 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS02125 5ce419b67c0419fd18b3e82a406e09b4 329 Pfam PF01757 Acyltransferase family 1 313 2.4E-28 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 CLI_RS02125 5ce419b67c0419fd18b3e82a406e09b4 329 PANTHER PTHR40074:SF2 1 327 1.8E-153 T 23-04-2016 CLI_RS02125 5ce419b67c0419fd18b3e82a406e09b4 329 PANTHER PTHR40074 1 327 1.8E-153 T 23-04-2016 CLI_RS13285 bf2040bdba44163cdbcb298dc91968e5 270 PANTHER PTHR30433:SF2 5 270 2.4E-144 T 23-04-2016 IPR022522 Flagellar motor stator, MotA CLI_RS13285 bf2040bdba44163cdbcb298dc91968e5 270 PANTHER PTHR30433 5 270 2.4E-144 T 23-04-2016 CLI_RS13285 bf2040bdba44163cdbcb298dc91968e5 270 Pfam PF01618 MotA/TolQ/ExbB proton channel family 104 218 2.0E-25 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CLI_RS13285 bf2040bdba44163cdbcb298dc91968e5 270 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 188 205 - T 23-04-2016 IPR000540 Flagellar motor protein MotA, conserved site CLI_RS07085 5bad0521b97518d0d27d268be9a2c611 264 SUPERFAMILY SSF52540 14 251 1.7E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07085 5bad0521b97518d0d27d268be9a2c611 264 PANTHER PTHR24220 5 254 6.3E-101 T 23-04-2016 CLI_RS07085 5bad0521b97518d0d27d268be9a2c611 264 Gene3D G3DSA:3.40.50.300 3 253 8.3E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07085 5bad0521b97518d0d27d268be9a2c611 264 Pfam PF00005 ABC transporter 23 179 1.3E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS07085 5bad0521b97518d0d27d268be9a2c611 264 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07085 5bad0521b97518d0d27d268be9a2c611 264 PANTHER PTHR24220:SF535 5 254 6.3E-101 T 23-04-2016 CLI_RS07085 5bad0521b97518d0d27d268be9a2c611 264 SMART SM00382 30 229 1.2E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06780 1a748a3474af11ba41b613354f77c98e 118 Gene3D G3DSA:3.30.420.130 1 104 1.4E-31 T 23-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLI_RS06780 1a748a3474af11ba41b613354f77c98e 118 PANTHER PTHR33937 1 118 5.9E-48 T 23-04-2016 CLI_RS06780 1a748a3474af11ba41b613354f77c98e 118 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 9 98 3.9E-23 T 23-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLI_RS06780 1a748a3474af11ba41b613354f77c98e 118 PANTHER PTHR33937:SF3 1 118 5.9E-48 T 23-04-2016 CLI_RS06780 1a748a3474af11ba41b613354f77c98e 118 SUPERFAMILY SSF53146 1 118 1.83E-32 T 23-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLI_RS18685 dcb3756f4a92319711943278f05979ea 61 PANTHER PTHR39341 2 60 2.6E-23 T 23-04-2016 CLI_RS18685 dcb3756f4a92319711943278f05979ea 61 Pfam PF08984 Domain of unknown function (DUF1858) 3 56 1.5E-24 T 23-04-2016 IPR015077 Domain of unknown function DUF1858 CLI_RS18685 dcb3756f4a92319711943278f05979ea 61 TIGRFAM TIGR03980 prismane_assoc: hybrid cluster protein-associated redox disulfide domain 3 60 7.8E-30 T 23-04-2016 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide CLI_RS18685 dcb3756f4a92319711943278f05979ea 61 SUPERFAMILY SSF140683 1 61 2.22E-20 T 23-04-2016 CLI_RS01530 83b9082663b4274fdbbb96e3c635bed3 227 PANTHER PTHR31272:SF4 1 227 4.0E-84 T 23-04-2016 CLI_RS01530 83b9082663b4274fdbbb96e3c635bed3 227 PANTHER PTHR31272 1 227 4.0E-84 T 23-04-2016 CLI_RS01530 83b9082663b4274fdbbb96e3c635bed3 227 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 7 215 4.4E-57 T 23-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CLI_RS05605 115fe5ab2b000577a815ed801e6307d7 292 Gene3D G3DSA:3.20.20.70 3 288 1.9E-38 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS05605 115fe5ab2b000577a815ed801e6307d7 292 SUPERFAMILY SSF102114 7 287 1.44E-37 T 23-04-2016 CLI_RS05605 115fe5ab2b000577a815ed801e6307d7 292 Pfam PF13186 Iron-sulfur cluster-binding domain 219 284 2.6E-11 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CLI_RS05605 115fe5ab2b000577a815ed801e6307d7 292 PANTHER PTHR11228:SF28 7 287 3.5E-202 T 23-04-2016 CLI_RS05605 115fe5ab2b000577a815ed801e6307d7 292 Pfam PF04055 Radical SAM superfamily 9 114 2.3E-12 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS05605 115fe5ab2b000577a815ed801e6307d7 292 PANTHER PTHR11228 7 287 3.5E-202 T 23-04-2016 CLI_RS01225 1af5b9b58d9f7b176a080aa06ab83ba4 327 SUPERFAMILY SSF53474 39 325 3.13E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS01225 1af5b9b58d9f7b176a080aa06ab83ba4 327 Pfam PF09752 Uncharacterized conserved protein (DUF2048) 262 321 9.0E-5 T 23-04-2016 IPR019149 Abhydrolase domain containing 18 CLI_RS01225 1af5b9b58d9f7b176a080aa06ab83ba4 327 PANTHER PTHR12277 250 324 5.0E-39 T 23-04-2016 CLI_RS01225 1af5b9b58d9f7b176a080aa06ab83ba4 327 PANTHER PTHR12277 76 217 5.0E-39 T 23-04-2016 CLI_RS01225 1af5b9b58d9f7b176a080aa06ab83ba4 327 Gene3D G3DSA:3.40.50.1820 73 323 6.3E-47 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS01225 1af5b9b58d9f7b176a080aa06ab83ba4 327 Pfam PF12146 Serine aminopeptidase, S33 98 189 2.2E-7 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 CLI_RS09105 d363b7bd0fc0043f47bec7106a24d15c 193 PANTHER PTHR34298:SF2 6 184 2.0E-54 T 23-04-2016 CLI_RS09105 d363b7bd0fc0043f47bec7106a24d15c 193 Pfam PF04079 Segregation and condensation complex subunit ScpB 23 181 2.6E-56 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CLI_RS09105 d363b7bd0fc0043f47bec7106a24d15c 193 SUPERFAMILY SSF46785 18 94 4.08E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09105 d363b7bd0fc0043f47bec7106a24d15c 193 SUPERFAMILY SSF46785 99 172 3.71E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09105 d363b7bd0fc0043f47bec7106a24d15c 193 Gene3D G3DSA:1.10.10.10 17 94 4.3E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09105 d363b7bd0fc0043f47bec7106a24d15c 193 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 20 188 1.3E-46 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CLI_RS09105 d363b7bd0fc0043f47bec7106a24d15c 193 PANTHER PTHR34298 6 184 2.0E-54 T 23-04-2016 CLI_RS09105 d363b7bd0fc0043f47bec7106a24d15c 193 Hamap MF_01804 Segregation and condensation protein B [scpB]. 11 193 31.019 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CLI_RS09105 d363b7bd0fc0043f47bec7106a24d15c 193 PIRSF PIRSF019345 4 193 9.5E-54 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CLI_RS09105 d363b7bd0fc0043f47bec7106a24d15c 193 Gene3D G3DSA:1.10.10.10 99 172 3.5E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17160 357891691925abe33b603dba2a2e8136 301 SUPERFAMILY SSF52540 3 219 6.92E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17160 357891691925abe33b603dba2a2e8136 301 Gene3D G3DSA:3.40.50.300 3 222 4.1E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17160 357891691925abe33b603dba2a2e8136 301 SMART SM00382 28 214 4.8E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS17160 357891691925abe33b603dba2a2e8136 301 PANTHER PTHR24220 5 299 1.4E-100 T 23-04-2016 CLI_RS17160 357891691925abe33b603dba2a2e8136 301 Gene3D G3DSA:3.80.10.10 224 271 9.9E-4 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS17160 357891691925abe33b603dba2a2e8136 301 Pfam PF00005 ABC transporter 20 160 2.4E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS17160 357891691925abe33b603dba2a2e8136 301 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS17160 357891691925abe33b603dba2a2e8136 301 PANTHER PTHR24220:SF427 5 299 1.4E-100 T 23-04-2016 CLI_RS00715 469aa7d78758062f243872eba655cd74 78 PANTHER PTHR40026:SF1 2 77 6.2E-32 T 23-04-2016 IPR009366 Protein Veg GO:0042710 CLI_RS00715 469aa7d78758062f243872eba655cd74 78 PIRSF PIRSF037257 1 78 3.5E-32 T 23-04-2016 IPR009366 Protein Veg GO:0042710 CLI_RS00715 469aa7d78758062f243872eba655cd74 78 Gene3D G3DSA:2.30.30.100 2 76 1.5E-29 T 23-04-2016 CLI_RS00715 469aa7d78758062f243872eba655cd74 78 PANTHER PTHR40026 2 77 6.2E-32 T 23-04-2016 CLI_RS00715 469aa7d78758062f243872eba655cd74 78 Pfam PF06257 Biofilm formation stimulator VEG 6 74 3.0E-29 T 23-04-2016 IPR009366 Protein Veg GO:0042710 CLI_RS03050 ce7aa19cbef2dcd62d81981d0d644c12 416 Pfam PF00375 Sodium:dicarboxylate symporter family 13 403 7.3E-95 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS03050 ce7aa19cbef2dcd62d81981d0d644c12 416 PANTHER PTHR11958 2 409 5.8E-260 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS03050 ce7aa19cbef2dcd62d81981d0d644c12 416 PANTHER PTHR11958:SF61 2 409 5.8E-260 T 23-04-2016 CLI_RS03050 ce7aa19cbef2dcd62d81981d0d644c12 416 Gene3D G3DSA:1.10.3860.10 2 408 1.2E-76 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS03050 ce7aa19cbef2dcd62d81981d0d644c12 416 SUPERFAMILY SSF118215 11 403 3.14E-83 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS03050 ce7aa19cbef2dcd62d81981d0d644c12 416 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 2.3E-18 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS03050 ce7aa19cbef2dcd62d81981d0d644c12 416 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 2.3E-18 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS03050 ce7aa19cbef2dcd62d81981d0d644c12 416 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 2.3E-18 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS03050 ce7aa19cbef2dcd62d81981d0d644c12 416 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 2.3E-18 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS03050 ce7aa19cbef2dcd62d81981d0d644c12 416 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 2.3E-18 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS03050 ce7aa19cbef2dcd62d81981d0d644c12 416 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 2.3E-18 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS13560 711c5b47506373127fc8829ca018e76d 358 PANTHER PTHR22572:SF114 122 348 2.1E-85 T 23-04-2016 CLI_RS13560 711c5b47506373127fc8829ca018e76d 358 Gene3D G3DSA:3.10.580.10 4 114 4.2E-25 T 23-04-2016 CLI_RS13560 711c5b47506373127fc8829ca018e76d 358 SMART SM00116 6 54 7.5 T 23-04-2016 IPR000644 CBS domain CLI_RS13560 711c5b47506373127fc8829ca018e76d 358 SMART SM00116 70 118 0.001 T 23-04-2016 IPR000644 CBS domain CLI_RS13560 711c5b47506373127fc8829ca018e76d 358 SUPERFAMILY SSF54631 8 114 1.39E-22 T 23-04-2016 CLI_RS13560 711c5b47506373127fc8829ca018e76d 358 Pfam PF00483 Nucleotidyl transferase 124 345 3.0E-41 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CLI_RS13560 711c5b47506373127fc8829ca018e76d 358 Gene3D G3DSA:3.90.550.10 123 348 3.1E-65 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS13560 711c5b47506373127fc8829ca018e76d 358 Pfam PF00571 CBS domain 12 54 1.8E-5 T 23-04-2016 IPR000644 CBS domain CLI_RS13560 711c5b47506373127fc8829ca018e76d 358 Pfam PF00571 CBS domain 64 114 1.1E-8 T 23-04-2016 IPR000644 CBS domain CLI_RS13560 711c5b47506373127fc8829ca018e76d 358 PANTHER PTHR22572 122 348 2.1E-85 T 23-04-2016 CLI_RS13560 711c5b47506373127fc8829ca018e76d 358 SUPERFAMILY SSF53448 122 347 2.29E-68 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS17450 ef1ae1fde657af7c1894692329b7f811 120 PIRSF PIRSF033595 1 117 2.7E-39 T 23-04-2016 IPR017016 Uncharacterised conserved protein UCP033595 CLI_RS15990 1e0d3380d64059075457154cbf565f8a 154 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 40 148 2.8E-26 T 23-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family CLI_RS15990 1e0d3380d64059075457154cbf565f8a 154 Pfam PF05119 Phage terminase, small subunit 50 139 3.9E-18 T 23-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family CLI_RS10540 f2fbeafe1f3d738a9d609fd1a0fd10e2 220 Pfam PF06249 Ethanolamine utilisation protein EutQ 104 217 8.7E-36 T 23-04-2016 IPR010424 Ethanolamine utilisation EutQ UniPathway: UPA00560 CLI_RS10540 f2fbeafe1f3d738a9d609fd1a0fd10e2 220 SUPERFAMILY SSF51182 105 216 9.33E-24 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS10540 f2fbeafe1f3d738a9d609fd1a0fd10e2 220 PANTHER PTHR36169 6 220 1.7E-61 T 23-04-2016 CLI_RS10540 f2fbeafe1f3d738a9d609fd1a0fd10e2 220 Gene3D G3DSA:2.60.120.10 90 218 1.7E-42 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS05910 89e07565a694a769f8ef077e49dc25b3 504 PANTHER PTHR30047 6 503 2.9E-226 T 23-04-2016 CLI_RS05910 89e07565a694a769f8ef077e49dc25b3 504 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 10 487 4.3E-177 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CLI_RS05910 89e07565a694a769f8ef077e49dc25b3 504 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 48 487 1.2E-145 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CLI_RS05910 89e07565a694a769f8ef077e49dc25b3 504 PANTHER PTHR30047:SF2 6 503 2.9E-226 T 23-04-2016 CLI_RS08295 8a7d8f9934a2f11097299dac80575c28 285 PANTHER PTHR10000:SF8 1 285 3.6E-85 T 23-04-2016 CLI_RS08295 8a7d8f9934a2f11097299dac80575c28 285 PANTHER PTHR10000 1 285 3.6E-85 T 23-04-2016 CLI_RS08295 8a7d8f9934a2f11097299dac80575c28 285 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 253 1.8E-25 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 CLI_RS08295 8a7d8f9934a2f11097299dac80575c28 285 SUPERFAMILY SSF56784 2 284 7.46E-66 T 23-04-2016 IPR023214 HAD-like domain CLI_RS08295 8a7d8f9934a2f11097299dac80575c28 285 Gene3D G3DSA:3.30.1240.10 82 199 1.3E-42 T 23-04-2016 CLI_RS08295 8a7d8f9934a2f11097299dac80575c28 285 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 280 4.8E-65 T 23-04-2016 IPR023214 HAD-like domain CLI_RS08295 8a7d8f9934a2f11097299dac80575c28 285 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 280 1.3E-60 T 23-04-2016 IPR000150 Cof protein GO:0016787 CLI_RS08295 8a7d8f9934a2f11097299dac80575c28 285 Gene3D G3DSA:3.40.50.1000 1 71 1.0E-51 T 23-04-2016 IPR023214 HAD-like domain CLI_RS08295 8a7d8f9934a2f11097299dac80575c28 285 Gene3D G3DSA:3.40.50.1000 200 284 1.0E-51 T 23-04-2016 IPR023214 HAD-like domain CLI_RS08295 8a7d8f9934a2f11097299dac80575c28 285 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 23-04-2016 IPR000150 Cof protein GO:0016787 CLI_RS08295 8a7d8f9934a2f11097299dac80575c28 285 ProSitePatterns PS01229 Hypothetical cof family signature 2. 234 256 - T 23-04-2016 CLI_RS13040 2f3b96997ca859d2e0851452f0dbf9a5 311 PANTHER PTHR21535 21 311 5.4E-40 T 23-04-2016 CLI_RS13040 2f3b96997ca859d2e0851452f0dbf9a5 311 Gene3D G3DSA:1.20.58.340 125 230 1.3E-20 T 23-04-2016 CLI_RS13040 2f3b96997ca859d2e0851452f0dbf9a5 311 SUPERFAMILY SSF144083 246 309 1.1E-18 T 23-04-2016 CLI_RS13040 2f3b96997ca859d2e0851452f0dbf9a5 311 Gene3D G3DSA:3.30.460.20 20 115 2.0E-11 T 23-04-2016 CLI_RS13040 2f3b96997ca859d2e0851452f0dbf9a5 311 Gene3D G3DSA:1.20.58.340 236 311 8.0E-27 T 23-04-2016 CLI_RS13040 2f3b96997ca859d2e0851452f0dbf9a5 311 SUPERFAMILY SSF143865 20 245 3.53E-36 T 23-04-2016 CLI_RS13040 2f3b96997ca859d2e0851452f0dbf9a5 311 Pfam PF01544 CorA-like Mg2+ transporter protein 22 307 1.6E-65 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CLI_RS11715 081a7f71ace1f2d4b7ef4025034d018e 364 Pfam PF04865 Baseplate J-like protein 63 320 2.4E-57 T 23-04-2016 IPR006949 Baseplate protein J-like CLI_RS11715 081a7f71ace1f2d4b7ef4025034d018e 364 PANTHER PTHR37829 1 363 1.5E-111 T 23-04-2016 CLI_RS10700 a771d55ebc36defac78eef66bb44abf8 719 SUPERFAMILY SSF55486 481 710 1.14E-14 T 23-04-2016 CLI_RS10700 a771d55ebc36defac78eef66bb44abf8 719 Pfam PF01433 Peptidase family M1 554 629 3.5E-6 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 PANTHER PTHR12725 1 229 3.7E-52 T 23-04-2016 CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 PANTHER PTHR12725:SF57 1 229 3.7E-52 T 23-04-2016 CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 92 201 1.1E-12 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 4.0E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 4.0E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 4.0E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 189 202 4.0E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 227 2.7E-68 T 23-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 200 1.6E-8 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 Gene3D G3DSA:3.40.50.1000 93 228 1.9E-43 T 23-04-2016 IPR023214 HAD-like domain CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 199 3.2E-29 T 23-04-2016 IPR023214 HAD-like domain CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 Gene3D G3DSA:1.10.150.240 16 92 1.8E-19 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 55 194 1.2E-16 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLI_RS05360 50deb48df6c6f93bae87818a65eac4a6 229 SUPERFAMILY SSF56784 2 228 6.57E-48 T 23-04-2016 IPR023214 HAD-like domain CLI_RS01950 428e2856704ca628086f42dfc1e5b0a5 336 Gene3D G3DSA:2.120.10.70 118 335 8.5E-70 T 23-04-2016 CLI_RS01950 428e2856704ca628086f42dfc1e5b0a5 336 SUPERFAMILY SSF89372 70 301 2.55E-56 T 23-04-2016 CLI_RS01950 428e2856704ca628086f42dfc1e5b0a5 336 Pfam PF03984 Repeat of unknown function (DUF346) 231 266 4.4E-9 T 23-04-2016 IPR007132 Protein of unknown function DUF346 CLI_RS01950 428e2856704ca628086f42dfc1e5b0a5 336 Pfam PF03984 Repeat of unknown function (DUF346) 142 175 1.1E-9 T 23-04-2016 IPR007132 Protein of unknown function DUF346 CLI_RS01950 428e2856704ca628086f42dfc1e5b0a5 336 Pfam PF03984 Repeat of unknown function (DUF346) 187 220 6.7E-9 T 23-04-2016 IPR007132 Protein of unknown function DUF346 CLI_RS17670 6170039a2f991603278b3c83f90720b2 246 SUPERFAMILY SSF55120 2 246 1.44E-78 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS17670 6170039a2f991603278b3c83f90720b2 246 Pfam PF01416 tRNA pseudouridine synthase 145 246 4.5E-27 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS17670 6170039a2f991603278b3c83f90720b2 246 Pfam PF01416 tRNA pseudouridine synthase 9 105 2.1E-10 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS17670 6170039a2f991603278b3c83f90720b2 246 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 241 3.0E-61 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS17670 6170039a2f991603278b3c83f90720b2 246 Gene3D G3DSA:3.30.70.660 109 244 2.0E-42 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS17670 6170039a2f991603278b3c83f90720b2 246 PIRSF PIRSF001430 1 246 3.6E-78 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS17670 6170039a2f991603278b3c83f90720b2 246 Gene3D G3DSA:3.30.70.580 2 105 2.0E-33 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS17670 6170039a2f991603278b3c83f90720b2 246 PANTHER PTHR11142:SF0 1 246 7.1E-91 T 23-04-2016 CLI_RS17670 6170039a2f991603278b3c83f90720b2 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 246 34.54 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS17670 6170039a2f991603278b3c83f90720b2 246 PANTHER PTHR11142 1 246 7.1E-91 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS09695 adc3d218f181e39587db585304765695 467 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 51 382 1.2E-71 T 23-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CLI_RS09695 adc3d218f181e39587db585304765695 467 PANTHER PTHR11999 33 450 6.6E-172 T 23-04-2016 CLI_RS09695 adc3d218f181e39587db585304765695 467 Gene3D G3DSA:3.40.640.10 74 310 8.4E-27 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS09695 adc3d218f181e39587db585304765695 467 PANTHER PTHR11999:SF99 33 450 6.6E-172 T 23-04-2016 CLI_RS09695 adc3d218f181e39587db585304765695 467 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 22 447 5.5E-200 T 23-04-2016 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 CLI_RS09695 adc3d218f181e39587db585304765695 467 SUPERFAMILY SSF53383 12 447 4.61E-128 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS04235 71bb2c8b990a1de2561b71437c81a20a 1191 SUPERFAMILY SSF52467 73 171 4.25E-5 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS04235 71bb2c8b990a1de2561b71437c81a20a 1191 Pfam PF13289 SIR2-like domain 120 256 2.4E-23 T 23-04-2016 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 SUPERFAMILY SSF51445 37 500 1.43E-134 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PANTHER PTHR31352 1 496 0.0 T 23-04-2016 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 SMART SM01065 448 541 8.9E-18 T 23-04-2016 IPR002044 Carbohydrate binding module family 20 GO:2001070 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PANTHER PTHR31352:SF10 1 496 0.0 T 23-04-2016 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00841 Bacterial beta-amylase signature 411 432 2.3E-27 T 23-04-2016 IPR000125 Glycoside hydrolase, family 14A, bacterial GO:0005976|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00841 Bacterial beta-amylase signature 244 261 2.3E-27 T 23-04-2016 IPR000125 Glycoside hydrolase, family 14A, bacterial GO:0005976|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00841 Bacterial beta-amylase signature 135 154 2.3E-27 T 23-04-2016 IPR000125 Glycoside hydrolase, family 14A, bacterial GO:0005976|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00841 Bacterial beta-amylase signature 228 243 2.3E-27 T 23-04-2016 IPR000125 Glycoside hydrolase, family 14A, bacterial GO:0005976|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 Gene3D G3DSA:2.60.40.10 448 540 1.7E-20 T 23-04-2016 IPR013783 Immunoglobulin-like fold CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 Gene3D G3DSA:3.20.20.80 35 430 1.2E-120 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 Pfam PF00686 Starch binding domain 449 538 7.5E-16 T 23-04-2016 IPR002044 Carbohydrate binding module family 20 GO:2001070 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 Pfam PF01373 Glycosyl hydrolase family 14 45 440 2.0E-160 T 23-04-2016 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 268 287 8.4E-57 T 23-04-2016 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 69 83 8.4E-57 T 23-04-2016 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 324 335 8.4E-57 T 23-04-2016 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 112 133 8.4E-57 T 23-04-2016 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 373 395 8.4E-57 T 23-04-2016 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 336 359 8.4E-57 T 23-04-2016 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 90 108 8.4E-57 T 23-04-2016 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 194 216 8.4E-57 T 23-04-2016 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS06240 859410861bd117b8d3d2c60d75c7b403 542 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 305 321 8.4E-57 T 23-04-2016 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 CLI_RS14775 fcd48a28ce7e3db8d0b3192612d6b09f 595 PANTHER PTHR30619:SF2 5 565 4.2E-111 T 23-04-2016 CLI_RS14775 fcd48a28ce7e3db8d0b3192612d6b09f 595 Pfam PF03772 Competence protein 173 419 1.5E-43 T 23-04-2016 IPR004477 ComEC/Rec2-related protein CLI_RS14775 fcd48a28ce7e3db8d0b3192612d6b09f 595 PANTHER PTHR30619 5 565 4.2E-111 T 23-04-2016 CLI_RS14775 fcd48a28ce7e3db8d0b3192612d6b09f 595 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 195 356 8.0E-19 T 23-04-2016 IPR004477 ComEC/Rec2-related protein CLI_RS09895 0636ac08beab2884a5095e7b02702b4a 273 Gene3D G3DSA:1.10.1660.10 2 63 9.6E-21 T 23-04-2016 CLI_RS09895 0636ac08beab2884a5095e7b02702b4a 273 Gene3D G3DSA:1.10.1660.10 64 114 9.3E-5 T 23-04-2016 CLI_RS09895 0636ac08beab2884a5095e7b02702b4a 273 Pfam PF13411 MerR HTH family regulatory protein 6 74 1.2E-14 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS09895 0636ac08beab2884a5095e7b02702b4a 273 SMART SM00422 6 75 1.9E-16 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS09895 0636ac08beab2884a5095e7b02702b4a 273 PANTHER PTHR30204 1 271 6.2E-171 T 23-04-2016 CLI_RS09895 0636ac08beab2884a5095e7b02702b4a 273 PANTHER PTHR30204:SF28 1 271 6.2E-171 T 23-04-2016 CLI_RS09895 0636ac08beab2884a5095e7b02702b4a 273 SUPERFAMILY SSF55136 137 265 8.37E-12 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS09895 0636ac08beab2884a5095e7b02702b4a 273 Gene3D G3DSA:3.20.80.10 120 266 7.1E-23 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CLI_RS09895 0636ac08beab2884a5095e7b02702b4a 273 SUPERFAMILY SSF46955 4 108 1.14E-22 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS03260 a64de73ef997e81ee6b3d292f191f773 362 SUPERFAMILY SSF48452 51 113 5.58E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS03260 a64de73ef997e81ee6b3d292f191f773 362 Gene3D G3DSA:1.25.40.10 43 110 2.2E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS03260 a64de73ef997e81ee6b3d292f191f773 362 Pfam PF07532 Bacterial Ig-like domain (group 4) 136 185 2.8E-10 T 23-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 CLI_RS15185 64add5207a928597968a279e23abbe44 67 PANTHER PTHR36107 1 66 1.8E-30 T 23-04-2016 CLI_RS15185 64add5207a928597968a279e23abbe44 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 7 66 3.8E-25 T 23-04-2016 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLI_RS15185 64add5207a928597968a279e23abbe44 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 22 31 - T 23-04-2016 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLI_RS15185 64add5207a928597968a279e23abbe44 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 45 59 - T 23-04-2016 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLI_RS12775 c50e50def3aa9183e1bd83e1b4c18b69 556 PANTHER PTHR30627:SF1 2 552 8.1E-144 T 23-04-2016 CLI_RS12775 c50e50def3aa9183e1bd83e1b4c18b69 556 PANTHER PTHR30627 2 552 8.1E-144 T 23-04-2016 CLI_RS12775 c50e50def3aa9183e1bd83e1b4c18b69 556 Pfam PF00905 Penicillin binding protein transpeptidase domain 255 549 4.2E-46 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLI_RS12775 c50e50def3aa9183e1bd83e1b4c18b69 556 Gene3D G3DSA:3.40.710.10 204 553 2.6E-62 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS12775 c50e50def3aa9183e1bd83e1b4c18b69 556 Gene3D G3DSA:3.40.710.10 100 115 2.6E-62 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS12775 c50e50def3aa9183e1bd83e1b4c18b69 556 SUPERFAMILY SSF56601 194 553 9.63E-65 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS13095 483ea1f0af92e343b8ce951ad6bc388d 324 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 5 314 1.8E-135 T 23-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CLI_RS13095 483ea1f0af92e343b8ce951ad6bc388d 324 PANTHER PTHR30447 1 324 1.4E-173 T 23-04-2016 CLI_RS13095 483ea1f0af92e343b8ce951ad6bc388d 324 PANTHER PTHR30447:SF0 1 324 1.4E-173 T 23-04-2016 CLI_RS13095 483ea1f0af92e343b8ce951ad6bc388d 324 SUPERFAMILY SSF56655 3 316 3.62E-101 T 23-04-2016 CLI_RS13095 483ea1f0af92e343b8ce951ad6bc388d 324 Gene3D G3DSA:3.30.540.10 176 319 1.4E-40 T 23-04-2016 CLI_RS13095 483ea1f0af92e343b8ce951ad6bc388d 324 Gene3D G3DSA:3.30.540.10 3 175 2.0E-58 T 23-04-2016 CLI_RS13095 483ea1f0af92e343b8ce951ad6bc388d 324 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 3 320 5.3E-114 T 23-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CLI_RS13095 483ea1f0af92e343b8ce951ad6bc388d 324 PIRSF PIRSF004532 2 323 1.1E-137 T 23-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CLI_RS02710 1f39ec3ec76637745b66d4d28a854170 420 PANTHER PTHR10283 1 418 2.5E-163 T 23-04-2016 CLI_RS02710 1f39ec3ec76637745b66d4d28a854170 420 Pfam PF03600 Citrate transporter 12 361 7.2E-53 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 CLI_RS02710 1f39ec3ec76637745b66d4d28a854170 420 PANTHER PTHR10283:SF67 1 418 2.5E-163 T 23-04-2016 CLI_RS02710 1f39ec3ec76637745b66d4d28a854170 420 PRINTS PR00758 Arsenical pump membrane protein signature 357 382 5.8E-15 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CLI_RS02710 1f39ec3ec76637745b66d4d28a854170 420 PRINTS PR00758 Arsenical pump membrane protein signature 270 294 5.8E-15 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CLI_RS02710 1f39ec3ec76637745b66d4d28a854170 420 PRINTS PR00758 Arsenical pump membrane protein signature 213 238 5.8E-15 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CLI_RS02710 1f39ec3ec76637745b66d4d28a854170 420 PRINTS PR00758 Arsenical pump membrane protein signature 97 121 5.8E-15 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CLI_RS02710 1f39ec3ec76637745b66d4d28a854170 420 PRINTS PR00758 Arsenical pump membrane protein signature 315 337 5.8E-15 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CLI_RS02710 1f39ec3ec76637745b66d4d28a854170 420 PRINTS PR00758 Arsenical pump membrane protein signature 390 414 5.8E-15 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CLI_RS10595 d21663e214fd5927101aa84c0fe93210 98 SMART SM00877 7 83 3.3E-34 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS10595 d21663e214fd5927101aa84c0fe93210 98 PANTHER PTHR33941:SF2 1 95 1.5E-39 T 23-04-2016 CLI_RS10595 d21663e214fd5927101aa84c0fe93210 98 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 7 53 1.0E-16 T 23-04-2016 CLI_RS10595 d21663e214fd5927101aa84c0fe93210 98 Pfam PF00936 BMC domain 8 83 1.3E-27 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS10595 d21663e214fd5927101aa84c0fe93210 98 PANTHER PTHR33941 1 95 1.5E-39 T 23-04-2016 CLI_RS10595 d21663e214fd5927101aa84c0fe93210 98 SUPERFAMILY SSF143414 7 93 3.66E-27 T 23-04-2016 CLI_RS09645 e88fbd3f94815d9013209f913bffe76a 134 SUPERFAMILY SSF54523 14 121 1.41E-15 T 23-04-2016 CLI_RS09645 e88fbd3f94815d9013209f913bffe76a 134 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 8 31 3.0E-9 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CLI_RS09645 e88fbd3f94815d9013209f913bffe76a 134 PANTHER PTHR30093 1 82 1.9E-19 T 23-04-2016 CLI_RS09645 e88fbd3f94815d9013209f913bffe76a 134 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CLI_RS09645 e88fbd3f94815d9013209f913bffe76a 134 Gene3D G3DSA:3.30.700.10 14 120 3.5E-12 T 23-04-2016 CLI_RS09645 e88fbd3f94815d9013209f913bffe76a 134 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 5.6E-9 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CLI_RS15930 8aec66a9e97a48705f7d2b897840602c 1826 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 226 619 2.9E-45 T 23-04-2016 IPR010090 Phage tail tape measure protein CLI_RS15930 8aec66a9e97a48705f7d2b897840602c 1826 SUPERFAMILY SSF57997 16 205 6.54E-10 T 23-04-2016 CLI_RS15930 8aec66a9e97a48705f7d2b897840602c 1826 Pfam PF10145 Phage-related minor tail protein 258 445 2.4E-17 T 23-04-2016 IPR010090 Phage tail tape measure protein CLI_RS12530 57bf2af8034fd24ef7c1b8a865cb8ad6 249 SMART SM00332 2 237 3.9E-18 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLI_RS12530 57bf2af8034fd24ef7c1b8a865cb8ad6 249 PANTHER PTHR13832 3 236 1.1E-66 T 23-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 CLI_RS12530 57bf2af8034fd24ef7c1b8a865cb8ad6 249 SUPERFAMILY SSF81606 3 236 2.09E-61 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLI_RS12530 57bf2af8034fd24ef7c1b8a865cb8ad6 249 PANTHER PTHR13832:SF278 3 236 1.1E-66 T 23-04-2016 CLI_RS12530 57bf2af8034fd24ef7c1b8a865cb8ad6 249 Gene3D G3DSA:3.60.40.10 3 237 8.8E-67 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLI_RS12530 57bf2af8034fd24ef7c1b8a865cb8ad6 249 Pfam PF13672 Protein phosphatase 2C 13 201 4.1E-16 T 23-04-2016 CLI_RS12530 57bf2af8034fd24ef7c1b8a865cb8ad6 249 SMART SM00331 6 239 1.4E-37 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLI_RS13755 6d797e7bd9437c6fac8a8fa39ab4422f 402 PANTHER PTHR11851 2 396 2.4E-69 T 23-04-2016 CLI_RS13755 6d797e7bd9437c6fac8a8fa39ab4422f 402 SUPERFAMILY SSF63411 2 205 5.33E-48 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLI_RS13755 6d797e7bd9437c6fac8a8fa39ab4422f 402 Gene3D G3DSA:3.30.830.10 2 205 3.6E-43 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CLI_RS13755 6d797e7bd9437c6fac8a8fa39ab4422f 402 Pfam PF00675 Insulinase (Peptidase family M16) 9 151 3.8E-23 T 23-04-2016 IPR011765 Peptidase M16, N-terminal CLI_RS13755 6d797e7bd9437c6fac8a8fa39ab4422f 402 SUPERFAMILY SSF63411 221 398 1.08E-22 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLI_RS13755 6d797e7bd9437c6fac8a8fa39ab4422f 402 Gene3D G3DSA:3.30.830.10 222 399 5.1E-23 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CLI_RS13755 6d797e7bd9437c6fac8a8fa39ab4422f 402 Pfam PF05193 Peptidase M16 inactive domain 161 336 1.1E-29 T 23-04-2016 IPR007863 Peptidase M16, C-terminal CLI_RS17355 92ac59078e121356cff87dff0056fbea 476 SUPERFAMILY SSF56601 142 474 1.32E-91 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS17355 92ac59078e121356cff87dff0056fbea 476 PANTHER PTHR30627:SF3 62 474 9.3E-157 T 23-04-2016 CLI_RS17355 92ac59078e121356cff87dff0056fbea 476 Gene3D G3DSA:3.40.710.10 148 474 9.3E-99 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS17355 92ac59078e121356cff87dff0056fbea 476 ProSitePatterns PS00337 Beta-lactamase class-D active site. 211 221 - T 23-04-2016 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 CLI_RS17355 92ac59078e121356cff87dff0056fbea 476 Gene3D G3DSA:3.90.1310.10 75 147 1.9E-14 T 23-04-2016 CLI_RS17355 92ac59078e121356cff87dff0056fbea 476 Pfam PF00905 Penicillin binding protein transpeptidase domain 159 470 5.7E-69 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLI_RS17355 92ac59078e121356cff87dff0056fbea 476 SUPERFAMILY SSF56519 44 115 5.98E-9 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLI_RS17355 92ac59078e121356cff87dff0056fbea 476 PANTHER PTHR30627 62 474 9.3E-157 T 23-04-2016 CLI_RS05305 296b3069329e7838a4b6850e31a022e7 192 Gene3D G3DSA:3.50.30.50 21 191 4.2E-29 T 23-04-2016 CLI_RS05305 296b3069329e7838a4b6850e31a022e7 192 Pfam PF04199 Putative cyclase 3 130 2.2E-11 T 23-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 CLI_RS05305 296b3069329e7838a4b6850e31a022e7 192 SUPERFAMILY SSF102198 26 191 4.32E-32 T 23-04-2016 CLI_RS10590 70f31edcc490f6744c068dd33d0ecf40 102 SUPERFAMILY SSF143414 4 95 1.14E-31 T 23-04-2016 CLI_RS10590 70f31edcc490f6744c068dd33d0ecf40 102 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 5 63 3.0E-22 T 23-04-2016 CLI_RS10590 70f31edcc490f6744c068dd33d0ecf40 102 Pfam PF00936 BMC domain 6 83 1.6E-26 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS10590 70f31edcc490f6744c068dd33d0ecf40 102 SMART SM00877 5 83 2.0E-34 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS10590 70f31edcc490f6744c068dd33d0ecf40 102 PANTHER PTHR33941 1 93 3.2E-39 T 23-04-2016 CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.8E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.8E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.8E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 Gene3D G3DSA:1.10.10.10 158 215 2.0E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 PANTHER PTHR26402:SF151 4 214 4.7E-82 T 23-04-2016 CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 SMART SM00421 153 210 8.0E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 6.0E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 SMART SM00448 4 117 1.1E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 SUPERFAMILY SSF46894 149 216 1.19E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 Pfam PF00072 Response regulator receiver domain 6 114 2.0E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 SUPERFAMILY SSF52172 3 133 7.12E-33 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 Gene3D G3DSA:3.40.50.2300 2 157 1.4E-36 T 23-04-2016 CLI_RS07185 1d3aed1bb640a905c8136a89bb3e6554 217 PANTHER PTHR26402 4 214 4.7E-82 T 23-04-2016 CLI_RS16305 a9bbf20fc522eeda68acd0dbcbd9736d 365 Gene3D G3DSA:4.10.860.10 178 227 3.6E-7 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS16305 a9bbf20fc522eeda68acd0dbcbd9736d 365 SUPERFAMILY SSF82771 13 95 1.31E-21 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CLI_RS16305 a9bbf20fc522eeda68acd0dbcbd9736d 365 PANTHER PTHR30562 2 332 1.3E-97 T 23-04-2016 CLI_RS16305 a9bbf20fc522eeda68acd0dbcbd9736d 365 PANTHER PTHR30562:SF1 2 332 1.3E-97 T 23-04-2016 CLI_RS16305 a9bbf20fc522eeda68acd0dbcbd9736d 365 SUPERFAMILY SSF46600 186 233 1.96E-5 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS16305 a9bbf20fc522eeda68acd0dbcbd9736d 365 SMART SM00465 13 95 1.4E-18 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CLI_RS16305 a9bbf20fc522eeda68acd0dbcbd9736d 365 Pfam PF02151 UvrB/uvrC motif 199 227 1.7E-4 T 23-04-2016 IPR001943 UVR domain GO:0005515 CLI_RS16305 a9bbf20fc522eeda68acd0dbcbd9736d 365 Pfam PF01541 GIY-YIG catalytic domain 15 90 2.5E-9 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CLI_RS16305 a9bbf20fc522eeda68acd0dbcbd9736d 365 Gene3D G3DSA:3.40.1440.10 14 95 2.6E-9 T 23-04-2016 IPR027299 GIY-YIG domain CLI_RS04550 8204760f2b60ad67f31753e94c287583 295 SUPERFAMILY SSF46785 1 112 2.01E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04550 8204760f2b60ad67f31753e94c287583 295 Pfam PF03466 LysR substrate binding domain 91 294 6.6E-32 T 23-04-2016 IPR005119 LysR, substrate-binding CLI_RS04550 8204760f2b60ad67f31753e94c287583 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.9E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS04550 8204760f2b60ad67f31753e94c287583 295 Gene3D G3DSA:3.40.190.10 90 196 2.4E-15 T 23-04-2016 CLI_RS04550 8204760f2b60ad67f31753e94c287583 295 Gene3D G3DSA:1.10.10.10 3 83 5.0E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04550 8204760f2b60ad67f31753e94c287583 295 PANTHER PTHR30126:SF13 2 295 7.5E-111 T 23-04-2016 CLI_RS04550 8204760f2b60ad67f31753e94c287583 295 SUPERFAMILY SSF53850 92 294 7.67E-32 T 23-04-2016 CLI_RS04550 8204760f2b60ad67f31753e94c287583 295 Gene3D G3DSA:3.40.190.10 197 267 1.5E-12 T 23-04-2016 CLI_RS04550 8204760f2b60ad67f31753e94c287583 295 PANTHER PTHR30126 2 295 7.5E-111 T 23-04-2016 CLI_RS04550 8204760f2b60ad67f31753e94c287583 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.8E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS04550 8204760f2b60ad67f31753e94c287583 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.8E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS04550 8204760f2b60ad67f31753e94c287583 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.8E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS14030 76d7e31a20ef3b2357a9a179062138f7 351 Gene3D G3DSA:3.40.50.620 160 303 9.2E-27 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS14030 76d7e31a20ef3b2357a9a179062138f7 351 PANTHER PTHR30336 44 306 2.0E-134 T 23-04-2016 CLI_RS14030 76d7e31a20ef3b2357a9a179062138f7 351 PANTHER PTHR30336:SF4 44 306 2.0E-134 T 23-04-2016 CLI_RS14030 76d7e31a20ef3b2357a9a179062138f7 351 Pfam PF02698 DUF218 domain 165 316 1.8E-30 T 23-04-2016 IPR003848 Domain of unknown function DUF218 CLI_RS18750 efc7b0ec2a082fa8e56e6ed1bbf20cfc 94 PANTHER PTHR21011 1 91 7.2E-31 T 23-04-2016 CLI_RS18750 efc7b0ec2a082fa8e56e6ed1bbf20cfc 94 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 20.282 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS18750 efc7b0ec2a082fa8e56e6ed1bbf20cfc 94 Gene3D G3DSA:3.30.70.60 1 94 3.6E-37 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CLI_RS18750 efc7b0ec2a082fa8e56e6ed1bbf20cfc 94 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.0E-29 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS18750 efc7b0ec2a082fa8e56e6ed1bbf20cfc 94 SUPERFAMILY SSF54995 1 93 2.75E-35 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS18750 efc7b0ec2a082fa8e56e6ed1bbf20cfc 94 Pfam PF01250 Ribosomal protein S6 3 91 2.1E-32 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLI_RS11115 8e19d435e5f9f70770c164239266598a 118 Gene3D G3DSA:3.30.420.130 1 99 2.5E-30 T 23-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLI_RS11115 8e19d435e5f9f70770c164239266598a 118 PANTHER PTHR33937 1 118 2.1E-45 T 23-04-2016 CLI_RS11115 8e19d435e5f9f70770c164239266598a 118 PANTHER PTHR33937:SF3 1 118 2.1E-45 T 23-04-2016 CLI_RS11115 8e19d435e5f9f70770c164239266598a 118 SUPERFAMILY SSF53146 1 115 2.49E-32 T 23-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLI_RS11115 8e19d435e5f9f70770c164239266598a 118 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 8 96 1.8E-20 T 23-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLI_RS03995 8630524575f29ca5fc25f05306650ba7 325 Gene3D G3DSA:3.10.350.10 2 47 9.3E-13 T 23-04-2016 IPR018392 LysM domain CLI_RS03995 8630524575f29ca5fc25f05306650ba7 325 SMART SM00257 3 47 1.4E-7 T 23-04-2016 IPR018392 LysM domain CLI_RS03995 8630524575f29ca5fc25f05306650ba7 325 SUPERFAMILY SSF54106 2 48 6.15E-10 T 23-04-2016 IPR018392 LysM domain CLI_RS03995 8630524575f29ca5fc25f05306650ba7 325 Pfam PF01476 LysM domain 4 47 7.0E-7 T 23-04-2016 IPR018392 LysM domain CLI_RS03995 8630524575f29ca5fc25f05306650ba7 325 Pfam PF07485 Domain of Unknown Function (DUF1259) 68 185 3.8E-45 T 23-04-2016 IPR011094 Uncharacterised protein family, LppY/LpqO CLI_RS03995 8630524575f29ca5fc25f05306650ba7 325 Pfam PF07485 Domain of Unknown Function (DUF1259) 207 322 1.2E-41 T 23-04-2016 IPR011094 Uncharacterised protein family, LppY/LpqO CLI_RS01190 5bf4f4db2d50db3c3d255c445d50ae6d 304 PANTHER PTHR10314 5 304 2.1E-142 T 23-04-2016 CLI_RS01190 5bf4f4db2d50db3c3d255c445d50ae6d 304 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 290 1.8E-73 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS01190 5bf4f4db2d50db3c3d255c445d50ae6d 304 Gene3D G3DSA:3.40.50.1100 37 133 9.7E-44 T 23-04-2016 CLI_RS01190 5bf4f4db2d50db3c3d255c445d50ae6d 304 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 34 47 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CLI_RS01190 5bf4f4db2d50db3c3d255c445d50ae6d 304 PANTHER PTHR10314:SF8 5 304 2.1E-142 T 23-04-2016 CLI_RS01190 5bf4f4db2d50db3c3d255c445d50ae6d 304 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CLI_RS01190 5bf4f4db2d50db3c3d255c445d50ae6d 304 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 302 1.0E-132 T 23-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CLI_RS01190 5bf4f4db2d50db3c3d255c445d50ae6d 304 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 302 5.4E-130 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CLI_RS01190 5bf4f4db2d50db3c3d255c445d50ae6d 304 SUPERFAMILY SSF53686 2 302 3.93E-106 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS01190 5bf4f4db2d50db3c3d255c445d50ae6d 304 Gene3D G3DSA:3.40.50.1100 134 303 6.8E-75 T 23-04-2016 CLI_RS04500 e99be6c53813d03ae420996d387b60a9 205 Gene3D G3DSA:3.40.630.30 120 183 2.3E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04500 e99be6c53813d03ae420996d387b60a9 205 Gene3D G3DSA:3.40.630.30 5 80 2.3E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04500 e99be6c53813d03ae420996d387b60a9 205 Pfam PF00583 Acetyltransferase (GNAT) family 64 176 1.5E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS04500 e99be6c53813d03ae420996d387b60a9 205 PANTHER PTHR23091 117 182 6.0E-15 T 23-04-2016 CLI_RS04500 e99be6c53813d03ae420996d387b60a9 205 PANTHER PTHR23091 1 78 6.0E-15 T 23-04-2016 CLI_RS04500 e99be6c53813d03ae420996d387b60a9 205 SUPERFAMILY SSF55729 1 187 2.26E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS17605 9f9192e126ecabf8d23be9605a808535 105 PIRSF PIRSF000077 1 105 7.6E-42 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLI_RS17605 9f9192e126ecabf8d23be9605a808535 105 PRINTS PR00421 Thioredoxin family signature 21 29 1.7E-8 T 23-04-2016 CLI_RS17605 9f9192e126ecabf8d23be9605a808535 105 PRINTS PR00421 Thioredoxin family signature 29 38 1.7E-8 T 23-04-2016 CLI_RS17605 9f9192e126ecabf8d23be9605a808535 105 PRINTS PR00421 Thioredoxin family signature 69 80 1.7E-8 T 23-04-2016 CLI_RS17605 9f9192e126ecabf8d23be9605a808535 105 Gene3D G3DSA:3.40.30.10 2 104 3.3E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS17605 9f9192e126ecabf8d23be9605a808535 105 Pfam PF00085 Thioredoxin 2 104 1.4E-33 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 CLI_RS17605 9f9192e126ecabf8d23be9605a808535 105 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CLI_RS17605 9f9192e126ecabf8d23be9605a808535 105 PANTHER PTHR10438:SF256 1 105 2.6E-42 T 23-04-2016 CLI_RS17605 9f9192e126ecabf8d23be9605a808535 105 SUPERFAMILY SSF52833 2 105 4.23E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS17605 9f9192e126ecabf8d23be9605a808535 105 PANTHER PTHR10438 1 105 2.6E-42 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLI_RS17605 9f9192e126ecabf8d23be9605a808535 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 104 1.7E-40 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLI_RS16055 36ba3aa14800bf1fd380100e60df9e19 338 Gene3D G3DSA:3.40.50.150 2 185 2.2E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS16055 36ba3aa14800bf1fd380100e60df9e19 338 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 111 125 3.0E-18 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLI_RS16055 36ba3aa14800bf1fd380100e60df9e19 338 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 4 20 3.0E-18 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLI_RS16055 36ba3aa14800bf1fd380100e60df9e19 338 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 157 170 3.0E-18 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLI_RS16055 36ba3aa14800bf1fd380100e60df9e19 338 PANTHER PTHR10629:SF31 2 337 1.2E-44 T 23-04-2016 CLI_RS16055 36ba3aa14800bf1fd380100e60df9e19 338 Gene3D G3DSA:3.90.120.10 242 325 4.8E-12 T 23-04-2016 CLI_RS16055 36ba3aa14800bf1fd380100e60df9e19 338 Pfam PF00145 C-5 cytosine-specific DNA methylase 4 337 2.4E-68 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS16055 36ba3aa14800bf1fd380100e60df9e19 338 PANTHER PTHR10629 2 337 1.2E-44 T 23-04-2016 CLI_RS16055 36ba3aa14800bf1fd380100e60df9e19 338 SUPERFAMILY SSF53335 2 337 4.6E-72 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS16055 36ba3aa14800bf1fd380100e60df9e19 338 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 5 337 4.6E-73 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLI_RS12370 cace39d4c884aeba0333692bb3b8818b 156 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 5 98 7.7E-10 T 23-04-2016 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 CLI_RS00230 3227b9614c66d66b47bae119b9923986 234 SUPERFAMILY SSF69572 5 232 3.14E-60 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLI_RS00230 3227b9614c66d66b47bae119b9923986 234 PANTHER PTHR10953 182 233 8.1E-78 T 23-04-2016 CLI_RS00230 3227b9614c66d66b47bae119b9923986 234 PANTHER PTHR10953 1 157 8.1E-78 T 23-04-2016 CLI_RS00230 3227b9614c66d66b47bae119b9923986 234 Gene3D G3DSA:3.40.50.720 3 230 7.9E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS00230 3227b9614c66d66b47bae119b9923986 234 PANTHER PTHR10953:SF145 182 233 8.1E-78 T 23-04-2016 CLI_RS00230 3227b9614c66d66b47bae119b9923986 234 PANTHER PTHR10953:SF145 1 157 8.1E-78 T 23-04-2016 CLI_RS00230 3227b9614c66d66b47bae119b9923986 234 Pfam PF00899 ThiF family 10 170 1.1E-40 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLI_RS06635 e197db0f225f72af6e13735c38cb4cef 235 Pfam PF08858 IDEAL domain 197 228 1.7E-6 T 23-04-2016 IPR014957 IDEAL domain CLI_RS06635 e197db0f225f72af6e13735c38cb4cef 235 SMART SM00914 192 229 4.0E-9 T 23-04-2016 IPR014957 IDEAL domain CLI_RS16935 250144b3c414632f22f83c56f136668d 472 PANTHER PTHR30252 1 465 1.0E-159 T 23-04-2016 CLI_RS16935 250144b3c414632f22f83c56f136668d 472 Pfam PF02554 Carbon starvation protein CstA 4 142 4.2E-32 T 23-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CLI_RS16935 250144b3c414632f22f83c56f136668d 472 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 316 426 3.2E-24 T 23-04-2016 IPR025299 CstA, C-terminal domain CLI_RS16935 250144b3c414632f22f83c56f136668d 472 PANTHER PTHR30252:SF0 1 465 1.0E-159 T 23-04-2016 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 PANTHER PTHR11735:SF6 1 339 7.6E-157 T 23-04-2016 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 Gene3D G3DSA:3.30.420.40 6 163 5.5E-48 T 23-04-2016 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 5.5E-46 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 5.5E-46 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 5.5E-46 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 5.5E-46 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 5.5E-46 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 5.5E-46 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 5 337 63.081 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 7 318 4.6E-137 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 PANTHER PTHR11735 1 339 7.6E-157 T 23-04-2016 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 Pfam PF00814 Glycoprotease family 27 312 1.8E-103 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 SUPERFAMILY SSF53067 6 125 2.46E-31 T 23-04-2016 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 SUPERFAMILY SSF53067 105 317 7.78E-46 T 23-04-2016 CLI_RS16950 56ecf9a0592fcda2f92d5c365a5bfaae 340 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 8 312 1.9E-111 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLI_RS15500 1962790253cc189d836da621868759e9 967 SUPERFAMILY SSF117281 484 528 1.18E-7 T 23-04-2016 CLI_RS15500 1962790253cc189d836da621868759e9 967 SUPERFAMILY SSF117281 578 638 1.18E-7 T 23-04-2016 CLI_RS15500 1962790253cc189d836da621868759e9 967 SUPERFAMILY SSF117281 397 428 1.18E-7 T 23-04-2016 CLI_RS15500 1962790253cc189d836da621868759e9 967 SMART SM00646 853 962 1.1E-43 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS15500 1962790253cc189d836da621868759e9 967 SUPERFAMILY SSF117281 381 428 6.67E-8 T 23-04-2016 CLI_RS15500 1962790253cc189d836da621868759e9 967 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 787 962 7.2E-56 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS15500 1962790253cc189d836da621868759e9 967 SUPERFAMILY SSF53187 785 963 1.32E-59 T 23-04-2016 CLI_RS15500 1962790253cc189d836da621868759e9 967 PANTHER PTHR30032:SF6 303 961 0.0 T 23-04-2016 CLI_RS15500 1962790253cc189d836da621868759e9 967 SUPERFAMILY SSF117281 191 225 6.67E-8 T 23-04-2016 CLI_RS15500 1962790253cc189d836da621868759e9 967 SUPERFAMILY SSF117281 275 325 6.67E-8 T 23-04-2016 CLI_RS15500 1962790253cc189d836da621868759e9 967 Gene3D G3DSA:3.40.630.40 785 963 2.5E-61 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS15500 1962790253cc189d836da621868759e9 967 PANTHER PTHR30032 303 961 0.0 T 23-04-2016 CLI_RS06280 647be9f77af56a289c31a5118a9050d2 490 PANTHER PTHR37303 1 490 2.9E-216 T 23-04-2016 CLI_RS06280 647be9f77af56a289c31a5118a9050d2 490 PANTHER PTHR37303:SF1 1 490 2.9E-216 T 23-04-2016 CLI_RS04220 e99aefec833929d12cfc9ead1529c114 279 SUPERFAMILY SSF52821 4 134 1.44E-32 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS04220 e99aefec833929d12cfc9ead1529c114 279 Gene3D G3DSA:3.40.250.10 149 277 2.2E-24 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS04220 e99aefec833929d12cfc9ead1529c114 279 Gene3D G3DSA:3.40.250.10 3 140 5.2E-39 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS04220 e99aefec833929d12cfc9ead1529c114 279 SUPERFAMILY SSF52821 160 277 3.27E-21 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS04220 e99aefec833929d12cfc9ead1529c114 279 Pfam PF00581 Rhodanese-like domain 164 269 2.5E-9 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS04220 e99aefec833929d12cfc9ead1529c114 279 Pfam PF00581 Rhodanese-like domain 6 126 4.5E-21 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS04220 e99aefec833929d12cfc9ead1529c114 279 PANTHER PTHR11364:SF0 2 276 2.4E-88 T 23-04-2016 CLI_RS04220 e99aefec833929d12cfc9ead1529c114 279 PANTHER PTHR11364 2 276 2.4E-88 T 23-04-2016 CLI_RS04220 e99aefec833929d12cfc9ead1529c114 279 SMART SM00450 160 274 4.7E-12 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS04220 e99aefec833929d12cfc9ead1529c114 279 SMART SM00450 5 131 3.2E-18 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS15235 af62b2275a07363e1fe831791e2eb360 149 Gene3D G3DSA:3.50.80.10 1 145 1.3E-58 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain CLI_RS15235 af62b2275a07363e1fe831791e2eb360 149 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 2.3E-54 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CLI_RS15235 af62b2275a07363e1fe831791e2eb360 149 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.308 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CLI_RS15235 af62b2275a07363e1fe831791e2eb360 149 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 146 3.2E-55 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CLI_RS15235 af62b2275a07363e1fe831791e2eb360 149 SUPERFAMILY SSF69500 1 145 1.44E-55 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain CLI_RS15235 af62b2275a07363e1fe831791e2eb360 149 PANTHER PTHR10472 2 147 5.3E-81 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 SUPERFAMILY SSF101386 360 453 2.06E-25 T 23-04-2016 CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 PIRSF PIRSF002845 1 481 7.1E-225 T 23-04-2016 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 251 324 5.1E-29 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 387 448 1.9E-8 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 PANTHER PTHR30522:SF0 1 481 5.4E-171 T 23-04-2016 IPR011551 NTP pyrophosphohydrolase MazG CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 PANTHER PTHR30522 1 481 5.4E-171 T 23-04-2016 CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 205 1.2E-28 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 TIGRFAM TIGR00444 mazG: MazG family protein 235 479 3.5E-94 T 23-04-2016 IPR011551 NTP pyrophosphohydrolase MazG CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 SUPERFAMILY SSF101386 227 328 8.34E-25 T 23-04-2016 CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 SUPERFAMILY SSF53790 1 253 3.78E-33 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 Gene3D G3DSA:3.40.1010.10 1 117 1.5E-14 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 Gene3D G3DSA:1.10.287.1080 219 296 2.4E-9 T 23-04-2016 CLI_RS18215 ed34e316ac6df540f5908ddbbfaf4945 481 Gene3D G3DSA:1.10.287.1080 356 444 1.0E-17 T 23-04-2016 CLI_RS17635 616f3bde2e5967cf91a3f9d9dcbd08cf 235 Gene3D G3DSA:1.25.40.10 162 211 4.2E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS17635 616f3bde2e5967cf91a3f9d9dcbd08cf 235 Gene3D G3DSA:1.25.40.10 81 161 1.1E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS17635 616f3bde2e5967cf91a3f9d9dcbd08cf 235 SUPERFAMILY SSF48452 80 210 1.21E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS17635 616f3bde2e5967cf91a3f9d9dcbd08cf 235 SMART SM00028 111 144 0.11 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS17635 616f3bde2e5967cf91a3f9d9dcbd08cf 235 SMART SM00028 179 211 14.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS17635 616f3bde2e5967cf91a3f9d9dcbd08cf 235 SMART SM00028 77 110 110.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS17635 616f3bde2e5967cf91a3f9d9dcbd08cf 235 SMART SM00028 145 178 0.02 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS17635 616f3bde2e5967cf91a3f9d9dcbd08cf 235 PANTHER PTHR23083 87 209 4.3E-19 T 23-04-2016 CLI_RS17635 616f3bde2e5967cf91a3f9d9dcbd08cf 235 Pfam PF13181 Tetratricopeptide repeat 147 176 0.13 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS17635 616f3bde2e5967cf91a3f9d9dcbd08cf 235 Pfam PF13181 Tetratricopeptide repeat 180 209 2.0E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS13125 59efdbc67a2cf496ced5f868c7e57ea9 156 Pfam PF01327 Polypeptide deformylase 4 149 2.6E-45 T 23-04-2016 IPR023635 Peptide deformylase CLI_RS13125 59efdbc67a2cf496ced5f868c7e57ea9 156 PIRSF PIRSF004749 1 154 4.4E-46 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS13125 59efdbc67a2cf496ced5f868c7e57ea9 156 PANTHER PTHR10458 1 156 4.6E-59 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS13125 59efdbc67a2cf496ced5f868c7e57ea9 156 Gene3D G3DSA:3.90.45.10 5 150 3.9E-49 T 23-04-2016 IPR023635 Peptide deformylase CLI_RS13125 59efdbc67a2cf496ced5f868c7e57ea9 156 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 151 2.1E-42 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS13125 59efdbc67a2cf496ced5f868c7e57ea9 156 Hamap MF_00163 Peptide deformylase [def]. 2 155 26.784 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS13125 59efdbc67a2cf496ced5f868c7e57ea9 156 PRINTS PR01576 Peptide deformylase signature 33 62 1.9E-30 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS13125 59efdbc67a2cf496ced5f868c7e57ea9 156 PRINTS PR01576 Peptide deformylase signature 100 118 1.9E-30 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS13125 59efdbc67a2cf496ced5f868c7e57ea9 156 PRINTS PR01576 Peptide deformylase signature 88 99 1.9E-30 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS13125 59efdbc67a2cf496ced5f868c7e57ea9 156 PRINTS PR01576 Peptide deformylase signature 119 148 1.9E-30 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CLI_RS13125 59efdbc67a2cf496ced5f868c7e57ea9 156 SUPERFAMILY SSF56420 2 152 2.09E-47 T 23-04-2016 IPR023635 Peptide deformylase CLI_RS08355 d79dedb57ec0d339336eee6240890500 107 Pfam PF09585 Conserved hypothetical protein (Lin0512_fam) 1 104 1.9E-31 T 23-04-2016 IPR011719 Conserved hypothetical protein CHP02058 CLI_RS08355 d79dedb57ec0d339336eee6240890500 107 TIGRFAM TIGR02058 lin0512_fam: conserved hypothetical protein 1 104 1.1E-19 T 23-04-2016 IPR011719 Conserved hypothetical protein CHP02058 CLI_RS08355 d79dedb57ec0d339336eee6240890500 107 PANTHER PTHR34784 1 106 3.0E-39 T 23-04-2016 CLI_RS08355 d79dedb57ec0d339336eee6240890500 107 Gene3D G3DSA:3.30.1330.20 1 106 4.0E-34 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CLI_RS02975 9316b1d4a171473ecff4b6ffdb882164 547 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 376 495 4.1E-38 T 23-04-2016 IPR025299 CstA, C-terminal domain CLI_RS02975 9316b1d4a171473ecff4b6ffdb882164 547 PANTHER PTHR30252:SF0 1 546 7.0E-233 T 23-04-2016 CLI_RS02975 9316b1d4a171473ecff4b6ffdb882164 547 Pfam PF02554 Carbon starvation protein CstA 1 351 4.9E-126 T 23-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CLI_RS02975 9316b1d4a171473ecff4b6ffdb882164 547 PANTHER PTHR30252 1 546 7.0E-233 T 23-04-2016 CLI_RS12760 38edbf19614f2151c85eb71bda9dbe18 267 Pfam PF03837 RecT family 34 238 2.0E-43 T 23-04-2016 IPR018330 RecT family GO:0003677|GO:0006259 CLI_RS12760 38edbf19614f2151c85eb71bda9dbe18 267 TIGRFAM TIGR00616 rect: recombinase, phage RecT family 19 226 1.2E-24 T 23-04-2016 IPR004590 DNA single-strand annealing protein RecT GO:0003677|GO:0006259 CLI_RS08985 da9d798983a12b3b1db7d3d9c30d2298 233 Pfam PF05857 TraX protein 5 229 1.6E-43 T 23-04-2016 IPR008875 TraX CLI_RS11240 682f6047f024b2eca521ebb14cbe6f28 467 Pfam PF13520 Amino acid permease 11 430 3.2E-30 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS11240 682f6047f024b2eca521ebb14cbe6f28 467 PIRSF PIRSF006060 1 466 1.6E-46 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS11240 682f6047f024b2eca521ebb14cbe6f28 467 PANTHER PTHR11785:SF277 6 467 6.0E-266 T 23-04-2016 CLI_RS11240 682f6047f024b2eca521ebb14cbe6f28 467 PANTHER PTHR11785 6 467 6.0E-266 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS13985 341ce0413cf185394385918670eb4c2c 342 Gene3D G3DSA:1.10.620.20 16 313 3.6E-103 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 CLI_RS13985 341ce0413cf185394385918670eb4c2c 342 PIRSF PIRSF000355 1 341 3.4E-128 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CLI_RS13985 341ce0413cf185394385918670eb4c2c 342 PANTHER PTHR23409 2 334 3.3E-98 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CLI_RS13985 341ce0413cf185394385918670eb4c2c 342 SUPERFAMILY SSF47240 15 336 3.96E-92 T 23-04-2016 IPR009078 Ferritin-like superfamily CLI_RS13985 341ce0413cf185394385918670eb4c2c 342 Pfam PF00268 Ribonucleotide reductase, small chain 28 300 2.5E-79 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CLI_RS14830 38d38542261d4c12472b85bd51908837 126 SUPERFAMILY SSF55298 1 126 7.23E-48 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLI_RS14830 38d38542261d4c12472b85bd51908837 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 5 125 5.9E-55 T 23-04-2016 IPR006056 RidA family CLI_RS14830 38d38542261d4c12472b85bd51908837 126 Pfam PF01042 Endoribonuclease L-PSP 8 125 7.9E-47 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family CLI_RS14830 38d38542261d4c12472b85bd51908837 126 Gene3D G3DSA:3.30.1330.40 3 125 1.1E-52 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLI_RS14830 38d38542261d4c12472b85bd51908837 126 PANTHER PTHR11803 1 126 2.4E-61 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family CLI_RS14830 38d38542261d4c12472b85bd51908837 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 23-04-2016 IPR019897 RidA, conserved site CLI_RS07260 f89e8a712dd0c72ee59688cfee683cb3 233 Gene3D G3DSA:1.10.10.10 131 228 1.5E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07260 f89e8a712dd0c72ee59688cfee683cb3 233 SMART SM00448 3 113 2.5E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS07260 f89e8a712dd0c72ee59688cfee683cb3 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 227 1.5E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS07260 f89e8a712dd0c72ee59688cfee683cb3 233 PANTHER PTHR26402:SF519 3 231 2.1E-136 T 23-04-2016 CLI_RS07260 f89e8a712dd0c72ee59688cfee683cb3 233 SUPERFAMILY SSF46894 131 228 4.25E-23 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS07260 f89e8a712dd0c72ee59688cfee683cb3 233 SMART SM00862 152 227 9.9E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS07260 f89e8a712dd0c72ee59688cfee683cb3 233 PANTHER PTHR26402 3 231 2.1E-136 T 23-04-2016 CLI_RS07260 f89e8a712dd0c72ee59688cfee683cb3 233 SUPERFAMILY SSF52172 2 126 2.13E-34 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS07260 f89e8a712dd0c72ee59688cfee683cb3 233 Gene3D G3DSA:3.40.50.2300 2 121 1.9E-34 T 23-04-2016 CLI_RS07260 f89e8a712dd0c72ee59688cfee683cb3 233 Pfam PF00072 Response regulator receiver domain 5 113 1.0E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS02390 d0adba4731558ee24b67e68571a2d6b8 216 SUPERFAMILY SSF48452 80 212 2.31E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS02390 d0adba4731558ee24b67e68571a2d6b8 216 Gene3D G3DSA:1.25.40.10 67 212 1.6E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS02390 d0adba4731558ee24b67e68571a2d6b8 216 SMART SM00028 168 202 36.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS02390 d0adba4731558ee24b67e68571a2d6b8 216 SMART SM00028 127 160 6.2E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS15475 a1d9e520ecf3f16fc464b9ed52e318b7 248 Gene3D G3DSA:2.160.10.10 114 246 9.5E-36 T 23-04-2016 CLI_RS15475 a1d9e520ecf3f16fc464b9ed52e318b7 248 Gene3D G3DSA:2.160.10.10 4 113 6.2E-28 T 23-04-2016 CLI_RS15475 a1d9e520ecf3f16fc464b9ed52e318b7 248 PANTHER PTHR23416 179 248 2.1E-57 T 23-04-2016 CLI_RS15475 a1d9e520ecf3f16fc464b9ed52e318b7 248 PANTHER PTHR23416 22 58 2.1E-57 T 23-04-2016 CLI_RS15475 a1d9e520ecf3f16fc464b9ed52e318b7 248 PANTHER PTHR23416 76 160 2.1E-57 T 23-04-2016 CLI_RS15475 a1d9e520ecf3f16fc464b9ed52e318b7 248 PANTHER PTHR23416:SF53 179 248 2.1E-57 T 23-04-2016 CLI_RS15475 a1d9e520ecf3f16fc464b9ed52e318b7 248 PANTHER PTHR23416:SF53 22 58 2.1E-57 T 23-04-2016 CLI_RS15475 a1d9e520ecf3f16fc464b9ed52e318b7 248 PANTHER PTHR23416:SF53 76 160 2.1E-57 T 23-04-2016 CLI_RS15475 a1d9e520ecf3f16fc464b9ed52e318b7 248 SUPERFAMILY SSF51161 5 242 4.07E-42 T 23-04-2016 IPR011004 Trimeric LpxA-like CLI_RS15475 a1d9e520ecf3f16fc464b9ed52e318b7 248 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 167 7.9E-5 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS15475 a1d9e520ecf3f16fc464b9ed52e318b7 248 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 43 6.8E-9 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS15475 a1d9e520ecf3f16fc464b9ed52e318b7 248 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 98 132 5.4E-8 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS17800 99b6ecfe2453d9c60e30c0035fc8c13a 70 Gene3D G3DSA:1.10.287.310 6 65 1.5E-30 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17800 99b6ecfe2453d9c60e30c0035fc8c13a 70 SUPERFAMILY SSF46561 6 65 1.7E-22 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17800 99b6ecfe2453d9c60e30c0035fc8c13a 70 PANTHER PTHR10916 1 67 7.5E-29 T 23-04-2016 CLI_RS17800 99b6ecfe2453d9c60e30c0035fc8c13a 70 PANTHER PTHR10916:SF0 1 67 7.5E-29 T 23-04-2016 CLI_RS17800 99b6ecfe2453d9c60e30c0035fc8c13a 70 Pfam PF00831 Ribosomal L29 protein 7 62 2.6E-27 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17800 99b6ecfe2453d9c60e30c0035fc8c13a 70 ProSitePatterns PS00579 Ribosomal protein L29 signature. 42 56 - T 23-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17800 99b6ecfe2453d9c60e30c0035fc8c13a 70 TIGRFAM TIGR00012 L29: ribosomal protein uL29 8 63 1.0E-26 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17800 99b6ecfe2453d9c60e30c0035fc8c13a 70 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 63 18.15 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS10315 ad36f75e835792e62cadaab0e5bd5266 597 Pfam PF06100 MCRA family 32 531 3.4E-201 T 23-04-2016 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 UniPathway: UPA00199 CLI_RS10315 ad36f75e835792e62cadaab0e5bd5266 597 PANTHER PTHR37417 7 594 0.0 T 23-04-2016 CLI_RS10315 ad36f75e835792e62cadaab0e5bd5266 597 Gene3D G3DSA:3.50.50.60 31 83 2.4E-5 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS10315 ad36f75e835792e62cadaab0e5bd5266 597 Gene3D G3DSA:3.50.50.60 243 283 2.4E-5 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS10315 ad36f75e835792e62cadaab0e5bd5266 597 SUPERFAMILY SSF51905 37 274 3.6E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS10315 ad36f75e835792e62cadaab0e5bd5266 597 PANTHER PTHR37417:SF1 7 594 0.0 T 23-04-2016 CLI_RS02670 b1e3c712640aff17881e2028a532d9a4 452 PANTHER PTHR37809 67 452 9.1E-16 T 23-04-2016 CLI_RS02670 b1e3c712640aff17881e2028a532d9a4 452 TIGRFAM TIGR03604 TOMM_cyclo_SagD: thiazole/oxazole-forming peptide maturase, SagD family component 69 452 1.2E-106 T 23-04-2016 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component CLI_RS02670 b1e3c712640aff17881e2028a532d9a4 452 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 68 421 2.3E-49 T 23-04-2016 IPR003776 YcaO-like domain CLI_RS08900 d5ff368f2e8a2d74ce2324f5af1acc67 171 SUPERFAMILY SSF55729 1 156 3.43E-28 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS08900 d5ff368f2e8a2d74ce2324f5af1acc67 171 Gene3D G3DSA:3.40.630.30 1 166 3.1E-47 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS08900 d5ff368f2e8a2d74ce2324f5af1acc67 171 Pfam PF00583 Acetyltransferase (GNAT) family 84 144 7.9E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS08900 d5ff368f2e8a2d74ce2324f5af1acc67 171 PANTHER PTHR23091 1 150 1.0E-26 T 23-04-2016 CLI_RS08900 d5ff368f2e8a2d74ce2324f5af1acc67 171 PANTHER PTHR23091:SF247 1 150 1.0E-26 T 23-04-2016 CLI_RS09575 6e04de664d54dd473aac21f1b4ea4de7 65 Pfam PF06686 Stage III sporulation protein AC/AD protein family 7 62 1.4E-15 T 23-04-2016 IPR025664 Stage III sporulation protein AC/AD family CLI_RS09575 6e04de664d54dd473aac21f1b4ea4de7 65 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 2 65 6.1E-29 T 23-04-2016 IPR009570 Stage III sporulation protein AC CLI_RS07575 f5cd522a3b0d1ea339f25a083de3bb1b 219 Pfam PF05103 DivIVA protein 3 133 9.8E-48 T 23-04-2016 IPR007793 DivIVA family CLI_RS07575 f5cd522a3b0d1ea339f25a083de3bb1b 219 PANTHER PTHR35794 1 218 1.6E-97 T 23-04-2016 CLI_RS07575 f5cd522a3b0d1ea339f25a083de3bb1b 219 PANTHER PTHR35794:SF2 1 218 1.6E-97 T 23-04-2016 CLI_RS07575 f5cd522a3b0d1ea339f25a083de3bb1b 219 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 3.2E-17 T 23-04-2016 IPR019933 DivIVA domain CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 Gene3D G3DSA:1.10.287.130 233 294 3.4E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 SMART SM00304 190 242 5.3E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 Pfam PF00672 HAMP domain 171 238 1.1E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 306 5.9E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 SUPERFAMILY SSF47384 226 310 9.22E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 SMART SM00388 243 309 1.8E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 460 1.7E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 SUPERFAMILY SSF55874 299 461 3.14E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 SMART SM00387 355 463 1.5E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 Gene3D G3DSA:3.30.565.10 295 461 2.6E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 Gene3D G3DSA:3.30.450.20 43 159 1.0E-7 T 23-04-2016 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 PANTHER PTHR24423 69 121 9.6E-86 T 23-04-2016 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 PANTHER PTHR24423 3 10 9.6E-86 T 23-04-2016 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 PANTHER PTHR24423 184 461 9.6E-86 T 23-04-2016 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 SUPERFAMILY SSF158472 191 238 2.88E-8 T 23-04-2016 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 6.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 6.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 6.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01970 1f9b3dfb1cafa4615e279d1c9f05dc07 464 SUPERFAMILY SSF103190 73 156 4.71E-5 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS14200 8e267cdbed8224e80b5fbb8f64dca517 405 Pfam PF00999 Sodium/hydrogen exchanger family 12 387 1.5E-71 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CLI_RS14200 8e267cdbed8224e80b5fbb8f64dca517 405 PANTHER PTHR32468 5 391 1.1E-136 T 23-04-2016 CLI_RS14200 8e267cdbed8224e80b5fbb8f64dca517 405 PANTHER PTHR32468:SF4 5 391 1.1E-136 T 23-04-2016 CLI_RS17610 e1a95232428a76f91b6f7af93399d5ab 391 Gene3D G3DSA:2.30.40.10 330 385 3.2E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS17610 e1a95232428a76f91b6f7af93399d5ab 391 Pfam PF01979 Amidohydrolase family 53 375 3.5E-16 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CLI_RS17610 e1a95232428a76f91b6f7af93399d5ab 391 Gene3D G3DSA:2.30.40.10 3 64 3.1E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS17610 e1a95232428a76f91b6f7af93399d5ab 391 PIRSF PIRSF001238 1 391 1.5E-171 T 23-04-2016 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 CLI_RS17610 e1a95232428a76f91b6f7af93399d5ab 391 Gene3D G3DSA:3.20.20.140 65 329 7.1E-125 T 23-04-2016 CLI_RS17610 e1a95232428a76f91b6f7af93399d5ab 391 SUPERFAMILY SSF51338 1 56 2.83E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS17610 e1a95232428a76f91b6f7af93399d5ab 391 SUPERFAMILY SSF51338 347 389 2.83E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLI_RS17610 e1a95232428a76f91b6f7af93399d5ab 391 SUPERFAMILY SSF51556 57 347 1.67E-71 T 23-04-2016 IPR032466 Metal-dependent hydrolase CLI_RS17610 e1a95232428a76f91b6f7af93399d5ab 391 PANTHER PTHR11647:SF72 4 162 1.6E-45 T 23-04-2016 CLI_RS17610 e1a95232428a76f91b6f7af93399d5ab 391 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 3 390 4.7E-172 T 23-04-2016 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 CLI_RS17610 e1a95232428a76f91b6f7af93399d5ab 391 PANTHER PTHR11647 4 162 1.6E-45 T 23-04-2016 CLI_RS09605 32d18958708e3b0bb9a4131c044ac05d 170 PRINTS PR01100 Shikimate kinase family signature 56 64 4.1E-22 T 23-04-2016 CLI_RS09605 32d18958708e3b0bb9a4131c044ac05d 170 PRINTS PR01100 Shikimate kinase family signature 28 41 4.1E-22 T 23-04-2016 CLI_RS09605 32d18958708e3b0bb9a4131c044ac05d 170 PRINTS PR01100 Shikimate kinase family signature 74 83 4.1E-22 T 23-04-2016 CLI_RS09605 32d18958708e3b0bb9a4131c044ac05d 170 PRINTS PR01100 Shikimate kinase family signature 4 19 4.1E-22 T 23-04-2016 CLI_RS09605 32d18958708e3b0bb9a4131c044ac05d 170 PRINTS PR01100 Shikimate kinase family signature 95 112 4.1E-22 T 23-04-2016 CLI_RS09605 32d18958708e3b0bb9a4131c044ac05d 170 PANTHER PTHR21087 2 159 6.8E-54 T 23-04-2016 CLI_RS09605 32d18958708e3b0bb9a4131c044ac05d 170 PANTHER PTHR21087:SF0 2 159 6.8E-54 T 23-04-2016 CLI_RS09605 32d18958708e3b0bb9a4131c044ac05d 170 Pfam PF01202 Shikimate kinase 12 155 9.1E-41 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS09605 32d18958708e3b0bb9a4131c044ac05d 170 Gene3D G3DSA:3.40.50.300 2 165 1.5E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09605 32d18958708e3b0bb9a4131c044ac05d 170 SUPERFAMILY SSF52540 3 165 6.63E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09605 32d18958708e3b0bb9a4131c044ac05d 170 Hamap MF_00109 Shikimate kinase [aroK]. 1 165 24.179 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS17410 452544422ed0d74c4b93a47d4702aae9 313 SUPERFAMILY SSF52518 3 172 4.32E-64 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS17410 452544422ed0d74c4b93a47d4702aae9 313 Pfam PF02780 Transketolase, C-terminal domain 182 302 6.5E-36 T 23-04-2016 IPR033248 Transketolase, C-terminal domain CLI_RS17410 452544422ed0d74c4b93a47d4702aae9 313 Pfam PF02779 Transketolase, pyrimidine binding domain 4 168 1.5E-44 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CLI_RS17410 452544422ed0d74c4b93a47d4702aae9 313 Gene3D G3DSA:3.40.50.970 4 182 1.3E-69 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CLI_RS17410 452544422ed0d74c4b93a47d4702aae9 313 PANTHER PTHR11624 1 313 4.9E-139 T 23-04-2016 IPR033247 Transketolase family CLI_RS17410 452544422ed0d74c4b93a47d4702aae9 313 SMART SM00861 5 170 3.5E-68 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CLI_RS17410 452544422ed0d74c4b93a47d4702aae9 313 Gene3D G3DSA:3.40.50.920 183 310 2.2E-43 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLI_RS17410 452544422ed0d74c4b93a47d4702aae9 313 PANTHER PTHR11624:SF2 1 313 4.9E-139 T 23-04-2016 CLI_RS17410 452544422ed0d74c4b93a47d4702aae9 313 SUPERFAMILY SSF52922 179 310 1.96E-40 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLI_RS16465 17da9e1c2b3e47154589c1ac7e6de7dd 191 SUPERFAMILY SSF53271 9 150 1.22E-38 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS16465 17da9e1c2b3e47154589c1ac7e6de7dd 191 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 5 188 6.2E-71 T 23-04-2016 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS16465 17da9e1c2b3e47154589c1ac7e6de7dd 191 PANTHER PTHR19278 5 172 2.3E-46 T 23-04-2016 CLI_RS16465 17da9e1c2b3e47154589c1ac7e6de7dd 191 Pfam PF00156 Phosphoribosyl transferase domain 42 164 6.2E-13 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS16465 17da9e1c2b3e47154589c1ac7e6de7dd 191 Gene3D G3DSA:3.40.50.2020 5 190 1.2E-46 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS16465 17da9e1c2b3e47154589c1ac7e6de7dd 191 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 191 25.803 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 CLI_RS04385 9ad36893776b2e38e9671b886bf0a36a 151 PANTHER PTHR20941 1 150 9.1E-74 T 23-04-2016 CLI_RS04385 9ad36893776b2e38e9671b886bf0a36a 151 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 131 6.7E-39 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CLI_RS04385 9ad36893776b2e38e9671b886bf0a36a 151 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 87 98 - T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CLI_RS04385 9ad36893776b2e38e9671b886bf0a36a 151 SUPERFAMILY SSF55083 1 150 3.66E-53 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CLI_RS04385 9ad36893776b2e38e9671b886bf0a36a 151 Gene3D G3DSA:3.30.70.560 2 150 2.7E-57 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CLI_RS04385 9ad36893776b2e38e9671b886bf0a36a 151 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 131 2.0E-44 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CLI_RS07975 16a4e42d5310e4385e4027286e913ef8 314 PANTHER PTHR30595 1 292 1.1E-140 T 23-04-2016 CLI_RS07975 16a4e42d5310e4385e4027286e913ef8 314 Gene3D G3DSA:1.10.10.10 2 59 7.2E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07975 16a4e42d5310e4385e4027286e913ef8 314 PIRSF PIRSF016838 1 313 8.3E-25 T 23-04-2016 IPR028349 Protein PafC CLI_RS07975 16a4e42d5310e4385e4027286e913ef8 314 PANTHER PTHR30595:SF5 1 292 1.1E-140 T 23-04-2016 CLI_RS07975 16a4e42d5310e4385e4027286e913ef8 314 Pfam PF08279 HTH domain 5 53 8.1E-15 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 CLI_RS07975 16a4e42d5310e4385e4027286e913ef8 314 SUPERFAMILY SSF46785 2 52 1.09E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07975 16a4e42d5310e4385e4027286e913ef8 314 Pfam PF13280 WYL domain 143 306 9.1E-35 T 23-04-2016 IPR026881 WYL domain CLI_RS04780 e5a4ed060635e74de9651bb1cbcd0d68 223 Gene3D G3DSA:1.10.10.10 126 221 1.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04780 e5a4ed060635e74de9651bb1cbcd0d68 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 219 2.5E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS04780 e5a4ed060635e74de9651bb1cbcd0d68 223 SMART SM00448 2 113 2.1E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS04780 e5a4ed060635e74de9651bb1cbcd0d68 223 PANTHER PTHR26402:SF405 2 219 1.5E-101 T 23-04-2016 CLI_RS04780 e5a4ed060635e74de9651bb1cbcd0d68 223 SMART SM00862 146 220 9.9E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS04780 e5a4ed060635e74de9651bb1cbcd0d68 223 SUPERFAMILY SSF52172 1 179 3.7E-42 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS04780 e5a4ed060635e74de9651bb1cbcd0d68 223 PANTHER PTHR26402 2 219 1.5E-101 T 23-04-2016 CLI_RS04780 e5a4ed060635e74de9651bb1cbcd0d68 223 Gene3D G3DSA:3.40.50.2300 1 125 9.0E-40 T 23-04-2016 CLI_RS04780 e5a4ed060635e74de9651bb1cbcd0d68 223 Pfam PF00072 Response regulator receiver domain 4 113 1.6E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS07565 085e64bd83c769b48a7c43dc433f58c9 91 PANTHER PTHR33219 5 91 1.7E-19 T 23-04-2016 CLI_RS07565 085e64bd83c769b48a7c43dc433f58c9 91 Pfam PF02325 YGGT family 12 84 7.3E-19 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 CLI_RS01620 e12db1a1d8b89b5744e995213515b0ff 253 Gene3D G3DSA:1.10.10.10 13 64 4.2E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01620 e12db1a1d8b89b5744e995213515b0ff 253 PANTHER PTHR30514:SF1 14 249 5.1E-55 T 23-04-2016 CLI_RS01620 e12db1a1d8b89b5744e995213515b0ff 253 SUPERFAMILY SSF53697 93 250 8.9E-24 T 23-04-2016 CLI_RS01620 e12db1a1d8b89b5744e995213515b0ff 253 Pfam PF01380 SIS domain 120 237 1.3E-12 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CLI_RS01620 e12db1a1d8b89b5744e995213515b0ff 253 PANTHER PTHR30514 14 249 5.1E-55 T 23-04-2016 CLI_RS01620 e12db1a1d8b89b5744e995213515b0ff 253 Gene3D G3DSA:3.40.50.10490 65 249 3.9E-26 T 23-04-2016 CLI_RS01620 e12db1a1d8b89b5744e995213515b0ff 253 Pfam PF01418 Helix-turn-helix domain, rpiR family 12 73 3.0E-9 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLI_RS01620 e12db1a1d8b89b5744e995213515b0ff 253 SUPERFAMILY SSF46689 13 78 2.69E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS02825 06beaef65a1aea220082cd149e9c7f70 216 SUPERFAMILY SSF46609 6 82 1.54E-9 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS02825 06beaef65a1aea220082cd149e9c7f70 216 PANTHER PTHR11404:SF6 7 207 1.6E-60 T 23-04-2016 CLI_RS02825 06beaef65a1aea220082cd149e9c7f70 216 SUPERFAMILY SSF54719 87 193 7.07E-31 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS02825 06beaef65a1aea220082cd149e9c7f70 216 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 90 188 4.7E-24 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS02825 06beaef65a1aea220082cd149e9c7f70 216 PANTHER PTHR11404 7 207 1.6E-60 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS02825 06beaef65a1aea220082cd149e9c7f70 216 PIRSF PIRSF000349 3 197 4.5E-44 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CLI_RS07580 d1b200ad2863155ffac3be9311094b69 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 355 35.795 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CLI_RS07580 d1b200ad2863155ffac3be9311094b69 362 SUPERFAMILY SSF56796 9 354 1.05E-95 T 23-04-2016 CLI_RS07580 d1b200ad2863155ffac3be9311094b69 362 PIRSF PIRSF001455 5 361 1.5E-109 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CLI_RS07580 d1b200ad2863155ffac3be9311094b69 362 PANTHER PTHR21090 15 358 5.5E-122 T 23-04-2016 CLI_RS07580 d1b200ad2863155ffac3be9311094b69 362 Pfam PF01761 3-dehydroquinate synthase 67 324 4.5E-93 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CLI_RS07580 d1b200ad2863155ffac3be9311094b69 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 15 352 2.6E-110 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CLI_RS07580 d1b200ad2863155ffac3be9311094b69 362 Gene3D G3DSA:1.20.1090.10 173 354 7.6E-53 T 23-04-2016 CLI_RS07580 d1b200ad2863155ffac3be9311094b69 362 Gene3D G3DSA:3.40.50.1970 5 172 4.0E-59 T 23-04-2016 CLI_RS03625 6285fe61fc39ec6c56d65b8a7f035707 261 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS03625 6285fe61fc39ec6c56d65b8a7f035707 261 PANTHER PTHR24220:SF438 5 258 6.8E-158 T 23-04-2016 CLI_RS03625 6285fe61fc39ec6c56d65b8a7f035707 261 SMART SM00382 28 217 2.5E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03625 6285fe61fc39ec6c56d65b8a7f035707 261 Pfam PF00005 ABC transporter 20 167 1.8E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03625 6285fe61fc39ec6c56d65b8a7f035707 261 PANTHER PTHR24220 5 258 6.8E-158 T 23-04-2016 CLI_RS03625 6285fe61fc39ec6c56d65b8a7f035707 261 Gene3D G3DSA:3.40.50.300 3 239 5.2E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03625 6285fe61fc39ec6c56d65b8a7f035707 261 SUPERFAMILY SSF52540 4 230 5.01E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05345 577ff80b2ddc8e93196822069ad17fc3 187 PIRSF PIRSF000847 2 187 1.1E-23 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CLI_RS05345 577ff80b2ddc8e93196822069ad17fc3 187 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 56 78 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLI_RS05345 577ff80b2ddc8e93196822069ad17fc3 187 PANTHER PTHR14269 7 102 3.8E-15 T 23-04-2016 CLI_RS05345 577ff80b2ddc8e93196822069ad17fc3 187 Pfam PF01066 CDP-alcohol phosphatidyltransferase 7 78 1.9E-13 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLI_RS02700 3e798b27ab05f59660f55a4cdc550ccb 219 PANTHER PTHR35864 1 219 1.2E-37 T 23-04-2016 CLI_RS02700 3e798b27ab05f59660f55a4cdc550ccb 219 Pfam PF02163 Peptidase family M50 135 188 1.7E-7 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 CLI_RS09870 81d1e9b5280a8c44cc28f1f22e2b9896 223 SMART SM00382 33 219 3.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS09870 81d1e9b5280a8c44cc28f1f22e2b9896 223 PANTHER PTHR24220 6 220 2.2E-138 T 23-04-2016 CLI_RS09870 81d1e9b5280a8c44cc28f1f22e2b9896 223 Gene3D G3DSA:3.40.50.300 2 219 3.4E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09870 81d1e9b5280a8c44cc28f1f22e2b9896 223 PANTHER PTHR24220:SF587 6 220 2.2E-138 T 23-04-2016 CLI_RS09870 81d1e9b5280a8c44cc28f1f22e2b9896 223 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS09870 81d1e9b5280a8c44cc28f1f22e2b9896 223 Pfam PF00005 ABC transporter 24 170 3.3E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS09870 81d1e9b5280a8c44cc28f1f22e2b9896 223 SUPERFAMILY SSF52540 3 219 1.27E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11290 ff0b543c44a8753356cd107f092e2508 145 SUPERFAMILY SSF55729 1 140 5.67E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS11290 ff0b543c44a8753356cd107f092e2508 145 PANTHER PTHR23091 50 139 4.8E-13 T 23-04-2016 CLI_RS11290 ff0b543c44a8753356cd107f092e2508 145 Gene3D G3DSA:3.40.630.30 1 141 1.9E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS11290 ff0b543c44a8753356cd107f092e2508 145 Pfam PF13673 Acetyltransferase (GNAT) domain 47 140 2.8E-16 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS06335 ad426996964e209339444e1b0a42bbff 427 PANTHER PTHR30572 1 182 1.3E-67 T 23-04-2016 CLI_RS06335 ad426996964e209339444e1b0a42bbff 427 PANTHER PTHR30572 199 427 1.3E-67 T 23-04-2016 CLI_RS06335 ad426996964e209339444e1b0a42bbff 427 Pfam PF02687 FtsX-like permease family 297 419 5.9E-22 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS06335 ad426996964e209339444e1b0a42bbff 427 Pfam PF12704 MacB-like periplasmic core domain 21 267 2.3E-16 T 23-04-2016 IPR025857 MacB-like periplasmic core domain CLI_RS02005 41accd5d86ca3780bf1a7ce7f6d1b9c3 188 PANTHER PTHR38659:SF1 2 188 2.3E-116 T 23-04-2016 CLI_RS02005 41accd5d86ca3780bf1a7ce7f6d1b9c3 188 PANTHER PTHR38659 2 188 2.3E-116 T 23-04-2016 CLI_RS02005 41accd5d86ca3780bf1a7ce7f6d1b9c3 188 SMART SM00471 16 128 0.0054 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS02005 41accd5d86ca3780bf1a7ce7f6d1b9c3 188 SUPERFAMILY SSF109604 12 176 2.31E-18 T 23-04-2016 CLI_RS02005 41accd5d86ca3780bf1a7ce7f6d1b9c3 188 Pfam PF01966 HD domain 21 106 2.3E-6 T 23-04-2016 IPR006674 HD domain CLI_RS02005 41accd5d86ca3780bf1a7ce7f6d1b9c3 188 Gene3D G3DSA:1.10.3210.10 2 181 4.0E-29 T 23-04-2016 IPR006674 HD domain CLI_RS07040 c518a6d5696d4cf4691479a6c19e93c0 213 PIRSF PIRSF020269 1 213 1.0E-87 T 23-04-2016 IPR009501 Uncharacterised conserved protein UCP020269 CLI_RS07040 c518a6d5696d4cf4691479a6c19e93c0 213 PANTHER PTHR36179:SF2 1 213 2.3E-113 T 23-04-2016 CLI_RS07040 c518a6d5696d4cf4691479a6c19e93c0 213 Gene3D G3DSA:3.40.50.10420 12 154 1.3E-5 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CLI_RS07040 c518a6d5696d4cf4691479a6c19e93c0 213 SUPERFAMILY SSF100950 11 154 5.86E-5 T 23-04-2016 CLI_RS07040 c518a6d5696d4cf4691479a6c19e93c0 213 PANTHER PTHR36179 1 213 2.3E-113 T 23-04-2016 CLI_RS07040 c518a6d5696d4cf4691479a6c19e93c0 213 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 13 207 2.7E-58 T 23-04-2016 IPR003741 LUD domain CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 Pfam PF13306 Leucine rich repeats (6 copies) 1783 1909 4.5E-20 T 23-04-2016 IPR026906 Leucine rich repeat 5 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 Pfam PF13306 Leucine rich repeats (6 copies) 850 971 3.9E-27 T 23-04-2016 IPR026906 Leucine rich repeat 5 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 Pfam PF13306 Leucine rich repeats (6 copies) 605 727 2.7E-30 T 23-04-2016 IPR026906 Leucine rich repeat 5 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 Pfam PF13306 Leucine rich repeats (6 copies) 1409 1529 6.5E-24 T 23-04-2016 IPR026906 Leucine rich repeat 5 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 SUPERFAMILY SSF52058 848 999 8.26E-8 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 Gene3D G3DSA:3.80.10.10 1828 1894 3.7E-9 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 Gene3D G3DSA:3.80.10.10 1327 1469 3.7E-9 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 Gene3D G3DSA:3.80.10.10 878 997 3.7E-9 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017 1392 1528 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017 1044 1066 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017 1548 1561 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017 608 732 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017 1283 1370 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017 222 431 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017 1766 1909 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 Pfam PF07532 Bacterial Ig-like domain (group 4) 1152 1199 1.9E-4 T 23-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017:SF153 1392 1528 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017:SF153 1044 1066 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017:SF153 1548 1561 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017:SF153 608 732 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017:SF153 1283 1370 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017:SF153 222 431 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 PANTHER PTHR11017:SF153 1766 1909 0.0 T 23-04-2016 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 Pfam PF04122 Putative cell wall binding repeat 2 239 329 6.8E-14 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 Pfam PF04122 Putative cell wall binding repeat 2 39 123 2.6E-18 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02110 98a0f0530aba8a37d8af18008fd43f86 1945 Pfam PF04122 Putative cell wall binding repeat 2 137 227 2.9E-13 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS05320 245cbc52408be236a1e3ff4221fccdb9 232 Pfam PF03483 B3/4 domain 64 194 7.5E-25 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CLI_RS05320 245cbc52408be236a1e3ff4221fccdb9 232 SMART SM00873 61 215 5.5E-15 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CLI_RS05320 245cbc52408be236a1e3ff4221fccdb9 232 PANTHER PTHR39209:SF2 1 232 3.2E-113 T 23-04-2016 CLI_RS05320 245cbc52408be236a1e3ff4221fccdb9 232 Gene3D G3DSA:3.50.40.10 53 194 2.1E-19 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CLI_RS05320 245cbc52408be236a1e3ff4221fccdb9 232 SUPERFAMILY SSF56037 50 227 5.23E-30 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CLI_RS05320 245cbc52408be236a1e3ff4221fccdb9 232 PANTHER PTHR39209 1 232 3.2E-113 T 23-04-2016 CLI_RS11720 963d8f97af2332b446ed64e1a98a5065 135 Pfam PF10934 Protein of unknown function (DUF2634) 27 122 1.2E-32 T 23-04-2016 IPR020288 Protein of unknown function DUF2634 CLI_RS11720 963d8f97af2332b446ed64e1a98a5065 135 SUPERFAMILY SSF160719 39 124 2.09E-10 T 23-04-2016 CLI_RS11720 963d8f97af2332b446ed64e1a98a5065 135 Gene3D G3DSA:3.10.450.40 31 104 3.8E-7 T 23-04-2016 CLI_RS11720 963d8f97af2332b446ed64e1a98a5065 135 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 23 132 2.0E-27 T 23-04-2016 IPR020288 Protein of unknown function DUF2634 CLI_RS18960 902a8790ae3c576497903376e1f78c7b 298 PANTHER PTHR37303:SF1 2 96 1.1E-99 T 23-04-2016 CLI_RS18960 902a8790ae3c576497903376e1f78c7b 298 PANTHER PTHR37303 112 298 1.1E-99 T 23-04-2016 CLI_RS18960 902a8790ae3c576497903376e1f78c7b 298 PANTHER PTHR37303:SF1 112 298 1.1E-99 T 23-04-2016 CLI_RS18960 902a8790ae3c576497903376e1f78c7b 298 PANTHER PTHR37303 2 96 1.1E-99 T 23-04-2016 CLI_RS02470 e66c162a1b7ddc0617593acb675bc54f 471 Pfam PF04122 Putative cell wall binding repeat 2 132 217 8.2E-22 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02470 e66c162a1b7ddc0617593acb675bc54f 471 Pfam PF04122 Putative cell wall binding repeat 2 226 313 9.8E-18 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02470 e66c162a1b7ddc0617593acb675bc54f 471 Pfam PF04122 Putative cell wall binding repeat 2 33 119 4.1E-20 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02470 e66c162a1b7ddc0617593acb675bc54f 471 Pfam PF16800 IseA DL-endopeptidase inhibitor 323 466 1.2E-40 T 23-04-2016 IPR031841 DL-endopeptidase inhibitor IseA CLI_RS02470 e66c162a1b7ddc0617593acb675bc54f 471 PANTHER PTHR30032:SF1 1 466 6.4E-124 T 23-04-2016 CLI_RS02470 e66c162a1b7ddc0617593acb675bc54f 471 PANTHER PTHR30032 1 466 6.4E-124 T 23-04-2016 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 SUPERFAMILY SSF51055 396 447 2.75E-11 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 Pfam PF00704 Glycosyl hydrolases family 18 78 302 1.1E-9 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 Gene3D G3DSA:2.10.10.20 476 527 3.2E-14 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 Gene3D G3DSA:2.10.10.20 395 447 1.6E-15 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 SMART SM00495 478 522 1.0E-7 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 SMART SM00495 397 441 6.5E-9 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 SUPERFAMILY SSF51445 54 337 1.17E-21 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 Gene3D G3DSA:3.20.20.80 80 251 5.2E-13 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 Gene3D G3DSA:3.20.20.80 287 337 5.2E-13 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 PANTHER PTHR11177 34 375 2.9E-143 T 23-04-2016 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 PANTHER PTHR11177:SF203 34 375 2.9E-143 T 23-04-2016 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 SUPERFAMILY SSF51055 477 526 2.22E-10 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 Pfam PF02839 Carbohydrate binding domain 398 437 4.7E-9 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS05675 17ee92f423fddb0f68de28767c30b76d 527 Pfam PF02839 Carbohydrate binding domain 479 516 9.6E-9 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS01455 bb144a7e49267f0d7d53d04a2025e2a5 224 Pfam PF00072 Response regulator receiver domain 4 114 5.6E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01455 bb144a7e49267f0d7d53d04a2025e2a5 224 SMART SM00448 2 115 3.6E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS01455 bb144a7e49267f0d7d53d04a2025e2a5 224 Gene3D G3DSA:3.40.50.2300 3 128 9.2E-30 T 23-04-2016 CLI_RS01455 bb144a7e49267f0d7d53d04a2025e2a5 224 PANTHER PTHR26402:SF522 2 210 2.9E-46 T 23-04-2016 CLI_RS01455 bb144a7e49267f0d7d53d04a2025e2a5 224 PANTHER PTHR26402 2 210 2.9E-46 T 23-04-2016 CLI_RS01455 bb144a7e49267f0d7d53d04a2025e2a5 224 Gene3D G3DSA:1.10.10.10 165 207 1.0E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01455 bb144a7e49267f0d7d53d04a2025e2a5 224 SUPERFAMILY SSF46785 171 209 8.18E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01455 bb144a7e49267f0d7d53d04a2025e2a5 224 SUPERFAMILY SSF52172 3 133 3.7E-33 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS01455 bb144a7e49267f0d7d53d04a2025e2a5 224 Pfam PF08279 HTH domain 171 203 1.3E-5 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 CLI_RS01455 bb144a7e49267f0d7d53d04a2025e2a5 224 PIRSF PIRSF006171 1 224 5.5E-80 T 23-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CLI_RS12570 15800664c9bed5b51448a5fe45c789ca 72 PANTHER PTHR34476 6 69 4.7E-23 T 23-04-2016 CLI_RS12570 15800664c9bed5b51448a5fe45c789ca 72 SUPERFAMILY SSF63562 5 69 3.66E-24 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS12570 15800664c9bed5b51448a5fe45c789ca 72 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 5 62 1.0E-14 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS12570 15800664c9bed5b51448a5fe45c789ca 72 Gene3D G3DSA:3.90.940.10 5 69 1.5E-19 T 23-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS12570 15800664c9bed5b51448a5fe45c789ca 72 SMART SM01409 12 64 4.4E-15 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS12570 15800664c9bed5b51448a5fe45c789ca 72 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 5 65 15.571 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS12570 15800664c9bed5b51448a5fe45c789ca 72 Pfam PF01192 RNA polymerase Rpb6 13 64 6.8E-16 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLI_RS12700 85975af8f9cea115ce1c2b05855d5582 424 Pfam PF13641 Glycosyltransferase like family 2 49 271 1.8E-30 T 23-04-2016 CLI_RS12700 85975af8f9cea115ce1c2b05855d5582 424 PANTHER PTHR10859 34 399 1.7E-168 T 23-04-2016 CLI_RS12700 85975af8f9cea115ce1c2b05855d5582 424 PANTHER PTHR10859:SF96 34 399 1.7E-168 T 23-04-2016 CLI_RS12700 85975af8f9cea115ce1c2b05855d5582 424 Gene3D G3DSA:3.90.550.10 48 288 9.0E-17 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS12700 85975af8f9cea115ce1c2b05855d5582 424 SUPERFAMILY SSF53448 47 339 1.04E-46 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS06255 18b3dbe85fb8017fce1848aea222953e 290 Pfam PF00005 ABC transporter 19 156 2.2E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS06255 18b3dbe85fb8017fce1848aea222953e 290 SUPERFAMILY SSF52540 4 218 4.02E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06255 18b3dbe85fb8017fce1848aea222953e 290 PANTHER PTHR24220:SF500 5 288 1.1E-137 T 23-04-2016 CLI_RS06255 18b3dbe85fb8017fce1848aea222953e 290 PANTHER PTHR24220 5 288 1.1E-137 T 23-04-2016 CLI_RS06255 18b3dbe85fb8017fce1848aea222953e 290 SMART SM00382 28 206 2.5E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06255 18b3dbe85fb8017fce1848aea222953e 290 Gene3D G3DSA:3.40.50.300 3 218 4.0E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18190 6af666218eff27b70f0b53c6f1098e12 89 Pfam PF04977 Septum formation initiator 11 84 8.2E-20 T 23-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 CLI_RS05750 9e966a93455288b569de4a355dcbda39 502 PANTHER PTHR11203 1 467 1.2E-147 T 23-04-2016 CLI_RS05750 9e966a93455288b569de4a355dcbda39 502 PANTHER PTHR11203:SF11 1 467 1.2E-147 T 23-04-2016 CLI_RS05750 9e966a93455288b569de4a355dcbda39 502 SMART SM00849 13 225 4.5E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05750 9e966a93455288b569de4a355dcbda39 502 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 391 452 1.9E-14 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CLI_RS05750 9e966a93455288b569de4a355dcbda39 502 SMART SM01027 252 377 6.5E-60 T 23-04-2016 IPR022712 Beta-Casp domain CLI_RS05750 9e966a93455288b569de4a355dcbda39 502 Gene3D G3DSA:3.60.15.10 135 261 9.1E-51 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05750 9e966a93455288b569de4a355dcbda39 502 Gene3D G3DSA:3.60.15.10 1 99 9.1E-51 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05750 9e966a93455288b569de4a355dcbda39 502 Pfam PF10996 Beta-Casp domain 252 377 1.2E-29 T 23-04-2016 IPR022712 Beta-Casp domain CLI_RS05750 9e966a93455288b569de4a355dcbda39 502 Pfam PF00753 Metallo-beta-lactamase superfamily 11 72 2.1E-10 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05750 9e966a93455288b569de4a355dcbda39 502 SUPERFAMILY SSF56281 1 464 6.71E-130 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS01145 fd2c24936eb15c51c676fcb9584ea98c 552 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 291 486 4.1E-17 T 23-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 CLI_RS01145 fd2c24936eb15c51c676fcb9584ea98c 552 SUPERFAMILY SSF52540 284 484 2.22E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01145 fd2c24936eb15c51c676fcb9584ea98c 552 Gene3D G3DSA:3.30.980.10 69 157 8.0E-18 T 23-04-2016 CLI_RS01145 fd2c24936eb15c51c676fcb9584ea98c 552 PANTHER PTHR10285:SF45 200 492 1.0E-130 T 23-04-2016 CLI_RS01145 fd2c24936eb15c51c676fcb9584ea98c 552 SUPERFAMILY SSF55186 69 236 2.27E-34 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CLI_RS01145 fd2c24936eb15c51c676fcb9584ea98c 552 PANTHER PTHR10285 200 492 1.0E-130 T 23-04-2016 CLI_RS01145 fd2c24936eb15c51c676fcb9584ea98c 552 Gene3D G3DSA:3.40.50.300 269 486 1.1E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07940 55bda549219b1290074d3ea0aa672f20 141 PANTHER PTHR34821 4 138 9.5E-27 T 23-04-2016 CLI_RS07940 55bda549219b1290074d3ea0aa672f20 141 PANTHER PTHR34821:SF2 4 138 9.5E-27 T 23-04-2016 CLI_RS07940 55bda549219b1290074d3ea0aa672f20 141 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 137 6.8E-30 T 23-04-2016 IPR006750 Putative inner membrane exporter, YdcZ CLI_RS07210 74cf64112aa7abd65724465c827ce0a8 183 Pfam PF00881 Nitroreductase family 8 163 2.7E-34 T 23-04-2016 IPR029479 Nitroreductase CLI_RS07210 74cf64112aa7abd65724465c827ce0a8 183 Gene3D G3DSA:3.40.109.10 1 181 1.7E-47 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS07210 74cf64112aa7abd65724465c827ce0a8 183 SUPERFAMILY SSF55469 1 182 9.42E-46 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS07210 74cf64112aa7abd65724465c827ce0a8 183 PANTHER PTHR23026:SF105 1 182 1.4E-93 T 23-04-2016 CLI_RS07210 74cf64112aa7abd65724465c827ce0a8 183 PANTHER PTHR23026 1 182 1.4E-93 T 23-04-2016 CLI_RS08560 8522b5a7c0232d016ff8e609b2db707e 195 SUPERFAMILY SSF53098 2 190 3.62E-25 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS08560 8522b5a7c0232d016ff8e609b2db707e 195 PANTHER PTHR30231 4 156 6.1E-24 T 23-04-2016 CLI_RS08560 8522b5a7c0232d016ff8e609b2db707e 195 PANTHER PTHR30231 173 189 6.1E-24 T 23-04-2016 CLI_RS08560 8522b5a7c0232d016ff8e609b2db707e 195 SMART SM00479 2 195 3.1E-4 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS08560 8522b5a7c0232d016ff8e609b2db707e 195 Pfam PF00929 Exonuclease 4 141 2.6E-10 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS08560 8522b5a7c0232d016ff8e609b2db707e 195 Gene3D G3DSA:3.30.420.10 2 189 7.4E-29 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS03665 632a176af98de66aaa14d00f228c1bbc 130 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLI_RS03665 632a176af98de66aaa14d00f228c1bbc 130 PANTHER PTHR11715 1 130 5.4E-60 T 23-04-2016 IPR002930 Glycine cleavage system H-protein CLI_RS03665 632a176af98de66aaa14d00f228c1bbc 130 Pfam PF01597 Glycine cleavage H-protein 7 125 3.2E-42 T 23-04-2016 IPR002930 Glycine cleavage system H-protein CLI_RS03665 632a176af98de66aaa14d00f228c1bbc 130 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 5 125 6.0E-43 T 23-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 CLI_RS03665 632a176af98de66aaa14d00f228c1bbc 130 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 124 27.232 T 23-04-2016 IPR002930 Glycine cleavage system H-protein CLI_RS03665 632a176af98de66aaa14d00f228c1bbc 130 Gene3D G3DSA:2.40.50.100 6 125 7.0E-47 T 23-04-2016 CLI_RS03665 632a176af98de66aaa14d00f228c1bbc 130 SUPERFAMILY SSF51230 3 125 1.44E-40 T 23-04-2016 IPR011053 Single hybrid motif CLI_RS14665 b8d8dac617b0e2a4ebe9b1e0be1a9e20 232 SMART SM00014 133 228 1.5E-5 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS14665 b8d8dac617b0e2a4ebe9b1e0be1a9e20 232 PANTHER PTHR34299 1 158 7.7E-42 T 23-04-2016 CLI_RS14665 b8d8dac617b0e2a4ebe9b1e0be1a9e20 232 Pfam PF01219 Prokaryotic diacylglycerol kinase 11 112 1.1E-32 T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 CLI_RS14665 b8d8dac617b0e2a4ebe9b1e0be1a9e20 232 Gene3D G3DSA:1.10.3830.10 2 115 3.0E-38 T 23-04-2016 CLI_RS14665 b8d8dac617b0e2a4ebe9b1e0be1a9e20 232 Pfam PF01569 PAP2 superfamily 157 230 4.2E-11 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS14665 b8d8dac617b0e2a4ebe9b1e0be1a9e20 232 SUPERFAMILY SSF48317 42 231 1.31E-22 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS14665 b8d8dac617b0e2a4ebe9b1e0be1a9e20 232 PANTHER PTHR34299:SF1 1 158 7.7E-42 T 23-04-2016 CLI_RS14665 b8d8dac617b0e2a4ebe9b1e0be1a9e20 232 Gene3D G3DSA:1.20.144.10 116 230 1.0E-13 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS18710 c2762e8b4b5ff2c5123c1926ad217fa8 445 SMART SM00382 200 379 4.6E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS18710 c2762e8b4b5ff2c5123c1926ad217fa8 445 Pfam PF03796 DnaB-like helicase C terminal domain 183 438 4.4E-115 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 CLI_RS18710 c2762e8b4b5ff2c5123c1926ad217fa8 445 Pfam PF00772 DnaB-like helicase N terminal domain 8 109 8.7E-33 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CLI_RS18710 c2762e8b4b5ff2c5123c1926ad217fa8 445 SUPERFAMILY SSF52540 181 431 1.68E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18710 c2762e8b4b5ff2c5123c1926ad217fa8 445 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 8 439 2.2E-177 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CLI_RS18710 c2762e8b4b5ff2c5123c1926ad217fa8 445 PANTHER PTHR30153 5 445 2.7E-206 T 23-04-2016 CLI_RS18710 c2762e8b4b5ff2c5123c1926ad217fa8 445 Gene3D G3DSA:3.40.50.300 170 440 1.8E-107 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18710 c2762e8b4b5ff2c5123c1926ad217fa8 445 SUPERFAMILY SSF48024 6 118 7.85E-34 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CLI_RS18710 c2762e8b4b5ff2c5123c1926ad217fa8 445 Gene3D G3DSA:1.10.860.10 8 110 1.6E-33 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CLI_RS16885 7c107829a8c37bd8ad3b39b682453fe1 214 Pfam PF07314 Protein of unknown function (DUF1461) 12 186 7.5E-46 T 23-04-2016 IPR010178 Integral membrane protein 1906 CLI_RS16885 7c107829a8c37bd8ad3b39b682453fe1 214 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 12 213 5.0E-47 T 23-04-2016 IPR010178 Integral membrane protein 1906 CLI_RS01570 99e9cfd7f91084cfd3c0d0d590a941f7 259 SUPERFAMILY SSF46689 7 76 1.97E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS01570 99e9cfd7f91084cfd3c0d0d590a941f7 259 Gene3D G3DSA:1.10.10.10 8 76 1.1E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01570 99e9cfd7f91084cfd3c0d0d590a941f7 259 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 75 1.4E-15 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLI_RS01570 99e9cfd7f91084cfd3c0d0d590a941f7 259 Gene3D G3DSA:3.40.50.10490 87 253 7.7E-21 T 23-04-2016 CLI_RS01570 99e9cfd7f91084cfd3c0d0d590a941f7 259 Pfam PF01380 SIS domain 117 223 6.8E-12 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CLI_RS01570 99e9cfd7f91084cfd3c0d0d590a941f7 259 PANTHER PTHR30514 1 258 9.6E-73 T 23-04-2016 CLI_RS01570 99e9cfd7f91084cfd3c0d0d590a941f7 259 PANTHER PTHR30514:SF1 1 258 9.6E-73 T 23-04-2016 CLI_RS01570 99e9cfd7f91084cfd3c0d0d590a941f7 259 SUPERFAMILY SSF53697 87 252 1.56E-24 T 23-04-2016 CLI_RS12245 bfb111b6854609692ffd96907ae5e17c 363 Pfam PF13394 4Fe-4S single cluster domain 10 101 2.1E-6 T 23-04-2016 CLI_RS12245 bfb111b6854609692ffd96907ae5e17c 363 Pfam PF04055 Radical SAM superfamily 12 174 2.1E-22 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS12245 bfb111b6854609692ffd96907ae5e17c 363 SUPERFAMILY SSF102114 11 271 1.7E-55 T 23-04-2016 CLI_RS12245 bfb111b6854609692ffd96907ae5e17c 363 Gene3D G3DSA:3.80.30.20 13 213 2.9E-34 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS12245 bfb111b6854609692ffd96907ae5e17c 363 SMART SM00729 7 226 2.3E-41 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS12245 bfb111b6854609692ffd96907ae5e17c 363 Pfam PF16199 Radical_SAM C-terminal domain 187 272 5.3E-20 T 23-04-2016 IPR032432 Radical SAM, C-terminal extension CLI_RS12245 bfb111b6854609692ffd96907ae5e17c 363 PANTHER PTHR11135 6 269 5.6E-75 T 23-04-2016 CLI_RS14895 950b2905cee740750cdfa59387d4e9c6 261 Pfam PF01551 Peptidase family M23 158 252 1.4E-29 T 23-04-2016 IPR016047 Peptidase M23 CLI_RS14895 950b2905cee740750cdfa59387d4e9c6 261 PANTHER PTHR21666 131 256 1.9E-41 T 23-04-2016 CLI_RS14895 950b2905cee740750cdfa59387d4e9c6 261 Gene3D G3DSA:2.70.70.10 121 257 9.4E-48 T 23-04-2016 CLI_RS14895 950b2905cee740750cdfa59387d4e9c6 261 SUPERFAMILY SSF51261 75 255 4.32E-48 T 23-04-2016 IPR011055 Duplicated hybrid motif CLI_RS01355 aaf93f0f48e83af51fab391bbd1236bd 443 SUPERFAMILY SSF56176 4 198 2.85E-54 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLI_RS01355 aaf93f0f48e83af51fab391bbd1236bd 443 Pfam PF01565 FAD binding domain 33 163 1.2E-29 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CLI_RS01355 aaf93f0f48e83af51fab391bbd1236bd 443 Gene3D G3DSA:3.30.43.10 22 90 1.1E-12 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CLI_RS01355 aaf93f0f48e83af51fab391bbd1236bd 443 Gene3D G3DSA:3.30.465.10 91 198 1.4E-12 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLI_RS01355 aaf93f0f48e83af51fab391bbd1236bd 443 PANTHER PTHR11748 5 443 1.2E-191 T 23-04-2016 CLI_RS01355 aaf93f0f48e83af51fab391bbd1236bd 443 PANTHER PTHR11748:SF86 5 443 1.2E-191 T 23-04-2016 CLI_RS01355 aaf93f0f48e83af51fab391bbd1236bd 443 Pfam PF08031 Berberine and berberine like 392 435 7.5E-17 T 23-04-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 CLI_RS07020 db4e60e01094c1215fa2e9746cf46ba2 451 PANTHER PTHR30175 3 448 5.9E-218 T 23-04-2016 CLI_RS07020 db4e60e01094c1215fa2e9746cf46ba2 451 SUPERFAMILY SSF55604 7 83 3.4E-21 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS07020 db4e60e01094c1215fa2e9746cf46ba2 451 PANTHER PTHR30175:SF3 3 448 5.9E-218 T 23-04-2016 CLI_RS07020 db4e60e01094c1215fa2e9746cf46ba2 451 Gene3D G3DSA:3.30.1360.60 3 84 2.9E-26 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CLI_RS07020 db4e60e01094c1215fa2e9746cf46ba2 451 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS07020 db4e60e01094c1215fa2e9746cf46ba2 451 Pfam PF00367 phosphotransferase system, EIIB 9 39 1.7E-14 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CLI_RS07020 db4e60e01094c1215fa2e9746cf46ba2 451 Pfam PF02378 Phosphotransferase system, EIIC 121 392 1.9E-32 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLI_RS10190 29e005522db305313caf6a70e52b6872 383 PANTHER PTHR11751 5 383 4.8E-171 T 23-04-2016 CLI_RS10190 29e005522db305313caf6a70e52b6872 383 Gene3D G3DSA:3.40.640.10 46 270 1.5E-73 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS10190 29e005522db305313caf6a70e52b6872 383 Gene3D G3DSA:3.90.1150.10 271 382 3.4E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS10190 29e005522db305313caf6a70e52b6872 383 PANTHER PTHR11751:SF184 5 383 4.8E-171 T 23-04-2016 CLI_RS10190 29e005522db305313caf6a70e52b6872 383 SUPERFAMILY SSF53383 18 383 3.36E-104 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS10190 29e005522db305313caf6a70e52b6872 383 Pfam PF00155 Aminotransferase class I and II 30 379 1.0E-68 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS16800 a5ff02db191e583599d98bedf50ae0eb 334 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 228 244 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLI_RS16800 a5ff02db191e583599d98bedf50ae0eb 334 PANTHER PTHR10996:SF161 1 334 1.9E-128 T 23-04-2016 CLI_RS16800 a5ff02db191e583599d98bedf50ae0eb 334 PANTHER PTHR10996 1 334 1.9E-128 T 23-04-2016 CLI_RS16800 a5ff02db191e583599d98bedf50ae0eb 334 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 334 8.7E-26 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CLI_RS16800 a5ff02db191e583599d98bedf50ae0eb 334 SUPERFAMILY SSF51735 104 303 2.93E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16800 a5ff02db191e583599d98bedf50ae0eb 334 Gene3D G3DSA:3.40.50.720 117 302 2.9E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16800 a5ff02db191e583599d98bedf50ae0eb 334 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 177 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLI_RS16800 a5ff02db191e583599d98bedf50ae0eb 334 SUPERFAMILY SSF52283 2 137 8.13E-34 T 23-04-2016 CLI_RS16800 a5ff02db191e583599d98bedf50ae0eb 334 Gene3D G3DSA:3.40.50.720 1 116 2.5E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16800 a5ff02db191e583599d98bedf50ae0eb 334 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 302 5.9E-55 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLI_RS16800 a5ff02db191e583599d98bedf50ae0eb 334 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 199 221 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLI_RS07915 5f3c341cb6d96a14fd31292e5d23d76f 284 Gene3D G3DSA:1.10.3150.10 4 273 4.1E-77 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CLI_RS07915 5f3c341cb6d96a14fd31292e5d23d76f 284 PANTHER PTHR33525:SF3 1 284 6.6E-87 T 23-04-2016 CLI_RS07915 5f3c341cb6d96a14fd31292e5d23d76f 284 SUPERFAMILY SSF109604 5 276 9.6E-71 T 23-04-2016 CLI_RS07915 5f3c341cb6d96a14fd31292e5d23d76f 284 PANTHER PTHR33525 1 284 6.6E-87 T 23-04-2016 CLI_RS07915 5f3c341cb6d96a14fd31292e5d23d76f 284 TIGRFAM TIGR00277 HDIG: HDIG domain 116 212 4.3E-9 T 23-04-2016 IPR006675 HDIG domain CLI_RS07915 5f3c341cb6d96a14fd31292e5d23d76f 284 Pfam PF08668 HDOD domain 16 213 8.3E-63 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CLI_RS10515 5861f54a5f480543967591f493fdf814 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 85 3.2E-25 T 23-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CLI_RS10515 5861f54a5f480543967591f493fdf814 91 PANTHER PTHR33677 6 89 1.3E-22 T 23-04-2016 CLI_RS11735 60662bd4df2d9e976bd5106e2a242022 225 PANTHER PTHR34700 8 225 1.1E-74 T 23-04-2016 CLI_RS11735 60662bd4df2d9e976bd5106e2a242022 225 SMART SM00257 176 225 3.3E-7 T 23-04-2016 IPR018392 LysM domain CLI_RS11735 60662bd4df2d9e976bd5106e2a242022 225 PANTHER PTHR34700:SF2 8 225 1.1E-74 T 23-04-2016 CLI_RS11735 60662bd4df2d9e976bd5106e2a242022 225 Gene3D G3DSA:3.10.350.10 173 225 6.8E-11 T 23-04-2016 IPR018392 LysM domain CLI_RS11735 60662bd4df2d9e976bd5106e2a242022 225 Pfam PF01476 LysM domain 177 225 1.8E-9 T 23-04-2016 IPR018392 LysM domain CLI_RS11735 60662bd4df2d9e976bd5106e2a242022 225 SUPERFAMILY SSF54106 174 225 1.09E-8 T 23-04-2016 IPR018392 LysM domain CLI_RS11960 259cd3c2657e4bf0a421bc39dc66e81c 397 PANTHER PTHR11751 13 397 7.6E-175 T 23-04-2016 CLI_RS11960 259cd3c2657e4bf0a421bc39dc66e81c 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 197 220 7.6E-13 T 23-04-2016 CLI_RS11960 259cd3c2657e4bf0a421bc39dc66e81c 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 228 252 7.6E-13 T 23-04-2016 CLI_RS11960 259cd3c2657e4bf0a421bc39dc66e81c 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 114 135 7.6E-13 T 23-04-2016 CLI_RS11960 259cd3c2657e4bf0a421bc39dc66e81c 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 161 185 7.6E-13 T 23-04-2016 CLI_RS11960 259cd3c2657e4bf0a421bc39dc66e81c 397 SUPERFAMILY SSF53383 1 395 1.46E-116 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS11960 259cd3c2657e4bf0a421bc39dc66e81c 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 CLI_RS11960 259cd3c2657e4bf0a421bc39dc66e81c 397 Gene3D G3DSA:3.90.1150.10 274 396 2.8E-46 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS11960 259cd3c2657e4bf0a421bc39dc66e81c 397 Gene3D G3DSA:3.40.640.10 44 273 8.5E-80 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS11960 259cd3c2657e4bf0a421bc39dc66e81c 397 PANTHER PTHR11751:SF306 13 397 7.6E-175 T 23-04-2016 CLI_RS11960 259cd3c2657e4bf0a421bc39dc66e81c 397 Pfam PF00155 Aminotransferase class I and II 31 389 2.1E-73 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS07640 8031dfb86b6381928092ad2389b9f010 271 PIRSF PIRSF004846 1 270 1.1E-81 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 CLI_RS07640 8031dfb86b6381928092ad2389b9f010 271 Gene3D G3DSA:3.40.190.10 44 131 9.6E-22 T 23-04-2016 CLI_RS07640 8031dfb86b6381928092ad2389b9f010 271 Gene3D G3DSA:3.40.190.10 229 268 9.6E-22 T 23-04-2016 CLI_RS07640 8031dfb86b6381928092ad2389b9f010 271 SUPERFAMILY SSF53850 43 267 4.56E-70 T 23-04-2016 CLI_RS07640 8031dfb86b6381928092ad2389b9f010 271 Pfam PF13531 Bacterial extracellular solute-binding protein 44 266 9.2E-51 T 23-04-2016 CLI_RS07640 8031dfb86b6381928092ad2389b9f010 271 PANTHER PTHR30632 32 270 5.2E-74 T 23-04-2016 CLI_RS07640 8031dfb86b6381928092ad2389b9f010 271 PANTHER PTHR30632:SF0 32 270 5.2E-74 T 23-04-2016 CLI_RS07640 8031dfb86b6381928092ad2389b9f010 271 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 49 265 8.8E-70 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 CLI_RS07640 8031dfb86b6381928092ad2389b9f010 271 Gene3D G3DSA:3.40.190.10 132 228 4.4E-34 T 23-04-2016 CLI_RS13435 5c7c10c4113f6c9c42320c7795d2ea87 256 Pfam PF14393 Domain of unknown function (DUF4422) 4 225 1.4E-97 T 23-04-2016 IPR025536 Domain of unknown function DUF4422 CLI_RS06230 565157d86e9e6367355cea56b01a5756 313 SUPERFAMILY SSF53067 5 295 1.89E-45 T 23-04-2016 CLI_RS06230 565157d86e9e6367355cea56b01a5756 313 PANTHER PTHR18964 1 311 1.1E-172 T 23-04-2016 CLI_RS06230 565157d86e9e6367355cea56b01a5756 313 Gene3D G3DSA:3.30.420.40 105 296 4.5E-45 T 23-04-2016 CLI_RS06230 565157d86e9e6367355cea56b01a5756 313 Gene3D G3DSA:3.30.420.40 3 104 6.8E-32 T 23-04-2016 CLI_RS06230 565157d86e9e6367355cea56b01a5756 313 Pfam PF00480 ROK family 6 293 8.2E-39 T 23-04-2016 IPR000600 ROK family CLI_RS06230 565157d86e9e6367355cea56b01a5756 313 PANTHER PTHR18964:SF133 1 311 1.1E-172 T 23-04-2016 CLI_RS06775 4a2ba1adfd19eba488850bf352ba3398 264 Pfam PF02517 CAAX protease self-immunity 133 220 1.3E-19 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 CLI_RS06775 4a2ba1adfd19eba488850bf352ba3398 264 PANTHER PTHR10794 135 231 1.3E-23 T 23-04-2016 CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 Pfam PF00145 C-5 cytosine-specific DNA methylase 2 130 2.3E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 Pfam PF00145 C-5 cytosine-specific DNA methylase 293 525 7.3E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 Gene3D G3DSA:3.40.50.150 1 111 7.7E-58 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 Gene3D G3DSA:3.40.50.150 290 368 7.7E-58 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 69 81 - T 23-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 507 525 - T 23-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 PANTHER PTHR10629 2 123 4.5E-58 T 23-04-2016 CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 PANTHER PTHR10629 286 530 4.5E-58 T 23-04-2016 CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 PANTHER PTHR10629:SF32 2 123 4.5E-58 T 23-04-2016 CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 PANTHER PTHR10629:SF32 286 530 4.5E-58 T 23-04-2016 CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 3 19 1.9E-10 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 109 123 1.9E-10 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 4 126 2.3E-29 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 SUPERFAMILY SSF53335 405 526 1.36E-75 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 SUPERFAMILY SSF53335 294 378 1.36E-75 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 SUPERFAMILY SSF53335 1 127 1.36E-75 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 Gene3D G3DSA:3.90.120.10 471 513 3.5E-8 T 23-04-2016 CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 Gene3D G3DSA:3.90.120.10 112 150 3.5E-8 T 23-04-2016 CLI_RS10430 960367a31d5b1984cf191931e3dcac61 547 Gene3D G3DSA:3.90.120.10 194 195 3.5E-8 T 23-04-2016 CLI_RS14455 30c15575b735b3a2fb65ad435e21711d 450 PANTHER PTHR30330 1 449 0.0 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS14455 30c15575b735b3a2fb65ad435e21711d 450 Pfam PF01235 Sodium:alanine symporter family 56 448 2.7E-146 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS14455 30c15575b735b3a2fb65ad435e21711d 450 PANTHER PTHR30330:SF4 1 449 0.0 T 23-04-2016 CLI_RS14455 30c15575b735b3a2fb65ad435e21711d 450 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 94 109 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS14455 30c15575b735b3a2fb65ad435e21711d 450 PRINTS PR00175 Sodium/alanine symporter signature 184 202 2.5E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS14455 30c15575b735b3a2fb65ad435e21711d 450 PRINTS PR00175 Sodium/alanine symporter signature 94 116 2.5E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS14455 30c15575b735b3a2fb65ad435e21711d 450 PRINTS PR00175 Sodium/alanine symporter signature 351 373 2.5E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS14455 30c15575b735b3a2fb65ad435e21711d 450 PRINTS PR00175 Sodium/alanine symporter signature 212 231 2.5E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS14455 30c15575b735b3a2fb65ad435e21711d 450 PRINTS PR00175 Sodium/alanine symporter signature 410 430 2.5E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS14455 30c15575b735b3a2fb65ad435e21711d 450 PRINTS PR00175 Sodium/alanine symporter signature 307 325 2.5E-53 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS14455 30c15575b735b3a2fb65ad435e21711d 450 TIGRFAM TIGR00835 agcS: amino acid carrier protein 15 441 2.4E-147 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS04590 7864870d0922ed5b2b880a48ef5ec2d2 156 Pfam PF12821 Threonine/Serine exporter, ThrE 7 135 4.0E-32 T 23-04-2016 IPR024528 Threonine/Serine exporter, ThrE CLI_RS04590 7864870d0922ed5b2b880a48ef5ec2d2 156 PANTHER PTHR34390 1 156 9.3E-45 T 23-04-2016 CLI_RS08470 0baa437d76ab612d497ebf1c06f41a93 155 SUPERFAMILY SSF53187 1 40 6.91E-5 T 23-04-2016 CLI_RS08470 0baa437d76ab612d497ebf1c06f41a93 155 Gene3D G3DSA:3.40.630.40 1 40 0.001 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS08470 0baa437d76ab612d497ebf1c06f41a93 155 SUPERFAMILY SSF47090 80 148 1.05E-18 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS08470 0baa437d76ab612d497ebf1c06f41a93 155 Pfam PF01471 Putative peptidoglycan binding domain 90 147 1.7E-12 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS08470 0baa437d76ab612d497ebf1c06f41a93 155 Gene3D G3DSA:1.10.101.10 82 150 2.4E-20 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS14465 6e6f2f687b92074cc0c6a82ea8deefba 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 129 6.7E-14 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLI_RS14465 6e6f2f687b92074cc0c6a82ea8deefba 353 Pfam PF00107 Zinc-binding dehydrogenase 177 272 1.0E-17 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLI_RS14465 6e6f2f687b92074cc0c6a82ea8deefba 353 Gene3D G3DSA:3.90.180.10 1 209 6.7E-67 T 23-04-2016 IPR011032 GroES-like CLI_RS14465 6e6f2f687b92074cc0c6a82ea8deefba 353 SMART SM00829 7 350 6.5E-4 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CLI_RS14465 6e6f2f687b92074cc0c6a82ea8deefba 353 PANTHER PTHR11695 12 349 1.4E-90 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CLI_RS14465 6e6f2f687b92074cc0c6a82ea8deefba 353 SUPERFAMILY SSF50129 1 183 2.83E-50 T 23-04-2016 IPR011032 GroES-like CLI_RS14465 6e6f2f687b92074cc0c6a82ea8deefba 353 PANTHER PTHR11695:SF429 12 349 1.4E-90 T 23-04-2016 CLI_RS14465 6e6f2f687b92074cc0c6a82ea8deefba 353 SUPERFAMILY SSF51735 140 309 4.65E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS14465 6e6f2f687b92074cc0c6a82ea8deefba 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 CLI_RS13885 b979ca230038a04c7c17e3bf427877a0 196 PANTHER PTHR41778 1 196 3.5E-61 T 23-04-2016 CLI_RS13885 b979ca230038a04c7c17e3bf427877a0 196 PANTHER PTHR41778:SF1 1 196 3.5E-61 T 23-04-2016 CLI_RS05920 3b57ac7f5c4326075d6efd2e9f31ee87 166 Gene3D G3DSA:2.30.110.10 10 164 9.6E-36 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS05920 3b57ac7f5c4326075d6efd2e9f31ee87 166 PANTHER PTHR30466 5 128 2.0E-28 T 23-04-2016 CLI_RS05920 3b57ac7f5c4326075d6efd2e9f31ee87 166 PANTHER PTHR30466 146 164 2.0E-28 T 23-04-2016 CLI_RS05920 3b57ac7f5c4326075d6efd2e9f31ee87 166 Pfam PF01613 Flavin reductase like domain 32 163 3.5E-5 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 CLI_RS05920 3b57ac7f5c4326075d6efd2e9f31ee87 166 SUPERFAMILY SSF50475 8 164 2.55E-18 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS07885 fd3f87bd4631eb1722ee487ce36f9a05 370 Gene3D G3DSA:1.10.260.40 3 68 3.7E-21 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS07885 fd3f87bd4631eb1722ee487ce36f9a05 370 Pfam PF01381 Helix-turn-helix 10 64 2.0E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS07885 fd3f87bd4631eb1722ee487ce36f9a05 370 SUPERFAMILY SSF47413 4 68 6.14E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS07885 fd3f87bd4631eb1722ee487ce36f9a05 370 SMART SM00530 9 64 7.3E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS07885 fd3f87bd4631eb1722ee487ce36f9a05 370 SUPERFAMILY SSF48452 158 235 4.11E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS07885 fd3f87bd4631eb1722ee487ce36f9a05 370 SUPERFAMILY SSF48452 64 111 4.11E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS07885 fd3f87bd4631eb1722ee487ce36f9a05 370 Gene3D G3DSA:1.25.40.10 69 296 1.3E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS07885 fd3f87bd4631eb1722ee487ce36f9a05 370 PANTHER PTHR10245:SF46 1 278 7.3E-67 T 23-04-2016 CLI_RS07885 fd3f87bd4631eb1722ee487ce36f9a05 370 PANTHER PTHR10245 1 278 7.3E-67 T 23-04-2016 CLI_RS03310 880f3fbfdc0db1a2e589fa269afa738c 392 Gene3D G3DSA:3.40.50.150 103 377 3.4E-95 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS03310 880f3fbfdc0db1a2e589fa269afa738c 392 PIRSF PIRSF003085 2 392 1.1E-124 T 23-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CLI_RS03310 880f3fbfdc0db1a2e589fa269afa738c 392 SUPERFAMILY SSF53335 3 331 2.71E-80 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS03310 880f3fbfdc0db1a2e589fa269afa738c 392 PANTHER PTHR10108:SF743 309 392 8.3E-147 T 23-04-2016 CLI_RS03310 880f3fbfdc0db1a2e589fa269afa738c 392 PANTHER PTHR10108:SF743 103 292 8.3E-147 T 23-04-2016 CLI_RS03310 880f3fbfdc0db1a2e589fa269afa738c 392 PANTHER PTHR10108 309 392 8.3E-147 T 23-04-2016 CLI_RS03310 880f3fbfdc0db1a2e589fa269afa738c 392 PANTHER PTHR10108 103 292 8.3E-147 T 23-04-2016 CLI_RS03310 880f3fbfdc0db1a2e589fa269afa738c 392 Pfam PF02353 Mycolic acid cyclopropane synthetase 105 373 3.0E-100 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS03710 187dfa014b769999b1876f2f40ce6b8b 151 Pfam PF13302 Acetyltransferase (GNAT) domain 30 135 6.8E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS03710 187dfa014b769999b1876f2f40ce6b8b 151 Gene3D G3DSA:3.40.630.30 45 136 5.4E-8 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03710 187dfa014b769999b1876f2f40ce6b8b 151 SUPERFAMILY SSF55729 32 136 6.46E-10 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS18495 af54a38b72756df5451acc91661b2fa2 225 SMART SM00481 3 70 8.8E-9 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLI_RS18495 af54a38b72756df5451acc91661b2fa2 225 Pfam PF02811 PHP domain 4 97 3.5E-9 T 23-04-2016 IPR004013 PHP domain GO:0003824 CLI_RS18495 af54a38b72756df5451acc91661b2fa2 225 SUPERFAMILY SSF89550 1 196 1.7E-40 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CLI_RS18495 af54a38b72756df5451acc91661b2fa2 225 Pfam PF13263 PHP-associated 139 193 2.6E-17 T 23-04-2016 CLI_RS18495 af54a38b72756df5451acc91661b2fa2 225 Gene3D G3DSA:3.20.20.140 1 176 1.0E-24 T 23-04-2016 CLI_RS05045 616874c300dfd775f27a504306305a78 173 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 4 172 8.9E-62 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 CLI_RS05045 616874c300dfd775f27a504306305a78 173 Gene3D G3DSA:3.40.50.300 2 172 2.3E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05045 616874c300dfd775f27a504306305a78 173 PANTHER PTHR30069 3 172 1.7E-54 T 23-04-2016 CLI_RS05045 616874c300dfd775f27a504306305a78 173 PIRSF PIRSF015617 1 173 3.9E-63 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 CLI_RS05045 616874c300dfd775f27a504306305a78 173 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 2 172 2.5E-51 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 CLI_RS05045 616874c300dfd775f27a504306305a78 173 SUPERFAMILY SSF52540 2 172 7.21E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 322 1.0E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 299 1.0E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 341 1.0E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 285 1.0E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 Pfam PF00512 His Kinase A (phospho-acceptor) domain 125 189 1.0E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 SMART SM00387 234 342 2.2E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 SMART SM00304 70 123 7.6E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 SUPERFAMILY SSF158472 72 120 1.57E-9 T 23-04-2016 CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 PANTHER PTHR24423 75 342 2.1E-94 T 23-04-2016 CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 PANTHER PTHR24423:SF359 75 342 2.1E-94 T 23-04-2016 CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 SMART SM00388 124 190 3.6E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 Gene3D G3DSA:1.10.287.130 116 184 6.0E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 SUPERFAMILY SSF55874 180 342 2.62E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 Gene3D G3DSA:3.30.565.10 197 341 1.4E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 SUPERFAMILY SSF47384 107 191 3.53E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 341 9.2E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04785 a40e5d3bc759180b2396235c6576dfc5 342 Pfam PF00672 HAMP domain 50 118 1.3E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS11365 24a4516cccd436b6e589c5472e15ea5b 193 SUPERFAMILY SSF52218 1 188 1.12E-35 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS11365 24a4516cccd436b6e589c5472e15ea5b 193 Pfam PF03358 NADPH-dependent FMN reductase 1 132 4.5E-23 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLI_RS11365 24a4516cccd436b6e589c5472e15ea5b 193 PANTHER PTHR10204 1 193 8.4E-73 T 23-04-2016 CLI_RS11365 24a4516cccd436b6e589c5472e15ea5b 193 Gene3D G3DSA:3.40.50.360 1 189 8.3E-39 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS11365 24a4516cccd436b6e589c5472e15ea5b 193 PANTHER PTHR10204:SF38 1 193 8.4E-73 T 23-04-2016 CLI_RS03750 f74ec8b5978ec58daa5075b54c31f897 227 SUPERFAMILY SSF52540 3 225 1.15E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03750 f74ec8b5978ec58daa5075b54c31f897 227 Pfam PF00005 ABC transporter 23 169 2.1E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03750 f74ec8b5978ec58daa5075b54c31f897 227 PANTHER PTHR24220:SF86 5 227 1.5E-98 T 23-04-2016 CLI_RS03750 f74ec8b5978ec58daa5075b54c31f897 227 PANTHER PTHR24220 5 227 1.5E-98 T 23-04-2016 CLI_RS03750 f74ec8b5978ec58daa5075b54c31f897 227 SMART SM00382 32 219 2.1E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03750 f74ec8b5978ec58daa5075b54c31f897 227 Gene3D G3DSA:3.40.50.300 2 224 1.2E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03750 f74ec8b5978ec58daa5075b54c31f897 227 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS06415 40fdd1e9cdfc82282394213c6e8d9c0a 48 Pfam PF09388 Spo0E like sporulation regulatory protein 6 43 3.8E-10 T 23-04-2016 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 CLI_RS06415 40fdd1e9cdfc82282394213c6e8d9c0a 48 SUPERFAMILY SSF140500 3 44 6.15E-9 T 23-04-2016 CLI_RS18330 2cca646c2ae66058082b6560db277abd 298 PANTHER PTHR30352:SF7 1 281 1.6E-138 T 23-04-2016 CLI_RS18330 2cca646c2ae66058082b6560db277abd 298 Pfam PF04055 Radical SAM superfamily 56 224 1.2E-11 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS18330 2cca646c2ae66058082b6560db277abd 298 SUPERFAMILY SSF102114 60 188 8.04E-12 T 23-04-2016 CLI_RS18330 2cca646c2ae66058082b6560db277abd 298 Gene3D G3DSA:3.20.20.70 252 272 2.2E-12 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS18330 2cca646c2ae66058082b6560db277abd 298 Gene3D G3DSA:3.20.20.70 59 212 2.2E-12 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS18330 2cca646c2ae66058082b6560db277abd 298 PANTHER PTHR30352 1 281 1.6E-138 T 23-04-2016 CLI_RS18330 2cca646c2ae66058082b6560db277abd 298 PIRSF PIRSF004869 1 291 4.7E-77 T 23-04-2016 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted CLI_RS18330 2cca646c2ae66058082b6560db277abd 298 Pfam PF13353 4Fe-4S single cluster domain 55 152 8.0E-6 T 23-04-2016 CLI_RS08785 be8516f6f89a8ade6f96ef9812ac918c 396 Gene3D G3DSA:3.90.1150.10 276 396 6.3E-14 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS08785 be8516f6f89a8ade6f96ef9812ac918c 396 Gene3D G3DSA:3.40.640.10 56 275 2.7E-80 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS08785 be8516f6f89a8ade6f96ef9812ac918c 396 PANTHER PTHR11751:SF357 3 393 1.7E-225 T 23-04-2016 CLI_RS08785 be8516f6f89a8ade6f96ef9812ac918c 396 PANTHER PTHR11751 3 393 1.7E-225 T 23-04-2016 CLI_RS08785 be8516f6f89a8ade6f96ef9812ac918c 396 Pfam PF00155 Aminotransferase class I and II 50 387 2.3E-39 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS08785 be8516f6f89a8ade6f96ef9812ac918c 396 SUPERFAMILY SSF53383 2 395 6.46E-112 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS08675 0a3eb35bf20c4efc514eff88e625b18c 278 Gene3D G3DSA:2.40.50.140 144 217 1.3E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08675 0a3eb35bf20c4efc514eff88e625b18c 278 SMART SM00316 145 208 4.9E-11 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS08675 0a3eb35bf20c4efc514eff88e625b18c 278 SMART SM00316 3 67 4.5 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS08675 0a3eb35bf20c4efc514eff88e625b18c 278 SMART SM00316 72 133 32.0 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS08675 0a3eb35bf20c4efc514eff88e625b18c 278 PIRSF PIRSF012524 1 278 3.6E-75 T 23-04-2016 IPR014464 Conserved virulence factor B CLI_RS08675 0a3eb35bf20c4efc514eff88e625b18c 278 Pfam PF13509 S1 domain 73 132 1.6E-9 T 23-04-2016 CLI_RS08675 0a3eb35bf20c4efc514eff88e625b18c 278 Pfam PF13509 S1 domain 4 66 4.4E-22 T 23-04-2016 CLI_RS08675 0a3eb35bf20c4efc514eff88e625b18c 278 SUPERFAMILY SSF50249 143 214 7.31E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08675 0a3eb35bf20c4efc514eff88e625b18c 278 Pfam PF00575 S1 RNA binding domain 145 208 5.2E-7 T 23-04-2016 IPR003029 S1 domain GO:0003676 CLI_RS08675 0a3eb35bf20c4efc514eff88e625b18c 278 PANTHER PTHR37296 1 277 9.7E-114 T 23-04-2016 CLI_RS02100 60535736a653d4c67d5de65a2e6d8a42 673 Pfam PF04122 Putative cell wall binding repeat 2 231 318 4.6E-18 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02100 60535736a653d4c67d5de65a2e6d8a42 673 Pfam PF04122 Putative cell wall binding repeat 2 38 124 1.9E-19 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02100 60535736a653d4c67d5de65a2e6d8a42 673 Pfam PF04122 Putative cell wall binding repeat 2 137 222 7.3E-20 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02100 60535736a653d4c67d5de65a2e6d8a42 673 SUPERFAMILY SSF89260 442 538 3.4E-10 T 23-04-2016 CLI_RS02100 60535736a653d4c67d5de65a2e6d8a42 673 PANTHER PTHR30032:SF1 382 612 4.9E-164 T 23-04-2016 CLI_RS02100 60535736a653d4c67d5de65a2e6d8a42 673 PANTHER PTHR30032:SF1 4 288 4.9E-164 T 23-04-2016 CLI_RS02100 60535736a653d4c67d5de65a2e6d8a42 673 SUPERFAMILY SSF89260 562 659 1.19E-10 T 23-04-2016 CLI_RS02100 60535736a653d4c67d5de65a2e6d8a42 673 Gene3D G3DSA:2.60.120.380 353 433 4.2E-11 T 23-04-2016 CLI_RS02100 60535736a653d4c67d5de65a2e6d8a42 673 Gene3D G3DSA:2.60.120.380 437 554 1.9E-23 T 23-04-2016 CLI_RS02100 60535736a653d4c67d5de65a2e6d8a42 673 Gene3D G3DSA:2.60.120.380 559 671 5.0E-22 T 23-04-2016 CLI_RS02100 60535736a653d4c67d5de65a2e6d8a42 673 PANTHER PTHR30032 382 612 4.9E-164 T 23-04-2016 CLI_RS02100 60535736a653d4c67d5de65a2e6d8a42 673 PANTHER PTHR30032 4 288 4.9E-164 T 23-04-2016 CLI_RS17945 6f54a590b896265ab433e91756bf2e62 257 SMART SM00967 15 90 5.4E-22 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CLI_RS17945 6f54a590b896265ab433e91756bf2e62 257 Pfam PF00588 SpoU rRNA Methylase family 107 247 7.0E-40 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CLI_RS17945 6f54a590b896265ab433e91756bf2e62 257 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 14 253 9.1E-81 T 23-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 CLI_RS17945 6f54a590b896265ab433e91756bf2e62 257 PANTHER PTHR12029 7 254 1.5E-85 T 23-04-2016 CLI_RS17945 6f54a590b896265ab433e91756bf2e62 257 Gene3D G3DSA:3.40.1280.10 100 255 1.6E-51 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLI_RS17945 6f54a590b896265ab433e91756bf2e62 257 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 15 89 2.5E-22 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CLI_RS17945 6f54a590b896265ab433e91756bf2e62 257 SUPERFAMILY SSF55315 13 87 1.79E-17 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CLI_RS17945 6f54a590b896265ab433e91756bf2e62 257 SUPERFAMILY SSF75217 78 254 1.9E-48 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CLI_RS17945 6f54a590b896265ab433e91756bf2e62 257 Gene3D G3DSA:3.30.1330.30 10 86 3.6E-23 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CLI_RS14165 342fb06a3d42894dfbe78f49226d88dd 189 Gene3D G3DSA:3.90.550.10 1 182 3.2E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS14165 342fb06a3d42894dfbe78f49226d88dd 189 SUPERFAMILY SSF53448 4 184 5.86E-26 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS14165 342fb06a3d42894dfbe78f49226d88dd 189 Pfam PF12804 MobA-like NTP transferase domain 5 144 1.7E-26 T 23-04-2016 IPR025877 MobA-like NTP transferase CLI_RS14165 342fb06a3d42894dfbe78f49226d88dd 189 PANTHER PTHR19136:SF78 2 187 5.6E-49 T 23-04-2016 CLI_RS14165 342fb06a3d42894dfbe78f49226d88dd 189 PANTHER PTHR19136 2 187 5.6E-49 T 23-04-2016 CLI_RS14790 49c86dc69d6962066108d6e07a2b487e 504 Pfam PF07556 Protein of unknown function (DUF1538) 271 482 7.6E-70 T 23-04-2016 IPR011435 Protein of unknown function DUF1538 CLI_RS14790 49c86dc69d6962066108d6e07a2b487e 504 Pfam PF07556 Protein of unknown function (DUF1538) 18 228 4.8E-60 T 23-04-2016 IPR011435 Protein of unknown function DUF1538 CLI_RS08895 16c52d3dba42b959c0b671c921c9ea6a 114 SUPERFAMILY SSF69118 6 112 6.67E-30 T 23-04-2016 IPR029032 AhpD-like CLI_RS08895 16c52d3dba42b959c0b671c921c9ea6a 114 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 104 6.8E-22 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CLI_RS08895 16c52d3dba42b959c0b671c921c9ea6a 114 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 85 1.1E-15 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CLI_RS08895 16c52d3dba42b959c0b671c921c9ea6a 114 Gene3D G3DSA:1.20.1290.10 5 113 4.2E-35 T 23-04-2016 IPR029032 AhpD-like CLI_RS08895 16c52d3dba42b959c0b671c921c9ea6a 114 PANTHER PTHR33930:SF2 1 114 6.3E-35 T 23-04-2016 CLI_RS08895 16c52d3dba42b959c0b671c921c9ea6a 114 PANTHER PTHR33930 1 114 6.3E-35 T 23-04-2016 CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 SUPERFAMILY SSF52540 233 326 4.28E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 SUPERFAMILY SSF52540 52 202 4.28E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 171 186 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 Gene3D G3DSA:3.40.50.300 63 252 6.4E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 PANTHER PTHR10046:SF53 180 538 8.6E-169 T 23-04-2016 IPR033141 LonB/LonC peptidase CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 91 262 1.4E-19 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 Gene3D G3DSA:3.30.230.10 347 532 2.9E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 5 532 7.5E-274 T 23-04-2016 IPR014251 Sporulation protease LonB CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 PANTHER PTHR10046 180 538 8.6E-169 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 Gene3D G3DSA:1.10.8.60 253 325 2.3E-6 T 23-04-2016 CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 345 533 2.6E-34 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 SUPERFAMILY SSF54211 348 531 6.45E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 SMART SM00382 87 265 1.2E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 439 458 1.5E-31 T 23-04-2016 CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 1.5E-31 T 23-04-2016 CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 350 366 1.5E-31 T 23-04-2016 CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 469 488 1.5E-31 T 23-04-2016 CLI_RS16435 7e5485a121e12f3ae51533741be55a7c 559 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 95 114 1.5E-31 T 23-04-2016 CLI_RS06475 92495bcc607e3e17518716ca844a0089 67 SUPERFAMILY SSF47413 1 66 4.56E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS06475 92495bcc607e3e17518716ca844a0089 67 Pfam PF01381 Helix-turn-helix 17 60 9.1E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS06475 92495bcc607e3e17518716ca844a0089 67 Gene3D G3DSA:1.10.260.40 3 66 3.5E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS06475 92495bcc607e3e17518716ca844a0089 67 SMART SM00530 6 62 3.8E-7 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS12815 a198e6b9aac2222cdb368dca3293f66c 84 PANTHER PTHR40066:SF1 1 84 5.9E-29 T 23-04-2016 CLI_RS12815 a198e6b9aac2222cdb368dca3293f66c 84 Hamap MF_01448 UPF0473 protein . 4 83 14.231 T 23-04-2016 IPR009711 Uncharacterised protein family UPF0473 CLI_RS12815 a198e6b9aac2222cdb368dca3293f66c 84 PANTHER PTHR40066 1 84 5.9E-29 T 23-04-2016 CLI_RS12815 a198e6b9aac2222cdb368dca3293f66c 84 Pfam PF06949 Protein of unknown function (DUF1292) 13 81 7.9E-17 T 23-04-2016 IPR009711 Uncharacterised protein family UPF0473 CLI_RS12520 3abef01a0c3fe75def6fcc751776238e 292 Pfam PF16745 RsgA N-terminal domain 2 57 6.3E-21 T 23-04-2016 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal CLI_RS12520 3abef01a0c3fe75def6fcc751776238e 292 PANTHER PTHR32120:SF2 1 292 5.9E-122 T 23-04-2016 CLI_RS12520 3abef01a0c3fe75def6fcc751776238e 292 Pfam PF03193 Protein of unknown function, DUF258 60 223 3.4E-58 T 23-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 CLI_RS12520 3abef01a0c3fe75def6fcc751776238e 292 Gene3D G3DSA:3.40.50.300 64 222 1.5E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12520 3abef01a0c3fe75def6fcc751776238e 292 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 1 288 37.666 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 CLI_RS12520 3abef01a0c3fe75def6fcc751776238e 292 Gene3D G3DSA:2.40.50.140 1 62 1.5E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12520 3abef01a0c3fe75def6fcc751776238e 292 SUPERFAMILY SSF52540 66 284 4.91E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12520 3abef01a0c3fe75def6fcc751776238e 292 Gene3D G3DSA:1.10.40.50 226 290 1.0E-22 T 23-04-2016 CLI_RS12520 3abef01a0c3fe75def6fcc751776238e 292 SUPERFAMILY SSF50249 1 64 2.51E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12520 3abef01a0c3fe75def6fcc751776238e 292 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 40 281 8.4E-76 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 CLI_RS12520 3abef01a0c3fe75def6fcc751776238e 292 PANTHER PTHR32120 1 292 5.9E-122 T 23-04-2016 CLI_RS14305 5d69ff5902f38ab463fa124db08ee4fa 364 PANTHER PTHR35789 1 359 1.9E-33 T 23-04-2016 CLI_RS14305 5d69ff5902f38ab463fa124db08ee4fa 364 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 360 3.7E-76 T 23-04-2016 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLI_RS14305 5d69ff5902f38ab463fa124db08ee4fa 364 PANTHER PTHR35789:SF1 1 359 1.9E-33 T 23-04-2016 CLI_RS14305 5d69ff5902f38ab463fa124db08ee4fa 364 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 202 358 3.6E-21 T 23-04-2016 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLI_RS01740 e532d0ebcd3af81b6f54a26bbb701a94 442 PANTHER PTHR11206:SF107 2 436 5.8E-188 T 23-04-2016 CLI_RS01740 e532d0ebcd3af81b6f54a26bbb701a94 442 PIRSF PIRSF006603 1 442 1.5E-93 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS01740 e532d0ebcd3af81b6f54a26bbb701a94 442 Pfam PF01554 MatE 244 403 4.1E-24 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS01740 e532d0ebcd3af81b6f54a26bbb701a94 442 Pfam PF01554 MatE 20 180 1.2E-33 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS01740 e532d0ebcd3af81b6f54a26bbb701a94 442 PANTHER PTHR11206 2 436 5.8E-188 T 23-04-2016 CLI_RS01740 e532d0ebcd3af81b6f54a26bbb701a94 442 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 415 2.4E-64 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS00235 3a35209ff834fc6ab78396c87bf520b0 369 Gene3D G3DSA:1.20.1250.20 12 177 1.7E-21 T 23-04-2016 CLI_RS00235 3a35209ff834fc6ab78396c87bf520b0 369 SUPERFAMILY SSF103473 6 367 7.98E-46 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS00235 3a35209ff834fc6ab78396c87bf520b0 369 PANTHER PTHR23514 3 367 6.7E-80 T 23-04-2016 CLI_RS00235 3a35209ff834fc6ab78396c87bf520b0 369 Gene3D G3DSA:1.20.1250.20 182 362 9.0E-15 T 23-04-2016 CLI_RS00235 3a35209ff834fc6ab78396c87bf520b0 369 Pfam PF07690 Major Facilitator Superfamily 10 305 3.0E-27 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS00235 3a35209ff834fc6ab78396c87bf520b0 369 PANTHER PTHR23514:SF7 3 367 6.7E-80 T 23-04-2016 CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 Gene3D G3DSA:3.30.1360.120 1 128 6.1E-44 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 461 7.1E-128 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 127 1.7E-40 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 Gene3D G3DSA:3.40.50.300 293 391 1.3E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 Pfam PF01926 50S ribosome-binding GTPase 226 338 8.0E-28 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 PANTHER PTHR11649:SF56 8 461 5.3E-163 T 23-04-2016 CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 Gene3D G3DSA:3.40.50.300 200 254 1.5E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 461 35.261 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 Gene3D G3DSA:1.20.120.430 129 189 6.4E-53 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 Gene3D G3DSA:1.20.120.430 392 461 6.4E-53 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 Gene3D G3DSA:1.20.120.430 255 278 6.4E-53 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 SUPERFAMILY SSF52540 195 378 2.07E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 SUPERFAMILY SSF52540 81 159 2.07E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 Pfam PF12631 MnmE helical domain 130 458 2.2E-59 T 23-04-2016 IPR025867 MnmE, helical domain CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 225 378 9.9E-28 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 PANTHER PTHR11649 8 461 5.3E-163 T 23-04-2016 CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 SUPERFAMILY SSF116878 128 227 7.19E-49 T 23-04-2016 CLI_RS18825 32f822d15845008a0ae180fe6124f88e 461 SUPERFAMILY SSF116878 386 461 7.19E-49 T 23-04-2016 CLI_RS10155 6f38859995ce3e685df786f9169da316 182 PANTHER PTHR10799:SF660 50 180 3.4E-15 T 23-04-2016 CLI_RS10155 6f38859995ce3e685df786f9169da316 182 PANTHER PTHR10799 50 180 3.4E-15 T 23-04-2016 CLI_RS10155 6f38859995ce3e685df786f9169da316 182 Pfam PF00990 Diguanylate cyclase, GGDEF domain 32 180 3.5E-34 T 23-04-2016 IPR000160 GGDEF domain CLI_RS10155 6f38859995ce3e685df786f9169da316 182 SUPERFAMILY SSF55073 35 179 2.88E-34 T 23-04-2016 IPR029787 Nucleotide cyclase CLI_RS10155 6f38859995ce3e685df786f9169da316 182 SMART SM00267 8 182 4.4E-26 T 23-04-2016 IPR000160 GGDEF domain CLI_RS10155 6f38859995ce3e685df786f9169da316 182 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 31 179 1.3E-35 T 23-04-2016 IPR000160 GGDEF domain CLI_RS10155 6f38859995ce3e685df786f9169da316 182 Gene3D G3DSA:3.30.70.270 32 180 6.6E-37 T 23-04-2016 CLI_RS06040 5603812b88f284e1bf538d955c97ffbc 301 Pfam PF02653 Branched-chain amino acid transport system / permease component 4 267 4.3E-29 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLI_RS06040 5603812b88f284e1bf538d955c97ffbc 301 PANTHER PTHR32196 4 292 9.9E-148 T 23-04-2016 CLI_RS06040 5603812b88f284e1bf538d955c97ffbc 301 PANTHER PTHR32196:SF27 4 292 9.9E-148 T 23-04-2016 CLI_RS05690 1a2a5801552c24b7d411b7632b0453f5 213 PANTHER PTHR30450:SF1 1 213 1.4E-113 T 23-04-2016 CLI_RS05690 1a2a5801552c24b7d411b7632b0453f5 213 PANTHER PTHR30450 1 213 1.4E-113 T 23-04-2016 CLI_RS05690 1a2a5801552c24b7d411b7632b0453f5 213 Gene3D G3DSA:1.10.3720.10 4 212 5.9E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS05690 1a2a5801552c24b7d411b7632b0453f5 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 212 4.8E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS05690 1a2a5801552c24b7d411b7632b0453f5 213 SUPERFAMILY SSF161098 4 199 4.97E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS12865 31910b26605f1dd22111a54209e08362 255 Pfam PF02811 PHP domain 3 166 8.8E-7 T 23-04-2016 IPR004013 PHP domain GO:0003824 CLI_RS12865 31910b26605f1dd22111a54209e08362 255 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 2 229 3.6E-33 T 23-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 CLI_RS12865 31910b26605f1dd22111a54209e08362 255 Gene3D G3DSA:3.20.20.140 2 253 2.7E-28 T 23-04-2016 CLI_RS12865 31910b26605f1dd22111a54209e08362 255 PANTHER PTHR21039 1 253 6.5E-65 T 23-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 CLI_RS12865 31910b26605f1dd22111a54209e08362 255 SUPERFAMILY SSF89550 1 252 4.71E-36 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CLI_RS15440 16903a5d74e64ad288f4139a435bd7b4 408 Pfam PF00534 Glycosyl transferases group 1 218 383 8.5E-19 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CLI_RS15440 16903a5d74e64ad288f4139a435bd7b4 408 PANTHER PTHR12526:SF320 1 79 8.6E-50 T 23-04-2016 CLI_RS15440 16903a5d74e64ad288f4139a435bd7b4 408 PANTHER PTHR12526:SF320 104 407 8.6E-50 T 23-04-2016 CLI_RS15440 16903a5d74e64ad288f4139a435bd7b4 408 Gene3D G3DSA:3.40.50.2000 190 382 1.7E-17 T 23-04-2016 CLI_RS15440 16903a5d74e64ad288f4139a435bd7b4 408 Pfam PF13439 Glycosyltransferase Family 4 19 205 3.8E-13 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLI_RS15440 16903a5d74e64ad288f4139a435bd7b4 408 SUPERFAMILY SSF53756 2 405 2.88E-54 T 23-04-2016 CLI_RS15440 16903a5d74e64ad288f4139a435bd7b4 408 PANTHER PTHR12526 1 79 8.6E-50 T 23-04-2016 CLI_RS15440 16903a5d74e64ad288f4139a435bd7b4 408 PANTHER PTHR12526 104 407 8.6E-50 T 23-04-2016 CLI_RS07080 241da413b3eec25a56ec1f156fc332ad 266 SUPERFAMILY SSF161098 61 250 8.37E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07080 241da413b3eec25a56ec1f156fc332ad 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 261 6.9E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07080 241da413b3eec25a56ec1f156fc332ad 266 Gene3D G3DSA:1.10.3720.10 56 263 1.9E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07080 241da413b3eec25a56ec1f156fc332ad 266 PANTHER PTHR30465:SF2 10 264 3.0E-99 T 23-04-2016 CLI_RS07080 241da413b3eec25a56ec1f156fc332ad 266 PANTHER PTHR30465 10 264 3.0E-99 T 23-04-2016 CLI_RS14965 0d248239f19967933f1e05320d8b0174 184 SUPERFAMILY SSF54506 2 134 6.54E-24 T 23-04-2016 CLI_RS14965 0d248239f19967933f1e05320d8b0174 184 Gene3D G3DSA:3.10.310.10 1 116 3.0E-28 T 23-04-2016 CLI_RS14965 0d248239f19967933f1e05320d8b0174 184 Pfam PF02567 Phenazine biosynthesis-like protein 6 103 3.5E-17 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CLI_RS14965 0d248239f19967933f1e05320d8b0174 184 PANTHER PTHR13774 1 164 3.6E-34 T 23-04-2016 CLI_RS16190 5c778b8204813412b63062d6e5595d19 92 SUPERFAMILY SSF51182 1 91 4.82E-31 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS16190 5c778b8204813412b63062d6e5595d19 92 PANTHER PTHR36540 1 92 3.4E-44 T 23-04-2016 CLI_RS16190 5c778b8204813412b63062d6e5595d19 92 PANTHER PTHR36540:SF1 1 92 3.4E-44 T 23-04-2016 CLI_RS16190 5c778b8204813412b63062d6e5595d19 92 Pfam PF06865 Protein of unknown function (DUF1255) 2 91 4.4E-32 T 23-04-2016 IPR009664 Protein of unknown function DUF1255 CLI_RS16190 5c778b8204813412b63062d6e5595d19 92 Gene3D G3DSA:2.60.120.10 1 92 4.5E-34 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS09135 72f2b524c3c8cdfb58f40d4795546732 82 SUPERFAMILY SSF55021 3 80 9.15E-15 T 23-04-2016 CLI_RS09135 72f2b524c3c8cdfb58f40d4795546732 82 Gene3D G3DSA:3.30.70.1150 3 80 8.7E-14 T 23-04-2016 CLI_RS18120 0840941dea1eda9e6a75316419c19d63 258 SUPERFAMILY SSF53067 123 257 6.26E-35 T 23-04-2016 CLI_RS18120 0840941dea1eda9e6a75316419c19d63 258 Gene3D G3DSA:3.30.420.40 1 78 7.2E-4 T 23-04-2016 CLI_RS18120 0840941dea1eda9e6a75316419c19d63 258 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 253 1.8E-75 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CLI_RS18120 0840941dea1eda9e6a75316419c19d63 258 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 258 36.994 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CLI_RS18120 0840941dea1eda9e6a75316419c19d63 258 SUPERFAMILY SSF53067 1 121 6.47E-40 T 23-04-2016 CLI_RS18120 0840941dea1eda9e6a75316419c19d63 258 Gene3D G3DSA:3.30.420.40 94 258 1.3E-51 T 23-04-2016 CLI_RS18120 0840941dea1eda9e6a75316419c19d63 258 PANTHER PTHR34265 1 257 2.4E-81 T 23-04-2016 CLI_RS18120 0840941dea1eda9e6a75316419c19d63 258 Pfam PF03309 Type III pantothenate kinase 2 205 1.8E-74 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CLI_RS01015 1ded8a0d780b31242178213cd7e9b72c 175 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.8E-27 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CLI_RS01015 1ded8a0d780b31242178213cd7e9b72c 175 SUPERFAMILY SSF69754 2 109 3.4E-32 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CLI_RS01015 1ded8a0d780b31242178213cd7e9b72c 175 PANTHER PTHR33231 1 175 9.2E-67 T 23-04-2016 CLI_RS01015 1ded8a0d780b31242178213cd7e9b72c 175 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.2E-28 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CLI_RS01015 1ded8a0d780b31242178213cd7e9b72c 175 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 115 170 6.7E-31 T 23-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal CLI_RS01015 1ded8a0d780b31242178213cd7e9b72c 175 Gene3D G3DSA:3.30.160.100 1 95 6.8E-33 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CLI_RS16690 5debfa8368c373019eb8c4fef73678cc 156 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 149 1.4E-33 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 CLI_RS16690 5debfa8368c373019eb8c4fef73678cc 156 SUPERFAMILY SSF56300 2 154 8.2E-41 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS16690 5debfa8368c373019eb8c4fef73678cc 156 PANTHER PTHR11124 1 155 9.5E-47 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 CLI_RS16690 5debfa8368c373019eb8c4fef73678cc 156 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 145 3.8E-29 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type CLI_RS16690 5debfa8368c373019eb8c4fef73678cc 156 Gene3D G3DSA:3.60.21.10 2 150 1.2E-37 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS16690 5debfa8368c373019eb8c4fef73678cc 156 PANTHER PTHR11124:SF14 1 155 9.5E-47 T 23-04-2016 CLI_RS07775 c2dd93c406fd538c9a6a02391849c682 207 PANTHER PTHR30328:SF11 9 202 4.5E-36 T 23-04-2016 CLI_RS07775 c2dd93c406fd538c9a6a02391849c682 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.8E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS07775 c2dd93c406fd538c9a6a02391849c682 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.8E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS07775 c2dd93c406fd538c9a6a02391849c682 207 Gene3D G3DSA:1.10.357.10 62 207 3.0E-32 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS07775 c2dd93c406fd538c9a6a02391849c682 207 SUPERFAMILY SSF46689 7 75 1.9E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS07775 c2dd93c406fd538c9a6a02391849c682 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 3.9E-16 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS07775 c2dd93c406fd538c9a6a02391849c682 207 SUPERFAMILY SSF48498 83 207 7.11E-30 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS07775 c2dd93c406fd538c9a6a02391849c682 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLI_RS07775 c2dd93c406fd538c9a6a02391849c682 207 PANTHER PTHR30328 9 202 4.5E-36 T 23-04-2016 CLI_RS07775 c2dd93c406fd538c9a6a02391849c682 207 Gene3D G3DSA:1.10.10.60 10 61 2.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS15905 54dc4d457cae1169777bdd302e84131d 138 Pfam PF05105 Bacteriophage holin family 17 128 1.1E-39 T 23-04-2016 IPR006480 Bacteriophage holin family CLI_RS15905 54dc4d457cae1169777bdd302e84131d 138 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 14 137 3.0E-31 T 23-04-2016 IPR006480 Bacteriophage holin family CLI_RS08515 147ecd0dab3d6d7e63e16dc0954b32d7 668 Gene3D G3DSA:3.30.450.20 74 174 5.1E-26 T 23-04-2016 CLI_RS08515 147ecd0dab3d6d7e63e16dc0954b32d7 668 PANTHER PTHR32089:SF37 1 668 0.0 T 23-04-2016 CLI_RS08515 147ecd0dab3d6d7e63e16dc0954b32d7 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 451 656 1.2E-40 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS08515 147ecd0dab3d6d7e63e16dc0954b32d7 668 SMART SM00283 392 667 2.7E-62 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS08515 147ecd0dab3d6d7e63e16dc0954b32d7 668 PANTHER PTHR32089 1 668 0.0 T 23-04-2016 CLI_RS08515 147ecd0dab3d6d7e63e16dc0954b32d7 668 Gene3D G3DSA:1.10.287.950 407 623 3.9E-49 T 23-04-2016 CLI_RS08515 147ecd0dab3d6d7e63e16dc0954b32d7 668 Pfam PF02743 Cache domain 45 267 1.2E-27 T 23-04-2016 IPR033479 Double Cache domain 1 CLI_RS08515 147ecd0dab3d6d7e63e16dc0954b32d7 668 SUPERFAMILY SSF103190 117 183 1.06E-14 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS08515 147ecd0dab3d6d7e63e16dc0954b32d7 668 SUPERFAMILY SSF58104 398 666 1.05E-66 T 23-04-2016 CLI_RS08515 147ecd0dab3d6d7e63e16dc0954b32d7 668 SUPERFAMILY SSF58104 331 365 1.05E-66 T 23-04-2016 CLI_RS04710 83e911316edc4573d7be0d44ce22dfdd 370 Gene3D G3DSA:3.60.60.10 92 346 3.6E-31 T 23-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 CLI_RS04710 83e911316edc4573d7be0d44ce22dfdd 370 SUPERFAMILY SSF56235 96 236 3.55E-17 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS04710 83e911316edc4573d7be0d44ce22dfdd 370 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 104 334 6.0E-35 T 23-04-2016 IPR005079 Peptidase C45 CLI_RS00495 0d8e81ea523a085d630e986129d455f9 445 PIRSF PIRSF006603 1 445 2.1E-96 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS00495 0d8e81ea523a085d630e986129d455f9 445 PANTHER PTHR11206 5 442 1.6E-101 T 23-04-2016 CLI_RS00495 0d8e81ea523a085d630e986129d455f9 445 Pfam PF01554 MatE 17 179 4.6E-29 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS00495 0d8e81ea523a085d630e986129d455f9 445 Pfam PF01554 MatE 245 406 1.6E-32 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS00495 0d8e81ea523a085d630e986129d455f9 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 6.2E-84 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS00495 0d8e81ea523a085d630e986129d455f9 445 PANTHER PTHR11206:SF95 5 442 1.6E-101 T 23-04-2016 CLI_RS07815 2b5d22f06ba0c8d16c9c31d9323dc35c 162 SUPERFAMILY SSF48695 29 153 1.76E-8 T 23-04-2016 IPR011031 Multihaem cytochrome CLI_RS07815 2b5d22f06ba0c8d16c9c31d9323dc35c 162 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 32 151 7.5E-28 T 23-04-2016 IPR010181 CGCAxxGCC motif CLI_RS07815 2b5d22f06ba0c8d16c9c31d9323dc35c 162 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 32 146 3.4E-23 T 23-04-2016 IPR010181 CGCAxxGCC motif CLI_RS08245 ab81a5e091713947dcb62e8a7f8714c9 263 PANTHER PTHR15822 1 263 1.6E-100 T 23-04-2016 CLI_RS08245 ab81a5e091713947dcb62e8a7f8714c9 263 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 254 2.8E-17 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CLI_RS08245 ab81a5e091713947dcb62e8a7f8714c9 263 SUPERFAMILY SSF56219 1 261 1.05E-35 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CLI_RS08245 ab81a5e091713947dcb62e8a7f8714c9 263 Gene3D G3DSA:3.60.10.10 1 262 2.7E-25 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CLI_RS08245 ab81a5e091713947dcb62e8a7f8714c9 263 PANTHER PTHR15822:SF7 1 263 1.6E-100 T 23-04-2016 CLI_RS14625 a558ddbc4023f84c3ae7eb0f44f2e3a1 342 SMART SM00471 71 199 3.8E-13 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS14625 a558ddbc4023f84c3ae7eb0f44f2e3a1 342 Pfam PF01966 HD domain 75 188 5.6E-18 T 23-04-2016 IPR006674 HD domain CLI_RS14625 a558ddbc4023f84c3ae7eb0f44f2e3a1 342 PANTHER PTHR11373:SF25 1 164 5.5E-91 T 23-04-2016 CLI_RS14625 a558ddbc4023f84c3ae7eb0f44f2e3a1 342 SUPERFAMILY SSF109604 27 340 9.91E-75 T 23-04-2016 CLI_RS14625 a558ddbc4023f84c3ae7eb0f44f2e3a1 342 Pfam PF13286 Phosphohydrolase-associated domain 247 331 4.9E-15 T 23-04-2016 IPR026875 Phosphohydrolase-associated domain CLI_RS14625 a558ddbc4023f84c3ae7eb0f44f2e3a1 342 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 38 165 2.7E-45 T 23-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 CLI_RS14625 a558ddbc4023f84c3ae7eb0f44f2e3a1 342 PANTHER PTHR11373 1 164 5.5E-91 T 23-04-2016 CLI_RS14625 a558ddbc4023f84c3ae7eb0f44f2e3a1 342 Gene3D G3DSA:1.10.3210.10 38 337 1.9E-69 T 23-04-2016 IPR006674 HD domain CLI_RS05510 aa6d2e3e4e93f5eb5faabaf4a0e5e9ee 251 SUPERFAMILY SSF52540 1 226 6.37E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05510 aa6d2e3e4e93f5eb5faabaf4a0e5e9ee 251 PANTHER PTHR24220 3 250 5.8E-158 T 23-04-2016 CLI_RS05510 aa6d2e3e4e93f5eb5faabaf4a0e5e9ee 251 SMART SM00382 26 213 4.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS05510 aa6d2e3e4e93f5eb5faabaf4a0e5e9ee 251 Pfam PF00005 ABC transporter 18 164 2.2E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS05510 aa6d2e3e4e93f5eb5faabaf4a0e5e9ee 251 PANTHER PTHR24220:SF471 3 250 5.8E-158 T 23-04-2016 CLI_RS05510 aa6d2e3e4e93f5eb5faabaf4a0e5e9ee 251 Gene3D G3DSA:3.40.50.300 1 229 7.0E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01345 f145096f84a8c1c1c8a31bd9ec0cc832 167 Pfam PF08877 MepB protein 29 150 6.6E-49 T 23-04-2016 IPR011235 MepB-like CLI_RS01345 f145096f84a8c1c1c8a31bd9ec0cc832 167 PIRSF PIRSF032285 2 167 5.2E-66 T 23-04-2016 IPR011235 MepB-like CLI_RS01345 f145096f84a8c1c1c8a31bd9ec0cc832 167 PANTHER PTHR41289 1 158 1.2E-51 T 23-04-2016 CLI_RS12150 29872e892937da577182c1eb487285ab 233 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CLI_RS12150 29872e892937da577182c1eb487285ab 233 Pfam PF00318 Ribosomal protein S2 9 225 1.0E-97 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12150 29872e892937da577182c1eb487285ab 233 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 226 42.338 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CLI_RS12150 29872e892937da577182c1eb487285ab 233 SUPERFAMILY SSF52313 6 229 5.62E-93 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain CLI_RS12150 29872e892937da577182c1eb487285ab 233 PRINTS PR00395 Ribosomal protein S2 signature 197 211 9.3E-38 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12150 29872e892937da577182c1eb487285ab 233 PRINTS PR00395 Ribosomal protein S2 signature 87 104 9.3E-38 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12150 29872e892937da577182c1eb487285ab 233 PRINTS PR00395 Ribosomal protein S2 signature 6 24 9.3E-38 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12150 29872e892937da577182c1eb487285ab 233 PRINTS PR00395 Ribosomal protein S2 signature 159 176 9.3E-38 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12150 29872e892937da577182c1eb487285ab 233 PRINTS PR00395 Ribosomal protein S2 signature 37 46 9.3E-38 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12150 29872e892937da577182c1eb487285ab 233 PRINTS PR00395 Ribosomal protein S2 signature 176 187 9.3E-38 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12150 29872e892937da577182c1eb487285ab 233 Gene3D G3DSA:3.40.50.10490 159 230 1.7E-69 T 23-04-2016 CLI_RS12150 29872e892937da577182c1eb487285ab 233 Gene3D G3DSA:3.40.50.10490 23 99 1.7E-69 T 23-04-2016 CLI_RS12150 29872e892937da577182c1eb487285ab 233 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 227 4.6E-106 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CLI_RS12150 29872e892937da577182c1eb487285ab 233 Gene3D G3DSA:1.10.287.610 100 152 7.3E-26 T 23-04-2016 CLI_RS12150 29872e892937da577182c1eb487285ab 233 PANTHER PTHR12534 1 227 4.8E-119 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CLI_RS12825 5eba329c18f6a3f61fbd00868c48db9c 83 PIRSF PIRSF037258 1 83 3.7E-37 T 23-04-2016 IPR009309 Uncharacterised protein family UPF0297 CLI_RS12825 5eba329c18f6a3f61fbd00868c48db9c 83 PANTHER PTHR40067 1 83 3.9E-44 T 23-04-2016 CLI_RS12825 5eba329c18f6a3f61fbd00868c48db9c 83 Hamap MF_01507 UPF0297 protein . 1 83 23.014 T 23-04-2016 IPR009309 Uncharacterised protein family UPF0297 CLI_RS12825 5eba329c18f6a3f61fbd00868c48db9c 83 Pfam PF06135 Bacterial protein of unknown function (DUF965) 4 80 1.2E-34 T 23-04-2016 IPR009309 Uncharacterised protein family UPF0297 CLI_RS08905 ce849f626a63a8c0af4c12a61a92e546 164 SUPERFAMILY SSF52821 47 159 1.31E-13 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS08905 ce849f626a63a8c0af4c12a61a92e546 164 Gene3D G3DSA:3.40.250.10 43 161 9.7E-16 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS08905 ce849f626a63a8c0af4c12a61a92e546 164 Pfam PF00581 Rhodanese-like domain 55 157 9.8E-11 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS08905 ce849f626a63a8c0af4c12a61a92e546 164 SMART SM00450 54 162 3.9E-5 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS17835 8956f7ab82d711ef428093c729c5a726 206 PANTHER PTHR10746 1 205 1.4E-93 T 23-04-2016 IPR013005 50S ribosomal protein uL4 CLI_RS17835 8956f7ab82d711ef428093c729c5a726 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 203 4.3E-81 T 23-04-2016 IPR013005 50S ribosomal protein uL4 CLI_RS17835 8956f7ab82d711ef428093c729c5a726 206 Pfam PF00573 Ribosomal protein L4/L1 family 18 203 7.7E-72 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CLI_RS17835 8956f7ab82d711ef428093c729c5a726 206 SUPERFAMILY SSF52166 1 205 5.89E-81 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CLI_RS17835 8956f7ab82d711ef428093c729c5a726 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 206 36.177 T 23-04-2016 IPR013005 50S ribosomal protein uL4 CLI_RS17835 8956f7ab82d711ef428093c729c5a726 206 Gene3D G3DSA:3.40.1370.10 58 206 1.1E-63 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CLI_RS15510 b9e1f1e0fe4e9cdaf97044bb68c2a114 1154 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 1008 1136 4.1E-13 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CLI_RS15510 b9e1f1e0fe4e9cdaf97044bb68c2a114 1154 SMART SM00047 995 1149 3.3E-39 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CLI_RS15510 b9e1f1e0fe4e9cdaf97044bb68c2a114 1154 PANTHER PTHR30032:SF6 406 889 1.7E-240 T 23-04-2016 CLI_RS15510 b9e1f1e0fe4e9cdaf97044bb68c2a114 1154 SUPERFAMILY SSF117281 484 528 5.89E-9 T 23-04-2016 CLI_RS15510 b9e1f1e0fe4e9cdaf97044bb68c2a114 1154 SUPERFAMILY SSF117281 583 631 5.89E-9 T 23-04-2016 CLI_RS15510 b9e1f1e0fe4e9cdaf97044bb68c2a114 1154 SUPERFAMILY SSF117281 378 434 5.89E-9 T 23-04-2016 CLI_RS15510 b9e1f1e0fe4e9cdaf97044bb68c2a114 1154 SUPERFAMILY SSF117281 293 328 5.89E-9 T 23-04-2016 CLI_RS15510 b9e1f1e0fe4e9cdaf97044bb68c2a114 1154 PANTHER PTHR30032 406 889 1.7E-240 T 23-04-2016 CLI_RS15710 d7bfe3eecda7464fe15c2ff84b251ba3 339 SUPERFAMILY SSF52540 32 322 2.66E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15710 d7bfe3eecda7464fe15c2ff84b251ba3 339 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 321 5.5E-27 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLI_RS15710 d7bfe3eecda7464fe15c2ff84b251ba3 339 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS15710 d7bfe3eecda7464fe15c2ff84b251ba3 339 SMART SM00382 33 234 1.2E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS15710 d7bfe3eecda7464fe15c2ff84b251ba3 339 PANTHER PTHR24220:SF535 6 327 2.9E-163 T 23-04-2016 CLI_RS15710 d7bfe3eecda7464fe15c2ff84b251ba3 339 PANTHER PTHR24220 6 327 2.9E-163 T 23-04-2016 CLI_RS15710 d7bfe3eecda7464fe15c2ff84b251ba3 339 Gene3D G3DSA:3.40.50.300 4 259 1.0E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15710 d7bfe3eecda7464fe15c2ff84b251ba3 339 Pfam PF00005 ABC transporter 25 184 1.1E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS15710 d7bfe3eecda7464fe15c2ff84b251ba3 339 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 2.0E-19 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLI_RS16505 f2a9ccf1674304da8c779cc5d5806f51 83 Pfam PF11823 Protein of unknown function (DUF3343) 5 72 2.7E-22 T 23-04-2016 IPR021778 Protein of unknown function DUF3343 CLI_RS12970 68bedc8ea9085ed1dec75ee3c1575fbe 246 Gene3D G3DSA:3.90.470.20 52 152 1.1E-18 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLI_RS12970 68bedc8ea9085ed1dec75ee3c1575fbe 246 Gene3D G3DSA:3.90.470.20 153 220 2.8E-10 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLI_RS12970 68bedc8ea9085ed1dec75ee3c1575fbe 246 PANTHER PTHR12215 1 245 7.2E-43 T 23-04-2016 CLI_RS12970 68bedc8ea9085ed1dec75ee3c1575fbe 246 PANTHER PTHR12215:SF10 1 245 7.2E-43 T 23-04-2016 CLI_RS12970 68bedc8ea9085ed1dec75ee3c1575fbe 246 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 141 211 3.7E-9 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLI_RS12970 68bedc8ea9085ed1dec75ee3c1575fbe 246 SUPERFAMILY SSF56214 46 133 5.75E-12 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLI_RS12970 68bedc8ea9085ed1dec75ee3c1575fbe 246 SUPERFAMILY SSF56214 141 210 5.58E-10 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLI_RS12845 290f9aa83bb7c999caf2ccaee6356023 142 TIGRFAM TIGR03419 NifU_clost: FeS cluster assembly scaffold protein NifU 2 121 1.1E-70 T 23-04-2016 IPR017787 NIF system FeS cluster assembly, NifU-like CLI_RS12845 290f9aa83bb7c999caf2ccaee6356023 142 PANTHER PTHR10093:SF1 1 141 1.4E-76 T 23-04-2016 CLI_RS12845 290f9aa83bb7c999caf2ccaee6356023 142 SUPERFAMILY SSF82649 4 122 9.42E-48 T 23-04-2016 CLI_RS12845 290f9aa83bb7c999caf2ccaee6356023 142 PANTHER PTHR10093 1 141 1.4E-76 T 23-04-2016 CLI_RS12845 290f9aa83bb7c999caf2ccaee6356023 142 Gene3D G3DSA:3.90.1010.10 1 121 3.9E-52 T 23-04-2016 CLI_RS12845 290f9aa83bb7c999caf2ccaee6356023 142 Pfam PF01592 NifU-like N terminal domain 1 120 1.6E-51 T 23-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 CLI_RS10740 e34d46ade41139549475a7307c39cbe1 379 Pfam PF01761 3-dehydroquinate synthase 82 339 6.4E-71 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CLI_RS10740 e34d46ade41139549475a7307c39cbe1 379 Gene3D G3DSA:1.20.1090.10 190 375 6.5E-45 T 23-04-2016 CLI_RS10740 e34d46ade41139549475a7307c39cbe1 379 PANTHER PTHR21090 10 377 1.1E-124 T 23-04-2016 CLI_RS10740 e34d46ade41139549475a7307c39cbe1 379 Gene3D G3DSA:3.40.50.1970 27 186 4.5E-43 T 23-04-2016 CLI_RS10740 e34d46ade41139549475a7307c39cbe1 379 PIRSF PIRSF001455 32 379 1.9E-93 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CLI_RS10740 e34d46ade41139549475a7307c39cbe1 379 SUPERFAMILY SSF56796 27 359 1.26E-73 T 23-04-2016 CLI_RS02595 8f0a4da0e74c6ef2187ae30630313966 79 Gene3D G3DSA:1.10.260.40 1 70 2.7E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS02595 8f0a4da0e74c6ef2187ae30630313966 79 PANTHER PTHR37301 2 79 1.3E-37 T 23-04-2016 CLI_RS02595 8f0a4da0e74c6ef2187ae30630313966 79 SUPERFAMILY SSF47413 2 70 9.57E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS02595 8f0a4da0e74c6ef2187ae30630313966 79 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 3.1E-23 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS02595 8f0a4da0e74c6ef2187ae30630313966 79 SMART SM00530 6 62 1.5E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 SUPERFAMILY SSF51569 1 290 4.61E-98 T 23-04-2016 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 PANTHER PTHR12128 3 292 6.0E-130 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 PANTHER PTHR12128:SF34 3 292 6.0E-130 T 23-04-2016 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 Gene3D G3DSA:3.20.20.70 1 292 1.0E-113 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 287 1.9E-104 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 23-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 PIRSF PIRSF001365 1 292 8.0E-90 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 1.5E-31 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.5E-31 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.5E-31 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 1.5E-31 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 SMART SM01130 3 290 8.2E-130 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 3.8E-90 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CLI_RS15735 eaf7c19e0d1fab4bc718bed6949f587c 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 288 61.559 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS14875 67e31b7579b6e089787181f1c4d1a122 479 Gene3D G3DSA:2.40.50.140 29 109 1.5E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS14875 67e31b7579b6e089787181f1c4d1a122 479 SMART SM00316 36 103 4.8E-6 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS14875 67e31b7579b6e089787181f1c4d1a122 479 Pfam PF10150 Ribonuclease E/G family 105 370 2.5E-79 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CLI_RS14875 67e31b7579b6e089787181f1c4d1a122 479 SUPERFAMILY SSF50249 38 109 4.52E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS14875 67e31b7579b6e089787181f1c4d1a122 479 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 399 2.6E-101 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CLI_RS14875 67e31b7579b6e089787181f1c4d1a122 479 PANTHER PTHR30001 2 478 4.1E-142 T 23-04-2016 CLI_RS07875 c96b3c6c674af202c60f66471cb26a91 402 PANTHER PTHR31862 1 402 8.8E-209 T 23-04-2016 CLI_RS07875 c96b3c6c674af202c60f66471cb26a91 402 Pfam PF06792 Uncharacterised protein family (UPF0261) 2 400 7.4E-167 T 23-04-2016 IPR008322 Uncharacterised protein family UPF0261 CLI_RS07875 c96b3c6c674af202c60f66471cb26a91 402 PIRSF PIRSF033271 1 402 8.9E-149 T 23-04-2016 IPR008322 Uncharacterised protein family UPF0261 CLI_RS10735 68028f66e77ee934c94d82022de8886d 285 Pfam PF01261 Xylose isomerase-like TIM barrel 21 228 1.6E-25 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS10735 68028f66e77ee934c94d82022de8886d 285 SUPERFAMILY SSF51658 3 272 1.57E-50 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS10735 68028f66e77ee934c94d82022de8886d 285 PANTHER PTHR12110:SF21 1 284 5.3E-77 T 23-04-2016 CLI_RS10735 68028f66e77ee934c94d82022de8886d 285 PANTHER PTHR12110 1 284 5.3E-77 T 23-04-2016 CLI_RS10735 68028f66e77ee934c94d82022de8886d 285 Gene3D G3DSA:3.20.20.150 3 271 7.1E-67 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS02750 1279ca76fa90f071642f631b6d1adb7f 314 SUPERFAMILY SSF53474 6 307 3.48E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS02750 1279ca76fa90f071642f631b6d1adb7f 314 PANTHER PTHR11614 6 310 2.9E-58 T 23-04-2016 CLI_RS02750 1279ca76fa90f071642f631b6d1adb7f 314 Pfam PF12146 Serine aminopeptidase, S33 28 292 4.3E-62 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 CLI_RS02750 1279ca76fa90f071642f631b6d1adb7f 314 Gene3D G3DSA:3.40.50.1820 1 150 5.3E-68 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS02750 1279ca76fa90f071642f631b6d1adb7f 314 Gene3D G3DSA:3.40.50.1820 187 313 5.3E-68 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS04540 7941c9d7c1d2cd378bcba14d4dbaf4c6 192 Gene3D G3DSA:3.40.50.450 2 184 2.8E-67 T 23-04-2016 CLI_RS04540 7941c9d7c1d2cd378bcba14d4dbaf4c6 192 PANTHER PTHR31223:SF0 1 189 4.3E-100 T 23-04-2016 CLI_RS04540 7941c9d7c1d2cd378bcba14d4dbaf4c6 192 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 5.1E-67 T 23-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CLI_RS04540 7941c9d7c1d2cd378bcba14d4dbaf4c6 192 SUPERFAMILY SSF102405 1 179 1.68E-58 T 23-04-2016 CLI_RS04540 7941c9d7c1d2cd378bcba14d4dbaf4c6 192 Pfam PF03641 Possible lysine decarboxylase 46 176 1.6E-42 T 23-04-2016 IPR031100 LOG family CLI_RS04540 7941c9d7c1d2cd378bcba14d4dbaf4c6 192 PANTHER PTHR31223 1 189 4.3E-100 T 23-04-2016 CLI_RS09080 de443249e8e09b1e8434fbc24531f689 292 PANTHER PTHR16222:SF12 1 290 1.7E-63 T 23-04-2016 CLI_RS09080 de443249e8e09b1e8434fbc24531f689 292 PANTHER PTHR16222 1 290 1.7E-63 T 23-04-2016 CLI_RS09080 de443249e8e09b1e8434fbc24531f689 292 Pfam PF03747 ADP-ribosylglycohydrolase 9 270 5.8E-50 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 CLI_RS09080 de443249e8e09b1e8434fbc24531f689 292 SUPERFAMILY SSF101478 2 289 2.62E-62 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 CLI_RS09665 9ee68067d138a9205c7909d398757907 357 SUPERFAMILY SSF69304 108 345 1.02E-14 T 23-04-2016 CLI_RS09665 9ee68067d138a9205c7909d398757907 357 Gene3D G3DSA:2.120.10.30 109 346 4.4E-11 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS09545 a34f4b75ee4b954e65fc70ea4f922f7a 131 PANTHER PTHR34297 1 124 3.2E-46 T 23-04-2016 CLI_RS09545 a34f4b75ee4b954e65fc70ea4f922f7a 131 PANTHER PTHR34297:SF1 1 124 3.2E-46 T 23-04-2016 CLI_RS09545 a34f4b75ee4b954e65fc70ea4f922f7a 131 Pfam PF03780 Asp23 family, cell envelope-related function 11 117 1.4E-37 T 23-04-2016 IPR005531 Alkaline shock protein Asp23 CLI_RS18400 39092bc822d73fac0c4fb46c682b6d5e 211 PANTHER PTHR10204 1 207 3.3E-129 T 23-04-2016 CLI_RS18400 39092bc822d73fac0c4fb46c682b6d5e 211 PANTHER PTHR10204:SF43 1 207 3.3E-129 T 23-04-2016 CLI_RS18400 39092bc822d73fac0c4fb46c682b6d5e 211 Pfam PF03358 NADPH-dependent FMN reductase 1 156 5.6E-29 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLI_RS18400 39092bc822d73fac0c4fb46c682b6d5e 211 SUPERFAMILY SSF52218 1 196 1.29E-44 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS18400 39092bc822d73fac0c4fb46c682b6d5e 211 Gene3D G3DSA:3.40.50.360 1 184 2.4E-38 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS17230 58e5e5d70b0ba803610ddf4b2eeed28f 91 Gene3D G3DSA:1.10.10.60 50 88 1.8E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS17230 58e5e5d70b0ba803610ddf4b2eeed28f 91 PANTHER PTHR37812:SF1 1 89 2.6E-24 T 23-04-2016 CLI_RS17230 58e5e5d70b0ba803610ddf4b2eeed28f 91 Pfam PF08765 Mor transcription activator family 8 89 1.6E-8 T 23-04-2016 IPR014875 Mor transcription activator CLI_RS17230 58e5e5d70b0ba803610ddf4b2eeed28f 91 PANTHER PTHR37812 1 89 2.6E-24 T 23-04-2016 CLI_RS17230 58e5e5d70b0ba803610ddf4b2eeed28f 91 SUPERFAMILY SSF46689 2 88 3.23E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS17975 c1fd89d2f70cbf0d61ca041759d99ddf 229 SUPERFAMILY SSF53448 4 226 1.3E-61 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS17975 c1fd89d2f70cbf0d61ca041759d99ddf 229 Gene3D G3DSA:3.90.550.10 2 227 8.7E-76 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS17975 c1fd89d2f70cbf0d61ca041759d99ddf 229 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 224 1.7E-75 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS17975 c1fd89d2f70cbf0d61ca041759d99ddf 229 PANTHER PTHR32125:SF4 5 227 2.6E-93 T 23-04-2016 CLI_RS17975 c1fd89d2f70cbf0d61ca041759d99ddf 229 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 3 228 30.184 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS17975 c1fd89d2f70cbf0d61ca041759d99ddf 229 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 226 4.0E-64 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS17975 c1fd89d2f70cbf0d61ca041759d99ddf 229 PANTHER PTHR32125 5 227 2.6E-93 T 23-04-2016 CLI_RS17975 c1fd89d2f70cbf0d61ca041759d99ddf 229 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 23-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS15480 21978ffa780482f0cce1bfab8388d387 369 PANTHER PTHR22604:SF120 1 361 2.7E-178 T 23-04-2016 CLI_RS15480 21978ffa780482f0cce1bfab8388d387 369 Gene3D G3DSA:3.40.50.720 1 143 1.3E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15480 21978ffa780482f0cce1bfab8388d387 369 Gene3D G3DSA:3.30.360.10 144 351 2.8E-48 T 23-04-2016 CLI_RS15480 21978ffa780482f0cce1bfab8388d387 369 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 2.1E-28 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 CLI_RS15480 21978ffa780482f0cce1bfab8388d387 369 SUPERFAMILY SSF51735 1 176 6.58E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15480 21978ffa780482f0cce1bfab8388d387 369 SUPERFAMILY SSF55347 139 285 2.62E-36 T 23-04-2016 CLI_RS15480 21978ffa780482f0cce1bfab8388d387 369 PANTHER PTHR22604 1 361 2.7E-178 T 23-04-2016 CLI_RS15480 21978ffa780482f0cce1bfab8388d387 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 59 75 9.8E-6 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 CLI_RS15480 21978ffa780482f0cce1bfab8388d387 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 2 15 9.8E-6 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 CLI_RS15480 21978ffa780482f0cce1bfab8388d387 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 121 135 9.8E-6 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 CLI_RS15480 21978ffa780482f0cce1bfab8388d387 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 318 334 9.8E-6 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 CLI_RS15480 21978ffa780482f0cce1bfab8388d387 369 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 143 241 5.1E-8 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CLI_RS01995 9437491fb74c864beca80b5334ebabf4 395 PANTHER PTHR40032:SF1 2 394 1.3E-253 T 23-04-2016 CLI_RS01995 9437491fb74c864beca80b5334ebabf4 395 Pfam PF12671 Putative amidase domain 215 391 7.5E-45 T 23-04-2016 IPR024301 Putative amidase domain CLI_RS01995 9437491fb74c864beca80b5334ebabf4 395 PANTHER PTHR40032 2 394 1.3E-253 T 23-04-2016 CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 156 3.0E-13 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 SUPERFAMILY SSF52540 4 167 1.54E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 Pfam PF07670 Nucleoside recognition 515 643 6.3E-30 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 Pfam PF07670 Nucleoside recognition 354 448 1.7E-11 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 Gene3D G3DSA:3.40.50.300 3 178 5.5E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 6.4E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 6.4E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 Pfam PF02421 Ferrous iron transport protein B 4 157 5.3E-68 T 23-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 Pfam PF07664 Ferrous iron transport protein B C terminus 458 510 1.1E-20 T 23-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 640 1.8E-178 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 PANTHER PTHR11649:SF37 1 145 2.7E-280 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 PANTHER PTHR11649:SF37 263 679 2.7E-280 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 PANTHER PTHR11649 1 145 2.7E-280 T 23-04-2016 CLI_RS05405 c59a1e35fe488f6bbed34a2f9e7307fa 718 PANTHER PTHR11649 263 679 2.7E-280 T 23-04-2016 CLI_RS14835 5be0c1ffa41b0a58df86b45080ab6582 424 PANTHER PTHR33392:SF6 3 424 3.4E-125 T 23-04-2016 CLI_RS14835 5be0c1ffa41b0a58df86b45080ab6582 424 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 88 241 2.9E-39 T 23-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain CLI_RS14835 5be0c1ffa41b0a58df86b45080ab6582 424 PANTHER PTHR33392 3 424 3.4E-125 T 23-04-2016 CLI_RS14835 5be0c1ffa41b0a58df86b45080ab6582 424 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 334 419 1.1E-12 T 23-04-2016 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain CLI_RS14835 5be0c1ffa41b0a58df86b45080ab6582 424 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 88 241 5.2E-42 T 23-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain CLI_RS05585 e99acc89a1b51ce72ba96f184fbcadc6 268 SUPERFAMILY SSF56281 134 244 4.57E-29 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05585 e99acc89a1b51ce72ba96f184fbcadc6 268 SUPERFAMILY SSF56281 13 105 4.57E-29 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05585 e99acc89a1b51ce72ba96f184fbcadc6 268 PANTHER PTHR13754:SF13 1 266 1.2E-95 T 23-04-2016 CLI_RS05585 e99acc89a1b51ce72ba96f184fbcadc6 268 SMART SM00849 21 241 0.0055 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05585 e99acc89a1b51ce72ba96f184fbcadc6 268 Pfam PF00753 Metallo-beta-lactamase superfamily 21 80 1.4E-11 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05585 e99acc89a1b51ce72ba96f184fbcadc6 268 Gene3D G3DSA:3.60.15.10 1 256 1.6E-30 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05585 e99acc89a1b51ce72ba96f184fbcadc6 268 PANTHER PTHR13754 1 266 1.2E-95 T 23-04-2016 CLI_RS11625 d056fb51cd9892460c420952846f5721 145 Gene3D G3DSA:1.10.260.40 95 143 6.4E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS11625 d056fb51cd9892460c420952846f5721 145 Gene3D G3DSA:1.10.260.40 24 80 4.5E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS11625 d056fb51cd9892460c420952846f5721 145 SUPERFAMILY SSF47413 96 143 4.13E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS11625 d056fb51cd9892460c420952846f5721 145 SUPERFAMILY SSF47413 26 83 1.69E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS11625 d056fb51cd9892460c420952846f5721 145 Pfam PF12844 Helix-turn-helix domain 29 83 2.8E-8 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS02010 2e8c8d9ab9a6d85388d890ceb70ad9b4 422 PANTHER PTHR32507 1 422 1.0E-142 T 23-04-2016 CLI_RS02010 2e8c8d9ab9a6d85388d890ceb70ad9b4 422 Pfam PF00999 Sodium/hydrogen exchanger family 18 398 9.1E-54 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CLI_RS02010 2e8c8d9ab9a6d85388d890ceb70ad9b4 422 PANTHER PTHR32507:SF0 1 422 1.0E-142 T 23-04-2016 CLI_RS14655 0e013b4f75c22a121670a94fabe90ad2 296 PANTHER PTHR11649 3 293 1.3E-124 T 23-04-2016 CLI_RS14655 0e013b4f75c22a121670a94fabe90ad2 296 Gene3D G3DSA:3.30.300.20 185 289 4.4E-41 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CLI_RS14655 0e013b4f75c22a121670a94fabe90ad2 296 Pfam PF07650 KH domain 204 281 2.6E-19 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 CLI_RS14655 0e013b4f75c22a121670a94fabe90ad2 296 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 164 2.1E-33 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS14655 0e013b4f75c22a121670a94fabe90ad2 296 SUPERFAMILY SSF52540 7 197 1.77E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14655 0e013b4f75c22a121670a94fabe90ad2 296 Pfam PF01926 50S ribosome-binding GTPase 7 121 4.0E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS14655 0e013b4f75c22a121670a94fabe90ad2 296 TIGRFAM TIGR00436 era: GTP-binding protein Era 5 275 5.4E-100 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CLI_RS14655 0e013b4f75c22a121670a94fabe90ad2 296 Gene3D G3DSA:3.40.50.300 4 170 1.5E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14655 0e013b4f75c22a121670a94fabe90ad2 296 SUPERFAMILY SSF54814 177 293 3.6E-41 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CLI_RS14655 0e013b4f75c22a121670a94fabe90ad2 296 PANTHER PTHR11649:SF3 3 293 1.3E-124 T 23-04-2016 CLI_RS14655 0e013b4f75c22a121670a94fabe90ad2 296 Hamap MF_00367 GTPase Era [era]. 2 292 37.736 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CLI_RS10255 ef44b4566012c7ab34a7b3565e191419 450 SUPERFAMILY SSF103473 11 429 4.32E-34 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS10255 ef44b4566012c7ab34a7b3565e191419 450 Pfam PF07690 Major Facilitator Superfamily 23 391 8.9E-25 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS10255 ef44b4566012c7ab34a7b3565e191419 450 PANTHER PTHR11654:SF119 2 391 2.9E-69 T 23-04-2016 CLI_RS10255 ef44b4566012c7ab34a7b3565e191419 450 PANTHER PTHR11654 2 391 2.9E-69 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS10255 ef44b4566012c7ab34a7b3565e191419 450 Gene3D G3DSA:1.20.1250.20 29 216 9.0E-19 T 23-04-2016 CLI_RS10255 ef44b4566012c7ab34a7b3565e191419 450 Gene3D G3DSA:1.20.1250.20 217 429 2.3E-6 T 23-04-2016 CLI_RS12460 7282f8a7b6415a90de0bbc06d4b00956 388 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 24 379 2.2E-145 T 23-04-2016 IPR014226 Sporulation integral membrane protein YlbJ CLI_RS15800 e23fa098fa43bc910d0b8f1deeb45e5a 414 Gene3D G3DSA:3.40.50.200 7 234 1.4E-24 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLI_RS15800 e23fa098fa43bc910d0b8f1deeb45e5a 414 SUPERFAMILY SSF52743 7 233 1.44E-27 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLI_RS15800 e23fa098fa43bc910d0b8f1deeb45e5a 414 Pfam PF00082 Subtilase family 46 232 4.5E-13 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLI_RS11645 07c0df3b05299bd70bfceb9a7b43e92a 252 Gene3D G3DSA:3.90.1720.10 26 141 1.1E-48 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS11645 07c0df3b05299bd70bfceb9a7b43e92a 252 Pfam PF00877 NlpC/P60 family 43 140 3.0E-30 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS11645 07c0df3b05299bd70bfceb9a7b43e92a 252 PANTHER PTHR21666 31 143 8.4E-39 T 23-04-2016 CLI_RS11645 07c0df3b05299bd70bfceb9a7b43e92a 252 SUPERFAMILY SSF54001 27 140 4.41E-45 T 23-04-2016 CLI_RS03830 ea34d4028cd85d8cd9c765846349c885 293 SUPERFAMILY SSF103481 186 279 3.92E-13 T 23-04-2016 CLI_RS03830 ea34d4028cd85d8cd9c765846349c885 293 SUPERFAMILY SSF103481 39 137 8.76E-14 T 23-04-2016 CLI_RS03830 ea34d4028cd85d8cd9c765846349c885 293 PANTHER PTHR22911 9 288 6.9E-47 T 23-04-2016 CLI_RS03830 ea34d4028cd85d8cd9c765846349c885 293 Pfam PF00892 EamA-like transporter family 8 134 3.5E-15 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CLI_RS03830 ea34d4028cd85d8cd9c765846349c885 293 Pfam PF00892 EamA-like transporter family 147 279 2.3E-21 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CLI_RS06890 50195418a138a2450774735f7db336d1 124 SUPERFAMILY SSF46785 6 78 1.39E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06890 50195418a138a2450774735f7db336d1 124 Gene3D G3DSA:1.10.10.10 4 77 6.3E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06890 50195418a138a2450774735f7db336d1 124 SMART SM00345 13 76 3.3E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS06890 50195418a138a2450774735f7db336d1 124 PANTHER PTHR38445 1 122 1.4E-26 T 23-04-2016 CLI_RS06890 50195418a138a2450774735f7db336d1 124 PANTHER PTHR38445:SF2 1 122 1.4E-26 T 23-04-2016 CLI_RS06890 50195418a138a2450774735f7db336d1 124 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 2.5E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS14130 8ab688aaf426d8e15c6b4117d931b95c 456 Pfam PF01554 MatE 23 184 9.9E-28 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS14130 8ab688aaf426d8e15c6b4117d931b95c 456 Pfam PF01554 MatE 244 404 3.1E-17 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS14130 8ab688aaf426d8e15c6b4117d931b95c 456 PIRSF PIRSF006603 1 452 1.6E-89 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS14130 8ab688aaf426d8e15c6b4117d931b95c 456 PANTHER PTHR11206:SF132 1 456 9.9E-154 T 23-04-2016 CLI_RS14130 8ab688aaf426d8e15c6b4117d931b95c 456 PANTHER PTHR11206 1 456 9.9E-154 T 23-04-2016 CLI_RS14130 8ab688aaf426d8e15c6b4117d931b95c 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 416 1.5E-59 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS04580 dc4b54ef290116987f1018baffa26535 140 SUPERFAMILY SSF50475 5 80 3.73E-9 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS04580 dc4b54ef290116987f1018baffa26535 140 Gene3D G3DSA:2.30.110.10 1 140 1.9E-58 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS00740 7f0ada57ca8869207823c5d5599e69cb 280 Pfam PF08544 GHMP kinases C terminal 195 272 1.5E-9 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CLI_RS00740 7f0ada57ca8869207823c5d5599e69cb 280 PANTHER PTHR20861:SF2 7 279 1.9E-97 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS00740 7f0ada57ca8869207823c5d5599e69cb 280 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 277 33.748 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS00740 7f0ada57ca8869207823c5d5599e69cb 280 SUPERFAMILY SSF54211 3 153 3.95E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS00740 7f0ada57ca8869207823c5d5599e69cb 280 PIRSF PIRSF010376 1 280 6.5E-92 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS00740 7f0ada57ca8869207823c5d5599e69cb 280 SUPERFAMILY SSF55060 159 279 2.82E-27 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CLI_RS00740 7f0ada57ca8869207823c5d5599e69cb 280 Pfam PF00288 GHMP kinases N terminal domain 83 141 1.3E-5 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 CLI_RS00740 7f0ada57ca8869207823c5d5599e69cb 280 Gene3D G3DSA:3.30.70.890 163 279 7.3E-32 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CLI_RS00740 7f0ada57ca8869207823c5d5599e69cb 280 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 273 7.7E-81 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CLI_RS00740 7f0ada57ca8869207823c5d5599e69cb 280 PANTHER PTHR20861 7 279 1.9E-97 T 23-04-2016 CLI_RS00740 7f0ada57ca8869207823c5d5599e69cb 280 Gene3D G3DSA:3.30.230.10 3 155 7.2E-52 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS17390 5faa6d616a81772ea12ca929bf2836dc 296 PIRSF PIRSF003097 1 296 1.8E-85 T 23-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CLI_RS17390 5faa6d616a81772ea12ca929bf2836dc 296 Pfam PF02687 FtsX-like permease family 176 294 2.2E-14 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS17390 5faa6d616a81772ea12ca929bf2836dc 296 PANTHER PTHR30489 5 294 3.5E-48 T 23-04-2016 CLI_RS18770 ff5677c1c11151ecf4b5572a7517db3e 81 Pfam PF11823 Protein of unknown function (DUF3343) 3 71 3.8E-23 T 23-04-2016 IPR021778 Protein of unknown function DUF3343 CLI_RS11490 db5e8f34816f251f91713f2241eba050 140 ProSitePatterns PS00201 Flavodoxin signature. 3 19 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLI_RS11490 db5e8f34816f251f91713f2241eba050 140 SUPERFAMILY SSF52218 3 138 6.59E-35 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS11490 db5e8f34816f251f91713f2241eba050 140 Gene3D G3DSA:3.40.50.360 3 138 5.8E-42 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS11490 db5e8f34816f251f91713f2241eba050 140 Pfam PF00258 Flavodoxin 3 128 2.1E-20 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLI_RS11490 db5e8f34816f251f91713f2241eba050 140 PANTHER PTHR32145 3 137 7.3E-38 T 23-04-2016 CLI_RS11490 db5e8f34816f251f91713f2241eba050 140 TIGRFAM TIGR01753 flav_short: flavodoxin 2 136 9.0E-45 T 23-04-2016 IPR010087 Flavodoxin, short chain GO:0010181 CLI_RS11490 db5e8f34816f251f91713f2241eba050 140 PANTHER PTHR32145:SF19 3 137 7.3E-38 T 23-04-2016 CLI_RS17140 aedf70bb830d22db027cf784130815a6 552 Pfam PF00916 Sulfate permease family 22 385 4.8E-87 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CLI_RS17140 aedf70bb830d22db027cf784130815a6 552 Gene3D G3DSA:3.30.750.24 443 547 7.1E-12 T 23-04-2016 IPR002645 STAS domain CLI_RS17140 aedf70bb830d22db027cf784130815a6 552 PANTHER PTHR11814 19 548 9.3E-285 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 CLI_RS17140 aedf70bb830d22db027cf784130815a6 552 PANTHER PTHR11814:SF112 19 548 9.3E-285 T 23-04-2016 CLI_RS17140 aedf70bb830d22db027cf784130815a6 552 Pfam PF01740 STAS domain 443 542 2.5E-12 T 23-04-2016 IPR002645 STAS domain CLI_RS17140 aedf70bb830d22db027cf784130815a6 552 SUPERFAMILY SSF52091 442 546 2.55E-13 T 23-04-2016 IPR002645 STAS domain CLI_RS00890 44c1cb9c1479b501948d440d987c5634 226 Gene3D G3DSA:1.20.120.220 72 221 1.1E-32 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CLI_RS00890 44c1cb9c1479b501948d440d987c5634 226 Pfam PF00119 ATP synthase A chain 24 219 2.2E-46 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CLI_RS00890 44c1cb9c1479b501948d440d987c5634 226 PANTHER PTHR11410:SF7 3 218 3.1E-42 T 23-04-2016 CLI_RS00890 44c1cb9c1479b501948d440d987c5634 226 ProSitePatterns PS00449 ATP synthase a subunit signature. 158 167 - T 23-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site CLI_RS00890 44c1cb9c1479b501948d440d987c5634 226 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 25 219 1.1E-30 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CLI_RS00890 44c1cb9c1479b501948d440d987c5634 226 SUPERFAMILY SSF81336 72 219 1.83E-28 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CLI_RS00890 44c1cb9c1479b501948d440d987c5634 226 PRINTS PR00123 ATP synthase A subunit signature 207 222 1.2E-13 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CLI_RS00890 44c1cb9c1479b501948d440d987c5634 226 PRINTS PR00123 ATP synthase A subunit signature 139 154 1.2E-13 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CLI_RS00890 44c1cb9c1479b501948d440d987c5634 226 PRINTS PR00123 ATP synthase A subunit signature 80 96 1.2E-13 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CLI_RS00890 44c1cb9c1479b501948d440d987c5634 226 PRINTS PR00123 ATP synthase A subunit signature 155 177 1.2E-13 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CLI_RS00890 44c1cb9c1479b501948d440d987c5634 226 PANTHER PTHR11410 3 218 3.1E-42 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CLI_RS00890 44c1cb9c1479b501948d440d987c5634 226 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 226 12.275 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 323 2.0E-100 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 PANTHER PTHR30034 1 328 2.6E-139 T 23-04-2016 CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 Gene3D G3DSA:2.30.330.10 241 326 2.6E-17 T 23-04-2016 CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 PIRSF PIRSF002888 1 331 5.6E-116 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 2.4E-24 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 2.4E-24 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 2.4E-24 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 2.4E-24 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 323 3.0E-18 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 SUPERFAMILY SSF101801 252 326 1.96E-15 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 SUPERFAMILY SSF103039 45 229 2.88E-28 T 23-04-2016 IPR028976 CheC-like domain CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 PANTHER PTHR30034:SF0 1 328 2.6E-139 T 23-04-2016 CLI_RS13640 11a30ebbe957776d425df69aa3418a1d 331 Pfam PF02154 Flagellar motor switch protein FliM 39 229 3.4E-61 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLI_RS05185 b6633c842e496784be8b9ddfcba2dd63 722 PANTHER PTHR30294 1 224 1.3E-93 T 23-04-2016 CLI_RS05185 b6633c842e496784be8b9ddfcba2dd63 722 PANTHER PTHR30294 514 716 1.3E-93 T 23-04-2016 CLI_RS05185 b6633c842e496784be8b9ddfcba2dd63 722 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 499 702 1.4E-43 T 23-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal CLI_RS05185 b6633c842e496784be8b9ddfcba2dd63 722 Pfam PF12698 ABC-2 family transporter protein 25 224 7.2E-9 T 23-04-2016 CLI_RS05185 b6633c842e496784be8b9ddfcba2dd63 722 PANTHER PTHR30294:SF4 1 224 1.3E-93 T 23-04-2016 CLI_RS05185 b6633c842e496784be8b9ddfcba2dd63 722 PANTHER PTHR30294:SF4 514 716 1.3E-93 T 23-04-2016 CLI_RS05185 b6633c842e496784be8b9ddfcba2dd63 722 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 14 176 1.1E-46 T 23-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal CLI_RS16870 d5f54483e009543e1444e0eb428963de 249 PANTHER PTHR11807 1 244 2.4E-164 T 23-04-2016 CLI_RS16870 d5f54483e009543e1444e0eb428963de 249 Gene3D G3DSA:3.40.50.620 15 196 4.0E-22 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS16870 d5f54483e009543e1444e0eb428963de 249 PIRSF PIRSF004976 2 249 2.8E-59 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CLI_RS16870 d5f54483e009543e1444e0eb428963de 249 SUPERFAMILY SSF52402 8 222 6.84E-48 T 23-04-2016 CLI_RS16870 d5f54483e009543e1444e0eb428963de 249 Pfam PF01171 PP-loop family 31 211 8.3E-20 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CLI_RS16870 d5f54483e009543e1444e0eb428963de 249 PANTHER PTHR11807:SF22 1 244 2.4E-164 T 23-04-2016 CLI_RS18370 0239ec7463446080a5abe1216765e3ad 417 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.334 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS18370 0239ec7463446080a5abe1216765e3ad 417 SUPERFAMILY SSF55205 1 416 3.6E-134 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CLI_RS18370 0239ec7463446080a5abe1216765e3ad 417 Gene3D G3DSA:3.65.10.10 21 221 8.2E-60 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CLI_RS18370 0239ec7463446080a5abe1216765e3ad 417 Gene3D G3DSA:3.65.10.10 222 415 1.9E-62 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CLI_RS18370 0239ec7463446080a5abe1216765e3ad 417 PANTHER PTHR21090 1 416 1.5E-192 T 23-04-2016 CLI_RS18370 0239ec7463446080a5abe1216765e3ad 417 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 2.9E-96 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CLI_RS18370 0239ec7463446080a5abe1216765e3ad 417 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 5.6E-168 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 PANTHER PTHR11751:SF6 390 460 3.7E-239 T 23-04-2016 CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 PANTHER PTHR11751:SF6 86 355 3.7E-239 T 23-04-2016 CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 PANTHER PTHR11751:SF6 476 536 3.7E-239 T 23-04-2016 CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 325 338 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 Gene3D G3DSA:3.90.1150.10 395 536 7.2E-14 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 18 539 8.8E-271 T 23-04-2016 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 Pfam PF00155 Aminotransferase class I and II 165 521 1.5E-22 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 PANTHER PTHR11751 390 460 3.7E-239 T 23-04-2016 CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 PANTHER PTHR11751 86 355 3.7E-239 T 23-04-2016 CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 PANTHER PTHR11751 476 536 3.7E-239 T 23-04-2016 CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 Gene3D G3DSA:3.40.640.10 141 352 1.5E-33 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 SUPERFAMILY SSF53383 94 351 4.43E-42 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS06055 135dd7972573623b20c42cfe61f9a6c7 547 SUPERFAMILY SSF53383 388 534 4.43E-42 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS08450 c2edf154b72f1e4b1faf479275326913 452 Gene3D G3DSA:2.160.20.10 44 225 1.8E-12 T 23-04-2016 IPR012334 Pectin lyase fold CLI_RS08450 c2edf154b72f1e4b1faf479275326913 452 SUPERFAMILY SSF51126 43 209 2.13E-12 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor CLI_RS08450 c2edf154b72f1e4b1faf479275326913 452 SMART SM00635 287 364 4.9E-17 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 CLI_RS08450 c2edf154b72f1e4b1faf479275326913 452 Pfam PF02368 Bacterial Ig-like domain (group 2) 288 364 6.2E-17 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 CLI_RS08450 c2edf154b72f1e4b1faf479275326913 452 SUPERFAMILY SSF49373 286 367 3.4E-21 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments CLI_RS08450 c2edf154b72f1e4b1faf479275326913 452 Gene3D G3DSA:2.60.40.1080 286 368 2.8E-24 T 23-04-2016 CLI_RS16160 abd0ed323a4c0c07fe2e9dcd0b08b4d1 311 PANTHER PTHR33602 1 229 1.9E-49 T 23-04-2016 CLI_RS16160 abd0ed323a4c0c07fe2e9dcd0b08b4d1 311 Pfam PF02631 RecX family 235 304 1.1E-4 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 CLI_RS16160 abd0ed323a4c0c07fe2e9dcd0b08b4d1 311 Pfam PF02631 RecX family 88 205 4.7E-23 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 CLI_RS16160 abd0ed323a4c0c07fe2e9dcd0b08b4d1 311 PANTHER PTHR33602:SF1 1 229 1.9E-49 T 23-04-2016 CLI_RS16160 abd0ed323a4c0c07fe2e9dcd0b08b4d1 311 Hamap MF_01114 Regulatory protein RecX [recX]. 43 210 15.409 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 CLI_RS16515 6216f078c93069705f7ba142660e7238 382 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 38 382 1.7E-78 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS16515 6216f078c93069705f7ba142660e7238 382 PANTHER PTHR30548 1 382 4.1E-261 T 23-04-2016 CLI_RS16515 6216f078c93069705f7ba142660e7238 382 PANTHER PTHR30548:SF6 1 382 4.1E-261 T 23-04-2016 CLI_RS00085 ed643c6b53763673091f553fb27755f5 893 Pfam PF03699 Uncharacterised protein family (UPF0182) 10 767 2.3E-267 T 23-04-2016 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 CLI_RS00085 ed643c6b53763673091f553fb27755f5 893 PANTHER PTHR39344 1 893 0.0 T 23-04-2016 CLI_RS00085 ed643c6b53763673091f553fb27755f5 893 Hamap MF_01600 UPF0182 protein . 1 843 18.102 T 23-04-2016 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 CLI_RS05680 1fe180070e978e35267812d572d88bd8 155 Gene3D G3DSA:3.40.630.30 74 136 7.1E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05680 1fe180070e978e35267812d572d88bd8 155 Gene3D G3DSA:3.40.630.30 15 39 7.1E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05680 1fe180070e978e35267812d572d88bd8 155 SUPERFAMILY SSF55729 15 143 1.2E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05680 1fe180070e978e35267812d572d88bd8 155 Pfam PF00583 Acetyltransferase (GNAT) family 68 135 5.8E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS09910 7c1c5f3338d6956a51fcf877456615ea 695 PANTHER PTHR41775 13 695 2.1E-177 T 23-04-2016 CLI_RS09910 7c1c5f3338d6956a51fcf877456615ea 695 Gene3D G3DSA:3.40.390.10 278 364 1.2E-6 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CLI_RS09910 7c1c5f3338d6956a51fcf877456615ea 695 Gene3D G3DSA:2.10.10.20 650 694 1.5E-21 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS09910 7c1c5f3338d6956a51fcf877456615ea 695 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 150 432 1.0E-47 T 23-04-2016 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 CLI_RS09910 7c1c5f3338d6956a51fcf877456615ea 695 Pfam PF02839 Carbohydrate binding domain 650 691 6.8E-8 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS09910 7c1c5f3338d6956a51fcf877456615ea 695 SMART SM00495 648 694 5.7E-10 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS09910 7c1c5f3338d6956a51fcf877456615ea 695 SUPERFAMILY SSF51055 650 693 4.58E-14 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CLI_RS13700 ffc86fff63bd5a0c25009fca9393a094 277 Pfam PF01063 Amino-transferase class IV 31 242 4.1E-51 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CLI_RS13700 ffc86fff63bd5a0c25009fca9393a094 277 Gene3D G3DSA:3.20.10.10 116 266 2.7E-31 T 23-04-2016 CLI_RS13700 ffc86fff63bd5a0c25009fca9393a094 277 SUPERFAMILY SSF56752 28 258 3.01E-45 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CLI_RS13700 ffc86fff63bd5a0c25009fca9393a094 277 Gene3D G3DSA:3.30.470.10 17 92 3.0E-14 T 23-04-2016 CLI_RS13700 ffc86fff63bd5a0c25009fca9393a094 277 PANTHER PTHR11825:SF7 28 250 9.9E-53 T 23-04-2016 CLI_RS13700 ffc86fff63bd5a0c25009fca9393a094 277 PANTHER PTHR11825 28 250 9.9E-53 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CLI_RS13700 ffc86fff63bd5a0c25009fca9393a094 277 ProSitePatterns PS00770 Aminotransferases class-IV signature. 169 197 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 CLI_RS03780 c434bd744728ceefd32966030087274e 70 PANTHER PTHR33055 1 66 7.3E-14 T 23-04-2016 CLI_RS03780 c434bd744728ceefd32966030087274e 70 PANTHER PTHR33055:SF3 1 66 7.3E-14 T 23-04-2016 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 SUPERFAMILY SSF51905 98 261 2.2E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 SUPERFAMILY SSF51905 7 67 2.2E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 623 41.964 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 Pfam PF13932 GidA associated domain 401 615 1.8E-71 T 23-04-2016 IPR026904 GidA associated domain 3 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 Pfam PF01134 Glucose inhibited division protein A 9 398 9.6E-163 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 PANTHER PTHR11806:SF0 7 625 0.0 T 23-04-2016 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 8.8E-6 T 23-04-2016 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 8.8E-6 T 23-04-2016 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 PANTHER PTHR11806 7 625 0.0 T 23-04-2016 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 SMART SM01228 545 616 1.8E-40 T 23-04-2016 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 Gene3D G3DSA:3.50.50.60 7 224 6.0E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 621 9.6E-268 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 23-04-2016 IPR020595 MnmG-related, conserved site CLI_RS18820 00527964405ccf2d28718f15f0d3dcc0 625 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 23-04-2016 IPR020595 MnmG-related, conserved site CLI_RS10640 941022a04e41bd3425ce3b1db17c0352 299 Pfam PF13673 Acetyltransferase (GNAT) domain 186 282 8.3E-9 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS10640 941022a04e41bd3425ce3b1db17c0352 299 Pfam PF12802 MarR family 28 86 2.1E-10 T 23-04-2016 CLI_RS10640 941022a04e41bd3425ce3b1db17c0352 299 PANTHER PTHR23091 120 288 6.0E-56 T 23-04-2016 CLI_RS10640 941022a04e41bd3425ce3b1db17c0352 299 PANTHER PTHR23091:SF248 120 288 6.0E-56 T 23-04-2016 CLI_RS10640 941022a04e41bd3425ce3b1db17c0352 299 Gene3D G3DSA:1.10.10.10 28 117 5.3E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10640 941022a04e41bd3425ce3b1db17c0352 299 SUPERFAMILY SSF46785 21 116 3.11E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10640 941022a04e41bd3425ce3b1db17c0352 299 SUPERFAMILY SSF55729 154 286 1.77E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS10640 941022a04e41bd3425ce3b1db17c0352 299 Gene3D G3DSA:3.40.630.30 149 287 3.6E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS10640 941022a04e41bd3425ce3b1db17c0352 299 SMART SM00347 23 125 1.6E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS12805 30d148a4741e607ee94b36f3a4fddeed 569 PIRSF PIRSF004803 13 569 1.8E-245 T 23-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CLI_RS12805 30d148a4741e607ee94b36f3a4fddeed 569 Hamap MF_01491 Ribonuclease J [rnj]. 17 569 48.385 T 23-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CLI_RS12805 30d148a4741e607ee94b36f3a4fddeed 569 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 378 406 - T 23-04-2016 IPR001587 Ribonuclease J, conserved site CLI_RS12805 30d148a4741e607ee94b36f3a4fddeed 569 PANTHER PTHR11203:SF22 13 569 4.5E-259 T 23-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CLI_RS12805 30d148a4741e607ee94b36f3a4fddeed 569 Gene3D G3DSA:3.60.15.10 18 269 2.3E-80 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS12805 30d148a4741e607ee94b36f3a4fddeed 569 SUPERFAMILY SSF56281 22 437 1.18E-97 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS12805 30d148a4741e607ee94b36f3a4fddeed 569 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 22 567 9.0E-205 T 23-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CLI_RS12805 30d148a4741e607ee94b36f3a4fddeed 569 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 368 417 3.6E-10 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CLI_RS12805 30d148a4741e607ee94b36f3a4fddeed 569 Pfam PF00753 Metallo-beta-lactamase superfamily 35 178 1.6E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS12805 30d148a4741e607ee94b36f3a4fddeed 569 SMART SM00849 34 229 3.3E-23 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS12805 30d148a4741e607ee94b36f3a4fddeed 569 PANTHER PTHR11203 13 569 4.5E-259 T 23-04-2016 CLI_RS06435 07f2395cb620c0c5a2b3d555a3db206e 195 Gene3D G3DSA:1.10.357.10 10 170 7.9E-16 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS06435 07f2395cb620c0c5a2b3d555a3db206e 195 PANTHER PTHR30055:SF59 5 171 3.7E-80 T 23-04-2016 CLI_RS06435 07f2395cb620c0c5a2b3d555a3db206e 195 PANTHER PTHR30055 5 171 3.7E-80 T 23-04-2016 CLI_RS06435 07f2395cb620c0c5a2b3d555a3db206e 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 63 4.4E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS06435 07f2395cb620c0c5a2b3d555a3db206e 195 SUPERFAMILY SSF46689 9 83 3.85E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS12905 92a5ff0cfe97736daee0e78509da6564 158 Pfam PF07833 Copper amine oxidase N-terminal domain 64 156 2.0E-14 T 23-04-2016 IPR012854 Copper amine oxidase-like, N-terminal CLI_RS12905 92a5ff0cfe97736daee0e78509da6564 158 Gene3D G3DSA:3.30.457.10 68 146 3.1E-5 T 23-04-2016 IPR012854 Copper amine oxidase-like, N-terminal CLI_RS10365 c87920eefb55d59e3ad24580f734f7ff 326 Gene3D G3DSA:3.90.25.10 190 325 3.7E-49 T 23-04-2016 CLI_RS10365 c87920eefb55d59e3ad24580f734f7ff 326 PANTHER PTHR10366 3 326 7.0E-188 T 23-04-2016 CLI_RS10365 c87920eefb55d59e3ad24580f734f7ff 326 PANTHER PTHR10366:SF437 3 326 7.0E-188 T 23-04-2016 CLI_RS10365 c87920eefb55d59e3ad24580f734f7ff 326 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 325 5.9E-141 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CLI_RS10365 c87920eefb55d59e3ad24580f734f7ff 326 SUPERFAMILY SSF51735 1 325 1.41E-90 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS10365 c87920eefb55d59e3ad24580f734f7ff 326 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 313 5.0E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS10365 c87920eefb55d59e3ad24580f734f7ff 326 Gene3D G3DSA:3.40.50.720 1 189 1.1E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS17845 bcf3b02927b249e48e3ad930c34eb497 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.3E-45 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CLI_RS17845 bcf3b02927b249e48e3ad930c34eb497 102 SUPERFAMILY SSF54999 5 102 9.16E-38 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CLI_RS17845 bcf3b02927b249e48e3ad930c34eb497 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 9.0E-35 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CLI_RS17845 bcf3b02927b249e48e3ad930c34eb497 102 PANTHER PTHR11700 1 102 5.0E-51 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CLI_RS17845 bcf3b02927b249e48e3ad930c34eb497 102 SMART SM01403 7 101 4.4E-57 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CLI_RS17845 bcf3b02927b249e48e3ad930c34eb497 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.3E-19 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CLI_RS17845 bcf3b02927b249e48e3ad930c34eb497 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.3E-19 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CLI_RS17845 bcf3b02927b249e48e3ad930c34eb497 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.3E-19 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CLI_RS17845 bcf3b02927b249e48e3ad930c34eb497 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.709 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CLI_RS17845 bcf3b02927b249e48e3ad930c34eb497 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 23-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17845 bcf3b02927b249e48e3ad930c34eb497 102 Gene3D G3DSA:3.30.70.600 4 102 1.1E-43 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CLI_RS12375 17d15a6b00d1e4eb1b1af00f85351c05 258 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 9 252 1.9E-7 T 23-04-2016 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 CLI_RS12375 17d15a6b00d1e4eb1b1af00f85351c05 258 TIGRFAM TIGR04482 D_pro_red_PrdD: proline reductase cluster protein PrdD 8 258 2.7E-118 T 23-04-2016 IPR031000 Proline reductase cluster protein PrdD CLI_RS11760 8244dfb565215d12aff7caa13feb3551 436 ProDom PD032508 PHAGE-LIKE PBSX XKDK ELEMENT PHAGE LIN1278 SHEATH YQBL RELATED TAIL 311 436 2.0E-21 T 23-04-2016 IPR020287 Tail sheath protein, C-terminal domain CLI_RS11760 8244dfb565215d12aff7caa13feb3551 436 Pfam PF04984 Phage tail sheath protein 7 435 1.3E-103 T 23-04-2016 IPR007067 Tail sheath protein CLI_RS02985 c4c11f3665aee53e2c6ed14705d1f5ec 663 Gene3D G3DSA:1.10.287.950 402 561 2.6E-45 T 23-04-2016 CLI_RS02985 c4c11f3665aee53e2c6ed14705d1f5ec 663 Gene3D G3DSA:1.10.287.950 604 650 2.6E-45 T 23-04-2016 CLI_RS02985 c4c11f3665aee53e2c6ed14705d1f5ec 663 SUPERFAMILY SSF103190 87 190 1.18E-11 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS02985 c4c11f3665aee53e2c6ed14705d1f5ec 663 SMART SM00283 387 662 5.0E-52 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS02985 c4c11f3665aee53e2c6ed14705d1f5ec 663 Gene3D G3DSA:3.30.450.20 147 279 4.7E-27 T 23-04-2016 CLI_RS02985 c4c11f3665aee53e2c6ed14705d1f5ec 663 SUPERFAMILY SSF58104 387 662 1.31E-58 T 23-04-2016 CLI_RS02985 c4c11f3665aee53e2c6ed14705d1f5ec 663 PANTHER PTHR32089 1 663 6.6E-194 T 23-04-2016 CLI_RS02985 c4c11f3665aee53e2c6ed14705d1f5ec 663 Pfam PF02743 Cache domain 42 265 8.3E-35 T 23-04-2016 IPR033479 Double Cache domain 1 CLI_RS02985 c4c11f3665aee53e2c6ed14705d1f5ec 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 415 444 2.0E-5 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS02985 c4c11f3665aee53e2c6ed14705d1f5ec 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 514 543 2.0E-5 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS02985 c4c11f3665aee53e2c6ed14705d1f5ec 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 456 638 1.6E-39 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS02985 c4c11f3665aee53e2c6ed14705d1f5ec 663 PANTHER PTHR32089:SF1 1 663 6.6E-194 T 23-04-2016 CLI_RS10050 2dd37492a4780a5bcfd48c114a5d9773 521 PANTHER PTHR11361 234 521 2.7E-55 T 23-04-2016 CLI_RS10050 2dd37492a4780a5bcfd48c114a5d9773 521 Pfam PF00488 MutS domain V 333 517 1.3E-25 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS10050 2dd37492a4780a5bcfd48c114a5d9773 521 SUPERFAMILY SSF48334 55 285 7.59E-7 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLI_RS10050 2dd37492a4780a5bcfd48c114a5d9773 521 Gene3D G3DSA:3.40.50.300 296 517 7.2E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10050 2dd37492a4780a5bcfd48c114a5d9773 521 Gene3D G3DSA:1.10.1420.10 54 123 4.9E-6 T 23-04-2016 CLI_RS10050 2dd37492a4780a5bcfd48c114a5d9773 521 Gene3D G3DSA:1.10.1420.10 178 206 4.9E-6 T 23-04-2016 CLI_RS10050 2dd37492a4780a5bcfd48c114a5d9773 521 SMART SM00534 329 515 6.7E-11 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLI_RS10050 2dd37492a4780a5bcfd48c114a5d9773 521 SUPERFAMILY SSF52540 296 518 1.05E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10050 2dd37492a4780a5bcfd48c114a5d9773 521 SMART SM00533 49 320 0.0067 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLI_RS16455 d9e998400231626e5589ff3c98dadb11 261 PANTHER PTHR12110:SF17 1 260 5.2E-67 T 23-04-2016 CLI_RS16455 d9e998400231626e5589ff3c98dadb11 261 Pfam PF01261 Xylose isomerase-like TIM barrel 23 204 1.2E-15 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS16455 d9e998400231626e5589ff3c98dadb11 261 Gene3D G3DSA:3.20.20.150 1 260 1.3E-36 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS16455 d9e998400231626e5589ff3c98dadb11 261 PANTHER PTHR12110 1 260 5.2E-67 T 23-04-2016 CLI_RS16455 d9e998400231626e5589ff3c98dadb11 261 SUPERFAMILY SSF51658 1 257 8.05E-44 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS15470 9c52fbbc84fae281ced5bdf361857d05 435 Pfam PF13440 Polysaccharide biosynthesis protein 27 318 1.3E-15 T 23-04-2016 CLI_RS15470 9c52fbbc84fae281ced5bdf361857d05 435 PANTHER PTHR30250 5 420 8.9E-28 T 23-04-2016 CLI_RS15470 9c52fbbc84fae281ced5bdf361857d05 435 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 323 405 3.1E-16 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLI_RS14765 b3375e1f7e466eb25b3a6313f46a4358 88 Gene3D G3DSA:1.20.58.110 1 86 3.8E-29 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14765 b3375e1f7e466eb25b3a6313f46a4358 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 5.3E-25 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14765 b3375e1f7e466eb25b3a6313f46a4358 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 19 88 8.0E-17 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14765 b3375e1f7e466eb25b3a6313f46a4358 88 Pfam PF01649 Ribosomal protein S20 2 84 2.1E-27 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14765 b3375e1f7e466eb25b3a6313f46a4358 88 PANTHER PTHR33398 1 86 1.9E-33 T 23-04-2016 CLI_RS14765 b3375e1f7e466eb25b3a6313f46a4358 88 SUPERFAMILY SSF46992 3 86 8.76E-28 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14765 b3375e1f7e466eb25b3a6313f46a4358 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.305 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS13670 4d3eeb5819d474071a4840d84d520a42 354 Gene3D G3DSA:3.40.50.2300 2 131 3.4E-33 T 23-04-2016 CLI_RS13670 4d3eeb5819d474071a4840d84d520a42 354 SUPERFAMILY SSF52172 2 111 3.7E-29 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS13670 4d3eeb5819d474071a4840d84d520a42 354 PANTHER PTHR24421:SF16 2 351 7.9E-156 T 23-04-2016 CLI_RS13670 4d3eeb5819d474071a4840d84d520a42 354 SMART SM00448 4 128 1.5E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS13670 4d3eeb5819d474071a4840d84d520a42 354 Pfam PF00072 Response regulator receiver domain 6 112 4.6E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS13670 4d3eeb5819d474071a4840d84d520a42 354 PANTHER PTHR24421 2 351 7.9E-156 T 23-04-2016 CLI_RS13670 4d3eeb5819d474071a4840d84d520a42 354 PIRSF PIRSF000876 1 354 3.6E-126 T 23-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLI_RS13670 4d3eeb5819d474071a4840d84d520a42 354 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 354 37.118 T 23-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLI_RS13670 4d3eeb5819d474071a4840d84d520a42 354 Gene3D G3DSA:3.40.50.180 166 352 2.4E-71 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLI_RS13670 4d3eeb5819d474071a4840d84d520a42 354 SUPERFAMILY SSF52738 170 352 3.79E-61 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLI_RS13670 4d3eeb5819d474071a4840d84d520a42 354 Pfam PF01339 CheB methylesterase 174 349 2.2E-59 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLI_RS15740 57348936ecda3a47b7fb9c7ec8d74a88 251 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 114 246 3.0E-43 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS15740 57348936ecda3a47b7fb9c7ec8d74a88 251 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 136 153 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS15740 57348936ecda3a47b7fb9c7ec8d74a88 251 Gene3D G3DSA:3.40.50.720 3 120 1.3E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15740 57348936ecda3a47b7fb9c7ec8d74a88 251 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 247 3.4E-66 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS15740 57348936ecda3a47b7fb9c7ec8d74a88 251 Gene3D G3DSA:3.30.360.10 121 216 1.4E-35 T 23-04-2016 CLI_RS15740 57348936ecda3a47b7fb9c7ec8d74a88 251 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 248 30.97 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS15740 57348936ecda3a47b7fb9c7ec8d74a88 251 PIRSF PIRSF000161 1 250 6.1E-83 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS15740 57348936ecda3a47b7fb9c7ec8d74a88 251 PANTHER PTHR20836 1 249 2.7E-63 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS15740 57348936ecda3a47b7fb9c7ec8d74a88 251 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 111 1.6E-28 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS15740 57348936ecda3a47b7fb9c7ec8d74a88 251 SUPERFAMILY SSF55347 113 219 2.83E-31 T 23-04-2016 CLI_RS15740 57348936ecda3a47b7fb9c7ec8d74a88 251 SUPERFAMILY SSF51735 219 248 5.82E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS15740 57348936ecda3a47b7fb9c7ec8d74a88 251 SUPERFAMILY SSF51735 1 112 5.82E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS07960 6d3ca6f353d165b82e9f6549032d7a21 329 Pfam PF12698 ABC-2 family transporter protein 60 317 1.3E-15 T 23-04-2016 CLI_RS18745 7b64796cd5658b433dcf938bd7840960 148 PIRSF PIRSF002070 1 147 1.2E-38 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CLI_RS18745 7b64796cd5658b433dcf938bd7840960 148 Gene3D G3DSA:2.40.50.140 1 138 2.7E-42 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS18745 7b64796cd5658b433dcf938bd7840960 148 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 125 1.3E-36 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CLI_RS18745 7b64796cd5658b433dcf938bd7840960 148 Hamap MF_00984 Single-stranded DNA-binding protein. 1 106 34.547 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CLI_RS18745 7b64796cd5658b433dcf938bd7840960 148 SUPERFAMILY SSF50249 1 148 5.14E-48 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS18745 7b64796cd5658b433dcf938bd7840960 148 PANTHER PTHR10302 1 137 1.4E-43 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CLI_RS18745 7b64796cd5658b433dcf938bd7840960 148 Pfam PF00436 Single-strand binding protein family 1 102 4.9E-36 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 CLI_RS05760 1d2b57cb2c944316b0a8abca41458427 214 TIGRFAM TIGR00277 HDIG: HDIG domain 66 124 4.6E-8 T 23-04-2016 IPR006675 HDIG domain CLI_RS05760 1d2b57cb2c944316b0a8abca41458427 214 Gene3D G3DSA:1.10.3210.10 56 194 7.8E-16 T 23-04-2016 IPR006674 HD domain CLI_RS05760 1d2b57cb2c944316b0a8abca41458427 214 SUPERFAMILY SSF109604 29 206 1.26E-18 T 23-04-2016 CLI_RS05760 1d2b57cb2c944316b0a8abca41458427 214 Pfam PF01966 HD domain 68 186 4.2E-10 T 23-04-2016 IPR006674 HD domain CLI_RS05760 1d2b57cb2c944316b0a8abca41458427 214 SMART SM00471 63 198 5.6E-4 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS08090 38723fa248daf28be7c69d1a5ee5638c 110 SUPERFAMILY SSF101386 5 94 5.98E-26 T 23-04-2016 CLI_RS08090 38723fa248daf28be7c69d1a5ee5638c 110 PANTHER PTHR21256 5 110 1.8E-43 T 23-04-2016 CLI_RS08090 38723fa248daf28be7c69d1a5ee5638c 110 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 13 93 4.0E-16 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CLI_RS08090 38723fa248daf28be7c69d1a5ee5638c 110 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 8 90 1.2E-31 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CLI_RS08090 38723fa248daf28be7c69d1a5ee5638c 110 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 4 90 21.07 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CLI_RS03980 7e16e06d39db404769d41587fef34cf6 276 Gene3D G3DSA:3.60.21.10 38 212 2.6E-17 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS03980 7e16e06d39db404769d41587fef34cf6 276 SUPERFAMILY SSF56300 37 212 1.23E-18 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS03980 7e16e06d39db404769d41587fef34cf6 276 Pfam PF00149 Calcineurin-like phosphoesterase 38 196 5.8E-12 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CLI_RS13075 c1894195963d3d1b0e5eedf290c8f55a 332 Gene3D G3DSA:3.90.1200.10 114 249 3.2E-6 T 23-04-2016 CLI_RS13075 c1894195963d3d1b0e5eedf290c8f55a 332 Gene3D G3DSA:3.30.200.20 65 107 1.6E-4 T 23-04-2016 CLI_RS13075 c1894195963d3d1b0e5eedf290c8f55a 332 Pfam PF01636 Phosphotransferase enzyme family 31 240 4.3E-11 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase CLI_RS13075 c1894195963d3d1b0e5eedf290c8f55a 332 SUPERFAMILY SSF56112 19 292 5.7E-19 T 23-04-2016 IPR011009 Protein kinase-like domain CLI_RS03600 a62289840e88a8002afb2c8dd0a2e07e 250 SUPERFAMILY SSF69318 25 135 5.49E-9 T 23-04-2016 CLI_RS03600 a62289840e88a8002afb2c8dd0a2e07e 250 SUPERFAMILY SSF69318 191 210 5.49E-9 T 23-04-2016 CLI_RS11570 d4fc3fe35e4972b5634ff8d40a9208e4 64 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 4 62 7.4E-29 T 23-04-2016 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLI_RS11570 d4fc3fe35e4972b5634ff8d40a9208e4 64 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 23-04-2016 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLI_RS11570 d4fc3fe35e4972b5634ff8d40a9208e4 64 PANTHER PTHR36107 2 64 5.4E-21 T 23-04-2016 CLI_RS07845 111bedf8b3abce97cac17404f2325751 155 SMART SM00347 33 133 3.5E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS07845 111bedf8b3abce97cac17404f2325751 155 Gene3D G3DSA:1.10.10.10 9 149 7.6E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07845 111bedf8b3abce97cac17404f2325751 155 SUPERFAMILY SSF46785 16 147 6.45E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07845 111bedf8b3abce97cac17404f2325751 155 Pfam PF01047 MarR family 42 97 1.6E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS17210 1e19ca4a576e682546d172a1ff3f57fe 437 SUPERFAMILY SSF103190 157 230 3.61E-9 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS17210 1e19ca4a576e682546d172a1ff3f57fe 437 SUPERFAMILY SSF103190 45 111 3.61E-9 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS17210 1e19ca4a576e682546d172a1ff3f57fe 437 SUPERFAMILY SSF55073 272 434 6.28E-40 T 23-04-2016 IPR029787 Nucleotide cyclase CLI_RS17210 1e19ca4a576e682546d172a1ff3f57fe 437 SMART SM00267 257 432 2.1E-44 T 23-04-2016 IPR000160 GGDEF domain CLI_RS17210 1e19ca4a576e682546d172a1ff3f57fe 437 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 427 1.7E-42 T 23-04-2016 IPR000160 GGDEF domain CLI_RS17210 1e19ca4a576e682546d172a1ff3f57fe 437 Gene3D G3DSA:3.30.70.270 271 435 3.4E-43 T 23-04-2016 CLI_RS17210 1e19ca4a576e682546d172a1ff3f57fe 437 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 271 430 7.8E-43 T 23-04-2016 IPR000160 GGDEF domain CLI_RS17210 1e19ca4a576e682546d172a1ff3f57fe 437 PANTHER PTHR10799:SF728 22 221 6.9E-20 T 23-04-2016 CLI_RS17210 1e19ca4a576e682546d172a1ff3f57fe 437 PANTHER PTHR10799:SF728 300 429 6.9E-20 T 23-04-2016 CLI_RS17210 1e19ca4a576e682546d172a1ff3f57fe 437 PANTHER PTHR10799 22 221 6.9E-20 T 23-04-2016 CLI_RS17210 1e19ca4a576e682546d172a1ff3f57fe 437 PANTHER PTHR10799 300 429 6.9E-20 T 23-04-2016 CLI_RS15350 e69aefe8b03085da6fd6e9bbb1d8de57 174 SUPERFAMILY SSF53271 6 173 6.16E-56 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS15350 e69aefe8b03085da6fd6e9bbb1d8de57 174 Gene3D G3DSA:3.40.50.2020 1 173 2.1E-71 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS15350 e69aefe8b03085da6fd6e9bbb1d8de57 174 PANTHER PTHR22573 6 174 1.8E-70 T 23-04-2016 CLI_RS15350 e69aefe8b03085da6fd6e9bbb1d8de57 174 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 170 9.2E-59 T 23-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 CLI_RS15350 e69aefe8b03085da6fd6e9bbb1d8de57 174 Pfam PF00156 Phosphoribosyl transferase domain 13 158 9.9E-28 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS15350 e69aefe8b03085da6fd6e9bbb1d8de57 174 PANTHER PTHR22573:SF56 6 174 1.8E-70 T 23-04-2016 CLI_RS11875 3f7d1cba0b11140c1de8f83517f31a59 654 Gene3D G3DSA:3.30.70.370 324 399 1.7E-12 T 23-04-2016 CLI_RS11875 3f7d1cba0b11140c1de8f83517f31a59 654 Gene3D G3DSA:3.30.70.370 564 621 1.7E-12 T 23-04-2016 CLI_RS11875 3f7d1cba0b11140c1de8f83517f31a59 654 Pfam PF00476 DNA polymerase family A 225 629 2.8E-28 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS11875 3f7d1cba0b11140c1de8f83517f31a59 654 SUPERFAMILY SSF56672 376 652 1.78E-81 T 23-04-2016 CLI_RS11875 3f7d1cba0b11140c1de8f83517f31a59 654 SUPERFAMILY SSF56672 192 347 1.78E-81 T 23-04-2016 CLI_RS11875 3f7d1cba0b11140c1de8f83517f31a59 654 SUPERFAMILY SSF53098 34 114 5.01E-5 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS11875 3f7d1cba0b11140c1de8f83517f31a59 654 Gene3D G3DSA:1.10.150.20 400 563 2.7E-22 T 23-04-2016 CLI_RS11875 3f7d1cba0b11140c1de8f83517f31a59 654 PANTHER PTHR10133 370 524 1.5E-36 T 23-04-2016 CLI_RS11875 3f7d1cba0b11140c1de8f83517f31a59 654 PANTHER PTHR10133 1 341 1.5E-36 T 23-04-2016 CLI_RS11875 3f7d1cba0b11140c1de8f83517f31a59 654 PANTHER PTHR10133 566 642 1.5E-36 T 23-04-2016 CLI_RS11875 3f7d1cba0b11140c1de8f83517f31a59 654 SMART SM00482 373 619 6.5E-32 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS18810 172405dca79ff6039ad0adf14f57f8d0 259 PANTHER PTHR33375 2 257 1.9E-88 T 23-04-2016 CLI_RS18810 172405dca79ff6039ad0adf14f57f8d0 259 Pfam PF02195 ParB-like nuclease domain 7 95 2.2E-24 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CLI_RS18810 172405dca79ff6039ad0adf14f57f8d0 259 SUPERFAMILY SSF110849 5 135 8.89E-33 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CLI_RS18810 172405dca79ff6039ad0adf14f57f8d0 259 Gene3D G3DSA:3.90.1530.10 2 102 3.8E-39 T 23-04-2016 CLI_RS18810 172405dca79ff6039ad0adf14f57f8d0 259 SMART SM00470 6 96 8.1E-31 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CLI_RS18810 172405dca79ff6039ad0adf14f57f8d0 259 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 2 181 1.9E-53 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CLI_RS18810 172405dca79ff6039ad0adf14f57f8d0 259 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 5 258 2.2E-95 T 23-04-2016 IPR023705 Nucleoid occlusion protein CLI_RS11140 e32d92e8d0824e4c4999c35885a322bc 254 Pfam PF00691 OmpA family 129 228 1.0E-18 T 23-04-2016 IPR006665 OmpA-like domain CLI_RS11140 e32d92e8d0824e4c4999c35885a322bc 254 PANTHER PTHR30329:SF4 1 253 6.5E-88 T 23-04-2016 CLI_RS11140 e32d92e8d0824e4c4999c35885a322bc 254 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 197 216 6.0E-6 T 23-04-2016 CLI_RS11140 e32d92e8d0824e4c4999c35885a322bc 254 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 217 237 6.0E-6 T 23-04-2016 CLI_RS11140 e32d92e8d0824e4c4999c35885a322bc 254 Gene3D G3DSA:3.30.1330.60 109 234 7.1E-31 T 23-04-2016 IPR006665 OmpA-like domain CLI_RS11140 e32d92e8d0824e4c4999c35885a322bc 254 PANTHER PTHR30329 1 253 6.5E-88 T 23-04-2016 CLI_RS11140 e32d92e8d0824e4c4999c35885a322bc 254 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 53 2.3E-19 T 23-04-2016 IPR025713 Motility protein B, N-terminal domain CLI_RS11140 e32d92e8d0824e4c4999c35885a322bc 254 SUPERFAMILY SSF103088 117 234 2.88E-29 T 23-04-2016 IPR006665 OmpA-like domain CLI_RS00625 6535e490ae661fa1b1bbc77902853e79 212 SUPERFAMILY SSF56281 1 185 4.22E-23 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS00625 6535e490ae661fa1b1bbc77902853e79 212 PANTHER PTHR15032 1 212 2.2E-84 T 23-04-2016 CLI_RS00625 6535e490ae661fa1b1bbc77902853e79 212 PANTHER PTHR15032:SF19 1 212 2.2E-84 T 23-04-2016 CLI_RS00625 6535e490ae661fa1b1bbc77902853e79 212 Pfam PF13483 Beta-lactamase superfamily domain 2 162 3.2E-44 T 23-04-2016 CLI_RS00625 6535e490ae661fa1b1bbc77902853e79 212 Gene3D G3DSA:3.60.15.10 1 183 2.4E-42 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05005 6f4d300250da92359abb71ffb729208a 238 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 21 222 7.4E-41 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS05005 6f4d300250da92359abb71ffb729208a 238 PANTHER PTHR10882:SF1 21 238 1.4E-35 T 23-04-2016 CLI_RS05005 6f4d300250da92359abb71ffb729208a 238 PIRSF PIRSF036427 18 238 3.0E-61 T 23-04-2016 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 CLI_RS05005 6f4d300250da92359abb71ffb729208a 238 Gene3D G3DSA:3.40.1010.10 20 142 5.5E-31 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CLI_RS05005 6f4d300250da92359abb71ffb729208a 238 SUPERFAMILY SSF53790 20 236 6.8E-44 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CLI_RS05005 6f4d300250da92359abb71ffb729208a 238 PANTHER PTHR10882 21 238 1.4E-35 T 23-04-2016 CLI_RS05005 6f4d300250da92359abb71ffb729208a 238 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 20 236 5.4E-53 T 23-04-2016 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 CLI_RS02265 788e6515c6df84698476ff6766c4b754 242 PANTHER PTHR21343 1 239 1.6E-119 T 23-04-2016 CLI_RS02265 788e6515c6df84698476ff6766c4b754 242 PANTHER PTHR21343:SF9 1 239 1.6E-119 T 23-04-2016 CLI_RS02265 788e6515c6df84698476ff6766c4b754 242 SUPERFAMILY SSF52317 14 192 2.15E-27 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS02265 788e6515c6df84698476ff6766c4b754 242 Gene3D G3DSA:3.40.50.880 36 211 1.4E-13 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS02265 788e6515c6df84698476ff6766c4b754 242 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 4 198 6.1E-45 T 23-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 CLI_RS04375 2631f7ad5960beb89b6a03d6457748a4 261 Gene3D G3DSA:3.20.20.20 1 260 4.0E-109 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CLI_RS04375 2631f7ad5960beb89b6a03d6457748a4 261 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 257 1.5E-105 T 23-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 CLI_RS04375 2631f7ad5960beb89b6a03d6457748a4 261 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CLI_RS04375 2631f7ad5960beb89b6a03d6457748a4 261 PANTHER PTHR20941:SF1 1 261 7.2E-123 T 23-04-2016 CLI_RS04375 2631f7ad5960beb89b6a03d6457748a4 261 Pfam PF00809 Pterin binding enzyme 1 243 1.3E-89 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CLI_RS04375 2631f7ad5960beb89b6a03d6457748a4 261 SUPERFAMILY SSF51717 1 260 1.22E-98 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 CLI_RS04375 2631f7ad5960beb89b6a03d6457748a4 261 PANTHER PTHR20941 1 261 7.2E-123 T 23-04-2016 CLI_RS07610 7c12cf9b15a795e24bc7b383aa67ca73 305 SMART SM00363 15 74 1.4E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS07610 7c12cf9b15a795e24bc7b383aa67ca73 305 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 300 9.7E-101 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS07610 7c12cf9b15a795e24bc7b383aa67ca73 305 Pfam PF00849 RNA pseudouridylate synthase 88 242 6.4E-38 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS07610 7c12cf9b15a795e24bc7b383aa67ca73 305 SUPERFAMILY SSF55120 74 301 7.2E-81 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS07610 7c12cf9b15a795e24bc7b383aa67ca73 305 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLI_RS07610 7c12cf9b15a795e24bc7b383aa67ca73 305 PANTHER PTHR11079:SF73 2 303 4.0E-147 T 23-04-2016 CLI_RS07610 7c12cf9b15a795e24bc7b383aa67ca73 305 SUPERFAMILY SSF55174 14 101 4.37E-11 T 23-04-2016 CLI_RS07610 7c12cf9b15a795e24bc7b383aa67ca73 305 PANTHER PTHR11079 2 303 4.0E-147 T 23-04-2016 CLI_RS07610 7c12cf9b15a795e24bc7b383aa67ca73 305 Pfam PF01479 S4 domain 15 61 3.9E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS07610 7c12cf9b15a795e24bc7b383aa67ca73 305 Gene3D G3DSA:3.10.290.10 15 64 4.1E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS14300 0955c9716f48f2a5afed742e00772954 476 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 8 456 2.7E-148 T 23-04-2016 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLI_RS14300 0955c9716f48f2a5afed742e00772954 476 PANTHER PTHR22550 7 450 2.8E-98 T 23-04-2016 CLI_RS14300 0955c9716f48f2a5afed742e00772954 476 PIRSF PIRSF005690 2 476 6.8E-148 T 23-04-2016 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLI_RS14300 0955c9716f48f2a5afed742e00772954 476 PANTHER PTHR22550:SF7 7 450 2.8E-98 T 23-04-2016 CLI_RS04215 2c583be4ea9e997c423d619b1badfa2f 265 Gene3D G3DSA:3.40.50.720 1 163 1.4E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS04215 2c583be4ea9e997c423d619b1badfa2f 265 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 124 4.2E-36 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS04215 2c583be4ea9e997c423d619b1badfa2f 265 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 264 29.049 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS04215 2c583be4ea9e997c423d619b1badfa2f 265 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 263 4.4E-36 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS04215 2c583be4ea9e997c423d619b1badfa2f 265 PANTHER PTHR20836:SF0 1 265 3.2E-88 T 23-04-2016 CLI_RS04215 2c583be4ea9e997c423d619b1badfa2f 265 SUPERFAMILY SSF55347 129 234 1.57E-27 T 23-04-2016 CLI_RS04215 2c583be4ea9e997c423d619b1badfa2f 265 PIRSF PIRSF000161 1 265 1.6E-72 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS04215 2c583be4ea9e997c423d619b1badfa2f 265 PANTHER PTHR20836 1 265 3.2E-88 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS04215 2c583be4ea9e997c423d619b1badfa2f 265 SUPERFAMILY SSF51735 1 126 1.9E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS04215 2c583be4ea9e997c423d619b1badfa2f 265 SUPERFAMILY SSF51735 235 265 1.9E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS04215 2c583be4ea9e997c423d619b1badfa2f 265 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS04215 2c583be4ea9e997c423d619b1badfa2f 265 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 264 1.2E-76 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS01805 2a1fb8ddda5e72053b4218e5bcc06549 248 SMART SM00382 31 218 1.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS01805 2a1fb8ddda5e72053b4218e5bcc06549 248 Pfam PF00005 ABC transporter 22 170 2.1E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS01805 2a1fb8ddda5e72053b4218e5bcc06549 248 SUPERFAMILY SSF52540 3 225 3.03E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01805 2a1fb8ddda5e72053b4218e5bcc06549 248 Gene3D G3DSA:3.40.50.300 2 223 6.3E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01805 2a1fb8ddda5e72053b4218e5bcc06549 248 PANTHER PTHR24220 5 241 1.2E-155 T 23-04-2016 CLI_RS01805 2a1fb8ddda5e72053b4218e5bcc06549 248 PANTHER PTHR24220:SF494 5 241 1.2E-155 T 23-04-2016 CLI_RS02495 0fc15a3f9d8da509a29dbcdb774f02a8 205 PANTHER PTHR20857:SF15 1 202 2.6E-86 T 23-04-2016 CLI_RS02495 0fc15a3f9d8da509a29dbcdb774f02a8 205 PANTHER PTHR20857 1 202 2.6E-86 T 23-04-2016 CLI_RS02495 0fc15a3f9d8da509a29dbcdb774f02a8 205 Pfam PF02581 Thiamine monophosphate synthase/TENI 7 188 5.2E-67 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02495 0fc15a3f9d8da509a29dbcdb774f02a8 205 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 205 27.523 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02495 0fc15a3f9d8da509a29dbcdb774f02a8 205 SUPERFAMILY SSF51391 5 201 8.76E-65 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02495 0fc15a3f9d8da509a29dbcdb774f02a8 205 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 7 200 1.9E-69 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CLI_RS02495 0fc15a3f9d8da509a29dbcdb774f02a8 205 Gene3D G3DSA:3.20.20.70 3 202 1.1E-75 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS18675 f038bd1e2ced6be9115ffd1d1b064f85 409 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 404 1.7E-137 T 23-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CLI_RS18675 f038bd1e2ced6be9115ffd1d1b064f85 409 Gene3D G3DSA:2.40.30.10 189 280 1.1E-17 T 23-04-2016 CLI_RS18675 f038bd1e2ced6be9115ffd1d1b064f85 409 Pfam PF03486 HI0933-like protein 4 404 2.1E-128 T 23-04-2016 CLI_RS18675 f038bd1e2ced6be9115ffd1d1b064f85 409 Gene3D G3DSA:3.50.50.60 4 186 5.8E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS18675 f038bd1e2ced6be9115ffd1d1b064f85 409 Gene3D G3DSA:3.50.50.60 351 405 5.8E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS18675 f038bd1e2ced6be9115ffd1d1b064f85 409 SUPERFAMILY SSF160996 189 352 2.22E-43 T 23-04-2016 CLI_RS18675 f038bd1e2ced6be9115ffd1d1b064f85 409 PANTHER PTHR10617:SF103 342 406 3.3E-113 T 23-04-2016 CLI_RS18675 f038bd1e2ced6be9115ffd1d1b064f85 409 PANTHER PTHR10617:SF103 2 299 3.3E-113 T 23-04-2016 CLI_RS18675 f038bd1e2ced6be9115ffd1d1b064f85 409 PANTHER PTHR10617 2 299 3.3E-113 T 23-04-2016 CLI_RS18675 f038bd1e2ced6be9115ffd1d1b064f85 409 PANTHER PTHR10617 342 406 3.3E-113 T 23-04-2016 CLI_RS18675 f038bd1e2ced6be9115ffd1d1b064f85 409 SUPERFAMILY SSF51905 349 406 3.62E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS18675 f038bd1e2ced6be9115ffd1d1b064f85 409 SUPERFAMILY SSF51905 4 187 3.62E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS10855 2a3f45dda7d60207a1d5653e45db5608 159 Pfam PF09701 CRISPR-associated protein (Cas_Cmr5) 10 151 5.3E-26 T 23-04-2016 IPR010160 CRISPR-associated protein, Cmr5 CLI_RS10855 2a3f45dda7d60207a1d5653e45db5608 159 TIGRFAM TIGR01881 cas_Cmr5: CRISPR type III-B/RAMP module-associated protein Cmr5 40 155 2.1E-14 T 23-04-2016 IPR010160 CRISPR-associated protein, Cmr5 CLI_RS10855 2a3f45dda7d60207a1d5653e45db5608 159 Gene3D G3DSA:1.10.520.30 4 155 3.5E-41 T 23-04-2016 IPR023101 AF1862-like domain CLI_RS10855 2a3f45dda7d60207a1d5653e45db5608 159 SUPERFAMILY SSF158568 5 153 2.48E-29 T 23-04-2016 IPR023101 AF1862-like domain CLI_RS18135 5d974b11efd63157919c5d970abc63c2 181 Pfam PF00156 Phosphoribosyl transferase domain 17 162 5.4E-27 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS18135 5d974b11efd63157919c5d970abc63c2 181 PANTHER PTHR22573:SF56 6 181 6.0E-83 T 23-04-2016 CLI_RS18135 5d974b11efd63157919c5d970abc63c2 181 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 11 175 1.5E-68 T 23-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 CLI_RS18135 5d974b11efd63157919c5d970abc63c2 181 Gene3D G3DSA:3.40.50.2020 4 181 2.9E-83 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS18135 5d974b11efd63157919c5d970abc63c2 181 SUPERFAMILY SSF53271 4 181 1.88E-59 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS18135 5d974b11efd63157919c5d970abc63c2 181 PANTHER PTHR22573 6 181 6.0E-83 T 23-04-2016 CLI_RS00670 b23b497a48d48bcb606c83b5f2299ee3 424 Gene3D G3DSA:3.40.190.10 149 313 1.3E-19 T 23-04-2016 CLI_RS00670 b23b497a48d48bcb606c83b5f2299ee3 424 SUPERFAMILY SSF53850 36 422 1.63E-39 T 23-04-2016 CLI_RS00670 b23b497a48d48bcb606c83b5f2299ee3 424 Gene3D G3DSA:3.40.190.10 314 365 1.1E-12 T 23-04-2016 CLI_RS00670 b23b497a48d48bcb606c83b5f2299ee3 424 Gene3D G3DSA:3.40.190.10 35 147 1.1E-12 T 23-04-2016 CLI_RS00670 b23b497a48d48bcb606c83b5f2299ee3 424 Pfam PF13416 Bacterial extracellular solute-binding protein 54 347 4.2E-20 T 23-04-2016 CLI_RS00670 b23b497a48d48bcb606c83b5f2299ee3 424 PANTHER PTHR30061:SF24 1 424 2.2E-101 T 23-04-2016 CLI_RS00670 b23b497a48d48bcb606c83b5f2299ee3 424 PANTHER PTHR30061 1 424 2.2E-101 T 23-04-2016 CLI_RS07270 c1db7c1cd5e8003103106e9df27aff01 251 SUPERFAMILY SSF52540 3 227 9.32E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07270 c1db7c1cd5e8003103106e9df27aff01 251 Pfam PF00005 ABC transporter 22 170 8.0E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS07270 c1db7c1cd5e8003103106e9df27aff01 251 SMART SM00382 31 219 2.6E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS07270 c1db7c1cd5e8003103106e9df27aff01 251 Gene3D G3DSA:3.40.50.300 3 222 1.2E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07270 c1db7c1cd5e8003103106e9df27aff01 251 PANTHER PTHR24220 5 250 6.0E-133 T 23-04-2016 CLI_RS07270 c1db7c1cd5e8003103106e9df27aff01 251 PANTHER PTHR24220:SF580 5 250 6.0E-133 T 23-04-2016 CLI_RS07300 0e6892b53907d35ae77c3b60f98cb91c 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 218 9.1E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07300 0e6892b53907d35ae77c3b60f98cb91c 221 SUPERFAMILY SSF161098 13 203 1.7E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07300 0e6892b53907d35ae77c3b60f98cb91c 221 PANTHER PTHR30614:SF16 1 221 2.3E-135 T 23-04-2016 CLI_RS07300 0e6892b53907d35ae77c3b60f98cb91c 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 112 1.0E-22 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CLI_RS07300 0e6892b53907d35ae77c3b60f98cb91c 221 Gene3D G3DSA:1.10.3720.10 14 218 1.6E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07300 0e6892b53907d35ae77c3b60f98cb91c 221 PANTHER PTHR30614 1 221 2.3E-135 T 23-04-2016 CLI_RS11595 2992700da7e093fe93d309f91de44993 226 SMART SM00448 2 112 2.1E-44 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS11595 2992700da7e093fe93d309f91de44993 226 Gene3D G3DSA:3.40.50.2300 1 121 5.4E-41 T 23-04-2016 CLI_RS11595 2992700da7e093fe93d309f91de44993 226 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS11595 2992700da7e093fe93d309f91de44993 226 PANTHER PTHR26402 2 226 5.2E-100 T 23-04-2016 CLI_RS11595 2992700da7e093fe93d309f91de44993 226 SMART SM00862 148 223 4.6E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS11595 2992700da7e093fe93d309f91de44993 226 SUPERFAMILY SSF52172 1 181 1.08E-41 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS11595 2992700da7e093fe93d309f91de44993 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 222 3.2E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS11595 2992700da7e093fe93d309f91de44993 226 Gene3D G3DSA:1.10.10.10 125 224 1.3E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11595 2992700da7e093fe93d309f91de44993 226 PANTHER PTHR26402:SF578 2 226 5.2E-100 T 23-04-2016 CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 SUPERFAMILY SSF52821 24 147 4.58E-20 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 Gene3D G3DSA:3.40.250.10 18 148 5.0E-23 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 Gene3D G3DSA:3.40.250.10 302 441 1.2E-28 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 SUPERFAMILY SSF52821 300 442 1.83E-28 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 Pfam PF00581 Rhodanese-like domain 30 140 3.9E-12 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 Pfam PF00581 Rhodanese-like domain 310 431 6.0E-13 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 Pfam PF00581 Rhodanese-like domain 183 276 1.0E-16 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 Gene3D G3DSA:3.40.250.10 149 292 1.6E-33 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 SUPERFAMILY SSF52821 149 291 1.07E-25 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 PANTHER PTHR11364:SF15 137 441 5.4E-194 T 23-04-2016 CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 SMART SM00450 306 435 2.8E-13 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 SMART SM00450 156 280 1.7E-17 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 SMART SM00450 27 144 2.4E-11 T 23-04-2016 IPR001763 Rhodanese-like domain CLI_RS05960 733655efc45f1d4229117aa7dfdad69a 445 PANTHER PTHR11364 137 441 5.4E-194 T 23-04-2016 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 30 43 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 PANTHER PTHR30385:SF4 16 172 1.8E-24 T 23-04-2016 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 Pfam PF08281 Sigma-70, region 4 120 161 4.4E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 Gene3D G3DSA:1.10.10.10 119 171 2.4E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 Pfam PF04542 Sigma-70 region 2 19 75 1.5E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 SUPERFAMILY SSF88946 5 75 2.49E-20 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 PRINTS PR00046 Major sigma-70 factor signature 145 160 2.8E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 PRINTS PR00046 Major sigma-70 factor signature 54 62 2.8E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 PRINTS PR00046 Major sigma-70 factor signature 30 43 2.8E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 PRINTS PR00046 Major sigma-70 factor signature 128 140 2.8E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 PRINTS PR00046 Major sigma-70 factor signature 160 171 2.8E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 SUPERFAMILY SSF88659 114 177 2.43E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 Gene3D G3DSA:1.10.601.10 5 70 9.6E-18 T 23-04-2016 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 PANTHER PTHR30385 16 172 1.8E-24 T 23-04-2016 CLI_RS11915 679b68d8ecb7c0718d54583c871ec659 183 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 171 1.5E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS00445 2d5dc4e0976a5dad7fbe6ba1f2748d78 367 Gene3D G3DSA:3.90.1720.10 252 358 3.3E-46 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS00445 2d5dc4e0976a5dad7fbe6ba1f2748d78 367 SUPERFAMILY SSF57997 30 92 7.63E-7 T 23-04-2016 CLI_RS00445 2d5dc4e0976a5dad7fbe6ba1f2748d78 367 SUPERFAMILY SSF54001 253 359 1.5E-43 T 23-04-2016 CLI_RS00445 2d5dc4e0976a5dad7fbe6ba1f2748d78 367 PANTHER PTHR21666 239 361 8.3E-42 T 23-04-2016 CLI_RS00445 2d5dc4e0976a5dad7fbe6ba1f2748d78 367 Pfam PF00877 NlpC/P60 family 270 358 4.4E-29 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS00390 3514d7ed0df333ffcf24772894006788 386 SUPERFAMILY SSF53187 276 370 7.73E-44 T 23-04-2016 CLI_RS00390 3514d7ed0df333ffcf24772894006788 386 SUPERFAMILY SSF53187 3 177 7.73E-44 T 23-04-2016 CLI_RS00390 3514d7ed0df333ffcf24772894006788 386 PIRSF PIRSF037226 1 386 1.6E-95 T 23-04-2016 IPR017144 Peptidase M20A, amidohydrolase, predicted CLI_RS00390 3514d7ed0df333ffcf24772894006788 386 PANTHER PTHR30575 1 381 4.6E-131 T 23-04-2016 CLI_RS00390 3514d7ed0df333ffcf24772894006788 386 Gene3D G3DSA:3.40.630.10 273 381 9.7E-44 T 23-04-2016 CLI_RS00390 3514d7ed0df333ffcf24772894006788 386 Gene3D G3DSA:3.40.630.10 1 165 9.7E-44 T 23-04-2016 CLI_RS00390 3514d7ed0df333ffcf24772894006788 386 PANTHER PTHR30575:SF0 1 381 4.6E-131 T 23-04-2016 CLI_RS14400 40b46884758311534877f45c90f0a1f1 204 PANTHER PTHR19136 2 197 1.7E-57 T 23-04-2016 CLI_RS14400 40b46884758311534877f45c90f0a1f1 204 PANTHER PTHR19136:SF78 2 197 1.7E-57 T 23-04-2016 CLI_RS14400 40b46884758311534877f45c90f0a1f1 204 TIGRFAM TIGR03310 matur_MocA_YgfJ: molybdenum cofactor cytidylyltransferase 3 186 2.3E-68 T 23-04-2016 IPR017696 Molybdenum cofactor cytidylyltransferase MetaCyc: PWY-6476 CLI_RS14400 40b46884758311534877f45c90f0a1f1 204 SUPERFAMILY SSF53448 1 185 3.68E-28 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS14400 40b46884758311534877f45c90f0a1f1 204 Gene3D G3DSA:3.90.550.10 1 187 9.0E-28 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS14400 40b46884758311534877f45c90f0a1f1 204 Pfam PF12804 MobA-like NTP transferase domain 4 160 5.7E-33 T 23-04-2016 IPR025877 MobA-like NTP transferase CLI_RS15820 43b95e655ee5985d16d10f23d48c599a 65 TIGRFAM TIGR04065 ocin_CLI_3235: putative bacteriocin precursor, CLI_3235 family 1 35 5.9E-13 T 23-04-2016 IPR023968 Bacteriocin precursor, CLI3235 family, putative CLI_RS12600 506d81af1d9a96d040deb38cba948a1b 493 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 2 493 4.3E-230 T 23-04-2016 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 CLI_RS12600 506d81af1d9a96d040deb38cba948a1b 493 PIRSF PIRSF007466 1 493 1.1E-238 T 23-04-2016 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 CLI_RS12600 506d81af1d9a96d040deb38cba948a1b 493 Gene3D G3DSA:3.40.50.300 20 102 4.4E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12600 506d81af1d9a96d040deb38cba948a1b 493 Gene3D G3DSA:3.40.50.300 136 238 4.4E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12600 506d81af1d9a96d040deb38cba948a1b 493 SUPERFAMILY SSF52540 18 252 2.43E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12600 506d81af1d9a96d040deb38cba948a1b 493 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 1 493 8.4E-260 T 23-04-2016 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 CLI_RS03305 d7498b65e872a30bbfc25b8aa9af5f57 386 PANTHER PTHR30474 2 386 7.9E-169 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CLI_RS03305 d7498b65e872a30bbfc25b8aa9af5f57 386 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 23 374 2.2E-118 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CLI_RS03305 d7498b65e872a30bbfc25b8aa9af5f57 386 PANTHER PTHR30474:SF1 2 386 7.9E-169 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CLI_RS03305 d7498b65e872a30bbfc25b8aa9af5f57 386 Pfam PF01098 Cell cycle protein 26 371 7.7E-102 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CLI_RS03305 d7498b65e872a30bbfc25b8aa9af5f57 386 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 332 356 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CLI_RS11265 3c27779cf5408c93c22c69b2c3fbd62d 130 TIGRFAM TIGR03987 TIGR03987: TIGR03987 family protein 5 129 2.0E-54 T 23-04-2016 IPR023813 Conserved hypothetical protein CHP03987 CLI_RS12320 73d33eb092bb063523e13a7287a3a7de 298 PANTHER PTHR30269:SF15 34 289 2.7E-116 T 23-04-2016 CLI_RS12320 73d33eb092bb063523e13a7287a3a7de 298 PANTHER PTHR30269 34 289 2.7E-116 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS12320 73d33eb092bb063523e13a7287a3a7de 298 Pfam PF01925 Sulfite exporter TauE/SafE 4 147 5.3E-12 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS12320 73d33eb092bb063523e13a7287a3a7de 298 Pfam PF01925 Sulfite exporter TauE/SafE 173 284 2.3E-8 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS06035 4ee97e86b3c27a5f9df89f569804543f 335 Pfam PF04392 ABC transporter substrate binding protein 40 330 2.1E-87 T 23-04-2016 IPR007487 ABC transporter, substrate-binding protein CLI_RS06035 4ee97e86b3c27a5f9df89f569804543f 335 SUPERFAMILY SSF53822 47 294 3.53E-13 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CLI_RS06035 4ee97e86b3c27a5f9df89f569804543f 335 Gene3D G3DSA:3.40.50.2300 167 298 6.4E-47 T 23-04-2016 CLI_RS06035 4ee97e86b3c27a5f9df89f569804543f 335 PANTHER PTHR35271 7 332 2.6E-76 T 23-04-2016 CLI_RS06035 4ee97e86b3c27a5f9df89f569804543f 335 Gene3D G3DSA:3.40.50.2300 36 166 7.3E-57 T 23-04-2016 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 Gene3D G3DSA:3.40.50.10490 68 200 9.1E-28 T 23-04-2016 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 203 216 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 199 217 8.7E-25 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 395 409 8.7E-25 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 409 422 8.7E-25 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 377 395 8.7E-25 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 274 295 8.7E-25 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 77 96 8.7E-25 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 PANTHER PTHR11469 57 443 3.7E-160 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 Pfam PF00342 Phosphoglucose isomerase 77 427 1.6E-22 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 2 436 24.648 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 SUPERFAMILY SSF53697 7 448 2.5E-133 T 23-04-2016 CLI_RS16780 755df90143cbe7fefec5f2fc4f643385 450 Gene3D G3DSA:3.40.50.10490 201 418 9.5E-92 T 23-04-2016 CLI_RS02360 e4beb6572a31e1635375f9d1ad474b75 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 118 2.1E-50 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CLI_RS02360 e4beb6572a31e1635375f9d1ad474b75 127 PANTHER PTHR21012 2 117 2.1E-65 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CLI_RS02360 e4beb6572a31e1635375f9d1ad474b75 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 70.761 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CLI_RS02360 e4beb6572a31e1635375f9d1ad474b75 127 PIRSF PIRSF006246 1 127 4.6E-55 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CLI_RS02360 e4beb6572a31e1635375f9d1ad474b75 127 Gene3D G3DSA:2.40.40.20 1 123 5.6E-58 T 23-04-2016 CLI_RS02360 e4beb6572a31e1635375f9d1ad474b75 127 Pfam PF02261 Aspartate decarboxylase 1 114 4.9E-55 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CLI_RS02360 e4beb6572a31e1635375f9d1ad474b75 127 PANTHER PTHR21012:SF0 2 117 2.1E-65 T 23-04-2016 CLI_RS02360 e4beb6572a31e1635375f9d1ad474b75 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 93 2.0E-36 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CLI_RS02360 e4beb6572a31e1635375f9d1ad474b75 127 SUPERFAMILY SSF50692 1 122 1.04E-50 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain CLI_RS06795 8711452385e2514d84eef514c27849d9 221 PANTHER PTHR24220 5 221 1.6E-92 T 23-04-2016 CLI_RS06795 8711452385e2514d84eef514c27849d9 221 Pfam PF00005 ABC transporter 23 169 7.2E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS06795 8711452385e2514d84eef514c27849d9 221 SUPERFAMILY SSF52540 3 220 5.57E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06795 8711452385e2514d84eef514c27849d9 221 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS06795 8711452385e2514d84eef514c27849d9 221 SMART SM00382 32 218 1.4E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06795 8711452385e2514d84eef514c27849d9 221 Gene3D G3DSA:3.40.50.300 2 221 2.6E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06795 8711452385e2514d84eef514c27849d9 221 PANTHER PTHR24220:SF86 5 221 1.6E-92 T 23-04-2016 CLI_RS08700 632145e970bc01862a34ac1e2f7ed963 171 SUPERFAMILY SSF47240 1 159 1.44E-59 T 23-04-2016 IPR009078 Ferritin-like superfamily CLI_RS08700 632145e970bc01862a34ac1e2f7ed963 171 Pfam PF00210 Ferritin-like domain 8 143 6.9E-42 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CLI_RS08700 632145e970bc01862a34ac1e2f7ed963 171 PANTHER PTHR11431 3 158 4.9E-48 T 23-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 CLI_RS08700 632145e970bc01862a34ac1e2f7ed963 171 Gene3D G3DSA:1.20.1260.10 1 165 1.1E-60 T 23-04-2016 IPR012347 Ferritin-related CLI_RS08700 632145e970bc01862a34ac1e2f7ed963 171 PANTHER PTHR11431:SF4 3 158 4.9E-48 T 23-04-2016 CLI_RS01940 39bb04195db2de7dd3ab9216dbc21666 196 Pfam PF12672 Protein of unknown function (DUF3793) 27 191 4.3E-40 T 23-04-2016 IPR024523 Protein of unknown function DUF3793 CLI_RS02760 22c9c04f5b4454c12d9bcf93c0da1c19 194 Gene3D G3DSA:1.10.3210.10 20 177 5.7E-21 T 23-04-2016 IPR006674 HD domain CLI_RS02760 22c9c04f5b4454c12d9bcf93c0da1c19 194 Pfam PF01966 HD domain 26 144 4.6E-17 T 23-04-2016 IPR006674 HD domain CLI_RS02760 22c9c04f5b4454c12d9bcf93c0da1c19 194 SUPERFAMILY SSF109604 22 182 1.96E-34 T 23-04-2016 CLI_RS02760 22c9c04f5b4454c12d9bcf93c0da1c19 194 SMART SM00471 20 154 1.7E-9 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS02760 22c9c04f5b4454c12d9bcf93c0da1c19 194 TIGRFAM TIGR00277 HDIG: HDIG domain 24 114 6.2E-9 T 23-04-2016 IPR006675 HDIG domain CLI_RS09495 6ff885a1cec90b9ace77b3d4cc5aca83 567 PIRSF PIRSF003128 1 559 9.1E-164 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CLI_RS09495 6ff885a1cec90b9ace77b3d4cc5aca83 567 PANTHER PTHR11059 2 563 1.6E-164 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CLI_RS09495 6ff885a1cec90b9ace77b3d4cc5aca83 567 Gene3D G3DSA:3.40.50.300 433 522 5.7E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09495 6ff885a1cec90b9ace77b3d4cc5aca83 567 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 509 2.9E-16 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal CLI_RS09495 6ff885a1cec90b9ace77b3d4cc5aca83 567 SUPERFAMILY SSF52540 1 201 9.52E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09495 6ff885a1cec90b9ace77b3d4cc5aca83 567 SUPERFAMILY SSF52540 354 514 9.52E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09495 6ff885a1cec90b9ace77b3d4cc5aca83 567 SUPERFAMILY SSF52540 290 325 9.52E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09495 6ff885a1cec90b9ace77b3d4cc5aca83 567 Gene3D G3DSA:3.40.50.300 1 208 1.9E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09495 6ff885a1cec90b9ace77b3d4cc5aca83 567 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 554 1.3E-157 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CLI_RS07400 ef24856bee3f6c26a70e97cc1d4a6030 501 PIRSF PIRSF038958 3 499 3.3E-69 T 23-04-2016 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type CLI_RS07400 ef24856bee3f6c26a70e97cc1d4a6030 501 Pfam PF01943 Polysaccharide biosynthesis protein 10 308 5.9E-15 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLI_RS07400 ef24856bee3f6c26a70e97cc1d4a6030 501 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 8 493 3.3E-187 T 23-04-2016 IPR014249 Sporulation stage V protein B CLI_RS07400 ef24856bee3f6c26a70e97cc1d4a6030 501 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 359 494 3.7E-11 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLI_RS12885 085b20f56779b73e85aec1f49c0f3488 329 PANTHER PTHR13812 1 329 1.8E-111 T 23-04-2016 CLI_RS12885 085b20f56779b73e85aec1f49c0f3488 329 PIRSF PIRSF001439 1 329 6.9E-84 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin CLI_RS12885 085b20f56779b73e85aec1f49c0f3488 329 PANTHER PTHR13812:SF19 1 329 1.8E-111 T 23-04-2016 CLI_RS12885 085b20f56779b73e85aec1f49c0f3488 329 SUPERFAMILY SSF51735 1 328 6.02E-93 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS12885 085b20f56779b73e85aec1f49c0f3488 329 Gene3D G3DSA:3.40.50.720 138 302 6.1E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS12885 085b20f56779b73e85aec1f49c0f3488 329 Gene3D G3DSA:3.30.1780.10 1 137 6.2E-47 T 23-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal CLI_RS12885 085b20f56779b73e85aec1f49c0f3488 329 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 2 321 6.6E-80 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin CLI_RS04860 92f28441a4b61b9a0ef65699b1c4a621 215 Pfam PF13241 Putative NAD(P)-binding 8 109 3.9E-14 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CLI_RS04860 92f28441a4b61b9a0ef65699b1c4a621 215 PANTHER PTHR35330 3 212 3.1E-48 T 23-04-2016 CLI_RS04860 92f28441a4b61b9a0ef65699b1c4a621 215 Gene3D G3DSA:3.40.50.720 8 111 1.1E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS04860 92f28441a4b61b9a0ef65699b1c4a621 215 SUPERFAMILY SSF51735 7 103 3.54E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS14445 7c08358cf549dc6b7ba4601664959749 181 Pfam PF02698 DUF218 domain 28 150 6.1E-31 T 23-04-2016 IPR003848 Domain of unknown function DUF218 CLI_RS14445 7c08358cf549dc6b7ba4601664959749 181 PANTHER PTHR30336:SF4 1 169 1.8E-50 T 23-04-2016 CLI_RS14445 7c08358cf549dc6b7ba4601664959749 181 Gene3D G3DSA:3.40.50.620 21 152 1.0E-29 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS14445 7c08358cf549dc6b7ba4601664959749 181 PANTHER PTHR30336 1 169 1.8E-50 T 23-04-2016 CLI_RS03825 11652d7f1e99c3d92bfdeb99c4ed9901 247 Pfam PF01061 ABC-2 type transporter 3 212 7.3E-27 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 CLI_RS03825 11652d7f1e99c3d92bfdeb99c4ed9901 247 PRINTS PR00164 ABC-2 type transport system membrane protein signature 22 43 1.1E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CLI_RS03825 11652d7f1e99c3d92bfdeb99c4ed9901 247 PRINTS PR00164 ABC-2 type transport system membrane protein signature 192 211 1.1E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CLI_RS03825 11652d7f1e99c3d92bfdeb99c4ed9901 247 PRINTS PR00164 ABC-2 type transport system membrane protein signature 172 191 1.1E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CLI_RS03825 11652d7f1e99c3d92bfdeb99c4ed9901 247 PRINTS PR00164 ABC-2 type transport system membrane protein signature 135 159 1.1E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CLI_RS03825 11652d7f1e99c3d92bfdeb99c4ed9901 247 PANTHER PTHR30294 1 247 2.6E-53 T 23-04-2016 CLI_RS03825 11652d7f1e99c3d92bfdeb99c4ed9901 247 PANTHER PTHR30294:SF14 1 247 2.6E-53 T 23-04-2016 CLI_RS03825 11652d7f1e99c3d92bfdeb99c4ed9901 247 PIRSF PIRSF006648 4 247 5.1E-18 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CLI_RS15410 21507687b3d68600622dacf1132a1cb6 217 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 5 216 3.1E-89 T 23-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CLI_RS15410 21507687b3d68600622dacf1132a1cb6 217 Pfam PF02397 Bacterial sugar transferase 24 211 2.7E-59 T 23-04-2016 IPR003362 Bacterial sugar transferase CLI_RS15410 21507687b3d68600622dacf1132a1cb6 217 PANTHER PTHR30576 1 217 5.5E-102 T 23-04-2016 CLI_RS12265 8a96e5a46a834e2ec0f2d6158c73e2ec 60 Pfam PF01783 Ribosomal L32p protein family 3 57 3.2E-25 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CLI_RS12265 8a96e5a46a834e2ec0f2d6158c73e2ec 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 3 56 6.7E-27 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CLI_RS12265 8a96e5a46a834e2ec0f2d6158c73e2ec 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 3 56 18.49 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CLI_RS12265 8a96e5a46a834e2ec0f2d6158c73e2ec 60 SUPERFAMILY SSF57829 2 56 2.2E-19 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 CLI_RS12265 8a96e5a46a834e2ec0f2d6158c73e2ec 60 PANTHER PTHR21026 2 56 2.7E-21 T 23-04-2016 CLI_RS06535 98dc62c60ee0fd5f6a91a97782a3bdf8 106 Pfam PF00085 Thioredoxin 3 104 1.9E-23 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 CLI_RS06535 98dc62c60ee0fd5f6a91a97782a3bdf8 106 Gene3D G3DSA:3.40.30.10 2 104 1.9E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS06535 98dc62c60ee0fd5f6a91a97782a3bdf8 106 PIRSF PIRSF000077 1 105 1.6E-23 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLI_RS06535 98dc62c60ee0fd5f6a91a97782a3bdf8 106 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CLI_RS06535 98dc62c60ee0fd5f6a91a97782a3bdf8 106 SUPERFAMILY SSF52833 4 104 6.56E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS06535 98dc62c60ee0fd5f6a91a97782a3bdf8 106 PANTHER PTHR10438 1 104 3.7E-24 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLI_RS09800 bd97a9f87261b8b6eb605649daf21cd5 605 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 6 204 2.5E-79 T 23-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLI_RS09800 bd97a9f87261b8b6eb605649daf21cd5 605 PANTHER PTHR30038 1 605 0.0 T 23-04-2016 CLI_RS09800 bd97a9f87261b8b6eb605649daf21cd5 605 Gene3D G3DSA:1.10.599.10 384 602 2.4E-79 T 23-04-2016 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 CLI_RS09800 bd97a9f87261b8b6eb605649daf21cd5 605 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 225 600 2.7E-142 T 23-04-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLI_RS09800 bd97a9f87261b8b6eb605649daf21cd5 605 Gene3D G3DSA:3.60.9.10 1 210 2.7E-89 T 23-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLI_RS09800 bd97a9f87261b8b6eb605649daf21cd5 605 SUPERFAMILY SSF48310 211 603 5.1E-139 T 23-04-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLI_RS09800 bd97a9f87261b8b6eb605649daf21cd5 605 SUPERFAMILY SSF56228 1 210 3.27E-75 T 23-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLI_RS09800 bd97a9f87261b8b6eb605649daf21cd5 605 SMART SM00790 4 206 1.1E-118 T 23-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLI_RS09800 bd97a9f87261b8b6eb605649daf21cd5 605 PANTHER PTHR30038:SF0 1 605 0.0 T 23-04-2016 CLI_RS15455 507d195b0a30bb20e2f25dcc2dee874c 367 Pfam PF13692 Glycosyl transferases group 1 207 309 1.5E-6 T 23-04-2016 CLI_RS15455 507d195b0a30bb20e2f25dcc2dee874c 367 SUPERFAMILY SSF53756 93 359 1.82E-16 T 23-04-2016 CLI_RS01410 7670fb8838da7c81887bd49d08ca6e55 335 SUPERFAMILY SSF55874 174 321 9.3E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01410 7670fb8838da7c81887bd49d08ca6e55 335 PANTHER PTHR24423:SF557 1 13 2.7E-48 T 23-04-2016 CLI_RS01410 7670fb8838da7c81887bd49d08ca6e55 335 PANTHER PTHR24423:SF557 92 321 2.7E-48 T 23-04-2016 CLI_RS01410 7670fb8838da7c81887bd49d08ca6e55 335 PANTHER PTHR24423 1 13 2.7E-48 T 23-04-2016 CLI_RS01410 7670fb8838da7c81887bd49d08ca6e55 335 PANTHER PTHR24423 92 321 2.7E-48 T 23-04-2016 CLI_RS01410 7670fb8838da7c81887bd49d08ca6e55 335 Gene3D G3DSA:3.30.565.10 146 321 8.1E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01410 7670fb8838da7c81887bd49d08ca6e55 335 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 215 320 3.1E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01410 7670fb8838da7c81887bd49d08ca6e55 335 SMART SM00387 214 325 4.5E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01865 c47acd9dba3884790f78d2d85eef8af1 44 TIGRFAM TIGR04223 quorum_AgrD: cyclic lactone autoinducer peptide 6 42 2.0E-13 T 23-04-2016 IPR009229 Staphylococcal AgrD CLI_RS15385 20e4e0198dc9d4d28776ba6f4cf0d388 140 SUPERFAMILY SSF55874 31 135 1.05E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS15385 20e4e0198dc9d4d28776ba6f4cf0d388 140 PANTHER PTHR35526 1 140 4.7E-96 T 23-04-2016 CLI_RS15385 20e4e0198dc9d4d28776ba6f4cf0d388 140 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 3 137 6.1E-69 T 23-04-2016 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0030435|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 CLI_RS15385 20e4e0198dc9d4d28776ba6f4cf0d388 140 Gene3D G3DSA:3.30.565.10 34 136 2.7E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS15385 20e4e0198dc9d4d28776ba6f4cf0d388 140 Pfam PF13581 Histidine kinase-like ATPase domain 14 137 6.3E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS15385 20e4e0198dc9d4d28776ba6f4cf0d388 140 PANTHER PTHR35526:SF2 1 140 4.7E-96 T 23-04-2016 CLI_RS08230 3d403a1e96848d7a24e83e179d86a560 315 SUPERFAMILY SSF53067 5 312 1.48E-69 T 23-04-2016 CLI_RS08230 3d403a1e96848d7a24e83e179d86a560 315 Gene3D G3DSA:3.30.420.40 141 296 2.2E-54 T 23-04-2016 CLI_RS08230 3d403a1e96848d7a24e83e179d86a560 315 PANTHER PTHR18964 1 312 8.7E-109 T 23-04-2016 CLI_RS08230 3d403a1e96848d7a24e83e179d86a560 315 Pfam PF00480 ROK family 7 311 2.8E-78 T 23-04-2016 IPR000600 ROK family CLI_RS08230 3d403a1e96848d7a24e83e179d86a560 315 PANTHER PTHR18964:SF123 1 312 8.7E-109 T 23-04-2016 CLI_RS08230 3d403a1e96848d7a24e83e179d86a560 315 Gene3D G3DSA:3.30.420.40 2 140 8.3E-46 T 23-04-2016 CLI_RS17990 48ebb35ec69cf3d2e388c4ca5d8b9c54 353 Gene3D G3DSA:1.10.150.20 293 342 3.8E-9 T 23-04-2016 CLI_RS17990 48ebb35ec69cf3d2e388c4ca5d8b9c54 353 SUPERFAMILY SSF47781 257 343 4.13E-13 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CLI_RS17990 48ebb35ec69cf3d2e388c4ca5d8b9c54 353 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 3 351 44.862 T 23-04-2016 IPR023763 DNA integrity scanning protein, DisA CLI_RS17990 48ebb35ec69cf3d2e388c4ca5d8b9c54 353 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 24 136 6.6E-26 T 23-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal CLI_RS17990 48ebb35ec69cf3d2e388c4ca5d8b9c54 353 Pfam PF10635 DisA bacterial checkpoint controller linker region 141 275 3.4E-53 T 23-04-2016 IPR018906 DNA integrity scanning, DisA, linker region CLI_RS17990 48ebb35ec69cf3d2e388c4ca5d8b9c54 353 SUPERFAMILY SSF143597 15 141 1.44E-30 T 23-04-2016 CLI_RS17990 48ebb35ec69cf3d2e388c4ca5d8b9c54 353 Gene3D G3DSA:3.40.1700.10 18 140 2.3E-30 T 23-04-2016 CLI_RS01935 20192be636a87da900bc74dd0fd5d459 95 PIRSF PIRSF020408 1 95 6.1E-33 T 23-04-2016 IPR016772 Uncharacterised conserved protein UCP020408 CLI_RS01935 20192be636a87da900bc74dd0fd5d459 95 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 2 90 1.8E-17 T 23-04-2016 IPR016772 Uncharacterised conserved protein UCP020408 CLI_RS01795 05cb3aaecc3cbdae3ef32ff0a7a15c71 326 PANTHER PTHR24423 117 324 1.3E-68 T 23-04-2016 CLI_RS01795 05cb3aaecc3cbdae3ef32ff0a7a15c71 326 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 221 325 3.6E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01795 05cb3aaecc3cbdae3ef32ff0a7a15c71 326 PRINTS PR00344 Bacterial sensor protein C-terminal signature 272 282 6.7E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01795 05cb3aaecc3cbdae3ef32ff0a7a15c71 326 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 306 6.7E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01795 05cb3aaecc3cbdae3ef32ff0a7a15c71 326 PRINTS PR00344 Bacterial sensor protein C-terminal signature 254 268 6.7E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01795 05cb3aaecc3cbdae3ef32ff0a7a15c71 326 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 325 6.7E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS01795 05cb3aaecc3cbdae3ef32ff0a7a15c71 326 PANTHER PTHR24423:SF539 117 324 1.3E-68 T 23-04-2016 CLI_RS01795 05cb3aaecc3cbdae3ef32ff0a7a15c71 326 SMART SM00387 216 326 1.3E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01795 05cb3aaecc3cbdae3ef32ff0a7a15c71 326 SUPERFAMILY SSF55874 164 325 5.5E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01795 05cb3aaecc3cbdae3ef32ff0a7a15c71 326 Gene3D G3DSA:3.30.565.10 178 323 2.0E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS17325 c4d83c21975d5f9cb9be9253800be955 294 Gene3D G3DSA:3.40.50.300 1 157 6.9E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17325 c4d83c21975d5f9cb9be9253800be955 294 PIRSF PIRSF005052 1 288 1.1E-110 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 CLI_RS17325 c4d83c21975d5f9cb9be9253800be955 294 PANTHER PTHR30448 1 293 5.5E-158 T 23-04-2016 CLI_RS17325 c4d83c21975d5f9cb9be9253800be955 294 Pfam PF03668 P-loop ATPase protein family 1 284 6.7E-104 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 CLI_RS17325 c4d83c21975d5f9cb9be9253800be955 294 PANTHER PTHR30448:SF0 1 293 5.5E-158 T 23-04-2016 CLI_RS17325 c4d83c21975d5f9cb9be9253800be955 294 SUPERFAMILY SSF52540 1 152 4.92E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17325 c4d83c21975d5f9cb9be9253800be955 294 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 285 41.898 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 CLI_RS01275 f0f2bd5b2116083fe708fd546a6bff2a 308 PANTHER PTHR32196:SF40 10 308 1.1E-138 T 23-04-2016 CLI_RS01275 f0f2bd5b2116083fe708fd546a6bff2a 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 286 1.7E-40 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLI_RS01275 f0f2bd5b2116083fe708fd546a6bff2a 308 PANTHER PTHR32196 10 308 1.1E-138 T 23-04-2016 CLI_RS18815 33424d805f092c69d7a7189139d36a88 239 Pfam PF02527 rRNA small subunit methyltransferase G 23 201 2.0E-55 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CLI_RS18815 33424d805f092c69d7a7189139d36a88 239 SUPERFAMILY SSF53335 5 239 1.28E-49 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS18815 33424d805f092c69d7a7189139d36a88 239 PIRSF PIRSF003078 1 221 2.6E-58 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CLI_RS18815 33424d805f092c69d7a7189139d36a88 239 PANTHER PTHR31760 1 238 1.3E-87 T 23-04-2016 CLI_RS18815 33424d805f092c69d7a7189139d36a88 239 Gene3D G3DSA:3.40.50.150 5 238 1.4E-74 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS18815 33424d805f092c69d7a7189139d36a88 239 PANTHER PTHR31760:SF0 1 238 1.3E-87 T 23-04-2016 CLI_RS18815 33424d805f092c69d7a7189139d36a88 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 218 1.7E-56 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CLI_RS18815 33424d805f092c69d7a7189139d36a88 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 215 28.419 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CLI_RS13170 3eb4c06e5eb99b3e2cfdaaa4e22f4522 108 Gene3D G3DSA:1.20.5.620 36 84 0.001 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLI_RS13170 3eb4c06e5eb99b3e2cfdaaa4e22f4522 108 SUPERFAMILY SSF81573 17 73 4.32E-5 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLI_RS13100 0c0f4312cbc9e93e6e0ae7947465ec2a 58 SUPERFAMILY SSF140500 6 54 3.4E-12 T 23-04-2016 CLI_RS13100 0c0f4312cbc9e93e6e0ae7947465ec2a 58 Pfam PF09388 Spo0E like sporulation regulatory protein 9 50 7.9E-13 T 23-04-2016 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 CLI_RS10955 779d57bc123e683ca3c36b2bb3b705c2 257 SUPERFAMILY SSF53067 2 252 7.6E-42 T 23-04-2016 CLI_RS10955 779d57bc123e683ca3c36b2bb3b705c2 257 PANTHER PTHR32329 1 254 7.9E-136 T 23-04-2016 CLI_RS10955 779d57bc123e683ca3c36b2bb3b705c2 257 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 2 250 1.8E-84 T 23-04-2016 IPR008275 CoA enzyme activase CLI_RS10955 779d57bc123e683ca3c36b2bb3b705c2 257 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 252 5.7E-64 T 23-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS10955 779d57bc123e683ca3c36b2bb3b705c2 257 Gene3D G3DSA:3.30.420.40 95 234 3.0E-52 T 23-04-2016 CLI_RS11660 2985ff02f8c2c03423ecc96838a7ac94 133 SUPERFAMILY SSF53041 1 100 9.68E-20 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS11660 2985ff02f8c2c03423ecc96838a7ac94 133 Pfam PF00239 Resolvase, N terminal domain 3 99 7.0E-15 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS11660 2985ff02f8c2c03423ecc96838a7ac94 133 SMART SM00857 2 130 1.8E-8 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS11660 2985ff02f8c2c03423ecc96838a7ac94 133 Gene3D G3DSA:3.40.50.1390 1 125 2.4E-20 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 11 484 2.9E-171 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PANTHER PTHR11014 394 486 7.0E-158 T 23-04-2016 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PANTHER PTHR11014 1 186 7.0E-158 T 23-04-2016 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PANTHER PTHR11014 205 311 7.0E-158 T 23-04-2016 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 Pfam PF07687 Peptidase dimerisation domain 213 290 4.0E-5 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PANTHER PTHR11014:SF54 394 486 7.0E-158 T 23-04-2016 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PANTHER PTHR11014:SF54 1 186 7.0E-158 T 23-04-2016 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PANTHER PTHR11014:SF54 205 311 7.0E-158 T 23-04-2016 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PRINTS PR00934 X-His dipeptidase (M25) signature 452 474 3.2E-47 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PRINTS PR00934 X-His dipeptidase (M25) signature 160 178 3.2E-47 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PRINTS PR00934 X-His dipeptidase (M25) signature 81 100 3.2E-47 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PRINTS PR00934 X-His dipeptidase (M25) signature 430 446 3.2E-47 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PRINTS PR00934 X-His dipeptidase (M25) signature 252 271 3.2E-47 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PRINTS PR00934 X-His dipeptidase (M25) signature 136 153 3.2E-47 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PRINTS PR00934 X-His dipeptidase (M25) signature 102 120 3.2E-47 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PRINTS PR00934 X-His dipeptidase (M25) signature 207 224 3.2E-47 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 Gene3D G3DSA:3.40.630.10 399 485 5.4E-91 T 23-04-2016 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 Gene3D G3DSA:3.40.630.10 4 182 5.4E-91 T 23-04-2016 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 SUPERFAMILY SSF53187 399 484 8.38E-53 T 23-04-2016 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 SUPERFAMILY SSF53187 12 183 8.38E-53 T 23-04-2016 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 PIRSF PIRSF016599 2 487 2.4E-172 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CLI_RS07225 38ce132cf0b51d1d5ce19d46f45ce207 487 Pfam PF01546 Peptidase family M20/M25/M40 73 482 5.2E-16 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLI_RS00420 3a23dae9505d53391fb93951e31b9ac4 304 Pfam PF04468 PSP1 C-terminal conserved region 61 146 6.7E-34 T 23-04-2016 IPR007557 PSP1, C-terminal CLI_RS00420 3a23dae9505d53391fb93951e31b9ac4 304 PANTHER PTHR21600:SF3 5 259 2.7E-82 T 23-04-2016 CLI_RS00420 3a23dae9505d53391fb93951e31b9ac4 304 PANTHER PTHR21600 5 259 2.7E-82 T 23-04-2016 CLI_RS12965 e53f8c2c4611a0ce1a84bb06719514e0 397 SUPERFAMILY SSF55681 196 373 6.64E-20 T 23-04-2016 CLI_RS12965 e53f8c2c4611a0ce1a84bb06719514e0 397 SUPERFAMILY SSF55681 94 168 6.64E-20 T 23-04-2016 CLI_RS12965 e53f8c2c4611a0ce1a84bb06719514e0 397 Gene3D G3DSA:3.30.930.10 138 371 7.7E-13 T 23-04-2016 CLI_RS12965 e53f8c2c4611a0ce1a84bb06719514e0 397 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 199 370 8.6E-9 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS10625 08db237272057da6438856cb1aa5caa8 433 Pfam PF01554 MatE 16 174 3.0E-18 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS10625 08db237272057da6438856cb1aa5caa8 433 Pfam PF01554 MatE 236 395 6.2E-18 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS10625 08db237272057da6438856cb1aa5caa8 433 PANTHER PTHR11206:SF138 2 433 3.2E-236 T 23-04-2016 CLI_RS10625 08db237272057da6438856cb1aa5caa8 433 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 407 3.1E-44 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS10625 08db237272057da6438856cb1aa5caa8 433 PIRSF PIRSF006603 1 432 4.0E-60 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS10625 08db237272057da6438856cb1aa5caa8 433 PANTHER PTHR11206 2 433 3.2E-236 T 23-04-2016 CLI_RS10445 0deaab2d1a64cea48d6fa7faa27393d3 927 Pfam PF10593 Z1 domain 420 656 9.5E-76 T 23-04-2016 IPR018310 Putative endonuclease, Z1 domain CLI_RS17090 255e3b2119d9808ffb30f695001e1b10 363 SUPERFAMILY SSF52540 11 76 6.09E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17090 255e3b2119d9808ffb30f695001e1b10 363 Gene3D G3DSA:3.40.50.300 25 87 1.4E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17090 255e3b2119d9808ffb30f695001e1b10 363 Gene3D G3DSA:3.40.50.300 212 259 2.3E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17090 255e3b2119d9808ffb30f695001e1b10 363 SUPERFAMILY SSF52540 210 259 1.38E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04460 c412bf7bfee3108be63a5a04169921b1 264 PANTHER PTHR30294:SF26 78 219 1.5E-42 T 23-04-2016 CLI_RS04460 c412bf7bfee3108be63a5a04169921b1 264 PANTHER PTHR30294:SF26 1 54 1.5E-42 T 23-04-2016 CLI_RS04460 c412bf7bfee3108be63a5a04169921b1 264 PANTHER PTHR30294 78 219 1.5E-42 T 23-04-2016 CLI_RS04460 c412bf7bfee3108be63a5a04169921b1 264 PANTHER PTHR30294 1 54 1.5E-42 T 23-04-2016 CLI_RS04460 c412bf7bfee3108be63a5a04169921b1 264 Pfam PF12679 ABC-2 family transporter protein 7 221 1.2E-10 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 PANTHER PTHR30435 1 107 2.4E-106 T 23-04-2016 CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 PANTHER PTHR30435 214 345 2.4E-106 T 23-04-2016 CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 PANTHER PTHR30435 133 162 2.4E-106 T 23-04-2016 CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 Pfam PF00460 Flagella basal body rod protein 5 35 5.1E-12 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 PANTHER PTHR30435:SF1 1 107 2.4E-106 T 23-04-2016 CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 PANTHER PTHR30435:SF1 214 345 2.4E-106 T 23-04-2016 CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 PANTHER PTHR30435:SF1 133 162 2.4E-106 T 23-04-2016 CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 258 343 3.8E-22 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 107 1.2E-31 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 212 325 1.8E-27 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 SUPERFAMILY SSF117143 136 305 9.29E-33 T 23-04-2016 CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 SUPERFAMILY SSF117143 91 109 9.29E-33 T 23-04-2016 CLI_RS13295 329cf91e3b5bd6641f531cf08bd1ff09 345 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 Gene3D G3DSA:3.40.50.150 180 228 2.7E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 Gene3D G3DSA:3.40.50.150 274 314 2.7E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 Gene3D G3DSA:3.40.50.150 364 508 2.7E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 375 381 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 SUPERFAMILY SSF53335 266 316 1.96E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 SUPERFAMILY SSF53335 91 232 1.96E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 SUPERFAMILY SSF53335 367 514 1.96E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 Pfam PF07669 Eco57I restriction-modification methylase 371 483 5.8E-9 T 23-04-2016 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 PANTHER PTHR33841:SF1 11 741 5.2E-120 T 23-04-2016 CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 Gene3D G3DSA:3.90.220.10 555 683 5.6E-5 T 23-04-2016 IPR023135 N6 adenine-specific DNA methyltransferase, TaqI class, C-terminal CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 Pfam PF12950 TaqI-like C-terminal specificity domain 564 681 1.0E-26 T 23-04-2016 IPR025931 TaqI-like C-terminal specificity domain CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 SUPERFAMILY SSF116734 539 723 4.41E-5 T 23-04-2016 CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 372 384 8.8E-17 T 23-04-2016 CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 178 194 8.8E-17 T 23-04-2016 CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 412 436 8.8E-17 T 23-04-2016 CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 208 222 8.8E-17 T 23-04-2016 CLI_RS06565 2d526959b4a41e8bb3be2996e852f866 741 PANTHER PTHR33841 11 741 5.2E-120 T 23-04-2016 CLI_RS15520 42c0d0273152d3185469a1325e74e151 358 Gene3D G3DSA:1.25.40.10 225 343 7.7E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS15520 42c0d0273152d3185469a1325e74e151 358 SMART SM00028 244 277 1.2E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS15520 42c0d0273152d3185469a1325e74e151 358 SMART SM00028 312 344 130.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS15520 42c0d0273152d3185469a1325e74e151 358 SMART SM00028 278 311 1.8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS15520 42c0d0273152d3185469a1325e74e151 358 Pfam PF13181 Tetratricopeptide repeat 282 309 0.074 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS15520 42c0d0273152d3185469a1325e74e151 358 PANTHER PTHR23083 83 344 1.8E-13 T 23-04-2016 CLI_RS15520 42c0d0273152d3185469a1325e74e151 358 Pfam PF00515 Tetratricopeptide repeat 246 274 6.6E-7 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CLI_RS15520 42c0d0273152d3185469a1325e74e151 358 SUPERFAMILY SSF48452 223 344 3.87E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS13420 5b41f0a7e43e987c6ecb85434c55fb01 553 Gene3D G3DSA:3.90.550.10 5 226 3.9E-59 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS13420 5b41f0a7e43e987c6ecb85434c55fb01 553 SUPERFAMILY SSF53756 370 544 2.2E-13 T 23-04-2016 CLI_RS13420 5b41f0a7e43e987c6ecb85434c55fb01 553 Gene3D G3DSA:3.40.50.2000 358 524 5.5E-13 T 23-04-2016 CLI_RS13420 5b41f0a7e43e987c6ecb85434c55fb01 553 PANTHER PTHR21485:SF20 1 316 1.2E-152 T 23-04-2016 CLI_RS13420 5b41f0a7e43e987c6ecb85434c55fb01 553 PANTHER PTHR21485 1 316 1.2E-152 T 23-04-2016 CLI_RS13420 5b41f0a7e43e987c6ecb85434c55fb01 553 Pfam PF02348 Cytidylyltransferase 8 134 3.9E-23 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CLI_RS13420 5b41f0a7e43e987c6ecb85434c55fb01 553 SUPERFAMILY SSF53448 6 227 1.91E-45 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS13420 5b41f0a7e43e987c6ecb85434c55fb01 553 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 380 536 1.8E-10 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS09970 cc7e6907d29e715352f3383d3102df8e 271 PANTHER PTHR37954:SF1 8 271 1.2E-144 T 23-04-2016 CLI_RS09970 cc7e6907d29e715352f3383d3102df8e 271 PANTHER PTHR37954 8 271 1.2E-144 T 23-04-2016 CLI_RS09970 cc7e6907d29e715352f3383d3102df8e 271 Pfam PF02596 Uncharacterised ArCR, COG2043 29 238 1.2E-51 T 23-04-2016 IPR003748 Protein of unknown function DUF169 CLI_RS08080 87977b4149a08e8cccc2287ff7a76600 253 SUPERFAMILY SSF51366 3 252 2.12E-81 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLI_RS08080 87977b4149a08e8cccc2287ff7a76600 253 Gene3D G3DSA:3.20.20.70 4 253 1.2E-107 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS08080 87977b4149a08e8cccc2287ff7a76600 253 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 252 1.7E-117 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 CLI_RS08080 87977b4149a08e8cccc2287ff7a76600 253 Pfam PF00977 Histidine biosynthesis protein 5 235 5.6E-90 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 CLI_RS08080 87977b4149a08e8cccc2287ff7a76600 253 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 49.935 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 CLI_RS08080 87977b4149a08e8cccc2287ff7a76600 253 PANTHER PTHR21235 2 253 1.3E-133 T 23-04-2016 CLI_RS08080 87977b4149a08e8cccc2287ff7a76600 253 PANTHER PTHR21235:SF2 2 253 1.3E-133 T 23-04-2016 CLI_RS08890 5d7202b893a84527bcf9e350db64f07e 477 SUPERFAMILY SSF116726 393 473 6.15E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS08890 5d7202b893a84527bcf9e350db64f07e 477 PANTHER PTHR32468 1 404 4.0E-137 T 23-04-2016 CLI_RS08890 5d7202b893a84527bcf9e350db64f07e 477 PANTHER PTHR32468:SF9 1 404 4.0E-137 T 23-04-2016 CLI_RS08890 5d7202b893a84527bcf9e350db64f07e 477 Pfam PF02080 TrkA-C domain 407 473 1.5E-13 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS08890 5d7202b893a84527bcf9e350db64f07e 477 Gene3D G3DSA:3.30.70.1450 406 473 2.0E-7 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLI_RS08890 5d7202b893a84527bcf9e350db64f07e 477 Pfam PF00999 Sodium/hydrogen exchanger family 10 385 1.7E-57 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CLI_RS15850 807a4f947136fb30d4c49cea5c9df0d0 93 PANTHER PTHR10245 2 68 2.2E-17 T 23-04-2016 CLI_RS15850 807a4f947136fb30d4c49cea5c9df0d0 93 Gene3D G3DSA:1.10.260.40 2 63 2.3E-25 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS15850 807a4f947136fb30d4c49cea5c9df0d0 93 Pfam PF01381 Helix-turn-helix 6 60 1.9E-16 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS15850 807a4f947136fb30d4c49cea5c9df0d0 93 SUPERFAMILY SSF47413 2 66 5.35E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS15850 807a4f947136fb30d4c49cea5c9df0d0 93 SMART SM00530 5 60 6.1E-17 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS12590 05fa78dc2fe6a607439b6346d9882d30 333 SUPERFAMILY SSF53774 1 328 9.81E-100 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CLI_RS12590 05fa78dc2fe6a607439b6346d9882d30 333 SMART SM00870 3 320 8.9E-138 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CLI_RS12590 05fa78dc2fe6a607439b6346d9882d30 333 PRINTS PR00139 Asparaginase/glutaminase family signature 81 99 2.3E-14 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CLI_RS12590 05fa78dc2fe6a607439b6346d9882d30 333 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 2.3E-14 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CLI_RS12590 05fa78dc2fe6a607439b6346d9882d30 333 PRINTS PR00139 Asparaginase/glutaminase family signature 254 272 2.3E-14 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CLI_RS12590 05fa78dc2fe6a607439b6346d9882d30 333 Gene3D G3DSA:3.40.50.1170 1 208 1.9E-59 T 23-04-2016 IPR027474 L-asparaginase, N-terminal CLI_RS12590 05fa78dc2fe6a607439b6346d9882d30 333 PANTHER PTHR11707 4 327 5.5E-72 T 23-04-2016 CLI_RS12590 05fa78dc2fe6a607439b6346d9882d30 333 PIRSF PIRSF001220 1 327 4.5E-93 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CLI_RS12590 05fa78dc2fe6a607439b6346d9882d30 333 Gene3D G3DSA:3.40.50.40 209 325 5.7E-36 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain CLI_RS12590 05fa78dc2fe6a607439b6346d9882d30 333 Pfam PF00710 Asparaginase, N-terminal 3 192 5.0E-53 T 23-04-2016 IPR027474 L-asparaginase, N-terminal CLI_RS12590 05fa78dc2fe6a607439b6346d9882d30 333 PIRSF PIRSF500176 1 328 8.4E-86 T 23-04-2016 CLI_RS04595 b17b2639973f870530bfc368bd7b2ab4 253 PANTHER PTHR31082:SF6 3 253 4.8E-76 T 23-04-2016 CLI_RS04595 b17b2639973f870530bfc368bd7b2ab4 253 Pfam PF06738 Putative threonine/serine exporter 11 248 6.0E-61 T 23-04-2016 IPR010619 Putative threonine/serine exporter CLI_RS04595 b17b2639973f870530bfc368bd7b2ab4 253 PANTHER PTHR31082 3 253 4.8E-76 T 23-04-2016 CLI_RS01065 9d07d144030446f0270ca4bf68ab0594 93 SMART SM00418 13 92 1.2E-18 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS01065 9d07d144030446f0270ca4bf68ab0594 93 PANTHER PTHR33154:SF9 1 90 1.6E-30 T 23-04-2016 CLI_RS01065 9d07d144030446f0270ca4bf68ab0594 93 Pfam PF12840 Helix-turn-helix domain 12 70 1.8E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01065 9d07d144030446f0270ca4bf68ab0594 93 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 4.2E-9 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS01065 9d07d144030446f0270ca4bf68ab0594 93 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 4.2E-9 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS01065 9d07d144030446f0270ca4bf68ab0594 93 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 4.2E-9 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLI_RS01065 9d07d144030446f0270ca4bf68ab0594 93 SUPERFAMILY SSF46785 3 91 2.11E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01065 9d07d144030446f0270ca4bf68ab0594 93 Gene3D G3DSA:1.10.10.10 6 90 2.0E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01065 9d07d144030446f0270ca4bf68ab0594 93 PANTHER PTHR33154 1 90 1.6E-30 T 23-04-2016 CLI_RS02085 e40123dcda961fe53fcb1150299fac47 130 Pfam PF07009 NusG domain II 12 121 5.0E-33 T 23-04-2016 IPR024045 NusG, domain 2 CLI_RS02085 e40123dcda961fe53fcb1150299fac47 130 Gene3D G3DSA:2.60.320.10 36 120 8.5E-22 T 23-04-2016 IPR024045 NusG, domain 2 CLI_RS02085 e40123dcda961fe53fcb1150299fac47 130 PANTHER PTHR40451 1 130 1.3E-36 T 23-04-2016 CLI_RS02085 e40123dcda961fe53fcb1150299fac47 130 PANTHER PTHR40451:SF1 1 130 1.3E-36 T 23-04-2016 CLI_RS06900 6b37f376d79316be2d398ca5857e6968 195 Pfam PF02915 Rubrerythrin 11 143 2.9E-28 T 23-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLI_RS06900 6b37f376d79316be2d398ca5857e6968 195 Gene3D G3DSA:2.20.28.10 151 195 8.8E-20 T 23-04-2016 IPR004039 Rubredoxin-type fold CLI_RS06900 6b37f376d79316be2d398ca5857e6968 195 SUPERFAMILY SSF57802 152 194 2.9E-11 T 23-04-2016 CLI_RS06900 6b37f376d79316be2d398ca5857e6968 195 PANTHER PTHR33746 1 193 1.1E-111 T 23-04-2016 CLI_RS06900 6b37f376d79316be2d398ca5857e6968 195 PANTHER PTHR33746:SF1 1 193 1.1E-111 T 23-04-2016 CLI_RS06900 6b37f376d79316be2d398ca5857e6968 195 Gene3D G3DSA:1.20.1260.10 1 149 3.2E-55 T 23-04-2016 IPR012347 Ferritin-related CLI_RS06900 6b37f376d79316be2d398ca5857e6968 195 SUPERFAMILY SSF47240 5 151 3.16E-40 T 23-04-2016 IPR009078 Ferritin-like superfamily CLI_RS14645 e587d854a5a2762e243cabf7331a679d 206 Pfam PF14242 Domain of unknown function (DUF4342) 45 124 9.0E-28 T 23-04-2016 IPR025642 Domain of unknown function DUF4342 CLI_RS14645 e587d854a5a2762e243cabf7331a679d 206 SUPERFAMILY SSF46934 1 44 1.33E-10 T 23-04-2016 IPR009060 UBA-like GO:0005515 CLI_RS14645 e587d854a5a2762e243cabf7331a679d 206 Gene3D G3DSA:1.10.8.10 1 43 1.3E-10 T 23-04-2016 CLI_RS17480 3217a7b19a49208626ae2d5da1c436f9 155 SUPERFAMILY SSF47240 10 152 2.11E-28 T 23-04-2016 IPR009078 Ferritin-like superfamily CLI_RS17480 3217a7b19a49208626ae2d5da1c436f9 155 Pfam PF07875 Coat F domain 93 155 6.4E-24 T 23-04-2016 IPR012851 Spore coat protein CotF-like CLI_RS17480 3217a7b19a49208626ae2d5da1c436f9 155 Gene3D G3DSA:1.20.1260.10 11 147 7.0E-12 T 23-04-2016 IPR012347 Ferritin-related CLI_RS03670 dddb21a0231dfcaa2d38fd65b246d575 446 Pfam PF02347 Glycine cleavage system P-protein 4 442 4.4E-140 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 CLI_RS03670 dddb21a0231dfcaa2d38fd65b246d575 446 Gene3D G3DSA:3.40.640.10 91 329 2.6E-21 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS03670 dddb21a0231dfcaa2d38fd65b246d575 446 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 2 446 48.007 T 23-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 CLI_RS03670 dddb21a0231dfcaa2d38fd65b246d575 446 SUPERFAMILY SSF53383 3 446 1.19E-110 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS03670 dddb21a0231dfcaa2d38fd65b246d575 446 PANTHER PTHR11773:SF2 3 444 1.3E-245 T 23-04-2016 CLI_RS03670 dddb21a0231dfcaa2d38fd65b246d575 446 PIRSF PIRSF006815 2 446 1.6E-192 T 23-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 CLI_RS03670 dddb21a0231dfcaa2d38fd65b246d575 446 PANTHER PTHR11773 3 444 1.3E-245 T 23-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 CLI_RS15630 998a0d701676fda7cc58740a95b7fa28 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 19.936 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLI_RS15630 998a0d701676fda7cc58740a95b7fa28 65 PANTHER PTHR33343 1 65 9.4E-28 T 23-04-2016 CLI_RS15630 998a0d701676fda7cc58740a95b7fa28 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.1E-20 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLI_RS15630 998a0d701676fda7cc58740a95b7fa28 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.1E-20 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLI_RS15630 998a0d701676fda7cc58740a95b7fa28 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.1E-20 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLI_RS15630 998a0d701676fda7cc58740a95b7fa28 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS15630 998a0d701676fda7cc58740a95b7fa28 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 9.4E-28 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLI_RS15630 998a0d701676fda7cc58740a95b7fa28 65 Pfam PF01632 Ribosomal protein L35 2 62 3.1E-26 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS15630 998a0d701676fda7cc58740a95b7fa28 65 SUPERFAMILY SSF143034 2 64 1.07E-24 T 23-04-2016 CLI_RS18430 8457f803786c02867bb69425e7a49378 156 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 6 98 2.7E-9 T 23-04-2016 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 CLI_RS00365 eb7d9eed81c3fafcf75e9aa1ecf7c70f 247 PANTHER PTHR11085 3 246 4.1E-83 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 CLI_RS00365 eb7d9eed81c3fafcf75e9aa1ecf7c70f 247 SUPERFAMILY SSF52467 3 246 2.25E-83 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS00365 eb7d9eed81c3fafcf75e9aa1ecf7c70f 247 Pfam PF02146 Sir2 family 21 201 2.1E-51 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 CLI_RS00365 eb7d9eed81c3fafcf75e9aa1ecf7c70f 247 Gene3D G3DSA:3.40.50.1220 85 122 8.5E-46 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS00365 eb7d9eed81c3fafcf75e9aa1ecf7c70f 247 Gene3D G3DSA:3.40.50.1220 177 246 8.5E-46 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS00365 eb7d9eed81c3fafcf75e9aa1ecf7c70f 247 Gene3D G3DSA:3.40.50.1220 3 31 8.5E-46 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS00365 eb7d9eed81c3fafcf75e9aa1ecf7c70f 247 Gene3D G3DSA:3.30.1600.10 32 74 3.2E-28 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain CLI_RS00365 eb7d9eed81c3fafcf75e9aa1ecf7c70f 247 Gene3D G3DSA:3.30.1600.10 123 170 3.2E-28 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain CLI_RS00365 eb7d9eed81c3fafcf75e9aa1ecf7c70f 247 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 5 244 62.128 T 23-04-2016 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 CLI_RS11205 b8c10b455a4da35500b3a46408a80cea 149 PANTHER PTHR23091 7 144 2.3E-45 T 23-04-2016 CLI_RS11205 b8c10b455a4da35500b3a46408a80cea 149 Pfam PF13673 Acetyltransferase (GNAT) domain 27 146 2.1E-20 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS11205 b8c10b455a4da35500b3a46408a80cea 149 SUPERFAMILY SSF55729 2 147 1.33E-37 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS11205 b8c10b455a4da35500b3a46408a80cea 149 PANTHER PTHR23091:SF275 7 144 2.3E-45 T 23-04-2016 CLI_RS11205 b8c10b455a4da35500b3a46408a80cea 149 Gene3D G3DSA:3.40.630.30 1 145 4.0E-47 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04145 7832b483ea0ef92643c5ee43663e38b6 306 PANTHER PTHR24220 7 224 1.1E-103 T 23-04-2016 CLI_RS04145 7832b483ea0ef92643c5ee43663e38b6 306 PANTHER PTHR24220:SF523 7 224 1.1E-103 T 23-04-2016 CLI_RS04145 7832b483ea0ef92643c5ee43663e38b6 306 Gene3D G3DSA:3.40.50.300 3 227 4.8E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04145 7832b483ea0ef92643c5ee43663e38b6 306 SMART SM00382 30 214 1.7E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS04145 7832b483ea0ef92643c5ee43663e38b6 306 SUPERFAMILY SSF52540 4 224 8.15E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04145 7832b483ea0ef92643c5ee43663e38b6 306 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS04145 7832b483ea0ef92643c5ee43663e38b6 306 Pfam PF00005 ABC transporter 22 162 1.0E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS09965 78284c18e523d405ad0a86d0ee1915f8 221 PANTHER PTHR26402 3 220 8.1E-159 T 23-04-2016 CLI_RS09965 78284c18e523d405ad0a86d0ee1915f8 221 Gene3D G3DSA:1.10.10.10 127 220 1.1E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09965 78284c18e523d405ad0a86d0ee1915f8 221 PANTHER PTHR26402:SF591 3 220 8.1E-159 T 23-04-2016 CLI_RS09965 78284c18e523d405ad0a86d0ee1915f8 221 SMART SM00862 148 219 1.3E-28 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS09965 78284c18e523d405ad0a86d0ee1915f8 221 SMART SM00448 3 113 1.4E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS09965 78284c18e523d405ad0a86d0ee1915f8 221 SUPERFAMILY SSF52172 3 176 1.1E-40 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS09965 78284c18e523d405ad0a86d0ee1915f8 221 Pfam PF00072 Response regulator receiver domain 5 114 1.7E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS09965 78284c18e523d405ad0a86d0ee1915f8 221 Gene3D G3DSA:3.40.50.2300 2 126 1.9E-40 T 23-04-2016 CLI_RS09965 78284c18e523d405ad0a86d0ee1915f8 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 219 2.6E-27 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS02685 f532ffbf5964ff30d3be9146bf6da9c9 310 SMART SM00382 28 211 6.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS02685 f532ffbf5964ff30d3be9146bf6da9c9 310 Pfam PF00005 ABC transporter 19 162 9.2E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS02685 f532ffbf5964ff30d3be9146bf6da9c9 310 PANTHER PTHR24220 5 307 2.7E-119 T 23-04-2016 CLI_RS02685 f532ffbf5964ff30d3be9146bf6da9c9 310 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS02685 f532ffbf5964ff30d3be9146bf6da9c9 310 PANTHER PTHR24220:SF305 5 307 2.7E-119 T 23-04-2016 CLI_RS02685 f532ffbf5964ff30d3be9146bf6da9c9 310 SUPERFAMILY SSF52540 3 227 9.02E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02685 f532ffbf5964ff30d3be9146bf6da9c9 310 Gene3D G3DSA:3.40.50.300 3 232 4.0E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00555 0e0ba8c6f2b209c82e85d86ccc7cc5fe 353 Gene3D G3DSA:2.40.50.100 154 191 2.6E-9 T 23-04-2016 CLI_RS00555 0e0ba8c6f2b209c82e85d86ccc7cc5fe 353 Gene3D G3DSA:2.40.50.100 67 89 2.6E-9 T 23-04-2016 CLI_RS00555 0e0ba8c6f2b209c82e85d86ccc7cc5fe 353 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 352 3.6E-34 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CLI_RS00555 0e0ba8c6f2b209c82e85d86ccc7cc5fe 353 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 238 3.2E-14 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLI_RS00555 0e0ba8c6f2b209c82e85d86ccc7cc5fe 353 PANTHER PTHR32347 1 352 6.0E-68 T 23-04-2016 CLI_RS00555 0e0ba8c6f2b209c82e85d86ccc7cc5fe 353 PANTHER PTHR32347:SF14 1 352 6.0E-68 T 23-04-2016 CLI_RS00555 0e0ba8c6f2b209c82e85d86ccc7cc5fe 353 SUPERFAMILY SSF111369 68 233 4.58E-9 T 23-04-2016 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 Gene3D G3DSA:3.50.50.60 3 188 4.8E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 Gene3D G3DSA:3.50.50.60 349 404 4.8E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 PANTHER PTHR10617 2 301 2.0E-117 T 23-04-2016 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 PANTHER PTHR10617 340 406 2.0E-117 T 23-04-2016 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 PANTHER PTHR10617:SF103 2 301 2.0E-117 T 23-04-2016 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 PANTHER PTHR10617:SF103 340 406 2.0E-117 T 23-04-2016 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 SUPERFAMILY SSF51905 347 404 1.59E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 SUPERFAMILY SSF51905 3 190 1.59E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 SUPERFAMILY SSF160996 191 350 3.14E-47 T 23-04-2016 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 Gene3D G3DSA:1.10.8.260 277 331 2.5E-4 T 23-04-2016 IPR023166 HI0933 insert-like domain CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 4 401 3.2E-139 T 23-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 Pfam PF03486 HI0933-like protein 3 402 5.2E-135 T 23-04-2016 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.2E-5 T 23-04-2016 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 372 379 2.2E-5 T 23-04-2016 CLI_RS08825 4e4bbc51bd331e75078a4be0e4e790b8 407 Gene3D G3DSA:2.40.30.10 190 276 4.0E-25 T 23-04-2016 CLI_RS01290 889d1a7bfd8a22a6fd2125337622460d 343 Pfam PF04198 Putative sugar-binding domain 90 338 3.3E-67 T 23-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 CLI_RS01290 889d1a7bfd8a22a6fd2125337622460d 343 SUPERFAMILY SSF46785 19 84 1.5E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01290 889d1a7bfd8a22a6fd2125337622460d 343 PANTHER PTHR34294 87 343 1.2E-157 T 23-04-2016 CLI_RS01290 889d1a7bfd8a22a6fd2125337622460d 343 PANTHER PTHR34294 2 67 1.2E-157 T 23-04-2016 CLI_RS01290 889d1a7bfd8a22a6fd2125337622460d 343 PANTHER PTHR34294:SF5 87 343 1.2E-157 T 23-04-2016 CLI_RS01290 889d1a7bfd8a22a6fd2125337622460d 343 PANTHER PTHR34294:SF5 2 67 1.2E-157 T 23-04-2016 CLI_RS01290 889d1a7bfd8a22a6fd2125337622460d 343 SUPERFAMILY SSF100950 89 337 2.09E-68 T 23-04-2016 CLI_RS01290 889d1a7bfd8a22a6fd2125337622460d 343 Gene3D G3DSA:1.10.10.10 1 95 1.0E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01290 889d1a7bfd8a22a6fd2125337622460d 343 Gene3D G3DSA:3.40.50.1360 96 339 1.5E-85 T 23-04-2016 CLI_RS04680 ba0783ee55a3e4a0eeafac5f5419a079 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 55 1.7E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS04680 ba0783ee55a3e4a0eeafac5f5419a079 187 Gene3D G3DSA:1.10.10.60 3 39 1.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04680 ba0783ee55a3e4a0eeafac5f5419a079 187 SUPERFAMILY SSF46689 6 68 5.13E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS04680 ba0783ee55a3e4a0eeafac5f5419a079 187 Gene3D G3DSA:1.10.357.10 40 155 6.7E-9 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS17595 8ec6dc962d146d8c17d01eb51e6e164d 177 PANTHER PTHR21666:SF199 1 176 2.5E-91 T 23-04-2016 CLI_RS17595 8ec6dc962d146d8c17d01eb51e6e164d 177 PANTHER PTHR21666 1 176 2.5E-91 T 23-04-2016 CLI_RS17595 8ec6dc962d146d8c17d01eb51e6e164d 177 Pfam PF07486 Cell Wall Hydrolase 74 174 1.0E-26 T 23-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 CLI_RS17910 81ef374443b716a89b3161894ef6487c 75 Gene3D G3DSA:1.20.5.1030 16 73 3.8E-16 T 23-04-2016 CLI_RS17910 81ef374443b716a89b3161894ef6487c 75 Hamap MF_00422 Protein translocase subunit SecE [secE]. 16 71 12.316 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE CLI_RS17910 81ef374443b716a89b3161894ef6487c 75 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 20 74 4.1E-17 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CLI_RS17910 81ef374443b716a89b3161894ef6487c 75 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 20 72 4.2E-13 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 CLI_RS11445 17cdf5826c7b1e4a5feee48607df22d0 234 SUPERFAMILY SSF52172 2 130 1.85E-39 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS11445 17cdf5826c7b1e4a5feee48607df22d0 234 PANTHER PTHR26402 4 233 4.1E-96 T 23-04-2016 CLI_RS11445 17cdf5826c7b1e4a5feee48607df22d0 234 Pfam PF00072 Response regulator receiver domain 6 115 2.3E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS11445 17cdf5826c7b1e4a5feee48607df22d0 234 SMART SM00448 4 114 4.7E-41 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS11445 17cdf5826c7b1e4a5feee48607df22d0 234 SUPERFAMILY SSF46894 132 231 3.97E-31 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS11445 17cdf5826c7b1e4a5feee48607df22d0 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 3.3E-28 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS11445 17cdf5826c7b1e4a5feee48607df22d0 234 Gene3D G3DSA:1.10.10.10 132 231 1.4E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11445 17cdf5826c7b1e4a5feee48607df22d0 234 PANTHER PTHR26402:SF603 4 233 4.1E-96 T 23-04-2016 CLI_RS11445 17cdf5826c7b1e4a5feee48607df22d0 234 Gene3D G3DSA:3.40.50.2300 2 127 9.9E-39 T 23-04-2016 CLI_RS11445 17cdf5826c7b1e4a5feee48607df22d0 234 SMART SM00862 154 230 1.7E-27 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS16745 62625697c884152919f48105ee03573e 738 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 271 9.1E-81 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CLI_RS16745 62625697c884152919f48105ee03573e 738 PANTHER PTHR11070:SF7 2 736 8.9E-218 T 23-04-2016 CLI_RS16745 62625697c884152919f48105ee03573e 738 PANTHER PTHR11070 2 736 8.9E-218 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CLI_RS16745 62625697c884152919f48105ee03573e 738 Gene3D G3DSA:1.10.10.160 111 189 2.5E-20 T 23-04-2016 IPR013986 DExx box DNA helicase domain CLI_RS16745 62625697c884152919f48105ee03573e 738 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 4 736 1.1E-287 T 23-04-2016 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 CLI_RS16745 62625697c884152919f48105ee03573e 738 Gene3D G3DSA:1.10.486.10 388 538 5.7E-49 T 23-04-2016 CLI_RS16745 62625697c884152919f48105ee03573e 738 Gene3D G3DSA:3.40.50.300 285 387 2.5E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16745 62625697c884152919f48105ee03573e 738 Gene3D G3DSA:3.40.50.300 549 637 2.5E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16745 62625697c884152919f48105ee03573e 738 Gene3D G3DSA:3.40.50.300 190 284 1.6E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16745 62625697c884152919f48105ee03573e 738 Gene3D G3DSA:3.40.50.300 3 107 1.6E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16745 62625697c884152919f48105ee03573e 738 Pfam PF13361 UvrD-like helicase C-terminal domain 276 612 3.2E-73 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CLI_RS16745 62625697c884152919f48105ee03573e 738 SUPERFAMILY SSF52540 4 639 2.9E-178 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12855 71f74f775b63a9ee0ac24456fbbbdbf3 148 Gene3D G3DSA:1.10.10.10 1 136 8.6E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12855 71f74f775b63a9ee0ac24456fbbbdbf3 148 PANTHER PTHR33221 2 146 8.0E-67 T 23-04-2016 CLI_RS12855 71f74f775b63a9ee0ac24456fbbbdbf3 148 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.5E-41 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CLI_RS12855 71f74f775b63a9ee0ac24456fbbbdbf3 148 PANTHER PTHR33221:SF1 2 146 8.0E-67 T 23-04-2016 CLI_RS12855 71f74f775b63a9ee0ac24456fbbbdbf3 148 Pfam PF02082 Transcriptional regulator 1 82 5.2E-29 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CLI_RS12855 71f74f775b63a9ee0ac24456fbbbdbf3 148 SUPERFAMILY SSF46785 2 135 3.68E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04720 7bcfb7693fff0a205e0f38a178c7f509 410 PANTHER PTHR31377:SF0 4 206 2.1E-102 T 23-04-2016 CLI_RS04720 7bcfb7693fff0a205e0f38a178c7f509 410 PANTHER PTHR31377:SF0 227 407 2.1E-102 T 23-04-2016 CLI_RS04720 7bcfb7693fff0a205e0f38a178c7f509 410 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 7 407 4.9E-62 T 23-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CLI_RS04720 7bcfb7693fff0a205e0f38a178c7f509 410 PANTHER PTHR31377 4 206 2.1E-102 T 23-04-2016 CLI_RS04720 7bcfb7693fff0a205e0f38a178c7f509 410 PANTHER PTHR31377 227 407 2.1E-102 T 23-04-2016 CLI_RS04720 7bcfb7693fff0a205e0f38a178c7f509 410 SUPERFAMILY SSF55909 4 407 5.3E-69 T 23-04-2016 CLI_RS04720 7bcfb7693fff0a205e0f38a178c7f509 410 Gene3D G3DSA:3.75.10.10 4 408 2.8E-84 T 23-04-2016 CLI_RS00475 cf7fd83f45cabc329af90c2d7f99bfff 289 SUPERFAMILY SSF88713 84 267 1.93E-49 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLI_RS00475 cf7fd83f45cabc329af90c2d7f99bfff 289 PANTHER PTHR34216 61 283 4.8E-64 T 23-04-2016 CLI_RS00475 cf7fd83f45cabc329af90c2d7f99bfff 289 Gene3D G3DSA:3.20.20.370 95 255 1.6E-41 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS00475 cf7fd83f45cabc329af90c2d7f99bfff 289 Pfam PF01522 Polysaccharide deacetylase 121 245 2.7E-34 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS14510 a594f82fb88b5704b4f79732d69dc406 93 Pfam PF04456 Protein of unknown function (DUF503) 3 89 2.3E-33 T 23-04-2016 IPR007546 Protein of unknown function DUF503 CLI_RS14510 a594f82fb88b5704b4f79732d69dc406 93 SUPERFAMILY SSF103007 1 93 5.49E-33 T 23-04-2016 IPR007546 Protein of unknown function DUF503 CLI_RS14510 a594f82fb88b5704b4f79732d69dc406 93 Gene3D G3DSA:3.30.70.1120 1 93 1.5E-35 T 23-04-2016 IPR007546 Protein of unknown function DUF503 CLI_RS14510 a594f82fb88b5704b4f79732d69dc406 93 PANTHER PTHR36441 2 93 1.4E-32 T 23-04-2016 CLI_RS12345 ea2717aef39a8e5d8a952080dd06b96b 481 Pfam PF13520 Amino acid permease 5 440 2.4E-56 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS12345 ea2717aef39a8e5d8a952080dd06b96b 481 PIRSF PIRSF006060 1 480 3.5E-53 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS12345 ea2717aef39a8e5d8a952080dd06b96b 481 PANTHER PTHR11785 1 481 5.0E-112 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS12345 ea2717aef39a8e5d8a952080dd06b96b 481 PANTHER PTHR11785:SF322 1 481 5.0E-112 T 23-04-2016 CLI_RS05115 0639bf4c1bd759303eb739fb59c88689 355 PANTHER PTHR30472 1 353 2.9E-236 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS05115 0639bf4c1bd759303eb739fb59c88689 355 PANTHER PTHR30472:SF18 1 353 2.9E-236 T 23-04-2016 CLI_RS05115 0639bf4c1bd759303eb739fb59c88689 355 Gene3D G3DSA:1.10.3470.10 15 349 5.0E-105 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS05115 0639bf4c1bd759303eb739fb59c88689 355 SUPERFAMILY SSF81345 7 347 1.44E-82 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS05115 0639bf4c1bd759303eb739fb59c88689 355 Pfam PF01032 FecCD transport family 25 347 1.2E-97 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS07625 2180a2b263d621b879631e1852ddb940 253 PANTHER PTHR22748 1 253 7.2E-128 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CLI_RS07625 2180a2b263d621b879631e1852ddb940 253 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 252 8.5E-97 T 23-04-2016 CLI_RS07625 2180a2b263d621b879631e1852ddb940 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 245 9.5E-34 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CLI_RS07625 2180a2b263d621b879631e1852ddb940 253 SUPERFAMILY SSF56219 1 253 4.06E-84 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CLI_RS07625 2180a2b263d621b879631e1852ddb940 253 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 9.2E-101 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CLI_RS07625 2180a2b263d621b879631e1852ddb940 253 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 23-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CLI_RS07625 2180a2b263d621b879631e1852ddb940 253 Gene3D G3DSA:3.60.10.10 1 253 2.5E-103 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CLI_RS06350 c8c01148c80774153dd60b653c0e7a21 282 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 51 7.6E-7 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLI_RS06350 c8c01148c80774153dd60b653c0e7a21 282 Gene3D G3DSA:1.10.3720.10 71 277 2.0E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06350 c8c01148c80774153dd60b653c0e7a21 282 PANTHER PTHR30465 4 282 4.3E-121 T 23-04-2016 CLI_RS06350 c8c01148c80774153dd60b653c0e7a21 282 PANTHER PTHR30465:SF2 4 282 4.3E-121 T 23-04-2016 CLI_RS06350 c8c01148c80774153dd60b653c0e7a21 282 SUPERFAMILY SSF161098 77 263 1.7E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06350 c8c01148c80774153dd60b653c0e7a21 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 281 1.4E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS09295 99e82b87ae4d7b9b88b628f0e3bc1bd2 410 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 399 7.0E-67 T 23-04-2016 IPR006444 Phage major capsid protein, HK97 CLI_RS09295 99e82b87ae4d7b9b88b628f0e3bc1bd2 410 Pfam PF05065 Phage capsid family 122 396 4.2E-32 T 23-04-2016 IPR024455 Phage capsid CLI_RS09295 99e82b87ae4d7b9b88b628f0e3bc1bd2 410 SUPERFAMILY SSF56563 115 397 2.09E-37 T 23-04-2016 CLI_RS02890 488c2f62793bd25d2555e5a2dcc7d2be 178 Pfam PF02417 Chromate transporter 5 169 2.4E-49 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 CLI_RS02890 488c2f62793bd25d2555e5a2dcc7d2be 178 PANTHER PTHR33567:SF2 3 178 3.6E-94 T 23-04-2016 CLI_RS02890 488c2f62793bd25d2555e5a2dcc7d2be 178 PANTHER PTHR33567 3 178 3.6E-94 T 23-04-2016 CLI_RS13450 bc10e863fb785e187be2a16b3d726cdd 236 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 19 223 1.8E-71 T 23-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 CLI_RS13450 bc10e863fb785e187be2a16b3d726cdd 236 Gene3D G3DSA:3.40.50.300 39 220 6.4E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13450 bc10e863fb785e187be2a16b3d726cdd 236 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 40 216 5.2E-19 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS13450 bc10e863fb785e187be2a16b3d726cdd 236 PANTHER PTHR32309:SF13 12 232 2.1E-67 T 23-04-2016 CLI_RS13450 bc10e863fb785e187be2a16b3d726cdd 236 PANTHER PTHR32309 12 232 2.1E-67 T 23-04-2016 CLI_RS13450 bc10e863fb785e187be2a16b3d726cdd 236 SUPERFAMILY SSF52540 39 221 8.95E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11850 48b8e722b9f4d3eb799196c3a650fe37 796 Gene3D G3DSA:3.40.50.300 532 675 5.1E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11850 48b8e722b9f4d3eb799196c3a650fe37 796 Pfam PF05272 Virulence-associated protein E 468 665 3.7E-78 T 23-04-2016 IPR007936 Virulence-associated E CLI_RS11850 48b8e722b9f4d3eb799196c3a650fe37 796 Gene3D G3DSA:3.40.50.300 520 531 1.7E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11850 48b8e722b9f4d3eb799196c3a650fe37 796 Gene3D G3DSA:3.40.50.300 717 744 1.7E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11850 48b8e722b9f4d3eb799196c3a650fe37 796 PANTHER PTHR34985 24 700 8.1E-53 T 23-04-2016 CLI_RS11850 48b8e722b9f4d3eb799196c3a650fe37 796 SUPERFAMILY SSF52540 432 657 3.8E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07135 6d1c9322260e3ab5ff4a50bcdeeb6110 253 PANTHER PTHR30151:SF8 1 251 2.5E-84 T 23-04-2016 CLI_RS07135 6d1c9322260e3ab5ff4a50bcdeeb6110 253 Gene3D G3DSA:1.10.3720.10 59 252 1.0E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07135 6d1c9322260e3ab5ff4a50bcdeeb6110 253 PANTHER PTHR30151 1 251 2.5E-84 T 23-04-2016 CLI_RS07135 6d1c9322260e3ab5ff4a50bcdeeb6110 253 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 246 2.8E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07135 6d1c9322260e3ab5ff4a50bcdeeb6110 253 SUPERFAMILY SSF161098 60 246 4.71E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS02695 80e745c613dec871dbe178a4eb45b671 380 PANTHER PTHR30294 1 375 1.1E-120 T 23-04-2016 CLI_RS02695 80e745c613dec871dbe178a4eb45b671 380 Gene3D G3DSA:3.40.1710.10 47 119 3.5E-5 T 23-04-2016 CLI_RS02695 80e745c613dec871dbe178a4eb45b671 380 Pfam PF12698 ABC-2 family transporter protein 21 367 5.9E-38 T 23-04-2016 CLI_RS02695 80e745c613dec871dbe178a4eb45b671 380 PANTHER PTHR30294:SF21 1 375 1.1E-120 T 23-04-2016 CLI_RS01750 87cc160ab97757bdb16d68b96a55b8f1 310 Gene3D G3DSA:3.40.50.1980 38 151 1.7E-19 T 23-04-2016 CLI_RS01750 87cc160ab97757bdb16d68b96a55b8f1 310 Pfam PF01497 Periplasmic binding protein 69 284 2.6E-24 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CLI_RS01750 87cc160ab97757bdb16d68b96a55b8f1 310 SUPERFAMILY SSF53807 47 305 2.08E-45 T 23-04-2016 CLI_RS01750 87cc160ab97757bdb16d68b96a55b8f1 310 PANTHER PTHR30532 1 307 1.8E-55 T 23-04-2016 CLI_RS01750 87cc160ab97757bdb16d68b96a55b8f1 310 Gene3D G3DSA:3.40.50.1980 152 305 1.1E-22 T 23-04-2016 CLI_RS00755 6392f516385fd064660541cb89093103 486 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 18 475 3.2E-190 T 23-04-2016 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLI_RS00755 6392f516385fd064660541cb89093103 486 PANTHER PTHR22550:SF7 8 485 5.0E-176 T 23-04-2016 CLI_RS00755 6392f516385fd064660541cb89093103 486 PIRSF PIRSF005690 5 486 5.5E-181 T 23-04-2016 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLI_RS00755 6392f516385fd064660541cb89093103 486 PANTHER PTHR22550 8 485 5.0E-176 T 23-04-2016 CLI_RS09250 2307e21f29324109f7812760e897586c 289 Pfam PF05709 Phage tail protein 29 287 4.8E-36 T 23-04-2016 IPR008841 Siphovirus-type tail component CLI_RS09555 1ad0a039ad94ed3e9ef0c3d7770a0e89 198 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 20 197 5.4E-55 T 23-04-2016 IPR014195 Sporulation stage III, protein AG CLI_RS03105 de987ab18b448e8f0b56800286b6c477 233 Pfam PF04397 LytTr DNA-binding domain 134 223 6.4E-24 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 CLI_RS03105 de987ab18b448e8f0b56800286b6c477 233 PANTHER PTHR26402 1 142 7.4E-25 T 23-04-2016 CLI_RS03105 de987ab18b448e8f0b56800286b6c477 233 Gene3D G3DSA:3.40.50.2300 10 122 1.0E-15 T 23-04-2016 CLI_RS03105 de987ab18b448e8f0b56800286b6c477 233 Gene3D G3DSA:2.40.50.40 125 193 3.8E-25 T 23-04-2016 CLI_RS03105 de987ab18b448e8f0b56800286b6c477 233 PANTHER PTHR26402:SF472 1 142 7.4E-25 T 23-04-2016 CLI_RS03105 de987ab18b448e8f0b56800286b6c477 233 SUPERFAMILY SSF52172 13 140 1.57E-15 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS03105 de987ab18b448e8f0b56800286b6c477 233 Pfam PF00072 Response regulator receiver domain 19 108 4.7E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS03105 de987ab18b448e8f0b56800286b6c477 233 SMART SM00448 1 113 5.6E-7 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS03105 de987ab18b448e8f0b56800286b6c477 233 SMART SM00850 133 224 9.0E-29 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 CLI_RS11470 2ae96c37ac0d49134ea37072443f647a 78 PANTHER PTHR10245 1 75 4.1E-46 T 23-04-2016 CLI_RS11470 2ae96c37ac0d49134ea37072443f647a 78 Gene3D G3DSA:1.10.260.40 1 64 5.3E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS11470 2ae96c37ac0d49134ea37072443f647a 78 Pfam PF01381 Helix-turn-helix 5 52 1.6E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS11470 2ae96c37ac0d49134ea37072443f647a 78 SUPERFAMILY SSF47413 3 66 1.26E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS11470 2ae96c37ac0d49134ea37072443f647a 78 SMART SM00530 4 59 3.8E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS11470 2ae96c37ac0d49134ea37072443f647a 78 PANTHER PTHR10245:SF61 1 75 4.1E-46 T 23-04-2016 CLI_RS05420 635f6d6e6e1f737ad89f75857a75ed36 145 SUPERFAMILY SSF55729 1 141 5.66E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05420 635f6d6e6e1f737ad89f75857a75ed36 145 Gene3D G3DSA:3.40.630.30 1 135 1.2E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05420 635f6d6e6e1f737ad89f75857a75ed36 145 Pfam PF13673 Acetyltransferase (GNAT) domain 37 137 9.5E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 Pfam PF00009 Elongation factor Tu GTP binding domain 8 199 5.1E-54 T 23-04-2016 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 Gene3D G3DSA:2.40.30.10 211 307 3.2E-27 T 23-04-2016 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 Gene3D G3DSA:2.40.50.250 486 580 3.7E-35 T 23-04-2016 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 PANTHER PTHR23115:SF14 6 605 7.6E-291 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 PANTHER PTHR23115 6 605 7.6E-291 T 23-04-2016 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 SUPERFAMILY SSF50447 156 302 1.02E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 PRINTS PR00315 GTP-binding elongation factor signature 75 85 4.4E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 PRINTS PR00315 GTP-binding elongation factor signature 127 136 4.4E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.4E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 PRINTS PR00315 GTP-binding elongation factor signature 11 24 4.4E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 Pfam PF00679 Elongation factor G C-terminus 400 485 2.0E-23 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 Pfam PF03144 Elongation factor Tu domain 2 223 292 1.7E-9 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 SUPERFAMILY SSF54980 402 516 6.71E-29 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 SUPERFAMILY SSF54980 306 391 1.69E-15 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 602 3.0E-295 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 Gene3D G3DSA:3.30.70.240 405 485 3.0E-33 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 SUPERFAMILY SSF52540 5 211 3.13E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 Gene3D G3DSA:3.40.50.300 6 210 1.8E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 151 1.8E-23 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 SMART SM00838 401 487 7.8E-4 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CLI_RS12800 b3ccc3f6fda2f2c95ef40ccbdd57aa4c 608 Gene3D G3DSA:3.30.70.870 308 404 5.9E-39 T 23-04-2016 CLI_RS01390 24ba26beecc91b5736a01e2ce4dfdbcf 283 PRINTS PR00207 Flagellin signature 35 52 3.2E-19 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLI_RS01390 24ba26beecc91b5736a01e2ce4dfdbcf 283 PRINTS PR00207 Flagellin signature 74 93 3.2E-19 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLI_RS01390 24ba26beecc91b5736a01e2ce4dfdbcf 283 PRINTS PR00207 Flagellin signature 109 132 3.2E-19 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLI_RS01390 24ba26beecc91b5736a01e2ce4dfdbcf 283 SUPERFAMILY SSF64518 1 278 8.89E-85 T 23-04-2016 CLI_RS01390 24ba26beecc91b5736a01e2ce4dfdbcf 283 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 5.9E-42 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS01390 24ba26beecc91b5736a01e2ce4dfdbcf 283 Pfam PF00700 Bacterial flagellin C-terminal helical region 194 278 3.4E-17 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS01390 24ba26beecc91b5736a01e2ce4dfdbcf 283 Gene3D G3DSA:1.20.1330.10 52 235 1.3E-60 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS01390 24ba26beecc91b5736a01e2ce4dfdbcf 283 PANTHER PTHR30244:SF17 1 283 3.2E-174 T 23-04-2016 CLI_RS01390 24ba26beecc91b5736a01e2ce4dfdbcf 283 PANTHER PTHR30244 1 283 3.2E-174 T 23-04-2016 CLI_RS13135 3f71a66a1fe3169e391d1eac942e457a 461 SUPERFAMILY SSF47917 362 420 3.92E-6 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13135 3f71a66a1fe3169e391d1eac942e457a 461 Gene3D G3DSA:3.40.50.300 77 354 2.7E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13135 3f71a66a1fe3169e391d1eac942e457a 461 PANTHER PTHR15184 4 461 1.6E-273 T 23-04-2016 CLI_RS13135 3f71a66a1fe3169e391d1eac942e457a 461 PIRSF PIRSF039114 1 461 6.9E-244 T 23-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta CLI_RS13135 3f71a66a1fe3169e391d1eac942e457a 461 Gene3D G3DSA:1.10.1140.10 362 425 1.6E-5 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13135 3f71a66a1fe3169e391d1eac942e457a 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13135 3f71a66a1fe3169e391d1eac942e457a 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 74 1.1E-9 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13135 3f71a66a1fe3169e391d1eac942e457a 461 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 2 458 60.423 T 23-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta CLI_RS13135 3f71a66a1fe3169e391d1eac942e457a 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 349 1.7E-67 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLI_RS13135 3f71a66a1fe3169e391d1eac942e457a 461 PANTHER PTHR15184:SF11 4 461 1.6E-273 T 23-04-2016 CLI_RS13135 3f71a66a1fe3169e391d1eac942e457a 461 SUPERFAMILY SSF52540 78 354 5.31E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07240 d261941089ddcce22683ebcd9d950343 212 PANTHER PTHR10173:SF6 7 141 4.1E-42 T 23-04-2016 CLI_RS07240 d261941089ddcce22683ebcd9d950343 212 SUPERFAMILY SSF55068 5 143 4.97E-43 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CLI_RS07240 d261941089ddcce22683ebcd9d950343 212 Pfam PF01625 Peptide methionine sulfoxide reductase 9 143 8.5E-32 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CLI_RS07240 d261941089ddcce22683ebcd9d950343 212 PANTHER PTHR10173 7 141 4.1E-42 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 CLI_RS07240 d261941089ddcce22683ebcd9d950343 212 Gene3D G3DSA:3.30.1060.10 5 142 5.3E-40 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CLI_RS14040 67d63a92520dcc05a8c2c8996cd12d22 139 SUPERFAMILY SSF46785 27 136 2.73E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14040 67d63a92520dcc05a8c2c8996cd12d22 139 SMART SM00347 22 122 6.0E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS14040 67d63a92520dcc05a8c2c8996cd12d22 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 2.4E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS14040 67d63a92520dcc05a8c2c8996cd12d22 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 2.4E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS14040 67d63a92520dcc05a8c2c8996cd12d22 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 2.4E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS14040 67d63a92520dcc05a8c2c8996cd12d22 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 2.4E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS14040 67d63a92520dcc05a8c2c8996cd12d22 139 PANTHER PTHR33164 28 138 1.3E-15 T 23-04-2016 CLI_RS14040 67d63a92520dcc05a8c2c8996cd12d22 139 Gene3D G3DSA:1.10.10.10 27 138 2.7E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14040 67d63a92520dcc05a8c2c8996cd12d22 139 Pfam PF01047 MarR family 30 85 8.7E-8 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS16185 8c2b77219ca185856bf3889ecb5334d0 291 PANTHER PTHR30269:SF15 31 286 7.4E-115 T 23-04-2016 CLI_RS16185 8c2b77219ca185856bf3889ecb5334d0 291 Pfam PF01925 Sulfite exporter TauE/SafE 7 146 1.7E-8 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS16185 8c2b77219ca185856bf3889ecb5334d0 291 Pfam PF01925 Sulfite exporter TauE/SafE 169 283 1.7E-8 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS16185 8c2b77219ca185856bf3889ecb5334d0 291 PANTHER PTHR30269 31 286 7.4E-115 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS10925 0ba6b9d7981a9d1b39a77ba94c94aadd 148 PANTHER PTHR31750:SF4 4 146 7.7E-25 T 23-04-2016 CLI_RS10925 0ba6b9d7981a9d1b39a77ba94c94aadd 148 PANTHER PTHR31750 4 146 7.7E-25 T 23-04-2016 CLI_RS10925 0ba6b9d7981a9d1b39a77ba94c94aadd 148 Pfam PF12638 Staygreen protein 3 146 8.0E-56 T 23-04-2016 IPR024438 Staygreen protein CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 256 6.0E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 SUPERFAMILY SSF161098 9 258 1.03E-61 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 Gene3D G3DSA:3.40.190.10 402 534 1.4E-15 T 23-04-2016 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 PANTHER PTHR30222 254 613 2.1E-239 T 23-04-2016 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 414 428 2.0E-48 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 469 488 2.0E-48 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 389 405 2.0E-48 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 432 451 2.0E-48 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 299 315 2.0E-48 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 513 532 2.0E-48 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 342 356 2.0E-48 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 358 371 2.0E-48 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 315 336 2.0E-48 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 558 584 2.0E-48 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 PANTHER PTHR30222:SF1 254 613 2.1E-239 T 23-04-2016 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 Gene3D G3DSA:1.10.3720.10 9 261 3.6E-67 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 Pfam PF13416 Bacterial extracellular solute-binding protein 309 567 3.2E-33 T 23-04-2016 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 Gene3D G3DSA:3.40.190.10 535 578 6.9E-57 T 23-04-2016 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 Gene3D G3DSA:3.40.190.10 292 398 6.9E-57 T 23-04-2016 CLI_RS03040 5a7806b435e16c27710abfe5449f4bf9 614 SUPERFAMILY SSF53850 294 610 4.35E-84 T 23-04-2016 CLI_RS11175 e952502d6df6244a8455c112a736f50d 342 Gene3D G3DSA:3.90.1150.10 251 341 3.1E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS11175 e952502d6df6244a8455c112a736f50d 342 SUPERFAMILY SSF53383 1 340 3.48E-71 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS11175 e952502d6df6244a8455c112a736f50d 342 PANTHER PTHR10289 1 342 3.0E-165 T 23-04-2016 CLI_RS11175 e952502d6df6244a8455c112a736f50d 342 Gene3D G3DSA:3.40.640.10 1 248 8.0E-58 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS11175 e952502d6df6244a8455c112a736f50d 342 Pfam PF01212 Beta-eliminating lyase 17 287 5.6E-35 T 23-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 CLI_RS11175 e952502d6df6244a8455c112a736f50d 342 PANTHER PTHR10289:SF8 1 342 3.0E-165 T 23-04-2016 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 PANTHER PTHR21256 16 435 2.7E-221 T 23-04-2016 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 PRINTS PR00083 Histidinol dehydrogenase signature 172 198 3.0E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 PRINTS PR00083 Histidinol dehydrogenase signature 322 347 3.0E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 PRINTS PR00083 Histidinol dehydrogenase signature 231 252 3.0E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 PRINTS PR00083 Histidinol dehydrogenase signature 363 381 3.0E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 PRINTS PR00083 Histidinol dehydrogenase signature 253 272 3.0E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 PRINTS PR00083 Histidinol dehydrogenase signature 202 227 3.0E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 3.0E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 PRINTS PR00083 Histidinol dehydrogenase signature 34 58 3.0E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 SUPERFAMILY SSF53720 26 431 2.35E-84 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 34 428 9.5E-172 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 429 43.723 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 231 263 - T 23-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 PIRSF PIRSF000099 2 432 8.1E-178 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 Pfam PF00815 Histidinol dehydrogenase 21 429 3.5E-178 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CLI_RS08055 2c9e990f325937c02f1a6b7ae6f41394 436 Gene3D G3DSA:3.40.50.1980 28 241 5.1E-79 T 23-04-2016 CLI_RS03620 55b2b53b7b34f0e65ca02f59aeefda88 346 SUPERFAMILY SSF81345 11 341 3.66E-85 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS03620 55b2b53b7b34f0e65ca02f59aeefda88 346 Gene3D G3DSA:1.10.3470.10 18 345 7.2E-103 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS03620 55b2b53b7b34f0e65ca02f59aeefda88 346 PANTHER PTHR30472 1 345 1.8E-150 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS03620 55b2b53b7b34f0e65ca02f59aeefda88 346 Pfam PF01032 FecCD transport family 30 341 6.2E-98 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS03620 55b2b53b7b34f0e65ca02f59aeefda88 346 PANTHER PTHR30472:SF16 1 345 1.8E-150 T 23-04-2016 CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 PANTHER PTHR21342 1 162 1.1E-83 T 23-04-2016 CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 60 6.3E-19 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 SUPERFAMILY SSF52374 1 156 5.14E-46 T 23-04-2016 CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 34.767 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 4.4E-63 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 PANTHER PTHR21342:SF1 1 162 1.1E-83 T 23-04-2016 CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 Gene3D G3DSA:3.40.50.620 1 157 1.3E-56 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 4.7E-48 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 4.7E-48 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 4.7E-48 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 4.7E-48 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 4.7E-48 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CLI_RS12470 9cca8a24baabd0f199b79e98d4ddfe99 164 Pfam PF01467 Cytidylyltransferase-like 5 133 2.6E-23 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLI_RS17220 852435b62c8e136425491fdf8804907e 116 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 113 2.2E-41 T 23-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 CLI_RS17220 852435b62c8e136425491fdf8804907e 116 PANTHER PTHR33866:SF2 2 113 1.8E-44 T 23-04-2016 CLI_RS17220 852435b62c8e136425491fdf8804907e 116 Gene3D G3DSA:3.60.90.10 3 114 5.9E-39 T 23-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 CLI_RS17220 852435b62c8e136425491fdf8804907e 116 PANTHER PTHR33866 2 113 1.8E-44 T 23-04-2016 CLI_RS17220 852435b62c8e136425491fdf8804907e 116 SUPERFAMILY SSF56276 3 114 1.31E-33 T 23-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 CLI_RS17220 852435b62c8e136425491fdf8804907e 116 Pfam PF02675 S-adenosylmethionine decarboxylase 7 113 7.5E-36 T 23-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 CLI_RS17220 852435b62c8e136425491fdf8804907e 116 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 114 24.717 T 23-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 CLI_RS11705 b0ae42e8d01968fde4b5770550f35c65 393 Pfam PF12571 Phage tail-collar fibre protein 1 150 2.7E-63 T 23-04-2016 IPR022225 Phage tail fibre protein CLI_RS11705 b0ae42e8d01968fde4b5770550f35c65 393 PANTHER PTHR35191 1 295 7.9E-63 T 23-04-2016 CLI_RS11420 1737a3c4b43c74fe57def43cca2b4c88 319 Gene3D G3DSA:1.10.10.60 269 317 2.3E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS11420 1737a3c4b43c74fe57def43cca2b4c88 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 315 1.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS11420 1737a3c4b43c74fe57def43cca2b4c88 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 284 299 1.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLI_RS11420 1737a3c4b43c74fe57def43cca2b4c88 319 PANTHER PTHR11019 13 319 2.7E-128 T 23-04-2016 CLI_RS11420 1737a3c4b43c74fe57def43cca2b4c88 319 Gene3D G3DSA:1.10.10.60 215 268 4.5E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS11420 1737a3c4b43c74fe57def43cca2b4c88 319 SMART SM00342 232 315 1.2E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS11420 1737a3c4b43c74fe57def43cca2b4c88 319 PANTHER PTHR11019:SF141 13 319 2.7E-128 T 23-04-2016 CLI_RS11420 1737a3c4b43c74fe57def43cca2b4c88 319 SUPERFAMILY SSF46689 268 318 2.28E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS11420 1737a3c4b43c74fe57def43cca2b4c88 319 Pfam PF12833 Helix-turn-helix domain 241 317 4.5E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLI_RS14520 5421755f5a0c89a231bb41e462df9c15 216 Pfam PF13346 ABC-2 family transporter protein 3 211 5.2E-31 T 23-04-2016 IPR025699 ABC-2 membrane transporter-like CLI_RS14520 5421755f5a0c89a231bb41e462df9c15 216 PANTHER PTHR41309 2 215 1.7E-73 T 23-04-2016 CLI_RS14520 5421755f5a0c89a231bb41e462df9c15 216 PANTHER PTHR41309:SF2 2 215 1.7E-73 T 23-04-2016 CLI_RS12510 95f1029dc1321db73d0fc1ab60cf31a2 214 Gene3D G3DSA:2.60.120.320 128 208 3.7E-6 T 23-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 CLI_RS12510 95f1029dc1321db73d0fc1ab60cf31a2 214 Gene3D G3DSA:3.40.50.10240 1 127 9.9E-36 T 23-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 CLI_RS12510 95f1029dc1321db73d0fc1ab60cf31a2 214 SUPERFAMILY SSF63862 133 207 2.75E-6 T 23-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 CLI_RS12510 95f1029dc1321db73d0fc1ab60cf31a2 214 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 18 127 6.3E-28 T 23-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 CLI_RS12510 95f1029dc1321db73d0fc1ab60cf31a2 214 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 145 203 3.0E-12 T 23-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 CLI_RS12510 95f1029dc1321db73d0fc1ab60cf31a2 214 PANTHER PTHR13622 3 201 1.6E-38 T 23-04-2016 CLI_RS12510 95f1029dc1321db73d0fc1ab60cf31a2 214 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 5 207 1.5E-55 T 23-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 CLI_RS12510 95f1029dc1321db73d0fc1ab60cf31a2 214 SMART SM00983 138 205 5.9E-18 T 23-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 CLI_RS12510 95f1029dc1321db73d0fc1ab60cf31a2 214 SUPERFAMILY SSF63999 1 131 2.22E-36 T 23-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 CLI_RS14670 9f438c3e47a37949fe849b9aeeac3f87 166 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 132 142 - T 23-04-2016 IPR020549 Endoribonuclease YbeY, conserved site CLI_RS14670 9f438c3e47a37949fe849b9aeeac3f87 166 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 166 22.993 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CLI_RS14670 9f438c3e47a37949fe849b9aeeac3f87 166 SUPERFAMILY SSF55486 1 165 9.03E-43 T 23-04-2016 CLI_RS14670 9f438c3e47a37949fe849b9aeeac3f87 166 Gene3D G3DSA:3.40.390.30 5 165 1.6E-46 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CLI_RS14670 9f438c3e47a37949fe849b9aeeac3f87 166 Pfam PF02130 Uncharacterized protein family UPF0054 12 162 1.4E-46 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CLI_RS14670 9f438c3e47a37949fe849b9aeeac3f87 166 PANTHER PTHR22881 1 166 1.0E-48 T 23-04-2016 CLI_RS14670 9f438c3e47a37949fe849b9aeeac3f87 166 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 162 4.2E-38 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CLI_RS02355 d5ca225af6f884d212437b470d10c67d 71 PANTHER PTHR37304 1 71 2.6E-33 T 23-04-2016 CLI_RS02355 d5ca225af6f884d212437b470d10c67d 71 Pfam PF04070 Domain of unknown function (DUF378) 2 59 3.5E-28 T 23-04-2016 IPR007211 Protein of unknown function DUF378 CLI_RS02355 d5ca225af6f884d212437b470d10c67d 71 PANTHER PTHR37304:SF1 1 71 2.6E-33 T 23-04-2016 CLI_RS08575 e4310aad2a0eb985365d7028c7afa668 69 Gene3D G3DSA:2.60.40.790 15 66 1.1E-9 T 23-04-2016 IPR008978 HSP20-like chaperone CLI_RS08575 e4310aad2a0eb985365d7028c7afa668 69 PANTHER PTHR11527 1 66 3.2E-17 T 23-04-2016 IPR031107 Small heat shock protein HSP20 CLI_RS08575 e4310aad2a0eb985365d7028c7afa668 69 SUPERFAMILY SSF49764 15 66 1.99E-9 T 23-04-2016 IPR008978 HSP20-like chaperone CLI_RS08575 e4310aad2a0eb985365d7028c7afa668 69 PANTHER PTHR11527:SF119 1 66 3.2E-17 T 23-04-2016 CLI_RS01725 26930672b211582f2b8d78d650c8b99b 343 Gene3D G3DSA:3.40.50.1980 64 186 2.0E-13 T 23-04-2016 CLI_RS01725 26930672b211582f2b8d78d650c8b99b 343 Pfam PF01497 Periplasmic binding protein 74 313 3.4E-24 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CLI_RS01725 26930672b211582f2b8d78d650c8b99b 343 Gene3D G3DSA:3.40.50.1980 189 341 6.3E-24 T 23-04-2016 CLI_RS01725 26930672b211582f2b8d78d650c8b99b 343 PANTHER PTHR30535 52 343 2.6E-54 T 23-04-2016 CLI_RS01725 26930672b211582f2b8d78d650c8b99b 343 PANTHER PTHR30535:SF5 52 343 2.6E-54 T 23-04-2016 CLI_RS01725 26930672b211582f2b8d78d650c8b99b 343 SUPERFAMILY SSF53807 65 340 5.1E-40 T 23-04-2016 CLI_RS15005 002a60d3f7b35e30d858649e375f1e56 259 SMART SM00646 67 171 5.7E-12 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS15005 002a60d3f7b35e30d858649e375f1e56 259 SMART SM00287 196 258 2.8E-7 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS15005 002a60d3f7b35e30d858649e375f1e56 259 PANTHER PTHR30404 7 208 6.0E-19 T 23-04-2016 CLI_RS15005 002a60d3f7b35e30d858649e375f1e56 259 Gene3D G3DSA:3.40.630.40 5 172 1.0E-24 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS15005 002a60d3f7b35e30d858649e375f1e56 259 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 5 170 1.6E-22 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS15005 002a60d3f7b35e30d858649e375f1e56 259 SUPERFAMILY SSF53187 3 172 9.1E-31 T 23-04-2016 CLI_RS15005 002a60d3f7b35e30d858649e375f1e56 259 Pfam PF08239 Bacterial SH3 domain 204 255 9.8E-11 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CLI_RS15330 f988216386389e4003260ab9126a41f3 297 Gene3D G3DSA:3.30.460.10 7 82 5.8E-12 T 23-04-2016 CLI_RS15330 f988216386389e4003260ab9126a41f3 297 Pfam PF01909 Nucleotidyltransferase domain 15 95 2.2E-10 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CLI_RS15330 f988216386389e4003260ab9126a41f3 297 SUPERFAMILY SSF81301 5 81 1.1E-12 T 23-04-2016 CLI_RS11510 d37bb52cafedb640d9daac63f02be474 170 Pfam PF14279 HNH endonuclease 39 75 5.9E-7 T 23-04-2016 IPR029471 HNH endonuclease 5 CLI_RS11510 d37bb52cafedb640d9daac63f02be474 170 SMART SM00507 27 74 2.0E-5 T 23-04-2016 IPR003615 HNH nuclease CLI_RS14320 17b14eea9755e54f647b95af14612047 205 Gene3D G3DSA:3.40.50.170 2 199 2.3E-58 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLI_RS14320 17b14eea9755e54f647b95af14612047 205 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 191 30.502 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 CLI_RS14320 17b14eea9755e54f647b95af14612047 205 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 195 5.6E-61 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 CLI_RS14320 17b14eea9755e54f647b95af14612047 205 PANTHER PTHR10520 1 197 7.9E-93 T 23-04-2016 CLI_RS14320 17b14eea9755e54f647b95af14612047 205 SUPERFAMILY SSF53328 3 201 7.59E-52 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLI_RS14320 17b14eea9755e54f647b95af14612047 205 Pfam PF00551 Formyl transferase 3 185 9.2E-50 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLI_RS17520 420acc909a2bc36aa3602fdaad6b9295 131 PIRSF PIRSF011474 1 130 1.5E-42 T 23-04-2016 IPR009693 Glucitol operon activator CLI_RS17520 420acc909a2bc36aa3602fdaad6b9295 131 Pfam PF06923 Glucitol operon activator protein (GutM) 5 106 7.2E-37 T 23-04-2016 IPR009693 Glucitol operon activator CLI_RS14960 b13c99a1315bbede4eacaf1ae6289cb8 179 SUPERFAMILY SSF55729 9 156 2.7E-5 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS14960 b13c99a1315bbede4eacaf1ae6289cb8 179 Pfam PF13420 Acetyltransferase (GNAT) domain 43 158 1.7E-7 T 23-04-2016 CLI_RS14960 b13c99a1315bbede4eacaf1ae6289cb8 179 Gene3D G3DSA:3.40.630.30 6 155 1.1E-4 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS17780 6bdecf664c2fac964f03f61cc0b1a887 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 44.121 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17780 6bdecf664c2fac964f03f61cc0b1a887 180 Gene3D G3DSA:3.30.1440.10 2 179 1.6E-80 T 23-04-2016 IPR022803 Ribosomal protein L5 domain CLI_RS17780 6bdecf664c2fac964f03f61cc0b1a887 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 23-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17780 6bdecf664c2fac964f03f61cc0b1a887 180 SUPERFAMILY SSF55282 4 179 4.94E-79 T 23-04-2016 IPR022803 Ribosomal protein L5 domain CLI_RS17780 6bdecf664c2fac964f03f61cc0b1a887 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 3.0E-41 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal CLI_RS17780 6bdecf664c2fac964f03f61cc0b1a887 180 PIRSF PIRSF002161 1 180 1.3E-70 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 CLI_RS17780 6bdecf664c2fac964f03f61cc0b1a887 180 Pfam PF00281 Ribosomal protein L5 25 81 1.6E-30 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal CLI_RS17780 6bdecf664c2fac964f03f61cc0b1a887 180 PANTHER PTHR11994 1 179 5.4E-97 T 23-04-2016 CLI_RS12185 1fcfc4fe83caeed618438897b145f565 292 Pfam PF01926 50S ribosome-binding GTPase 122 191 1.5E-15 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS12185 1fcfc4fe83caeed618438897b145f565 292 Gene3D G3DSA:3.40.50.300 15 177 4.2E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12185 1fcfc4fe83caeed618438897b145f565 292 Gene3D G3DSA:1.10.1580.10 181 272 1.2E-30 T 23-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain CLI_RS12185 1fcfc4fe83caeed618438897b145f565 292 SUPERFAMILY SSF52540 9 271 1.77E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12185 1fcfc4fe83caeed618438897b145f565 292 PANTHER PTHR11089 3 282 2.8E-77 T 23-04-2016 CLI_RS12185 1fcfc4fe83caeed618438897b145f565 292 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 278 4.9E-108 T 23-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis CLI_RS12185 1fcfc4fe83caeed618438897b145f565 292 PIRSF PIRSF006230 1 283 1.9E-96 T 23-04-2016 IPR016478 GTPase, MTG1 CLI_RS05515 5f7fa538d9f5406f4703755e96a26d83 314 SUPERFAMILY SSF53807 39 306 1.65E-65 T 23-04-2016 CLI_RS05515 5f7fa538d9f5406f4703755e96a26d83 314 PANTHER PTHR30532:SF4 1 313 5.7E-148 T 23-04-2016 CLI_RS05515 5f7fa538d9f5406f4703755e96a26d83 314 Pfam PF01497 Periplasmic binding protein 56 290 1.3E-35 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CLI_RS05515 5f7fa538d9f5406f4703755e96a26d83 314 PANTHER PTHR30532 1 313 5.7E-148 T 23-04-2016 CLI_RS05515 5f7fa538d9f5406f4703755e96a26d83 314 Gene3D G3DSA:3.40.50.1980 38 161 1.1E-32 T 23-04-2016 CLI_RS05515 5f7fa538d9f5406f4703755e96a26d83 314 Gene3D G3DSA:3.40.50.1980 163 313 9.3E-35 T 23-04-2016 CLI_RS00855 e837ba0d083d500d300aabb99cec0a1b 150 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 135 2.8E-26 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLI_RS00855 e837ba0d083d500d300aabb99cec0a1b 150 PANTHER PTHR11717:SF14 1 150 8.3E-54 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CLI_RS00855 e837ba0d083d500d300aabb99cec0a1b 150 PANTHER PTHR11717 1 150 8.3E-54 T 23-04-2016 CLI_RS00855 e837ba0d083d500d300aabb99cec0a1b 150 Gene3D G3DSA:3.40.50.270 1 147 1.5E-34 T 23-04-2016 CLI_RS00855 e837ba0d083d500d300aabb99cec0a1b 150 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 9.0E-6 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CLI_RS00855 e837ba0d083d500d300aabb99cec0a1b 150 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 115 130 9.0E-6 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CLI_RS00855 e837ba0d083d500d300aabb99cec0a1b 150 SMART SM00226 1 143 1.4E-24 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLI_RS00855 e837ba0d083d500d300aabb99cec0a1b 150 SUPERFAMILY SSF52788 1 144 6.02E-32 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLI_RS17950 27c057b45fd160b6b0a7a8fcb3a0d669 250 PANTHER PTHR34934 1 242 1.1E-67 T 23-04-2016 CLI_RS17950 27c057b45fd160b6b0a7a8fcb3a0d669 250 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 2 214 4.4E-60 T 23-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CLI_RS17950 27c057b45fd160b6b0a7a8fcb3a0d669 250 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 1 223 31.351 T 23-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CLI_RS17950 27c057b45fd160b6b0a7a8fcb3a0d669 250 SUPERFAMILY SSF69796 1 224 3.66E-67 T 23-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CLI_RS17950 27c057b45fd160b6b0a7a8fcb3a0d669 250 Pfam PF02511 Thymidylate synthase complementing protein 4 209 2.1E-71 T 23-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CLI_RS12120 033506fa522b5e107b4b1e160692c9bd 265 Pfam PF01148 Cytidylyltransferase family 4 261 1.9E-57 T 23-04-2016 CLI_RS12120 033506fa522b5e107b4b1e160692c9bd 265 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 220 246 - T 23-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 CLI_RS12120 033506fa522b5e107b4b1e160692c9bd 265 PANTHER PTHR13773 1 263 6.4E-69 T 23-04-2016 CLI_RS04120 b53f2c65ebce11859f4f80ee996f80e6 77 TIGRFAM TIGR04540 CLB_0814_fam: conserved hypothetical protein 2 74 6.3E-29 T 23-04-2016 IPR030902 Conserved hypothetical protein CLI_RS10130 0d0915fa873eb785b67517b6a18ab031 353 PANTHER PTHR30511:SF3 1 353 1.4E-99 T 23-04-2016 CLI_RS10130 0d0915fa873eb785b67517b6a18ab031 353 Gene3D G3DSA:3.20.20.10 11 221 1.6E-17 T 23-04-2016 IPR029066 PLP-binding barrel CLI_RS10130 0d0915fa873eb785b67517b6a18ab031 353 PANTHER PTHR30511 1 353 1.4E-99 T 23-04-2016 CLI_RS10130 0d0915fa873eb785b67517b6a18ab031 353 SUPERFAMILY SSF51419 8 224 1.81E-27 T 23-04-2016 IPR029066 PLP-binding barrel CLI_RS10130 0d0915fa873eb785b67517b6a18ab031 353 Pfam PF01168 Alanine racemase, N-terminal domain 8 223 4.6E-18 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CLI_RS18270 94300cd7e0bd8e213ce3ffee5d90e2a9 95 Pfam PF04026 SpoVG 1 81 1.1E-39 T 23-04-2016 IPR007170 Stage V sporulation protein G GO:0030435 CLI_RS18270 94300cd7e0bd8e213ce3ffee5d90e2a9 95 PANTHER PTHR38429 2 95 8.3E-52 T 23-04-2016 CLI_RS18270 94300cd7e0bd8e213ce3ffee5d90e2a9 95 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 93 28.93 T 23-04-2016 IPR007170 Stage V sporulation protein G GO:0030435 CLI_RS18270 94300cd7e0bd8e213ce3ffee5d90e2a9 95 SUPERFAMILY SSF160537 1 85 9.55E-36 T 23-04-2016 IPR007170 Stage V sporulation protein G GO:0030435 CLI_RS18270 94300cd7e0bd8e213ce3ffee5d90e2a9 95 Gene3D G3DSA:3.30.1120.40 1 83 5.2E-41 T 23-04-2016 IPR007170 Stage V sporulation protein G GO:0030435 CLI_RS05800 502e349e5124fc958d5ad4d93e5019ff 412 Gene3D G3DSA:3.40.190.10 328 368 4.0E-22 T 23-04-2016 CLI_RS05800 502e349e5124fc958d5ad4d93e5019ff 412 Gene3D G3DSA:3.40.190.10 45 163 4.0E-22 T 23-04-2016 CLI_RS05800 502e349e5124fc958d5ad4d93e5019ff 412 SUPERFAMILY SSF53850 47 407 3.6E-36 T 23-04-2016 CLI_RS05800 502e349e5124fc958d5ad4d93e5019ff 412 PANTHER PTHR30006 3 221 1.2E-211 T 23-04-2016 CLI_RS05800 502e349e5124fc958d5ad4d93e5019ff 412 PANTHER PTHR30006 239 412 1.2E-211 T 23-04-2016 CLI_RS05800 502e349e5124fc958d5ad4d93e5019ff 412 PANTHER PTHR30006:SF12 3 221 1.2E-211 T 23-04-2016 CLI_RS05800 502e349e5124fc958d5ad4d93e5019ff 412 PANTHER PTHR30006:SF12 239 412 1.2E-211 T 23-04-2016 CLI_RS05800 502e349e5124fc958d5ad4d93e5019ff 412 Pfam PF13416 Bacterial extracellular solute-binding protein 68 367 1.3E-35 T 23-04-2016 CLI_RS05800 502e349e5124fc958d5ad4d93e5019ff 412 Gene3D G3DSA:3.40.190.10 168 327 1.7E-7 T 23-04-2016 CLI_RS05800 502e349e5124fc958d5ad4d93e5019ff 412 PIRSF PIRSF029172 1 411 5.3E-179 T 23-04-2016 IPR027020 Protein ynjB CLI_RS14845 0122ee02c145fb2caa2cca44a3167b1c 201 PANTHER PTHR12039 5 201 1.2E-57 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 CLI_RS14845 0122ee02c145fb2caa2cca44a3167b1c 201 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 65 5.1E-11 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLI_RS14845 0122ee02c145fb2caa2cca44a3167b1c 201 Pfam PF01467 Cytidylyltransferase-like 6 175 1.1E-31 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLI_RS14845 0122ee02c145fb2caa2cca44a3167b1c 201 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 201 30.305 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 CLI_RS14845 0122ee02c145fb2caa2cca44a3167b1c 201 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 200 3.5E-58 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 CLI_RS14845 0122ee02c145fb2caa2cca44a3167b1c 201 Gene3D G3DSA:3.40.50.620 5 200 7.5E-63 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS14845 0122ee02c145fb2caa2cca44a3167b1c 201 SUPERFAMILY SSF52374 5 201 3.85E-53 T 23-04-2016 CLI_RS02150 6c59291e53ff97b5a249a5df7532f02b 248 PANTHER PTHR24220 5 245 1.3E-98 T 23-04-2016 CLI_RS02150 6c59291e53ff97b5a249a5df7532f02b 248 Pfam PF00005 ABC transporter 19 172 4.8E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS02150 6c59291e53ff97b5a249a5df7532f02b 248 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS02150 6c59291e53ff97b5a249a5df7532f02b 248 Gene3D G3DSA:3.40.50.300 3 243 3.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02150 6c59291e53ff97b5a249a5df7532f02b 248 PANTHER PTHR24220:SF585 5 245 1.3E-98 T 23-04-2016 CLI_RS02150 6c59291e53ff97b5a249a5df7532f02b 248 SMART SM00382 28 220 7.8E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS02150 6c59291e53ff97b5a249a5df7532f02b 248 SUPERFAMILY SSF52540 3 235 3.27E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09380 f1f40b531f88a8608a9085e31f29797d 184 Gene3D G3DSA:3.40.1440.10 16 103 2.1E-14 T 23-04-2016 IPR027299 GIY-YIG domain CLI_RS09380 f1f40b531f88a8608a9085e31f29797d 184 Pfam PF01541 GIY-YIG catalytic domain 17 97 5.9E-8 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CLI_RS09380 f1f40b531f88a8608a9085e31f29797d 184 SUPERFAMILY SSF82771 16 98 7.98E-8 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CLI_RS09380 f1f40b531f88a8608a9085e31f29797d 184 Gene3D G3DSA:1.10.260.40 146 175 4.2E-4 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS07105 37502f76c75b18a40c9175cd25225a05 217 PANTHER PTHR24220:SF566 3 186 4.8E-61 T 23-04-2016 CLI_RS07105 37502f76c75b18a40c9175cd25225a05 217 SMART SM00382 28 204 1.7E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS07105 37502f76c75b18a40c9175cd25225a05 217 Pfam PF00005 ABC transporter 19 151 1.9E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS07105 37502f76c75b18a40c9175cd25225a05 217 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07105 37502f76c75b18a40c9175cd25225a05 217 PANTHER PTHR24220 3 186 4.8E-61 T 23-04-2016 CLI_RS07105 37502f76c75b18a40c9175cd25225a05 217 SUPERFAMILY SSF52540 1 201 2.77E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07105 37502f76c75b18a40c9175cd25225a05 217 Gene3D G3DSA:3.40.50.300 1 200 2.5E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00680 04ed8ced3958dfaaf48c73f72fb7a63c 336 Pfam PF01636 Phosphotransferase enzyme family 25 248 1.7E-13 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase CLI_RS00680 04ed8ced3958dfaaf48c73f72fb7a63c 336 Gene3D G3DSA:3.90.1200.10 98 327 1.3E-65 T 23-04-2016 CLI_RS00680 04ed8ced3958dfaaf48c73f72fb7a63c 336 PANTHER PTHR39179 1 333 5.8E-148 T 23-04-2016 CLI_RS00680 04ed8ced3958dfaaf48c73f72fb7a63c 336 PANTHER PTHR39179:SF1 1 333 5.8E-148 T 23-04-2016 CLI_RS00680 04ed8ced3958dfaaf48c73f72fb7a63c 336 SUPERFAMILY SSF56112 2 332 6.05E-53 T 23-04-2016 IPR011009 Protein kinase-like domain CLI_RS00680 04ed8ced3958dfaaf48c73f72fb7a63c 336 Gene3D G3DSA:3.30.200.20 3 94 7.7E-26 T 23-04-2016 CLI_RS00680 04ed8ced3958dfaaf48c73f72fb7a63c 336 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 16 331 1.3E-96 T 23-04-2016 IPR014255 Spore coat protein CotS CLI_RS09505 4eda06df049f69bd21417fb41a6cbd90 281 Gene3D G3DSA:2.60.200.30 138 249 5.9E-41 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLI_RS09505 4eda06df049f69bd21417fb41a6cbd90 281 PANTHER PTHR20275 2 270 8.9E-89 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLI_RS09505 4eda06df049f69bd21417fb41a6cbd90 281 SUPERFAMILY SSF111331 17 276 8.9E-80 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain CLI_RS09505 4eda06df049f69bd21417fb41a6cbd90 281 Pfam PF01513 ATP-NAD kinase 23 257 2.6E-58 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLI_RS09505 4eda06df049f69bd21417fb41a6cbd90 281 Gene3D G3DSA:3.40.50.10330 10 137 2.2E-31 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLI_RS09505 4eda06df049f69bd21417fb41a6cbd90 281 Hamap MF_00361 NAD kinase [nadK]. 2 273 31.64 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLI_RS10805 f6d53fdf87a793de897096bc09527487 117 Pfam PF16189 Creatinase/Prolidase N-terminal domain 1 69 1.2E-8 T 23-04-2016 CLI_RS01490 3fabd149758519a6c79f0778c52dac79 174 PANTHER PTHR38011 3 171 6.8E-15 T 23-04-2016 CLI_RS01490 3fabd149758519a6c79f0778c52dac79 174 Gene3D G3DSA:3.40.430.10 3 172 3.1E-30 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CLI_RS01490 3fabd149758519a6c79f0778c52dac79 174 SUPERFAMILY SSF53597 3 172 1.57E-31 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CLI_RS01490 3fabd149758519a6c79f0778c52dac79 174 Pfam PF01872 RibD C-terminal domain 3 152 2.2E-18 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CLI_RS05375 382d8b09f2dcd4a1da3622c5d25e9e02 297 PANTHER PTHR30126:SF31 1 297 2.2E-126 T 23-04-2016 CLI_RS05375 382d8b09f2dcd4a1da3622c5d25e9e02 297 SUPERFAMILY SSF46785 1 83 1.27E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05375 382d8b09f2dcd4a1da3622c5d25e9e02 297 Gene3D G3DSA:3.40.190.10 198 262 2.1E-10 T 23-04-2016 CLI_RS05375 382d8b09f2dcd4a1da3622c5d25e9e02 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS05375 382d8b09f2dcd4a1da3622c5d25e9e02 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS05375 382d8b09f2dcd4a1da3622c5d25e9e02 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS05375 382d8b09f2dcd4a1da3622c5d25e9e02 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.5E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLI_RS05375 382d8b09f2dcd4a1da3622c5d25e9e02 297 Gene3D G3DSA:3.40.190.10 83 197 1.0E-15 T 23-04-2016 CLI_RS05375 382d8b09f2dcd4a1da3622c5d25e9e02 297 Pfam PF03466 LysR substrate binding domain 90 289 3.0E-32 T 23-04-2016 IPR005119 LysR, substrate-binding CLI_RS05375 382d8b09f2dcd4a1da3622c5d25e9e02 297 SUPERFAMILY SSF53850 88 293 7.19E-29 T 23-04-2016 CLI_RS05375 382d8b09f2dcd4a1da3622c5d25e9e02 297 Gene3D G3DSA:1.10.10.10 1 79 1.4E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05375 382d8b09f2dcd4a1da3622c5d25e9e02 297 PANTHER PTHR30126 1 297 2.2E-126 T 23-04-2016 CLI_RS09940 3aadad0e031eb127529c3ba7f9959c72 430 PANTHER PTHR30501:SF2 1 428 6.8E-130 T 23-04-2016 CLI_RS09940 3aadad0e031eb127529c3ba7f9959c72 430 Pfam PF03313 Serine dehydratase alpha chain 133 420 7.3E-48 T 23-04-2016 IPR005130 Serine dehydratase-like, alpha subunit CLI_RS09940 3aadad0e031eb127529c3ba7f9959c72 430 PIRSF PIRSF006054 1 427 6.5E-131 T 23-04-2016 IPR021144 Uncharacterised protein family UPF0597 CLI_RS09940 3aadad0e031eb127529c3ba7f9959c72 430 PANTHER PTHR30501 1 428 6.8E-130 T 23-04-2016 CLI_RS09940 3aadad0e031eb127529c3ba7f9959c72 430 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 3 425 33.952 T 23-04-2016 IPR021144 Uncharacterised protein family UPF0597 CLI_RS18200 23ca4cb52282a7eef419d028b31e7c93 96 Pfam PF07873 YabP family 14 78 2.1E-19 T 23-04-2016 IPR022476 Sporulation protein YabP/YqfC CLI_RS18200 23ca4cb52282a7eef419d028b31e7c93 96 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 13 96 2.7E-34 T 23-04-2016 IPR012504 Sporulation protein YabP CLI_RS18200 23ca4cb52282a7eef419d028b31e7c93 96 PIRSF PIRSF011576 1 96 2.4E-17 T 23-04-2016 IPR012504 Sporulation protein YabP CLI_RS18200 23ca4cb52282a7eef419d028b31e7c93 96 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 15 96 8.0E-22 T 23-04-2016 IPR012504 Sporulation protein YabP CLI_RS05820 b2bc73fb5b6feca5cd22179c6c5c20fb 319 SUPERFAMILY SSF55729 143 300 5.19E-50 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05820 b2bc73fb5b6feca5cd22179c6c5c20fb 319 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 26 300 2.8E-44 T 23-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal CLI_RS05820 b2bc73fb5b6feca5cd22179c6c5c20fb 319 PANTHER PTHR41373 1 319 1.0E-118 T 23-04-2016 CLI_RS05820 b2bc73fb5b6feca5cd22179c6c5c20fb 319 Gene3D G3DSA:3.40.630.30 138 294 6.1E-60 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05820 b2bc73fb5b6feca5cd22179c6c5c20fb 319 PIRSF PIRSF018688 1 303 7.6E-84 T 23-04-2016 IPR016732 Uncharacterised conserved protein UCP018688 CLI_RS05820 b2bc73fb5b6feca5cd22179c6c5c20fb 319 SUPERFAMILY SSF55729 2 142 3.07E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05820 b2bc73fb5b6feca5cd22179c6c5c20fb 319 Gene3D G3DSA:3.40.630.30 2 137 3.0E-41 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04325 cf8195765475d8a9255fb10e22ae3ec6 204 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 186 6.6E-63 T 23-04-2016 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 CLI_RS04325 cf8195765475d8a9255fb10e22ae3ec6 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 193 4.1E-52 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CLI_RS04325 cf8195765475d8a9255fb10e22ae3ec6 204 SUPERFAMILY SSF53254 1 195 2.09E-54 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CLI_RS04325 cf8195765475d8a9255fb10e22ae3ec6 204 Gene3D G3DSA:3.40.50.1240 1 196 2.2E-57 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CLI_RS04325 cf8195765475d8a9255fb10e22ae3ec6 204 PIRSF PIRSF000709 1 177 3.5E-20 T 23-04-2016 CLI_RS04325 cf8195765475d8a9255fb10e22ae3ec6 204 PANTHER PTHR23029 1 201 2.9E-115 T 23-04-2016 CLI_RS04325 cf8195765475d8a9255fb10e22ae3ec6 204 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 23-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 CLI_RS04325 cf8195765475d8a9255fb10e22ae3ec6 204 SMART SM00855 2 161 1.3E-20 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CLI_RS04325 cf8195765475d8a9255fb10e22ae3ec6 204 PANTHER PTHR23029:SF33 1 201 2.9E-115 T 23-04-2016 CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 Pfam PF14903 WG containing repeat 254 288 5.5E-11 T 23-04-2016 IPR032774 WG containing repeat CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 Pfam PF14903 WG containing repeat 118 151 5.1E-10 T 23-04-2016 IPR032774 WG containing repeat CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 Pfam PF14903 WG containing repeat 50 83 1.8E-10 T 23-04-2016 IPR032774 WG containing repeat CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 Pfam PF14903 WG containing repeat 220 254 7.8E-9 T 23-04-2016 IPR032774 WG containing repeat CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 Pfam PF14903 WG containing repeat 16 48 0.0011 T 23-04-2016 IPR032774 WG containing repeat CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 Pfam PF14903 WG containing repeat 153 186 1.0E-11 T 23-04-2016 IPR032774 WG containing repeat CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 Pfam PF14903 WG containing repeat 288 316 2.6E-8 T 23-04-2016 IPR032774 WG containing repeat CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 Pfam PF14903 WG containing repeat 85 118 1.2E-10 T 23-04-2016 IPR032774 WG containing repeat CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 Pfam PF14903 WG containing repeat 186 215 5.0E-10 T 23-04-2016 IPR032774 WG containing repeat CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 SUPERFAMILY SSF69360 82 202 7.06E-15 T 23-04-2016 CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 SUPERFAMILY SSF69360 5 108 1.18E-5 T 23-04-2016 CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 SUPERFAMILY SSF69360 218 331 2.63E-8 T 23-04-2016 CLI_RS08520 3db5d3659e0971c7df4968391edd86ec 337 PANTHER PTHR37841 1 334 3.5E-84 T 23-04-2016 CLI_RS17270 a8decb647322c2286a2dabbfeb44a375 314 PANTHER PTHR34821 160 311 3.5E-40 T 23-04-2016 CLI_RS17270 a8decb647322c2286a2dabbfeb44a375 314 PANTHER PTHR34821:SF2 160 311 3.5E-40 T 23-04-2016 CLI_RS17270 a8decb647322c2286a2dabbfeb44a375 314 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 144 2.2E-30 T 23-04-2016 IPR006750 Putative inner membrane exporter, YdcZ CLI_RS17270 a8decb647322c2286a2dabbfeb44a375 314 Pfam PF04657 Putative inner membrane exporter, YdcZ 169 309 1.7E-37 T 23-04-2016 IPR006750 Putative inner membrane exporter, YdcZ CLI_RS17505 34b37007a15bc3b808eea034587e4ab9 121 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 9 116 5.0E-29 T 23-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS17505 34b37007a15bc3b808eea034587e4ab9 121 SUPERFAMILY SSF141530 3 118 1.7E-39 T 23-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS17505 34b37007a15bc3b808eea034587e4ab9 121 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 116 2.1E-42 T 23-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS17505 34b37007a15bc3b808eea034587e4ab9 121 Gene3D G3DSA:2.40.33.40 1 119 1.9E-45 T 23-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS17505 34b37007a15bc3b808eea034587e4ab9 121 PANTHER PTHR40398 2 121 5.3E-47 T 23-04-2016 CLI_RS06115 810a26c5673226f450d2cfa412ce5c5a 145 PANTHER PTHR33221 2 144 8.4E-58 T 23-04-2016 CLI_RS06115 810a26c5673226f450d2cfa412ce5c5a 145 Pfam PF02082 Transcriptional regulator 1 83 1.4E-24 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CLI_RS06115 810a26c5673226f450d2cfa412ce5c5a 145 PANTHER PTHR33221:SF1 2 144 8.4E-58 T 23-04-2016 CLI_RS06115 810a26c5673226f450d2cfa412ce5c5a 145 Gene3D G3DSA:1.10.10.10 1 138 2.6E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06115 810a26c5673226f450d2cfa412ce5c5a 145 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 2.2E-34 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CLI_RS06115 810a26c5673226f450d2cfa412ce5c5a 145 SUPERFAMILY SSF46785 2 133 3.73E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS13455 7d94eef6a3b79605d072f5622e02450d 257 PIRSF PIRSF016557 1 253 3.0E-81 T 23-04-2016 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 UniPathway: UPA00934 CLI_RS13455 7d94eef6a3b79605d072f5622e02450d 257 SUPERFAMILY SSF89550 1 199 1.31E-18 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CLI_RS13455 7d94eef6a3b79605d072f5622e02450d 257 PANTHER PTHR39181 2 257 8.2E-89 T 23-04-2016 CLI_RS13455 7d94eef6a3b79605d072f5622e02450d 257 Gene3D G3DSA:3.20.20.140 1 226 9.2E-12 T 23-04-2016 CLI_RS13455 7d94eef6a3b79605d072f5622e02450d 257 PANTHER PTHR39181:SF1 2 257 8.2E-89 T 23-04-2016 CLI_RS07635 30f6d60bae4401ef2686f2d972f9fb26 181 SUPERFAMILY SSF53056 24 178 6.41E-10 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLI_RS07635 30f6d60bae4401ef2686f2d972f9fb26 181 SMART SM00947 36 178 3.1E-7 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLI_RS07635 30f6d60bae4401ef2686f2d972f9fb26 181 Gene3D G3DSA:3.40.1050.10 29 110 4.6E-7 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLI_RS07635 30f6d60bae4401ef2686f2d972f9fb26 181 Pfam PF00484 Carbonic anhydrase 78 128 2.6E-5 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLI_RS12790 f9a790b3d0acd83785145468d3b92411 218 PANTHER PTHR10509 6 214 5.9E-67 T 23-04-2016 CLI_RS12790 f9a790b3d0acd83785145468d3b92411 218 SUPERFAMILY SSF53335 31 215 5.38E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS12790 f9a790b3d0acd83785145468d3b92411 218 Pfam PF01596 O-methyltransferase 18 213 1.5E-34 T 23-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 CLI_RS12790 f9a790b3d0acd83785145468d3b92411 218 Gene3D G3DSA:3.40.50.150 3 214 2.5E-63 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS12790 f9a790b3d0acd83785145468d3b92411 218 PANTHER PTHR10509:SF14 6 214 5.9E-67 T 23-04-2016 CLI_RS12810 0db2635382de31042b5f1115039e5f37 150 PANTHER PTHR33202 6 148 1.9E-47 T 23-04-2016 CLI_RS12810 0db2635382de31042b5f1115039e5f37 150 SUPERFAMILY SSF46785 10 145 9.49E-43 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12810 0db2635382de31042b5f1115039e5f37 150 Gene3D G3DSA:1.10.10.10 9 90 3.2E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12810 0db2635382de31042b5f1115039e5f37 150 Pfam PF01475 Ferric uptake regulator family 19 141 3.4E-40 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CLI_RS07315 8dbdb7124094d340b19ac52cb1ccf8f6 424 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 3.1E-8 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLI_RS07315 8dbdb7124094d340b19ac52cb1ccf8f6 424 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 3.1E-8 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLI_RS07315 8dbdb7124094d340b19ac52cb1ccf8f6 424 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 3.1E-8 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLI_RS07315 8dbdb7124094d340b19ac52cb1ccf8f6 424 SUPERFAMILY SSF56601 6 279 1.31E-57 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS07315 8dbdb7124094d340b19ac52cb1ccf8f6 424 Gene3D G3DSA:3.40.710.10 10 280 1.4E-74 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS07315 8dbdb7124094d340b19ac52cb1ccf8f6 424 PANTHER PTHR21581:SF10 8 404 1.2E-199 T 23-04-2016 CLI_RS07315 8dbdb7124094d340b19ac52cb1ccf8f6 424 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 257 5.2E-48 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CLI_RS07315 8dbdb7124094d340b19ac52cb1ccf8f6 424 PANTHER PTHR21581 8 404 1.2E-199 T 23-04-2016 CLI_RS09150 9dcfd25f8d6f1b4dbb28f513d335062c 291 PANTHER PTHR30349 1 291 2.1E-104 T 23-04-2016 CLI_RS09150 9dcfd25f8d6f1b4dbb28f513d335062c 291 Gene3D G3DSA:1.10.150.130 1 94 1.3E-24 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CLI_RS09150 9dcfd25f8d6f1b4dbb28f513d335062c 291 Pfam PF00589 Phage integrase family 108 275 3.8E-41 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS09150 9dcfd25f8d6f1b4dbb28f513d335062c 291 SUPERFAMILY SSF56349 2 280 1.18E-52 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLI_RS09150 9dcfd25f8d6f1b4dbb28f513d335062c 291 Gene3D G3DSA:1.10.443.10 108 280 9.5E-47 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS09150 9dcfd25f8d6f1b4dbb28f513d335062c 291 PANTHER PTHR30349:SF5 1 291 2.1E-104 T 23-04-2016 CLI_RS09150 9dcfd25f8d6f1b4dbb28f513d335062c 291 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 291 27.659 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD CLI_RS09150 9dcfd25f8d6f1b4dbb28f513d335062c 291 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 291 2.8E-103 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CLI_RS09150 9dcfd25f8d6f1b4dbb28f513d335062c 291 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 85 2.0E-16 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLI_RS16725 8c4c92bf576ae9966f73ed17ecb0d38c 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 5.4E-30 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CLI_RS16725 8c4c92bf576ae9966f73ed17ecb0d38c 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 22.322 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CLI_RS16725 8c4c92bf576ae9966f73ed17ecb0d38c 95 SUPERFAMILY SSF141000 2 93 3.79E-27 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CLI_RS16725 8c4c92bf576ae9966f73ed17ecb0d38c 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.8E-14 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CLI_RS16725 8c4c92bf576ae9966f73ed17ecb0d38c 95 PANTHER PTHR15004:SF0 1 95 9.9E-29 T 23-04-2016 CLI_RS16725 8c4c92bf576ae9966f73ed17ecb0d38c 95 PANTHER PTHR15004 1 95 9.9E-29 T 23-04-2016 CLI_RS09050 b0738d5348697393eee83455c027b20d 368 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 231 342 5.1E-14 T 23-04-2016 IPR015032 MTH538 TIR-like domain CLI_RS09050 b0738d5348697393eee83455c027b20d 368 SUPERFAMILY SSF52206 284 366 1.01E-5 T 23-04-2016 IPR015032 MTH538 TIR-like domain CLI_RS09050 b0738d5348697393eee83455c027b20d 368 Gene3D G3DSA:3.40.50.9200 229 367 9.1E-6 T 23-04-2016 IPR015032 MTH538 TIR-like domain CLI_RS09130 47b8d5999b6f067b901a7b5fa7149e10 352 SUPERFAMILY SSF56219 52 352 3.27E-31 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CLI_RS09130 47b8d5999b6f067b901a7b5fa7149e10 352 Gene3D G3DSA:3.60.10.10 56 350 2.4E-13 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CLI_RS09130 47b8d5999b6f067b901a7b5fa7149e10 352 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 58 342 6.2E-11 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CLI_RS12330 e028d7ed027de22e1b5c3554986a6585 361 Gene3D G3DSA:2.40.420.10 16 105 6.0E-27 T 23-04-2016 CLI_RS12330 e028d7ed027de22e1b5c3554986a6585 361 Gene3D G3DSA:3.40.50.10690 119 361 1.6E-99 T 23-04-2016 CLI_RS16240 e028d7ed027de22e1b5c3554986a6585 361 Gene3D G3DSA:2.40.420.10 16 105 6.0E-27 T 23-04-2016 CLI_RS16240 e028d7ed027de22e1b5c3554986a6585 361 Gene3D G3DSA:3.40.50.10690 119 361 1.6E-99 T 23-04-2016 CLI_RS12560 cc84140fa32a099104343732c0a68f03 735 SMART SM00487 197 392 7.3E-22 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLI_RS12560 cc84140fa32a099104343732c0a68f03 735 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 734 24.093 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CLI_RS12560 cc84140fa32a099104343732c0a68f03 735 Pfam PF00270 DEAD/DEAH box helicase 205 362 1.5E-13 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLI_RS12560 cc84140fa32a099104343732c0a68f03 735 PANTHER PTHR30580 1 735 1.4E-273 T 23-04-2016 CLI_RS12560 cc84140fa32a099104343732c0a68f03 735 Pfam PF00271 Helicase conserved C-terminal domain 514 591 4.6E-9 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS12560 cc84140fa32a099104343732c0a68f03 735 SUPERFAMILY SSF52540 506 600 2.21E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12560 cc84140fa32a099104343732c0a68f03 735 SUPERFAMILY SSF52540 389 443 2.21E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12560 cc84140fa32a099104343732c0a68f03 735 SUPERFAMILY SSF52540 212 362 2.21E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12560 cc84140fa32a099104343732c0a68f03 735 SMART SM00490 495 592 4.9E-9 T 23-04-2016 IPR001650 Helicase, C-terminal CLI_RS12560 cc84140fa32a099104343732c0a68f03 735 Gene3D G3DSA:3.40.50.300 458 636 5.9E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12560 cc84140fa32a099104343732c0a68f03 735 Gene3D G3DSA:3.40.50.300 199 382 1.1E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12560 cc84140fa32a099104343732c0a68f03 735 TIGRFAM TIGR00595 priA: primosomal protein N' 221 731 2.7E-204 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CLI_RS13410 cd8e6db267ac8eeeb37cbb90aa08d82c 305 SUPERFAMILY SSF51735 1 304 3.43E-91 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS13410 cd8e6db267ac8eeeb37cbb90aa08d82c 305 Gene3D G3DSA:3.40.50.720 1 172 9.0E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS13410 cd8e6db267ac8eeeb37cbb90aa08d82c 305 PANTHER PTHR10366:SF466 2 305 9.3E-112 T 23-04-2016 CLI_RS13410 cd8e6db267ac8eeeb37cbb90aa08d82c 305 Gene3D G3DSA:3.90.25.10 173 291 1.7E-32 T 23-04-2016 CLI_RS13410 cd8e6db267ac8eeeb37cbb90aa08d82c 305 PANTHER PTHR10366 2 305 9.3E-112 T 23-04-2016 CLI_RS13410 cd8e6db267ac8eeeb37cbb90aa08d82c 305 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 295 3.1E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS11350 de6fe422f4d1fdeb05acacc7d403d40b 89 Pfam PF07659 Domain of Unknown Function (DUF1599) 22 85 2.1E-18 T 23-04-2016 IPR011630 Clostridium phage phiCTP1, Gp74 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 Gene3D G3DSA:3.30.930.10 140 285 3.1E-111 T 23-04-2016 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 Gene3D G3DSA:3.30.930.10 418 588 3.1E-111 T 23-04-2016 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 9 568 36.104 T 23-04-2016 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 PANTHER PTHR22594:SF5 1 306 1.6E-257 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 PANTHER PTHR22594:SF5 374 576 1.6E-257 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 ProDom PD609240 SUBUNIT E AMIDOTRANSFERASE 6.3.5.- LIGASE GLUTAMYL-TRNAGLN GLU-ADT BIOSYNTHESIS TRANSFERASE B 301 413 0.003 T 23-04-2016 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 Pfam PF01336 OB-fold nucleic acid binding domain 26 109 4.8E-16 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 PRINTS PR01042 Aspartyl-tRNA synthetase signature 216 229 3.3E-25 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 PRINTS PR01042 Aspartyl-tRNA synthetase signature 523 537 3.3E-25 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 PRINTS PR01042 Aspartyl-tRNA synthetase signature 479 495 3.3E-25 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 PRINTS PR01042 Aspartyl-tRNA synthetase signature 199 211 3.3E-25 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 PANTHER PTHR22594 1 306 1.6E-257 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 PANTHER PTHR22594 374 576 1.6E-257 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 SUPERFAMILY SSF50249 8 116 6.29E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 9 589 2.3E-237 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 SUPERFAMILY SSF55261 298 424 6.05E-46 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 Gene3D G3DSA:2.40.50.140 9 115 2.6E-36 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 SUPERFAMILY SSF55681 117 301 2.13E-102 T 23-04-2016 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 SUPERFAMILY SSF55681 429 589 2.13E-102 T 23-04-2016 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 Pfam PF02938 GAD domain 317 409 3.2E-27 T 23-04-2016 IPR029351 GAD domain CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 Pfam PF00152 tRNA synthetases class II (D, K and N) 126 563 2.3E-108 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CLI_RS15215 64acf040aa3891400c0a8654d1cab6e9 593 Gene3D G3DSA:3.30.1360.30 286 417 4.3E-50 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 SUPERFAMILY SSF47203 225 376 1.27E-61 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 Gene3D G3DSA:2.40.110.10 119 220 5.0E-39 T 23-04-2016 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 8.1E-27 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 Gene3D G3DSA:1.10.540.10 3 117 4.6E-36 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 PANTHER PTHR10909 3 372 5.0E-177 T 23-04-2016 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 SUPERFAMILY SSF56645 2 238 3.53E-84 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 PANTHER PTHR10909:SF10 3 372 5.0E-177 T 23-04-2016 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 116 2.2E-33 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 1.3E-53 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 PIRSF PIRSF016578 4 376 3.6E-30 T 23-04-2016 CLI_RS10975 f6f0a415cc52342805b51710560cf128 377 Gene3D G3DSA:1.20.140.10 221 377 8.4E-74 T 23-04-2016 CLI_RS02200 2a13a2f2ac400a148dae1eb0e6b0de89 350 Gene3D G3DSA:1.10.3210.10 124 286 7.9E-22 T 23-04-2016 IPR006674 HD domain CLI_RS02200 2a13a2f2ac400a148dae1eb0e6b0de89 350 TIGRFAM TIGR00277 HDIG: HDIG domain 152 218 2.1E-7 T 23-04-2016 IPR006675 HDIG domain CLI_RS02200 2a13a2f2ac400a148dae1eb0e6b0de89 350 SMART SM00471 123 259 2.4E-10 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS02200 2a13a2f2ac400a148dae1eb0e6b0de89 350 Pfam PF01966 HD domain 127 249 1.6E-17 T 23-04-2016 IPR006674 HD domain CLI_RS02200 2a13a2f2ac400a148dae1eb0e6b0de89 350 SUPERFAMILY SSF109604 118 287 3.93E-34 T 23-04-2016 CLI_RS18435 ae65dfbd81d36e23ee162fc1fa444f4f 241 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 24 148 3.1E-13 T 23-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 CLI_RS18435 ae65dfbd81d36e23ee162fc1fa444f4f 241 TIGRFAM TIGR04483 D_pro_red_PrdB: D-proline reductase (dithiol), PrdB protein 4 241 2.9E-140 T 23-04-2016 IPR022787 D-proline reductase (dithiol), PrdB protein GO:0050002|GO:0055114 KEGG: 00330+1.21.4.1 CLI_RS18435 ae65dfbd81d36e23ee162fc1fa444f4f 241 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 23 221 5.5E-21 T 23-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 CLI_RS13355 438a466cfdbe21954cbc95477af70bad 284 PRINTS PR00207 Flagellin signature 109 132 3.0E-11 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLI_RS13355 438a466cfdbe21954cbc95477af70bad 284 PRINTS PR00207 Flagellin signature 35 52 3.0E-11 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLI_RS13355 438a466cfdbe21954cbc95477af70bad 284 PRINTS PR00207 Flagellin signature 74 93 3.0E-11 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLI_RS13355 438a466cfdbe21954cbc95477af70bad 284 Pfam PF00700 Bacterial flagellin C-terminal helical region 193 278 3.6E-14 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS13355 438a466cfdbe21954cbc95477af70bad 284 PANTHER PTHR30244:SF1 1 281 1.1E-79 T 23-04-2016 CLI_RS13355 438a466cfdbe21954cbc95477af70bad 284 SUPERFAMILY SSF64518 1 278 1.7E-66 T 23-04-2016 CLI_RS13355 438a466cfdbe21954cbc95477af70bad 284 Gene3D G3DSA:1.20.1330.10 55 233 3.0E-45 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS13355 438a466cfdbe21954cbc95477af70bad 284 PANTHER PTHR30244 1 281 1.1E-79 T 23-04-2016 CLI_RS13355 438a466cfdbe21954cbc95477af70bad 284 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 140 3.3E-28 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLI_RS07255 ad8f6211753384b2f0ada115d3b78abd 165 Gene3D G3DSA:1.10.530.10 31 118 1.7E-8 T 23-04-2016 CLI_RS07255 ad8f6211753384b2f0ada115d3b78abd 165 SUPERFAMILY SSF53955 31 119 5.95E-9 T 23-04-2016 IPR023346 Lysozyme-like domain CLI_RS04030 e572a30b7e538de3bb9d819d3a6251ad 146 SUPERFAMILY SSF48695 4 142 5.02E-14 T 23-04-2016 IPR011031 Multihaem cytochrome CLI_RS04030 e572a30b7e538de3bb9d819d3a6251ad 146 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 22 140 3.9E-29 T 23-04-2016 IPR010181 CGCAxxGCC motif CLI_RS04030 e572a30b7e538de3bb9d819d3a6251ad 146 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 22 141 1.1E-35 T 23-04-2016 IPR010181 CGCAxxGCC motif CLI_RS01910 765ac3dbdc58e71296fe3ae3e1ea528b 288 PANTHER PTHR11807 25 278 4.2E-84 T 23-04-2016 CLI_RS01910 765ac3dbdc58e71296fe3ae3e1ea528b 288 SUPERFAMILY SSF52402 31 232 1.01E-45 T 23-04-2016 CLI_RS01910 765ac3dbdc58e71296fe3ae3e1ea528b 288 PANTHER PTHR11807:SF16 25 278 4.2E-84 T 23-04-2016 CLI_RS01910 765ac3dbdc58e71296fe3ae3e1ea528b 288 Gene3D G3DSA:3.40.50.620 37 214 2.7E-19 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS01910 765ac3dbdc58e71296fe3ae3e1ea528b 288 Pfam PF01171 PP-loop family 55 218 2.3E-17 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CLI_RS01910 765ac3dbdc58e71296fe3ae3e1ea528b 288 PIRSF PIRSF004976 9 287 3.8E-69 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CLI_RS08805 cc1b7fd83663f62e8481731a08c2322b 352 Gene3D G3DSA:3.30.200.20 5 108 1.0E-26 T 23-04-2016 CLI_RS08805 cc1b7fd83663f62e8481731a08c2322b 352 PANTHER PTHR39179 3 350 6.2E-66 T 23-04-2016 CLI_RS08805 cc1b7fd83663f62e8481731a08c2322b 352 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 32 343 8.1E-94 T 23-04-2016 IPR014255 Spore coat protein CotS CLI_RS08805 cc1b7fd83663f62e8481731a08c2322b 352 PANTHER PTHR39179:SF1 3 350 6.2E-66 T 23-04-2016 CLI_RS08805 cc1b7fd83663f62e8481731a08c2322b 352 SUPERFAMILY SSF56112 20 347 4.59E-44 T 23-04-2016 IPR011009 Protein kinase-like domain CLI_RS08805 cc1b7fd83663f62e8481731a08c2322b 352 Gene3D G3DSA:3.90.1200.10 109 341 1.0E-57 T 23-04-2016 CLI_RS10240 233f675b78ebb3564f14e3b9134d2fbb 238 SUPERFAMILY SSF53474 10 230 6.74E-23 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS10240 233f675b78ebb3564f14e3b9134d2fbb 238 Gene3D G3DSA:3.40.50.1820 9 230 1.2E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS08615 5bb8e1f0c45bba768c5ac9e5c23f87f7 177 PANTHER PTHR40032 1 177 2.3E-63 T 23-04-2016 CLI_RS08615 5bb8e1f0c45bba768c5ac9e5c23f87f7 177 Pfam PF12671 Putative amidase domain 11 171 1.4E-32 T 23-04-2016 IPR024301 Putative amidase domain CLI_RS08615 5bb8e1f0c45bba768c5ac9e5c23f87f7 177 PANTHER PTHR40032:SF2 1 177 2.3E-63 T 23-04-2016 CLI_RS08615 5bb8e1f0c45bba768c5ac9e5c23f87f7 177 Gene3D G3DSA:3.90.1720.10 107 140 3.9E-4 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS08615 5bb8e1f0c45bba768c5ac9e5c23f87f7 177 Gene3D G3DSA:3.90.1720.10 39 68 3.9E-4 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CLI_RS15150 afce1b5b77d3817b83e3ac2456064921 70 SUPERFAMILY SSF47413 7 64 1.41E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS15150 afce1b5b77d3817b83e3ac2456064921 70 Gene3D G3DSA:1.10.260.40 7 65 3.2E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS15150 afce1b5b77d3817b83e3ac2456064921 70 SMART SM00530 5 61 4.3E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS15150 afce1b5b77d3817b83e3ac2456064921 70 Pfam PF12844 Helix-turn-helix domain 7 65 1.1E-9 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS14905 0183302d0c929e435c1fb4023f18b68d 87 PANTHER PTHR33404 1 87 6.3E-24 T 23-04-2016 CLI_RS14905 0183302d0c929e435c1fb4023f18b68d 87 SUPERFAMILY SSF55229 28 85 1.02E-11 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 CLI_RS14905 0183302d0c929e435c1fb4023f18b68d 87 Gene3D G3DSA:3.30.1070.10 28 86 5.8E-19 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 CLI_RS14905 0183302d0c929e435c1fb4023f18b68d 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 2.1E-25 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 CLI_RS14905 0183302d0c929e435c1fb4023f18b68d 87 Pfam PF03776 Septum formation topological specificity factor MinE 12 82 2.1E-24 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 CLI_RS14905 0183302d0c929e435c1fb4023f18b68d 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 16.468 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 CLI_RS16910 0b2e7bbdf250697e56728992a7c4c091 296 PIRSF PIRSF006816 1 263 4.9E-68 T 23-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 CLI_RS16910 0b2e7bbdf250697e56728992a7c4c091 296 SUPERFAMILY SSF63380 1 91 1.51E-20 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLI_RS16910 0b2e7bbdf250697e56728992a7c4c091 296 PANTHER PTHR11938 54 268 1.3E-70 T 23-04-2016 CLI_RS16910 0b2e7bbdf250697e56728992a7c4c091 296 SUPERFAMILY SSF52343 104 256 1.31E-33 T 23-04-2016 CLI_RS16910 0b2e7bbdf250697e56728992a7c4c091 296 Gene3D G3DSA:3.40.50.80 104 218 4.2E-37 T 23-04-2016 CLI_RS16910 0b2e7bbdf250697e56728992a7c4c091 296 PANTHER PTHR11938:SF47 54 268 1.3E-70 T 23-04-2016 CLI_RS16910 0b2e7bbdf250697e56728992a7c4c091 296 Gene3D G3DSA:2.10.240.10 226 256 8.1E-5 T 23-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 CLI_RS16910 0b2e7bbdf250697e56728992a7c4c091 296 Pfam PF00175 Oxidoreductase NAD-binding domain 110 204 3.0E-6 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CLI_RS16910 0b2e7bbdf250697e56728992a7c4c091 296 Gene3D G3DSA:2.40.30.10 1 91 2.1E-28 T 23-04-2016 CLI_RS16910 0b2e7bbdf250697e56728992a7c4c091 296 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 221 256 8.2E-13 T 23-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 CLI_RS14485 5d890852ad446dd731a58ff0e7ee4922 165 Gene3D G3DSA:3.30.450.40 10 157 2.1E-44 T 23-04-2016 IPR029016 GAF domain-like CLI_RS14485 5d890852ad446dd731a58ff0e7ee4922 165 SUPERFAMILY SSF55781 6 161 1.96E-39 T 23-04-2016 IPR029016 GAF domain-like CLI_RS14485 5d890852ad446dd731a58ff0e7ee4922 165 PANTHER PTHR21021 12 163 8.3E-51 T 23-04-2016 CLI_RS14485 5d890852ad446dd731a58ff0e7ee4922 165 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 99 116 - T 23-04-2016 IPR000614 Free Met sulfoxide reductase conserved site CLI_RS16255 ddeb5f2cf28c358f55f2811e5d12d139 365 PANTHER PTHR32329:SF2 1 365 6.2E-208 T 23-04-2016 CLI_RS16255 ddeb5f2cf28c358f55f2811e5d12d139 365 PANTHER PTHR32329 1 365 6.2E-208 T 23-04-2016 CLI_RS03820 ec31c05f68c3a89eb615d18a53f1d31b 243 SMART SM00382 28 205 1.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS03820 ec31c05f68c3a89eb615d18a53f1d31b 243 SUPERFAMILY SSF52540 3 216 3.07E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03820 ec31c05f68c3a89eb615d18a53f1d31b 243 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS03820 ec31c05f68c3a89eb615d18a53f1d31b 243 Gene3D G3DSA:3.40.50.300 3 216 9.3E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03820 ec31c05f68c3a89eb615d18a53f1d31b 243 Pfam PF00005 ABC transporter 19 157 1.0E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS03820 ec31c05f68c3a89eb615d18a53f1d31b 243 PANTHER PTHR24220 5 215 1.3E-104 T 23-04-2016 CLI_RS03820 ec31c05f68c3a89eb615d18a53f1d31b 243 PANTHER PTHR24220:SF414 5 215 1.3E-104 T 23-04-2016 CLI_RS07595 366a051704171482e4e53ff95b68b7bb 442 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 430 7.7E-91 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CLI_RS07595 366a051704171482e4e53ff95b68b7bb 442 PIRSF PIRSF000505 3 437 3.1E-107 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS07595 366a051704171482e4e53ff95b68b7bb 442 PANTHER PTHR21090:SF5 10 430 4.4E-154 T 23-04-2016 CLI_RS07595 366a051704171482e4e53ff95b68b7bb 442 SUPERFAMILY SSF55205 10 432 4.74E-98 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CLI_RS07595 366a051704171482e4e53ff95b68b7bb 442 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 441 28.734 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS07595 366a051704171482e4e53ff95b68b7bb 442 Gene3D G3DSA:3.65.10.10 22 239 2.5E-48 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CLI_RS07595 366a051704171482e4e53ff95b68b7bb 442 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 430 1.7E-103 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS07595 366a051704171482e4e53ff95b68b7bb 442 Gene3D G3DSA:3.65.10.10 240 434 2.5E-41 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CLI_RS07595 366a051704171482e4e53ff95b68b7bb 442 PANTHER PTHR21090 10 430 4.4E-154 T 23-04-2016 CLI_RS07595 366a051704171482e4e53ff95b68b7bb 442 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CLI_RS08750 760341695b03080a2074ef9b9d562477 201 Gene3D G3DSA:1.10.10.10 7 70 1.3E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08750 760341695b03080a2074ef9b9d562477 201 PANTHER PTHR33516 2 201 4.9E-95 T 23-04-2016 CLI_RS08750 760341695b03080a2074ef9b9d562477 201 Pfam PF00717 Peptidase S24-like 120 185 1.0E-15 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B CLI_RS08750 760341695b03080a2074ef9b9d562477 201 Hamap MF_00015 LexA repressor [lexA]. 4 201 33.639 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CLI_RS08750 760341695b03080a2074ef9b9d562477 201 TIGRFAM TIGR00498 lexA: repressor LexA 7 200 2.3E-71 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CLI_RS08750 760341695b03080a2074ef9b9d562477 201 Gene3D G3DSA:2.10.109.10 80 201 1.6E-42 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CLI_RS08750 760341695b03080a2074ef9b9d562477 201 SUPERFAMILY SSF51306 79 199 6.98E-36 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CLI_RS08750 760341695b03080a2074ef9b9d562477 201 PANTHER PTHR33516:SF2 2 201 4.9E-95 T 23-04-2016 CLI_RS08750 760341695b03080a2074ef9b9d562477 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 127 1.2E-10 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLI_RS08750 760341695b03080a2074ef9b9d562477 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 139 1.2E-10 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLI_RS08750 760341695b03080a2074ef9b9d562477 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 168 1.2E-10 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLI_RS08750 760341695b03080a2074ef9b9d562477 201 SUPERFAMILY SSF46785 7 71 6.62E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08750 760341695b03080a2074ef9b9d562477 201 Pfam PF01726 LexA DNA binding domain 7 66 3.1E-21 T 23-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 Gene3D G3DSA:2.160.10.10 324 451 1.2E-35 T 23-04-2016 CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 Gene3D G3DSA:3.90.550.10 3 244 2.6E-75 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 PANTHER PTHR22572:SF115 5 448 5.6E-224 T 23-04-2016 CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 SUPERFAMILY SSF51161 256 445 3.81E-47 T 23-04-2016 IPR011004 Trimeric LpxA-like CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 Pfam PF00483 Nucleotidyl transferase 5 215 1.6E-24 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 317 351 2.3E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 299 1.5E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 394 428 4.2E-8 T 23-04-2016 IPR001451 Hexapeptide repeat CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 SUPERFAMILY SSF53448 2 253 5.63E-65 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 451 39.895 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 Gene3D G3DSA:2.160.10.10 245 323 9.2E-20 T 23-04-2016 CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 452 2.3E-171 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 CLI_RS18265 da3c99639795d33bf1c0fa351c30730e 457 PANTHER PTHR22572 5 448 5.6E-224 T 23-04-2016 CLI_RS16420 7742fd103b7846b0d6e1cbee3049688c 241 Pfam PF02517 CAAX protease self-immunity 142 231 1.8E-14 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 CLI_RS10320 9f61d978ad787a498eb020b0b031ed76 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 56 3.6E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLI_RS10320 9f61d978ad787a498eb020b0b031ed76 189 SUPERFAMILY SSF46689 4 68 5.82E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CLI_RS10320 9f61d978ad787a498eb020b0b031ed76 189 PANTHER PTHR30055:SF55 4 178 5.7E-64 T 23-04-2016 CLI_RS10320 9f61d978ad787a498eb020b0b031ed76 189 PANTHER PTHR30055 4 178 5.7E-64 T 23-04-2016 CLI_RS10320 9f61d978ad787a498eb020b0b031ed76 189 Gene3D G3DSA:1.10.357.10 6 169 4.0E-16 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLI_RS03435 70045b6037e913566554d7a243b5675d 162 SUPERFAMILY SSF47240 6 153 1.13E-25 T 23-04-2016 IPR009078 Ferritin-like superfamily CLI_RS03435 70045b6037e913566554d7a243b5675d 162 Gene3D G3DSA:1.20.1260.10 5 150 3.5E-33 T 23-04-2016 IPR012347 Ferritin-related CLI_RS03435 70045b6037e913566554d7a243b5675d 162 PANTHER PTHR33531:SF3 9 162 3.6E-38 T 23-04-2016 CLI_RS03435 70045b6037e913566554d7a243b5675d 162 Pfam PF02915 Rubrerythrin 9 146 4.0E-17 T 23-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLI_RS03435 70045b6037e913566554d7a243b5675d 162 PANTHER PTHR33531 9 162 3.6E-38 T 23-04-2016 CLI_RS01955 a7644f0768c94706b18ac1144e4ea360 175 PANTHER PTHR14969 1 174 7.7E-37 T 23-04-2016 CLI_RS01955 a7644f0768c94706b18ac1144e4ea360 175 Gene3D G3DSA:1.20.144.10 4 173 2.6E-42 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS01955 a7644f0768c94706b18ac1144e4ea360 175 SUPERFAMILY SSF48317 4 172 1.57E-43 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS01955 a7644f0768c94706b18ac1144e4ea360 175 SMART SM00014 57 167 2.1E-26 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS01955 a7644f0768c94706b18ac1144e4ea360 175 Pfam PF01569 PAP2 superfamily 61 173 3.2E-27 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS13030 2a19b35c2e6f4b351b1b78e5d96f7449 279 Pfam PF02811 PHP domain 7 111 2.0E-9 T 23-04-2016 IPR004013 PHP domain GO:0003824 CLI_RS13030 2a19b35c2e6f4b351b1b78e5d96f7449 279 SUPERFAMILY SSF89550 167 253 8.5E-45 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CLI_RS13030 2a19b35c2e6f4b351b1b78e5d96f7449 279 SUPERFAMILY SSF89550 3 83 8.5E-45 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CLI_RS13030 2a19b35c2e6f4b351b1b78e5d96f7449 279 PANTHER PTHR30007 2 247 2.8E-63 T 23-04-2016 CLI_RS13030 2a19b35c2e6f4b351b1b78e5d96f7449 279 PANTHER PTHR30007:SF4 2 247 2.8E-63 T 23-04-2016 CLI_RS13030 2a19b35c2e6f4b351b1b78e5d96f7449 279 SMART SM00481 5 70 7.9E-15 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLI_RS13030 2a19b35c2e6f4b351b1b78e5d96f7449 279 Gene3D G3DSA:3.20.20.140 3 87 3.6E-38 T 23-04-2016 CLI_RS13030 2a19b35c2e6f4b351b1b78e5d96f7449 279 Gene3D G3DSA:3.20.20.140 159 267 3.6E-38 T 23-04-2016 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 282 33.005 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 3.1E-56 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 3.1E-56 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 3.1E-56 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 3.1E-56 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 3.1E-56 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 3.1E-56 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 3.1E-56 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 Gene3D G3DSA:3.40.192.10 7 138 1.0E-33 T 23-04-2016 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 122 281 1.5E-61 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 PANTHER PTHR10025 1 280 1.6E-104 T 23-04-2016 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 Gene3D G3DSA:3.40.50.720 139 263 4.4E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 119 1.3E-29 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 SUPERFAMILY SSF53223 1 119 7.0E-27 T 23-04-2016 CLI_RS06085 d085b3b2f46df14ffade28e0a3970624 282 SUPERFAMILY SSF51735 121 281 8.82E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS10015 f773efbd8557b73ec89e6b6ee424f569 369 PANTHER PTHR34975 1 367 1.8E-162 T 23-04-2016 CLI_RS10015 f773efbd8557b73ec89e6b6ee424f569 369 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 360 4.4E-76 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS10015 f773efbd8557b73ec89e6b6ee424f569 369 Pfam PF03845 Spore germination protein 9 324 1.9E-69 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS10015 f773efbd8557b73ec89e6b6ee424f569 369 PANTHER PTHR34975:SF2 1 367 1.8E-162 T 23-04-2016 CLI_RS08525 4f26baf192e4449472068cd590c396b3 183 Gene3D G3DSA:2.30.30.330 9 159 1.2E-5 T 23-04-2016 CLI_RS08525 4f26baf192e4449472068cd590c396b3 183 SUPERFAMILY SSF54001 9 169 1.08E-6 T 23-04-2016 CLI_RS01415 d62a758f2f4d8c783e014f7dddba8a4f 254 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS01415 d62a758f2f4d8c783e014f7dddba8a4f 254 PANTHER PTHR24220:SF594 6 246 3.4E-109 T 23-04-2016 CLI_RS01415 d62a758f2f4d8c783e014f7dddba8a4f 254 Pfam PF00005 ABC transporter 24 172 1.5E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS01415 d62a758f2f4d8c783e014f7dddba8a4f 254 Gene3D G3DSA:3.40.50.300 2 223 6.4E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01415 d62a758f2f4d8c783e014f7dddba8a4f 254 SMART SM00382 33 221 2.5E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS01415 d62a758f2f4d8c783e014f7dddba8a4f 254 PANTHER PTHR24220 6 246 3.4E-109 T 23-04-2016 CLI_RS01415 d62a758f2f4d8c783e014f7dddba8a4f 254 SUPERFAMILY SSF52540 4 224 2.13E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13055 ba510934a2b8418d6b417d4236ec49a1 62 Gene3D G3DSA:1.10.287.540 1 54 3.2E-24 T 23-04-2016 IPR023218 UPF0291 structural domain CLI_RS13055 ba510934a2b8418d6b417d4236ec49a1 62 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 53 6.9E-19 T 23-04-2016 IPR009242 Protein of unknown function DUF896 CLI_RS13055 ba510934a2b8418d6b417d4236ec49a1 62 PANTHER PTHR37300 2 62 2.5E-24 T 23-04-2016 CLI_RS13055 ba510934a2b8418d6b417d4236ec49a1 62 SUPERFAMILY SSF158221 1 42 5.89E-15 T 23-04-2016 CLI_RS13055 ba510934a2b8418d6b417d4236ec49a1 62 Hamap MF_01103 UPF0291 protein . 1 60 14.546 T 23-04-2016 IPR009242 Protein of unknown function DUF896 CLI_RS00700 712be5c7dc6a32d9d21b2fada53ab556 375 PANTHER PTHR12526 1 372 1.5E-109 T 23-04-2016 CLI_RS00700 712be5c7dc6a32d9d21b2fada53ab556 375 Gene3D G3DSA:3.40.50.2000 155 349 4.4E-28 T 23-04-2016 CLI_RS00700 712be5c7dc6a32d9d21b2fada53ab556 375 Pfam PF13439 Glycosyltransferase Family 4 17 168 3.9E-10 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLI_RS00700 712be5c7dc6a32d9d21b2fada53ab556 375 PANTHER PTHR12526:SF399 1 372 1.5E-109 T 23-04-2016 CLI_RS00700 712be5c7dc6a32d9d21b2fada53ab556 375 Pfam PF00534 Glycosyl transferases group 1 194 349 2.3E-37 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CLI_RS00700 712be5c7dc6a32d9d21b2fada53ab556 375 SUPERFAMILY SSF53756 9 372 2.93E-79 T 23-04-2016 CLI_RS11920 0a707301d475b5181382a1148a18226f 283 Pfam PF10543 ORF6N domain 20 103 8.5E-20 T 23-04-2016 IPR018873 KilA-N, DNA-binding domain CLI_RS02965 fa61f76412fced796f82427d53517ed8 302 Gene3D G3DSA:3.40.50.1820 56 301 1.1E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS02965 fa61f76412fced796f82427d53517ed8 302 SUPERFAMILY SSF53474 53 299 4.05E-42 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS02965 fa61f76412fced796f82427d53517ed8 302 PANTHER PTHR12277 51 300 1.2E-46 T 23-04-2016 CLI_RS02965 fa61f76412fced796f82427d53517ed8 302 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 93 189 2.2E-8 T 23-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 CLI_RS16015 c2c37806b6e998375079883494c476ab 181 Gene3D G3DSA:1.10.443.10 12 175 2.9E-31 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS16015 c2c37806b6e998375079883494c476ab 181 Pfam PF00589 Phage integrase family 12 165 5.0E-22 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS16015 c2c37806b6e998375079883494c476ab 181 PANTHER PTHR30349:SF19 1 181 1.7E-51 T 23-04-2016 CLI_RS16015 c2c37806b6e998375079883494c476ab 181 PANTHER PTHR30349 1 181 1.7E-51 T 23-04-2016 CLI_RS16015 c2c37806b6e998375079883494c476ab 181 SUPERFAMILY SSF56349 13 178 5.3E-33 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLI_RS05025 e134eec8c0447fa643266dac7ad89628 255 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 250 2.5E-65 T 23-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CLI_RS05025 e134eec8c0447fa643266dac7ad89628 255 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 2 252 4.7E-56 T 23-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CLI_RS05025 e134eec8c0447fa643266dac7ad89628 255 PANTHER PTHR36925 1 255 2.6E-87 T 23-04-2016 CLI_RS13550 12ab60a35b2c60531153c13ee63b92be 228 Gene3D G3DSA:3.40.50.150 22 227 9.5E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS13550 12ab60a35b2c60531153c13ee63b92be 228 Pfam PF13649 Methyltransferase domain 47 141 2.6E-20 T 23-04-2016 CLI_RS13550 12ab60a35b2c60531153c13ee63b92be 228 PANTHER PTHR10108 13 155 9.8E-20 T 23-04-2016 CLI_RS13550 12ab60a35b2c60531153c13ee63b92be 228 SUPERFAMILY SSF53335 18 213 1.06E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 SUPERFAMILY SSF50249 6 115 4.18E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 SMART SM00316 196 266 1.5E-27 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 SMART SM00316 22 93 6.6E-9 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 SMART SM00316 109 177 7.6E-6 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 SMART SM00316 281 352 3.4E-27 T 23-04-2016 IPR022967 RNA-binding domain, S1 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 Gene3D G3DSA:2.40.50.140 102 177 2.6E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 Pfam PF00575 S1 RNA binding domain 110 175 1.1E-5 T 23-04-2016 IPR003029 S1 domain GO:0003676 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 Pfam PF00575 S1 RNA binding domain 195 266 1.5E-23 T 23-04-2016 IPR003029 S1 domain GO:0003676 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 Pfam PF00575 S1 RNA binding domain 280 352 1.6E-22 T 23-04-2016 IPR003029 S1 domain GO:0003676 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 Pfam PF00575 S1 RNA binding domain 22 93 1.4E-6 T 23-04-2016 IPR003029 S1 domain GO:0003676 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 SUPERFAMILY SSF50249 110 191 1.27E-10 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 PRINTS PR00681 Ribosomal protein S1 signature 296 315 6.5E-51 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 PRINTS PR00681 Ribosomal protein S1 signature 218 239 6.5E-51 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 PRINTS PR00681 Ribosomal protein S1 signature 24 42 6.5E-51 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 PRINTS PR00681 Ribosomal protein S1 signature 132 149 6.5E-51 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 PRINTS PR00681 Ribosomal protein S1 signature 42 56 6.5E-51 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 PRINTS PR00681 Ribosomal protein S1 signature 335 353 6.5E-51 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 PRINTS PR00681 Ribosomal protein S1 signature 90 109 6.5E-51 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 PRINTS PR00681 Ribosomal protein S1 signature 161 181 6.5E-51 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 PRINTS PR00681 Ribosomal protein S1 signature 114 130 6.5E-51 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 PANTHER PTHR10724:SF6 5 362 7.5E-96 T 23-04-2016 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 Gene3D G3DSA:2.40.50.140 278 356 1.9E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 Gene3D G3DSA:2.40.50.140 9 95 2.7E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 PANTHER PTHR10724 5 362 7.5E-96 T 23-04-2016 CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 SUPERFAMILY SSF50249 195 283 1.36E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 Gene3D G3DSA:2.40.50.140 198 277 1.3E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS06020 dfed0797b542308e3952371ca35b3e25 387 SUPERFAMILY SSF50249 269 355 2.67E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 SUPERFAMILY SSF50249 2 124 3.0E-52 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.2E-68 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 Pfam PF00164 Ribosomal protein S12/S23 8 123 1.9E-42 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 Gene3D G3DSA:2.40.50.140 1 124 1.1E-64 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.132 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 PANTHER PTHR11652 1 116 2.2E-72 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 PIRSF PIRSF002133 1 124 8.9E-54 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 4.9E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 4.9E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 4.9E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 4.9E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 4.9E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CLI_RS17865 9d7bdd35aae46b5a1046bec9f30f1289 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 4.9E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CLI_RS14420 14a950559b95081b304449afe4b1f8b1 322 Gene3D G3DSA:1.10.3470.10 8 319 6.0E-95 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS14420 14a950559b95081b304449afe4b1f8b1 322 SUPERFAMILY SSF81345 7 315 1.2E-75 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS14420 14a950559b95081b304449afe4b1f8b1 322 Pfam PF01032 FecCD transport family 14 315 4.9E-86 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS14420 14a950559b95081b304449afe4b1f8b1 322 PANTHER PTHR30472 1 322 1.7E-229 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS14420 14a950559b95081b304449afe4b1f8b1 322 PANTHER PTHR30472:SF28 1 322 1.7E-229 T 23-04-2016 CLI_RS08845 f7156e56046a6237f838b2212dc12cbc 429 Pfam PF09861 Domain of unknown function (DUF2088) 8 204 1.1E-76 T 23-04-2016 IPR018657 Domain of unknown function DUF2088 CLI_RS08845 f7156e56046a6237f838b2212dc12cbc 429 PANTHER PTHR33171:SF3 1 428 2.1E-125 T 23-04-2016 CLI_RS08845 f7156e56046a6237f838b2212dc12cbc 429 PANTHER PTHR33171 1 428 2.1E-125 T 23-04-2016 CLI_RS00405 9798b301f1037c9f017869b29c38a8bb 231 PANTHER PTHR10344 1 226 1.9E-41 T 23-04-2016 CLI_RS00405 9798b301f1037c9f017869b29c38a8bb 231 Pfam PF02223 Thymidylate kinase 9 190 1.1E-17 T 23-04-2016 CLI_RS00405 9798b301f1037c9f017869b29c38a8bb 231 Gene3D G3DSA:3.40.50.300 1 226 4.0E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00405 9798b301f1037c9f017869b29c38a8bb 231 SUPERFAMILY SSF52540 1 228 1.98E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00405 9798b301f1037c9f017869b29c38a8bb 231 Hamap MF_00165 Thymidylate kinase [tmk]. 5 225 12.831 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CLI_RS15230 be902fc04c9e5ca8bd7ef9d8c3390155 199 SMART SM00849 12 183 3.4E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS15230 be902fc04c9e5ca8bd7ef9d8c3390155 199 PANTHER PTHR11935:SF8 1 199 6.7E-69 T 23-04-2016 CLI_RS15230 be902fc04c9e5ca8bd7ef9d8c3390155 199 PANTHER PTHR11935 1 199 6.7E-69 T 23-04-2016 CLI_RS15230 be902fc04c9e5ca8bd7ef9d8c3390155 199 Pfam PF00753 Metallo-beta-lactamase superfamily 12 183 2.6E-27 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS15230 be902fc04c9e5ca8bd7ef9d8c3390155 199 SUPERFAMILY SSF56281 1 199 6.42E-53 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS15230 be902fc04c9e5ca8bd7ef9d8c3390155 199 Gene3D G3DSA:3.60.15.10 1 199 1.4E-56 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS18345 3e97ab0772c77b8d3e24978817a66223 124 Pfam PF12646 Domain of unknown function (DUF3783) 64 119 1.2E-15 T 23-04-2016 IPR016621 Uncharacterised conserved protein UCP014543 CLI_RS18345 3e97ab0772c77b8d3e24978817a66223 124 PIRSF PIRSF014543 1 124 2.2E-26 T 23-04-2016 IPR016621 Uncharacterised conserved protein UCP014543 CLI_RS00760 944569acbdba44125a0781f14d370793 365 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 360 2.1E-66 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS00760 944569acbdba44125a0781f14d370793 365 Pfam PF03845 Spore germination protein 9 327 9.8E-55 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS00760 944569acbdba44125a0781f14d370793 365 PANTHER PTHR34975:SF2 1 365 2.4E-134 T 23-04-2016 CLI_RS00760 944569acbdba44125a0781f14d370793 365 SUPERFAMILY SSF81343 38 130 3.33E-6 T 23-04-2016 CLI_RS00760 944569acbdba44125a0781f14d370793 365 PANTHER PTHR34975 1 365 2.4E-134 T 23-04-2016 CLI_RS01135 985d937d01018e3fc1d7d7b83bffec58 94 Pfam PF14276 Domain of unknown function (DUF4363) 2 93 1.8E-26 T 23-04-2016 IPR025373 Protein of unknown function DUF4363 CLI_RS00770 c8b199c99d6c363b152dbcf5caa40880 210 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 3 168 1.4E-66 T 23-04-2016 IPR014202 Sporulation stage II, protein R CLI_RS00770 c8b199c99d6c363b152dbcf5caa40880 210 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 38 163 1.5E-51 T 23-04-2016 IPR014202 Sporulation stage II, protein R CLI_RS00770 c8b199c99d6c363b152dbcf5caa40880 210 PANTHER PTHR22683 1 206 3.8E-107 T 23-04-2016 CLI_RS00770 c8b199c99d6c363b152dbcf5caa40880 210 PANTHER PTHR22683:SF43 1 206 3.8E-107 T 23-04-2016 CLI_RS15975 207f9140daf983a8a8a1e1e709cc2f67 266 Pfam PF00574 Clp protease 62 195 3.1E-27 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLI_RS15975 207f9140daf983a8a8a1e1e709cc2f67 266 Gene3D G3DSA:3.90.226.10 23 200 2.5E-37 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS15975 207f9140daf983a8a8a1e1e709cc2f67 266 PANTHER PTHR10381 58 261 4.3E-42 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLI_RS15975 207f9140daf983a8a8a1e1e709cc2f67 266 SUPERFAMILY SSF52096 23 195 2.88E-37 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS15975 207f9140daf983a8a8a1e1e709cc2f67 266 PRINTS PR00127 Clp protease catalytic subunit P signature 71 91 1.1E-6 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLI_RS15975 207f9140daf983a8a8a1e1e709cc2f67 266 PRINTS PR00127 Clp protease catalytic subunit P signature 102 119 1.1E-6 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLI_RS15975 207f9140daf983a8a8a1e1e709cc2f67 266 PANTHER PTHR10381:SF23 58 261 4.3E-42 T 23-04-2016 CLI_RS14525 2281d356e1698625f7961c4a647bcbff 285 PANTHER PTHR24220 6 284 2.4E-162 T 23-04-2016 CLI_RS14525 2281d356e1698625f7961c4a647bcbff 285 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS14525 2281d356e1698625f7961c4a647bcbff 285 PANTHER PTHR24220:SF499 6 284 2.4E-162 T 23-04-2016 CLI_RS14525 2281d356e1698625f7961c4a647bcbff 285 Pfam PF00005 ABC transporter 19 158 6.0E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS14525 2281d356e1698625f7961c4a647bcbff 285 SMART SM00382 28 207 4.2E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS14525 2281d356e1698625f7961c4a647bcbff 285 SUPERFAMILY SSF52540 2 222 1.74E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14525 2281d356e1698625f7961c4a647bcbff 285 Gene3D G3DSA:3.40.50.300 5 220 2.3E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05860 d7f28d3631fc69c44f290f72423705c5 145 PANTHER PTHR11911:SF6 1 118 6.3E-14 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CLI_RS05860 d7f28d3631fc69c44f290f72423705c5 145 SMART SM00116 12 60 0.0053 T 23-04-2016 IPR000644 CBS domain CLI_RS05860 d7f28d3631fc69c44f290f72423705c5 145 SUPERFAMILY SSF54631 1 130 7.83E-29 T 23-04-2016 CLI_RS05860 d7f28d3631fc69c44f290f72423705c5 145 Pfam PF00571 CBS domain 85 127 9.5E-5 T 23-04-2016 IPR000644 CBS domain CLI_RS05860 d7f28d3631fc69c44f290f72423705c5 145 Pfam PF00571 CBS domain 13 59 4.1E-9 T 23-04-2016 IPR000644 CBS domain CLI_RS05860 d7f28d3631fc69c44f290f72423705c5 145 PANTHER PTHR11911 1 118 6.3E-14 T 23-04-2016 CLI_RS05860 d7f28d3631fc69c44f290f72423705c5 145 Gene3D G3DSA:3.10.580.10 3 130 1.0E-24 T 23-04-2016 CLI_RS04115 0dde59f6d00c77c6377c6bf490af1fe3 275 SUPERFAMILY SSF53613 1 264 5.46E-83 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS04115 0dde59f6d00c77c6377c6bf490af1fe3 275 Gene3D G3DSA:3.40.1190.20 1 256 1.1E-101 T 23-04-2016 IPR029056 Ribokinase-like CLI_RS04115 0dde59f6d00c77c6377c6bf490af1fe3 275 Pfam PF08543 Phosphomethylpyrimidine kinase 11 254 4.7E-96 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 CLI_RS04115 0dde59f6d00c77c6377c6bf490af1fe3 275 PANTHER PTHR20858 1 262 4.8E-129 T 23-04-2016 CLI_RS04115 0dde59f6d00c77c6377c6bf490af1fe3 275 PANTHER PTHR20858:SF17 1 262 4.8E-129 T 23-04-2016 CLI_RS04115 0dde59f6d00c77c6377c6bf490af1fe3 275 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 256 3.4E-106 T 23-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLI_RS13445 25897283f052581b43e36848a608b682 225 PANTHER PTHR30576:SF4 29 225 1.1E-106 T 23-04-2016 CLI_RS13445 25897283f052581b43e36848a608b682 225 Pfam PF02397 Bacterial sugar transferase 31 219 5.2E-57 T 23-04-2016 IPR003362 Bacterial sugar transferase CLI_RS13445 25897283f052581b43e36848a608b682 225 PANTHER PTHR30576 29 225 1.1E-106 T 23-04-2016 CLI_RS13070 12d46d841b28ca0320dd1b83d80d2d94 381 PANTHER PTHR32479:SF12 1 345 1.3E-169 T 23-04-2016 CLI_RS13070 12d46d841b28ca0320dd1b83d80d2d94 381 PANTHER PTHR32479 1 345 1.3E-169 T 23-04-2016 CLI_RS13070 12d46d841b28ca0320dd1b83d80d2d94 381 Pfam PF13183 4Fe-4S dicluster domain 22 78 1.2E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS13070 12d46d841b28ca0320dd1b83d80d2d94 381 SUPERFAMILY SSF46548 7 94 2.27E-13 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS13070 12d46d841b28ca0320dd1b83d80d2d94 381 Gene3D G3DSA:1.10.1060.10 7 98 2.8E-12 T 23-04-2016 CLI_RS13070 12d46d841b28ca0320dd1b83d80d2d94 381 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS13070 12d46d841b28ca0320dd1b83d80d2d94 381 Pfam PF02754 Cysteine-rich domain 137 216 2.7E-7 T 23-04-2016 IPR004017 Cysteine-rich domain CLI_RS13070 12d46d841b28ca0320dd1b83d80d2d94 381 Pfam PF02754 Cysteine-rich domain 254 332 4.8E-8 T 23-04-2016 IPR004017 Cysteine-rich domain CLI_RS06965 65fafd735aafe684b7781b8dc2737682 324 PANTHER PTHR22911:SF23 1 324 5.1E-93 T 23-04-2016 CLI_RS06965 65fafd735aafe684b7781b8dc2737682 324 SUPERFAMILY SSF103481 194 299 2.35E-15 T 23-04-2016 CLI_RS06965 65fafd735aafe684b7781b8dc2737682 324 Pfam PF00892 EamA-like transporter family 10 144 9.3E-17 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CLI_RS06965 65fafd735aafe684b7781b8dc2737682 324 Pfam PF00892 EamA-like transporter family 158 296 1.8E-19 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CLI_RS06965 65fafd735aafe684b7781b8dc2737682 324 PANTHER PTHR22911 1 324 5.1E-93 T 23-04-2016 CLI_RS06965 65fafd735aafe684b7781b8dc2737682 324 SUPERFAMILY SSF103481 52 144 8.5E-12 T 23-04-2016 CLI_RS13085 448c9cc46b7cf376710b8725a9320291 224 Pfam PF00535 Glycosyl transferase family 2 3 120 2.7E-18 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CLI_RS13085 448c9cc46b7cf376710b8725a9320291 224 PANTHER PTHR10859 1 209 1.2E-52 T 23-04-2016 CLI_RS13085 448c9cc46b7cf376710b8725a9320291 224 TIGRFAM TIGR04283 glyco_like_mftF: transferase 2, rSAM/selenodomain-associated 2 220 3.5E-73 T 23-04-2016 IPR026461 Transferase 2, rSAM/selenodomain-associated CLI_RS13085 448c9cc46b7cf376710b8725a9320291 224 SUPERFAMILY SSF53448 1 193 3.78E-31 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS13085 448c9cc46b7cf376710b8725a9320291 224 PANTHER PTHR10859:SF92 1 209 1.2E-52 T 23-04-2016 CLI_RS13085 448c9cc46b7cf376710b8725a9320291 224 Gene3D G3DSA:3.90.550.10 2 185 7.0E-24 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS06735 f21fa4b697ced1058611f806e4d9c889 364 Gene3D G3DSA:3.20.20.80 186 345 6.9E-4 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLI_RS06735 f21fa4b697ced1058611f806e4d9c889 364 PANTHER PTHR33202:SF4 74 364 1.4E-180 T 23-04-2016 CLI_RS06735 f21fa4b697ced1058611f806e4d9c889 364 SUPERFAMILY SSF51445 53 348 4.5E-19 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CLI_RS06735 f21fa4b697ced1058611f806e4d9c889 364 PANTHER PTHR33202 74 364 1.4E-180 T 23-04-2016 CLI_RS03250 5475143d9b4763c7b2758bf60e881bf4 130 PANTHER PTHR10245:SF47 1 126 9.7E-18 T 23-04-2016 CLI_RS03250 5475143d9b4763c7b2758bf60e881bf4 130 Pfam PF01381 Helix-turn-helix 7 61 1.1E-16 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS03250 5475143d9b4763c7b2758bf60e881bf4 130 Gene3D G3DSA:1.10.260.40 1 62 3.8E-24 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS03250 5475143d9b4763c7b2758bf60e881bf4 130 PANTHER PTHR10245 1 126 9.7E-18 T 23-04-2016 CLI_RS03250 5475143d9b4763c7b2758bf60e881bf4 130 SUPERFAMILY SSF47413 1 65 1.13E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS03250 5475143d9b4763c7b2758bf60e881bf4 130 SMART SM00530 6 61 6.9E-16 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS11925 83e4d25b25827315a3cb5279dd33ac41 67 Gene3D G3DSA:1.10.260.40 2 66 1.7E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS11925 83e4d25b25827315a3cb5279dd33ac41 67 SUPERFAMILY SSF47413 2 65 1.1E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS11925 83e4d25b25827315a3cb5279dd33ac41 67 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 3 59 2.3E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS11925 83e4d25b25827315a3cb5279dd33ac41 67 SMART SM00530 3 58 1.2E-10 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS07140 2753809a633a3be53590cf942c4e4be9 208 SMART SM00382 34 206 5.1E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS07140 2753809a633a3be53590cf942c4e4be9 208 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS07140 2753809a633a3be53590cf942c4e4be9 208 PANTHER PTHR24220:SF444 11 204 1.2E-110 T 23-04-2016 CLI_RS07140 2753809a633a3be53590cf942c4e4be9 208 PANTHER PTHR24220 11 204 1.2E-110 T 23-04-2016 CLI_RS07140 2753809a633a3be53590cf942c4e4be9 208 SUPERFAMILY SSF52540 11 204 5.44E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07140 2753809a633a3be53590cf942c4e4be9 208 Pfam PF00005 ABC transporter 25 156 2.0E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS07140 2753809a633a3be53590cf942c4e4be9 208 Gene3D G3DSA:3.40.50.300 11 204 1.0E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14755 94fc2360c8aa93366d12b83af103d743 363 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 171 362 9.2E-73 T 23-04-2016 IPR010897 Sporulation stage II, protein P CLI_RS14755 94fc2360c8aa93366d12b83af103d743 363 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 93 358 6.9E-82 T 23-04-2016 IPR010897 Sporulation stage II, protein P CLI_RS14135 ced3795158d37ed3939b280b16b63111 464 Pfam PF01554 MatE 26 187 4.9E-29 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS14135 ced3795158d37ed3939b280b16b63111 464 Pfam PF01554 MatE 248 409 7.7E-25 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS14135 ced3795158d37ed3939b280b16b63111 464 PANTHER PTHR11206 9 460 4.4E-174 T 23-04-2016 CLI_RS14135 ced3795158d37ed3939b280b16b63111 464 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 416 2.4E-69 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS14135 ced3795158d37ed3939b280b16b63111 464 PANTHER PTHR11206:SF132 9 460 4.4E-174 T 23-04-2016 CLI_RS14135 ced3795158d37ed3939b280b16b63111 464 PIRSF PIRSF006603 1 457 1.3E-103 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS02120 2b839dd8ac583b66237c9e5458d18ee9 1128 PANTHER PTHR30032 33 336 7.7E-37 T 23-04-2016 CLI_RS02120 2b839dd8ac583b66237c9e5458d18ee9 1128 Pfam PF01841 Transglutaminase-like superfamily 872 979 7.4E-13 T 23-04-2016 IPR002931 Transglutaminase-like CLI_RS02120 2b839dd8ac583b66237c9e5458d18ee9 1128 SMART SM00460 920 981 2.3E-7 T 23-04-2016 IPR002931 Transglutaminase-like CLI_RS02120 2b839dd8ac583b66237c9e5458d18ee9 1128 SUPERFAMILY SSF54001 1029 1069 2.14E-26 T 23-04-2016 CLI_RS02120 2b839dd8ac583b66237c9e5458d18ee9 1128 SUPERFAMILY SSF54001 842 997 2.14E-26 T 23-04-2016 CLI_RS02120 2b839dd8ac583b66237c9e5458d18ee9 1128 Pfam PF04122 Putative cell wall binding repeat 2 36 122 8.6E-20 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02120 2b839dd8ac583b66237c9e5458d18ee9 1128 Pfam PF04122 Putative cell wall binding repeat 2 234 325 6.7E-15 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02120 2b839dd8ac583b66237c9e5458d18ee9 1128 Pfam PF04122 Putative cell wall binding repeat 2 135 222 1.9E-14 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02120 2b839dd8ac583b66237c9e5458d18ee9 1128 PANTHER PTHR30032:SF1 33 336 7.7E-37 T 23-04-2016 CLI_RS08070 b3bafce0745913830241f4650de9b5fa 242 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 232 3.1E-86 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 CLI_RS08070 b3bafce0745913830241f4650de9b5fa 242 Gene3D G3DSA:3.20.20.70 1 236 1.1E-80 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS08070 b3bafce0745913830241f4650de9b5fa 242 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 235 36.295 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 CLI_RS08070 b3bafce0745913830241f4650de9b5fa 242 SUPERFAMILY SSF51366 1 236 1.61E-71 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLI_RS08070 b3bafce0745913830241f4650de9b5fa 242 PANTHER PTHR21235 1 240 9.2E-105 T 23-04-2016 CLI_RS08070 b3bafce0745913830241f4650de9b5fa 242 Pfam PF00977 Histidine biosynthesis protein 3 227 1.6E-75 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 CLI_RS08070 b3bafce0745913830241f4650de9b5fa 242 PANTHER PTHR21235:SF15 1 240 9.2E-105 T 23-04-2016 CLI_RS06705 8b43ecc3c81012876c188c786f0894f1 554 PANTHER PTHR11203 1 554 1.9E-251 T 23-04-2016 CLI_RS06705 8b43ecc3c81012876c188c786f0894f1 554 SUPERFAMILY SSF56281 8 423 5.2E-96 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS06705 8b43ecc3c81012876c188c786f0894f1 554 Gene3D G3DSA:3.60.15.10 3 254 1.4E-80 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS06705 8b43ecc3c81012876c188c786f0894f1 554 PIRSF PIRSF004803 1 554 4.5E-237 T 23-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CLI_RS06705 8b43ecc3c81012876c188c786f0894f1 554 PANTHER PTHR11203:SF22 1 554 1.9E-251 T 23-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CLI_RS06705 8b43ecc3c81012876c188c786f0894f1 554 Pfam PF00753 Metallo-beta-lactamase superfamily 17 163 2.1E-11 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS06705 8b43ecc3c81012876c188c786f0894f1 554 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 7 552 1.2E-198 T 23-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CLI_RS06705 8b43ecc3c81012876c188c786f0894f1 554 SMART SM00849 19 214 2.9E-25 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS06705 8b43ecc3c81012876c188c786f0894f1 554 Hamap MF_01491 Ribonuclease J [rnj]. 2 554 47.635 T 23-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CLI_RS06705 8b43ecc3c81012876c188c786f0894f1 554 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 352 406 3.8E-9 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CLI_RS15705 2c339c65864113499aa645e348069fa2 319 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS15705 2c339c65864113499aa645e348069fa2 319 SMART SM00382 36 228 9.1E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS15705 2c339c65864113499aa645e348069fa2 319 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 229 317 2.0E-29 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLI_RS15705 2c339c65864113499aa645e348069fa2 319 SUPERFAMILY SSF52540 6 250 3.13E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15705 2c339c65864113499aa645e348069fa2 319 PANTHER PTHR24220 8 319 1.4E-171 T 23-04-2016 CLI_RS15705 2c339c65864113499aa645e348069fa2 319 PANTHER PTHR24220:SF336 8 319 1.4E-171 T 23-04-2016 CLI_RS15705 2c339c65864113499aa645e348069fa2 319 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 297 7.5E-17 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLI_RS15705 2c339c65864113499aa645e348069fa2 319 Gene3D G3DSA:3.40.50.300 2 254 9.5E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15705 2c339c65864113499aa645e348069fa2 319 Pfam PF00005 ABC transporter 28 178 2.2E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS04400 e48f49dc4fb374ada39851c6e81df4e7 392 PANTHER PTHR30244 5 390 1.0E-166 T 23-04-2016 CLI_RS04400 e48f49dc4fb374ada39851c6e81df4e7 392 SUPERFAMILY SSF53383 4 389 8.5E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS04400 e48f49dc4fb374ada39851c6e81df4e7 392 PIRSF PIRSF000390 1 391 4.1E-94 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLI_RS04400 e48f49dc4fb374ada39851c6e81df4e7 392 Gene3D G3DSA:3.90.1150.10 261 389 1.3E-37 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS04400 e48f49dc4fb374ada39851c6e81df4e7 392 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 383 4.3E-96 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLI_RS04400 e48f49dc4fb374ada39851c6e81df4e7 392 PANTHER PTHR30244:SF3 5 390 1.0E-166 T 23-04-2016 CLI_RS04400 e48f49dc4fb374ada39851c6e81df4e7 392 Gene3D G3DSA:3.40.640.10 4 260 1.6E-75 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS09535 653e2225b67f6c91946e22cfc2530318 401 Pfam PF13742 OB-fold nucleic acid binding domain 6 100 2.6E-31 T 23-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CLI_RS09535 653e2225b67f6c91946e22cfc2530318 401 PANTHER PTHR30008:SF0 1 400 6.1E-155 T 23-04-2016 CLI_RS09535 653e2225b67f6c91946e22cfc2530318 401 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 3 396 26.111 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CLI_RS09535 653e2225b67f6c91946e22cfc2530318 401 Pfam PF02601 Exonuclease VII, large subunit 325 392 3.7E-10 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CLI_RS09535 653e2225b67f6c91946e22cfc2530318 401 Pfam PF02601 Exonuclease VII, large subunit 124 343 1.1E-73 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CLI_RS09535 653e2225b67f6c91946e22cfc2530318 401 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 7 395 2.0E-145 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CLI_RS09535 653e2225b67f6c91946e22cfc2530318 401 PANTHER PTHR30008 1 400 6.1E-155 T 23-04-2016 CLI_RS11185 4965b45a6d286e31b48b1a7b0d3b8690 380 Pfam PF02595 Glycerate kinase family 3 374 8.3E-146 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CLI_RS11185 4965b45a6d286e31b48b1a7b0d3b8690 380 PANTHER PTHR21599:SF0 1 380 5.3E-171 T 23-04-2016 CLI_RS11185 4965b45a6d286e31b48b1a7b0d3b8690 380 PIRSF PIRSF006078 1 379 1.6E-136 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CLI_RS11185 4965b45a6d286e31b48b1a7b0d3b8690 380 Gene3D G3DSA:3.90.1510.10 42 275 1.2E-99 T 23-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 CLI_RS11185 4965b45a6d286e31b48b1a7b0d3b8690 380 PANTHER PTHR21599 1 380 5.3E-171 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CLI_RS11185 4965b45a6d286e31b48b1a7b0d3b8690 380 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.5E-156 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CLI_RS11185 4965b45a6d286e31b48b1a7b0d3b8690 380 SUPERFAMILY SSF110738 1 376 1.31E-137 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CLI_RS01980 1ba2b428d2e7ffb827d3a47af9441f71 188 Pfam PF06962 Putative rRNA methylase 51 186 1.8E-53 T 23-04-2016 IPR010719 Putative rRNA methylase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CLI_RS01980 1ba2b428d2e7ffb827d3a47af9441f71 188 PANTHER PTHR35276 7 188 1.9E-62 T 23-04-2016 CLI_RS01980 1ba2b428d2e7ffb827d3a47af9441f71 188 SUPERFAMILY SSF53335 21 157 2.15E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS01980 1ba2b428d2e7ffb827d3a47af9441f71 188 PANTHER PTHR35276:SF1 7 188 1.9E-62 T 23-04-2016 CLI_RS01980 1ba2b428d2e7ffb827d3a47af9441f71 188 Gene3D G3DSA:3.40.50.150 16 156 3.0E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS01205 46b43627cecd5d4b6fcd15933ecbfa3f 233 PANTHER PTHR10434:SF21 1 232 3.9E-55 T 23-04-2016 CLI_RS01205 46b43627cecd5d4b6fcd15933ecbfa3f 233 PANTHER PTHR10434 1 232 3.9E-55 T 23-04-2016 CLI_RS01205 46b43627cecd5d4b6fcd15933ecbfa3f 233 SMART SM00563 51 164 2.3E-25 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CLI_RS01205 46b43627cecd5d4b6fcd15933ecbfa3f 233 SUPERFAMILY SSF69593 19 232 3.4E-47 T 23-04-2016 CLI_RS01205 46b43627cecd5d4b6fcd15933ecbfa3f 233 Gene3D G3DSA:3.40.1130.10 27 222 5.6E-30 T 23-04-2016 CLI_RS01205 46b43627cecd5d4b6fcd15933ecbfa3f 233 Pfam PF01553 Acyltransferase 36 162 2.1E-22 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CLI_RS10530 57217397525bbdb6c5e6485499c61b7e 532 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 5 529 9.5E-251 T 23-04-2016 IPR013357 Acetaldehyde dehydrogenase, acetylating CLI_RS10530 57217397525bbdb6c5e6485499c61b7e 532 Gene3D G3DSA:3.40.605.10 23 230 1.2E-20 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CLI_RS10530 57217397525bbdb6c5e6485499c61b7e 532 Gene3D G3DSA:3.40.309.10 315 403 4.5E-22 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLI_RS10530 57217397525bbdb6c5e6485499c61b7e 532 Gene3D G3DSA:3.40.309.10 231 278 4.5E-22 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLI_RS10530 57217397525bbdb6c5e6485499c61b7e 532 Pfam PF00171 Aldehyde dehydrogenase family 22 273 2.2E-22 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CLI_RS10530 57217397525bbdb6c5e6485499c61b7e 532 PANTHER PTHR11699:SF168 1 283 8.3E-150 T 23-04-2016 CLI_RS10530 57217397525bbdb6c5e6485499c61b7e 532 SUPERFAMILY SSF53720 11 448 1.01E-79 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CLI_RS10530 57217397525bbdb6c5e6485499c61b7e 532 PANTHER PTHR11699 1 283 8.3E-150 T 23-04-2016 CLI_RS08555 3106020f0c88e8a5d0fdd3841d694e95 75 PANTHER PTHR24220 3 70 4.1E-24 T 23-04-2016 CLI_RS08555 3106020f0c88e8a5d0fdd3841d694e95 75 SUPERFAMILY SSF52540 6 69 7.45E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08555 3106020f0c88e8a5d0fdd3841d694e95 75 Pfam PF00005 ABC transporter 24 70 3.1E-13 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS08555 3106020f0c88e8a5d0fdd3841d694e95 75 PANTHER PTHR24220:SF255 3 70 4.1E-24 T 23-04-2016 CLI_RS08555 3106020f0c88e8a5d0fdd3841d694e95 75 Gene3D G3DSA:3.40.50.300 9 72 5.7E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15025 ca4d790611ec4635c14dbd6d45f2fc88 427 SUPERFAMILY SSF49785 161 294 5.65E-10 T 23-04-2016 IPR008979 Galactose-binding domain-like CLI_RS15025 ca4d790611ec4635c14dbd6d45f2fc88 427 Gene3D G3DSA:2.60.120.260 175 307 5.4E-12 T 23-04-2016 IPR008979 Galactose-binding domain-like CLI_RS15025 ca4d790611ec4635c14dbd6d45f2fc88 427 Pfam PF00754 F5/8 type C domain 181 296 8.1E-8 T 23-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain CLI_RS14105 4fd5c5e3433b2f859205b61f02254af2 369 SUPERFAMILY SSF50998 56 353 4.45E-15 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CLI_RS14105 4fd5c5e3433b2f859205b61f02254af2 369 Gene3D G3DSA:2.130.10.10 98 164 4.5E-5 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CLI_RS14105 4fd5c5e3433b2f859205b61f02254af2 369 Gene3D G3DSA:2.130.10.10 221 306 4.5E-5 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CLI_RS14105 4fd5c5e3433b2f859205b61f02254af2 369 Pfam PF13360 PQQ-like domain 76 237 1.2E-7 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat CLI_RS12565 93b56a9287fc840b27c76e7edd903374 395 PANTHER PTHR14359 1 393 2.2E-190 T 23-04-2016 CLI_RS12565 93b56a9287fc840b27c76e7edd903374 395 Gene3D G3DSA:3.40.50.10300 182 393 5.9E-81 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CLI_RS12565 93b56a9287fc840b27c76e7edd903374 395 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 391 6.7E-143 T 23-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 CLI_RS12565 93b56a9287fc840b27c76e7edd903374 395 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 366 1.1E-69 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CLI_RS12565 93b56a9287fc840b27c76e7edd903374 395 SUPERFAMILY SSF102645 182 393 4.45E-72 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CLI_RS12565 93b56a9287fc840b27c76e7edd903374 395 Gene3D G3DSA:3.40.50.1950 2 178 6.3E-66 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CLI_RS12565 93b56a9287fc840b27c76e7edd903374 395 SUPERFAMILY SSF52507 2 176 3.92E-61 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CLI_RS12565 93b56a9287fc840b27c76e7edd903374 395 PANTHER PTHR14359:SF20 1 393 2.2E-190 T 23-04-2016 CLI_RS12565 93b56a9287fc840b27c76e7edd903374 395 Pfam PF02441 Flavoprotein 6 131 7.6E-35 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CLI_RS07480 f7cd51fe4afa03f8725f04c642495945 308 Pfam PF04389 Peptidase family M28 141 291 7.9E-13 T 23-04-2016 IPR007484 Peptidase M28 CLI_RS07480 f7cd51fe4afa03f8725f04c642495945 308 Gene3D G3DSA:3.40.630.10 26 78 3.1E-16 T 23-04-2016 CLI_RS07480 f7cd51fe4afa03f8725f04c642495945 308 Gene3D G3DSA:3.40.630.10 129 290 3.1E-16 T 23-04-2016 CLI_RS07480 f7cd51fe4afa03f8725f04c642495945 308 SUPERFAMILY SSF53187 26 78 2.34E-16 T 23-04-2016 CLI_RS07480 f7cd51fe4afa03f8725f04c642495945 308 SUPERFAMILY SSF53187 140 294 2.34E-16 T 23-04-2016 CLI_RS05770 d59497678b20d4e75750074b978c6e7d 465 PANTHER PTHR30330:SF3 1 464 5.0E-238 T 23-04-2016 CLI_RS05770 d59497678b20d4e75750074b978c6e7d 465 PANTHER PTHR30330 1 464 5.0E-238 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05770 d59497678b20d4e75750074b978c6e7d 465 PRINTS PR00175 Sodium/alanine symporter signature 352 374 5.1E-47 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05770 d59497678b20d4e75750074b978c6e7d 465 PRINTS PR00175 Sodium/alanine symporter signature 305 323 5.1E-47 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05770 d59497678b20d4e75750074b978c6e7d 465 PRINTS PR00175 Sodium/alanine symporter signature 210 229 5.1E-47 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05770 d59497678b20d4e75750074b978c6e7d 465 PRINTS PR00175 Sodium/alanine symporter signature 411 431 5.1E-47 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05770 d59497678b20d4e75750074b978c6e7d 465 PRINTS PR00175 Sodium/alanine symporter signature 93 115 5.1E-47 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05770 d59497678b20d4e75750074b978c6e7d 465 PRINTS PR00175 Sodium/alanine symporter signature 182 200 5.1E-47 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05770 d59497678b20d4e75750074b978c6e7d 465 Pfam PF01235 Sodium:alanine symporter family 57 440 4.3E-119 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05770 d59497678b20d4e75750074b978c6e7d 465 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 438 2.0E-128 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS05770 d59497678b20d4e75750074b978c6e7d 465 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS09710 feff7a577b32a419cb19d955b1d081d5 524 PANTHER PTHR37835 301 523 5.1E-128 T 23-04-2016 CLI_RS09710 feff7a577b32a419cb19d955b1d081d5 524 PANTHER PTHR37835 1 280 5.1E-128 T 23-04-2016 CLI_RS09710 feff7a577b32a419cb19d955b1d081d5 524 PANTHER PTHR37835:SF1 301 523 5.1E-128 T 23-04-2016 CLI_RS09710 feff7a577b32a419cb19d955b1d081d5 524 PANTHER PTHR37835:SF1 1 280 5.1E-128 T 23-04-2016 CLI_RS09710 feff7a577b32a419cb19d955b1d081d5 524 TIGRFAM TIGR02806 clostrip: clostripain 54 524 2.5E-261 T 23-04-2016 IPR014173 Peptidase C11, Clostripain Clostridium species CLI_RS09710 feff7a577b32a419cb19d955b1d081d5 524 Pfam PF03415 Clostripain family 60 508 3.8E-96 T 23-04-2016 IPR005077 Peptidase C11, clostripain CLI_RS07900 803705e6cbae173a8b4a8aa0cb1e8115 467 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 233 452 3.0E-39 T 23-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CLI_RS07900 803705e6cbae173a8b4a8aa0cb1e8115 467 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 10 230 1.2E-41 T 23-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CLI_RS07900 803705e6cbae173a8b4a8aa0cb1e8115 467 SUPERFAMILY SSF103473 7 450 9.59E-37 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS07900 803705e6cbae173a8b4a8aa0cb1e8115 467 Pfam PF00854 POT family 85 208 1.9E-19 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS07900 803705e6cbae173a8b4a8aa0cb1e8115 467 Pfam PF00854 POT family 238 420 3.8E-36 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS07900 803705e6cbae173a8b4a8aa0cb1e8115 467 Gene3D G3DSA:1.20.1250.20 245 450 6.7E-11 T 23-04-2016 CLI_RS07900 803705e6cbae173a8b4a8aa0cb1e8115 467 Gene3D G3DSA:1.20.1250.20 12 214 7.3E-18 T 23-04-2016 CLI_RS07900 803705e6cbae173a8b4a8aa0cb1e8115 467 PANTHER PTHR11654 6 459 3.3E-160 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS07900 803705e6cbae173a8b4a8aa0cb1e8115 467 PANTHER PTHR11654:SF119 6 459 3.3E-160 T 23-04-2016 CLI_RS18455 a0f2c0c11106de9af350c238cbc92158 498 Gene3D G3DSA:3.20.70.20 78 464 4.1E-26 T 23-04-2016 CLI_RS18455 a0f2c0c11106de9af350c238cbc92158 498 PIRSF PIRSF028991 1 498 1.2E-181 T 23-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted CLI_RS18455 a0f2c0c11106de9af350c238cbc92158 498 Pfam PF11230 Protein of unknown function (DUF3029) 13 495 1.3E-229 T 23-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted CLI_RS18455 a0f2c0c11106de9af350c238cbc92158 498 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 3 495 8.1E-245 T 23-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted CLI_RS18455 a0f2c0c11106de9af350c238cbc92158 498 SUPERFAMILY SSF51998 6 470 6.41E-83 T 23-04-2016 CLI_RS07860 bf5b0639b970fec0fc53993995c15dc0 121 Gene3D G3DSA:3.10.180.10 5 119 3.1E-21 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS07860 bf5b0639b970fec0fc53993995c15dc0 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 117 1.5E-8 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLI_RS07860 bf5b0639b970fec0fc53993995c15dc0 121 SUPERFAMILY SSF54593 4 120 1.18E-19 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS14990 dff9943ef8fb94777508b45e81c97af5 212 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 7 204 24.818 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CLI_RS14990 dff9943ef8fb94777508b45e81c97af5 212 Gene3D G3DSA:3.40.50.300 5 201 5.2E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14990 dff9943ef8fb94777508b45e81c97af5 212 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 10 195 8.6E-47 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CLI_RS14990 dff9943ef8fb94777508b45e81c97af5 212 SUPERFAMILY SSF52540 9 198 6.81E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14990 dff9943ef8fb94777508b45e81c97af5 212 PANTHER PTHR10695 8 202 1.2E-65 T 23-04-2016 CLI_RS14990 dff9943ef8fb94777508b45e81c97af5 212 Pfam PF01121 Dephospho-CoA kinase 10 187 5.4E-50 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CLI_RS12070 47b3ad0103c491de644d19a6297f109c 90 PANTHER PTHR34215 1 90 3.7E-33 T 23-04-2016 CLI_RS12070 47b3ad0103c491de644d19a6297f109c 90 Pfam PF04296 Protein of unknown function (DUF448) 9 82 2.4E-30 T 23-04-2016 IPR007393 Domain of unknown function DUF448 CLI_RS12070 47b3ad0103c491de644d19a6297f109c 90 PANTHER PTHR34215:SF1 1 90 3.7E-33 T 23-04-2016 CLI_RS12070 47b3ad0103c491de644d19a6297f109c 90 Gene3D G3DSA:3.30.1230.10 1 87 2.8E-35 T 23-04-2016 IPR007393 Domain of unknown function DUF448 CLI_RS12070 47b3ad0103c491de644d19a6297f109c 90 SUPERFAMILY SSF64376 4 86 1.57E-28 T 23-04-2016 IPR007393 Domain of unknown function DUF448 CLI_RS03965 c523156ff0f0b2397411c59f60964875 379 Pfam PF07261 Replication initiation and membrane attachment 268 335 3.5E-15 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS03965 c523156ff0f0b2397411c59f60964875 379 PANTHER PTHR37293 221 379 1.3E-136 T 23-04-2016 CLI_RS03965 c523156ff0f0b2397411c59f60964875 379 PANTHER PTHR37293 2 131 1.3E-136 T 23-04-2016 CLI_RS03965 c523156ff0f0b2397411c59f60964875 379 Gene3D G3DSA:1.10.10.630 261 333 2.3E-17 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS03965 c523156ff0f0b2397411c59f60964875 379 PANTHER PTHR37293:SF1 221 379 1.3E-136 T 23-04-2016 CLI_RS03965 c523156ff0f0b2397411c59f60964875 379 PANTHER PTHR37293:SF1 2 131 1.3E-136 T 23-04-2016 CLI_RS03965 c523156ff0f0b2397411c59f60964875 379 SUPERFAMILY SSF158499 267 328 4.18E-13 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS03965 c523156ff0f0b2397411c59f60964875 379 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 266 333 2.0E-13 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS16845 f1e7d28c1bfdb3b34e456ff0fa7f6148 412 SUPERFAMILY SSF89796 3 406 8.5E-96 T 23-04-2016 IPR023606 CoA-transferase family III domain CLI_RS16845 f1e7d28c1bfdb3b34e456ff0fa7f6148 412 Pfam PF02515 CoA-transferase family III 9 382 3.5E-84 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 CLI_RS16845 f1e7d28c1bfdb3b34e456ff0fa7f6148 412 PANTHER PTHR24023:SF593 1 393 5.6E-25 T 23-04-2016 CLI_RS16845 f1e7d28c1bfdb3b34e456ff0fa7f6148 412 Gene3D G3DSA:3.30.1540.10 245 314 1.0E-10 T 23-04-2016 CLI_RS16845 f1e7d28c1bfdb3b34e456ff0fa7f6148 412 PANTHER PTHR24023 1 393 5.6E-25 T 23-04-2016 CLI_RS16845 f1e7d28c1bfdb3b34e456ff0fa7f6148 412 Gene3D G3DSA:3.40.50.10540 315 407 4.7E-86 T 23-04-2016 IPR023606 CoA-transferase family III domain CLI_RS16845 f1e7d28c1bfdb3b34e456ff0fa7f6148 412 Gene3D G3DSA:3.40.50.10540 4 223 4.7E-86 T 23-04-2016 IPR023606 CoA-transferase family III domain CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 Gene3D G3DSA:3.40.710.10 242 584 1.2E-105 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 SMART SM00740 600 660 1.9E-16 T 23-04-2016 IPR005543 PASTA domain CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 SMART SM00740 664 723 3.9E-9 T 23-04-2016 IPR005543 PASTA domain CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 Pfam PF03717 Penicillin-binding Protein dimerisation domain 59 214 1.3E-22 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 SUPERFAMILY SSF56519 55 235 4.71E-44 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 Pfam PF03793 PASTA domain 668 719 1.8E-9 T 23-04-2016 IPR005543 PASTA domain CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 Pfam PF03793 PASTA domain 604 659 2.5E-12 T 23-04-2016 IPR005543 PASTA domain CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 PANTHER PTHR30627 2 619 2.9E-240 T 23-04-2016 CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 SUPERFAMILY SSF54184 668 720 2.88E-9 T 23-04-2016 CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 SUPERFAMILY SSF54184 604 659 9.68E-12 T 23-04-2016 CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 16 660 4.0E-267 T 23-04-2016 IPR011927 Stage V sporulation protein D CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 Gene3D G3DSA:3.90.1310.10 142 241 6.7E-31 T 23-04-2016 CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 PANTHER PTHR30627:SF1 2 619 2.9E-240 T 23-04-2016 CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 SUPERFAMILY SSF56601 187 587 2.29E-99 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS07510 c5e32294396badf2959bbde9027f97c9 726 Pfam PF00905 Penicillin binding protein transpeptidase domain 262 575 1.1E-80 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLI_RS06955 88be047902a4ddca5580b0c1b52c1c49 470 PANTHER PTHR30489 156 228 3.9E-31 T 23-04-2016 CLI_RS06955 88be047902a4ddca5580b0c1b52c1c49 470 PANTHER PTHR30489 246 401 3.9E-31 T 23-04-2016 CLI_RS06955 88be047902a4ddca5580b0c1b52c1c49 470 PANTHER PTHR30489 420 469 3.9E-31 T 23-04-2016 CLI_RS06955 88be047902a4ddca5580b0c1b52c1c49 470 Pfam PF02687 FtsX-like permease family 314 462 1.6E-22 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS10265 b6394c38ac96c135ad931f8d2117679d 362 Pfam PF00557 Metallopeptidase family M24 140 342 5.4E-57 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS10265 b6394c38ac96c135ad931f8d2117679d 362 Gene3D G3DSA:3.40.350.10 4 127 3.6E-13 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLI_RS10265 b6394c38ac96c135ad931f8d2117679d 362 Pfam PF01321 Creatinase/Prolidase N-terminal domain 6 131 2.4E-14 T 23-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 CLI_RS10265 b6394c38ac96c135ad931f8d2117679d 362 Gene3D G3DSA:3.90.230.10 130 358 3.8E-76 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS10265 b6394c38ac96c135ad931f8d2117679d 362 PANTHER PTHR10804:SF86 112 362 1.0E-77 T 23-04-2016 CLI_RS10265 b6394c38ac96c135ad931f8d2117679d 362 PANTHER PTHR10804:SF86 3 13 1.0E-77 T 23-04-2016 CLI_RS10265 b6394c38ac96c135ad931f8d2117679d 362 SUPERFAMILY SSF53092 4 130 1.67E-14 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLI_RS10265 b6394c38ac96c135ad931f8d2117679d 362 PANTHER PTHR10804 112 362 1.0E-77 T 23-04-2016 CLI_RS10265 b6394c38ac96c135ad931f8d2117679d 362 PANTHER PTHR10804 3 13 1.0E-77 T 23-04-2016 CLI_RS10265 b6394c38ac96c135ad931f8d2117679d 362 SUPERFAMILY SSF55920 130 358 4.71E-70 T 23-04-2016 IPR000994 Peptidase M24, structural domain CLI_RS11620 0cee1e6f8baf03121cc96d4ed803f113 86 Gene3D G3DSA:3.50.50.60 3 79 2.4E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS11620 0cee1e6f8baf03121cc96d4ed803f113 86 SUPERFAMILY SSF51905 2 66 1.73E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS11620 0cee1e6f8baf03121cc96d4ed803f113 86 PRINTS PR00419 Adrenodoxin reductase family signature 2 24 4.7E-5 T 23-04-2016 CLI_RS11620 0cee1e6f8baf03121cc96d4ed803f113 86 PRINTS PR00419 Adrenodoxin reductase family signature 25 38 4.7E-5 T 23-04-2016 CLI_RS11620 0cee1e6f8baf03121cc96d4ed803f113 86 Pfam PF01134 Glucose inhibited division protein A 2 79 1.8E-12 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 CLI_RS04485 203794a1844c55a7231e6025691c7257 191 Pfam PF13302 Acetyltransferase (GNAT) domain 12 152 1.6E-25 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS04485 203794a1844c55a7231e6025691c7257 191 PANTHER PTHR13256 1 187 1.7E-65 T 23-04-2016 CLI_RS04485 203794a1844c55a7231e6025691c7257 191 SUPERFAMILY SSF55729 7 178 9.78E-45 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04485 203794a1844c55a7231e6025691c7257 191 Gene3D G3DSA:3.40.630.30 8 180 2.0E-48 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04485 203794a1844c55a7231e6025691c7257 191 PANTHER PTHR13256:SF43 1 187 1.7E-65 T 23-04-2016 CLI_RS17760 f0bea05534304622dc8fd4a612458c0d 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 119 2.7E-42 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17760 f0bea05534304622dc8fd4a612458c0d 119 SUPERFAMILY SSF53137 7 117 1.57E-51 T 23-04-2016 CLI_RS17760 f0bea05534304622dc8fd4a612458c0d 119 Gene3D G3DSA:3.30.420.100 24 119 3.5E-39 T 23-04-2016 CLI_RS17760 f0bea05534304622dc8fd4a612458c0d 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 119 29.627 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17760 f0bea05534304622dc8fd4a612458c0d 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 119 5.0E-48 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17760 f0bea05534304622dc8fd4a612458c0d 119 PANTHER PTHR12899 1 119 4.0E-44 T 23-04-2016 CLI_RS18465 a1093c27c74dafd5e87f6f818aa2aef5 83 SUPERFAMILY SSF55021 1 79 3.2E-24 T 23-04-2016 CLI_RS18465 a1093c27c74dafd5e87f6f818aa2aef5 83 TIGRFAM TIGR03959 hyd_TM1266: putative iron-only hydrogenase system regulator 3 78 1.8E-30 T 23-04-2016 IPR023860 [FeFe]-hydrogenase system regulator TM1266 CLI_RS18465 a1093c27c74dafd5e87f6f818aa2aef5 83 Gene3D G3DSA:3.30.70.1150 1 82 2.1E-31 T 23-04-2016 CLI_RS17320 81eee5eb0b649af7d59d830235cc004d 445 SUPERFAMILY SSF142338 101 412 6.41E-103 T 23-04-2016 CLI_RS17320 81eee5eb0b649af7d59d830235cc004d 445 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 104 414 5.3E-121 T 23-04-2016 IPR010119 Gluconeogenesis factor CLI_RS17320 81eee5eb0b649af7d59d830235cc004d 445 Gene3D G3DSA:3.40.50.10680 174 415 5.0E-56 T 23-04-2016 CLI_RS17320 81eee5eb0b649af7d59d830235cc004d 445 PANTHER PTHR30135:SF3 2 427 2.5E-217 T 23-04-2016 CLI_RS17320 81eee5eb0b649af7d59d830235cc004d 445 Hamap MF_00973 Gluconeogenesis factor. 100 417 35.24 T 23-04-2016 IPR010119 Gluconeogenesis factor CLI_RS17320 81eee5eb0b649af7d59d830235cc004d 445 Pfam PF01933 Uncharacterised protein family UPF0052 104 392 8.4E-112 T 23-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CLI_RS17320 81eee5eb0b649af7d59d830235cc004d 445 PANTHER PTHR30135 2 427 2.5E-217 T 23-04-2016 CLI_RS08445 ee075970715a4ca40992bb8fae40ca1b 233 Pfam PF13599 Pentapeptide repeats (9 copies) 48 119 2.4E-8 T 23-04-2016 IPR001646 Pentapeptide repeat CLI_RS08445 ee075970715a4ca40992bb8fae40ca1b 233 SUPERFAMILY SSF141571 24 120 3.66E-20 T 23-04-2016 CLI_RS08445 ee075970715a4ca40992bb8fae40ca1b 233 PANTHER PTHR14136 1 121 1.4E-20 T 23-04-2016 CLI_RS01260 f64ca3a94e73f496e0ca4180a346b40c 367 SUPERFAMILY SSF53822 41 282 7.74E-10 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CLI_RS01260 f64ca3a94e73f496e0ca4180a346b40c 367 PANTHER PTHR34296 3 366 7.1E-134 T 23-04-2016 CLI_RS01260 f64ca3a94e73f496e0ca4180a346b40c 367 Gene3D G3DSA:3.40.50.2300 36 159 6.8E-51 T 23-04-2016 CLI_RS01260 f64ca3a94e73f496e0ca4180a346b40c 367 Pfam PF02608 Basic membrane protein 44 353 2.6E-64 T 23-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 CLI_RS01260 f64ca3a94e73f496e0ca4180a346b40c 367 PANTHER PTHR34296:SF2 3 366 7.1E-134 T 23-04-2016 CLI_RS01260 f64ca3a94e73f496e0ca4180a346b40c 367 Gene3D G3DSA:3.40.50.2300 160 323 6.9E-52 T 23-04-2016 CLI_RS17435 b4d3929ac0c216e194e082f8073691b8 204 PIRSF PIRSF033729 1 204 2.2E-55 T 23-04-2016 IPR014584 Uncharacterised conserved protein UCP033729 CLI_RS17435 b4d3929ac0c216e194e082f8073691b8 204 SUPERFAMILY SSF89392 34 201 3.49E-5 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX CLI_RS17435 b4d3929ac0c216e194e082f8073691b8 204 Gene3D G3DSA:2.50.20.10 35 200 1.3E-4 T 23-04-2016 CLI_RS05790 691d74ca9b810c3c77025b4f06680ca6 181 Gene3D G3DSA:1.25.40.10 37 172 1.9E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS05790 691d74ca9b810c3c77025b4f06680ca6 181 Pfam PF13181 Tetratricopeptide repeat 40 68 4.4E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS05790 691d74ca9b810c3c77025b4f06680ca6 181 SUPERFAMILY SSF48452 41 178 6.96E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS13585 99f44754b73089630ce84eba6b4dc8ac 812 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 498 797 1.3E-37 T 23-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CLI_RS13585 99f44754b73089630ce84eba6b4dc8ac 812 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 7 110 2.1E-19 T 23-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CLI_RS13585 99f44754b73089630ce84eba6b4dc8ac 812 PANTHER PTHR30288 747 811 1.3E-96 T 23-04-2016 CLI_RS13585 99f44754b73089630ce84eba6b4dc8ac 812 PANTHER PTHR30288 597 730 1.3E-96 T 23-04-2016 CLI_RS13585 99f44754b73089630ce84eba6b4dc8ac 812 PANTHER PTHR30288 1 199 1.3E-96 T 23-04-2016 CLI_RS13585 99f44754b73089630ce84eba6b4dc8ac 812 PANTHER PTHR30288 288 581 1.3E-96 T 23-04-2016 CLI_RS13585 99f44754b73089630ce84eba6b4dc8ac 812 PANTHER PTHR30288:SF0 747 811 1.3E-96 T 23-04-2016 CLI_RS13585 99f44754b73089630ce84eba6b4dc8ac 812 PANTHER PTHR30288:SF0 597 730 1.3E-96 T 23-04-2016 CLI_RS13585 99f44754b73089630ce84eba6b4dc8ac 812 PANTHER PTHR30288:SF0 1 199 1.3E-96 T 23-04-2016 CLI_RS13585 99f44754b73089630ce84eba6b4dc8ac 812 PANTHER PTHR30288:SF0 288 581 1.3E-96 T 23-04-2016 CLI_RS09670 f3555182da079b06d10aa8d6c78483a5 273 Pfam PF01678 Diaminopimelate epimerase 3 126 3.5E-32 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS09670 f3555182da079b06d10aa8d6c78483a5 273 Pfam PF01678 Diaminopimelate epimerase 156 264 1.0E-17 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS09670 f3555182da079b06d10aa8d6c78483a5 273 SUPERFAMILY SSF54506 143 272 2.44E-38 T 23-04-2016 CLI_RS09670 f3555182da079b06d10aa8d6c78483a5 273 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 273 35.287 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS09670 f3555182da079b06d10aa8d6c78483a5 273 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 271 7.1E-82 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS09670 f3555182da079b06d10aa8d6c78483a5 273 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 23-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS09670 f3555182da079b06d10aa8d6c78483a5 273 Gene3D G3DSA:3.10.310.10 1 124 2.0E-42 T 23-04-2016 CLI_RS09670 f3555182da079b06d10aa8d6c78483a5 273 SUPERFAMILY SSF54506 1 131 8.63E-39 T 23-04-2016 CLI_RS09670 f3555182da079b06d10aa8d6c78483a5 273 Gene3D G3DSA:3.10.310.10 125 261 7.6E-40 T 23-04-2016 CLI_RS09670 f3555182da079b06d10aa8d6c78483a5 273 PANTHER PTHR31689 1 272 8.4E-113 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CLI_RS04600 1be65d747f7ec67656330e9c7d15fa80 48 Gene3D G3DSA:1.10.1660.10 2 23 3.2E-5 T 23-04-2016 CLI_RS04600 1be65d747f7ec67656330e9c7d15fa80 48 SUPERFAMILY SSF46955 3 24 3.11E-5 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS10400 67e135d3b5bd6ab7a35a219176433761 101 SUPERFAMILY SSF89447 10 55 4.84E-11 T 23-04-2016 CLI_RS10400 67e135d3b5bd6ab7a35a219176433761 101 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 14 49 1.4E-8 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 CLI_RS10400 67e135d3b5bd6ab7a35a219176433761 101 Gene3D G3DSA:2.10.260.10 13 56 4.2E-12 T 23-04-2016 CLI_RS10400 67e135d3b5bd6ab7a35a219176433761 101 PANTHER PTHR34860:SF1 10 101 5.9E-53 T 23-04-2016 CLI_RS10400 67e135d3b5bd6ab7a35a219176433761 101 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 14 55 1.4E-14 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 CLI_RS10400 67e135d3b5bd6ab7a35a219176433761 101 SMART SM00966 14 58 9.8E-10 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 CLI_RS10400 67e135d3b5bd6ab7a35a219176433761 101 PANTHER PTHR34860 10 101 5.9E-53 T 23-04-2016 CLI_RS17790 fdad47752323bcec81e3034daaff7e15 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.7E-57 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CLI_RS17790 fdad47752323bcec81e3034daaff7e15 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site CLI_RS17790 fdad47752323bcec81e3034daaff7e15 122 PANTHER PTHR11761 1 122 2.7E-75 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLI_RS17790 fdad47752323bcec81e3034daaff7e15 122 SUPERFAMILY SSF50193 1 122 2.49E-51 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLI_RS17790 fdad47752323bcec81e3034daaff7e15 122 Gene3D G3DSA:2.40.150.20 1 122 1.3E-53 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLI_RS17790 fdad47752323bcec81e3034daaff7e15 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.388 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLI_RS17790 fdad47752323bcec81e3034daaff7e15 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.3E-54 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLI_RS17790 fdad47752323bcec81e3034daaff7e15 122 SMART SM01374 1 122 4.6E-86 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLI_RS18205 c7cc442dd0d20c3efb31b3d9e46cb41e 79 Pfam PF01479 S4 domain 1 46 4.2E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS18205 c7cc442dd0d20c3efb31b3d9e46cb41e 79 PIRSF PIRSF038881 1 79 2.4E-31 T 23-04-2016 IPR025490 RNA-binding protein, HP1423 type CLI_RS18205 c7cc442dd0d20c3efb31b3d9e46cb41e 79 SUPERFAMILY SSF55174 2 76 7.33E-19 T 23-04-2016 CLI_RS18205 c7cc442dd0d20c3efb31b3d9e46cb41e 79 Gene3D G3DSA:3.10.290.10 2 77 1.1E-20 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS18205 c7cc442dd0d20c3efb31b3d9e46cb41e 79 SMART SM00363 1 61 3.7E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS17585 f088999bdac221d39350e510e71c4698 426 Pfam PF07949 YbbR-like protein 228 309 6.8E-6 T 23-04-2016 IPR012505 YbbR-like CLI_RS17585 f088999bdac221d39350e510e71c4698 426 Pfam PF07949 YbbR-like protein 136 220 5.3E-11 T 23-04-2016 IPR012505 YbbR-like CLI_RS17585 f088999bdac221d39350e510e71c4698 426 PANTHER PTHR37804 2 426 3.5E-82 T 23-04-2016 CLI_RS18735 d519d23ffd4b2de26353ba1d79f1d42d 105 Pfam PF12643 MazG-like family 8 94 8.8E-26 T 23-04-2016 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12 CLI_RS13400 3a574de77bedbbf47232eb2ed17bc428 149 Pfam PF04892 VanZ like family 11 140 6.2E-26 T 23-04-2016 IPR006976 VanZ-like CLI_RS13400 3a574de77bedbbf47232eb2ed17bc428 149 PIRSF PIRSF019083 1 149 1.5E-40 T 23-04-2016 IPR016747 Phosphotransbutyrylase CLI_RS04740 daec2058a5bfea339725a330a1034b96 125 SUPERFAMILY SSF141523 16 124 9.29E-37 T 23-04-2016 CLI_RS04740 daec2058a5bfea339725a330a1034b96 125 Pfam PF03734 L,D-transpeptidase catalytic domain 16 124 1.2E-21 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 CLI_RS04740 daec2058a5bfea339725a330a1034b96 125 PANTHER PTHR30582 1 125 6.1E-39 T 23-04-2016 CLI_RS04740 daec2058a5bfea339725a330a1034b96 125 Gene3D G3DSA:2.40.440.10 16 125 1.1E-39 T 23-04-2016 CLI_RS11930 5eb117c5bf256733871dfa9e53f67e84 125 Gene3D G3DSA:1.10.260.40 4 71 1.1E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS11930 5eb117c5bf256733871dfa9e53f67e84 125 Pfam PF01381 Helix-turn-helix 9 63 6.4E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS11930 5eb117c5bf256733871dfa9e53f67e84 125 SMART SM00530 8 64 1.9E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS11930 5eb117c5bf256733871dfa9e53f67e84 125 SUPERFAMILY SSF47413 3 71 8.73E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS08655 c6c7505810c63f8d4a76527fd03a04d8 152 Gene3D G3DSA:3.90.960.10 2 152 3.7E-45 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLI_RS08655 c6c7505810c63f8d4a76527fd03a04d8 152 PANTHER PTHR30411:SF6 3 152 9.3E-80 T 23-04-2016 CLI_RS08655 c6c7505810c63f8d4a76527fd03a04d8 152 SUPERFAMILY SSF55826 5 152 1.7E-38 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLI_RS08655 c6c7505810c63f8d4a76527fd03a04d8 152 PANTHER PTHR30411 3 152 9.3E-80 T 23-04-2016 CLI_RS08655 c6c7505810c63f8d4a76527fd03a04d8 152 Pfam PF04073 Aminoacyl-tRNA editing domain 24 140 9.6E-29 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLI_RS16350 210b4b2e0a99a2224f35eb79d7fdf484 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 452 657 6.1E-41 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS16350 210b4b2e0a99a2224f35eb79d7fdf484 668 SMART SM00283 392 667 4.7E-56 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS16350 210b4b2e0a99a2224f35eb79d7fdf484 668 Gene3D G3DSA:1.10.287.950 407 623 6.5E-47 T 23-04-2016 CLI_RS16350 210b4b2e0a99a2224f35eb79d7fdf484 668 Gene3D G3DSA:3.30.450.20 74 174 8.0E-29 T 23-04-2016 CLI_RS16350 210b4b2e0a99a2224f35eb79d7fdf484 668 PANTHER PTHR32089 1 668 0.0 T 23-04-2016 CLI_RS16350 210b4b2e0a99a2224f35eb79d7fdf484 668 Pfam PF02743 Cache domain 48 268 5.6E-29 T 23-04-2016 IPR033479 Double Cache domain 1 CLI_RS16350 210b4b2e0a99a2224f35eb79d7fdf484 668 PANTHER PTHR32089:SF37 1 668 0.0 T 23-04-2016 CLI_RS16350 210b4b2e0a99a2224f35eb79d7fdf484 668 SUPERFAMILY SSF103190 80 184 1.31E-13 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CLI_RS16350 210b4b2e0a99a2224f35eb79d7fdf484 668 SUPERFAMILY SSF58104 398 667 5.89E-63 T 23-04-2016 CLI_RS16350 210b4b2e0a99a2224f35eb79d7fdf484 668 SUPERFAMILY SSF58104 339 365 5.89E-63 T 23-04-2016 CLI_RS17180 6cf07dbbd2dd6bcee204b2c8e4dcff5b 297 SUPERFAMILY SSF53067 111 296 2.33E-43 T 23-04-2016 CLI_RS17180 6cf07dbbd2dd6bcee204b2c8e4dcff5b 297 Gene3D G3DSA:3.30.420.40 1 121 7.4E-7 T 23-04-2016 CLI_RS17180 6cf07dbbd2dd6bcee204b2c8e4dcff5b 297 SUPERFAMILY SSF53067 1 106 5.28E-17 T 23-04-2016 CLI_RS17180 6cf07dbbd2dd6bcee204b2c8e4dcff5b 297 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 289 2.0E-25 T 23-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS17180 6cf07dbbd2dd6bcee204b2c8e4dcff5b 297 PANTHER PTHR12862 1 297 1.5E-68 T 23-04-2016 CLI_RS08920 515fc3fd27a87de9446c4baf6925c755 80 SUPERFAMILY SSF52833 3 78 3.13E-11 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS08920 515fc3fd27a87de9446c4baf6925c755 80 Gene3D G3DSA:3.40.30.10 4 79 3.0E-10 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS08920 515fc3fd27a87de9446c4baf6925c755 80 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 3 71 4.6E-7 T 23-04-2016 CLI_RS00870 eb24a47ccd1ee923d7b477c0c4087c43 162 PIRSF PIRSF006019 1 161 8.8E-36 T 23-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 CLI_RS00870 eb24a47ccd1ee923d7b477c0c4087c43 162 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 79 124 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLI_RS00870 eb24a47ccd1ee923d7b477c0c4087c43 162 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 134 2.1E-18 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CLI_RS00870 eb24a47ccd1ee923d7b477c0c4087c43 162 PANTHER PTHR11086 1 133 7.2E-35 T 23-04-2016 IPR015517 Deoxycytidylate deaminase-related CLI_RS00870 eb24a47ccd1ee923d7b477c0c4087c43 162 Gene3D G3DSA:3.40.140.10 7 142 1.4E-29 T 23-04-2016 CLI_RS00870 eb24a47ccd1ee923d7b477c0c4087c43 162 SUPERFAMILY SSF53927 8 140 2.58E-25 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CLI_RS13805 cd1cd071337da513af2431d26e83aaf9 297 Gene3D G3DSA:3.20.20.370 74 287 1.2E-51 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS13805 cd1cd071337da513af2431d26e83aaf9 297 Pfam PF01522 Polysaccharide deacetylase 88 195 4.2E-28 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS13805 cd1cd071337da513af2431d26e83aaf9 297 PANTHER PTHR10587:SF15 90 286 2.4E-38 T 23-04-2016 CLI_RS13805 cd1cd071337da513af2431d26e83aaf9 297 SUPERFAMILY SSF88713 90 284 2.72E-46 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLI_RS13805 cd1cd071337da513af2431d26e83aaf9 297 PANTHER PTHR10587 90 286 2.4E-38 T 23-04-2016 CLI_RS09995 0b8e91ac45569f9d1514858a2c7cf313 361 Pfam PF03845 Spore germination protein 9 322 2.2E-77 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS09995 0b8e91ac45569f9d1514858a2c7cf313 361 PANTHER PTHR34975 1 361 1.5E-152 T 23-04-2016 CLI_RS09995 0b8e91ac45569f9d1514858a2c7cf313 361 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 12 357 5.7E-74 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS09995 0b8e91ac45569f9d1514858a2c7cf313 361 PANTHER PTHR34975:SF2 1 361 1.5E-152 T 23-04-2016 CLI_RS01825 1e7628d830e996e413f2ab53b17773b0 118 Pfam PF03788 LrgA family 15 106 2.9E-31 T 23-04-2016 IPR005538 LrgA/CidA family GO:0016021 CLI_RS01825 1e7628d830e996e413f2ab53b17773b0 118 PANTHER PTHR33931 2 117 4.1E-42 T 23-04-2016 CLI_RS01825 1e7628d830e996e413f2ab53b17773b0 118 PANTHER PTHR33931:SF2 2 117 4.1E-42 T 23-04-2016 CLI_RS01185 ad527399178139550e0424b846c3c1a5 231 Pfam PF07486 Cell Wall Hydrolase 132 230 3.1E-28 T 23-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 CLI_RS01185 ad527399178139550e0424b846c3c1a5 231 SUPERFAMILY SSF47090 40 103 1.18E-20 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS01185 ad527399178139550e0424b846c3c1a5 231 PANTHER PTHR21666:SF199 121 229 5.2E-24 T 23-04-2016 CLI_RS01185 ad527399178139550e0424b846c3c1a5 231 Pfam PF01471 Putative peptidoglycan binding domain 46 101 4.2E-17 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS01185 ad527399178139550e0424b846c3c1a5 231 Gene3D G3DSA:1.10.101.10 40 102 7.1E-21 T 23-04-2016 IPR002477 Peptidoglycan binding-like CLI_RS01185 ad527399178139550e0424b846c3c1a5 231 PANTHER PTHR21666 121 229 5.2E-24 T 23-04-2016 CLI_RS01185 ad527399178139550e0424b846c3c1a5 231 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 34 231 8.6E-99 T 23-04-2016 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 CLI_RS07275 b096438cadffae240beed6c9d4665902 602 PIRSF PIRSF018968 1 602 2.4E-62 T 23-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 CLI_RS09730 85d61bebeaf70c295d14295dd1d203a8 157 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 157 37.719 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CLI_RS09730 85d61bebeaf70c295d14295dd1d203a8 157 Pfam PF01625 Peptide methionine sulfoxide reductase 3 153 1.3E-66 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CLI_RS09730 85d61bebeaf70c295d14295dd1d203a8 157 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 152 3.4E-66 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CLI_RS09730 85d61bebeaf70c295d14295dd1d203a8 157 PANTHER PTHR10173:SF6 3 154 2.0E-76 T 23-04-2016 CLI_RS09730 85d61bebeaf70c295d14295dd1d203a8 157 SUPERFAMILY SSF55068 2 155 7.72E-71 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CLI_RS09730 85d61bebeaf70c295d14295dd1d203a8 157 PANTHER PTHR10173 3 154 2.0E-76 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 CLI_RS09730 85d61bebeaf70c295d14295dd1d203a8 157 Gene3D G3DSA:3.30.1060.10 2 153 4.3E-73 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CLI_RS04025 bfe47f6e5078ad534a7e7eecfe8212a3 66 Pfam PF13783 Domain of unknown function (DUF4177) 3 62 4.3E-10 T 23-04-2016 IPR025234 Protein of unknown function DUF4177 CLI_RS04295 672194abec2b0d4bfd2d746f9e3834bc 433 PANTHER PTHR30588:SF0 1 432 1.8E-195 T 23-04-2016 CLI_RS04295 672194abec2b0d4bfd2d746f9e3834bc 433 Pfam PF05525 Branched-chain amino acid transport protein 6 423 6.0E-125 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CLI_RS04295 672194abec2b0d4bfd2d746f9e3834bc 433 PANTHER PTHR30588 1 432 1.8E-195 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CLI_RS04295 672194abec2b0d4bfd2d746f9e3834bc 433 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 412 7.4E-108 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CLI_RS10175 d9f7a484ec87b5d23637a65a309dfd33 263 Gene3D G3DSA:3.40.33.10 135 262 1.3E-16 T 23-04-2016 IPR014044 CAP domain CLI_RS10175 d9f7a484ec87b5d23637a65a309dfd33 263 PANTHER PTHR31157 136 261 3.0E-51 T 23-04-2016 CLI_RS10175 d9f7a484ec87b5d23637a65a309dfd33 263 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 135 260 7.8E-63 T 23-04-2016 IPR014258 CAP domain, YkwD-like CLI_RS10175 d9f7a484ec87b5d23637a65a309dfd33 263 Pfam PF00188 Cysteine-rich secretory protein family 143 258 5.4E-24 T 23-04-2016 IPR014044 CAP domain CLI_RS10175 d9f7a484ec87b5d23637a65a309dfd33 263 SUPERFAMILY SSF55797 136 262 1.96E-29 T 23-04-2016 IPR014044 CAP domain CLI_RS15655 c05a8511048a08113dad40072a7f9a3c 523 Pfam PF16962 Putative ABC exporter 1 521 9.9E-151 T 23-04-2016 IPR031584 Putative ABC exporter CLI_RS10620 3625d9319361741353a6f46fcbb10741 380 Gene3D G3DSA:3.40.50.1970 1 167 1.6E-48 T 23-04-2016 CLI_RS10620 3625d9319361741353a6f46fcbb10741 380 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 156 184 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLI_RS10620 3625d9319361741353a6f46fcbb10741 380 PANTHER PTHR11496 1 380 4.0E-228 T 23-04-2016 CLI_RS10620 3625d9319361741353a6f46fcbb10741 380 Gene3D G3DSA:1.20.1090.10 168 379 3.3E-67 T 23-04-2016 CLI_RS10620 3625d9319361741353a6f46fcbb10741 380 PANTHER PTHR11496:SF71 1 380 4.0E-228 T 23-04-2016 CLI_RS10620 3625d9319361741353a6f46fcbb10741 380 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 371 4.7E-110 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 CLI_RS10620 3625d9319361741353a6f46fcbb10741 380 SUPERFAMILY SSF56796 3 377 1.31E-107 T 23-04-2016 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 PANTHER PTHR10029:SF4 10 211 0.0 T 23-04-2016 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 PANTHER PTHR10029:SF4 246 800 0.0 T 23-04-2016 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 Gene3D G3DSA:3.90.870.10 245 420 2.5E-41 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 SUPERFAMILY SSF55821 247 433 1.62E-43 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 SUPERFAMILY SSF55821 187 199 1.62E-43 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 Gene3D G3DSA:3.30.70.100 11 99 2.4E-24 T 23-04-2016 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 207 789 2.7E-159 T 23-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 Pfam PF01300 Telomere recombination 252 427 1.4E-52 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 Pfam PF00708 Acylphosphatase 13 99 1.0E-20 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 SUPERFAMILY SSF54975 11 99 1.11E-22 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 Pfam PF07503 HypF finger 167 199 1.1E-12 T 23-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 Pfam PF07503 HypF finger 117 150 1.3E-12 T 23-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 ProSitePatterns PS00150 Acylphosphatase signature 1. 19 29 - T 23-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 PIRSF PIRSF006256 10 801 7.0E-268 T 23-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 PANTHER PTHR10029 10 211 0.0 T 23-04-2016 CLI_RS08955 619243b342039aeaf777aa2cd6c44f45 812 PANTHER PTHR10029 246 800 0.0 T 23-04-2016 CLI_RS06355 a9602687c5c016d43478b3506dff12b1 317 PANTHER PTHR30465 1 314 3.2E-152 T 23-04-2016 CLI_RS06355 a9602687c5c016d43478b3506dff12b1 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 313 6.8E-48 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06355 a9602687c5c016d43478b3506dff12b1 317 PANTHER PTHR30465:SF24 1 314 3.2E-152 T 23-04-2016 CLI_RS06355 a9602687c5c016d43478b3506dff12b1 317 Gene3D G3DSA:1.10.3720.10 88 306 1.8E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS06355 a9602687c5c016d43478b3506dff12b1 317 SUPERFAMILY SSF161098 90 301 9.81E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS18375 fdcf3d3d6108c2f9a3269e37f41ee1dc 261 SMART SM00849 11 190 3.1E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS18375 fdcf3d3d6108c2f9a3269e37f41ee1dc 261 SUPERFAMILY SSF56281 2 251 8.38E-44 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS18375 fdcf3d3d6108c2f9a3269e37f41ee1dc 261 Gene3D G3DSA:3.60.15.10 13 243 2.6E-35 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS18375 fdcf3d3d6108c2f9a3269e37f41ee1dc 261 PANTHER PTHR13754:SF15 1 257 1.3E-99 T 23-04-2016 CLI_RS18375 fdcf3d3d6108c2f9a3269e37f41ee1dc 261 Pfam PF12706 Beta-lactamase superfamily domain 23 201 2.1E-21 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS18375 fdcf3d3d6108c2f9a3269e37f41ee1dc 261 PANTHER PTHR13754 1 257 1.3E-99 T 23-04-2016 CLI_RS01840 fb4f623eee1768e0b5f119cae9290f02 299 PANTHER PTHR11228 1 235 1.7E-53 T 23-04-2016 CLI_RS01840 fb4f623eee1768e0b5f119cae9290f02 299 PANTHER PTHR11228:SF26 1 235 1.7E-53 T 23-04-2016 CLI_RS01840 fb4f623eee1768e0b5f119cae9290f02 299 Gene3D G3DSA:3.20.20.70 24 208 1.2E-4 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS01840 fb4f623eee1768e0b5f119cae9290f02 299 SUPERFAMILY SSF102114 25 211 2.09E-9 T 23-04-2016 CLI_RS01840 fb4f623eee1768e0b5f119cae9290f02 299 Pfam PF04055 Radical SAM superfamily 28 192 6.9E-10 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS01840 fb4f623eee1768e0b5f119cae9290f02 299 SMART SM00729 24 244 0.0026 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLI_RS08175 7136780da5d65fcad03c4d9a687f18ee 186 Pfam PF13023 HD domain 13 171 4.0E-40 T 23-04-2016 IPR006674 HD domain CLI_RS08175 7136780da5d65fcad03c4d9a687f18ee 186 SMART SM00471 29 144 2.4E-4 T 23-04-2016 IPR003607 HD/PDEase domain CLI_RS08175 7136780da5d65fcad03c4d9a687f18ee 186 PANTHER PTHR11845 6 184 6.8E-46 T 23-04-2016 CLI_RS08175 7136780da5d65fcad03c4d9a687f18ee 186 SUPERFAMILY SSF109604 4 155 3.43E-38 T 23-04-2016 CLI_RS08175 7136780da5d65fcad03c4d9a687f18ee 186 Gene3D G3DSA:1.10.3210.10 4 180 3.9E-44 T 23-04-2016 IPR006674 HD domain CLI_RS10550 f8ac8fe0db9cb50b9350b2594ff7f118 100 SMART SM00877 33 100 5.4E-7 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS10550 f8ac8fe0db9cb50b9350b2594ff7f118 100 Pfam PF00936 BMC domain 34 92 2.5E-6 T 23-04-2016 IPR000249 Microcompartment protein, bacteria CLI_RS10550 f8ac8fe0db9cb50b9350b2594ff7f118 100 SUPERFAMILY SSF143414 33 97 1.96E-9 T 23-04-2016 CLI_RS14900 25fce78a41c1266ab80b886b387a6320 372 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 16 368 2.3E-114 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CLI_RS14900 25fce78a41c1266ab80b886b387a6320 372 Pfam PF01098 Cell cycle protein 20 368 9.7E-97 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CLI_RS14900 25fce78a41c1266ab80b886b387a6320 372 PANTHER PTHR30474:SF1 5 372 3.4E-146 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CLI_RS14900 25fce78a41c1266ab80b886b387a6320 372 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 325 349 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CLI_RS14900 25fce78a41c1266ab80b886b387a6320 372 PANTHER PTHR30474 5 372 3.4E-146 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CLI_RS09560 ba3ec3a5dc47c07ad6b3c617f5469c45 196 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 14 193 5.4E-39 T 23-04-2016 IPR014245 Sporulation stage III, protein AF CLI_RS09560 ba3ec3a5dc47c07ad6b3c617f5469c45 196 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 3 108 3.3E-38 T 23-04-2016 IPR014245 Sporulation stage III, protein AF CLI_RS10705 e08c917ba40338f3eb7c4726eb6fa95a 291 Pfam PF00005 ABC transporter 23 164 9.2E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS10705 e08c917ba40338f3eb7c4726eb6fa95a 291 SMART SM00382 32 214 9.2E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS10705 e08c917ba40338f3eb7c4726eb6fa95a 291 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS10705 e08c917ba40338f3eb7c4726eb6fa95a 291 PANTHER PTHR24220:SF331 4 230 5.6E-127 T 23-04-2016 CLI_RS10705 e08c917ba40338f3eb7c4726eb6fa95a 291 PANTHER PTHR24220 4 230 5.6E-127 T 23-04-2016 CLI_RS10705 e08c917ba40338f3eb7c4726eb6fa95a 291 SUPERFAMILY SSF52540 3 224 8.8E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10705 e08c917ba40338f3eb7c4726eb6fa95a 291 Gene3D G3DSA:3.40.50.300 2 225 6.3E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00090 6d82bee6ed3fc21dd4ff4292a66801d4 258 SUPERFAMILY SSF141523 133 256 1.07E-24 T 23-04-2016 CLI_RS00090 6d82bee6ed3fc21dd4ff4292a66801d4 258 PANTHER PTHR30582 41 258 3.5E-125 T 23-04-2016 CLI_RS00090 6d82bee6ed3fc21dd4ff4292a66801d4 258 Pfam PF03734 L,D-transpeptidase catalytic domain 135 256 2.6E-19 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 CLI_RS00090 6d82bee6ed3fc21dd4ff4292a66801d4 258 PANTHER PTHR30582:SF11 41 258 3.5E-125 T 23-04-2016 CLI_RS00090 6d82bee6ed3fc21dd4ff4292a66801d4 258 Gene3D G3DSA:2.40.440.10 128 256 6.7E-24 T 23-04-2016 CLI_RS03635 36f80c5f88ebf36effcb388a62fe7970 422 PANTHER PTHR33712:SF2 1 422 4.5E-168 T 23-04-2016 CLI_RS03635 36f80c5f88ebf36effcb388a62fe7970 422 SUPERFAMILY SSF53807 15 412 1.83E-58 T 23-04-2016 CLI_RS03635 36f80c5f88ebf36effcb388a62fe7970 422 Gene3D G3DSA:3.40.50.1980 32 162 7.4E-22 T 23-04-2016 CLI_RS03635 36f80c5f88ebf36effcb388a62fe7970 422 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 32 413 4.2E-62 T 23-04-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CLI_RS03635 36f80c5f88ebf36effcb388a62fe7970 422 PANTHER PTHR33712 1 422 4.5E-168 T 23-04-2016 CLI_RS03635 36f80c5f88ebf36effcb388a62fe7970 422 Gene3D G3DSA:3.40.50.1980 167 271 1.1E-6 T 23-04-2016 CLI_RS12960 49bf833cba3742ee72e733b00044f927 338 Gene3D G3DSA:3.40.50.620 55 179 6.5E-13 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS12960 49bf833cba3742ee72e733b00044f927 338 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 70 133 4.4E-6 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 CLI_RS12960 49bf833cba3742ee72e733b00044f927 338 SUPERFAMILY SSF52402 234 273 2.21E-21 T 23-04-2016 CLI_RS12960 49bf833cba3742ee72e733b00044f927 338 SUPERFAMILY SSF52402 54 191 2.21E-21 T 23-04-2016 CLI_RS09570 776f6aacd4aee2be22f176f79514ac63 127 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 27 127 8.6E-40 T 23-04-2016 IPR014211 Stage III sporulation protein AD CLI_RS09570 776f6aacd4aee2be22f176f79514ac63 127 Pfam PF06686 Stage III sporulation protein AC/AD protein family 71 125 1.1E-19 T 23-04-2016 IPR025664 Stage III sporulation protein AC/AD family CLI_RS09570 776f6aacd4aee2be22f176f79514ac63 127 Pfam PF06686 Stage III sporulation protein AC/AD protein family 3 57 7.3E-12 T 23-04-2016 IPR025664 Stage III sporulation protein AC/AD family CLI_RS02155 e94dc5d274bc7ccd4db8ab135910a2c4 156 Gene3D G3DSA:3.40.50.1000 13 145 2.1E-12 T 23-04-2016 IPR023214 HAD-like domain CLI_RS02155 e94dc5d274bc7ccd4db8ab135910a2c4 156 Pfam PF08282 haloacid dehalogenase-like hydrolase 34 116 3.8E-6 T 23-04-2016 IPR023214 HAD-like domain CLI_RS02155 e94dc5d274bc7ccd4db8ab135910a2c4 156 SUPERFAMILY SSF56784 13 119 3.8E-14 T 23-04-2016 IPR023214 HAD-like domain CLI_RS04260 3783ef7e68b2d03ca6d698d6f5900d1d 140 PANTHER PTHR36437 1 131 4.1E-62 T 23-04-2016 CLI_RS04260 3783ef7e68b2d03ca6d698d6f5900d1d 140 PANTHER PTHR36437:SF2 1 131 4.1E-62 T 23-04-2016 CLI_RS04260 3783ef7e68b2d03ca6d698d6f5900d1d 140 SUPERFAMILY SSF54593 1 132 6.98E-30 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS04260 3783ef7e68b2d03ca6d698d6f5900d1d 140 Gene3D G3DSA:3.10.180.10 7 128 1.2E-23 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS04260 3783ef7e68b2d03ca6d698d6f5900d1d 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 125 1.2E-16 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLI_RS01635 09b807465e60f27014869abafa187466 178 PANTHER PTHR41386 1 175 2.5E-63 T 23-04-2016 CLI_RS01635 09b807465e60f27014869abafa187466 178 Pfam PF06210 Protein of unknown function (DUF1003) 63 163 3.7E-37 T 23-04-2016 IPR010406 Protein of unknown function DUF1003 CLI_RS01635 09b807465e60f27014869abafa187466 178 PANTHER PTHR41386:SF1 1 175 2.5E-63 T 23-04-2016 CLI_RS10765 e8cedb855324f64c627065b37a88e1d4 454 PANTHER PTHR33843:SF4 1 454 1.6E-257 T 23-04-2016 CLI_RS10765 e8cedb855324f64c627065b37a88e1d4 454 PANTHER PTHR33843 1 454 1.6E-257 T 23-04-2016 CLI_RS10765 e8cedb855324f64c627065b37a88e1d4 454 Pfam PF03611 PTS system sugar-specific permease component 11 405 2.8E-134 T 23-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CLI_RS02770 30f440883906889a5db4ae68a96ba275 264 Gene3D G3DSA:3.40.50.2300 8 134 8.7E-34 T 23-04-2016 CLI_RS02770 30f440883906889a5db4ae68a96ba275 264 SUPERFAMILY SSF52172 8 136 5.55E-33 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS02770 30f440883906889a5db4ae68a96ba275 264 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 150 258 4.3E-22 T 23-04-2016 IPR018745 Domain of unknown function DUF2294 CLI_RS02770 30f440883906889a5db4ae68a96ba275 264 Pfam PF00072 Response regulator receiver domain 13 123 8.0E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS02770 30f440883906889a5db4ae68a96ba275 264 SMART SM00448 11 122 4.3E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS02770 30f440883906889a5db4ae68a96ba275 264 PANTHER PTHR26402 11 128 5.1E-32 T 23-04-2016 CLI_RS06070 41178b823816e7c884d601fa00814364 307 Pfam PF04227 Indigoidine synthase A like protein 11 301 2.0E-139 T 23-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CLI_RS06070 41178b823816e7c884d601fa00814364 307 SUPERFAMILY SSF110581 4 303 1.14E-119 T 23-04-2016 CLI_RS06070 41178b823816e7c884d601fa00814364 307 PANTHER PTHR10584:SF201 6 216 1.2E-93 T 23-04-2016 CLI_RS06070 41178b823816e7c884d601fa00814364 307 PANTHER PTHR10584 6 216 1.2E-93 T 23-04-2016 CLI_RS06070 41178b823816e7c884d601fa00814364 307 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 10 304 44.772 T 23-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CLI_RS16110 1aed907c93f53cdd446c82b980b8fcc5 252 Pfam PF10543 ORF6N domain 19 102 3.5E-20 T 23-04-2016 IPR018873 KilA-N, DNA-binding domain CLI_RS16110 1aed907c93f53cdd446c82b980b8fcc5 252 Pfam PF10552 ORF6C domain 135 243 1.5E-34 T 23-04-2016 IPR018878 ORF6C domain CLI_RS10580 c9338627180963c8f987452ededfde7d 846 Pfam PF02901 Pyruvate formate lyase-like 58 707 3.2E-232 T 23-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 CLI_RS10580 c9338627180963c8f987452ededfde7d 846 PANTHER PTHR30191 1 846 0.0 T 23-04-2016 CLI_RS10580 c9338627180963c8f987452ededfde7d 846 TIGRFAM TIGR04394 choline_CutC: choline trimethylamine-lyase 58 846 0.0 T 23-04-2016 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167|UniPathway: UPA00117 CLI_RS10580 c9338627180963c8f987452ededfde7d 846 Gene3D G3DSA:3.20.70.20 38 844 1.2E-254 T 23-04-2016 CLI_RS10580 c9338627180963c8f987452ededfde7d 846 SUPERFAMILY SSF51998 58 843 6.1E-235 T 23-04-2016 CLI_RS10580 c9338627180963c8f987452ededfde7d 846 ProSitePatterns PS00850 Glycine radical domain signature. 816 824 - T 23-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CLI_RS10580 c9338627180963c8f987452ededfde7d 846 PANTHER PTHR30191:SF6 1 846 0.0 T 23-04-2016 CLI_RS10580 c9338627180963c8f987452ededfde7d 846 Pfam PF01228 Glycine radical 724 827 8.8E-26 T 23-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CLI_RS06960 feea73dff1f646a634267a871d31b0c5 221 PANTHER PTHR24220:SF587 5 202 7.9E-77 T 23-04-2016 CLI_RS06960 feea73dff1f646a634267a871d31b0c5 221 Gene3D G3DSA:3.40.50.300 2 219 6.9E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06960 feea73dff1f646a634267a871d31b0c5 221 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS06960 feea73dff1f646a634267a871d31b0c5 221 Pfam PF00005 ABC transporter 21 167 4.4E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS06960 feea73dff1f646a634267a871d31b0c5 221 SMART SM00382 30 216 1.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06960 feea73dff1f646a634267a871d31b0c5 221 SUPERFAMILY SSF52540 3 219 4.94E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06960 feea73dff1f646a634267a871d31b0c5 221 PANTHER PTHR24220 5 202 7.9E-77 T 23-04-2016 CLI_RS13530 bc320ad72a604312717697df2224b604 221 SUPERFAMILY SSF102588 1 218 2.09E-38 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain CLI_RS13530 bc320ad72a604312717697df2224b604 221 Gene3D G3DSA:3.40.50.10320 2 219 1.0E-45 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain CLI_RS13530 bc320ad72a604312717697df2224b604 221 Pfam PF02585 GlcNAc-PI de-N-acetylase 4 123 1.5E-18 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related CLI_RS09885 6e05b6b120bb31198580518c3e0d9c7b 585 PANTHER PTHR24221 1 583 0.0 T 23-04-2016 CLI_RS09885 6e05b6b120bb31198580518c3e0d9c7b 585 Gene3D G3DSA:1.20.1560.10 9 328 9.7E-76 T 23-04-2016 CLI_RS09885 6e05b6b120bb31198580518c3e0d9c7b 585 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS09885 6e05b6b120bb31198580518c3e0d9c7b 585 SUPERFAMILY SSF52540 340 581 1.01E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09885 6e05b6b120bb31198580518c3e0d9c7b 585 Pfam PF00664 ABC transporter transmembrane region 22 299 1.8E-47 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS09885 6e05b6b120bb31198580518c3e0d9c7b 585 Pfam PF00005 ABC transporter 361 510 7.0E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS09885 6e05b6b120bb31198580518c3e0d9c7b 585 SUPERFAMILY SSF90123 2 328 2.49E-76 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLI_RS09885 6e05b6b120bb31198580518c3e0d9c7b 585 PANTHER PTHR24221:SF271 1 583 0.0 T 23-04-2016 CLI_RS09885 6e05b6b120bb31198580518c3e0d9c7b 585 Gene3D G3DSA:3.40.50.300 345 574 1.9E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09885 6e05b6b120bb31198580518c3e0d9c7b 585 SMART SM00382 370 556 2.4E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS10210 75d9df7d5bb532b09eb7fb8c52edc732 426 Gene3D G3DSA:3.40.50.150 283 355 2.1E-4 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS10210 75d9df7d5bb532b09eb7fb8c52edc732 426 PANTHER PTHR33171:SF3 1 426 2.3E-119 T 23-04-2016 CLI_RS10210 75d9df7d5bb532b09eb7fb8c52edc732 426 PANTHER PTHR33171 1 426 2.3E-119 T 23-04-2016 CLI_RS10210 75d9df7d5bb532b09eb7fb8c52edc732 426 Pfam PF09861 Domain of unknown function (DUF2088) 8 209 3.2E-73 T 23-04-2016 IPR018657 Domain of unknown function DUF2088 CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 Gene3D G3DSA:3.40.50.720 46 291 4.0E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 185 213 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 59 289 1.9E-59 T 23-04-2016 CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PANTHER PTHR24322:SF105 54 182 5.2E-73 T 23-04-2016 CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PANTHER PTHR24322:SF105 198 230 5.2E-73 T 23-04-2016 CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 188 1.5E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 217 1.5E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 137 1.5E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 236 1.5E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 51 68 1.5E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 253 273 1.5E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 137 2.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 178 186 2.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 198 217 2.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PANTHER PTHR24322 54 182 5.2E-73 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 PANTHER PTHR24322 198 230 5.2E-73 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS08510 9506adb6c6373ca1a51d81a6c3fb061e 294 SUPERFAMILY SSF51735 49 291 2.32E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS16235 c9ecc90ecdc7aae3757e1f6d2a546996 358 Gene3D G3DSA:2.40.420.10 15 105 2.1E-28 T 23-04-2016 CLI_RS16235 c9ecc90ecdc7aae3757e1f6d2a546996 358 Gene3D G3DSA:3.40.50.10690 114 357 1.8E-100 T 23-04-2016 CLI_RS02185 c83dde6111b11bef5cba8b5e52390630 183 Pfam PF02659 Putative manganese efflux pump 31 181 2.5E-31 T 23-04-2016 IPR003810 Putative manganese efflux pump CLI_RS02185 c83dde6111b11bef5cba8b5e52390630 183 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 183 19.255 T 23-04-2016 IPR022929 Putative manganese efflux pump MntP CLI_RS02185 c83dde6111b11bef5cba8b5e52390630 183 PANTHER PTHR35529 2 182 9.4E-61 T 23-04-2016 CLI_RS06205 b8017eb3025b75f50b08ed9e6ca2519f 491 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 12 461 1.1E-120 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 CLI_RS06205 b8017eb3025b75f50b08ed9e6ca2519f 491 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 10 477 44.739 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 CLI_RS06205 b8017eb3025b75f50b08ed9e6ca2519f 491 PANTHER PTHR32057 4 481 6.9E-183 T 23-04-2016 CLI_RS01235 cd542cf290b002283086c9a2273434c5 386 Pfam PF04294 VanW like protein 255 384 9.2E-50 T 23-04-2016 IPR007391 Vancomycin resistance VanW CLI_RS01235 cd542cf290b002283086c9a2273434c5 386 PANTHER PTHR35788 9 385 5.8E-137 T 23-04-2016 CLI_RS01235 cd542cf290b002283086c9a2273434c5 386 Pfam PF12229 Putative peptidoglycan binding domain 102 216 5.4E-19 T 23-04-2016 IPR022029 Putative peptidoglycan binding domain CLI_RS01235 cd542cf290b002283086c9a2273434c5 386 PANTHER PTHR35788:SF1 9 385 5.8E-137 T 23-04-2016 CLI_RS11965 e79c518402d16124a6fde21497c0fccb 118 Pfam PF00892 EamA-like transporter family 49 116 1.2E-10 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CLI_RS11965 e79c518402d16124a6fde21497c0fccb 118 PANTHER PTHR30561 42 118 2.3E-26 T 23-04-2016 CLI_RS11965 e79c518402d16124a6fde21497c0fccb 118 SUPERFAMILY SSF103481 41 117 9.81E-15 T 23-04-2016 CLI_RS11965 e79c518402d16124a6fde21497c0fccb 118 PANTHER PTHR30561:SF9 42 118 2.3E-26 T 23-04-2016 CLI_RS04425 010f36a9776850b00544de183d32f09e 184 SMART SM00903 11 145 8.2E-8 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 CLI_RS04425 010f36a9776850b00544de183d32f09e 184 PANTHER PTHR30466:SF6 13 184 7.6E-52 T 23-04-2016 CLI_RS04425 010f36a9776850b00544de183d32f09e 184 SUPERFAMILY SSF50475 9 169 5.4E-32 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS04425 010f36a9776850b00544de183d32f09e 184 PANTHER PTHR30466 13 184 7.6E-52 T 23-04-2016 CLI_RS04425 010f36a9776850b00544de183d32f09e 184 Gene3D G3DSA:2.30.110.10 11 172 3.9E-38 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CLI_RS04425 010f36a9776850b00544de183d32f09e 184 Pfam PF01613 Flavin reductase like domain 15 166 1.6E-16 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 CLI_RS00415 07241c1b712229488cbc418963d59950 314 SUPERFAMILY SSF52540 19 174 4.42E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00415 07241c1b712229488cbc418963d59950 314 PANTHER PTHR11669 6 194 1.4E-56 T 23-04-2016 CLI_RS00415 07241c1b712229488cbc418963d59950 314 Pfam PF13177 DNA polymerase III, delta subunit 9 152 1.8E-33 T 23-04-2016 CLI_RS00415 07241c1b712229488cbc418963d59950 314 PANTHER PTHR11669:SF8 6 194 1.4E-56 T 23-04-2016 CLI_RS00415 07241c1b712229488cbc418963d59950 314 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 233 312 5.5E-6 T 23-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS00415 07241c1b712229488cbc418963d59950 314 Gene3D G3DSA:3.40.50.300 5 150 1.8E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PANTHER PTHR11206 67 83 2.0E-71 T 23-04-2016 CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PANTHER PTHR11206 216 441 2.0E-71 T 23-04-2016 CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PANTHER PTHR11206 501 513 2.0E-71 T 23-04-2016 CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PRINTS PR01806 Virulence factor MviN signature 158 179 7.2E-16 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PRINTS PR01806 Virulence factor MviN signature 258 284 7.2E-16 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PRINTS PR01806 Virulence factor MviN signature 134 158 7.2E-16 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PRINTS PR01806 Virulence factor MviN signature 356 375 7.2E-16 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PRINTS PR01806 Virulence factor MviN signature 36 55 7.2E-16 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PRINTS PR01806 Virulence factor MviN signature 408 425 7.2E-16 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PIRSF PIRSF002869 1 512 2.0E-123 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 Pfam PF03023 MviN-like protein 31 466 1.8E-91 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PANTHER PTHR11206:SF90 67 83 2.0E-71 T 23-04-2016 CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PANTHER PTHR11206:SF90 216 441 2.0E-71 T 23-04-2016 CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 PANTHER PTHR11206:SF90 501 513 2.0E-71 T 23-04-2016 CLI_RS15420 a85c1eae82062f71c0d537cc4212a280 518 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 6 507 3.7E-106 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CLI_RS13005 f173660585dbf0c10a8c4b039d29a0bb 274 Gene3D G3DSA:3.40.50.1000 187 274 7.5E-52 T 23-04-2016 IPR023214 HAD-like domain CLI_RS13005 f173660585dbf0c10a8c4b039d29a0bb 274 Gene3D G3DSA:3.40.50.1000 2 73 7.5E-52 T 23-04-2016 IPR023214 HAD-like domain CLI_RS13005 f173660585dbf0c10a8c4b039d29a0bb 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 269 3.6E-62 T 23-04-2016 IPR023214 HAD-like domain CLI_RS13005 f173660585dbf0c10a8c4b039d29a0bb 274 Gene3D G3DSA:3.30.1240.10 84 186 2.1E-9 T 23-04-2016 CLI_RS13005 f173660585dbf0c10a8c4b039d29a0bb 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 23-04-2016 IPR000150 Cof protein GO:0016787 CLI_RS13005 f173660585dbf0c10a8c4b039d29a0bb 274 PANTHER PTHR10000 2 274 1.0E-107 T 23-04-2016 CLI_RS13005 f173660585dbf0c10a8c4b039d29a0bb 274 PANTHER PTHR10000:SF16 2 274 1.0E-107 T 23-04-2016 CLI_RS13005 f173660585dbf0c10a8c4b039d29a0bb 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 241 1.3E-26 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 CLI_RS13005 f173660585dbf0c10a8c4b039d29a0bb 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 269 4.0E-60 T 23-04-2016 IPR000150 Cof protein GO:0016787 CLI_RS13005 f173660585dbf0c10a8c4b039d29a0bb 274 SUPERFAMILY SSF56784 2 273 1.85E-66 T 23-04-2016 IPR023214 HAD-like domain CLI_RS03245 fbe7daedc43a48608d45bafeb077a95e 303 PANTHER PTHR39430 4 297 1.0E-18 T 23-04-2016 CLI_RS03245 fbe7daedc43a48608d45bafeb077a95e 303 Pfam PF02517 CAAX protease self-immunity 150 243 4.5E-9 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 CLI_RS09975 dea73127a01daa7d2cd06d82da7e913c 251 Pfam PF02361 Cobalt transport protein 10 210 1.0E-19 T 23-04-2016 IPR003339 ABC/ECF transporter, transmembrane component CLI_RS09975 dea73127a01daa7d2cd06d82da7e913c 251 PANTHER PTHR33514:SF4 3 243 9.5E-60 T 23-04-2016 CLI_RS09975 dea73127a01daa7d2cd06d82da7e913c 251 PANTHER PTHR33514 3 243 9.5E-60 T 23-04-2016 CLI_RS07700 635a2b8b3a4e8efbca42c4c97ff88f82 340 TIGRFAM TIGR01463 mtaA_cmuA: methyltransferase, MtaA/CmuA family 2 336 6.8E-76 T 23-04-2016 IPR006360 Methyltransferase MtaA/CmuA GO:0006730|GO:0008168 CLI_RS07700 635a2b8b3a4e8efbca42c4c97ff88f82 340 PANTHER PTHR21091 28 336 1.8E-62 T 23-04-2016 CLI_RS07700 635a2b8b3a4e8efbca42c4c97ff88f82 340 Gene3D G3DSA:3.20.20.210 2 336 9.4E-63 T 23-04-2016 CLI_RS07700 635a2b8b3a4e8efbca42c4c97ff88f82 340 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 336 8.2E-81 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CLI_RS07700 635a2b8b3a4e8efbca42c4c97ff88f82 340 PANTHER PTHR21091:SF117 28 336 1.8E-62 T 23-04-2016 CLI_RS07700 635a2b8b3a4e8efbca42c4c97ff88f82 340 SUPERFAMILY SSF51726 1 338 8.63E-66 T 23-04-2016 CLI_RS05200 fa947af57a85b21309dbfc0a2d1f4736 251 Pfam PF13803 Domain of unknown function (DUF4184) 1 248 2.5E-77 T 23-04-2016 IPR025238 Protein of unknown function DUF4184 CLI_RS11745 ead7b1d4b5ee8c9fd28f0545fb48c6d2 253 Pfam PF09851 Short C-terminal domain 224 251 3.6E-7 T 23-04-2016 IPR018649 SHOCT domain CLI_RS12335 6cb8fc9920732ae5768a5cd6717df158 358 Gene3D G3DSA:3.40.50.10690 114 357 1.8E-100 T 23-04-2016 CLI_RS12335 6cb8fc9920732ae5768a5cd6717df158 358 Gene3D G3DSA:2.40.420.10 15 105 5.1E-28 T 23-04-2016 CLI_RS01920 b7a015bc1591518d06da4c262f7d1baa 468 PANTHER PTHR11785 1 468 3.4E-124 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS01920 b7a015bc1591518d06da4c262f7d1baa 468 PIRSF PIRSF006060 1 468 3.9E-68 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS01920 b7a015bc1591518d06da4c262f7d1baa 468 PANTHER PTHR11785:SF322 1 468 3.4E-124 T 23-04-2016 CLI_RS01920 b7a015bc1591518d06da4c262f7d1baa 468 Pfam PF13520 Amino acid permease 5 441 6.8E-63 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS10780 5663b0c7e4cc5e4592ff3ecf7b2ebdbd 238 TIGRFAM TIGR02134 transald_staph: transaldolase 5 238 2.7E-115 T 23-04-2016 IPR011861 Transaldolase, Staphylococcus-type CLI_RS10780 5663b0c7e4cc5e4592ff3ecf7b2ebdbd 238 Gene3D G3DSA:3.20.20.70 9 215 4.2E-39 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS10780 5663b0c7e4cc5e4592ff3ecf7b2ebdbd 238 PANTHER PTHR10683 6 238 3.6E-127 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CLI_RS10780 5663b0c7e4cc5e4592ff3ecf7b2ebdbd 238 SUPERFAMILY SSF51569 9 236 2.08E-51 T 23-04-2016 CLI_RS10780 5663b0c7e4cc5e4592ff3ecf7b2ebdbd 238 PANTHER PTHR10683:SF13 6 238 3.6E-127 T 23-04-2016 CLI_RS10780 5663b0c7e4cc5e4592ff3ecf7b2ebdbd 238 Pfam PF00923 Transaldolase 10 217 3.1E-41 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CLI_RS01960 d26a655e030cc4caa77c6245d8acae1d 270 SUPERFAMILY SSF88713 50 267 4.2E-51 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLI_RS01960 d26a655e030cc4caa77c6245d8acae1d 270 Gene3D G3DSA:3.20.20.370 69 269 1.2E-56 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS01960 d26a655e030cc4caa77c6245d8acae1d 270 Gene3D G3DSA:3.20.20.370 7 36 1.2E-56 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS01960 d26a655e030cc4caa77c6245d8acae1d 270 PANTHER PTHR10587 70 269 2.9E-47 T 23-04-2016 CLI_RS01960 d26a655e030cc4caa77c6245d8acae1d 270 PANTHER PTHR10587:SF15 70 269 2.9E-47 T 23-04-2016 CLI_RS01960 d26a655e030cc4caa77c6245d8acae1d 270 Pfam PF01522 Polysaccharide deacetylase 75 187 2.0E-28 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS03900 518118f397a336cfc265fef7e565fa8b 302 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 291 1.7E-69 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS03900 518118f397a336cfc265fef7e565fa8b 302 Gene3D G3DSA:3.40.50.1100 43 144 1.2E-36 T 23-04-2016 CLI_RS03900 518118f397a336cfc265fef7e565fa8b 302 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 302 6.1E-108 T 23-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CLI_RS03900 518118f397a336cfc265fef7e565fa8b 302 PANTHER PTHR10314:SF8 2 299 7.4E-131 T 23-04-2016 CLI_RS03900 518118f397a336cfc265fef7e565fa8b 302 PANTHER PTHR10314 2 299 7.4E-131 T 23-04-2016 CLI_RS03900 518118f397a336cfc265fef7e565fa8b 302 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CLI_RS03900 518118f397a336cfc265fef7e565fa8b 302 Gene3D G3DSA:3.40.50.1100 2 42 4.4E-76 T 23-04-2016 CLI_RS03900 518118f397a336cfc265fef7e565fa8b 302 Gene3D G3DSA:3.40.50.1100 150 301 4.4E-76 T 23-04-2016 CLI_RS03900 518118f397a336cfc265fef7e565fa8b 302 SUPERFAMILY SSF53686 1 299 5.11E-96 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS03900 518118f397a336cfc265fef7e565fa8b 302 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 302 7.9E-110 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CLI_RS11890 8ae38a064daca059a4cf7470adaec588 184 Pfam PF10991 Protein of unknown function (DUF2815) 10 176 2.4E-71 T 23-04-2016 IPR022595 Protein of unknown function DUF2815 CLI_RS11890 8ae38a064daca059a4cf7470adaec588 184 SUPERFAMILY SSF50249 8 174 5.82E-46 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS11890 8ae38a064daca059a4cf7470adaec588 184 Gene3D G3DSA:2.40.50.140 10 173 1.8E-4 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS07680 39353362e95eea1efa3932d0ca807fb1 576 Gene3D G3DSA:3.10.20.30 3 86 4.4E-15 T 23-04-2016 IPR012675 Beta-grasp domain CLI_RS07680 39353362e95eea1efa3932d0ca807fb1 576 Pfam PF14574 Domain of unknown function (DUF4445) 176 574 1.9E-140 T 23-04-2016 IPR027980 Protein of unknown function DUF4445 CLI_RS07680 39353362e95eea1efa3932d0ca807fb1 576 SUPERFAMILY SSF54292 2 87 1.26E-16 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLI_RS07680 39353362e95eea1efa3932d0ca807fb1 576 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 77 1.2E-7 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLI_RS02560 6f5d57be043bff2d96a50d298386ba91 483 Gene3D G3DSA:3.90.1150.10 362 477 3.9E-6 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS02560 6f5d57be043bff2d96a50d298386ba91 483 Gene3D G3DSA:3.40.640.10 147 361 8.4E-69 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS02560 6f5d57be043bff2d96a50d298386ba91 483 PANTHER PTHR11751:SF301 93 477 3.4E-141 T 23-04-2016 CLI_RS02560 6f5d57be043bff2d96a50d298386ba91 483 Pfam PF00155 Aminotransferase class I and II 132 467 6.8E-33 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS02560 6f5d57be043bff2d96a50d298386ba91 483 Gene3D G3DSA:1.10.10.10 4 77 1.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02560 6f5d57be043bff2d96a50d298386ba91 483 SMART SM00345 17 76 1.4E-12 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS02560 6f5d57be043bff2d96a50d298386ba91 483 PANTHER PTHR11751 93 477 3.4E-141 T 23-04-2016 CLI_RS02560 6f5d57be043bff2d96a50d298386ba91 483 SUPERFAMILY SSF53383 88 480 4.12E-86 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS02560 6f5d57be043bff2d96a50d298386ba91 483 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 5.31E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS02560 6f5d57be043bff2d96a50d298386ba91 483 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 5.31E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS02560 6f5d57be043bff2d96a50d298386ba91 483 SUPERFAMILY SSF46785 7 84 8.3E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02560 6f5d57be043bff2d96a50d298386ba91 483 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 8.9E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS00485 f831dbc0722637ce7ed15481a4df4e0b 191 Pfam PF07670 Nucleoside recognition 42 150 2.9E-12 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CLI_RS00485 f831dbc0722637ce7ed15481a4df4e0b 191 PANTHER PTHR35793:SF1 2 190 4.8E-114 T 23-04-2016 CLI_RS00485 f831dbc0722637ce7ed15481a4df4e0b 191 PANTHER PTHR35793 2 190 4.8E-114 T 23-04-2016 CLI_RS15495 9047261eb25f025e40e0feabd7aca2af 962 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 85 215 2.5E-12 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CLI_RS15495 9047261eb25f025e40e0feabd7aca2af 962 Pfam PF07495 Y_Y_Y domain 685 739 1.6E-8 T 23-04-2016 IPR011123 Two component regulator three Y CLI_RS15495 9047261eb25f025e40e0feabd7aca2af 962 Pfam PF07495 Y_Y_Y domain 580 643 9.3E-8 T 23-04-2016 IPR011123 Two component regulator three Y CLI_RS15495 9047261eb25f025e40e0feabd7aca2af 962 Pfam PF07495 Y_Y_Y domain 370 431 1.0E-7 T 23-04-2016 IPR011123 Two component regulator three Y CLI_RS15495 9047261eb25f025e40e0feabd7aca2af 962 Pfam PF07495 Y_Y_Y domain 474 539 3.4E-9 T 23-04-2016 IPR011123 Two component regulator three Y CLI_RS15495 9047261eb25f025e40e0feabd7aca2af 962 Pfam PF07495 Y_Y_Y domain 266 330 3.1E-9 T 23-04-2016 IPR011123 Two component regulator three Y CLI_RS15495 9047261eb25f025e40e0feabd7aca2af 962 Gene3D G3DSA:3.40.630.40 753 961 3.8E-48 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS15495 9047261eb25f025e40e0feabd7aca2af 962 SUPERFAMILY SSF53187 753 960 2.89E-45 T 23-04-2016 CLI_RS15495 9047261eb25f025e40e0feabd7aca2af 962 PANTHER PTHR30404:SF0 495 961 1.2E-176 T 23-04-2016 CLI_RS15495 9047261eb25f025e40e0feabd7aca2af 962 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 755 957 7.8E-46 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS15495 9047261eb25f025e40e0feabd7aca2af 962 SMART SM00646 824 957 5.3E-27 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CLI_RS15495 9047261eb25f025e40e0feabd7aca2af 962 PANTHER PTHR30404 495 961 1.2E-176 T 23-04-2016 CLI_RS02060 e725861a44bc918b0b573294cdd480dd 200 PANTHER PTHR30586 1 200 2.5E-112 T 23-04-2016 CLI_RS02060 e725861a44bc918b0b573294cdd480dd 200 PIRSF PIRSF006102 1 200 2.1E-75 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CLI_RS02060 e725861a44bc918b0b573294cdd480dd 200 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 198 26.576 T 23-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CLI_RS02060 e725861a44bc918b0b573294cdd480dd 200 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 188 7.7E-68 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CLI_RS02060 e725861a44bc918b0b573294cdd480dd 200 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 8 195 2.4E-82 T 23-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CLI_RS01240 9cd4987ab777125f94d03a4147848188 450 Pfam PF04294 VanW like protein 236 365 4.4E-49 T 23-04-2016 IPR007391 Vancomycin resistance VanW CLI_RS01240 9cd4987ab777125f94d03a4147848188 450 Pfam PF12229 Putative peptidoglycan binding domain 84 192 4.3E-22 T 23-04-2016 IPR022029 Putative peptidoglycan binding domain CLI_RS01240 9cd4987ab777125f94d03a4147848188 450 Pfam PF07501 G5 domain 382 449 2.0E-14 T 23-04-2016 IPR011098 G5 domain CLI_RS01240 9cd4987ab777125f94d03a4147848188 450 PANTHER PTHR35788:SF1 5 450 2.1E-169 T 23-04-2016 CLI_RS01240 9cd4987ab777125f94d03a4147848188 450 SMART SM01208 373 450 8.6E-19 T 23-04-2016 IPR011098 G5 domain CLI_RS01240 9cd4987ab777125f94d03a4147848188 450 PANTHER PTHR35788 5 450 2.1E-169 T 23-04-2016 CLI_RS12490 e777cf54a2f4764225c2f607192002ea 116 PANTHER PTHR34297 1 116 2.8E-52 T 23-04-2016 CLI_RS12490 e777cf54a2f4764225c2f607192002ea 116 PANTHER PTHR34297:SF2 1 116 2.8E-52 T 23-04-2016 CLI_RS12490 e777cf54a2f4764225c2f607192002ea 116 Pfam PF03780 Asp23 family, cell envelope-related function 9 115 6.0E-34 T 23-04-2016 IPR005531 Alkaline shock protein Asp23 CLI_RS09795 80c484e768c649285e97d40c71a6669e 75 SUPERFAMILY SSF54285 2 75 2.04E-14 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLI_RS09795 80c484e768c649285e97d40c71a6669e 75 PANTHER PTHR38031 2 75 1.0E-21 T 23-04-2016 CLI_RS09795 80c484e768c649285e97d40c71a6669e 75 Pfam PF02597 ThiS family 5 75 5.6E-10 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CLI_RS09795 80c484e768c649285e97d40c71a6669e 75 Gene3D G3DSA:3.10.20.30 2 75 1.0E-17 T 23-04-2016 IPR012675 Beta-grasp domain CLI_RS00020 fd4c164ac9e03443d8e0e1949e2702ba 68 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 3 62 5.9E-26 T 23-04-2016 IPR014330 RNA-binding S4-related,YaaA CLI_RS00020 fd4c164ac9e03443d8e0e1949e2702ba 68 Gene3D G3DSA:3.10.290.10 1 67 3.6E-26 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CLI_RS00020 fd4c164ac9e03443d8e0e1949e2702ba 68 PANTHER PTHR32319 5 68 1.2E-26 T 23-04-2016 CLI_RS00020 fd4c164ac9e03443d8e0e1949e2702ba 68 Pfam PF13275 S4 domain 4 67 4.1E-25 T 23-04-2016 CLI_RS00020 fd4c164ac9e03443d8e0e1949e2702ba 68 SUPERFAMILY SSF55174 1 67 3.79E-19 T 23-04-2016 CLI_RS18195 fa23aba70339b084a62bb62d837c406c 132 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 13 90 1.3E-15 T 23-04-2016 IPR019074 Spore cortex biosynthesis protein, YabQ-like CLI_RS18195 fa23aba70339b084a62bb62d837c406c 132 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 4 120 3.4E-38 T 23-04-2016 IPR014242 Spore cortex biosynthesis protein, YabQ CLI_RS10605 1f00b07cfa3acd7e6952731d71d546a2 88 Gene3D G3DSA:1.10.10.10 4 85 3.3E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 Pfam PF13180 PDZ domain 297 382 4.8E-17 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 PANTHER PTHR22939:SF79 56 390 3.8E-119 T 23-04-2016 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 Gene3D G3DSA:2.40.10.10 191 299 1.8E-41 T 23-04-2016 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 SMART SM00228 297 373 1.4E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 SUPERFAMILY SSF50156 278 382 1.26E-22 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 PANTHER PTHR22939 56 390 3.8E-119 T 23-04-2016 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 Gene3D G3DSA:2.40.10.10 88 190 1.1E-34 T 23-04-2016 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 Pfam PF13365 Trypsin-like peptidase domain 126 262 4.2E-33 T 23-04-2016 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 Gene3D G3DSA:2.30.42.10 300 388 6.9E-26 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 SUPERFAMILY SSF50494 95 305 6.08E-59 T 23-04-2016 IPR009003 Peptidase S1, PA clan CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 7.0E-37 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 PRINTS PR00834 HtrA/DegQ protease family signature 135 147 7.0E-37 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 PRINTS PR00834 HtrA/DegQ protease family signature 255 272 7.0E-37 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 PRINTS PR00834 HtrA/DegQ protease family signature 233 250 7.0E-37 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 PRINTS PR00834 HtrA/DegQ protease family signature 196 220 7.0E-37 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLI_RS18245 1a536b694c219ec86cc00be1a9145b0c 390 PRINTS PR00834 HtrA/DegQ protease family signature 156 176 7.0E-37 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLI_RS10865 2163d1f0a8b721afe2205f290e80e2aa 423 Gene3D G3DSA:3.40.50.10770 55 150 1.6E-7 T 23-04-2016 CLI_RS10865 2163d1f0a8b721afe2205f290e80e2aa 423 Gene3D G3DSA:3.40.1350.10 278 416 1.0E-7 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CLI_RS10865 2163d1f0a8b721afe2205f290e80e2aa 423 SUPERFAMILY SSF52980 3 419 9.12E-54 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CLI_RS01575 4011c9b5de1f283a8417dc0be4ae329c 160 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 13 138 8.9E-46 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS01575 4011c9b5de1f283a8417dc0be4ae329c 160 SUPERFAMILY SSF51261 3 159 8.2E-51 T 23-04-2016 IPR011055 Duplicated hybrid motif CLI_RS01575 4011c9b5de1f283a8417dc0be4ae329c 160 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 16 135 4.2E-40 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS01575 4011c9b5de1f283a8417dc0be4ae329c 160 PANTHER PTHR30175 1 110 1.2E-40 T 23-04-2016 CLI_RS01575 4011c9b5de1f283a8417dc0be4ae329c 160 Gene3D G3DSA:2.70.70.10 4 158 5.4E-55 T 23-04-2016 CLI_RS01575 4011c9b5de1f283a8417dc0be4ae329c 160 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 77 89 - T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS15590 5f335d047a36da5b4511120854a39ad9 141 Pfam PF00535 Glycosyl transferase family 2 5 101 2.6E-19 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CLI_RS15590 5f335d047a36da5b4511120854a39ad9 141 PANTHER PTHR10859 1 121 6.2E-26 T 23-04-2016 CLI_RS15590 5f335d047a36da5b4511120854a39ad9 141 PANTHER PTHR10859:SF99 1 121 6.2E-26 T 23-04-2016 CLI_RS15590 5f335d047a36da5b4511120854a39ad9 141 Gene3D G3DSA:3.90.550.10 2 110 1.0E-18 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS15590 5f335d047a36da5b4511120854a39ad9 141 SUPERFAMILY SSF53448 3 130 6.75E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS09085 e82d166432c9620ddbd91d9b5948d880 364 PANTHER PTHR21716:SF14 32 364 1.6E-157 T 23-04-2016 CLI_RS09085 e82d166432c9620ddbd91d9b5948d880 364 Pfam PF01594 Domain of unknown function DUF20 31 356 6.9E-68 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CLI_RS09085 e82d166432c9620ddbd91d9b5948d880 364 PANTHER PTHR21716 32 364 1.6E-157 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CLI_RS00875 def83b4495b47c9819b3056440bbda0a 344 PANTHER PTHR22926:SF3 1 335 2.4E-110 T 23-04-2016 CLI_RS00875 def83b4495b47c9819b3056440bbda0a 344 ProSitePatterns PS01348 MraY family signature 2. 153 164 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS00875 def83b4495b47c9819b3056440bbda0a 344 Pfam PF00953 Glycosyl transferase family 4 76 233 3.0E-43 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS00875 def83b4495b47c9819b3056440bbda0a 344 PANTHER PTHR22926 1 335 2.4E-110 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 SMART SM00387 594 701 3.3E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 PANTHER PTHR24423 417 689 3.5E-113 T 23-04-2016 CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 PANTHER PTHR24423 231 268 3.5E-113 T 23-04-2016 CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 PANTHER PTHR24423:SF526 417 689 3.5E-113 T 23-04-2016 CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 PANTHER PTHR24423:SF526 231 268 3.5E-113 T 23-04-2016 CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 601 686 4.5E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 SUPERFAMILY SSF55874 551 686 3.46E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 Pfam PF00512 His Kinase A (phospho-acceptor) domain 483 548 9.8E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 Gene3D G3DSA:1.10.287.130 474 544 6.0E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 682 4.5E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 649 659 4.5E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 Gene3D G3DSA:3.30.565.10 550 686 2.0E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 SMART SM00388 482 548 3.7E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS08270 297991fb38e366e4e10a24c5c35a725c 701 SUPERFAMILY SSF47384 469 548 2.75E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS16345 087d2f190acf2ce63cae82144a12633b 249 PANTHER PTHR23344 2 248 3.0E-93 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 CLI_RS16345 087d2f190acf2ce63cae82144a12633b 249 PANTHER PTHR23344:SF25 2 248 3.0E-93 T 23-04-2016 CLI_RS16345 087d2f190acf2ce63cae82144a12633b 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 10 235 4.3E-44 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CLI_RS16345 087d2f190acf2ce63cae82144a12633b 249 Gene3D G3DSA:3.20.20.190 4 240 5.2E-76 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CLI_RS16345 087d2f190acf2ce63cae82144a12633b 249 SUPERFAMILY SSF51695 4 238 9.94E-74 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CLI_RS13385 4a414812207859b9d40e160790682e6c 476 Gene3D G3DSA:3.30.870.10 302 450 3.4E-37 T 23-04-2016 CLI_RS13385 4a414812207859b9d40e160790682e6c 476 SMART SM00155 389 416 5.7E-4 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 CLI_RS13385 4a414812207859b9d40e160790682e6c 476 SMART SM00155 206 233 1.1E-6 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 CLI_RS13385 4a414812207859b9d40e160790682e6c 476 SUPERFAMILY SSF56024 257 460 6.06E-48 T 23-04-2016 CLI_RS13385 4a414812207859b9d40e160790682e6c 476 Gene3D G3DSA:3.30.870.10 97 301 2.9E-46 T 23-04-2016 CLI_RS13385 4a414812207859b9d40e160790682e6c 476 Pfam PF13396 Phospholipase_D-nuclease N-terminal 14 55 2.4E-8 T 23-04-2016 IPR027379 Cardiolipin synthase N-terminal CLI_RS13385 4a414812207859b9d40e160790682e6c 476 SUPERFAMILY SSF56024 77 305 3.59E-49 T 23-04-2016 CLI_RS13385 4a414812207859b9d40e160790682e6c 476 Pfam PF13091 PLD-like domain 316 442 1.5E-29 T 23-04-2016 IPR025202 Phospholipase D-like domain CLI_RS13385 4a414812207859b9d40e160790682e6c 476 Pfam PF13091 PLD-like domain 121 252 4.2E-14 T 23-04-2016 IPR025202 Phospholipase D-like domain CLI_RS13385 4a414812207859b9d40e160790682e6c 476 PANTHER PTHR21248 13 476 4.3E-166 T 23-04-2016 CLI_RS13385 4a414812207859b9d40e160790682e6c 476 PANTHER PTHR21248:SF5 13 476 4.3E-166 T 23-04-2016 CLI_RS13385 4a414812207859b9d40e160790682e6c 476 Hamap MF_01916 Cardiolipin synthase. 8 476 40.537 T 23-04-2016 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 CLI_RS13385 4a414812207859b9d40e160790682e6c 476 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 3 476 6.9E-146 T 23-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CLI_RS08020 e4149ab3f84952d35663dc9b88373229 250 PANTHER PTHR40076:SF1 1 250 1.8E-79 T 23-04-2016 CLI_RS08020 e4149ab3f84952d35663dc9b88373229 250 Pfam PF06161 Protein of unknown function (DUF975) 140 229 3.3E-27 T 23-04-2016 IPR010380 Protein of unknown function DUF975 CLI_RS08020 e4149ab3f84952d35663dc9b88373229 250 PANTHER PTHR40076 1 250 1.8E-79 T 23-04-2016 CLI_RS00790 cdfa5af6a534a874849a8afd306940ae 142 Gene3D G3DSA:2.40.128.20 1 140 1.2E-40 T 23-04-2016 IPR012674 Calycin CLI_RS00790 cdfa5af6a534a874849a8afd306940ae 142 Pfam PF09148 Domain of unknown function (DUF1934) 10 134 6.0E-37 T 23-04-2016 IPR015231 Protein of unknown function DUF1934 CLI_RS00790 cdfa5af6a534a874849a8afd306940ae 142 PANTHER PTHR41323 1 142 5.9E-44 T 23-04-2016 CLI_RS00790 cdfa5af6a534a874849a8afd306940ae 142 SUPERFAMILY SSF50814 7 137 2.44E-30 T 23-04-2016 IPR011038 Calycin-like CLI_RS01735 51769c13a582daf64b1a11393cfb03ef 256 SUPERFAMILY SSF52540 3 225 1.33E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01735 51769c13a582daf64b1a11393cfb03ef 256 Gene3D G3DSA:3.40.50.300 3 232 3.5E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01735 51769c13a582daf64b1a11393cfb03ef 256 PANTHER PTHR24220 4 247 1.8E-113 T 23-04-2016 CLI_RS01735 51769c13a582daf64b1a11393cfb03ef 256 PANTHER PTHR24220:SF309 4 247 1.8E-113 T 23-04-2016 CLI_RS01735 51769c13a582daf64b1a11393cfb03ef 256 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLI_RS01735 51769c13a582daf64b1a11393cfb03ef 256 Pfam PF00005 ABC transporter 18 167 1.2E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS01735 51769c13a582daf64b1a11393cfb03ef 256 SMART SM00382 27 212 2.7E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CLI_RS06270 d8013bbff903a2b90b21e1795a03ad70 297 PANTHER PTHR37303:SF1 3 285 3.6E-78 T 23-04-2016 CLI_RS06270 d8013bbff903a2b90b21e1795a03ad70 297 PANTHER PTHR37303 3 285 3.6E-78 T 23-04-2016 CLI_RS12670 3bd549cd78cb3d3fb9592206735d6e02 87 Pfam PF05239 PRC-barrel domain 7 80 3.2E-13 T 23-04-2016 IPR027275 PRC-barrel domain CLI_RS12670 3bd549cd78cb3d3fb9592206735d6e02 87 Gene3D G3DSA:2.30.30.240 7 78 4.5E-18 T 23-04-2016 CLI_RS12670 3bd549cd78cb3d3fb9592206735d6e02 87 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 9 78 1.1E-23 T 23-04-2016 IPR014238 Sporulation protein YlmC/YmxH CLI_RS12670 3bd549cd78cb3d3fb9592206735d6e02 87 PANTHER PTHR40061:SF1 3 87 1.4E-39 T 23-04-2016 CLI_RS12670 3bd549cd78cb3d3fb9592206735d6e02 87 PANTHER PTHR40061 3 87 1.4E-39 T 23-04-2016 CLI_RS12670 3bd549cd78cb3d3fb9592206735d6e02 87 SUPERFAMILY SSF50346 6 78 1.6E-12 T 23-04-2016 IPR011033 PRC-barrel-like CLI_RS08310 0b9342c5b1ccdd96f0590902d653cd88 59 Pfam PF12841 YvrJ protein family 8 42 2.2E-16 T 23-04-2016 IPR024419 Protein of unknown function YvrJ CLI_RS12295 9eec990863c6278c35ad90aa482198ab 148 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 20 147 1.6E-14 T 23-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 CLI_RS13340 12e70cd68dc974171fad6b999f4189fe 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 22 104 5.6E-28 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLI_RS13340 12e70cd68dc974171fad6b999f4189fe 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 7.4E-13 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLI_RS13340 12e70cd68dc974171fad6b999f4189fe 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 34 50 7.4E-13 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLI_RS13340 12e70cd68dc974171fad6b999f4189fe 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 7.4E-13 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLI_RS13340 12e70cd68dc974171fad6b999f4189fe 104 PANTHER PTHR34653 21 104 2.1E-26 T 23-04-2016 CLI_RS13340 12e70cd68dc974171fad6b999f4189fe 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 104 18.067 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLI_RS13340 12e70cd68dc974171fad6b999f4189fe 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 14 103 9.8E-24 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLI_RS06885 081c37ff73c8d363af27ca2de1fcd47b 376 PIRSF PIRSF032908 1 373 1.9E-85 T 23-04-2016 IPR014574 Uncharacterised conserved protein UCP032908 CLI_RS06885 081c37ff73c8d363af27ca2de1fcd47b 376 Pfam PF07853 Protein of unknown function (DUF1648) 149 196 1.1E-14 T 23-04-2016 IPR012867 Domain of unknown function DUF1648 CLI_RS07530 a32cad7f8d470e2d0613e85312ca952e 370 PANTHER PTHR30474:SF2 2 367 1.0E-148 T 23-04-2016 CLI_RS07530 a32cad7f8d470e2d0613e85312ca952e 370 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 12 365 8.9E-117 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CLI_RS07530 a32cad7f8d470e2d0613e85312ca952e 370 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 12 364 3.2E-154 T 23-04-2016 IPR013438 Sporulation stage V, protein E CLI_RS07530 a32cad7f8d470e2d0613e85312ca952e 370 Pfam PF01098 Cell cycle protein 15 367 3.5E-109 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CLI_RS07530 a32cad7f8d470e2d0613e85312ca952e 370 PANTHER PTHR30474 2 367 1.0E-148 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CLI_RS15145 c351fe672def97a647a5bf69ea4f8c74 301 Pfam PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 15 134 4.8E-55 T 23-04-2016 IPR010056 Phage replisome organiser, N-terminal domain CLI_RS15145 c351fe672def97a647a5bf69ea4f8c74 301 TIGRFAM TIGR01714 phage_rep_org_N: phage replisome organizer, putative, N-terminal region 15 134 4.1E-42 T 23-04-2016 IPR010056 Phage replisome organiser, N-terminal domain CLI_RS15145 c351fe672def97a647a5bf69ea4f8c74 301 Gene3D G3DSA:1.10.10.630 193 269 1.4E-5 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS05230 62677a13ad88378242ab5f219ddde276 71 Pfam PF11211 Protein of unknown function (DUF2997) 5 52 2.2E-21 T 23-04-2016 IPR021375 Protein of unknown function DUF2997 CLI_RS06515 42d532915d156411dc7030525582193c 428 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 1 426 3.1E-210 T 23-04-2016 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 CLI_RS06515 42d532915d156411dc7030525582193c 428 PIRSF PIRSF011588 1 428 2.8E-215 T 23-04-2016 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 CLI_RS05650 c78653b5e101b25dcba3b1b3e1bc9f52 52 Pfam PF12669 Virus attachment protein p12 family 2 40 1.1E-11 T 23-04-2016 CLI_RS13275 5943a68d5249cf2397755d080c883ed8 173 PANTHER PTHR35091:SF2 1 173 4.6E-54 T 23-04-2016 CLI_RS13275 5943a68d5249cf2397755d080c883ed8 173 Pfam PF03748 Flagellar basal body-associated protein FliL 79 173 2.9E-18 T 23-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CLI_RS13275 5943a68d5249cf2397755d080c883ed8 173 PANTHER PTHR35091 1 173 4.6E-54 T 23-04-2016 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 Pfam PF00813 FliP family 61 253 5.2E-83 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 234 246 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PANTHER PTHR30587:SF0 18 258 1.6E-127 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 186 201 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 98 117 1.4E-68 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 59 78 1.4E-68 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 78 98 1.4E-68 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 186 206 1.4E-68 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 231 256 1.4E-68 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 207 228 1.4E-68 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 61 257 5.4E-88 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 117 129 1.1E-23 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 129 143 1.1E-23 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 57 66 1.1E-23 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 247 257 1.1E-23 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 157 169 1.1E-23 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 179 191 1.1E-23 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLI_RS13265 732d57723518786fa8791915d790f0b9 258 PANTHER PTHR30587 18 258 1.6E-127 T 23-04-2016 CLI_RS05030 b2e9823ac935f33a754e06684b536d10 162 Pfam PF12822 Protein of unknown function (DUF3816) 4 150 6.0E-19 T 23-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 CLI_RS05030 b2e9823ac935f33a754e06684b536d10 162 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 65 0.008 T 23-04-2016 CLI_RS14860 868811a9dfb16df491da0bdccbb31ba2 100 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 2.0E-16 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14860 868811a9dfb16df491da0bdccbb31ba2 100 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 90 1.8E-39 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14860 868811a9dfb16df491da0bdccbb31ba2 100 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 23-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14860 868811a9dfb16df491da0bdccbb31ba2 100 Pfam PF01016 Ribosomal L27 protein 10 87 2.2E-36 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14860 868811a9dfb16df491da0bdccbb31ba2 100 PANTHER PTHR15893 2 97 6.8E-51 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14860 868811a9dfb16df491da0bdccbb31ba2 100 PRINTS PR00063 Ribosomal protein L27 signature 37 61 2.5E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14860 868811a9dfb16df491da0bdccbb31ba2 100 PRINTS PR00063 Ribosomal protein L27 signature 12 36 2.5E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14860 868811a9dfb16df491da0bdccbb31ba2 100 PRINTS PR00063 Ribosomal protein L27 signature 62 86 2.5E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14860 868811a9dfb16df491da0bdccbb31ba2 100 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 27.66 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS14860 868811a9dfb16df491da0bdccbb31ba2 100 Gene3D G3DSA:2.40.50.100 28 92 5.1E-32 T 23-04-2016 CLI_RS14860 868811a9dfb16df491da0bdccbb31ba2 100 SUPERFAMILY SSF110324 10 91 1.12E-33 T 23-04-2016 CLI_RS05500 5141721824eb7515718f0de9cb899c6a 317 PANTHER PTHR30472 1 317 1.1E-185 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS05500 5141721824eb7515718f0de9cb899c6a 317 Pfam PF01032 FecCD transport family 10 311 1.7E-67 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS05500 5141721824eb7515718f0de9cb899c6a 317 Gene3D G3DSA:1.10.3470.10 6 313 1.2E-71 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS05500 5141721824eb7515718f0de9cb899c6a 317 SUPERFAMILY SSF81345 5 312 1.96E-67 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS05500 5141721824eb7515718f0de9cb899c6a 317 PANTHER PTHR30472:SF27 1 317 1.1E-185 T 23-04-2016 CLI_RS06630 79c273713ed7393957b8a224054091ba 128 Pfam PF11667 Putative zincin peptidase 8 110 8.0E-18 T 23-04-2016 IPR021683 Putative zincin peptidase CLI_RS17820 277b0aef000f9ca2b374e537f7a5a473 94 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 8.7E-43 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLI_RS17820 277b0aef000f9ca2b374e537f7a5a473 94 PIRSF PIRSF002144 1 94 2.8E-32 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CLI_RS17820 277b0aef000f9ca2b374e537f7a5a473 94 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.264 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CLI_RS17820 277b0aef000f9ca2b374e537f7a5a473 94 Pfam PF00203 Ribosomal protein S19 3 83 6.9E-36 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CLI_RS17820 277b0aef000f9ca2b374e537f7a5a473 94 PANTHER PTHR11880 2 92 2.3E-50 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CLI_RS17820 277b0aef000f9ca2b374e537f7a5a473 94 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 CLI_RS17820 277b0aef000f9ca2b374e537f7a5a473 94 Gene3D G3DSA:3.30.860.10 2 92 3.1E-39 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 CLI_RS17820 277b0aef000f9ca2b374e537f7a5a473 94 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.4E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CLI_RS17820 277b0aef000f9ca2b374e537f7a5a473 94 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.4E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CLI_RS17820 277b0aef000f9ca2b374e537f7a5a473 94 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.4E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CLI_RS17820 277b0aef000f9ca2b374e537f7a5a473 94 SUPERFAMILY SSF54570 2 84 7.72E-35 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 CLI_RS03360 a6d6c89a532476b7440a4d4367b074bf 91 Gene3D G3DSA:3.40.50.300 2 91 2.6E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03360 a6d6c89a532476b7440a4d4367b074bf 91 PANTHER PTHR24220 3 91 9.8E-45 T 23-04-2016 CLI_RS03360 a6d6c89a532476b7440a4d4367b074bf 91 PANTHER PTHR24220:SF479 3 91 9.8E-45 T 23-04-2016 CLI_RS06340 e098991af1d7cf12d66128641ff3ce4e 271 PANTHER PTHR35902 27 202 2.1E-12 T 23-04-2016 CLI_RS05785 8d58fe85471e7a0e66b225a1818183df 455 PANTHER PTHR11206 2 447 5.0E-181 T 23-04-2016 CLI_RS05785 8d58fe85471e7a0e66b225a1818183df 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 419 5.0E-66 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS05785 8d58fe85471e7a0e66b225a1818183df 455 PANTHER PTHR11206:SF132 2 447 5.0E-181 T 23-04-2016 CLI_RS05785 8d58fe85471e7a0e66b225a1818183df 455 Pfam PF01554 MatE 252 405 1.4E-21 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS05785 8d58fe85471e7a0e66b225a1818183df 455 Pfam PF01554 MatE 22 185 1.3E-25 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS05785 8d58fe85471e7a0e66b225a1818183df 455 PIRSF PIRSF006603 1 453 6.5E-97 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS04075 dae830d7aed7b7c612b514e219c42ad8 416 Pfam PF06597 Clostridium P-47 protein 3 323 5.9E-29 T 23-04-2016 IPR010567 Clostridium P47 protein CLI_RS06750 5ae082bf7339dbe5bac9323163219690 88 PANTHER PTHR33677 3 87 7.1E-27 T 23-04-2016 CLI_RS06750 5ae082bf7339dbe5bac9323163219690 88 Pfam PF02583 Metal-sensitive transcriptional repressor 4 84 2.6E-27 T 23-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CLI_RS07150 0d7e41a927f23c4956735118cd631407 157 PANTHER PTHR37478 1 131 4.3E-36 T 23-04-2016 CLI_RS07150 0d7e41a927f23c4956735118cd631407 157 PANTHER PTHR37478:SF1 1 131 4.3E-36 T 23-04-2016 CLI_RS07150 0d7e41a927f23c4956735118cd631407 157 Gene3D G3DSA:1.10.10.10 35 82 3.3E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07150 0d7e41a927f23c4956735118cd631407 157 SUPERFAMILY SSF88659 36 78 6.92E-5 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS07150 0d7e41a927f23c4956735118cd631407 157 Hamap MF_00674 UPF0251 protein . 2 98 24.629 T 23-04-2016 IPR002852 Uncharacterised protein family UPF0251 CLI_RS07150 0d7e41a927f23c4956735118cd631407 157 Pfam PF02001 Protein of unknown function DUF134 3 96 6.6E-23 T 23-04-2016 IPR002852 Uncharacterised protein family UPF0251 CLI_RS11030 a6acc806c6e99b5ba39947b1e772ea58 197 Pfam PF00583 Acetyltransferase (GNAT) family 117 178 1.7E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS11030 a6acc806c6e99b5ba39947b1e772ea58 197 SUPERFAMILY SSF55729 1 184 1.59E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS11030 a6acc806c6e99b5ba39947b1e772ea58 197 Gene3D G3DSA:3.40.630.30 4 195 7.6E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS11030 a6acc806c6e99b5ba39947b1e772ea58 197 PANTHER PTHR23091 117 184 6.2E-16 T 23-04-2016 CLI_RS11030 a6acc806c6e99b5ba39947b1e772ea58 197 PANTHER PTHR23091 1 42 6.2E-16 T 23-04-2016 CLI_RS11030 a6acc806c6e99b5ba39947b1e772ea58 197 PANTHER PTHR23091 58 79 6.2E-16 T 23-04-2016 CLI_RS05580 a4b6ee93b41ca3c5e2ad639c4bed8855 233 Pfam PF02517 CAAX protease self-immunity 121 220 4.0E-14 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 CLI_RS13440 d0ac64bb327e3e6751aeaf25203ff3c3 366 PANTHER PTHR21197 1 358 5.6E-116 T 23-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 CLI_RS13440 d0ac64bb327e3e6751aeaf25203ff3c3 366 Gene3D G3DSA:3.40.50.720 1 78 8.4E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS13440 d0ac64bb327e3e6751aeaf25203ff3c3 366 Gene3D G3DSA:3.40.50.720 321 363 8.4E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS13440 d0ac64bb327e3e6751aeaf25203ff3c3 366 Gene3D G3DSA:3.40.50.720 181 254 8.4E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS13440 d0ac64bb327e3e6751aeaf25203ff3c3 366 SUPERFAMILY SSF51971 1 263 3.41E-47 T 23-04-2016 CLI_RS13440 d0ac64bb327e3e6751aeaf25203ff3c3 366 SUPERFAMILY SSF51971 331 357 3.41E-47 T 23-04-2016 CLI_RS13440 d0ac64bb327e3e6751aeaf25203ff3c3 366 SUPERFAMILY SSF54373 245 313 3.34E-26 T 23-04-2016 CLI_RS13440 d0ac64bb327e3e6751aeaf25203ff3c3 366 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 1 362 5.2E-132 T 23-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 CLI_RS13440 d0ac64bb327e3e6751aeaf25203ff3c3 366 Pfam PF13450 NAD(P)-binding Rossmann-like domain 6 71 2.3E-18 T 23-04-2016 CLI_RS13440 d0ac64bb327e3e6751aeaf25203ff3c3 366 Pfam PF03275 UDP-galactopyranose mutase 146 346 1.7E-84 T 23-04-2016 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 CLI_RS13025 be3efdd854872ca37cd0d9c641ae44e0 351 SUPERFAMILY SSF52218 165 327 7.94E-14 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS13025 be3efdd854872ca37cd0d9c641ae44e0 351 Gene3D G3DSA:3.40.50.360 166 309 1.0E-16 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS13025 be3efdd854872ca37cd0d9c641ae44e0 351 Pfam PF03358 NADPH-dependent FMN reductase 165 321 4.9E-13 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLI_RS02455 a8f67c7e244243062f06774369ff8f35 238 PANTHER PTHR11935:SF95 117 229 7.3E-34 T 23-04-2016 CLI_RS02455 a8f67c7e244243062f06774369ff8f35 238 PANTHER PTHR11935:SF95 9 98 7.3E-34 T 23-04-2016 CLI_RS02455 a8f67c7e244243062f06774369ff8f35 238 PANTHER PTHR11935 117 229 7.3E-34 T 23-04-2016 CLI_RS02455 a8f67c7e244243062f06774369ff8f35 238 PANTHER PTHR11935 9 98 7.3E-34 T 23-04-2016 CLI_RS02455 a8f67c7e244243062f06774369ff8f35 238 Gene3D G3DSA:3.60.15.10 134 230 6.3E-33 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02455 a8f67c7e244243062f06774369ff8f35 238 Gene3D G3DSA:3.60.15.10 2 96 6.3E-33 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02455 a8f67c7e244243062f06774369ff8f35 238 SUPERFAMILY SSF56281 3 232 1.49E-26 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02455 a8f67c7e244243062f06774369ff8f35 238 SMART SM00849 21 218 6.8E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS02455 a8f67c7e244243062f06774369ff8f35 238 Pfam PF00753 Metallo-beta-lactamase superfamily 25 184 4.6E-7 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS08505 40ce3437a898672d22d9482584a077f6 277 Pfam PF06161 Protein of unknown function (DUF975) 8 265 9.3E-47 T 23-04-2016 IPR010380 Protein of unknown function DUF975 CLI_RS08505 40ce3437a898672d22d9482584a077f6 277 PANTHER PTHR40076:SF1 6 277 2.0E-77 T 23-04-2016 CLI_RS08505 40ce3437a898672d22d9482584a077f6 277 PANTHER PTHR40076 6 277 2.0E-77 T 23-04-2016 CLI_RS05900 38f1804bb039138e2b43a2d6fac31708 396 Gene3D G3DSA:3.40.50.360 247 392 1.9E-47 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS05900 38f1804bb039138e2b43a2d6fac31708 396 PANTHER PTHR32145:SF2 1 396 1.3E-165 T 23-04-2016 CLI_RS05900 38f1804bb039138e2b43a2d6fac31708 396 SMART SM00849 34 225 7.7E-27 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05900 38f1804bb039138e2b43a2d6fac31708 396 PIRSF PIRSF005243 1 396 5.5E-150 T 23-04-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CLI_RS05900 38f1804bb039138e2b43a2d6fac31708 396 Pfam PF00258 Flavodoxin 254 370 3.0E-9 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLI_RS05900 38f1804bb039138e2b43a2d6fac31708 396 Gene3D G3DSA:3.60.15.10 2 244 5.0E-88 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05900 38f1804bb039138e2b43a2d6fac31708 396 PANTHER PTHR32145 1 396 1.3E-165 T 23-04-2016 CLI_RS05900 38f1804bb039138e2b43a2d6fac31708 396 SUPERFAMILY SSF52218 249 394 8.73E-36 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS05900 38f1804bb039138e2b43a2d6fac31708 396 Pfam PF00753 Metallo-beta-lactamase superfamily 34 168 5.3E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS05900 38f1804bb039138e2b43a2d6fac31708 396 SUPERFAMILY SSF56281 9 282 7.34E-56 T 23-04-2016 IPR001279 Metallo-beta-lactamase CLI_RS09845 6ce070b5281526842a4772824d33da17 223 PANTHER PTHR30183 8 221 6.7E-103 T 23-04-2016 CLI_RS09845 6ce070b5281526842a4772824d33da17 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 216 6.0E-11 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS09845 6ce070b5281526842a4772824d33da17 223 Gene3D G3DSA:1.10.3720.10 12 219 1.7E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS09845 6ce070b5281526842a4772824d33da17 223 SUPERFAMILY SSF161098 13 217 4.06E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS09845 6ce070b5281526842a4772824d33da17 223 PANTHER PTHR30183:SF4 8 221 6.7E-103 T 23-04-2016 CLI_RS02885 4ca9313e5cbcce610b2e8b5ea1bb25e7 178 Pfam PF02417 Chromate transporter 5 170 2.2E-49 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 CLI_RS02885 4ca9313e5cbcce610b2e8b5ea1bb25e7 178 PANTHER PTHR33567 4 178 6.6E-67 T 23-04-2016 CLI_RS14025 782be716b4ba27bb3ed8be224de8120a 182 Gene3D G3DSA:3.40.50.2020 5 172 2.0E-52 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS14025 782be716b4ba27bb3ed8be224de8120a 182 SUPERFAMILY SSF53271 6 170 3.28E-44 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CLI_RS14025 782be716b4ba27bb3ed8be224de8120a 182 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 177 36.978 T 23-04-2016 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CLI_RS14025 782be716b4ba27bb3ed8be224de8120a 182 PANTHER PTHR11608 1 179 8.8E-92 T 23-04-2016 CLI_RS14025 782be716b4ba27bb3ed8be224de8120a 182 Pfam PF00156 Phosphoribosyl transferase domain 12 147 3.8E-24 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLI_RS04675 5fb0cbdc5f5ab9cd944e12dab0e87677 871 PANTHER PTHR30489 282 871 3.5E-25 T 23-04-2016 CLI_RS04675 5fb0cbdc5f5ab9cd944e12dab0e87677 871 Pfam PF02687 FtsX-like permease family 292 416 2.2E-14 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS04675 5fb0cbdc5f5ab9cd944e12dab0e87677 871 Pfam PF02687 FtsX-like permease family 748 863 1.9E-20 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS04675 5fb0cbdc5f5ab9cd944e12dab0e87677 871 PANTHER PTHR30489:SF0 282 871 3.5E-25 T 23-04-2016 CLI_RS06090 4d1e889f5fa80db63815827df6c27f69 264 Gene3D G3DSA:3.40.50.1000 1 72 1.1E-47 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06090 4d1e889f5fa80db63815827df6c27f69 264 Gene3D G3DSA:3.40.50.1000 177 261 1.1E-47 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06090 4d1e889f5fa80db63815827df6c27f69 264 Gene3D G3DSA:3.30.1240.10 87 176 3.2E-14 T 23-04-2016 CLI_RS06090 4d1e889f5fa80db63815827df6c27f69 264 SUPERFAMILY SSF56784 1 260 4.91E-64 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06090 4d1e889f5fa80db63815827df6c27f69 264 PANTHER PTHR10000:SF27 1 263 2.3E-120 T 23-04-2016 CLI_RS06090 4d1e889f5fa80db63815827df6c27f69 264 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 257 4.2E-51 T 23-04-2016 IPR000150 Cof protein GO:0016787 CLI_RS06090 4d1e889f5fa80db63815827df6c27f69 264 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 23-04-2016 IPR000150 Cof protein GO:0016787 CLI_RS06090 4d1e889f5fa80db63815827df6c27f69 264 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 230 1.3E-26 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 CLI_RS06090 4d1e889f5fa80db63815827df6c27f69 264 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 257 4.1E-59 T 23-04-2016 IPR023214 HAD-like domain CLI_RS06090 4d1e889f5fa80db63815827df6c27f69 264 PANTHER PTHR10000 1 263 2.3E-120 T 23-04-2016 CLI_RS05295 27db1bdb0c1c611132f44850975e1fa4 181 SUPERFAMILY SSF102198 26 158 2.35E-22 T 23-04-2016 CLI_RS05295 27db1bdb0c1c611132f44850975e1fa4 181 Gene3D G3DSA:3.50.30.50 27 170 1.1E-18 T 23-04-2016 CLI_RS05295 27db1bdb0c1c611132f44850975e1fa4 181 Pfam PF04199 Putative cyclase 21 125 4.0E-10 T 23-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 PANTHER PTHR11908 574 776 2.3E-304 T 23-04-2016 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 Gene3D G3DSA:3.30.365.10 627 770 1.8E-51 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 Gene3D G3DSA:3.30.365.10 365 454 1.8E-51 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 PANTHER PTHR11908:SF95 160 553 2.3E-304 T 23-04-2016 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 PANTHER PTHR11908:SF95 574 776 2.3E-304 T 23-04-2016 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 PANTHER PTHR11908:SF95 3 142 2.3E-304 T 23-04-2016 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 Gene3D G3DSA:3.30.365.10 181 286 8.9E-28 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 SUPERFAMILY SSF56003 115 770 2.49E-165 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 155 712 6.8E-148 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 Gene3D G3DSA:3.90.1170.50 4 111 1.3E-40 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 Gene3D G3DSA:3.30.365.10 455 594 1.3E-36 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 SUPERFAMILY SSF54665 4 143 9.29E-42 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 19 123 1.7E-26 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 SMART SM01008 19 123 1.8E-46 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 Gene3D G3DSA:3.30.365.10 289 363 1.0E-31 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 Gene3D G3DSA:3.30.365.10 112 180 1.0E-31 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 PANTHER PTHR11908 160 553 2.3E-304 T 23-04-2016 CLI_RS14180 af7041b4ae1e912059942a8454476e04 776 PANTHER PTHR11908 3 142 2.3E-304 T 23-04-2016 CLI_RS07035 5c1a338b0a7be6e8444bead2c8c26b94 202 SUPERFAMILY SSF159275 12 195 1.09E-55 T 23-04-2016 CLI_RS07035 5c1a338b0a7be6e8444bead2c8c26b94 202 Pfam PF06475 Putative glycolipid-binding 14 194 1.2E-56 T 23-04-2016 IPR009467 Putative glycolipid-binding protein CLI_RS07835 76916fb5d2b2e73b6870f27ce09b6209 115 PANTHER PTHR37310 3 115 3.3E-23 T 23-04-2016 CLI_RS15450 1190bbf2374716b01aabe2b4f7b50f7f 364 Pfam PF00534 Glycosyl transferases group 1 176 336 5.6E-43 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CLI_RS15450 1190bbf2374716b01aabe2b4f7b50f7f 364 PANTHER PTHR12526 1 360 1.8E-56 T 23-04-2016 CLI_RS15450 1190bbf2374716b01aabe2b4f7b50f7f 364 Pfam PF13477 Glycosyl transferase 4-like 2 140 1.4E-43 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLI_RS15450 1190bbf2374716b01aabe2b4f7b50f7f 364 SUPERFAMILY SSF53756 12 361 1.18E-76 T 23-04-2016 CLI_RS15450 1190bbf2374716b01aabe2b4f7b50f7f 364 Gene3D G3DSA:3.40.50.2000 152 335 6.2E-26 T 23-04-2016 CLI_RS07175 6e7723f1159a7f1811d966749935c698 125 SUPERFAMILY SSF50729 6 124 2.62E-46 T 23-04-2016 IPR011993 PH domain-like CLI_RS07175 6e7723f1159a7f1811d966749935c698 125 PANTHER PTHR35796 1 124 4.1E-52 T 23-04-2016 CLI_RS07175 6e7723f1159a7f1811d966749935c698 125 Pfam PF08000 Bacterial PH domain 2 123 2.3E-52 T 23-04-2016 IPR012544 Bacterial Pleckstrin homology domain CLI_RS07175 6e7723f1159a7f1811d966749935c698 125 Gene3D G3DSA:2.30.29.50 4 104 8.1E-46 T 23-04-2016 IPR012544 Bacterial Pleckstrin homology domain CLI_RS16930 3ce24806111c81459ca807d15b437764 544 PANTHER PTHR34220:SF3 4 540 1.1E-116 T 23-04-2016 CLI_RS16930 3ce24806111c81459ca807d15b437764 544 SUPERFAMILY SSF55874 405 540 2.88E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS16930 3ce24806111c81459ca807d15b437764 544 Pfam PF06580 Histidine kinase 348 426 1.8E-28 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLI_RS16930 3ce24806111c81459ca807d15b437764 544 Gene3D G3DSA:3.30.565.10 398 541 1.9E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS16930 3ce24806111c81459ca807d15b437764 544 SMART SM00387 437 543 1.5E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS16930 3ce24806111c81459ca807d15b437764 544 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 446 542 6.3E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS16930 3ce24806111c81459ca807d15b437764 544 Pfam PF07694 5TMR of 5TMR-LYT 24 188 9.7E-53 T 23-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CLI_RS16930 3ce24806111c81459ca807d15b437764 544 PANTHER PTHR34220 4 540 1.1E-116 T 23-04-2016 CLI_RS03550 44967b19b6ea240f3be5aba582c9bade 297 PANTHER PTHR32196 4 291 5.4E-148 T 23-04-2016 CLI_RS03550 44967b19b6ea240f3be5aba582c9bade 297 PANTHER PTHR32196:SF27 4 291 5.4E-148 T 23-04-2016 CLI_RS03550 44967b19b6ea240f3be5aba582c9bade 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 267 4.1E-26 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLI_RS08010 c6418454cf0c7489f16e7c69fefeeddc 272 PANTHER PTHR10794 142 234 2.0E-23 T 23-04-2016 CLI_RS08010 c6418454cf0c7489f16e7c69fefeeddc 272 Pfam PF02517 CAAX protease self-immunity 134 220 2.9E-21 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 CLI_RS00295 6f6237ec28d336638267936710196eeb 480 Pfam PF13786 Domain of unknown function (DUF4179) 56 145 1.7E-23 T 23-04-2016 IPR025436 Domain of unknown function DUF4179 CLI_RS00295 6f6237ec28d336638267936710196eeb 480 Gene3D G3DSA:2.60.40.1630 86 226 9.0E-37 T 23-04-2016 CLI_RS02525 ec4db95394a64a0bff95b0a84f82b074 290 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 274 1.4E-44 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLI_RS02525 ec4db95394a64a0bff95b0a84f82b074 290 PANTHER PTHR11795:SF371 1 290 1.4E-118 T 23-04-2016 CLI_RS02525 ec4db95394a64a0bff95b0a84f82b074 290 PANTHER PTHR11795 1 290 1.4E-118 T 23-04-2016 CLI_RS10440 d5ec1793001ac6816fd444bb5be8b226 338 Pfam PF14390 Putative PD-(D/E)XK family member, (DUF4420) 24 316 3.3E-56 T 23-04-2016 IPR025534 Putative PD-(D/E)XK family member (DUF4420) CLI_RS08695 ecd39bf700150dd1b8b51b622a30107a 309 PANTHER PTHR33308:SF3 24 300 1.0E-35 T 23-04-2016 CLI_RS08695 ecd39bf700150dd1b8b51b622a30107a 309 PANTHER PTHR33308 24 300 1.0E-35 T 23-04-2016 CLI_RS08695 ecd39bf700150dd1b8b51b622a30107a 309 SMART SM00047 134 299 1.5E-21 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CLI_RS08695 ecd39bf700150dd1b8b51b622a30107a 309 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 158 295 1.5E-20 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CLI_RS04020 e40a0995294297e6ab73799dfdcc18b2 356 Pfam PF01758 Sodium Bile acid symporter family 57 254 7.2E-47 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CLI_RS04020 e40a0995294297e6ab73799dfdcc18b2 356 PANTHER PTHR10361 4 346 1.0E-135 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CLI_RS04020 e40a0995294297e6ab73799dfdcc18b2 356 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 12 342 8.4E-117 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CLI_RS04020 e40a0995294297e6ab73799dfdcc18b2 356 PIRSF PIRSF005508 1 356 2.3E-132 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CLI_RS04020 e40a0995294297e6ab73799dfdcc18b2 356 PANTHER PTHR10361:SF31 4 346 1.0E-135 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CLI_RS18580 c386eb9ef82b5881c5a38132720cea8f 326 Gene3D G3DSA:3.40.47.10 1 159 2.7E-61 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS18580 c386eb9ef82b5881c5a38132720cea8f 326 PANTHER PTHR34069:SF2 1 325 2.1E-140 T 23-04-2016 CLI_RS18580 c386eb9ef82b5881c5a38132720cea8f 326 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 324 1.0E-30 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CLI_RS18580 c386eb9ef82b5881c5a38132720cea8f 326 Gene3D G3DSA:3.40.47.10 160 324 1.0E-49 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS18580 c386eb9ef82b5881c5a38132720cea8f 326 SUPERFAMILY SSF53901 4 324 1.2E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLI_RS18580 c386eb9ef82b5881c5a38132720cea8f 326 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 324 67.913 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CLI_RS18580 c386eb9ef82b5881c5a38132720cea8f 326 PANTHER PTHR34069 1 325 2.1E-140 T 23-04-2016 CLI_RS18580 c386eb9ef82b5881c5a38132720cea8f 326 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 6.6E-30 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CLI_RS18580 c386eb9ef82b5881c5a38132720cea8f 326 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 323 9.8E-115 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 Pfam PF12705 PD-(D/E)XK nuclease superfamily 65 156 1.9E-5 T 23-04-2016 CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 SMART SM00488 190 437 4.2E-6 T 23-04-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 Pfam PF13307 Helicase C-terminal domain 600 765 1.2E-40 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 SMART SM00491 616 752 3.1E-11 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 Gene3D G3DSA:3.40.50.300 588 758 2.1E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 Gene3D G3DSA:3.40.50.300 353 404 5.8E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 Gene3D G3DSA:3.40.50.300 525 544 5.8E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 Gene3D G3DSA:3.40.50.300 191 301 5.8E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 SUPERFAMILY SSF52540 531 745 3.64E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 SUPERFAMILY SSF52540 212 268 3.64E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 SUPERFAMILY SSF52540 334 408 3.64E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 PANTHER PTHR11472 194 784 5.0E-100 T 23-04-2016 CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 SUPERFAMILY SSF52540 159 300 1.36E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 SUPERFAMILY SSF52540 352 423 1.36E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02780 3230fef52fe0a69cd6bd1d9f017dfa59 784 Pfam PF06733 DEAD_2 285 406 1.4E-13 T 23-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 CLI_RS16200 70c365bad5d1c58228e6d7fe5307f6a4 787 PANTHER PTHR30191:SF6 1 787 0.0 T 23-04-2016 CLI_RS16200 70c365bad5d1c58228e6d7fe5307f6a4 787 Pfam PF01228 Glycine radical 665 768 4.0E-33 T 23-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CLI_RS16200 70c365bad5d1c58228e6d7fe5307f6a4 787 SUPERFAMILY SSF51998 2 785 1.1E-238 T 23-04-2016 CLI_RS16200 70c365bad5d1c58228e6d7fe5307f6a4 787 Pfam PF02901 Pyruvate formate lyase-like 2 649 5.8E-233 T 23-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 CLI_RS16200 70c365bad5d1c58228e6d7fe5307f6a4 787 PANTHER PTHR30191 1 787 0.0 T 23-04-2016 CLI_RS16200 70c365bad5d1c58228e6d7fe5307f6a4 787 Gene3D G3DSA:3.20.70.20 2 786 3.2E-256 T 23-04-2016 CLI_RS16200 70c365bad5d1c58228e6d7fe5307f6a4 787 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 1 784 4.4E-205 T 23-04-2016 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 CLI_RS06815 3c186a46938f94d157803e64ce5591a5 155 Gene3D G3DSA:2.60.120.380 34 150 1.9E-6 T 23-04-2016 CLI_RS16570 c57c0c3e42131f0d530e3ef0c4f26f47 363 PANTHER PTHR34184:SF4 14 362 2.7E-125 T 23-04-2016 CLI_RS16570 c57c0c3e42131f0d530e3ef0c4f26f47 363 PANTHER PTHR34184 14 362 2.7E-125 T 23-04-2016 CLI_RS16570 c57c0c3e42131f0d530e3ef0c4f26f47 363 Pfam PF03773 Predicted permease 12 301 2.8E-53 T 23-04-2016 IPR005524 Predicted permease DUF318 CLI_RS11755 5e9d964867c50f66a9cba8ebd1462127 154 Pfam PF09393 Phage tail tube protein 4 146 3.5E-49 T 23-04-2016 IPR018989 Phage tail tube protein CLI_RS11755 5e9d964867c50f66a9cba8ebd1462127 154 SUPERFAMILY SSF69279 7 148 1.11E-46 T 23-04-2016 CLI_RS10980 7d586317e95910bb1b07f99ef4bc35c9 375 PANTHER PTHR30548 1 375 1.9E-240 T 23-04-2016 CLI_RS10980 7d586317e95910bb1b07f99ef4bc35c9 375 PANTHER PTHR30548:SF5 1 375 1.9E-240 T 23-04-2016 CLI_RS10980 7d586317e95910bb1b07f99ef4bc35c9 375 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 39 375 3.5E-62 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS02040 e006d169627967dc6a67b15946d0e7d5 471 PANTHER PTHR11819:SF7 1 464 1.2E-132 T 23-04-2016 CLI_RS02040 e006d169627967dc6a67b15946d0e7d5 471 Pfam PF00474 Sodium:solute symporter family 32 426 5.6E-39 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS02040 e006d169627967dc6a67b15946d0e7d5 471 PANTHER PTHR11819 1 464 1.2E-132 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS03475 5c010289eefc2a920e36dd5e95bdf79d 396 Gene3D G3DSA:3.30.1330.100 254 395 2.7E-56 T 23-04-2016 CLI_RS03475 5c010289eefc2a920e36dd5e95bdf79d 396 Gene3D G3DSA:3.30.1330.100 3 61 2.7E-56 T 23-04-2016 CLI_RS03475 5c010289eefc2a920e36dd5e95bdf79d 396 SUPERFAMILY SSF144010 357 395 7.45E-49 T 23-04-2016 CLI_RS03475 5c010289eefc2a920e36dd5e95bdf79d 396 SUPERFAMILY SSF144010 153 198 7.45E-49 T 23-04-2016 CLI_RS03475 5c010289eefc2a920e36dd5e95bdf79d 396 SUPERFAMILY SSF144010 237 329 7.45E-49 T 23-04-2016 CLI_RS03475 5c010289eefc2a920e36dd5e95bdf79d 396 SUPERFAMILY SSF144010 6 76 7.45E-49 T 23-04-2016 CLI_RS03475 5c010289eefc2a920e36dd5e95bdf79d 396 Pfam PF01996 F420-0:Gamma-glutamyl ligase 11 389 1.2E-85 T 23-04-2016 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199|UniPathway: UPA00071 CLI_RS03230 f06cb05eb249153893cac87d0a0da3b2 151 SMART SM00850 50 147 7.9E-25 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 CLI_RS03230 f06cb05eb249153893cac87d0a0da3b2 151 Gene3D G3DSA:2.40.50.40 41 109 4.6E-16 T 23-04-2016 CLI_RS03230 f06cb05eb249153893cac87d0a0da3b2 151 Pfam PF04397 LytTr DNA-binding domain 53 144 2.2E-19 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 CLI_RS03230 f06cb05eb249153893cac87d0a0da3b2 151 PANTHER PTHR37299 1 151 3.7E-43 T 23-04-2016 CLI_RS14925 1e0b7cfa9ff77f24db6ee509d4ff9e84 163 Pfam PF04093 rod shape-determining protein MreD 5 154 1.1E-19 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CLI_RS14925 1e0b7cfa9ff77f24db6ee509d4ff9e84 163 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 5 153 8.0E-28 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CLI_RS14925 1e0b7cfa9ff77f24db6ee509d4ff9e84 163 PIRSF PIRSF037497 2 163 2.6E-39 T 23-04-2016 IPR017225 Cell shape-determining protein MreD, predicted CLI_RS02280 62f0156f50fdb468bf9b03dfbd2de948 371 SUPERFAMILY SSF54001 68 187 2.16E-6 T 23-04-2016 CLI_RS06545 6589d594d60cdb4eeb0432d4c9fd387f 109 PIRSF PIRSF000181 1 109 2.8E-55 T 23-04-2016 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 CLI_RS06545 6589d594d60cdb4eeb0432d4c9fd387f 109 Pfam PF04723 Glycine reductase complex selenoprotein A 1 101 3.7E-50 T 23-04-2016 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 CLI_RS07420 f0ad711a90da5e4887271925f17fb7b1 772 Gene3D G3DSA:3.30.230.10 545 740 4.8E-35 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS07420 f0ad711a90da5e4887271925f17fb7b1 772 PANTHER PTHR10046:SF46 9 744 4.4E-126 T 23-04-2016 CLI_RS07420 f0ad711a90da5e4887271925f17fb7b1 772 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 543 739 3.0E-16 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CLI_RS07420 f0ad711a90da5e4887271925f17fb7b1 772 SUPERFAMILY SSF54211 547 741 7.21E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS07420 f0ad711a90da5e4887271925f17fb7b1 772 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 630 649 7.2E-12 T 23-04-2016 CLI_RS07420 f0ad711a90da5e4887271925f17fb7b1 772 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 690 708 7.2E-12 T 23-04-2016 CLI_RS07420 f0ad711a90da5e4887271925f17fb7b1 772 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 549 565 7.2E-12 T 23-04-2016 CLI_RS07420 f0ad711a90da5e4887271925f17fb7b1 772 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 660 679 7.2E-12 T 23-04-2016 CLI_RS07420 f0ad711a90da5e4887271925f17fb7b1 772 Pfam PF13654 AAA domain 35 524 2.4E-112 T 23-04-2016 CLI_RS07420 f0ad711a90da5e4887271925f17fb7b1 772 PANTHER PTHR10046 9 744 4.4E-126 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 CLI_RS01860 1388ffb29d44b72d6e4ffb3057835db2 229 Pfam PF04647 Accessory gene regulator B 8 197 2.0E-41 T 23-04-2016 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLI_RS01860 1388ffb29d44b72d6e4ffb3057835db2 229 SMART SM00793 6 206 1.1E-22 T 23-04-2016 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLI_RS01030 522d99bbd72d9421dfdf2e6a09dd5d65 325 SUPERFAMILY SSF75620 1 322 2.49E-126 T 23-04-2016 CLI_RS01030 522d99bbd72d9421dfdf2e6a09dd5d65 325 Gene3D G3DSA:1.20.58.410 1 73 6.9E-19 T 23-04-2016 CLI_RS01030 522d99bbd72d9421dfdf2e6a09dd5d65 325 Gene3D G3DSA:3.30.160.20 187 265 5.1E-36 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CLI_RS01030 522d99bbd72d9421dfdf2e6a09dd5d65 325 Pfam PF00472 RF-1 domain 188 297 1.2E-40 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLI_RS01030 522d99bbd72d9421dfdf2e6a09dd5d65 325 Pfam PF03462 PCRF domain 1 179 7.7E-58 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CLI_RS01030 522d99bbd72d9421dfdf2e6a09dd5d65 325 SMART SM00937 45 154 4.1E-51 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CLI_RS01030 522d99bbd72d9421dfdf2e6a09dd5d65 325 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 322 2.4E-147 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CLI_RS01030 522d99bbd72d9421dfdf2e6a09dd5d65 325 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 204 220 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLI_RS01030 522d99bbd72d9421dfdf2e6a09dd5d65 325 PANTHER PTHR11075 1 322 1.4E-152 T 23-04-2016 CLI_RS01030 522d99bbd72d9421dfdf2e6a09dd5d65 325 PANTHER PTHR11075:SF6 1 322 1.4E-152 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CLI_RS10260 4f59738d45894a45155d5c2492e31e0d 448 PANTHER PTHR11654:SF119 2 392 6.4E-78 T 23-04-2016 CLI_RS10260 4f59738d45894a45155d5c2492e31e0d 448 Gene3D G3DSA:1.20.1250.20 219 430 4.5E-7 T 23-04-2016 CLI_RS10260 4f59738d45894a45155d5c2492e31e0d 448 Gene3D G3DSA:1.20.1250.20 37 218 2.0E-17 T 23-04-2016 CLI_RS10260 4f59738d45894a45155d5c2492e31e0d 448 Pfam PF07690 Major Facilitator Superfamily 25 392 1.1E-23 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS10260 4f59738d45894a45155d5c2492e31e0d 448 PANTHER PTHR11654 2 392 6.4E-78 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS10260 4f59738d45894a45155d5c2492e31e0d 448 SUPERFAMILY SSF103473 6 429 2.35E-37 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS13605 45327e0d5e69cdd46dc54a86801126ae 72 PANTHER PTHR34984 1 71 6.9E-32 T 23-04-2016 CLI_RS13605 45327e0d5e69cdd46dc54a86801126ae 72 Pfam PF02599 Global regulator protein family 1 53 1.6E-24 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CLI_RS13605 45327e0d5e69cdd46dc54a86801126ae 72 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-14 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CLI_RS13605 45327e0d5e69cdd46dc54a86801126ae 72 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 69 1.0E-24 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CLI_RS13605 45327e0d5e69cdd46dc54a86801126ae 72 PANTHER PTHR34984:SF1 1 71 6.9E-32 T 23-04-2016 CLI_RS13605 45327e0d5e69cdd46dc54a86801126ae 72 SUPERFAMILY SSF117130 1 55 1.83E-18 T 23-04-2016 CLI_RS13605 45327e0d5e69cdd46dc54a86801126ae 72 Hamap MF_00167 Carbon storage regulator [csrA]. 1 67 19.294 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CLI_RS12795 c055f722ddb970842d28f273623ad5b9 343 PANTHER PTHR30518 5 339 2.8E-86 T 23-04-2016 CLI_RS12795 c055f722ddb970842d28f273623ad5b9 343 PANTHER PTHR30518:SF2 5 339 2.8E-86 T 23-04-2016 CLI_RS12795 c055f722ddb970842d28f273623ad5b9 343 Pfam PF02618 YceG-like family 47 337 4.5E-76 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like CLI_RS12795 c055f722ddb970842d28f273623ad5b9 343 Gene3D G3DSA:3.30.160.60 312 332 2.6E-6 T 23-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 CLI_RS12795 c055f722ddb970842d28f273623ad5b9 343 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 339 2.0E-75 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like CLI_RS11725 cf364f626ee45aa33e950e81fc89fb40 114 ProDom PD028957 PBSX RELATED XKDR ELEMENT LIN1285 PHAGE PHAGE-LIKE YQBR 5 113 5.0E-6 T 23-04-2016 IPR022555 Protein of unknown function, DUF2577 CLI_RS11725 cf364f626ee45aa33e950e81fc89fb40 114 Pfam PF10844 Protein of unknown function (DUF2577) 7 112 3.1E-28 T 23-04-2016 IPR022555 Protein of unknown function, DUF2577 CLI_RS07850 2d7e2528296e0bc112965d3ff6e060c4 180 Gene3D G3DSA:3.40.50.360 3 105 1.4E-11 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS07850 2d7e2528296e0bc112965d3ff6e060c4 180 Pfam PF12724 Flavodoxin domain 7 142 6.8E-30 T 23-04-2016 IPR026816 Flavodoxin domain CLI_RS07850 2d7e2528296e0bc112965d3ff6e060c4 180 SUPERFAMILY SSF52218 3 143 1.71E-18 T 23-04-2016 IPR029039 Flavoprotein-like domain CLI_RS05215 f9660241166c3a9d3d6f159813acc9e3 181 SUPERFAMILY SSF56300 1 172 2.23E-39 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS05215 f9660241166c3a9d3d6f159813acc9e3 181 PANTHER PTHR11124 1 181 8.2E-68 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 CLI_RS05215 f9660241166c3a9d3d6f159813acc9e3 181 Gene3D G3DSA:3.60.21.10 1 166 2.3E-42 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS05215 f9660241166c3a9d3d6f159813acc9e3 181 PANTHER PTHR11124:SF14 1 181 8.2E-68 T 23-04-2016 CLI_RS05215 f9660241166c3a9d3d6f159813acc9e3 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 164 2.8E-31 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 CLI_RS05215 f9660241166c3a9d3d6f159813acc9e3 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 160 1.6E-25 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 Gene3D G3DSA:2.40.50.140 237 316 3.9E-6 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 231 1430 0.0 T 23-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 PANTHER PTHR23044:SF26 1101 1406 0.0 T 23-04-2016 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 PANTHER PTHR23044:SF26 819 904 0.0 T 23-04-2016 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 PANTHER PTHR23044:SF26 922 1063 0.0 T 23-04-2016 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 PANTHER PTHR23044:SF26 21 546 0.0 T 23-04-2016 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 SMART SM00479 417 582 8.1E-53 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 Gene3D G3DSA:1.10.150.280 1367 1418 2.9E-10 T 23-04-2016 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 819 1234 2.4E-89 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 Pfam PF11490 DNA polymerase III polC-type N-terminus II 89 200 3.0E-20 T 23-04-2016 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 Pfam PF02811 PHP domain 334 690 2.8E-51 T 23-04-2016 IPR004013 PHP domain GO:0003824 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 Pfam PF00929 Exonuclease 419 573 5.2E-39 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1432 400.907 T 23-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 SMART SM00481 333 400 5.1E-29 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 PANTHER PTHR23044 1101 1406 0.0 T 23-04-2016 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 PANTHER PTHR23044 819 904 0.0 T 23-04-2016 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 PANTHER PTHR23044 922 1063 0.0 T 23-04-2016 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 PANTHER PTHR23044 21 546 0.0 T 23-04-2016 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 SUPERFAMILY SSF50249 237 312 2.4E-6 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 Pfam PF14579 Helix-hairpin-helix motif 1342 1424 3.1E-13 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 415 629 4.6E-44 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 Gene3D G3DSA:1.20.5.140 555 589 7.8E-17 T 23-04-2016 IPR023223 DNA polymerase III/inhibitor IA3, alpha-helix domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 SUPERFAMILY SSF53098 417 870 5.92E-105 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 Gene3D G3DSA:3.30.420.10 417 554 1.4E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 Gene3D G3DSA:3.20.20.140 331 416 2.2E-64 T 23-04-2016 CLI_RS12085 6ef6133340c66ae5dd8bf9584bb5dd37 1432 Gene3D G3DSA:3.20.20.140 625 788 2.2E-64 T 23-04-2016 CLI_RS01650 59a63f0f6dcd54df306b7d3d02cd8cd1 212 SUPERFAMILY SSF51735 1 210 3.36E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01650 59a63f0f6dcd54df306b7d3d02cd8cd1 212 Pfam PF13460 NAD(P)H-binding 7 200 1.0E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01650 59a63f0f6dcd54df306b7d3d02cd8cd1 212 PANTHER PTHR15020:SF29 1 212 2.9E-84 T 23-04-2016 CLI_RS01650 59a63f0f6dcd54df306b7d3d02cd8cd1 212 Gene3D G3DSA:3.40.50.720 1 211 6.3E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS01650 59a63f0f6dcd54df306b7d3d02cd8cd1 212 PANTHER PTHR15020 1 212 2.9E-84 T 23-04-2016 CLI_RS07540 ecd53cbe13762013007f0f19ac1a4863 237 Pfam PF05949 Bacterial protein of unknown function (DUF881) 89 232 1.2E-34 T 23-04-2016 IPR010273 Protein of unknown function DUF881 CLI_RS07540 ecd53cbe13762013007f0f19ac1a4863 237 PANTHER PTHR37313 1 236 2.7E-91 T 23-04-2016 CLI_RS07540 ecd53cbe13762013007f0f19ac1a4863 237 PANTHER PTHR37313:SF2 1 236 2.7E-91 T 23-04-2016 CLI_RS12585 a06a93b9ef583ebb7732f6e7400df143 292 Pfam PF08340 Domain of unknown function (DUF1732) 209 292 6.9E-36 T 23-04-2016 IPR013551 Domain of unknown function DUF1732 CLI_RS12585 a06a93b9ef583ebb7732f6e7400df143 292 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 292 3.0E-80 T 23-04-2016 IPR005229 Conserved hypothetical protein CHP00255 CLI_RS12585 a06a93b9ef583ebb7732f6e7400df143 292 Pfam PF03755 YicC-like family, N-terminal region 2 156 5.0E-45 T 23-04-2016 IPR013527 YicC-like, N-terminal CLI_RS12585 a06a93b9ef583ebb7732f6e7400df143 292 PANTHER PTHR30636 1 292 5.9E-105 T 23-04-2016 CLI_RS14295 902aa1055bbbf5e2ee55d26e2b2a16df 361 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 2 351 4.1E-55 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS14295 902aa1055bbbf5e2ee55d26e2b2a16df 361 PANTHER PTHR34975 1 357 2.5E-25 T 23-04-2016 CLI_RS14295 902aa1055bbbf5e2ee55d26e2b2a16df 361 Pfam PF03845 Spore germination protein 4 314 6.6E-29 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLI_RS04275 b4fdc77414f902b2070b78a21db24af9 48 SUPERFAMILY SSF54593 2 39 7.37E-7 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS04275 b4fdc77414f902b2070b78a21db24af9 48 Gene3D G3DSA:3.10.180.10 4 40 1.4E-6 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS10030 101ef817351b32a1ee8f843f2866ebb2 326 Pfam PF12345 Protein of unknown function (DUF3641) 192 324 8.4E-55 T 23-04-2016 IPR024521 Domain of unknown function DUF3641 CLI_RS10030 101ef817351b32a1ee8f843f2866ebb2 326 PANTHER PTHR11228 32 323 1.3E-148 T 23-04-2016 CLI_RS10030 101ef817351b32a1ee8f843f2866ebb2 326 TIGRFAM TIGR04167 rSAM_SeCys: radical SAM/Cys-rich domain protein 29 324 3.4E-136 T 23-04-2016 IPR026351 Radical SAM/Cys-rich domain protein CLI_RS10030 101ef817351b32a1ee8f843f2866ebb2 326 PANTHER PTHR11228:SF20 32 323 1.3E-148 T 23-04-2016 CLI_RS10030 101ef817351b32a1ee8f843f2866ebb2 326 Pfam PF04055 Radical SAM superfamily 37 175 4.4E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS10030 101ef817351b32a1ee8f843f2866ebb2 326 Pfam PF13353 4Fe-4S single cluster domain 43 135 5.1E-5 T 23-04-2016 CLI_RS10030 101ef817351b32a1ee8f843f2866ebb2 326 SUPERFAMILY SSF102114 32 322 2.75E-40 T 23-04-2016 CLI_RS10030 101ef817351b32a1ee8f843f2866ebb2 326 Gene3D G3DSA:3.20.20.70 30 323 3.2E-28 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS01165 900cb0ef3db47638604e42b67949ae21 294 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 126 1.9E-29 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CLI_RS01165 900cb0ef3db47638604e42b67949ae21 294 SUPERFAMILY SSF111331 1 290 9.65E-73 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain CLI_RS01165 900cb0ef3db47638604e42b67949ae21 294 PANTHER PTHR12358 3 291 1.2E-56 T 23-04-2016 CLI_RS01165 900cb0ef3db47638604e42b67949ae21 294 SMART SM00046 3 130 6.8E-4 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CLI_RS01165 900cb0ef3db47638604e42b67949ae21 294 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 289 2.2E-57 T 23-04-2016 IPR005218 Diacylglycerol/lipid kinase CLI_RS14000 1e78178cadc6904607a9b6f9f6bd0ad7 373 PANTHER PTHR40032:SF1 1 373 2.8E-243 T 23-04-2016 CLI_RS14000 1e78178cadc6904607a9b6f9f6bd0ad7 373 PANTHER PTHR40032 1 373 2.8E-243 T 23-04-2016 CLI_RS14000 1e78178cadc6904607a9b6f9f6bd0ad7 373 Pfam PF12671 Putative amidase domain 210 368 4.5E-42 T 23-04-2016 IPR024301 Putative amidase domain CLI_RS04730 9b9efef6c1d997ace2652642fbaae433 287 PANTHER PTHR22911:SF44 1 287 1.2E-90 T 23-04-2016 CLI_RS04730 9b9efef6c1d997ace2652642fbaae433 287 SUPERFAMILY SSF103481 47 139 8.89E-15 T 23-04-2016 CLI_RS04730 9b9efef6c1d997ace2652642fbaae433 287 SUPERFAMILY SSF103481 189 285 8.11E-14 T 23-04-2016 CLI_RS04730 9b9efef6c1d997ace2652642fbaae433 287 PANTHER PTHR22911 1 287 1.2E-90 T 23-04-2016 CLI_RS04730 9b9efef6c1d997ace2652642fbaae433 287 Pfam PF00892 EamA-like transporter family 2 137 2.1E-20 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CLI_RS04730 9b9efef6c1d997ace2652642fbaae433 287 Pfam PF00892 EamA-like transporter family 150 285 1.2E-21 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CLI_RS01945 59faa8e33782c4ee931d515500d185d8 156 Pfam PF11385 Protein of unknown function (DUF3189) 3 148 6.1E-55 T 23-04-2016 IPR021525 Protein of unknown function DUF3189 CLI_RS13655 3c9f682070b8539cdcdf63b3ded740d5 199 Pfam PF04509 CheC-like family 104 141 1.0E-10 T 23-04-2016 IPR007597 CheC-like protein GO:0016787 CLI_RS13655 3c9f682070b8539cdcdf63b3ded740d5 199 Pfam PF04509 CheC-like family 10 46 7.1E-15 T 23-04-2016 IPR007597 CheC-like protein GO:0016787 CLI_RS13655 3c9f682070b8539cdcdf63b3ded740d5 199 PANTHER PTHR22617:SF36 1 169 1.8E-39 T 23-04-2016 CLI_RS13655 3c9f682070b8539cdcdf63b3ded740d5 199 Gene3D G3DSA:3.40.1550.10 5 198 1.1E-64 T 23-04-2016 IPR028976 CheC-like domain CLI_RS13655 3c9f682070b8539cdcdf63b3ded740d5 199 SUPERFAMILY SSF103039 4 198 2.22E-57 T 23-04-2016 IPR028976 CheC-like domain CLI_RS13655 3c9f682070b8539cdcdf63b3ded740d5 199 PANTHER PTHR22617 1 169 1.8E-39 T 23-04-2016 CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 SMART SM00116 360 409 1.2 T 23-04-2016 IPR000644 CBS domain CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 SMART SM00116 296 349 2.0 T 23-04-2016 IPR000644 CBS domain CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 Pfam PF05239 PRC-barrel domain 6 71 3.1E-7 T 23-04-2016 IPR027275 PRC-barrel domain CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 SUPERFAMILY SSF158791 159 286 2.49E-29 T 23-04-2016 CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 Gene3D G3DSA:3.10.580.10 282 407 5.9E-20 T 23-04-2016 CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 SMART SM00924 186 289 6.9E-33 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 Gene3D G3DSA:1.25.60.10 155 281 3.4E-34 T 23-04-2016 CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 Pfam PF03448 MgtE intracellular N domain 186 287 1.3E-24 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 PANTHER PTHR11911:SF23 55 187 9.6E-34 T 23-04-2016 CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 PANTHER PTHR11911:SF23 262 420 9.6E-34 T 23-04-2016 CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 PANTHER PTHR11911 55 187 9.6E-34 T 23-04-2016 CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 PANTHER PTHR11911 262 420 9.6E-34 T 23-04-2016 CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 SUPERFAMILY SSF54631 288 406 1.65E-25 T 23-04-2016 CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 Pfam PF00571 CBS domain 289 345 6.8E-7 T 23-04-2016 IPR000644 CBS domain CLI_RS01180 dbaa2bc3f12fd54db5b3f45d831f87ac 421 Pfam PF00571 CBS domain 354 405 3.5E-8 T 23-04-2016 IPR000644 CBS domain CLI_RS18780 e660895ae00bdfacbe3ae3fd723eb749 351 Pfam PF01594 Domain of unknown function DUF20 12 342 7.2E-44 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CLI_RS18780 e660895ae00bdfacbe3ae3fd723eb749 351 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 11 351 1.8E-86 T 23-04-2016 IPR014227 Sporulation integral membrane protein YtvI CLI_RS18780 e660895ae00bdfacbe3ae3fd723eb749 351 PANTHER PTHR21716 1 351 6.9E-152 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CLI_RS18780 e660895ae00bdfacbe3ae3fd723eb749 351 PANTHER PTHR21716:SF9 1 351 6.9E-152 T 23-04-2016 CLI_RS03385 67fb0cdc275f077ff98b9ebfbd48b3fe 200 Gene3D G3DSA:1.25.40.10 9 162 2.4E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS03385 67fb0cdc275f077ff98b9ebfbd48b3fe 200 SUPERFAMILY SSF48452 10 148 3.37E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS06095 328ad49f11e56b7b4442bd1841057721 168 PANTHER PTHR23091:SF274 22 140 9.5E-20 T 23-04-2016 CLI_RS06095 328ad49f11e56b7b4442bd1841057721 168 PANTHER PTHR23091 22 140 9.5E-20 T 23-04-2016 CLI_RS06095 328ad49f11e56b7b4442bd1841057721 168 SUPERFAMILY SSF55729 23 143 1.71E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS06095 328ad49f11e56b7b4442bd1841057721 168 Pfam PF00583 Acetyltransferase (GNAT) family 58 134 1.5E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS06095 328ad49f11e56b7b4442bd1841057721 168 Gene3D G3DSA:3.40.630.30 47 145 1.4E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS11040 cd3598f432d5a988f012c8b6dfdec5ea 462 PANTHER PTHR30354 5 462 5.6E-241 T 23-04-2016 CLI_RS11040 cd3598f432d5a988f012c8b6dfdec5ea 462 PANTHER PTHR30354:SF0 5 462 5.6E-241 T 23-04-2016 CLI_RS11040 cd3598f432d5a988f012c8b6dfdec5ea 462 Pfam PF02447 GntP family permease 11 461 1.4E-131 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLI_RS11040 cd3598f432d5a988f012c8b6dfdec5ea 462 PIRSF PIRSF002746 6 462 4.5E-147 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLI_RS11040 cd3598f432d5a988f012c8b6dfdec5ea 462 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 12 462 1.3E-107 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLI_RS15430 5122dcb2e0bc94f71d93cc11884f336d 375 Pfam PF00534 Glycosyl transferases group 1 192 341 5.4E-35 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CLI_RS15430 5122dcb2e0bc94f71d93cc11884f336d 375 Gene3D G3DSA:3.40.50.2000 193 351 1.2E-25 T 23-04-2016 CLI_RS15430 5122dcb2e0bc94f71d93cc11884f336d 375 Pfam PF13477 Glycosyl transferase 4-like 21 157 1.2E-13 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLI_RS15430 5122dcb2e0bc94f71d93cc11884f336d 375 SUPERFAMILY SSF53756 20 374 8.24E-69 T 23-04-2016 CLI_RS15430 5122dcb2e0bc94f71d93cc11884f336d 375 PANTHER PTHR12526 2 375 1.7E-50 T 23-04-2016 CLI_RS08015 1b9916a0ed6d11c90e18abb9ad4cea1c 318 PANTHER PTHR32089 25 317 3.0E-117 T 23-04-2016 CLI_RS08015 1b9916a0ed6d11c90e18abb9ad4cea1c 318 Gene3D G3DSA:1.10.287.950 71 288 7.5E-50 T 23-04-2016 CLI_RS08015 1b9916a0ed6d11c90e18abb9ad4cea1c 318 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 80 109 3.2E-20 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS08015 1b9916a0ed6d11c90e18abb9ad4cea1c 318 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 183 212 3.2E-20 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS08015 1b9916a0ed6d11c90e18abb9ad4cea1c 318 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 154 181 3.2E-20 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS08015 1b9916a0ed6d11c90e18abb9ad4cea1c 318 PANTHER PTHR32089:SF45 25 317 3.0E-117 T 23-04-2016 CLI_RS08015 1b9916a0ed6d11c90e18abb9ad4cea1c 318 SUPERFAMILY SSF58104 40 308 1.01E-55 T 23-04-2016 CLI_RS08015 1b9916a0ed6d11c90e18abb9ad4cea1c 318 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 121 314 1.6E-39 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS08015 1b9916a0ed6d11c90e18abb9ad4cea1c 318 SMART SM00283 56 314 1.8E-40 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS04565 5e6119c96f8dc61a77113016e43954d3 136 PANTHER PTHR34821 1 136 7.5E-77 T 23-04-2016 CLI_RS04565 5e6119c96f8dc61a77113016e43954d3 136 Pfam PF04657 Putative inner membrane exporter, YdcZ 3 118 4.0E-15 T 23-04-2016 IPR006750 Putative inner membrane exporter, YdcZ CLI_RS04565 5e6119c96f8dc61a77113016e43954d3 136 PANTHER PTHR34821:SF4 1 136 7.5E-77 T 23-04-2016 CLI_RS15835 54ac790faffc4d7f7ab21437208b302a 865 Pfam PF12704 MacB-like periplasmic core domain 19 198 8.2E-9 T 23-04-2016 IPR025857 MacB-like periplasmic core domain CLI_RS15835 54ac790faffc4d7f7ab21437208b302a 865 PANTHER PTHR30489 670 864 1.6E-16 T 23-04-2016 CLI_RS15835 54ac790faffc4d7f7ab21437208b302a 865 PANTHER PTHR30489 1 189 1.6E-16 T 23-04-2016 CLI_RS15835 54ac790faffc4d7f7ab21437208b302a 865 PANTHER PTHR30489 216 652 1.6E-16 T 23-04-2016 CLI_RS15835 54ac790faffc4d7f7ab21437208b302a 865 Pfam PF02687 FtsX-like permease family 244 366 2.5E-16 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS15835 54ac790faffc4d7f7ab21437208b302a 865 Pfam PF02687 FtsX-like permease family 743 858 2.3E-14 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS14495 662cae642be281a3e3300f8378c6b9b4 96 Pfam PF01910 Thiamine-binding protein 7 94 3.3E-30 T 23-04-2016 IPR002767 Thiamine-binding protein CLI_RS14495 662cae642be281a3e3300f8378c6b9b4 96 Gene3D G3DSA:3.30.70.930 1 96 3.1E-42 T 23-04-2016 IPR029756 MTH1187/YkoF-like CLI_RS14495 662cae642be281a3e3300f8378c6b9b4 96 PANTHER PTHR33777 1 96 2.7E-27 T 23-04-2016 CLI_RS14495 662cae642be281a3e3300f8378c6b9b4 96 SUPERFAMILY SSF89957 2 95 8.11E-29 T 23-04-2016 IPR029756 MTH1187/YkoF-like CLI_RS05640 13bb716ed3b986c2e461177157587ae8 376 PANTHER PTHR11751 45 372 1.2E-110 T 23-04-2016 CLI_RS05640 13bb716ed3b986c2e461177157587ae8 376 PANTHER PTHR11751:SF388 45 372 1.2E-110 T 23-04-2016 CLI_RS05640 13bb716ed3b986c2e461177157587ae8 376 SUPERFAMILY SSF53383 53 370 4.12E-75 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS05640 13bb716ed3b986c2e461177157587ae8 376 Pfam PF00155 Aminotransferase class I and II 52 359 9.5E-44 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLI_RS05640 13bb716ed3b986c2e461177157587ae8 376 Gene3D G3DSA:3.40.640.10 54 262 8.3E-53 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS05640 13bb716ed3b986c2e461177157587ae8 376 Gene3D G3DSA:3.90.1150.10 263 373 9.5E-17 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLI_RS05640 13bb716ed3b986c2e461177157587ae8 376 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 220 233 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 CLI_RS04495 39e24d15847d4469879149252198c47e 275 Gene3D G3DSA:1.10.1660.10 5 112 2.4E-22 T 23-04-2016 CLI_RS04495 39e24d15847d4469879149252198c47e 275 PANTHER PTHR30204 1 275 1.1E-105 T 23-04-2016 CLI_RS04495 39e24d15847d4469879149252198c47e 275 PANTHER PTHR30204:SF27 1 275 1.1E-105 T 23-04-2016 CLI_RS04495 39e24d15847d4469879149252198c47e 275 SUPERFAMILY SSF46955 5 106 1.1E-22 T 23-04-2016 IPR009061 Putative DNA-binding domain CLI_RS04495 39e24d15847d4469879149252198c47e 275 Pfam PF00376 MerR family regulatory protein 6 43 4.3E-13 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS04495 39e24d15847d4469879149252198c47e 275 SMART SM00422 5 74 4.8E-17 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLI_RS13925 1af39c628f9056556897791bbe0666e4 243 Gene3D G3DSA:3.20.20.370 10 231 1.2E-56 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS13925 1af39c628f9056556897791bbe0666e4 243 PANTHER PTHR10587:SF15 18 236 6.1E-52 T 23-04-2016 CLI_RS13925 1af39c628f9056556897791bbe0666e4 243 Pfam PF01522 Polysaccharide deacetylase 37 160 2.8E-29 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS13925 1af39c628f9056556897791bbe0666e4 243 PANTHER PTHR10587 18 236 6.1E-52 T 23-04-2016 CLI_RS13925 1af39c628f9056556897791bbe0666e4 243 SUPERFAMILY SSF88713 31 228 1.46E-51 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLI_RS10390 24680ea376e1503c606377974e7c0053 224 PANTHER PTHR36834 16 224 4.4E-82 T 23-04-2016 CLI_RS10390 24680ea376e1503c606377974e7c0053 224 Pfam PF04892 VanZ like family 63 182 5.2E-24 T 23-04-2016 IPR006976 VanZ-like CLI_RS10390 24680ea376e1503c606377974e7c0053 224 PANTHER PTHR36834:SF1 16 224 4.4E-82 T 23-04-2016 CLI_RS04190 3e9f1185ca7ae5788dd582aa83fc411a 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 234 7.0E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS04190 3e9f1185ca7ae5788dd582aa83fc411a 237 SUPERFAMILY SSF46894 133 235 1.47E-27 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLI_RS04190 3e9f1185ca7ae5788dd582aa83fc411a 237 Gene3D G3DSA:1.10.10.10 137 236 3.3E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04190 3e9f1185ca7ae5788dd582aa83fc411a 237 PANTHER PTHR26402 2 237 1.7E-89 T 23-04-2016 CLI_RS04190 3e9f1185ca7ae5788dd582aa83fc411a 237 SMART SM00862 157 235 4.6E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLI_RS04190 3e9f1185ca7ae5788dd582aa83fc411a 237 SUPERFAMILY SSF52172 3 126 6.69E-38 T 23-04-2016 IPR011006 CheY-like superfamily CLI_RS04190 3e9f1185ca7ae5788dd582aa83fc411a 237 SMART SM00448 2 112 3.7E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS04190 3e9f1185ca7ae5788dd582aa83fc411a 237 Gene3D G3DSA:3.40.50.2300 2 127 5.9E-37 T 23-04-2016 CLI_RS04190 3e9f1185ca7ae5788dd582aa83fc411a 237 Pfam PF00072 Response regulator receiver domain 4 113 4.5E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CLI_RS04190 3e9f1185ca7ae5788dd582aa83fc411a 237 PANTHER PTHR26402:SF596 2 237 1.7E-89 T 23-04-2016 CLI_RS12010 30cb66de98d4d249ee47c970d68695d1 230 SUPERFAMILY SSF52096 28 215 6.26E-38 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS12010 30cb66de98d4d249ee47c970d68695d1 230 Pfam PF00574 Clp protease 38 207 1.1E-28 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLI_RS12010 30cb66de98d4d249ee47c970d68695d1 230 Gene3D G3DSA:3.90.226.10 25 207 1.5E-24 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CLI_RS18335 4c3a645849f7268ebfd901eed43a9238 598 Pfam PF07700 Haem-NO-binding 2 158 7.1E-43 T 23-04-2016 IPR011644 Heme-NO binding GO:0020037 KEGG: 00230+4.6.1.2 CLI_RS18335 4c3a645849f7268ebfd901eed43a9238 598 SUPERFAMILY SSF111126 1 181 1.67E-44 T 23-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain CLI_RS18335 4c3a645849f7268ebfd901eed43a9238 598 SUPERFAMILY SSF58104 299 596 3.92E-57 T 23-04-2016 CLI_RS18335 4c3a645849f7268ebfd901eed43a9238 598 Gene3D G3DSA:1.10.287.950 337 570 3.6E-41 T 23-04-2016 CLI_RS18335 4c3a645849f7268ebfd901eed43a9238 598 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 449 478 5.9E-5 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS18335 4c3a645849f7268ebfd901eed43a9238 598 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 336 365 5.9E-5 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLI_RS18335 4c3a645849f7268ebfd901eed43a9238 598 SMART SM00283 322 583 1.3E-35 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS18335 4c3a645849f7268ebfd901eed43a9238 598 PANTHER PTHR32089 10 587 2.6E-112 T 23-04-2016 CLI_RS18335 4c3a645849f7268ebfd901eed43a9238 598 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 399 582 9.7E-37 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS18335 4c3a645849f7268ebfd901eed43a9238 598 PANTHER PTHR32089:SF1 10 587 2.6E-112 T 23-04-2016 CLI_RS18335 4c3a645849f7268ebfd901eed43a9238 598 Gene3D G3DSA:3.90.1520.10 1 181 4.6E-56 T 23-04-2016 CLI_RS02095 67c15d978c5d91b76528067c967e7658 1396 PANTHER PTHR30032 1 358 1.4E-105 T 23-04-2016 CLI_RS02095 67c15d978c5d91b76528067c967e7658 1396 Pfam PF04122 Putative cell wall binding repeat 2 238 330 9.5E-15 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02095 67c15d978c5d91b76528067c967e7658 1396 Pfam PF04122 Putative cell wall binding repeat 2 37 123 8.0E-20 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02095 67c15d978c5d91b76528067c967e7658 1396 Pfam PF04122 Putative cell wall binding repeat 2 136 226 3.8E-13 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02095 67c15d978c5d91b76528067c967e7658 1396 PANTHER PTHR30032:SF6 1 358 1.4E-105 T 23-04-2016 CLI_RS18395 9664a86545eaf574f250a66d5e125380 405 PANTHER PTHR23501 3 404 8.7E-209 T 23-04-2016 CLI_RS18395 9664a86545eaf574f250a66d5e125380 405 Gene3D G3DSA:1.20.1250.20 21 201 2.2E-21 T 23-04-2016 CLI_RS18395 9664a86545eaf574f250a66d5e125380 405 PANTHER PTHR23501:SF79 3 404 8.7E-209 T 23-04-2016 CLI_RS18395 9664a86545eaf574f250a66d5e125380 405 Gene3D G3DSA:1.20.1250.20 233 399 5.3E-17 T 23-04-2016 CLI_RS18395 9664a86545eaf574f250a66d5e125380 405 SUPERFAMILY SSF103473 24 399 7.85E-54 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS18395 9664a86545eaf574f250a66d5e125380 405 Pfam PF07690 Major Facilitator Superfamily 38 335 1.3E-33 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS09850 1865ec068fca954633f89d229eba9c3e 283 Pfam PF12849 PBP superfamily domain 29 259 4.4E-34 T 23-04-2016 IPR024370 PBP domain CLI_RS09850 1865ec068fca954633f89d229eba9c3e 283 Gene3D G3DSA:3.40.190.10 230 270 3.8E-24 T 23-04-2016 CLI_RS09850 1865ec068fca954633f89d229eba9c3e 283 Gene3D G3DSA:3.40.190.10 45 126 3.8E-24 T 23-04-2016 CLI_RS09850 1865ec068fca954633f89d229eba9c3e 283 Gene3D G3DSA:3.40.190.10 127 229 6.9E-43 T 23-04-2016 CLI_RS09850 1865ec068fca954633f89d229eba9c3e 283 PANTHER PTHR37945 4 283 1.4E-115 T 23-04-2016 CLI_RS09850 1865ec068fca954633f89d229eba9c3e 283 SUPERFAMILY SSF53850 40 269 6.75E-33 T 23-04-2016 CLI_RS03060 3ad82f9e7e2ed65f184ce7371d586d03 145 SUPERFAMILY SSF55729 2 139 1.65E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03060 3ad82f9e7e2ed65f184ce7371d586d03 145 Gene3D G3DSA:3.40.630.30 2 134 1.5E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03060 3ad82f9e7e2ed65f184ce7371d586d03 145 Pfam PF13673 Acetyltransferase (GNAT) domain 37 135 4.2E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS06720 80295007b38b5ab0292fe5723d0474be 550 SUPERFAMILY SSF88713 371 473 9.53E-6 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLI_RS06720 80295007b38b5ab0292fe5723d0474be 550 SUPERFAMILY SSF88713 189 314 9.53E-6 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLI_RS06720 80295007b38b5ab0292fe5723d0474be 550 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 230 463 1.5E-58 T 23-04-2016 IPR018763 Protein of unknown function DUF2334 CLI_RS06720 80295007b38b5ab0292fe5723d0474be 550 Gene3D G3DSA:3.20.20.370 387 474 9.0E-4 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS06720 80295007b38b5ab0292fe5723d0474be 550 Gene3D G3DSA:3.20.20.370 244 331 9.0E-4 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLI_RS02565 1407d5a94360055be54bb0497246a2b5 189 Pfam PF04011 LemA family 10 187 5.5E-73 T 23-04-2016 IPR007156 LemA CLI_RS02565 1407d5a94360055be54bb0497246a2b5 189 PANTHER PTHR34478 2 189 2.7E-95 T 23-04-2016 CLI_RS02565 1407d5a94360055be54bb0497246a2b5 189 PANTHER PTHR34478:SF2 2 189 2.7E-95 T 23-04-2016 CLI_RS02565 1407d5a94360055be54bb0497246a2b5 189 Gene3D G3DSA:1.20.1440.20 17 187 7.2E-68 T 23-04-2016 IPR023353 LemA-like domain CLI_RS02565 1407d5a94360055be54bb0497246a2b5 189 SUPERFAMILY SSF140478 29 176 2.22E-55 T 23-04-2016 IPR023353 LemA-like domain CLI_RS10095 fb5e7f23b6114e59a5613ec38b3b9e0f 135 Pfam PF11208 Protein of unknown function (DUF2992) 4 135 1.5E-51 T 23-04-2016 IPR016787 Uncharacterised conserved protein UCP021328 CLI_RS10095 fb5e7f23b6114e59a5613ec38b3b9e0f 135 PIRSF PIRSF021328 1 135 4.3E-46 T 23-04-2016 IPR016787 Uncharacterised conserved protein UCP021328 CLI_RS07355 ddeb381f6914fee7c2f975d2ff753479 219 PANTHER PTHR30614 1 219 3.4E-92 T 23-04-2016 CLI_RS07355 ddeb381f6914fee7c2f975d2ff753479 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 215 2.1E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07355 ddeb381f6914fee7c2f975d2ff753479 219 SUPERFAMILY SSF161098 13 201 5.36E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07355 ddeb381f6914fee7c2f975d2ff753479 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 110 8.0E-30 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CLI_RS07355 ddeb381f6914fee7c2f975d2ff753479 219 Gene3D G3DSA:1.10.3720.10 12 217 5.1E-48 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS09925 d4f182b9700b7534456a9fa2d91bfd1c 122 Pfam PF01042 Endoribonuclease L-PSP 7 121 4.6E-40 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family CLI_RS09925 d4f182b9700b7534456a9fa2d91bfd1c 122 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 122 7.3E-50 T 23-04-2016 IPR006056 RidA family CLI_RS09925 d4f182b9700b7534456a9fa2d91bfd1c 122 PANTHER PTHR11803:SF15 1 122 2.6E-82 T 23-04-2016 CLI_RS09925 d4f182b9700b7534456a9fa2d91bfd1c 122 Gene3D G3DSA:3.30.1330.40 2 121 2.6E-45 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLI_RS09925 d4f182b9700b7534456a9fa2d91bfd1c 122 SUPERFAMILY SSF55298 2 122 3.3E-40 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLI_RS09925 d4f182b9700b7534456a9fa2d91bfd1c 122 PANTHER PTHR11803 1 122 2.6E-82 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family CLI_RS07265 fcf8e05459e3658bba9b5752bb9f830d 325 Gene3D G3DSA:3.30.565.10 147 324 9.0E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS07265 fcf8e05459e3658bba9b5752bb9f830d 325 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 219 324 9.4E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS07265 fcf8e05459e3658bba9b5752bb9f830d 325 SMART SM00387 216 325 3.7E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS07265 fcf8e05459e3658bba9b5752bb9f830d 325 SUPERFAMILY SSF55874 176 324 1.96E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS07265 fcf8e05459e3658bba9b5752bb9f830d 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 254 268 1.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS07265 fcf8e05459e3658bba9b5752bb9f830d 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 272 282 1.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS07265 fcf8e05459e3658bba9b5752bb9f830d 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 325 1.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS07265 fcf8e05459e3658bba9b5752bb9f830d 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 306 1.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS07265 fcf8e05459e3658bba9b5752bb9f830d 325 PANTHER PTHR24423:SF539 111 325 3.1E-81 T 23-04-2016 CLI_RS07265 fcf8e05459e3658bba9b5752bb9f830d 325 PANTHER PTHR24423 111 325 3.1E-81 T 23-04-2016 CLI_RS18425 0982b2f49b4fb85d90ec4a98d1d5e514 253 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 10 249 5.7E-9 T 23-04-2016 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 CLI_RS18425 0982b2f49b4fb85d90ec4a98d1d5e514 253 TIGRFAM TIGR04482 D_pro_red_PrdD: proline reductase cluster protein PrdD 9 252 7.2E-109 T 23-04-2016 IPR031000 Proline reductase cluster protein PrdD CLI_RS00450 ec6eee914919058cf4df8e3a45eaeff9 81 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 1.0E-10 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 CLI_RS00450 ec6eee914919058cf4df8e3a45eaeff9 81 PANTHER PTHR36432:SF4 2 81 1.3E-48 T 23-04-2016 CLI_RS00450 ec6eee914919058cf4df8e3a45eaeff9 81 SUPERFAMILY SSF89447 1 53 2.75E-16 T 23-04-2016 CLI_RS00450 ec6eee914919058cf4df8e3a45eaeff9 81 PANTHER PTHR36432 2 81 1.3E-48 T 23-04-2016 CLI_RS00450 ec6eee914919058cf4df8e3a45eaeff9 81 Gene3D G3DSA:2.10.260.10 1 52 4.2E-30 T 23-04-2016 CLI_RS00450 ec6eee914919058cf4df8e3a45eaeff9 81 SMART SM00966 8 51 3.4E-9 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 CLI_RS00450 ec6eee914919058cf4df8e3a45eaeff9 81 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 3.6E-10 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 CLI_RS08930 dc844eec072f2a7594ecfb49ba6392ed 389 SMART SM00331 4 218 9.0E-4 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLI_RS08930 dc844eec072f2a7594ecfb49ba6392ed 389 SUPERFAMILY SSF81606 5 217 3.14E-10 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLI_RS08930 dc844eec072f2a7594ecfb49ba6392ed 389 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 32 216 1.9E-14 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLI_RS08325 19f84ea5b95a666eaba302dca3de6d0a 226 PIRSF PIRSF037984 1 222 9.6E-71 T 23-04-2016 IPR017342 S-adenosyl-L-methionine dependent methionine synthase, predicted CLI_RS08325 19f84ea5b95a666eaba302dca3de6d0a 226 Gene3D G3DSA:3.10.196.10 145 193 1.9E-7 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 CLI_RS08325 19f84ea5b95a666eaba302dca3de6d0a 226 SUPERFAMILY SSF56507 13 193 2.88E-29 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 CLI_RS05805 30a488d51290d50bcd43becf2b551f32 287 Gene3D G3DSA:1.10.3720.10 3 276 1.0E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS05805 30a488d51290d50bcd43becf2b551f32 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 275 4.2E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS05805 30a488d51290d50bcd43becf2b551f32 287 PANTHER PTHR30193 1 285 3.6E-46 T 23-04-2016 CLI_RS05805 30a488d51290d50bcd43becf2b551f32 287 SUPERFAMILY SSF161098 6 277 2.9E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS13270 52325036b9da22e98479b0edcdfea742 135 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 13 82 1.9E-17 T 23-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CLI_RS13270 52325036b9da22e98479b0edcdfea742 135 Pfam PF04347 Flagellar biosynthesis protein, FliO 30 97 8.6E-9 T 23-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CLI_RS17645 d2e3eb09212ff76be84dbc2f1c605f1d 280 PANTHER PTHR30389 1 280 7.2E-177 T 23-04-2016 CLI_RS17645 d2e3eb09212ff76be84dbc2f1c605f1d 280 PANTHER PTHR30389:SF4 1 280 7.2E-177 T 23-04-2016 CLI_RS17645 d2e3eb09212ff76be84dbc2f1c605f1d 280 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 9 279 1.6E-99 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CLI_RS17645 d2e3eb09212ff76be84dbc2f1c605f1d 280 Pfam PF05681 Fumarate hydratase (Fumerase) 11 277 8.2E-117 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CLI_RS16425 28a13732785e9ab892843b39ea1d9d22 192 SUPERFAMILY SSF52540 1 190 5.52E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16425 28a13732785e9ab892843b39ea1d9d22 192 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 6 189 7.3E-76 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 CLI_RS16425 28a13732785e9ab892843b39ea1d9d22 192 Gene3D G3DSA:3.40.50.300 3 190 3.4E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16425 28a13732785e9ab892843b39ea1d9d22 192 PANTHER PTHR11649 1 190 6.4E-59 T 23-04-2016 CLI_RS16425 28a13732785e9ab892843b39ea1d9d22 192 Pfam PF01926 50S ribosome-binding GTPase 25 140 1.3E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CLI_RS16425 28a13732785e9ab892843b39ea1d9d22 192 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 190 28.114 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 Pfam PF13174 Tetratricopeptide repeat 373 403 0.12 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 PANTHER PTHR23083 103 169 2.0E-14 T 23-04-2016 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 PANTHER PTHR23083 275 410 2.0E-14 T 23-04-2016 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 PANTHER PTHR23083 9 54 2.0E-14 T 23-04-2016 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 SMART SM00028 7 40 21.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 SMART SM00028 123 156 4.6E-9 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 Pfam PF00515 Tetratricopeptide repeat 124 156 1.2E-10 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 Gene3D G3DSA:1.25.40.10 9 159 2.9E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 Gene3D G3DSA:1.25.40.10 265 385 2.9E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 SUPERFAMILY SSF48452 297 360 5.88E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 SUPERFAMILY SSF48452 9 56 5.88E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 SUPERFAMILY SSF48452 105 156 5.88E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS17615 d402f72b27b8a661b78c7d387e0bae86 417 SUPERFAMILY SSF48452 76 169 5.55E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS04525 0f6fe83749ef3d0c9d04b4aff3031497 209 Pfam PF00881 Nitroreductase family 8 184 6.6E-24 T 23-04-2016 IPR029479 Nitroreductase CLI_RS04525 0f6fe83749ef3d0c9d04b4aff3031497 209 PANTHER PTHR23026 1 209 1.4E-135 T 23-04-2016 CLI_RS04525 0f6fe83749ef3d0c9d04b4aff3031497 209 PANTHER PTHR23026:SF108 1 209 1.4E-135 T 23-04-2016 CLI_RS04525 0f6fe83749ef3d0c9d04b4aff3031497 209 Gene3D G3DSA:3.40.109.10 2 205 3.2E-59 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS04525 0f6fe83749ef3d0c9d04b4aff3031497 209 SUPERFAMILY SSF55469 4 203 4.06E-46 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CLI_RS10010 e66df8f39e410a6188a5c5c170d47f1b 370 PANTHER PTHR35789 4 370 5.1E-55 T 23-04-2016 CLI_RS10010 e66df8f39e410a6188a5c5c170d47f1b 370 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 205 366 5.6E-26 T 23-04-2016 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLI_RS10010 e66df8f39e410a6188a5c5c170d47f1b 370 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 10 367 1.3E-51 T 23-04-2016 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLI_RS10010 e66df8f39e410a6188a5c5c170d47f1b 370 PANTHER PTHR35789:SF1 4 370 5.1E-55 T 23-04-2016 CLI_RS17455 c4f29955b1b2b93c128574508f411498 441 PANTHER PTHR33451:SF5 2 439 9.5E-249 T 23-04-2016 CLI_RS17455 c4f29955b1b2b93c128574508f411498 441 Pfam PF03553 Na+/H+ antiporter family 58 213 2.1E-17 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CLI_RS17455 c4f29955b1b2b93c128574508f411498 441 Pfam PF03553 Na+/H+ antiporter family 234 425 1.8E-12 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CLI_RS17455 c4f29955b1b2b93c128574508f411498 441 PANTHER PTHR33451 2 439 9.5E-249 T 23-04-2016 CLI_RS17455 c4f29955b1b2b93c128574508f411498 441 PRINTS PR00173 Glutamate-aspartate symporter signature 200 220 7.6E-5 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS17455 c4f29955b1b2b93c128574508f411498 441 PRINTS PR00173 Glutamate-aspartate symporter signature 380 399 7.6E-5 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS17455 c4f29955b1b2b93c128574508f411498 441 PRINTS PR00173 Glutamate-aspartate symporter signature 151 171 7.6E-5 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS17455 c4f29955b1b2b93c128574508f411498 441 PRINTS PR00173 Glutamate-aspartate symporter signature 229 254 7.6E-5 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS16990 284f82828068a477c13b2c147f23fa25 152 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 124 1.4E-37 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CLI_RS16990 284f82828068a477c13b2c147f23fa25 152 Gene3D G3DSA:3.40.50.300 1 146 2.0E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16990 284f82828068a477c13b2c147f23fa25 152 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 127 2.7E-38 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CLI_RS16990 284f82828068a477c13b2c147f23fa25 152 SUPERFAMILY SSF52540 18 121 1.55E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16990 284f82828068a477c13b2c147f23fa25 152 PANTHER PTHR33540 1 151 6.7E-51 T 23-04-2016 CLI_RS16990 284f82828068a477c13b2c147f23fa25 152 PANTHER PTHR33540:SF2 1 151 6.7E-51 T 23-04-2016 CLI_RS09550 2be659d3ba949bfb3213180d886c2669 174 Pfam PF12685 SpoIIIAH-like protein 42 170 1.1E-29 T 23-04-2016 IPR024232 Stage III sporulation protein AH-like CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PANTHER PTHR12737 5 94 5.4E-127 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PANTHER PTHR12737 304 403 5.4E-127 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PANTHER PTHR12737 147 286 5.4E-127 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PIRSF PIRSF006356 1 402 3.2E-164 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 Hamap MF_00242 Arginine deiminase [arcA]. 4 402 45.109 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 Gene3D G3DSA:3.75.10.10 148 402 2.3E-129 T 23-04-2016 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 Gene3D G3DSA:3.75.10.10 4 70 2.3E-129 T 23-04-2016 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PRINTS PR01466 Bacterial arginine deiminase signature 381 399 9.5E-59 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PRINTS PR01466 Bacterial arginine deiminase signature 358 372 9.5E-59 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PRINTS PR01466 Bacterial arginine deiminase signature 338 355 9.5E-59 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PRINTS PR01466 Bacterial arginine deiminase signature 147 165 9.5E-59 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PRINTS PR01466 Bacterial arginine deiminase signature 5 25 9.5E-59 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PRINTS PR01466 Bacterial arginine deiminase signature 175 190 9.5E-59 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 Pfam PF02274 Amidinotransferase 21 399 3.2E-89 T 23-04-2016 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 TIGRFAM TIGR01078 arcA: arginine deiminase 7 401 2.1E-160 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 SUPERFAMILY SSF55909 5 402 1.08E-128 T 23-04-2016 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PANTHER PTHR12737:SF13 5 94 5.4E-127 T 23-04-2016 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PANTHER PTHR12737:SF13 304 403 5.4E-127 T 23-04-2016 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 PANTHER PTHR12737:SF13 147 286 5.4E-127 T 23-04-2016 CLI_RS00460 3bf6c091e89de770581d2e32b1c90e04 403 Gene3D G3DSA:1.10.3930.10 71 147 2.7E-24 T 23-04-2016 CLI_RS13810 005e3f22c097c84691e82b8675b80f63 429 Pfam PF16472 Domain of unknown function (DUF5050) 96 369 1.3E-43 T 23-04-2016 IPR032485 Domain of unknown function DUF5050 CLI_RS13810 005e3f22c097c84691e82b8675b80f63 429 SUPERFAMILY SSF69304 281 402 5.23E-7 T 23-04-2016 CLI_RS13810 005e3f22c097c84691e82b8675b80f63 429 SUPERFAMILY SSF69304 108 310 1.22E-11 T 23-04-2016 CLI_RS13810 005e3f22c097c84691e82b8675b80f63 429 Gene3D G3DSA:2.120.10.30 97 229 7.3E-10 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS13810 005e3f22c097c84691e82b8675b80f63 429 Gene3D G3DSA:2.120.10.30 281 404 4.5E-11 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS11150 efd2ce0ea56318950f5584e1d1964631 538 PANTHER PTHR30032:SF1 1 500 9.0E-146 T 23-04-2016 CLI_RS11150 efd2ce0ea56318950f5584e1d1964631 538 Pfam PF04122 Putative cell wall binding repeat 2 135 222 6.5E-16 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS11150 efd2ce0ea56318950f5584e1d1964631 538 Pfam PF04122 Putative cell wall binding repeat 2 240 325 5.3E-21 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS11150 efd2ce0ea56318950f5584e1d1964631 538 Pfam PF04122 Putative cell wall binding repeat 2 31 120 8.6E-19 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS11150 efd2ce0ea56318950f5584e1d1964631 538 PANTHER PTHR30032 1 500 9.0E-146 T 23-04-2016 CLI_RS10875 2f1aa62cbd6156cec912e7848b1af0bb 581 Pfam PF12469 CRISPR-associated protein 4 79 5.6E-10 T 23-04-2016 IPR024615 CRISPR-associated protein Crm2, N-terminal CLI_RS10875 2f1aa62cbd6156cec912e7848b1af0bb 581 TIGRFAM TIGR02577 cas_TM1794_Cmr2: CRISPR-associated protein Cas10/Cmr2, subtype III-B 118 421 1.1E-24 T 23-04-2016 IPR013407 CRISPR-associated protein Crm2 CLI_RS11655 b97b7730da032659078b15f9c166a285 80 Pfam PF01381 Helix-turn-helix 7 61 2.4E-17 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS11655 b97b7730da032659078b15f9c166a285 80 SUPERFAMILY SSF47413 3 70 8.31E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS11655 b97b7730da032659078b15f9c166a285 80 PANTHER PTHR10245 3 70 2.6E-18 T 23-04-2016 CLI_RS11655 b97b7730da032659078b15f9c166a285 80 Gene3D G3DSA:1.10.260.40 3 64 5.9E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS11655 b97b7730da032659078b15f9c166a285 80 SMART SM00530 6 61 1.1E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS18585 7c324391d831efce01a8ccb851baaa1a 158 SMART SM00347 28 128 2.1E-15 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS18585 7c324391d831efce01a8ccb851baaa1a 158 Pfam PF01047 MarR family 35 93 5.5E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS18585 7c324391d831efce01a8ccb851baaa1a 158 Gene3D G3DSA:1.10.10.10 8 145 1.4E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18585 7c324391d831efce01a8ccb851baaa1a 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 9.9E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS18585 7c324391d831efce01a8ccb851baaa1a 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 9.9E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS18585 7c324391d831efce01a8ccb851baaa1a 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 9.9E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS18585 7c324391d831efce01a8ccb851baaa1a 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 9.9E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLI_RS18585 7c324391d831efce01a8ccb851baaa1a 158 SUPERFAMILY SSF46785 11 145 2.45E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18585 7c324391d831efce01a8ccb851baaa1a 158 PANTHER PTHR33164 34 152 9.2E-22 T 23-04-2016 CLI_RS05570 b5b642ca7b3e75a924b088823ebdba2b 331 PANTHER PTHR40064:SF1 2 328 1.3E-142 T 23-04-2016 CLI_RS05570 b5b642ca7b3e75a924b088823ebdba2b 331 Pfam PF06081 Aromatic acid exporter family member 1 3 142 6.4E-49 T 23-04-2016 IPR010343 Aromatic acid exporter family member 1 CLI_RS05570 b5b642ca7b3e75a924b088823ebdba2b 331 PANTHER PTHR40064 2 328 1.3E-142 T 23-04-2016 CLI_RS05570 b5b642ca7b3e75a924b088823ebdba2b 331 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 146 311 4.9E-54 T 23-04-2016 IPR021062 Putative aromatic acid exporter, C-terminal CLI_RS03800 60cc7885a500f4e4841119e59b4938e7 133 PANTHER PTHR24220:SF499 6 129 7.3E-40 T 23-04-2016 CLI_RS03800 60cc7885a500f4e4841119e59b4938e7 133 PANTHER PTHR24220 6 129 7.3E-40 T 23-04-2016 CLI_RS03800 60cc7885a500f4e4841119e59b4938e7 133 Gene3D G3DSA:3.40.50.300 3 111 5.3E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03800 60cc7885a500f4e4841119e59b4938e7 133 SUPERFAMILY SSF52540 3 107 2.66E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03800 60cc7885a500f4e4841119e59b4938e7 133 Pfam PF00005 ABC transporter 19 129 2.5E-13 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLI_RS18115 410b1cabf910a84581aa68594911979d 323 PIRSF PIRSF006621 1 321 1.3E-106 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLI_RS18115 410b1cabf910a84581aa68594911979d 323 PANTHER PTHR11082 1 322 2.2E-148 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLI_RS18115 410b1cabf910a84581aa68594911979d 323 Gene3D G3DSA:3.20.20.70 8 245 1.8E-87 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS18115 410b1cabf910a84581aa68594911979d 323 PANTHER PTHR11082:SF25 1 322 2.2E-148 T 23-04-2016 CLI_RS18115 410b1cabf910a84581aa68594911979d 323 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 8.4E-114 T 23-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CLI_RS18115 410b1cabf910a84581aa68594911979d 323 Pfam PF01207 Dihydrouridine synthase (Dus) 14 313 1.6E-95 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLI_RS18115 410b1cabf910a84581aa68594911979d 323 SUPERFAMILY SSF51395 10 317 4.39E-88 T 23-04-2016 CLI_RS18115 410b1cabf910a84581aa68594911979d 323 Gene3D G3DSA:1.10.1200.80 251 320 1.9E-20 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CLI_RS18115 410b1cabf910a84581aa68594911979d 323 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLI_RS13935 3f90f105493ea1fa650573a98ba2978a 55 Pfam PF13451 Probable zinc-ribbon domain 3 48 4.8E-26 T 23-04-2016 IPR025306 Probable zinc-binding domain CLI_RS16145 b5824848a7549ba49dd79180f8979fd4 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 265 6.6E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS16145 b5824848a7549ba49dd79180f8979fd4 267 Gene3D G3DSA:1.10.3720.10 66 261 2.2E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS16145 b5824848a7549ba49dd79180f8979fd4 267 SUPERFAMILY SSF161098 68 254 2.09E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS16145 b5824848a7549ba49dd79180f8979fd4 267 PANTHER PTHR30151 3 257 4.5E-177 T 23-04-2016 CLI_RS16145 b5824848a7549ba49dd79180f8979fd4 267 PANTHER PTHR30151:SF19 3 257 4.5E-177 T 23-04-2016 CLI_RS07935 e435b5c7bed6f0c4cbb88e6264763f37 146 Pfam PF04657 Putative inner membrane exporter, YdcZ 2 135 1.1E-25 T 23-04-2016 IPR006750 Putative inner membrane exporter, YdcZ CLI_RS07935 e435b5c7bed6f0c4cbb88e6264763f37 146 PANTHER PTHR34821:SF4 1 143 8.2E-50 T 23-04-2016 CLI_RS07935 e435b5c7bed6f0c4cbb88e6264763f37 146 PANTHER PTHR34821 1 143 8.2E-50 T 23-04-2016 CLI_RS10355 2ae7f3a11a7ecd0f72368fcb1041e16d 299 SUPERFAMILY SSF53448 9 256 2.73E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10355 2ae7f3a11a7ecd0f72368fcb1041e16d 299 PANTHER PTHR22916 4 189 1.3E-40 T 23-04-2016 CLI_RS10355 2ae7f3a11a7ecd0f72368fcb1041e16d 299 PANTHER PTHR22916:SF26 4 189 1.3E-40 T 23-04-2016 CLI_RS10355 2ae7f3a11a7ecd0f72368fcb1041e16d 299 Gene3D G3DSA:3.90.550.10 9 202 9.9E-23 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10355 2ae7f3a11a7ecd0f72368fcb1041e16d 299 Pfam PF00535 Glycosyl transferase family 2 9 164 8.3E-13 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CLI_RS08565 ed164b78faca6dd091fa75a9da2d270c 316 Pfam PF06207 Protein of unknown function (DUF1002) 39 258 5.0E-85 T 23-04-2016 IPR009343 Protein of unknown function DUF1002 CLI_RS01800 6cc0c8b3a72d3f812df435a35f983465 285 Pfam PF02673 Bacitracin resistance protein BacA 12 270 2.0E-72 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CLI_RS01800 6cc0c8b3a72d3f812df435a35f983465 285 PANTHER PTHR30622 4 284 9.7E-131 T 23-04-2016 CLI_RS01800 6cc0c8b3a72d3f812df435a35f983465 285 PANTHER PTHR30622:SF3 4 284 9.7E-131 T 23-04-2016 CLI_RS01800 6cc0c8b3a72d3f812df435a35f983465 285 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 6 276 16.786 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CLI_RS01800 6cc0c8b3a72d3f812df435a35f983465 285 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 12 268 2.2E-71 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CLI_RS14685 8ca29ee2d0f871719d50defb1ba78325 98 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 9 91 2.7E-34 T 23-04-2016 IPR022477 Sporulation protein YqfC CLI_RS14685 8ca29ee2d0f871719d50defb1ba78325 98 Pfam PF07873 YabP family 27 90 1.8E-14 T 23-04-2016 IPR022476 Sporulation protein YabP/YqfC CLI_RS00530 8200cadafcd76b0982baa1c407677984 181 Gene3D G3DSA:3.40.1360.20 1 121 1.5E-38 T 23-04-2016 CLI_RS00530 8200cadafcd76b0982baa1c407677984 181 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 173 1.5E-46 T 23-04-2016 IPR004466 Ribonuclease M5 GO:0043822 CLI_RS00530 8200cadafcd76b0982baa1c407677984 181 PANTHER PTHR39156 1 181 1.2E-88 T 23-04-2016 CLI_RS00530 8200cadafcd76b0982baa1c407677984 181 Hamap MF_01469 Ribonuclease M5 [rnmV]. 2 176 29.237 T 23-04-2016 IPR004466 Ribonuclease M5 GO:0043822 CLI_RS00530 8200cadafcd76b0982baa1c407677984 181 Pfam PF01751 Toprim domain 4 80 3.7E-8 T 23-04-2016 IPR006171 Toprim domain CLI_RS00530 8200cadafcd76b0982baa1c407677984 181 SUPERFAMILY SSF110455 1 114 3.92E-32 T 23-04-2016 CLI_RS00530 8200cadafcd76b0982baa1c407677984 181 SMART SM00493 3 76 1.2E-8 T 23-04-2016 IPR006171 Toprim domain CLI_RS00530 8200cadafcd76b0982baa1c407677984 181 Pfam PF13331 Domain of unknown function (DUF4093) 89 173 1.8E-27 T 23-04-2016 IPR025156 Ribonuclease M5, C-terminal domain CLI_RS05210 c6093fae87c0bfd73106dd98d1877001 143 PANTHER PTHR33746:SF2 11 143 7.8E-94 T 23-04-2016 CLI_RS05210 c6093fae87c0bfd73106dd98d1877001 143 Pfam PF02915 Rubrerythrin 28 79 1.3E-7 T 23-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLI_RS05210 c6093fae87c0bfd73106dd98d1877001 143 Pfam PF02915 Rubrerythrin 85 142 2.0E-5 T 23-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLI_RS05210 c6093fae87c0bfd73106dd98d1877001 143 PANTHER PTHR33746 11 143 7.8E-94 T 23-04-2016 CLI_RS05210 c6093fae87c0bfd73106dd98d1877001 143 Gene3D G3DSA:1.20.1260.10 17 141 1.6E-34 T 23-04-2016 IPR012347 Ferritin-related CLI_RS05210 c6093fae87c0bfd73106dd98d1877001 143 SUPERFAMILY SSF47240 18 142 1.32E-30 T 23-04-2016 IPR009078 Ferritin-like superfamily CLI_RS06365 5bf50398f0f474cf29c27d0ef1ef4842 53 Pfam PF11007 Spore coat associated protein JA (CotJA) 15 49 4.9E-16 T 23-04-2016 IPR020256 Spore coat protein CotJA CLI_RS05795 ba3c3eef169da96cbc18954b17288d1d 325 Pfam PF11185 Protein of unknown function (DUF2971) 124 242 3.0E-9 T 23-04-2016 IPR021352 Protein of unknown function DUF2971 CLI_RS08370 037d0acbe668c76a44b3d4322675e83d 331 Pfam PF01513 ATP-NAD kinase 3 224 8.7E-16 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLI_RS08370 037d0acbe668c76a44b3d4322675e83d 331 SUPERFAMILY SSF111331 86 162 1.15E-8 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain CLI_RS08370 037d0acbe668c76a44b3d4322675e83d 331 Gene3D G3DSA:3.40.50.10330 2 134 2.7E-6 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLI_RS08370 037d0acbe668c76a44b3d4322675e83d 331 PIRSF PIRSF018567 1 331 7.2E-129 T 23-04-2016 IPR011391 Acetoin catabolism kinase AcoX UniPathway: UPA00040 CLI_RS08880 3256d68dbda7b4871ae6444e5367e531 278 Gene3D G3DSA:3.60.110.10 1 275 7.7E-91 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CLI_RS08880 3256d68dbda7b4871ae6444e5367e531 278 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 23-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site CLI_RS08880 3256d68dbda7b4871ae6444e5367e531 278 PANTHER PTHR23088 1 277 2.8E-119 T 23-04-2016 CLI_RS08880 3256d68dbda7b4871ae6444e5367e531 278 PANTHER PTHR23088:SF30 1 277 2.8E-119 T 23-04-2016 CLI_RS08880 3256d68dbda7b4871ae6444e5367e531 278 SUPERFAMILY SSF56317 1 267 4.71E-80 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CLI_RS08880 3256d68dbda7b4871ae6444e5367e531 278 Pfam PF00795 Carbon-nitrogen hydrolase 5 258 4.5E-62 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CLI_RS12285 e23883f05768646d4889090b1a2a1899 292 Pfam PF01925 Sulfite exporter TauE/SafE 172 285 3.6E-8 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS12285 e23883f05768646d4889090b1a2a1899 292 Pfam PF01925 Sulfite exporter TauE/SafE 5 148 5.0E-10 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS12285 e23883f05768646d4889090b1a2a1899 292 PANTHER PTHR30269 33 288 6.6E-83 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CLI_RS12285 e23883f05768646d4889090b1a2a1899 292 PANTHER PTHR30269:SF15 33 288 6.6E-83 T 23-04-2016 CLI_RS01400 cd7988f925e05fecdd0ac4427fed0b96 218 Gene3D G3DSA:2.60.120.10 93 217 4.8E-45 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS01400 cd7988f925e05fecdd0ac4427fed0b96 218 SUPERFAMILY SSF51182 79 198 2.84E-24 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS01400 cd7988f925e05fecdd0ac4427fed0b96 218 Pfam PF07883 Cupin domain 118 193 7.0E-13 T 23-04-2016 IPR013096 Cupin 2, conserved barrel CLI_RS08855 dd0b012228f24fd307b9b16583283b10 467 Pfam PF13641 Glycosyltransferase like family 2 48 271 1.2E-29 T 23-04-2016 CLI_RS08855 dd0b012228f24fd307b9b16583283b10 467 Gene3D G3DSA:3.90.550.10 47 292 1.9E-18 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS08855 dd0b012228f24fd307b9b16583283b10 467 PANTHER PTHR10859:SF96 31 393 7.0E-172 T 23-04-2016 CLI_RS08855 dd0b012228f24fd307b9b16583283b10 467 SUPERFAMILY SSF53448 46 324 4.69E-44 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS08855 dd0b012228f24fd307b9b16583283b10 467 PANTHER PTHR10859 31 393 7.0E-172 T 23-04-2016 CLI_RS07990 abedef426325fc36ee5687d7746b415d 143 PANTHER PTHR12589 1 139 3.2E-50 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CLI_RS07990 abedef426325fc36ee5687d7746b415d 143 SUPERFAMILY SSF55620 1 138 9.45E-34 T 23-04-2016 CLI_RS07990 abedef426325fc36ee5687d7746b415d 143 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 139 7.4E-33 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CLI_RS07990 abedef426325fc36ee5687d7746b415d 143 Gene3D G3DSA:3.30.479.10 1 139 4.5E-36 T 23-04-2016 CLI_RS07990 abedef426325fc36ee5687d7746b415d 143 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 116 1.7E-29 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CLI_RS07990 abedef426325fc36ee5687d7746b415d 143 PANTHER PTHR12589:SF5 1 139 3.2E-50 T 23-04-2016 CLI_RS17365 c217806ef5b7a32db5c62cc116436093 145 PANTHER PTHR15715 23 141 1.4E-23 T 23-04-2016 CLI_RS17365 c217806ef5b7a32db5c62cc116436093 145 SUPERFAMILY SSF49879 66 144 7.27E-24 T 23-04-2016 IPR008984 SMAD/FHA domain GO:0005515 CLI_RS17365 c217806ef5b7a32db5c62cc116436093 145 Pfam PF00498 FHA domain 73 137 6.7E-17 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CLI_RS17365 c217806ef5b7a32db5c62cc116436093 145 SMART SM00240 72 122 4.1E-11 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CLI_RS17365 c217806ef5b7a32db5c62cc116436093 145 Gene3D G3DSA:2.60.200.20 54 143 2.3E-24 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CLI_RS11950 9d71d23dba6e6c504f16adb7abe22035 73 PANTHER PTHR37304 1 73 2.5E-30 T 23-04-2016 CLI_RS11950 9d71d23dba6e6c504f16adb7abe22035 73 PANTHER PTHR37304:SF1 1 73 2.5E-30 T 23-04-2016 CLI_RS11950 9d71d23dba6e6c504f16adb7abe22035 73 Pfam PF04070 Domain of unknown function (DUF378) 6 63 1.7E-19 T 23-04-2016 IPR007211 Protein of unknown function DUF378 CLI_RS07405 70e0deb30a621115bd78ab4b34926206 187 Pfam PF13668 Ferritin-like domain 65 184 5.8E-6 T 23-04-2016 CLI_RS07405 70e0deb30a621115bd78ab4b34926206 187 Gene3D G3DSA:1.20.1260.10 63 186 5.1E-16 T 23-04-2016 IPR012347 Ferritin-related CLI_RS07405 70e0deb30a621115bd78ab4b34926206 187 SUPERFAMILY SSF47240 60 185 1.92E-17 T 23-04-2016 IPR009078 Ferritin-like superfamily CLI_RS06380 fb7e56714c41d25056815655b6694334 339 PANTHER PTHR11219 146 338 3.9E-62 T 23-04-2016 CLI_RS06380 fb7e56714c41d25056815655b6694334 339 Pfam PF09992 Phosphodiester glycosidase 157 337 5.2E-48 T 23-04-2016 IPR018711 Phosphodiester glycosidase CLI_RS06380 fb7e56714c41d25056815655b6694334 339 PANTHER PTHR11219:SF45 146 338 3.9E-62 T 23-04-2016 CLI_RS09650 1b10d44084e2688056fe70701df3452e 396 PANTHER PTHR30012 2 396 8.1E-133 T 23-04-2016 CLI_RS09650 1b10d44084e2688056fe70701df3452e 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 361 375 2.7E-12 T 23-04-2016 IPR003004 GspF/PilC family CLI_RS09650 1b10d44084e2688056fe70701df3452e 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 2.7E-12 T 23-04-2016 IPR003004 GspF/PilC family CLI_RS09650 1b10d44084e2688056fe70701df3452e 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 377 396 2.7E-12 T 23-04-2016 IPR003004 GspF/PilC family CLI_RS09650 1b10d44084e2688056fe70701df3452e 396 PANTHER PTHR30012:SF0 2 396 8.1E-133 T 23-04-2016 CLI_RS09650 1b10d44084e2688056fe70701df3452e 396 Pfam PF00482 Type II secretion system (T2SS), protein F 64 186 5.5E-19 T 23-04-2016 IPR018076 Type II secretion system F domain CLI_RS09650 1b10d44084e2688056fe70701df3452e 396 Pfam PF00482 Type II secretion system (T2SS), protein F 266 388 1.4E-20 T 23-04-2016 IPR018076 Type II secretion system F domain CLI_RS12915 47d3d1181626e09c92b50c831203177e 449 PANTHER PTHR11206 1 448 4.8E-221 T 23-04-2016 CLI_RS12915 47d3d1181626e09c92b50c831203177e 449 Pfam PF01554 MatE 262 408 4.7E-17 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS12915 47d3d1181626e09c92b50c831203177e 449 Pfam PF01554 MatE 30 190 1.4E-19 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS12915 47d3d1181626e09c92b50c831203177e 449 PIRSF PIRSF006603 5 448 2.6E-79 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS12915 47d3d1181626e09c92b50c831203177e 449 PANTHER PTHR11206:SF175 1 448 4.8E-221 T 23-04-2016 CLI_RS12915 47d3d1181626e09c92b50c831203177e 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 31 418 4.6E-52 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CLI_RS15180 d77fbb33eb337676c386603416babe2b 483 SUPERFAMILY SSF52266 209 314 9.01E-10 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CLI_RS15180 d77fbb33eb337676c386603416babe2b 483 SUPERFAMILY SSF52266 50 121 9.01E-10 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CLI_RS12105 c426fe6cdc0c41006da024ec3103c7e2 326 Pfam PF01594 Domain of unknown function DUF20 15 325 1.5E-33 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CLI_RS12105 c426fe6cdc0c41006da024ec3103c7e2 326 PANTHER PTHR21716 1 326 1.7E-145 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CLI_RS12105 c426fe6cdc0c41006da024ec3103c7e2 326 PANTHER PTHR21716:SF9 1 326 1.7E-145 T 23-04-2016 CLI_RS02555 73bb6160973f905001f7bf3a7f42de61 146 Pfam PF12821 Threonine/Serine exporter, ThrE 4 131 8.2E-39 T 23-04-2016 IPR024528 Threonine/Serine exporter, ThrE CLI_RS02555 73bb6160973f905001f7bf3a7f42de61 146 PANTHER PTHR34390 1 145 7.3E-44 T 23-04-2016 CLI_RS18590 598beb1dda9a33d7d7cd0578aba5b81c 352 SUPERFAMILY SSF51412 10 348 1.83E-52 T 23-04-2016 CLI_RS18590 598beb1dda9a33d7d7cd0578aba5b81c 352 Gene3D G3DSA:3.20.20.70 319 345 8.0E-54 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS18590 598beb1dda9a33d7d7cd0578aba5b81c 352 Gene3D G3DSA:3.20.20.70 10 286 8.0E-54 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS18590 598beb1dda9a33d7d7cd0578aba5b81c 352 PANTHER PTHR32332:SF18 2 352 6.2E-187 T 23-04-2016 CLI_RS18590 598beb1dda9a33d7d7cd0578aba5b81c 352 PANTHER PTHR32332 2 352 6.2E-187 T 23-04-2016 CLI_RS18590 598beb1dda9a33d7d7cd0578aba5b81c 352 Pfam PF03060 Nitronate monooxygenase 7 350 1.9E-61 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CLI_RS00100 876c156855b56256f9661da93745ab6e 117 Gene3D G3DSA:3.10.530.10 45 113 3.1E-29 T 23-04-2016 IPR012460 Protein of unknown function DUF1667 CLI_RS00100 876c156855b56256f9661da93745ab6e 117 PANTHER PTHR39450 2 117 9.8E-57 T 23-04-2016 CLI_RS00100 876c156855b56256f9661da93745ab6e 117 SUPERFAMILY SSF160148 45 116 6.41E-25 T 23-04-2016 IPR012460 Protein of unknown function DUF1667 CLI_RS00100 876c156855b56256f9661da93745ab6e 117 Pfam PF07892 Protein of unknown function (DUF1667) 34 113 1.0E-25 T 23-04-2016 IPR012460 Protein of unknown function DUF1667 CLI_RS14585 d6a0a6e2c15a52b355f99e0f8e3d6917 417 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 104 342 9.5E-27 T 23-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CLI_RS14585 d6a0a6e2c15a52b355f99e0f8e3d6917 417 SUPERFAMILY SSF53383 76 413 8.51E-63 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS14585 d6a0a6e2c15a52b355f99e0f8e3d6917 417 PANTHER PTHR11999:SF5 76 412 1.2E-83 T 23-04-2016 CLI_RS14585 d6a0a6e2c15a52b355f99e0f8e3d6917 417 PANTHER PTHR11999 76 412 1.2E-83 T 23-04-2016 CLI_RS14585 d6a0a6e2c15a52b355f99e0f8e3d6917 417 Gene3D G3DSA:3.40.640.10 81 313 5.9E-46 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLI_RS13835 493e5ea9a19e7c64d293c56981e4ac2b 345 SUPERFAMILY SSF52317 2 171 4.17E-42 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS13835 493e5ea9a19e7c64d293c56981e4ac2b 345 Gene3D G3DSA:3.50.30.60 206 338 1.3E-28 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain CLI_RS13835 493e5ea9a19e7c64d293c56981e4ac2b 345 PIRSF PIRSF028757 4 344 6.2E-65 T 23-04-2016 IPR003507 Peptidase family S66 CLI_RS13835 493e5ea9a19e7c64d293c56981e4ac2b 345 Gene3D G3DSA:3.40.50.10740 3 172 7.1E-42 T 23-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain CLI_RS13835 493e5ea9a19e7c64d293c56981e4ac2b 345 Pfam PF02016 LD-carboxypeptidase 16 330 7.9E-67 T 23-04-2016 IPR003507 Peptidase family S66 CLI_RS13835 493e5ea9a19e7c64d293c56981e4ac2b 345 PANTHER PTHR30237 4 345 1.2E-214 T 23-04-2016 CLI_RS13835 493e5ea9a19e7c64d293c56981e4ac2b 345 SUPERFAMILY SSF141986 193 336 3.53E-26 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain CLI_RS13835 493e5ea9a19e7c64d293c56981e4ac2b 345 PANTHER PTHR30237:SF4 4 345 1.2E-214 T 23-04-2016 CLI_RS02675 76ae0706890633f09472f9920a83fb2e 212 Pfam PF02517 CAAX protease self-immunity 118 206 7.6E-11 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 CLI_RS14595 32af0177521e4b43175b5d16d8f84fe8 244 PANTHER PTHR39082 1 244 6.6E-59 T 23-04-2016 CLI_RS14595 32af0177521e4b43175b5d16d8f84fe8 244 Pfam PF02591 C4-type zinc ribbon domain 200 232 8.5E-12 T 23-04-2016 IPR003743 C4-type zinc ribbon domain CLI_RS09865 f8d2b323b30727d826c06686571f2c0a 214 PANTHER PTHR12677 6 206 1.9E-22 T 23-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 CLI_RS09865 f8d2b323b30727d826c06686571f2c0a 214 Pfam PF09335 SNARE associated Golgi protein 63 179 1.7E-19 T 23-04-2016 IPR032816 SNARE associated Golgi protein CLI_RS13120 e9527e17f08760adff474a54dfbe3b5f 287 SUPERFAMILY SSF53590 1 254 1.44E-40 T 23-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CLI_RS13120 e9527e17f08760adff474a54dfbe3b5f 287 PANTHER PTHR12304:SF4 2 254 3.8E-46 T 23-04-2016 CLI_RS13120 e9527e17f08760adff474a54dfbe3b5f 287 PANTHER PTHR12304 2 254 3.8E-46 T 23-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CLI_RS13120 e9527e17f08760adff474a54dfbe3b5f 287 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 242 1.0E-27 T 23-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CLI_RS13120 e9527e17f08760adff474a54dfbe3b5f 287 Gene3D G3DSA:3.90.245.10 82 284 4.9E-30 T 23-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CLI_RS13120 e9527e17f08760adff474a54dfbe3b5f 287 Gene3D G3DSA:3.90.245.10 1 74 1.9E-12 T 23-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 Gene3D G3DSA:3.40.50.720 370 434 6.9E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 Gene3D G3DSA:3.40.50.720 130 216 6.9E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 Gene3D G3DSA:1.10.1060.10 6 129 5.0E-34 T 23-04-2016 CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 127 419 2.8E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 SUPERFAMILY SSF46548 12 135 1.05E-25 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 8 113 1.0E-32 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 Gene3D G3DSA:3.50.50.60 217 355 4.9E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 PANTHER PTHR11938:SF50 8 430 1.6E-124 T 23-04-2016 CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 SUPERFAMILY SSF51971 125 355 1.35E-56 T 23-04-2016 CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 PRINTS PR00419 Adrenodoxin reductase family signature 294 307 5.6E-23 T 23-04-2016 CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 PRINTS PR00419 Adrenodoxin reductase family signature 260 274 5.6E-23 T 23-04-2016 CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 PRINTS PR00419 Adrenodoxin reductase family signature 192 202 5.6E-23 T 23-04-2016 CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 PRINTS PR00419 Adrenodoxin reductase family signature 127 149 5.6E-23 T 23-04-2016 CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 PRINTS PR00419 Adrenodoxin reductase family signature 150 163 5.6E-23 T 23-04-2016 CLI_RS14020 387800aa53f0f30aa81d18649b8940ac 438 PANTHER PTHR11938 8 430 1.6E-124 T 23-04-2016 CLI_RS14405 c800a7bd3bf795543e4c284653eef474 284 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 12 267 3.1E-125 T 23-04-2016 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family CLI_RS16555 0309dddc4389fb174c105f16ec441c36 188 Pfam PF03243 Alkylmercury lyase 106 187 1.5E-14 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CLI_RS16555 0309dddc4389fb174c105f16ec441c36 188 SUPERFAMILY SSF160387 110 188 2.17E-20 T 23-04-2016 CLI_RS04790 b66dafd0fb68e86ddc9f88331d4856f9 182 PIRSF PIRSF016661 1 182 1.2E-47 T 23-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CLI_RS04790 b66dafd0fb68e86ddc9f88331d4856f9 182 PANTHER PTHR34295 1 182 2.3E-75 T 23-04-2016 CLI_RS04790 b66dafd0fb68e86ddc9f88331d4856f9 182 Pfam PF02632 BioY family 32 173 1.1E-38 T 23-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CLI_RS04790 b66dafd0fb68e86ddc9f88331d4856f9 182 PANTHER PTHR34295:SF2 1 182 2.3E-75 T 23-04-2016 CLI_RS00885 44b4f758e12d432226cde8ea421140b5 122 Pfam PF03899 ATP synthase I chain 11 104 3.2E-11 T 23-04-2016 IPR005598 ATP synthase protein I CLI_RS07720 709807c8c537c686649e696622dfadd0 272 Gene3D G3DSA:3.40.190.10 40 172 2.1E-39 T 23-04-2016 CLI_RS07720 709807c8c537c686649e696622dfadd0 272 PANTHER PTHR30429 2 272 4.9E-114 T 23-04-2016 IPR004872 Lipoprotein NlpA family CLI_RS07720 709807c8c537c686649e696622dfadd0 272 SUPERFAMILY SSF53850 43 272 6.52E-47 T 23-04-2016 CLI_RS07720 709807c8c537c686649e696622dfadd0 272 Pfam PF03180 NLPA lipoprotein 43 271 6.5E-51 T 23-04-2016 IPR004872 Lipoprotein NlpA family CLI_RS13480 409aeca5535ef7ac6607c4fe06e4b905 55 SUPERFAMILY SSF140500 4 52 9.42E-8 T 23-04-2016 CLI_RS13480 409aeca5535ef7ac6607c4fe06e4b905 55 Pfam PF09388 Spo0E like sporulation regulatory protein 7 51 8.9E-10 T 23-04-2016 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 CLI_RS14850 e450db87b30834ef1a45096a5de87759 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 85 8.0E-22 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CLI_RS14850 e450db87b30834ef1a45096a5de87759 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 2.9E-25 T 23-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 CLI_RS14850 e450db87b30834ef1a45096a5de87759 97 SMART SM01103 2 85 2.2E-39 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CLI_RS14850 e450db87b30834ef1a45096a5de87759 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 95 7.0E-29 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CLI_RS14850 e450db87b30834ef1a45096a5de87759 97 Gene3D G3DSA:3.30.110.60 1 95 4.6E-31 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CLI_RS14850 e450db87b30834ef1a45096a5de87759 97 SUPERFAMILY SSF75471 1 95 5.49E-30 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CLI_RS14850 e450db87b30834ef1a45096a5de87759 97 PANTHER PTHR31846 1 94 1.1E-30 T 23-04-2016 CLI_RS12665 3c948a48cc1c2703ab15fc67592d229a 151 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 151 81.374 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CLI_RS12665 3c948a48cc1c2703ab15fc67592d229a 151 Pfam PF03477 ATP cone domain 50 136 5.0E-19 T 23-04-2016 IPR005144 ATP-cone domain CLI_RS12665 3c948a48cc1c2703ab15fc67592d229a 151 PANTHER PTHR30455:SF2 2 151 8.0E-72 T 23-04-2016 CLI_RS12665 3c948a48cc1c2703ab15fc67592d229a 151 PANTHER PTHR30455 2 151 8.0E-72 T 23-04-2016 CLI_RS12665 3c948a48cc1c2703ab15fc67592d229a 151 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.2E-59 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CLI_RS05925 86fdd67e9e72503a346fa5f91fe6fd23 186 Pfam PF00857 Isochorismatase family 5 186 8.5E-19 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CLI_RS05925 86fdd67e9e72503a346fa5f91fe6fd23 186 SUPERFAMILY SSF52499 5 184 3.27E-29 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CLI_RS05925 86fdd67e9e72503a346fa5f91fe6fd23 186 Gene3D G3DSA:3.40.50.850 4 186 1.0E-39 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CLI_RS05925 86fdd67e9e72503a346fa5f91fe6fd23 186 PANTHER PTHR11080:SF2 6 186 1.1E-36 T 23-04-2016 CLI_RS05925 86fdd67e9e72503a346fa5f91fe6fd23 186 PANTHER PTHR11080 6 186 1.1E-36 T 23-04-2016 CLI_RS08410 d83f2979cc426f1b43c160383a269222 439 Gene3D G3DSA:3.40.1160.10 100 281 4.8E-42 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS08410 d83f2979cc426f1b43c160383a269222 439 Gene3D G3DSA:3.40.1160.10 3 50 4.8E-42 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS08410 d83f2979cc426f1b43c160383a269222 439 Pfam PF00696 Amino acid kinase family 3 265 1.2E-31 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS08410 d83f2979cc426f1b43c160383a269222 439 SUPERFAMILY SSF55021 288 381 3.27E-14 T 23-04-2016 CLI_RS08410 d83f2979cc426f1b43c160383a269222 439 SUPERFAMILY SSF53633 5 279 8.25E-57 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CLI_RS08410 d83f2979cc426f1b43c160383a269222 439 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 4 438 4.0E-73 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS08410 d83f2979cc426f1b43c160383a269222 439 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS08410 d83f2979cc426f1b43c160383a269222 439 PANTHER PTHR21499 5 438 3.7E-125 T 23-04-2016 CLI_RS08410 d83f2979cc426f1b43c160383a269222 439 PANTHER PTHR21499:SF3 5 438 3.7E-125 T 23-04-2016 CLI_RS08410 d83f2979cc426f1b43c160383a269222 439 SUPERFAMILY SSF55021 365 438 9.16E-18 T 23-04-2016 CLI_RS08410 d83f2979cc426f1b43c160383a269222 439 PIRSF PIRSF000726 2 439 3.9E-72 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CLI_RS16795 7d5ce134d3dce089271f4aced141a1be 177 Pfam PF00583 Acetyltransferase (GNAT) family 76 152 1.3E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS16795 7d5ce134d3dce089271f4aced141a1be 177 PANTHER PTHR23091 13 177 3.0E-20 T 23-04-2016 CLI_RS16795 7d5ce134d3dce089271f4aced141a1be 177 SUPERFAMILY SSF55729 8 175 3.43E-28 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS16795 7d5ce134d3dce089271f4aced141a1be 177 Gene3D G3DSA:3.40.630.30 11 176 8.3E-33 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS07795 5bf8359eaa7a99d73abe3a205200981e 274 PANTHER PTHR32243:SF7 1 274 3.5E-148 T 23-04-2016 CLI_RS07795 5bf8359eaa7a99d73abe3a205200981e 274 SUPERFAMILY SSF161098 3 274 3.27E-73 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07795 5bf8359eaa7a99d73abe3a205200981e 274 PANTHER PTHR32243 1 274 3.5E-148 T 23-04-2016 CLI_RS07795 5bf8359eaa7a99d73abe3a205200981e 274 Gene3D G3DSA:1.10.3720.10 3 261 2.3E-67 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS07795 5bf8359eaa7a99d73abe3a205200981e 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 268 2.8E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS04050 ae9bf3afbca0b9539580408687fccf13 121 SUPERFAMILY SSF52788 9 110 1.02E-15 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLI_RS04050 ae9bf3afbca0b9539580408687fccf13 121 SMART SM00226 3 111 0.0033 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLI_RS04050 ae9bf3afbca0b9539580408687fccf13 121 Gene3D G3DSA:3.40.50.270 9 109 2.3E-17 T 23-04-2016 CLI_RS14530 3b3c86dbb9bf5b58e74a79b30ee1c200 123 PANTHER PTHR38445 1 118 1.2E-19 T 23-04-2016 CLI_RS14530 3b3c86dbb9bf5b58e74a79b30ee1c200 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 3.5E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS14530 3b3c86dbb9bf5b58e74a79b30ee1c200 123 SMART SM00345 17 76 7.1E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLI_RS14530 3b3c86dbb9bf5b58e74a79b30ee1c200 123 PANTHER PTHR38445:SF2 1 118 1.2E-19 T 23-04-2016 CLI_RS14530 3b3c86dbb9bf5b58e74a79b30ee1c200 123 Gene3D G3DSA:1.10.10.10 5 77 2.1E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14530 3b3c86dbb9bf5b58e74a79b30ee1c200 123 SUPERFAMILY SSF46785 6 80 4.79E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05810 13a503689773f2ae6e4a29169819974e 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 250 4.5E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS05810 13a503689773f2ae6e4a29169819974e 268 SUPERFAMILY SSF161098 5 258 5.79E-48 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS05810 13a503689773f2ae6e4a29169819974e 268 Gene3D G3DSA:1.10.3720.10 4 253 7.3E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS05810 13a503689773f2ae6e4a29169819974e 268 PANTHER PTHR30193:SF20 6 267 2.3E-77 T 23-04-2016 CLI_RS05810 13a503689773f2ae6e4a29169819974e 268 PANTHER PTHR30193 6 267 2.3E-77 T 23-04-2016 CLI_RS09580 e64926de1c54fb38962fd866a3cf9aa0 172 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 3 172 3.1E-51 T 23-04-2016 IPR014198 Stage III sporulation protein AB CLI_RS09580 e64926de1c54fb38962fd866a3cf9aa0 172 PIRSF PIRSF021435 1 172 4.3E-57 T 23-04-2016 IPR014198 Stage III sporulation protein AB CLI_RS09580 e64926de1c54fb38962fd866a3cf9aa0 172 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 3 172 1.1E-48 T 23-04-2016 IPR014198 Stage III sporulation protein AB CLI_RS10325 438498aa2ce56bf4e911b375ad171be2 153 Pfam PF07505 Protein of unknown function (DUF5131) 2 127 3.1E-28 T 23-04-2016 IPR011101 Protein of unknown function DUF5131 CLI_RS05035 58447ed380af7211123cb4cec4cf3e53 260 PIRSF PIRSF033579 1 260 1.8E-99 T 23-04-2016 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CLI_RS05035 58447ed380af7211123cb4cec4cf3e53 260 Pfam PF06180 Cobalt chelatase (CbiK) 6 259 1.5E-94 T 23-04-2016 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CLI_RS05035 58447ed380af7211123cb4cec4cf3e53 260 Gene3D G3DSA:3.40.50.1400 178 243 1.2E-21 T 23-04-2016 CLI_RS05035 58447ed380af7211123cb4cec4cf3e53 260 Gene3D G3DSA:3.40.50.1400 2 156 3.6E-42 T 23-04-2016 CLI_RS05035 58447ed380af7211123cb4cec4cf3e53 260 SUPERFAMILY SSF53800 5 258 1.23E-81 T 23-04-2016 CLI_RS13730 d6c5cb2e39e7b4c90ea58fb3a375499e 54 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 3 30 4.4E-5 T 23-04-2016 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLI_RS03585 59bb1ded22f2249a9112f25848b17874 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 177 4.5E-14 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS03585 59bb1ded22f2249a9112f25848b17874 187 Pfam PF04542 Sigma-70 region 2 24 92 2.0E-7 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS03585 59bb1ded22f2249a9112f25848b17874 187 Gene3D G3DSA:1.10.1740.10 3 104 1.2E-11 T 23-04-2016 CLI_RS03585 59bb1ded22f2249a9112f25848b17874 187 SUPERFAMILY SSF88659 109 177 2.06E-5 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS03585 59bb1ded22f2249a9112f25848b17874 187 PANTHER PTHR30173 1 177 6.4E-25 T 23-04-2016 CLI_RS03585 59bb1ded22f2249a9112f25848b17874 187 SUPERFAMILY SSF88946 4 104 7.85E-12 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS04355 dddf4c20ebe82d7b38fde7952a24f2dd 82 Pfam PF07875 Coat F domain 2 63 1.4E-21 T 23-04-2016 IPR012851 Spore coat protein CotF-like CLI_RS04345 3ceb12bafc801429acc8006bd563cc61 90 Pfam PF14898 Domain of unknown function (DUF4491) 2 90 1.4E-33 T 23-04-2016 IPR027890 Protein of unknown function DUF4491 CLI_RS17560 9c65652885495a2de182eb9a5cbe26e0 220 Gene3D G3DSA:3.40.50.300 3 198 6.8E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17560 9c65652885495a2de182eb9a5cbe26e0 220 SUPERFAMILY SSF52540 3 153 5.21E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14440 56b517e4f4c054a8cc8914ed70e2617e 190 SUPERFAMILY SSF52266 1 189 2.17E-39 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CLI_RS14440 56b517e4f4c054a8cc8914ed70e2617e 190 PANTHER PTHR30383 1 190 4.9E-35 T 23-04-2016 CLI_RS14440 56b517e4f4c054a8cc8914ed70e2617e 190 Gene3D G3DSA:3.40.50.1110 2 188 1.4E-43 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CLI_RS14440 56b517e4f4c054a8cc8914ed70e2617e 190 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 180 5.6E-21 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CLI_RS10020 0574c063402d0e9e138f3dd65835e4fd 142 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 14 140 7.3E-29 T 23-04-2016 IPR010181 CGCAxxGCC motif CLI_RS10020 0574c063402d0e9e138f3dd65835e4fd 142 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 15 142 1.4E-20 T 23-04-2016 IPR010181 CGCAxxGCC motif CLI_RS13180 e6a6a1ac782c6ba807f1285772f3a81a 202 Gene3D G3DSA:3.40.50.150 47 135 4.4E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS13180 e6a6a1ac782c6ba807f1285772f3a81a 202 SUPERFAMILY SSF53335 45 122 2.95E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS00595 7acfbc0599d8af5447618a4163a73b95 242 PANTHER PTHR33778 5 237 8.1E-65 T 23-04-2016 CLI_RS00595 7acfbc0599d8af5447618a4163a73b95 242 Pfam PF02308 MgtC family 11 147 7.0E-39 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLI_RS00595 7acfbc0599d8af5447618a4163a73b95 242 PRINTS PR01837 MgtC/SapB protein signature 74 96 3.1E-41 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLI_RS00595 7acfbc0599d8af5447618a4163a73b95 242 PRINTS PR01837 MgtC/SapB protein signature 13 32 3.1E-41 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLI_RS00595 7acfbc0599d8af5447618a4163a73b95 242 PRINTS PR01837 MgtC/SapB protein signature 32 50 3.1E-41 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLI_RS00595 7acfbc0599d8af5447618a4163a73b95 242 PRINTS PR01837 MgtC/SapB protein signature 101 125 3.1E-41 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLI_RS11790 a71b1d1796c060fd23db9ee1df3a02c9 201 Pfam PF06810 Phage minor structural protein GP20 23 149 3.5E-35 T 23-04-2016 IPR009636 Capsid assembly scaffolding protein GO:0005198 CLI_RS04390 8ffa2f3fd6dff64e180495b8b7cf12a5 146 SUPERFAMILY SSF49764 15 145 3.31E-37 T 23-04-2016 IPR008978 HSP20-like chaperone CLI_RS04390 8ffa2f3fd6dff64e180495b8b7cf12a5 146 Pfam PF00011 Hsp20/alpha crystallin family 45 146 4.0E-26 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain CLI_RS04390 8ffa2f3fd6dff64e180495b8b7cf12a5 146 PANTHER PTHR11527 1 145 2.3E-60 T 23-04-2016 IPR031107 Small heat shock protein HSP20 CLI_RS04390 8ffa2f3fd6dff64e180495b8b7cf12a5 146 Gene3D G3DSA:2.60.40.790 13 145 2.7E-40 T 23-04-2016 IPR008978 HSP20-like chaperone CLI_RS04390 8ffa2f3fd6dff64e180495b8b7cf12a5 146 PANTHER PTHR11527:SF119 1 145 2.3E-60 T 23-04-2016 CLI_RS18790 c7bceadfbe9ce5e4d88402c6aaa2953b 81 Pfam PF03698 Uncharacterised protein family (UPF0180) 2 73 3.2E-12 T 23-04-2016 IPR005370 Uncharacterised protein family UPF0180 CLI_RS12765 36415eadf8070f167dfc8f5b6843927a 67 SUPERFAMILY SSF47413 8 60 3.94E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS12765 36415eadf8070f167dfc8f5b6843927a 67 SMART SM00530 6 61 9.0E-10 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS12765 36415eadf8070f167dfc8f5b6843927a 67 Pfam PF01381 Helix-turn-helix 8 58 9.5E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS12765 36415eadf8070f167dfc8f5b6843927a 67 Gene3D G3DSA:1.10.260.40 6 59 4.9E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS05935 96791090ceda5bee8951fe600c6a3226 154 Gene3D G3DSA:1.20.1260.10 3 153 1.9E-9 T 23-04-2016 IPR012347 Ferritin-related CLI_RS08115 06b22339dbf1f28473021a6634ef0d9e 416 PANTHER PTHR30330:SF3 1 416 2.1E-79 T 23-04-2016 CLI_RS08115 06b22339dbf1f28473021a6634ef0d9e 416 Pfam PF01235 Sodium:alanine symporter family 37 406 2.9E-25 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS08115 06b22339dbf1f28473021a6634ef0d9e 416 PANTHER PTHR30330 1 416 2.1E-79 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS08115 06b22339dbf1f28473021a6634ef0d9e 416 PRINTS PR00175 Sodium/alanine symporter signature 188 207 4.8E-6 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS08115 06b22339dbf1f28473021a6634ef0d9e 416 PRINTS PR00175 Sodium/alanine symporter signature 385 405 4.8E-6 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS08115 06b22339dbf1f28473021a6634ef0d9e 416 PRINTS PR00175 Sodium/alanine symporter signature 328 350 4.8E-6 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS08115 06b22339dbf1f28473021a6634ef0d9e 416 PRINTS PR00175 Sodium/alanine symporter signature 68 90 4.8E-6 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLI_RS11130 c8281d72f138e09c0b7c3297949e6547 119 PANTHER PTHR33937 1 118 1.7E-43 T 23-04-2016 CLI_RS11130 c8281d72f138e09c0b7c3297949e6547 119 Gene3D G3DSA:3.30.420.130 1 111 5.9E-32 T 23-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLI_RS11130 c8281d72f138e09c0b7c3297949e6547 119 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 13 102 2.3E-21 T 23-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLI_RS11130 c8281d72f138e09c0b7c3297949e6547 119 PANTHER PTHR33937:SF2 1 118 1.7E-43 T 23-04-2016 CLI_RS11130 c8281d72f138e09c0b7c3297949e6547 119 SUPERFAMILY SSF53146 1 111 2.35E-28 T 23-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLI_RS14890 4ade4b70d792cc9542d8b4488be7fb13 283 PANTHER PTHR39188 1 283 3.2E-60 T 23-04-2016 CLI_RS14890 4ade4b70d792cc9542d8b4488be7fb13 283 SUPERFAMILY SSF54631 218 274 7.34E-5 T 23-04-2016 CLI_RS17185 40e55ee61933e3b2295faa2a20dc409c 98 PANTHER PTHR34382 1 98 1.8E-44 T 23-04-2016 CLI_RS17185 40e55ee61933e3b2295faa2a20dc409c 98 PANTHER PTHR34382:SF2 1 98 1.8E-44 T 23-04-2016 CLI_RS17185 40e55ee61933e3b2295faa2a20dc409c 98 Gene3D G3DSA:1.20.58.80 1 97 2.7E-37 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS17185 40e55ee61933e3b2295faa2a20dc409c 98 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 4 95 7.2E-36 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS17185 40e55ee61933e3b2295faa2a20dc409c 98 SUPERFAMILY SSF46973 1 95 8.37E-36 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS17185 40e55ee61933e3b2295faa2a20dc409c 98 PIRSF PIRSF000699 1 98 1.2E-37 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CLI_RS15985 f18031a90a943577acb232e99fe766b5 565 Pfam PF03354 Phage Terminase 83 546 1.7E-92 T 23-04-2016 IPR005021 Phage terminase CLI_RS15985 f18031a90a943577acb232e99fe766b5 565 PANTHER PTHR41287 1 565 1.2E-109 T 23-04-2016 CLI_RS09075 24267e977532d8c2e7c8af747f41786c 395 Pfam PF00999 Sodium/hydrogen exchanger family 7 378 1.6E-40 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CLI_RS09075 24267e977532d8c2e7c8af747f41786c 395 PANTHER PTHR31102 4 391 5.4E-118 T 23-04-2016 CLI_RS10370 b20979dc5fa43defd89a31de54c523bd 97 Pfam PF14242 Domain of unknown function (DUF4342) 7 75 3.9E-18 T 23-04-2016 IPR025642 Domain of unknown function DUF4342 CLI_RS11605 86149e2be618a79cf2f321bc95c233b9 180 Pfam PF14242 Domain of unknown function (DUF4342) 85 139 4.6E-6 T 23-04-2016 IPR025642 Domain of unknown function DUF4342 CLI_RS11605 86149e2be618a79cf2f321bc95c233b9 180 Gene3D G3DSA:1.10.8.10 7 40 1.9E-7 T 23-04-2016 CLI_RS11605 86149e2be618a79cf2f321bc95c233b9 180 SUPERFAMILY SSF46934 5 46 7.06E-5 T 23-04-2016 IPR009060 UBA-like GO:0005515 CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 SMART SM00388 194 261 6.3E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 304 414 2.4E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 Gene3D G3DSA:3.30.565.10 248 415 4.9E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 3.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 370 3.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 414 3.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 395 3.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 SUPERFAMILY SSF47384 178 257 1.96E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 Pfam PF00512 His Kinase A (phospho-acceptor) domain 195 258 1.6E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 PANTHER PTHR24423 173 415 9.1E-66 T 23-04-2016 CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 Gene3D G3DSA:1.10.287.130 186 247 1.1E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 SMART SM00304 122 193 0.0067 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 SUPERFAMILY SSF55874 250 415 2.36E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS11590 12734af80c7f2e45bbc50d73f4bb44f9 416 SMART SM00387 304 416 2.2E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09330 917f7911bed5a59ee27573ce4f21e35e 597 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 460 594 6.6E-27 T 23-04-2016 IPR018760 Protein of unknown function DUF2326 CLI_RS04055 6d88d3a8669d246232c759dca3394cb7 490 Pfam PF06597 Clostridium P-47 protein 5 483 1.1E-65 T 23-04-2016 IPR010567 Clostridium P47 protein CLI_RS04530 222d47bfc5f82c9b997d99177d21e452 480 Gene3D G3DSA:3.40.50.1820 104 478 1.9E-135 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS04530 222d47bfc5f82c9b997d99177d21e452 480 PANTHER PTHR34043:SF1 5 472 1.2E-131 T 23-04-2016 CLI_RS04530 222d47bfc5f82c9b997d99177d21e452 480 PANTHER PTHR34043 5 472 1.2E-131 T 23-04-2016 CLI_RS04530 222d47bfc5f82c9b997d99177d21e452 480 SUPERFAMILY SSF53474 102 469 4.15E-48 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS17640 87a7937331d4b9cb41704f9b725ad568 184 Gene3D G3DSA:3.20.130.10 1 174 4.9E-76 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLI_RS17640 87a7937331d4b9cb41704f9b725ad568 184 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 13 174 5.8E-55 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLI_RS17640 87a7937331d4b9cb41704f9b725ad568 184 PANTHER PTHR30389 1 184 1.4E-108 T 23-04-2016 CLI_RS17640 87a7937331d4b9cb41704f9b725ad568 184 Pfam PF05683 Fumarase C-terminus 2 175 1.2E-63 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLI_RS17640 87a7937331d4b9cb41704f9b725ad568 184 SUPERFAMILY SSF117457 3 174 5.89E-66 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLI_RS07820 b1c0785dd8ae934838fd56c8bcd01bc1 315 PANTHER PTHR37955:SF1 1 315 2.1E-103 T 23-04-2016 CLI_RS07820 b1c0785dd8ae934838fd56c8bcd01bc1 315 PANTHER PTHR37955 1 315 2.1E-103 T 23-04-2016 CLI_RS07820 b1c0785dd8ae934838fd56c8bcd01bc1 315 Pfam PF03595 Voltage-dependent anion channel 13 297 2.8E-30 T 23-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CLI_RS16775 10e9afd0b8541056fdf4b3f84608dd5c 144 PANTHER PTHR35146:SF1 1 144 1.6E-38 T 23-04-2016 CLI_RS16775 10e9afd0b8541056fdf4b3f84608dd5c 144 PANTHER PTHR35146 1 144 1.6E-38 T 23-04-2016 CLI_RS16775 10e9afd0b8541056fdf4b3f84608dd5c 144 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 15 142 8.1E-38 T 23-04-2016 IPR003791 Protein of unknown function UPF0178 CLI_RS14410 a4617703de1afd68da84ac2f7d61e172 269 Pfam PF13478 XdhC Rossmann domain 107 249 2.0E-38 T 23-04-2016 IPR027051 XdhC Rossmann domain CLI_RS14410 a4617703de1afd68da84ac2f7d61e172 269 PANTHER PTHR30388:SF4 2 268 5.5E-96 T 23-04-2016 CLI_RS14410 a4617703de1afd68da84ac2f7d61e172 269 PANTHER PTHR30388 2 268 5.5E-96 T 23-04-2016 CLI_RS14410 a4617703de1afd68da84ac2f7d61e172 269 Pfam PF02625 XdhC and CoxI family 14 78 2.7E-18 T 23-04-2016 IPR003777 XdhC- CoxI CLI_RS03355 8aafc47f15a169b748060a405cc4025a 196 SUPERFAMILY SSF109604 7 116 2.69E-9 T 23-04-2016 CLI_RS03355 8aafc47f15a169b748060a405cc4025a 196 Gene3D G3DSA:1.10.3210.10 2 166 5.4E-26 T 23-04-2016 IPR006674 HD domain CLI_RS03355 8aafc47f15a169b748060a405cc4025a 196 PANTHER PTHR38659 2 193 3.1E-113 T 23-04-2016 CLI_RS03355 8aafc47f15a169b748060a405cc4025a 196 PANTHER PTHR38659:SF2 2 193 3.1E-113 T 23-04-2016 CLI_RS17870 a6aec32eee88562e335a275e7c5baebb 79 SUPERFAMILY SSF55315 6 78 1.94E-17 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CLI_RS17870 a6aec32eee88562e335a275e7c5baebb 79 Gene3D G3DSA:3.30.1330.30 10 76 1.1E-11 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CLI_RS17870 a6aec32eee88562e335a275e7c5baebb 79 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 10 75 8.1E-13 T 23-04-2016 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 CLI_RS03390 34477a7173325222bd16f4d0866ec7f0 116 Pfam PF14198 Transposon-encoded protein TnpV 7 114 5.4E-24 T 23-04-2016 IPR026989 Transposon-encoded protein TnpV CLI_RS05995 e9e73b1db80e3d1bc0f329aaf195e271 348 Gene3D G3DSA:3.40.190.10 141 277 8.7E-41 T 23-04-2016 CLI_RS05995 e9e73b1db80e3d1bc0f329aaf195e271 348 PANTHER PTHR30006:SF2 49 348 5.1E-98 T 23-04-2016 CLI_RS05995 e9e73b1db80e3d1bc0f329aaf195e271 348 SUPERFAMILY SSF53850 52 342 1.35E-64 T 23-04-2016 CLI_RS05995 e9e73b1db80e3d1bc0f329aaf195e271 348 PANTHER PTHR30006 49 348 5.1E-98 T 23-04-2016 CLI_RS05995 e9e73b1db80e3d1bc0f329aaf195e271 348 Pfam PF13343 Bacterial extracellular solute-binding protein 89 299 6.0E-39 T 23-04-2016 CLI_RS05995 e9e73b1db80e3d1bc0f329aaf195e271 348 Gene3D G3DSA:3.40.190.10 6 136 1.1E-30 T 23-04-2016 CLI_RS05995 e9e73b1db80e3d1bc0f329aaf195e271 348 Gene3D G3DSA:3.40.190.10 278 335 1.1E-30 T 23-04-2016 CLI_RS05995 e9e73b1db80e3d1bc0f329aaf195e271 348 PIRSF PIRSF002825 1 346 1.6E-101 T 23-04-2016 IPR026045 Ferric binding protein CLI_RS05995 e9e73b1db80e3d1bc0f329aaf195e271 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 62 83 7.7E-7 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS05995 e9e73b1db80e3d1bc0f329aaf195e271 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 255 274 7.7E-7 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS05995 e9e73b1db80e3d1bc0f329aaf195e271 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 159 173 7.7E-7 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CLI_RS10710 6ef1b8bb56261af3937bd00fcb7393f7 660 PANTHER PTHR30489 1 660 3.2E-123 T 23-04-2016 CLI_RS10710 6ef1b8bb56261af3937bd00fcb7393f7 660 PIRSF PIRSF018968 1 660 2.7E-68 T 23-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 CLI_RS10710 6ef1b8bb56261af3937bd00fcb7393f7 660 PANTHER PTHR30489:SF14 1 660 3.2E-123 T 23-04-2016 CLI_RS10710 6ef1b8bb56261af3937bd00fcb7393f7 660 Pfam PF02687 FtsX-like permease family 59 178 2.7E-13 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS10710 6ef1b8bb56261af3937bd00fcb7393f7 660 Pfam PF02687 FtsX-like permease family 542 657 7.5E-7 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS02145 8a75557f65f7b042e7a8ac53857aaac9 276 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 13 274 6.4E-65 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CLI_RS02145 8a75557f65f7b042e7a8ac53857aaac9 276 Gene3D G3DSA:1.10.3720.10 7 275 8.0E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS02145 8a75557f65f7b042e7a8ac53857aaac9 276 PANTHER PTHR30425:SF0 1 275 3.2E-89 T 23-04-2016 CLI_RS02145 8a75557f65f7b042e7a8ac53857aaac9 276 PANTHER PTHR30425 1 275 3.2E-89 T 23-04-2016 CLI_RS02145 8a75557f65f7b042e7a8ac53857aaac9 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 272 1.8E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS02145 8a75557f65f7b042e7a8ac53857aaac9 276 SUPERFAMILY SSF161098 14 266 4.21E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS17155 b38aa0825d518461a5eae55ca454a0f1 402 PANTHER PTHR37305 16 402 2.4E-169 T 23-04-2016 CLI_RS17155 b38aa0825d518461a5eae55ca454a0f1 402 Pfam PF12679 ABC-2 family transporter protein 2 400 1.5E-30 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 CLI_RS17155 b38aa0825d518461a5eae55ca454a0f1 402 PANTHER PTHR37305:SF1 16 402 2.4E-169 T 23-04-2016 CLI_RS05645 b0a73fb558e2210ed95d842d5315b2ac 126 SUPERFAMILY SSF54631 4 121 6.19E-32 T 23-04-2016 CLI_RS05645 b0a73fb558e2210ed95d842d5315b2ac 126 Gene3D G3DSA:3.10.580.10 4 122 2.0E-32 T 23-04-2016 CLI_RS05645 b0a73fb558e2210ed95d842d5315b2ac 126 PANTHER PTHR11911 4 122 4.4E-28 T 23-04-2016 CLI_RS05645 b0a73fb558e2210ed95d842d5315b2ac 126 SMART SM00116 74 122 8.7E-8 T 23-04-2016 IPR000644 CBS domain CLI_RS05645 b0a73fb558e2210ed95d842d5315b2ac 126 SMART SM00116 9 57 1.0E-6 T 23-04-2016 IPR000644 CBS domain CLI_RS05645 b0a73fb558e2210ed95d842d5315b2ac 126 Pfam PF00571 CBS domain 70 121 1.1E-10 T 23-04-2016 IPR000644 CBS domain CLI_RS05645 b0a73fb558e2210ed95d842d5315b2ac 126 Pfam PF00571 CBS domain 4 57 8.7E-13 T 23-04-2016 IPR000644 CBS domain CLI_RS11685 a1f647c0a5a59823f426bbb8eea12c3d 84 Pfam PF10779 Haemolysin XhlA 13 78 3.5E-20 T 23-04-2016 IPR019715 Haemolysin XhlA CLI_RS09280 3e4d0d4d87568e90d825c037937713e9 119 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 8 115 5.0E-15 T 23-04-2016 IPR010064 Bacteriophage HK97-gp10, putative tail-component CLI_RS06655 a9d7cd7cea3b4b1dc47c127c12a3c319 98 SMART SM00679 21 52 0.0039 T 23-04-2016 IPR006603 PQ-loop repeat CLI_RS06655 a9d7cd7cea3b4b1dc47c127c12a3c319 98 Pfam PF04193 PQ loop repeat 8 65 7.5E-8 T 23-04-2016 IPR006603 PQ-loop repeat CLI_RS11430 7f49f54f9a4e5ed61587da48d37abb05 248 Pfam PF12730 ABC-2 family transporter protein 5 177 1.0E-9 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 CLI_RS05235 297cd6d5c847b1eb427923c15d9f4e88 272 SUPERFAMILY SSF47781 181 255 7.11E-11 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CLI_RS05235 297cd6d5c847b1eb427923c15d9f4e88 272 PANTHER PTHR21180:SF32 1 270 1.2E-35 T 23-04-2016 CLI_RS05235 297cd6d5c847b1eb427923c15d9f4e88 272 Pfam PF12836 Helix-hairpin-helix motif 190 252 2.1E-10 T 23-04-2016 CLI_RS05235 297cd6d5c847b1eb427923c15d9f4e88 272 Gene3D G3DSA:1.10.150.280 161 254 2.0E-8 T 23-04-2016 CLI_RS05235 297cd6d5c847b1eb427923c15d9f4e88 272 PANTHER PTHR21180 1 270 1.2E-35 T 23-04-2016 CLI_RS13425 fbd00c5eacc65c7cdf1e02ac812b0b90 389 Pfam PF04932 O-Antigen ligase 170 325 1.3E-6 T 23-04-2016 IPR007016 O-antigen ligase-related CLI_RS04515 f7669285ddfb25cdaba586d59aa909a3 233 SUPERFAMILY SSF51182 4 229 3.28E-66 T 23-04-2016 IPR011051 RmlC-like cupin domain CLI_RS04515 f7669285ddfb25cdaba586d59aa909a3 233 Pfam PF02678 Pirin 15 118 2.6E-31 T 23-04-2016 IPR003829 Pirin, N-terminal domain CLI_RS04515 f7669285ddfb25cdaba586d59aa909a3 233 PANTHER PTHR13903 7 233 7.9E-111 T 23-04-2016 IPR012093 Pirin CLI_RS04515 f7669285ddfb25cdaba586d59aa909a3 233 Gene3D G3DSA:2.60.120.10 5 230 5.4E-63 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS04515 f7669285ddfb25cdaba586d59aa909a3 233 PANTHER PTHR13903:SF7 7 233 7.9E-111 T 23-04-2016 CLI_RS04515 f7669285ddfb25cdaba586d59aa909a3 233 PIRSF PIRSF006232 1 231 6.8E-54 T 23-04-2016 IPR012093 Pirin CLI_RS12955 7cf8bf9cc2b556d8579a80d3204779b5 82 SUPERFAMILY SSF47336 3 78 1.55E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS12955 7cf8bf9cc2b556d8579a80d3204779b5 82 Gene3D G3DSA:1.10.1200.10 1 77 7.0E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CLI_RS11475 a8834bce21551c22217596cff83102f4 273 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 24 240 5.0E-59 T 23-04-2016 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 CLI_RS11475 a8834bce21551c22217596cff83102f4 273 Hamap MF_00727 Protein-glutamine gamma-glutamyltransferase [tgl]. 2 249 39.402 T 23-04-2016 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 CLI_RS06520 cdc04525673a7fbf0b92b8fc45b8e91c 347 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 1 347 2.4E-176 T 23-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 CLI_RS06520 cdc04525673a7fbf0b92b8fc45b8e91c 347 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 3 347 7.6E-174 T 23-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 CLI_RS18445 5add5fc23c895924fa108c1f3784e637 581 TIGRFAM TIGR04480 D_pro_red_PrdA: D-proline reductase (dithiol), PrdA proprotein 4 575 1.0E-284 T 23-04-2016 IPR031002 D-proline reductase, PrdA proprotein GO:0050002|GO:0055114 KEGG: 00330+1.21.4.1 CLI_RS18445 5add5fc23c895924fa108c1f3784e637 581 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 159 500 3.4E-29 T 23-04-2016 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 CLI_RS05505 5e6c7398ff8b74bea6e9b91efe8b6677 316 SUPERFAMILY SSF81345 5 312 1.7E-52 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS05505 5e6c7398ff8b74bea6e9b91efe8b6677 316 Pfam PF01032 FecCD transport family 17 312 4.4E-48 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS05505 5e6c7398ff8b74bea6e9b91efe8b6677 316 Gene3D G3DSA:1.10.3470.10 24 314 1.4E-51 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CLI_RS05505 5e6c7398ff8b74bea6e9b91efe8b6677 316 PANTHER PTHR30472:SF19 15 316 6.0E-150 T 23-04-2016 CLI_RS05505 5e6c7398ff8b74bea6e9b91efe8b6677 316 PANTHER PTHR30472 15 316 6.0E-150 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CLI_RS02785 277cb4358eadec197dd9fb6dc1787098 63 Gene3D G3DSA:1.20.1260.10 4 61 1.9E-4 T 23-04-2016 IPR012347 Ferritin-related CLI_RS02785 277cb4358eadec197dd9fb6dc1787098 63 SUPERFAMILY SSF47240 3 61 1.55E-5 T 23-04-2016 IPR009078 Ferritin-like superfamily CLI_RS04270 9a96f462effa4bd26d1cbe2d95f61b89 201 PANTHER PTHR10245:SF47 3 113 1.8E-22 T 23-04-2016 CLI_RS04270 9a96f462effa4bd26d1cbe2d95f61b89 201 Gene3D G3DSA:1.10.260.40 3 65 5.5E-25 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS04270 9a96f462effa4bd26d1cbe2d95f61b89 201 Pfam PF01381 Helix-turn-helix 7 61 3.6E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS04270 9a96f462effa4bd26d1cbe2d95f61b89 201 SMART SM00530 6 61 5.9E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS04270 9a96f462effa4bd26d1cbe2d95f61b89 201 SUPERFAMILY SSF47413 2 65 1.05E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS04270 9a96f462effa4bd26d1cbe2d95f61b89 201 PANTHER PTHR10245 3 113 1.8E-22 T 23-04-2016 CLI_RS18755 e3ee50a76c8f9a08ef9ec9c93b1f75b2 382 PANTHER PTHR30548:SF6 1 382 9.2E-268 T 23-04-2016 CLI_RS18755 e3ee50a76c8f9a08ef9ec9c93b1f75b2 382 PANTHER PTHR30548 1 382 9.2E-268 T 23-04-2016 CLI_RS18755 e3ee50a76c8f9a08ef9ec9c93b1f75b2 382 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 37 382 1.3E-83 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS03190 6bae1a13ed26e619e7887ab82510035b 170 PANTHER PTHR40060 1 170 1.0E-72 T 23-04-2016 CLI_RS03190 6bae1a13ed26e619e7887ab82510035b 170 Hamap MF_01515 UPF0316 protein . 2 170 27.456 T 23-04-2016 IPR022930 Protein of unknown function UPF0316 CLI_RS03190 6bae1a13ed26e619e7887ab82510035b 170 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 113 164 1.3E-7 T 23-04-2016 IPR019264 Domain of unknown function DUF2179 CLI_RS08205 a08c21b71715817fd6247c6601b2f2a1 151 Pfam PF09537 Domain of unknown function (DUF2383) 11 100 9.3E-7 T 23-04-2016 IPR019052 Domain of unknown function DUF2383 CLI_RS08205 a08c21b71715817fd6247c6601b2f2a1 151 Gene3D G3DSA:1.20.1260.10 24 150 1.5E-5 T 23-04-2016 IPR012347 Ferritin-related CLI_RS10915 f2ef85d914c4063ef53d1a059696540e 121 Gene3D G3DSA:3.10.180.10 2 120 1.0E-20 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS10915 f2ef85d914c4063ef53d1a059696540e 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 117 3.7E-12 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLI_RS10915 f2ef85d914c4063ef53d1a059696540e 121 SUPERFAMILY SSF54593 1 120 1.05E-20 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS16395 7cc6137e0952026400564b38e216a573 311 SUPERFAMILY SSF69318 50 168 9.42E-6 T 23-04-2016 CLI_RS03010 27486c2b5eb10892a5f7f3e1e897ee22 378 SUPERFAMILY SSF103642 356 376 6.7E-7 T 23-04-2016 CLI_RS03010 27486c2b5eb10892a5f7f3e1e897ee22 378 PANTHER PTHR33747:SF1 222 377 2.3E-23 T 23-04-2016 CLI_RS03010 27486c2b5eb10892a5f7f3e1e897ee22 378 Gene3D G3DSA:3.10.450.50 340 376 1.5E-8 T 23-04-2016 IPR032710 NTF2-like domain CLI_RS03010 27486c2b5eb10892a5f7f3e1e897ee22 378 Pfam PF02810 SEC-C motif 359 376 5.4E-9 T 23-04-2016 IPR004027 SEC-C motif CLI_RS03010 27486c2b5eb10892a5f7f3e1e897ee22 378 PANTHER PTHR33747 222 377 2.3E-23 T 23-04-2016 CLI_RS09125 fcaaacd6e2dd5f8b0a9f9a1ba7f8ffbc 240 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 1 235 4.0E-45 T 23-04-2016 CLI_RS09125 fcaaacd6e2dd5f8b0a9f9a1ba7f8ffbc 240 PANTHER PTHR41260:SF1 1 238 7.3E-159 T 23-04-2016 CLI_RS09125 fcaaacd6e2dd5f8b0a9f9a1ba7f8ffbc 240 Pfam PF12787 EcsC protein family 9 236 5.1E-68 T 23-04-2016 IPR024787 EcsC protein CLI_RS09125 fcaaacd6e2dd5f8b0a9f9a1ba7f8ffbc 240 PANTHER PTHR41260 1 238 7.3E-159 T 23-04-2016 CLI_RS01060 9807d724593c5949ec3f31ec86fbe23f 228 SUPERFAMILY SSF56300 3 218 2.17E-27 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS01060 9807d724593c5949ec3f31ec86fbe23f 228 Gene3D G3DSA:3.60.21.10 3 121 4.2E-51 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS01060 9807d724593c5949ec3f31ec86fbe23f 228 Gene3D G3DSA:3.60.21.10 159 227 4.2E-51 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CLI_RS01060 9807d724593c5949ec3f31ec86fbe23f 228 Pfam PF00149 Calcineurin-like phosphoesterase 4 195 1.2E-12 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CLI_RS01060 9807d724593c5949ec3f31ec86fbe23f 228 PIRSF PIRSF033094 1 228 3.0E-99 T 23-04-2016 IPR014578 Predicted phosphoesterase, CT488 type CLI_RS18760 2830e4d1dca0e24100c5c11d3eaee9d3 65 PANTHER PTHR38455 2 65 2.5E-32 T 23-04-2016 CLI_RS18760 2830e4d1dca0e24100c5c11d3eaee9d3 65 PIRSF PIRSF037263 1 65 1.6E-34 T 23-04-2016 IPR009296 Protein of unknown function DUF951 CLI_RS18760 2830e4d1dca0e24100c5c11d3eaee9d3 65 PANTHER PTHR38455:SF1 2 65 2.5E-32 T 23-04-2016 CLI_RS18760 2830e4d1dca0e24100c5c11d3eaee9d3 65 Pfam PF06107 Bacterial protein of unknown function (DUF951) 5 58 2.8E-31 T 23-04-2016 IPR009296 Protein of unknown function DUF951 CLI_RS04420 a824b7cd23c9a68295406a9b44e0842f 387 Gene3D G3DSA:2.60.40.1630 195 272 2.5E-6 T 23-04-2016 CLI_RS04420 a824b7cd23c9a68295406a9b44e0842f 387 Gene3D G3DSA:2.60.40.1630 96 159 2.5E-6 T 23-04-2016 CLI_RS04420 a824b7cd23c9a68295406a9b44e0842f 387 Pfam PF13786 Domain of unknown function (DUF4179) 35 136 1.8E-15 T 23-04-2016 IPR025436 Domain of unknown function DUF4179 CLI_RS04955 f18759c96fee3defbd2dee7696c92e5d 126 Pfam PF13630 SdpI/YhfL protein family 32 108 2.1E-20 T 23-04-2016 IPR025962 SdpI/YhfL protein family CLI_RS03255 6e6c3622eecdd13b2d566f65f3749820 379 SUPERFAMILY SSF48452 47 116 4.47E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS03255 6e6c3622eecdd13b2d566f65f3749820 379 Gene3D G3DSA:1.25.40.10 174 196 1.7E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS03255 6e6c3622eecdd13b2d566f65f3749820 379 Gene3D G3DSA:1.25.40.10 44 139 1.7E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLI_RS03255 6e6c3622eecdd13b2d566f65f3749820 379 Pfam PF07532 Bacterial Ig-like domain (group 4) 131 184 9.7E-10 T 23-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 CLI_RS06525 7c1ff4400971910c438b8fea151ec6e2 62 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 1 62 2.0E-29 T 23-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 CLI_RS09170 c09109c7084ee4ea3116fa49408d8e3b 508 PANTHER PTHR11785:SF322 1 499 3.8E-125 T 23-04-2016 CLI_RS09170 c09109c7084ee4ea3116fa49408d8e3b 508 Pfam PF13520 Amino acid permease 13 481 2.5E-29 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS09170 c09109c7084ee4ea3116fa49408d8e3b 508 PANTHER PTHR11785 1 499 3.8E-125 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS09170 c09109c7084ee4ea3116fa49408d8e3b 508 PIRSF PIRSF006060 1 507 2.6E-45 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS17475 b460376b6e736bb2f01234ef28b61067 390 PRINTS PR00173 Glutamate-aspartate symporter signature 269 295 7.7E-9 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS17475 b460376b6e736bb2f01234ef28b61067 390 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 7.7E-9 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS17475 b460376b6e736bb2f01234ef28b61067 390 PRINTS PR00173 Glutamate-aspartate symporter signature 122 144 7.7E-9 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS17475 b460376b6e736bb2f01234ef28b61067 390 SUPERFAMILY SSF118215 6 377 2.35E-85 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS17475 b460376b6e736bb2f01234ef28b61067 390 Pfam PF00375 Sodium:dicarboxylate symporter family 6 377 9.3E-79 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS17475 b460376b6e736bb2f01234ef28b61067 390 PANTHER PTHR11958 26 36 1.6E-66 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS17475 b460376b6e736bb2f01234ef28b61067 390 PANTHER PTHR11958 112 387 1.6E-66 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS17475 b460376b6e736bb2f01234ef28b61067 390 Gene3D G3DSA:1.10.3860.10 1 384 2.4E-67 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CLI_RS06800 041fb692ee8aaf875018f13fd7bf9b32 782 Pfam PF02687 FtsX-like permease family 239 356 4.6E-17 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS06800 041fb692ee8aaf875018f13fd7bf9b32 782 Pfam PF02687 FtsX-like permease family 658 774 1.1E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS06800 041fb692ee8aaf875018f13fd7bf9b32 782 PANTHER PTHR30489 237 782 1.5E-16 T 23-04-2016 CLI_RS06800 041fb692ee8aaf875018f13fd7bf9b32 782 PANTHER PTHR30489:SF0 237 782 1.5E-16 T 23-04-2016 CLI_RS10435 3aa2f388d58fe23e62aedafe1dbd78e6 583 Pfam PF10592 AIPR protein 240 554 1.4E-78 T 23-04-2016 IPR018891 Abortive bacteriophage infection, resistance CLI_RS11835 0afbc1492526e0c97ec8648a7ab1ddd8 125 SUPERFAMILY SSF101386 14 75 2.24E-5 T 23-04-2016 CLI_RS07310 ed57e289ea977488258a20ee9b7ac27c 72 SUPERFAMILY SSF47413 3 70 4.15E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS07310 ed57e289ea977488258a20ee9b7ac27c 72 Gene3D G3DSA:1.10.260.40 4 71 4.6E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS07310 ed57e289ea977488258a20ee9b7ac27c 72 Pfam PF12844 Helix-turn-helix domain 4 61 5.4E-8 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS02475 fdcf2bf6abd8149fbf2c2f850ef7b948 211 SUPERFAMILY SSF161098 11 196 3.14E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS02475 fdcf2bf6abd8149fbf2c2f850ef7b948 211 PANTHER PTHR30614:SF11 1 211 2.9E-125 T 23-04-2016 CLI_RS02475 fdcf2bf6abd8149fbf2c2f850ef7b948 211 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 105 9.1E-29 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CLI_RS02475 fdcf2bf6abd8149fbf2c2f850ef7b948 211 Gene3D G3DSA:1.10.3720.10 11 209 1.2E-48 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS02475 fdcf2bf6abd8149fbf2c2f850ef7b948 211 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 209 1.4E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLI_RS02475 fdcf2bf6abd8149fbf2c2f850ef7b948 211 PANTHER PTHR30614 1 211 2.9E-125 T 23-04-2016 CLI_RS12215 9ef805678191cf559298cb5503883105 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 2.1E-37 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12215 9ef805678191cf559298cb5503883105 82 PANTHER PTHR12919 2 79 1.4E-43 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12215 9ef805678191cf559298cb5503883105 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 26.474 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12215 9ef805678191cf559298cb5503883105 82 Pfam PF00886 Ribosomal protein S16 9 67 4.3E-27 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS12215 9ef805678191cf559298cb5503883105 82 Gene3D G3DSA:3.30.1320.10 2 80 9.7E-37 T 23-04-2016 IPR023803 Ribosomal protein S16 domain CLI_RS12215 9ef805678191cf559298cb5503883105 82 SUPERFAMILY SSF54565 2 79 6.93E-35 T 23-04-2016 IPR023803 Ribosomal protein S16 domain CLI_RS12215 9ef805678191cf559298cb5503883105 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 23-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS03705 b7cb7094051c8f6c77e1bf90cd343e27 239 SUPERFAMILY SSF52980 9 124 1.72E-15 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CLI_RS03705 b7cb7094051c8f6c77e1bf90cd343e27 239 Pfam PF04471 Restriction endonuclease 8 124 2.8E-12 T 23-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 CLI_RS03705 b7cb7094051c8f6c77e1bf90cd343e27 239 Gene3D G3DSA:3.40.1350.10 8 124 1.7E-14 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CLI_RS18505 7fd144eebd4a2dae70ff7252f00988b8 143 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 138 5.1E-31 T 23-04-2016 IPR006750 Putative inner membrane exporter, YdcZ CLI_RS18505 7fd144eebd4a2dae70ff7252f00988b8 143 PANTHER PTHR34821 1 140 3.8E-73 T 23-04-2016 CLI_RS18505 7fd144eebd4a2dae70ff7252f00988b8 143 PANTHER PTHR34821:SF3 1 140 3.8E-73 T 23-04-2016 CLI_RS10375 8954f650fa28fe59095070163c87b4eb 97 Pfam PF14242 Domain of unknown function (DUF4342) 7 75 8.2E-18 T 23-04-2016 IPR025642 Domain of unknown function DUF4342 CLI_RS09185 eefdae161bdca95ec680cd31f79a656d 93 Pfam PF00589 Phage integrase family 4 77 2.5E-10 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS09185 eefdae161bdca95ec680cd31f79a656d 93 Gene3D G3DSA:1.10.443.10 3 75 1.2E-10 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS09185 eefdae161bdca95ec680cd31f79a656d 93 SUPERFAMILY SSF56349 3 75 7.36E-10 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLI_RS06745 56ff643700214188d563352671e6fca1 267 Pfam PF10997 Protein of unknown function (DUF2837) 11 263 9.7E-98 T 23-04-2016 IPR021260 Protein of unknown function DUF2837 CLI_RS11975 8d6c05cc47d7b4a1a8e5de4bfac986c1 288 PANTHER PTHR11048 3 252 2.8E-83 T 23-04-2016 CLI_RS11975 8d6c05cc47d7b4a1a8e5de4bfac986c1 288 Pfam PF01040 UbiA prenyltransferase family 33 254 3.8E-23 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 CLI_RS11975 8d6c05cc47d7b4a1a8e5de4bfac986c1 288 PANTHER PTHR11048:SF5 3 252 2.8E-83 T 23-04-2016 CLI_RS05475 6a8a26ba4cdd1265526caf1510fa50d8 78 Pfam PF09851 Short C-terminal domain 51 74 3.5E-7 T 23-04-2016 IPR018649 SHOCT domain CLI_RS06110 683cc38bbb41d9fdc3ee5f3ec68dbcce 269 Pfam PF02535 ZIP Zinc transporter 107 264 1.3E-16 T 23-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CLI_RS06110 683cc38bbb41d9fdc3ee5f3ec68dbcce 269 Pfam PF02535 ZIP Zinc transporter 14 104 1.9E-8 T 23-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CLI_RS06110 683cc38bbb41d9fdc3ee5f3ec68dbcce 269 PANTHER PTHR11040:SF33 1 269 2.4E-128 T 23-04-2016 CLI_RS06110 683cc38bbb41d9fdc3ee5f3ec68dbcce 269 PANTHER PTHR11040 1 269 2.4E-128 T 23-04-2016 CLI_RS10385 f56f814675214ecf08074dbbc0a682d6 429 PANTHER PTHR34043 36 429 7.4E-116 T 23-04-2016 CLI_RS10385 f56f814675214ecf08074dbbc0a682d6 429 SUPERFAMILY SSF53474 40 404 9.89E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS10385 f56f814675214ecf08074dbbc0a682d6 429 Gene3D G3DSA:3.40.50.1820 41 426 4.8E-123 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CLI_RS10385 f56f814675214ecf08074dbbc0a682d6 429 PANTHER PTHR34043:SF1 36 429 7.4E-116 T 23-04-2016 CLI_RS10420 3f3541e16e0113fed6441ecb44429f1b 374 Gene3D G3DSA:3.20.20.70 92 263 1.5E-16 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS10420 3f3541e16e0113fed6441ecb44429f1b 374 SUPERFAMILY SSF102114 90 267 5.23E-16 T 23-04-2016 CLI_RS10420 3f3541e16e0113fed6441ecb44429f1b 374 PANTHER PTHR11228 33 307 1.5E-90 T 23-04-2016 CLI_RS10420 3f3541e16e0113fed6441ecb44429f1b 374 PANTHER PTHR11228 328 340 1.5E-90 T 23-04-2016 CLI_RS10420 3f3541e16e0113fed6441ecb44429f1b 374 PANTHER PTHR11228:SF22 33 307 1.5E-90 T 23-04-2016 CLI_RS10420 3f3541e16e0113fed6441ecb44429f1b 374 PANTHER PTHR11228:SF22 328 340 1.5E-90 T 23-04-2016 CLI_RS13875 2349fe49038ccec076781d8f85872918 171 PANTHER PTHR36834 2 171 2.5E-70 T 23-04-2016 CLI_RS13875 2349fe49038ccec076781d8f85872918 171 PANTHER PTHR36834:SF2 2 171 2.5E-70 T 23-04-2016 CLI_RS13875 2349fe49038ccec076781d8f85872918 171 Pfam PF04892 VanZ like family 14 135 2.7E-21 T 23-04-2016 IPR006976 VanZ-like CLI_RS08485 05dca3efd78aeced5ab9bae1384f6ca6 184 PANTHER PTHR39966 1 183 5.0E-53 T 23-04-2016 CLI_RS08485 05dca3efd78aeced5ab9bae1384f6ca6 184 Gene3D G3DSA:1.20.120.520 4 156 1.2E-19 T 23-04-2016 CLI_RS08485 05dca3efd78aeced5ab9bae1384f6ca6 184 Pfam PF01814 Hemerythrin HHE cation binding domain 3 139 2.1E-15 T 23-04-2016 IPR012312 Haemerythrin-like CLI_RS18325 6ee4be4e26438eda9e37f4d914e363b2 348 PANTHER PTHR37814 1 348 3.7E-142 T 23-04-2016 CLI_RS18325 6ee4be4e26438eda9e37f4d914e363b2 348 PANTHER PTHR37814:SF1 1 348 3.7E-142 T 23-04-2016 CLI_RS12225 cf88a436ff773a5a7cd477d5a66c4760 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 2 98 4.2E-28 T 23-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like CLI_RS12225 cf88a436ff773a5a7cd477d5a66c4760 110 PANTHER PTHR40083 1 108 7.1E-46 T 23-04-2016 CLI_RS12225 cf88a436ff773a5a7cd477d5a66c4760 110 SUPERFAMILY SSF88659 1 93 2.06E-29 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLI_RS12225 cf88a436ff773a5a7cd477d5a66c4760 110 Hamap MF_00245 UPF0122 protein . 1 106 18.623 T 23-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like CLI_RS12225 cf88a436ff773a5a7cd477d5a66c4760 110 Gene3D G3DSA:1.10.10.10 1 96 1.3E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05410 9afb8ab9849f6bf5114ad9afff625ca7 48 Pfam PF12669 Virus attachment protein p12 family 2 42 2.4E-10 T 23-04-2016 CLI_RS17380 dd7977f8a2b38036f28f5a933062eb86 431 Gene3D G3DSA:2.30.42.10 315 376 8.6E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS17380 dd7977f8a2b38036f28f5a933062eb86 431 SUPERFAMILY SSF50156 313 374 6.57E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS17380 dd7977f8a2b38036f28f5a933062eb86 431 Pfam PF13180 PDZ domain 319 362 2.8E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS17380 dd7977f8a2b38036f28f5a933062eb86 431 SMART SM00228 303 377 4.0E-4 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CLI_RS18730 5a9b5a9886c7e3cfb4224abab17a2ed8 334 Pfam PF09991 Predicted membrane protein (DUF2232) 19 313 2.2E-75 T 23-04-2016 IPR018710 Protein of unknown function DUF2232 CLI_RS18730 5a9b5a9886c7e3cfb4224abab17a2ed8 334 PANTHER PTHR41324:SF1 2 330 9.6E-94 T 23-04-2016 CLI_RS18730 5a9b5a9886c7e3cfb4224abab17a2ed8 334 PANTHER PTHR41324 2 330 9.6E-94 T 23-04-2016 CLI_RS04545 172c8191ba2f96ac5a43009a6dbe6d01 151 PANTHER PTHR34821:SF2 1 149 3.1E-47 T 23-04-2016 CLI_RS04545 172c8191ba2f96ac5a43009a6dbe6d01 151 PANTHER PTHR34821 1 149 3.1E-47 T 23-04-2016 CLI_RS04545 172c8191ba2f96ac5a43009a6dbe6d01 151 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 147 2.1E-35 T 23-04-2016 IPR006750 Putative inner membrane exporter, YdcZ CLI_RS16070 86341bf197a87e715e1a70556cc2b974 95 Gene3D G3DSA:1.10.287.1080 8 74 4.8E-8 T 23-04-2016 CLI_RS16070 86341bf197a87e715e1a70556cc2b974 95 SUPERFAMILY SSF101386 12 80 2.29E-8 T 23-04-2016 CLI_RS16070 86341bf197a87e715e1a70556cc2b974 95 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 16 78 1.4E-5 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLI_RS05430 efd20100b8e94fc68f4d137f1c054e99 75 Hamap MF_01506 Small, acid-soluble spore protein Tlp [tlp]. 1 75 29.121 T 23-04-2016 IPR017524 Small acid-soluble spore protein, thioredoxin-like CLI_RS05430 efd20100b8e94fc68f4d137f1c054e99 75 TIGRFAM TIGR03090 SASP_tlp: small, acid-soluble spore protein tlp 3 70 1.9E-28 T 23-04-2016 IPR017524 Small acid-soluble spore protein, thioredoxin-like CLI_RS13315 1ea8edc14d96c9527b5a252cd3d41ee4 145 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 140 3.6E-21 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CLI_RS13315 1ea8edc14d96c9527b5a252cd3d41ee4 145 Pfam PF02050 Flagellar FliJ protein 20 138 1.3E-21 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CLI_RS10665 72a47a8ff5dd9b597e48c5a20669d1d6 120 Pfam PF13788 Domain of unknown function (DUF4180) 9 116 3.3E-33 T 23-04-2016 IPR025438 Domain of unknown function DUF4180 CLI_RS08500 8a92e1de8fedce0afe0712b878e4a124 446 PANTHER PTHR11119 13 442 1.3E-262 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS08500 8a92e1de8fedce0afe0712b878e4a124 446 Pfam PF00860 Permease family 34 403 9.0E-29 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS08500 8a92e1de8fedce0afe0712b878e4a124 446 PANTHER PTHR11119:SF38 13 442 1.3E-262 T 23-04-2016 CLI_RS02080 2aeeb1a65abf87b0be2f431c3710a28d 178 PANTHER PTHR41780:SF1 1 178 3.7E-58 T 23-04-2016 CLI_RS02080 2aeeb1a65abf87b0be2f431c3710a28d 178 PANTHER PTHR41780 1 178 3.7E-58 T 23-04-2016 CLI_RS02080 2aeeb1a65abf87b0be2f431c3710a28d 178 Pfam PF07456 Heptaprenyl diphosphate synthase component I 17 160 3.6E-49 T 23-04-2016 IPR010898 Heptaprenyl diphosphate synthase component I CLI_RS02080 2aeeb1a65abf87b0be2f431c3710a28d 178 PIRSF PIRSF027391 3 178 7.8E-58 T 23-04-2016 IPR014535 Predicted heptaprenyl diphosphate synthase, component I CLI_RS01485 1ecbe26825e520703f559a3a00461d5b 300 SUPERFAMILY SSF55729 27 248 2.95E-36 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS01485 1ecbe26825e520703f559a3a00461d5b 300 PANTHER PTHR23091:SF218 21 188 2.2E-60 T 23-04-2016 CLI_RS01485 1ecbe26825e520703f559a3a00461d5b 300 Gene3D G3DSA:3.40.630.30 26 90 8.7E-8 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS01485 1ecbe26825e520703f559a3a00461d5b 300 Gene3D G3DSA:3.40.630.30 91 145 1.2E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS01485 1ecbe26825e520703f559a3a00461d5b 300 Pfam PF13527 Acetyltransferase (GNAT) domain 31 139 5.8E-13 T 23-04-2016 CLI_RS01485 1ecbe26825e520703f559a3a00461d5b 300 PANTHER PTHR23091 21 188 2.2E-60 T 23-04-2016 CLI_RS05600 7884a1f909adfc450a6a2d5206295397 116 Gene3D G3DSA:3.40.30.10 2 111 9.6E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS05600 7884a1f909adfc450a6a2d5206295397 116 PANTHER PTHR30041 1 113 4.9E-29 T 23-04-2016 CLI_RS05600 7884a1f909adfc450a6a2d5206295397 116 PANTHER PTHR30041:SF3 1 113 4.9E-29 T 23-04-2016 CLI_RS05600 7884a1f909adfc450a6a2d5206295397 116 Pfam PF03960 ArsC family 44 110 9.7E-9 T 23-04-2016 IPR006660 Arsenate reductase-like CLI_RS05600 7884a1f909adfc450a6a2d5206295397 116 SUPERFAMILY SSF52833 2 111 2.72E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS17620 d0b53ec2363500476e254fc4e1b43046 246 Pfam PF15525 Domain of unknown function (DUF4652) 33 238 2.7E-83 T 23-04-2016 IPR028102 Protein of unknown function DUF4652 CLI_RS04435 9dae4ade1cd1c8bd8f9e66548c2cdce7 222 Pfam PF03596 Cadmium resistance transporter 15 221 1.7E-25 T 23-04-2016 IPR004676 Cadmium resistance transporter CLI_RS13940 0876660035418209b82e70d16dbf483c 141 SUPERFAMILY SSF58113 51 139 8.76E-6 T 23-04-2016 CLI_RS13940 0876660035418209b82e70d16dbf483c 141 Gene3D G3DSA:1.20.120.20 42 141 7.2E-6 T 23-04-2016 CLI_RS12270 cc84f26fc51f2dc5882b70345fb87508 166 PANTHER PTHR34374 46 162 2.8E-19 T 23-04-2016 CLI_RS12270 cc84f26fc51f2dc5882b70345fb87508 166 Pfam PF02620 Uncharacterized ACR, COG1399 56 162 1.6E-27 T 23-04-2016 IPR003772 Protein of unknown function DUF177 CLI_RS12900 e83ca3206128c6812c907816de54680e 217 Pfam PF14344 Domain of unknown function (DUF4397) 21 135 3.6E-26 T 23-04-2016 IPR025510 Domain of unknown function DUF4397 CLI_RS12900 e83ca3206128c6812c907816de54680e 217 Pfam PF14344 Domain of unknown function (DUF4397) 120 207 5.5E-19 T 23-04-2016 IPR025510 Domain of unknown function DUF4397 CLI_RS07930 430dcf20acb3a679405e647349f1864f 104 Gene3D G3DSA:3.10.180.10 1 101 6.5E-13 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS07930 430dcf20acb3a679405e647349f1864f 104 SUPERFAMILY SSF54593 1 102 8.25E-15 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS06030 adf387b8a90747625ea28e0525a3b80c 138 Pfam PF09021 HutP 8 133 1.0E-44 T 23-04-2016 IPR015111 Hut operon regulatory protein HutP CLI_RS06030 adf387b8a90747625ea28e0525a3b80c 138 Gene3D G3DSA:3.40.1510.10 4 135 1.2E-21 T 23-04-2016 IPR015111 Hut operon regulatory protein HutP CLI_RS02135 c058ae8f62782e34ec127f13bdd00a70 303 Gene3D G3DSA:3.40.190.10 129 264 1.3E-32 T 23-04-2016 CLI_RS02135 c058ae8f62782e34ec127f13bdd00a70 303 PANTHER PTHR30570 1 303 2.4E-74 T 23-04-2016 CLI_RS02135 c058ae8f62782e34ec127f13bdd00a70 303 SUPERFAMILY SSF53850 43 302 1.42E-57 T 23-04-2016 CLI_RS02135 c058ae8f62782e34ec127f13bdd00a70 303 Pfam PF12849 PBP superfamily domain 33 288 1.4E-29 T 23-04-2016 IPR024370 PBP domain CLI_RS02135 c058ae8f62782e34ec127f13bdd00a70 303 PANTHER PTHR30570:SF1 1 303 2.4E-74 T 23-04-2016 CLI_RS13610 fafcf3f594417c972674b5bf92c8956b 143 Gene3D G3DSA:2.30.290.10 1 142 7.0E-54 T 23-04-2016 IPR024046 Flagellar assembly factor FliW domain CLI_RS13610 fafcf3f594417c972674b5bf92c8956b 143 Pfam PF02623 FliW protein 19 138 1.3E-39 T 23-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 CLI_RS13610 fafcf3f594417c972674b5bf92c8956b 143 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 141 27.073 T 23-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 CLI_RS13610 fafcf3f594417c972674b5bf92c8956b 143 SUPERFAMILY SSF141457 1 141 1.31E-48 T 23-04-2016 IPR024046 Flagellar assembly factor FliW domain CLI_RS13610 fafcf3f594417c972674b5bf92c8956b 143 PANTHER PTHR39190 2 143 5.4E-53 T 23-04-2016 CLI_RS11360 0a3ecbfc60e47b1b0423e10f7d90f8b3 333 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 98 319 7.6E-34 T 23-04-2016 IPR005079 Peptidase C45 CLI_RS11360 0a3ecbfc60e47b1b0423e10f7d90f8b3 333 Gene3D G3DSA:3.60.60.10 90 327 5.2E-37 T 23-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 CLI_RS11360 0a3ecbfc60e47b1b0423e10f7d90f8b3 333 SUPERFAMILY SSF56235 91 312 9.65E-16 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS02255 a519537570c734618c0f1d4923b330e7 308 Pfam PF11155 Domain of unknown function (DUF2935) 9 176 5.4E-45 T 23-04-2016 IPR021328 Protein of unknown function DUF2935 CLI_RS02255 a519537570c734618c0f1d4923b330e7 308 Pfam PF11155 Domain of unknown function (DUF2935) 190 302 2.5E-37 T 23-04-2016 IPR021328 Protein of unknown function DUF2935 CLI_RS02255 a519537570c734618c0f1d4923b330e7 308 SUPERFAMILY SSF158430 116 188 1.44E-41 T 23-04-2016 CLI_RS02255 a519537570c734618c0f1d4923b330e7 308 SUPERFAMILY SSF158430 8 67 1.44E-41 T 23-04-2016 CLI_RS02255 a519537570c734618c0f1d4923b330e7 308 SUPERFAMILY SSF158430 181 306 3.66E-39 T 23-04-2016 CLI_RS04800 71bf1dab241d2e80de1891051ef51be2 181 PANTHER PTHR23091 4 181 1.3E-27 T 23-04-2016 CLI_RS04800 71bf1dab241d2e80de1891051ef51be2 181 Gene3D G3DSA:3.40.630.30 14 180 2.8E-37 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04800 71bf1dab241d2e80de1891051ef51be2 181 Pfam PF00583 Acetyltransferase (GNAT) family 76 155 1.6E-16 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CLI_RS04800 71bf1dab241d2e80de1891051ef51be2 181 PANTHER PTHR23091:SF66 4 181 1.3E-27 T 23-04-2016 CLI_RS04800 71bf1dab241d2e80de1891051ef51be2 181 SUPERFAMILY SSF55729 11 181 5.32E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS02025 218873e2a89fd5dc583bede380cf61ca 224 SUPERFAMILY SSF48317 12 194 1.24E-6 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS02025 218873e2a89fd5dc583bede380cf61ca 224 Pfam PF14378 PAP2 superfamily 51 190 2.5E-8 T 23-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 CLI_RS01420 2cd7c809738d0a375ef860240748168f 640 PANTHER PTHR30489 1 622 8.9E-26 T 23-04-2016 CLI_RS01420 2cd7c809738d0a375ef860240748168f 640 Pfam PF02687 FtsX-like permease family 62 178 1.3E-9 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS01420 2cd7c809738d0a375ef860240748168f 640 PIRSF PIRSF018968 1 635 6.0E-88 T 23-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 CLI_RS06300 9769e979c9ce32bbfbee6178da76abd5 296 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 3 292 9.5E-109 T 23-04-2016 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 CLI_RS06300 9769e979c9ce32bbfbee6178da76abd5 296 PANTHER PTHR30182 4 290 2.9E-127 T 23-04-2016 CLI_RS06300 9769e979c9ce32bbfbee6178da76abd5 296 Pfam PF03313 Serine dehydratase alpha chain 15 276 1.2E-74 T 23-04-2016 IPR005130 Serine dehydratase-like, alpha subunit CLI_RS10890 e6f929f973180e846674b052d8b927b1 551 Gene3D G3DSA:3.40.50.300 47 210 1.1E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10890 e6f929f973180e846674b052d8b927b1 551 SUPERFAMILY SSF52540 12 185 3.42E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10890 e6f929f973180e846674b052d8b927b1 551 SUPERFAMILY SSF52540 227 315 3.42E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 SUPERFAMILY SSF51735 3 248 2.86E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 Gene3D G3DSA:3.40.50.720 4 247 4.4E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 5.6E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 5.6E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 5.6E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 5.6E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 5.6E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 PANTHER PTHR24322 6 130 3.5E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 PANTHER PTHR24322 146 182 3.5E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.7E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.7E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.7E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS11190 47f93758991362f92d74c519832b0c8c 265 Pfam PF00106 short chain dehydrogenase 3 192 2.5E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CLI_RS05415 7d9641f72c58687012e094ce04201c70 229 Gene3D G3DSA:3.30.240.20 82 155 3.3E-27 T 23-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLI_RS05415 7d9641f72c58687012e094ce04201c70 229 PANTHER PTHR34582:SF6 5 229 4.3E-59 T 23-04-2016 CLI_RS05415 7d9641f72c58687012e094ce04201c70 229 PANTHER PTHR34582 5 229 4.3E-59 T 23-04-2016 CLI_RS05415 7d9641f72c58687012e094ce04201c70 229 Pfam PF04239 Protein of unknown function (DUF421) 89 204 1.8E-35 T 23-04-2016 IPR007353 Protein of unknown function DUF421 CLI_RS05415 7d9641f72c58687012e094ce04201c70 229 Gene3D G3DSA:3.30.240.20 174 228 3.5E-18 T 23-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLI_RS12995 e6859d1b613c497c90f78904abcb6112 162 Pfam PF12821 Threonine/Serine exporter, ThrE 6 134 3.2E-38 T 23-04-2016 IPR024528 Threonine/Serine exporter, ThrE CLI_RS12995 e6859d1b613c497c90f78904abcb6112 162 PANTHER PTHR34390 1 159 2.0E-49 T 23-04-2016 CLI_RS09095 b61cb6406b6bcfe3d0af5427accb0734 170 Pfam PF11167 Protein of unknown function (DUF2953) 91 135 3.9E-11 T 23-04-2016 IPR021338 Protein of unknown function DUF2953 CLI_RS17015 b0de01e78855bdae0d7176141c502d97 385 PANTHER PTHR12155 13 167 7.6E-23 T 23-04-2016 IPR029684 Schlafen family CLI_RS17015 b0de01e78855bdae0d7176141c502d97 385 Pfam PF04326 Putative DNA-binding domain 14 134 7.9E-25 T 23-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 CLI_RS05875 33e310306f789ca59a57292ab98ce318 259 SUPERFAMILY SSF52151 15 252 5.75E-7 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CLI_RS05895 7cd6bd8c9036aee972f87b3196ae296d 442 PIRSF PIRSF033563 1 442 3.6E-138 T 23-04-2016 IPR008323 Uncharacterised conserved protein UCP033563 CLI_RS05895 7cd6bd8c9036aee972f87b3196ae296d 442 PANTHER PTHR36454 1 291 9.0E-163 T 23-04-2016 CLI_RS05895 7cd6bd8c9036aee972f87b3196ae296d 442 PANTHER PTHR36454 311 442 9.0E-163 T 23-04-2016 CLI_RS05895 7cd6bd8c9036aee972f87b3196ae296d 442 PANTHER PTHR36454:SF1 1 291 9.0E-163 T 23-04-2016 CLI_RS05895 7cd6bd8c9036aee972f87b3196ae296d 442 PANTHER PTHR36454:SF1 311 442 9.0E-163 T 23-04-2016 CLI_RS05895 7cd6bd8c9036aee972f87b3196ae296d 442 Pfam PF06245 Protein of unknown function (DUF1015) 4 440 6.3E-135 T 23-04-2016 IPR008323 Uncharacterised conserved protein UCP033563 CLI_RS03055 8297e073cc96a660a3be2615f94752ab 263 SMART SM00994 7 46 7.6E-5 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CLI_RS03055 8297e073cc96a660a3be2615f94752ab 263 Pfam PF14470 Bacterial PH domain 113 216 5.0E-10 T 23-04-2016 CLI_RS03055 8297e073cc96a660a3be2615f94752ab 263 Pfam PF09851 Short C-terminal domain 234 261 2.7E-10 T 23-04-2016 IPR018649 SHOCT domain CLI_RS08740 57e2d35f386a845b0ddb3dd742ac65c5 326 SUPERFAMILY SSF56349 15 318 4.71E-51 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLI_RS08740 57e2d35f386a845b0ddb3dd742ac65c5 326 Gene3D G3DSA:1.10.150.130 15 129 1.2E-16 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CLI_RS08740 57e2d35f386a845b0ddb3dd742ac65c5 326 Gene3D G3DSA:1.10.443.10 142 318 1.2E-50 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS08740 57e2d35f386a845b0ddb3dd742ac65c5 326 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 50 1.9E-5 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLI_RS08740 57e2d35f386a845b0ddb3dd742ac65c5 326 PANTHER PTHR30349 15 49 4.6E-66 T 23-04-2016 CLI_RS08740 57e2d35f386a845b0ddb3dd742ac65c5 326 PANTHER PTHR30349 71 319 4.6E-66 T 23-04-2016 CLI_RS08740 57e2d35f386a845b0ddb3dd742ac65c5 326 PANTHER PTHR30349:SF5 15 49 4.6E-66 T 23-04-2016 CLI_RS08740 57e2d35f386a845b0ddb3dd742ac65c5 326 PANTHER PTHR30349:SF5 71 319 4.6E-66 T 23-04-2016 CLI_RS08740 57e2d35f386a845b0ddb3dd742ac65c5 326 Pfam PF00589 Phage integrase family 142 310 1.9E-41 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS08740 57e2d35f386a845b0ddb3dd742ac65c5 326 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 325 24.871 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD CLI_RS15920 0c4866ea5d96117c8724e78429d662ab 307 Pfam PF14594 Siphovirus ReqiPepy6 Gp37-like protein 2 292 1.0E-71 T 23-04-2016 IPR029432 Siphovirus Gp37-like protein CLI_RS07415 aa6710112031052479b40c25bd84f764 399 Gene3D G3DSA:1.20.1090.10 197 398 2.0E-45 T 23-04-2016 CLI_RS07415 aa6710112031052479b40c25bd84f764 399 PANTHER PTHR11496 1 398 1.6E-209 T 23-04-2016 CLI_RS07415 aa6710112031052479b40c25bd84f764 399 SUPERFAMILY SSF56796 14 397 4.58E-99 T 23-04-2016 CLI_RS07415 aa6710112031052479b40c25bd84f764 399 Pfam PF00465 Iron-containing alcohol dehydrogenase 18 375 3.2E-91 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 CLI_RS07415 aa6710112031052479b40c25bd84f764 399 PANTHER PTHR11496:SF69 1 398 1.6E-209 T 23-04-2016 CLI_RS07415 aa6710112031052479b40c25bd84f764 399 Gene3D G3DSA:3.40.50.1970 18 196 8.5E-53 T 23-04-2016 CLI_RS06690 cbf3ce5c0e0d9e450a65aea60681e85a 78 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 7 72 2.8E-23 T 23-04-2016 IPR018680 Protein of unknown function DUF2164 CLI_RS02090 9263445e90c5f352143fe123cac1c303 344 SUPERFAMILY SSF143631 29 332 3.92E-98 T 23-04-2016 IPR003374 ApbE-like domain CLI_RS02090 9263445e90c5f352143fe123cac1c303 344 PIRSF PIRSF006268 2 337 9.6E-112 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 CLI_RS02090 9263445e90c5f352143fe123cac1c303 344 PANTHER PTHR30040:SF2 1 339 1.8E-149 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 CLI_RS02090 9263445e90c5f352143fe123cac1c303 344 PANTHER PTHR30040 1 339 1.8E-149 T 23-04-2016 CLI_RS02090 9263445e90c5f352143fe123cac1c303 344 Pfam PF02424 ApbE family 37 315 1.2E-85 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 CLI_RS05175 9356e9b4d35be8a673595cc1b6d660bc 163 Gene3D G3DSA:2.40.128.20 55 137 1.4E-5 T 23-04-2016 IPR012674 Calycin CLI_RS12745 ba5040b228818dce31844dc8ad7ba178 65 Gene3D G3DSA:3.40.630.30 13 64 8.0E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS10410 330236eddbb07dbcf347d69f4f73ec8b 423 PANTHER PTHR30569 1 419 2.1E-112 T 23-04-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 CLI_RS10410 330236eddbb07dbcf347d69f4f73ec8b 423 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 17 384 4.0E-55 T 23-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CLI_RS07675 4f31691d753c0e2f8f690d1d5e411b19 465 PANTHER PTHR33451:SF4 3 464 6.9E-234 T 23-04-2016 CLI_RS07675 4f31691d753c0e2f8f690d1d5e411b19 465 PANTHER PTHR33451 3 464 6.9E-234 T 23-04-2016 CLI_RS07675 4f31691d753c0e2f8f690d1d5e411b19 465 Pfam PF03553 Na+/H+ antiporter family 243 430 4.3E-5 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CLI_RS07675 4f31691d753c0e2f8f690d1d5e411b19 465 Pfam PF03553 Na+/H+ antiporter family 30 220 9.1E-18 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CLI_RS08465 01927602cca07e9f4819d37c1217326a 53 Gene3D G3DSA:3.30.160.160 6 43 7.9E-12 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 CLI_RS08465 01927602cca07e9f4819d37c1217326a 53 SUPERFAMILY SSF160113 6 45 7.06E-9 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 CLI_RS08465 01927602cca07e9f4819d37c1217326a 53 Pfam PF07411 Domain of unknown function (DUF1508) 13 42 1.3E-4 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 CLI_RS10680 052b736bd5a0577b53a024e2d2c42b6f 903 Pfam PF13620 Carboxypeptidase regulatory-like domain 297 388 8.5E-9 T 23-04-2016 CLI_RS10680 052b736bd5a0577b53a024e2d2c42b6f 903 Pfam PF00746 Gram positive anchor 868 898 5.0E-4 T 23-04-2016 IPR019948 Gram-positive anchor CLI_RS10680 052b736bd5a0577b53a024e2d2c42b6f 903 Gene3D G3DSA:3.20.20.140 494 674 2.2E-6 T 23-04-2016 CLI_RS10680 052b736bd5a0577b53a024e2d2c42b6f 903 Gene3D G3DSA:2.60.40.1120 297 406 2.8E-11 T 23-04-2016 IPR014766 Carboxypeptidase, regulatory domain CLI_RS10680 052b736bd5a0577b53a024e2d2c42b6f 903 SUPERFAMILY SSF89550 493 711 3.14E-28 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CLI_RS10680 052b736bd5a0577b53a024e2d2c42b6f 903 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 868 902 6.4E-5 T 23-04-2016 IPR019931 LPXTG cell wall anchor domain CLI_RS10680 052b736bd5a0577b53a024e2d2c42b6f 903 SUPERFAMILY SSF49464 296 411 1.06E-11 T 23-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain CLI_RS10830 080521bcb769c71bcb861bf4db0b2a97 173 Pfam PF16107 Domain of unknown function (DUF4825) 45 143 2.5E-26 T 23-04-2016 IPR032250 Domain of unknown function DUF4825 CLI_RS18385 30816b2aaee276a2d182a5193c3a3475 167 Pfam PF02810 SEC-C motif 147 165 2.3E-10 T 23-04-2016 IPR004027 SEC-C motif CLI_RS18385 30816b2aaee276a2d182a5193c3a3475 167 PANTHER PTHR33747 1 165 1.3E-41 T 23-04-2016 CLI_RS18385 30816b2aaee276a2d182a5193c3a3475 167 SUPERFAMILY SSF103642 144 165 4.25E-8 T 23-04-2016 CLI_RS18385 30816b2aaee276a2d182a5193c3a3475 167 Gene3D G3DSA:3.10.450.50 123 165 4.7E-14 T 23-04-2016 IPR032710 NTF2-like domain CLI_RS18385 30816b2aaee276a2d182a5193c3a3475 167 PANTHER PTHR33747:SF1 1 165 1.3E-41 T 23-04-2016 CLI_RS10310 44f8d340b33c1b37a0c548f1e65b2ca8 703 SUPERFAMILY SSF52540 152 216 2.59E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10310 44f8d340b33c1b37a0c548f1e65b2ca8 703 SUPERFAMILY SSF52540 364 476 2.59E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10310 44f8d340b33c1b37a0c548f1e65b2ca8 703 Gene3D G3DSA:3.40.50.300 180 253 2.3E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10310 44f8d340b33c1b37a0c548f1e65b2ca8 703 Gene3D G3DSA:3.40.50.300 361 467 2.3E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03815 ea70444b98e27909f98420a6812e0c1a 92 Gene3D G3DSA:3.20.20.100 3 72 1.0E-8 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS03815 ea70444b98e27909f98420a6812e0c1a 92 SUPERFAMILY SSF51430 4 68 4.98E-8 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CLI_RS03525 3fe3048f48809fa00c02d9fb524fd258 194 Pfam PF03352 Methyladenine glycosylase 9 184 2.0E-76 T 23-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CLI_RS03525 3fe3048f48809fa00c02d9fb524fd258 194 SUPERFAMILY SSF48150 5 186 1.24E-75 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CLI_RS03525 3fe3048f48809fa00c02d9fb524fd258 194 PANTHER PTHR30037 2 187 4.5E-97 T 23-04-2016 CLI_RS03525 3fe3048f48809fa00c02d9fb524fd258 194 PANTHER PTHR30037:SF4 2 187 4.5E-97 T 23-04-2016 CLI_RS03525 3fe3048f48809fa00c02d9fb524fd258 194 Gene3D G3DSA:1.10.340.30 5 185 2.1E-79 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CLI_RS12725 d4b51e2f1aa8fd732dbd9077f01ba97d 59 Pfam PF09388 Spo0E like sporulation regulatory protein 7 50 2.5E-10 T 23-04-2016 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 CLI_RS12725 d4b51e2f1aa8fd732dbd9077f01ba97d 59 SUPERFAMILY SSF140500 3 55 3.92E-7 T 23-04-2016 CLI_RS04210 c5b01edc4527e740fe0cdce97a68a65f 259 Pfam PF07155 ECF-type riboflavin transporter, S component 5 160 1.2E-10 T 23-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 CLI_RS02935 f93e4f021d6606048620c3dc499e8908 67 PANTHER PTHR10245:SF61 3 67 3.7E-32 T 23-04-2016 CLI_RS02935 f93e4f021d6606048620c3dc499e8908 67 PANTHER PTHR10245 3 67 3.7E-32 T 23-04-2016 CLI_RS02935 f93e4f021d6606048620c3dc499e8908 67 Pfam PF01381 Helix-turn-helix 8 62 1.9E-16 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS02935 f93e4f021d6606048620c3dc499e8908 67 Gene3D G3DSA:1.10.260.40 4 67 3.7E-25 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS02935 f93e4f021d6606048620c3dc499e8908 67 SMART SM00530 7 62 1.6E-16 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLI_RS02935 f93e4f021d6606048620c3dc499e8908 67 SUPERFAMILY SSF47413 4 66 2.95E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLI_RS18365 629c6812d721d6c4498e79b8564187b6 182 SUPERFAMILY SSF55144 1 179 7.15E-22 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase CLI_RS18365 629c6812d721d6c4498e79b8564187b6 182 Gene3D G3DSA:3.90.1140.10 1 176 5.4E-18 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase CLI_RS18365 629c6812d721d6c4498e79b8564187b6 182 Pfam PF13563 2'-5' RNA ligase superfamily 14 163 8.3E-10 T 23-04-2016 CLI_RS12735 69ff85e4808e2629364e4db70b10826c 222 PANTHER PTHR38463 5 221 1.1E-58 T 23-04-2016 CLI_RS12735 69ff85e4808e2629364e4db70b10826c 222 Pfam PF09557 Domain of unknown function (DUF2382) 95 200 3.8E-27 T 23-04-2016 IPR019060 Domain of unknown function DUF2382 CLI_RS12735 69ff85e4808e2629364e4db70b10826c 222 PANTHER PTHR38463:SF1 5 221 1.1E-58 T 23-04-2016 CLI_RS12735 69ff85e4808e2629364e4db70b10826c 222 TIGRFAM TIGR02271 TIGR02271: conserved domain 95 208 3.6E-30 T 23-04-2016 IPR019060 Domain of unknown function DUF2382 CLI_RS17775 853dc3c6eb3887041b5ed6cf51e06a87 61 Gene3D G3DSA:4.10.830.10 2 61 2.1E-25 T 23-04-2016 CLI_RS17775 853dc3c6eb3887041b5ed6cf51e06a87 61 SUPERFAMILY SSF57716 6 61 4.56E-20 T 23-04-2016 CLI_RS17775 853dc3c6eb3887041b5ed6cf51e06a87 61 PANTHER PTHR19836 2 61 2.2E-34 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17775 853dc3c6eb3887041b5ed6cf51e06a87 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 1.9E-26 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLI_RS17775 853dc3c6eb3887041b5ed6cf51e06a87 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 24.636 T 23-04-2016 IPR023053 Ribosomal protein S14, type Z CLI_RS04685 db0742241484e23bbfd0dcf2ae97bff6 363 Pfam PF13353 4Fe-4S single cluster domain 69 156 4.8E-9 T 23-04-2016 CLI_RS04685 db0742241484e23bbfd0dcf2ae97bff6 363 SUPERFAMILY SSF102114 58 350 3.92E-46 T 23-04-2016 CLI_RS04685 db0742241484e23bbfd0dcf2ae97bff6 363 PANTHER PTHR11228 10 339 1.2E-59 T 23-04-2016 CLI_RS04685 db0742241484e23bbfd0dcf2ae97bff6 363 Pfam PF04055 Radical SAM superfamily 67 202 6.4E-10 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CLI_RS04685 db0742241484e23bbfd0dcf2ae97bff6 363 Gene3D G3DSA:3.20.20.70 59 348 1.1E-39 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS04685 db0742241484e23bbfd0dcf2ae97bff6 363 PANTHER PTHR11228:SF19 10 339 1.2E-59 T 23-04-2016 CLI_RS08250 268bbd66066c2765584b79b9c817fbcd 207 Pfam PF02659 Putative manganese efflux pump 50 203 4.0E-12 T 23-04-2016 IPR003810 Putative manganese efflux pump CLI_RS08250 268bbd66066c2765584b79b9c817fbcd 207 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 3 206 6.6E-66 T 23-04-2016 IPR014205 Sporulation protein YtaF CLI_RS00150 b7629e862381e1031f9d53fd54c49c55 106 PANTHER PTHR38664:SF1 1 106 2.6E-27 T 23-04-2016 CLI_RS00150 b7629e862381e1031f9d53fd54c49c55 106 PANTHER PTHR38664 1 106 2.6E-27 T 23-04-2016 CLI_RS02530 92b5059b385cfa01c4ef7fe4c22eaf26 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 30 293 4.4E-48 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLI_RS02530 92b5059b385cfa01c4ef7fe4c22eaf26 314 PANTHER PTHR30482:SF10 1 308 1.3E-136 T 23-04-2016 CLI_RS02530 92b5059b385cfa01c4ef7fe4c22eaf26 314 PANTHER PTHR30482 1 308 1.3E-136 T 23-04-2016 CLI_RS02165 94df3ea608bcc5108fdb34da1a3189be 184 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 19 181 3.3E-26 T 23-04-2016 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like CLI_RS02165 94df3ea608bcc5108fdb34da1a3189be 184 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 11 183 3.2E-51 T 23-04-2016 IPR014247 Sporulation lipoprotein YhcN/YlaJ CLI_RS15950 dc4e483e9b2d2c4daa93419a13563647 127 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 11 92 1.1E-9 T 23-04-2016 IPR010064 Bacteriophage HK97-gp10, putative tail-component CLI_RS15950 dc4e483e9b2d2c4daa93419a13563647 127 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 7 125 2.5E-27 T 23-04-2016 IPR010064 Bacteriophage HK97-gp10, putative tail-component CLI_RS14880 96235d6b61d79ff8d04e49ab17116e0b 237 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 4 220 4.0E-66 T 23-04-2016 IPR018768 Domain of unknown function DUF2344 CLI_RS14880 96235d6b61d79ff8d04e49ab17116e0b 237 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 4 190 5.0E-54 T 23-04-2016 IPR018768 Domain of unknown function DUF2344 CLI_RS13470 d2d921462ba982d9144a87812ca3b454 58 Pfam PF14070 Putative motility protein 3 56 4.4E-19 T 23-04-2016 IPR025906 Putative motility protein CLI_RS15770 e6ddbc4af5d548b409fd434c6e2ff382 175 Pfam PF14277 Domain of unknown function (DUF4364) 11 169 7.1E-47 T 23-04-2016 IPR025374 Protein of unknown function DUF4364 CLI_RS15770 e6ddbc4af5d548b409fd434c6e2ff382 175 Gene3D G3DSA:1.10.10.10 28 86 5.0E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08125 5483d3959613ccdf6996e63c19eeb916 418 Pfam PF04143 Sulphur transport 46 406 1.0E-76 T 23-04-2016 IPR007272 Sulphur transport domain CLI_RS08125 5483d3959613ccdf6996e63c19eeb916 418 PANTHER PTHR30574:SF5 252 418 1.1E-110 T 23-04-2016 CLI_RS08125 5483d3959613ccdf6996e63c19eeb916 418 PANTHER PTHR30574:SF5 19 217 1.1E-110 T 23-04-2016 CLI_RS08125 5483d3959613ccdf6996e63c19eeb916 418 PANTHER PTHR30574 252 418 1.1E-110 T 23-04-2016 CLI_RS08125 5483d3959613ccdf6996e63c19eeb916 418 PANTHER PTHR30574 19 217 1.1E-110 T 23-04-2016 CLI_RS03075 28d60e67e4f7b4cf2634acacfea2218f 116 Gene3D G3DSA:2.40.50.140 6 115 8.5E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS03075 28d60e67e4f7b4cf2634acacfea2218f 116 SUPERFAMILY SSF50249 9 115 3.67E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CLI_RS03075 28d60e67e4f7b4cf2634acacfea2218f 116 PANTHER PTHR11586 2 115 6.6E-29 T 23-04-2016 CLI_RS03075 28d60e67e4f7b4cf2634acacfea2218f 116 Pfam PF01588 Putative tRNA binding domain 19 113 2.7E-17 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 CLI_RS02860 8b0022ef285ff22539f984395bf9f0c4 457 Pfam PF13520 Amino acid permease 11 411 6.5E-57 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS02860 8b0022ef285ff22539f984395bf9f0c4 457 PANTHER PTHR11785 2 457 5.1E-207 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS02860 8b0022ef285ff22539f984395bf9f0c4 457 PANTHER PTHR11785:SF259 2 457 5.1E-207 T 23-04-2016 CLI_RS02860 8b0022ef285ff22539f984395bf9f0c4 457 PIRSF PIRSF006060 1 453 6.0E-72 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLI_RS16785 e97b08e32853baff910a5121ed8a90d7 56 Pfam PF13451 Probable zinc-ribbon domain 3 49 1.6E-26 T 23-04-2016 IPR025306 Probable zinc-binding domain CLI_RS04440 433ca031585ee4dc7f2c1a016bd9315e 138 PANTHER PTHR30087:SF1 1 138 8.6E-58 T 23-04-2016 CLI_RS04440 433ca031585ee4dc7f2c1a016bd9315e 138 Pfam PF04463 Protein of unknown function (DUF523) 3 136 2.2E-38 T 23-04-2016 IPR007553 Domain of unknown function DUF523 CLI_RS04440 433ca031585ee4dc7f2c1a016bd9315e 138 PANTHER PTHR30087 1 138 8.6E-58 T 23-04-2016 CLI_RS01375 1a6117eadfb0e451eb81705aaec52c19 59 Gene3D G3DSA:3.20.20.70 1 45 1.1E-6 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS01375 1a6117eadfb0e451eb81705aaec52c19 59 SUPERFAMILY SSF51395 1 44 3.13E-5 T 23-04-2016 CLI_RS11730 f83cb4973573e532b147d472e362447d 324 PANTHER PTHR34700 2 273 1.1E-66 T 23-04-2016 CLI_RS11730 f83cb4973573e532b147d472e362447d 324 PANTHER PTHR34700:SF1 2 273 1.1E-66 T 23-04-2016 CLI_RS11730 f83cb4973573e532b147d472e362447d 324 SUPERFAMILY SSF69279 38 132 1.59E-8 T 23-04-2016 CLI_RS11390 7fb3b2cee88e6d96a7ac97091d34f9ed 55 Pfam PF09388 Spo0E like sporulation regulatory protein 7 49 1.3E-11 T 23-04-2016 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 CLI_RS11390 7fb3b2cee88e6d96a7ac97091d34f9ed 55 SUPERFAMILY SSF140500 5 54 1.44E-10 T 23-04-2016 CLI_RS09190 0c022dd3a0b5cc2b666be214f01b140d 195 Pfam PF11611 Domain of unknown function (DUF4352) 57 183 1.3E-12 T 23-04-2016 IPR029051 Domain of unknown function DUF4352 CLI_RS09190 0c022dd3a0b5cc2b666be214f01b140d 195 Gene3D G3DSA:2.60.40.1240 57 194 4.1E-8 T 23-04-2016 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain CLI_RS10755 859f2bd5d658bf4b4847cc4b05605891 117 Pfam PF17032 zinc-ribbon family 21 77 2.7E-8 T 23-04-2016 IPR031493 Zinc-ribbon 15 CLI_RS14230 9c68c3a8bf0ceb81fec22c6650f03662 109 SUPERFAMILY SSF51658 3 106 6.63E-13 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS14230 9c68c3a8bf0ceb81fec22c6650f03662 109 Gene3D G3DSA:3.20.20.150 16 105 4.5E-11 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS12425 3af77e22717393097f2c67fcc6068280 175 Pfam PF03773 Predicted permease 41 169 2.1E-14 T 23-04-2016 IPR005524 Predicted permease DUF318 CLI_RS07485 0e4ac6b8905a9c3c242504ab6b15c4f8 212 PANTHER PTHR20855 6 212 1.4E-63 T 23-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CLI_RS07485 0e4ac6b8905a9c3c242504ab6b15c4f8 212 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 10 209 8.6E-65 T 23-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 CLI_RS07485 0e4ac6b8905a9c3c242504ab6b15c4f8 212 Pfam PF03006 Haemolysin-III related 8 203 6.7E-39 T 23-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CLI_RS07485 0e4ac6b8905a9c3c242504ab6b15c4f8 212 PANTHER PTHR20855:SF3 6 212 1.4E-63 T 23-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 CLI_RS13475 c4da541fdcac7def013223fc33f64d3d 57 SUPERFAMILY SSF140500 5 54 1.14E-6 T 23-04-2016 CLI_RS13475 c4da541fdcac7def013223fc33f64d3d 57 Pfam PF09388 Spo0E like sporulation regulatory protein 8 52 3.8E-6 T 23-04-2016 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 CLI_RS02350 bf804dba4fd07803b0a1adc5f122ada4 588 PANTHER PTHR33451 43 584 2.5E-244 T 23-04-2016 CLI_RS02350 bf804dba4fd07803b0a1adc5f122ada4 588 Pfam PF03553 Na+/H+ antiporter family 23 199 2.2E-6 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CLI_RS02350 bf804dba4fd07803b0a1adc5f122ada4 588 Pfam PF03553 Na+/H+ antiporter family 206 538 2.2E-61 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CLI_RS02350 bf804dba4fd07803b0a1adc5f122ada4 588 PANTHER PTHR33451:SF7 43 584 2.5E-244 T 23-04-2016 CLI_RS04990 ce5ff395fad135c0cb920ee08b0b80d4 113 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 79 109 6.4E-5 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 CLI_RS04990 ce5ff395fad135c0cb920ee08b0b80d4 113 Gene3D G3DSA:3.30.1390.10 79 109 2.0E-5 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLI_RS02330 5812ade6ecc6af0439bed69816d75f18 452 Pfam PF00682 HMGL-like 49 324 4.4E-27 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLI_RS02330 5812ade6ecc6af0439bed69816d75f18 452 SUPERFAMILY SSF51569 41 342 2.01E-57 T 23-04-2016 CLI_RS02330 5812ade6ecc6af0439bed69816d75f18 452 PANTHER PTHR10277 13 447 1.6E-245 T 23-04-2016 CLI_RS02330 5812ade6ecc6af0439bed69816d75f18 452 Gene3D G3DSA:3.20.20.70 35 395 7.1E-70 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CLI_RS02330 5812ade6ecc6af0439bed69816d75f18 452 PANTHER PTHR10277:SF46 13 447 1.6E-245 T 23-04-2016 CLI_RS00095 d9b12e96ea62b98cdcd4e7391ab8bae8 465 Gene3D G3DSA:3.50.50.60 1 207 3.5E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS00095 d9b12e96ea62b98cdcd4e7391ab8bae8 465 SUPERFAMILY SSF51905 300 360 1.49E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS00095 d9b12e96ea62b98cdcd4e7391ab8bae8 465 SUPERFAMILY SSF51905 2 217 1.49E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLI_RS00095 d9b12e96ea62b98cdcd4e7391ab8bae8 465 Pfam PF01266 FAD dependent oxidoreductase 4 210 2.6E-29 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CLI_RS00095 d9b12e96ea62b98cdcd4e7391ab8bae8 465 PANTHER PTHR13847 1 427 2.2E-133 T 23-04-2016 CLI_RS00095 d9b12e96ea62b98cdcd4e7391ab8bae8 465 PANTHER PTHR13847:SF150 1 427 2.2E-133 T 23-04-2016 CLI_RS00095 d9b12e96ea62b98cdcd4e7391ab8bae8 465 Pfam PF04324 BFD-like [2Fe-2S] binding domain 382 436 7.9E-16 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain CLI_RS13790 cb18e5776b14bacc79f0bccf7f26cd73 390 PANTHER PTHR32507 1 390 1.7E-146 T 23-04-2016 CLI_RS13790 cb18e5776b14bacc79f0bccf7f26cd73 390 Pfam PF00999 Sodium/hydrogen exchanger family 8 380 2.3E-40 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CLI_RS13790 cb18e5776b14bacc79f0bccf7f26cd73 390 PANTHER PTHR32507:SF10 1 390 1.7E-146 T 23-04-2016 CLI_RS17725 b2a4f16352873b4416a68cbd3c9d2b79 93 SUPERFAMILY SSF50104 4 82 1.44E-14 T 23-04-2016 IPR008991 Translation protein SH3-like domain CLI_RS17725 b2a4f16352873b4416a68cbd3c9d2b79 93 Gene3D G3DSA:2.30.30.30 4 92 9.4E-16 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CLI_RS02730 3ab258caf8eec1a466434fe498c9cafc 164 Gene3D G3DSA:3.40.30.10 2 163 4.7E-47 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS02730 3ab258caf8eec1a466434fe498c9cafc 164 Hamap MF_00269 Probable thiol peroxidase [tpx]. 2 161 35.25 T 23-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 CLI_RS02730 3ab258caf8eec1a466434fe498c9cafc 164 Pfam PF00578 AhpC/TSA family 19 140 3.4E-20 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 CLI_RS02730 3ab258caf8eec1a466434fe498c9cafc 164 PANTHER PTHR10681:SF81 2 162 2.3E-52 T 23-04-2016 CLI_RS02730 3ab258caf8eec1a466434fe498c9cafc 164 ProSitePatterns PS01265 Tpx family signature. 81 92 - T 23-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 CLI_RS02730 3ab258caf8eec1a466434fe498c9cafc 164 SUPERFAMILY SSF52833 3 158 8.11E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS02730 3ab258caf8eec1a466434fe498c9cafc 164 PANTHER PTHR10681 2 162 2.3E-52 T 23-04-2016 CLI_RS07475 0d0ee86baae956a776222533cf54e64a 304 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 4 299 3.8E-97 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 CLI_RS07475 0d0ee86baae956a776222533cf54e64a 304 Pfam PF02445 Quinolinate synthetase A protein 8 298 5.0E-114 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 CLI_RS07475 0d0ee86baae956a776222533cf54e64a 304 SUPERFAMILY SSF142754 4 300 1.15E-109 T 23-04-2016 CLI_RS07475 0d0ee86baae956a776222533cf54e64a 304 PANTHER PTHR30573 2 298 6.6E-135 T 23-04-2016 CLI_RS03890 21fd055860c16a1f65dbf88c6ee20224 208 Gene3D G3DSA:3.40.50.880 5 177 1.0E-27 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS03890 21fd055860c16a1f65dbf88c6ee20224 208 Pfam PF01965 DJ-1/PfpI family 5 167 1.9E-21 T 23-04-2016 IPR002818 DJ-1/PfpI CLI_RS03890 21fd055860c16a1f65dbf88c6ee20224 208 SUPERFAMILY SSF52317 5 177 4.23E-27 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CLI_RS04150 ef5032ff015729656a7cc2d649d59190 263 Pfam PF12730 ABC-2 family transporter protein 4 203 3.1E-15 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 CLI_RS11855 f3245e6635f702f04018ca0d7698ebc8 341 Pfam PF04245 37-kD nucleoid-associated bacterial protein 13 339 7.9E-60 T 23-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CLI_RS03975 6803a652661ee43b2696e5436ae1c2af 59 Pfam PF12841 YvrJ protein family 8 42 1.6E-18 T 23-04-2016 IPR024419 Protein of unknown function YvrJ CLI_RS00195 1801c0a6554a0a0acc30a8e798f6c63c 87 Pfam PF10704 Protein of unknown function (DUF2508) 9 75 5.1E-15 T 23-04-2016 IPR019644 Protein of unknown function DUF2508 CLI_RS16100 f1dc9bc2f8101983543f5ae7e78e39ba 68 Pfam PF13619 KTSC domain 7 62 2.1E-22 T 23-04-2016 IPR025309 KTSC domain CLI_RS04100 07fc3fa2af883c1df3889df18513894b 324 SUPERFAMILY SSF55831 8 269 7.85E-51 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CLI_RS04100 07fc3fa2af883c1df3889df18513894b 324 Gene3D G3DSA:3.30.572.10 2 240 4.9E-50 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CLI_RS04100 07fc3fa2af883c1df3889df18513894b 324 Pfam PF00303 Thymidylate synthase 51 251 1.9E-19 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CLI_RS02570 f64e68b2bbd6388f884cdcbd0f47813c 286 PANTHER PTHR30373:SF2 1 274 2.5E-84 T 23-04-2016 CLI_RS02570 f64e68b2bbd6388f884cdcbd0f47813c 286 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 45 164 5.1E-35 T 23-04-2016 IPR007621 TPM domain CLI_RS02570 f64e68b2bbd6388f884cdcbd0f47813c 286 PANTHER PTHR30373 1 274 2.5E-84 T 23-04-2016 CLI_RS16060 f1d7f7dad57b3082d8535c2740c15a6c 152 Gene3D G3DSA:3.40.50.150 3 134 1.2E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS16060 f1d7f7dad57b3082d8535c2740c15a6c 152 SUPERFAMILY SSF53335 4 151 4.45E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLI_RS04480 219d6f2a810d333f83e5e7b1cb34aa35 36 Gene3D G3DSA:1.20.1290.10 1 35 9.7E-4 T 23-04-2016 IPR029032 AhpD-like CLI_RS11005 ddffda431533875f42c6fe1ebd0090c6 423 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 75 416 7.2E-52 T 23-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLI_RS11005 ddffda431533875f42c6fe1ebd0090c6 423 PANTHER PTHR30548:SF2 27 423 2.1E-270 T 23-04-2016 CLI_RS11005 ddffda431533875f42c6fe1ebd0090c6 423 PANTHER PTHR30548 27 423 2.1E-270 T 23-04-2016 CLI_RS03140 36ce3e8fbc9d49585c78d2f945a4ae7f 165 SUPERFAMILY SSF55729 4 147 2.04E-10 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03140 36ce3e8fbc9d49585c78d2f945a4ae7f 165 Gene3D G3DSA:3.40.630.30 4 152 5.5E-12 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05000 866a26769e94102b0559a871b7a40d4c 130 Pfam PF15592 Immunity protein 41 7 118 1.0E-13 T 23-04-2016 IPR028959 Immunity protein 41 CLI_RS12305 821bea1fa3f90b24e38bc568ce899cb0 704 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 256 595 3.0E-20 T 23-04-2016 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 CLI_RS12305 821bea1fa3f90b24e38bc568ce899cb0 704 TIGRFAM TIGR04480 D_pro_red_PrdA: D-proline reductase (dithiol), PrdA proprotein 103 674 2.3E-265 T 23-04-2016 IPR031002 D-proline reductase, PrdA proprotein GO:0050002|GO:0055114 KEGG: 00330+1.21.4.1 CLI_RS06175 9322b9d9225ba90d4d9b569a2b9c5920 247 Pfam PF12730 ABC-2 family transporter protein 5 180 4.9E-12 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 CLI_RS17030 ae0f8b1fac8dc3c733b41918d913564f 320 SUPERFAMILY SSF48317 127 286 4.58E-12 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS17030 ae0f8b1fac8dc3c733b41918d913564f 320 PANTHER PTHR31310:SF7 7 320 4.4E-53 T 23-04-2016 CLI_RS17030 ae0f8b1fac8dc3c733b41918d913564f 320 PANTHER PTHR31310 7 320 4.4E-53 T 23-04-2016 CLI_RS17030 ae0f8b1fac8dc3c733b41918d913564f 320 Gene3D G3DSA:1.20.144.10 212 279 1.6E-8 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS17030 ae0f8b1fac8dc3c733b41918d913564f 320 Pfam PF14378 PAP2 superfamily 125 277 1.6E-12 T 23-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 CLI_RS04265 3d2ba66a19bb7cfb3b9d145300318d6d 482 PANTHER PTHR22935:SF1 19 375 1.5E-75 T 23-04-2016 CLI_RS04265 3d2ba66a19bb7cfb3b9d145300318d6d 482 Pfam PF00144 Beta-lactamase 44 365 4.5E-57 T 23-04-2016 IPR001466 Beta-lactamase-related CLI_RS04265 3d2ba66a19bb7cfb3b9d145300318d6d 482 SUPERFAMILY SSF56601 28 364 4.9E-70 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS04265 3d2ba66a19bb7cfb3b9d145300318d6d 482 Gene3D G3DSA:3.40.710.10 45 365 3.5E-71 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS04265 3d2ba66a19bb7cfb3b9d145300318d6d 482 PANTHER PTHR22935 19 375 1.5E-75 T 23-04-2016 CLI_RS05835 93b96ea833fa56276f57dfc088e77a8e 92 Pfam PF03956 Membrane protein of unknown function (DUF340) 5 82 2.9E-7 T 23-04-2016 IPR005642 Lysine exporter LysO CLI_RS15275 5b106d6c4e097cd25670dfaae42df2aa 122 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 10 122 1.3E-29 T 23-04-2016 IPR023804 Protein of unknown function DUF3792, transmembrane CLI_RS15275 5b106d6c4e097cd25670dfaae42df2aa 122 Pfam PF12670 Protein of unknown function (DUF3792) 9 119 1.9E-24 T 23-04-2016 IPR023804 Protein of unknown function DUF3792, transmembrane CLI_RS13310 24f7a8518f469d691c47ded9d5c753fb 462 Pfam PF02120 Flagellar hook-length control protein FliK 335 414 1.0E-15 T 23-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal CLI_RS02075 46d3e524c449dd494a2254bf28595453 362 PANTHER PTHR30032 1 260 1.6E-32 T 23-04-2016 CLI_RS02075 46d3e524c449dd494a2254bf28595453 362 Pfam PF04122 Putative cell wall binding repeat 2 34 122 1.6E-16 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02075 46d3e524c449dd494a2254bf28595453 362 Pfam PF04122 Putative cell wall binding repeat 2 144 230 1.1E-11 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02075 46d3e524c449dd494a2254bf28595453 362 Pfam PF04122 Putative cell wall binding repeat 2 246 346 2.8E-14 T 23-04-2016 IPR007253 Putative cell wall binding repeat 2 CLI_RS02075 46d3e524c449dd494a2254bf28595453 362 PANTHER PTHR30032:SF1 1 260 1.6E-32 T 23-04-2016 CLI_RS12835 3dd5802e8faf5fe34ac49e5895e61168 342 Pfam PF01594 Domain of unknown function DUF20 13 337 2.4E-64 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CLI_RS12835 3dd5802e8faf5fe34ac49e5895e61168 342 PANTHER PTHR21716 15 340 4.3E-75 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CLI_RS06010 3cd1452a69811594211d494fb06584f1 264 Pfam PF13240 zinc-ribbon domain 2 24 4.2E-9 T 23-04-2016 IPR026870 Zinc-ribbon domain CLI_RS09630 24485110860bba8e544e3cd4bbac1572 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 1.1E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CLI_RS12395 b7e664f1bbd76dd485325fe42557a1aa 702 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 253 593 6.0E-26 T 23-04-2016 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 CLI_RS12395 b7e664f1bbd76dd485325fe42557a1aa 702 TIGRFAM TIGR04480 D_pro_red_PrdA: D-proline reductase (dithiol), PrdA proprotein 96 672 2.2E-266 T 23-04-2016 IPR031002 D-proline reductase, PrdA proprotein GO:0050002|GO:0055114 KEGG: 00330+1.21.4.1 CLI_RS06980 b26221311da05c03820384291ebf1be4 399 SUPERFAMILY SSF103473 1 386 8.11E-54 T 23-04-2016 IPR020846 Major facilitator superfamily domain CLI_RS06980 b26221311da05c03820384291ebf1be4 399 Gene3D G3DSA:1.20.1250.20 213 384 6.3E-22 T 23-04-2016 CLI_RS06980 b26221311da05c03820384291ebf1be4 399 Gene3D G3DSA:1.20.1250.20 5 190 8.0E-27 T 23-04-2016 CLI_RS06980 b26221311da05c03820384291ebf1be4 399 PANTHER PTHR23531 1 398 1.7E-57 T 23-04-2016 CLI_RS06980 b26221311da05c03820384291ebf1be4 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CLI_RS06980 b26221311da05c03820384291ebf1be4 399 Pfam PF07690 Major Facilitator Superfamily 220 386 3.3E-19 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS06980 b26221311da05c03820384291ebf1be4 399 Pfam PF07690 Major Facilitator Superfamily 20 189 6.6E-25 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLI_RS18380 01ffaedef3f34373988ec88f35aad044 189 Pfam PF10646 Sporulation and spore germination 54 163 2.8E-19 T 23-04-2016 IPR019606 GerMN domain CLI_RS18380 01ffaedef3f34373988ec88f35aad044 189 SMART SM00909 81 168 1.2E-24 T 23-04-2016 IPR019606 GerMN domain CLI_RS11380 16472fb99eb084d3ef51c155563ed62a 110 Pfam PF12788 YmaF family 8 102 5.1E-40 T 23-04-2016 IPR024307 YmaF CLI_RS05990 080bd1cf4c2a6a8edca4d2c4de40c79f 399 Gene3D G3DSA:3.90.1200.10 215 241 4.0E-4 T 23-04-2016 CLI_RS16560 7646433a4b117ae45a356b5df71b767e 366 SUPERFAMILY SSF53850 38 262 4.19E-36 T 23-04-2016 CLI_RS16560 7646433a4b117ae45a356b5df71b767e 366 PANTHER PTHR30024 1 318 7.7E-46 T 23-04-2016 CLI_RS16560 7646433a4b117ae45a356b5df71b767e 366 Gene3D G3DSA:3.40.190.10 121 247 1.4E-12 T 23-04-2016 CLI_RS16560 7646433a4b117ae45a356b5df71b767e 366 Pfam PF13379 NMT1-like family 36 263 1.6E-24 T 23-04-2016 CLI_RS16560 7646433a4b117ae45a356b5df71b767e 366 PANTHER PTHR30024:SF1 1 318 7.7E-46 T 23-04-2016 CLI_RS06450 7509d4e9ae178bde395dd8c8fd2b1296 230 Pfam PF12730 ABC-2 family transporter protein 26 186 4.8E-9 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 CLI_RS03985 90505f4e0381133295eb41d7d87bce53 73 Pfam PF07872 Protein of unknown function (DUF1659) 8 51 7.0E-14 T 23-04-2016 IPR012454 Protein of unknown function DUF1659 CLI_RS17940 4a4bb85f04baf7641780760a30596b2f 169 PANTHER PTHR34547 1 167 1.4E-63 T 23-04-2016 CLI_RS17940 4a4bb85f04baf7641780760a30596b2f 169 Pfam PF05991 YacP-like NYN domain 4 167 2.0E-53 T 23-04-2016 IPR010298 Protein of unknown function DUF901 CLI_RS11710 5f379b553d8f08e2a0197fd7e6926a1c 208 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 4 140 9.1E-17 T 23-04-2016 IPR018755 Bacteriophage Mu, Gp48 CLI_RS13390 0e86281dc17ee53246468e2541300835 296 Pfam PF06081 Aromatic acid exporter family member 1 3 144 9.6E-27 T 23-04-2016 IPR010343 Aromatic acid exporter family member 1 CLI_RS13390 0e86281dc17ee53246468e2541300835 296 PANTHER PTHR30509 4 293 2.9E-59 T 23-04-2016 CLI_RS13625 fc4658e30338a0516474fc77fcb585b4 134 Gene3D G3DSA:1.20.58.300 3 120 3.3E-13 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CLI_RS13625 fc4658e30338a0516474fc77fcb585b4 134 Pfam PF05130 FlgN protein 1 133 1.4E-22 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CLI_RS13625 fc4658e30338a0516474fc77fcb585b4 134 SUPERFAMILY SSF140566 3 120 1.03E-16 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CLI_RS13065 0f81c19cd45a6c8732c430dedd1f5fe3 239 Pfam PF09335 SNARE associated Golgi protein 66 182 1.3E-32 T 23-04-2016 IPR032816 SNARE associated Golgi protein CLI_RS13065 0f81c19cd45a6c8732c430dedd1f5fe3 239 PANTHER PTHR12677 2 236 3.1E-48 T 23-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 CLI_RS13065 0f81c19cd45a6c8732c430dedd1f5fe3 239 PANTHER PTHR12677:SF5 2 236 3.1E-48 T 23-04-2016 CLI_RS05330 ed0ffa5e5267291f525ee130793f3d1b 62 Gene3D G3DSA:3.40.50.300 33 61 3.1E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09040 a53a27ed769b49dc9234eae74324bccc 263 Pfam PF14082 Domain of unknown function (DUF4263) 87 247 9.8E-17 T 23-04-2016 IPR025359 Protein of unknown function DUF4263 CLI_RS05335 fdaeba88816b83ea35f77ff823423dd3 166 Pfam PF06695 Putative small multi-drug export protein 32 152 1.5E-43 T 23-04-2016 IPR009577 Putative small multi-drug export CLI_RS05335 fdaeba88816b83ea35f77ff823423dd3 166 PANTHER PTHR36007 16 165 1.4E-37 T 23-04-2016 CLI_RS12605 4785800b547eccf84b08e986c9b39046 112 Gene3D G3DSA:2.60.120.40 8 112 7.0E-23 T 23-04-2016 IPR008983 Tumour necrosis factor-like domain GO:0005515 CLI_RS06180 74e3dbf04d2017c8bc6527ea9dbfcdef 628 PANTHER PTHR23344 111 618 3.5E-148 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 CLI_RS06180 74e3dbf04d2017c8bc6527ea9dbfcdef 628 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 379 597 2.6E-33 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CLI_RS06180 74e3dbf04d2017c8bc6527ea9dbfcdef 628 PANTHER PTHR23344:SF23 111 618 3.5E-148 T 23-04-2016 CLI_RS06180 74e3dbf04d2017c8bc6527ea9dbfcdef 628 Gene3D G3DSA:3.20.20.190 355 609 4.9E-71 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CLI_RS06180 74e3dbf04d2017c8bc6527ea9dbfcdef 628 SUPERFAMILY SSF51695 374 603 1.96E-66 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CLI_RS06180 74e3dbf04d2017c8bc6527ea9dbfcdef 628 Pfam PF10110 Membrane domain of glycerophosphoryl diester phosphodiesterase 19 361 2.1E-82 T 23-04-2016 IPR018476 Glycerophosphoryl diester phosphodiesterase, membrane domain CLI_RS10860 4bf1217ef84db8f87cd8453f86d85e6a 287 TIGRFAM TIGR02580 cas_RAMP_Cmr4: CRISPR type III-B/RAMP module RAMP protein Cmr4 8 275 3.9E-61 T 23-04-2016 IPR013410 CRISPR-associated RAMP Cmr4 CLI_RS10860 4bf1217ef84db8f87cd8453f86d85e6a 287 PANTHER PTHR36700:SF1 1 280 5.4E-70 T 23-04-2016 CLI_RS10860 4bf1217ef84db8f87cd8453f86d85e6a 287 PANTHER PTHR36700 1 280 5.4E-70 T 23-04-2016 CLI_RS10860 4bf1217ef84db8f87cd8453f86d85e6a 287 Pfam PF03787 RAMP superfamily 10 275 1.5E-29 T 23-04-2016 IPR005537 CRISPR type III-associated RAMP protein CLI_RS12545 3a1ac9fee0e26bc5f040adae6e329ffa 227 Pfam PF04298 Putative neutral zinc metallopeptidase 8 221 1.6E-92 T 23-04-2016 IPR007395 Putative neutral zinc metallopeptidase CLI_RS12545 3a1ac9fee0e26bc5f040adae6e329ffa 227 PANTHER PTHR36434 1 227 1.4E-120 T 23-04-2016 CLI_RS04010 a3aa9e24d06404426be7c55364052999 123 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 123 5.5E-48 T 23-04-2016 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 CLI_RS06330 3b4e94d24106d79285c51b089c181c3e 230 Pfam PF04893 Yip1 domain 22 217 4.4E-18 T 23-04-2016 IPR006977 Yip1 domain GO:0016020 CLI_RS09315 ef7c12209713eef6fbb88be5bf9527a5 585 Pfam PF03354 Phage Terminase 88 569 8.5E-67 T 23-04-2016 IPR005021 Phage terminase CLI_RS09315 ef7c12209713eef6fbb88be5bf9527a5 585 PANTHER PTHR41287 33 585 6.8E-84 T 23-04-2016 CLI_RS16080 e0bf86638aeed7b9beb6dd695371847c 180 Pfam PF11417 Loader and inhibitor of phage G40P 2 69 4.5E-22 T 23-04-2016 IPR024424 Replicative helicase inhibitor G39P CLI_RS16080 e0bf86638aeed7b9beb6dd695371847c 180 SUPERFAMILY SSF89064 9 69 2.35E-5 T 23-04-2016 IPR024424 Replicative helicase inhibitor G39P CLI_RS16080 e0bf86638aeed7b9beb6dd695371847c 180 Gene3D G3DSA:1.10.8.200 1 69 1.8E-12 T 23-04-2016 IPR024424 Replicative helicase inhibitor G39P CLI_RS06185 0eb0f97b3f068b25b8b8c29482ed3b49 45 Pfam PF12655 Domain of unknown function (DUF3787) 1 45 4.4E-26 T 23-04-2016 IPR024209 Protein of unknown function DUF3787 CLI_RS02220 73c0a4a8f86892c23081c4f2c67bf521 351 Pfam PF06803 Protein of unknown function (DUF1232) 223 259 1.3E-13 T 23-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 CLI_RS08135 2017f0d53c3e4b906237a1a94ddc6656 243 TIGRFAM TIGR03732 lanti_perm_MutE: lantibiotic protection ABC transporter permease subunit, MutE/EpiE family 3 242 6.9E-97 T 23-04-2016 IPR021205 Lantibiotic ABC transporter permease subunit, SpaE/MutE CLI_RS01900 b40876cb27ebcae3e14ab87a6fa03470 44 TIGRFAM TIGR04223 quorum_AgrD: cyclic lactone autoinducer peptide 8 44 2.2E-12 T 23-04-2016 IPR009229 Staphylococcal AgrD CLI_RS11220 ff5a4db0317e48364be9e2d519b0f70a 134 Pfam PF10990 Protein of unknown function (DUF2809) 32 115 7.3E-31 T 23-04-2016 IPR021257 Protein of unknown function DUF2809 CLI_RS12325 778431602e5d2716a5d8877a3e2edf81 675 SUPERFAMILY SSF58104 404 673 7.85E-70 T 23-04-2016 CLI_RS12325 778431602e5d2716a5d8877a3e2edf81 675 SUPERFAMILY SSF58104 337 371 7.85E-70 T 23-04-2016 CLI_RS12325 778431602e5d2716a5d8877a3e2edf81 675 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 457 646 2.7E-45 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS12325 778431602e5d2716a5d8877a3e2edf81 675 SMART SM00283 398 673 1.5E-69 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLI_RS12325 778431602e5d2716a5d8877a3e2edf81 675 Pfam PF00672 HAMP domain 298 365 5.7E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS12325 778431602e5d2716a5d8877a3e2edf81 675 SMART SM00304 317 369 5.7E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLI_RS12325 778431602e5d2716a5d8877a3e2edf81 675 Pfam PF02743 Cache domain 39 280 1.1E-30 T 23-04-2016 IPR033479 Double Cache domain 1 CLI_RS12325 778431602e5d2716a5d8877a3e2edf81 675 PANTHER PTHR32089:SF46 1 675 0.0 T 23-04-2016 CLI_RS12325 778431602e5d2716a5d8877a3e2edf81 675 Gene3D G3DSA:3.30.450.20 153 294 5.3E-28 T 23-04-2016 CLI_RS12325 778431602e5d2716a5d8877a3e2edf81 675 Gene3D G3DSA:1.10.287.950 413 631 1.1E-51 T 23-04-2016 CLI_RS12325 778431602e5d2716a5d8877a3e2edf81 675 PANTHER PTHR32089 1 675 0.0 T 23-04-2016 CLI_RS13860 ebf8e04b3714bd871848433754e6b29d 358 PANTHER PTHR39177 5 358 1.5E-80 T 23-04-2016 CLI_RS12770 32a2b501db0645f915bf3e442e5de0a0 50 Gene3D G3DSA:1.10.443.10 5 41 8.2E-4 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLI_RS04915 b6b3ff53565f665a365f6424cf75e88b 157 Pfam PF16111 Domain of unknown function (DUF4829) 36 155 5.8E-37 T 23-04-2016 IPR032256 Domain of unknown function DUF4829 CLI_RS15780 169807f75c2248d343398dfe8a85aed4 86 Pfam PF12637 TSCPD domain 4 77 2.6E-32 T 23-04-2016 IPR024434 TSCPD domain CLI_RS15780 169807f75c2248d343398dfe8a85aed4 86 TIGRFAM TIGR03905 TIGR03905_4_Cys: uncharacterized protein TIGR03905 2 79 2.2E-43 T 23-04-2016 IPR023806 Conserved hypothetical protein CHP03905 CLI_RS08345 cb4461e2d740d869a35321706459f7b6 493 Pfam PF13786 Domain of unknown function (DUF4179) 54 142 1.2E-19 T 23-04-2016 IPR025436 Domain of unknown function DUF4179 CLI_RS08345 cb4461e2d740d869a35321706459f7b6 493 Gene3D G3DSA:2.60.40.1630 87 233 1.5E-31 T 23-04-2016 CLI_RS08025 af7dbc297e6aa12eab81ff7385ca4a0d 138 SUPERFAMILY SSF55961 4 131 1.1E-12 T 23-04-2016 CLI_RS02600 ae6ad222c9d68cb89fa07a9d61c5ef18 160 Pfam PF11188 Protein of unknown function (DUF2975) 44 160 1.6E-14 T 23-04-2016 IPR021354 Protein of unknown function DUF2975 CLI_RS03225 07cd546620d192f052b2bc502ff5e1bb 178 Pfam PF11193 Protein of unknown function (DUF2812) 16 114 7.9E-21 T 23-04-2016 IPR021359 Protein of unknown function DUF2812 CLI_RS11780 158aee381c2db22257094f8da212a826 114 Pfam PF05135 Phage gp6-like head-tail connector protein 2 107 3.8E-9 T 23-04-2016 IPR021146 Phage gp6-like head-tail connector protein CLI_RS11770 99fe2bcf90b8e6cd2f33ec2aad841092 163 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 14 116 2.6E-28 T 23-04-2016 IPR010064 Bacteriophage HK97-gp10, putative tail-component CLI_RS14005 6a1bd807a1ab517d749cb0512826b766 308 SUPERFAMILY SSF55166 187 271 4.19E-17 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CLI_RS14005 6a1bd807a1ab517d749cb0512826b766 308 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 198 264 1.7E-17 T 23-04-2016 CLI_RS08140 a7ebdfe979dcd0662af37fbccac7f2a4 247 TIGRFAM TIGR03733 lanti_perm_MutG: lantibiotic protection ABC transporter permease subunit, MutG family 6 244 9.1E-96 T 23-04-2016 IPR022294 Lantibiotic protection ABC transporter permease subunit, MutG family CLI_RS08140 a7ebdfe979dcd0662af37fbccac7f2a4 247 Pfam PF12730 ABC-2 family transporter protein 8 168 3.4E-9 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 CLI_RS01075 8ed5c03ebe65bd24b833dff69e8b9cbc 284 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 31 242 1.7E-79 T 23-04-2016 IPR018708 Protein of unknown function DUF2225 CLI_RS10150 bca4ad31cfd7e3d5042556d510b3577c 354 Pfam PF00860 Permease family 40 332 6.2E-5 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLI_RS07770 4c25b9fa69de8907882a5416f9dfff66 736 Pfam PF02687 FtsX-like permease family 244 364 2.0E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS07770 4c25b9fa69de8907882a5416f9dfff66 736 Pfam PF02687 FtsX-like permease family 610 727 2.3E-10 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CLI_RS18700 773946f57a8ea9943696c3fdf3ff42a6 71 Pfam PF11213 Protein of unknown function (DUF3006) 3 69 3.3E-21 T 23-04-2016 IPR021377 Protein of unknown function DUF3006 CLI_RS04165 c0795b1f2624bd8014a931d2170835a7 331 Pfam PF13170 Protein of unknown function (DUF4003) 15 312 3.8E-106 T 23-04-2016 IPR025062 Protein of unknown function DUF4003 CLI_RS05665 9a06fbbfd5b63ed10b6a86c21813ce93 131 Pfam PF07238 PilZ domain 20 128 1.9E-13 T 23-04-2016 IPR009875 PilZ domain GO:0035438 CLI_RS05665 9a06fbbfd5b63ed10b6a86c21813ce93 131 Gene3D G3DSA:2.40.10.220 47 130 4.8E-8 T 23-04-2016 CLI_RS05665 9a06fbbfd5b63ed10b6a86c21813ce93 131 SUPERFAMILY SSF141371 46 127 5.1E-6 T 23-04-2016 CLI_RS04445 ace571ca384306ab8c6d96a4c68e4802 138 SUPERFAMILY SSF69118 14 134 1.52E-16 T 23-04-2016 IPR029032 AhpD-like CLI_RS04445 ace571ca384306ab8c6d96a4c68e4802 138 Gene3D G3DSA:1.20.1290.10 14 134 3.0E-9 T 23-04-2016 IPR029032 AhpD-like CLI_RS16155 835e2fa8eab5c763c51294aa88deb12c 391 SUPERFAMILY SSF54001 171 366 4.05E-32 T 23-04-2016 CLI_RS16155 835e2fa8eab5c763c51294aa88deb12c 391 SMART SM00460 304 366 2.3E-19 T 23-04-2016 IPR002931 Transglutaminase-like CLI_RS16155 835e2fa8eab5c763c51294aa88deb12c 391 Pfam PF01841 Transglutaminase-like superfamily 253 364 2.0E-21 T 23-04-2016 IPR002931 Transglutaminase-like CLI_RS15810 26c08fe933d718294ee544a4ffd8e104 371 TIGRFAM TIGR04066 nat_prod_clost: peptide maturation system protein, TIGR04066 family 5 364 1.4E-143 T 23-04-2016 IPR023823 Conserved hypothetical protein CHP04066, peptide maturation system CLI_RS11525 faadc39e57ecff1d6e28618cefa81b8a 457 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 67 223 1.8E-10 T 23-04-2016 CLI_RS02980 617394df1c553a0fcebf25099e8a2b6f 229 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 125 203 1.9E-7 T 23-04-2016 IPR024425 Cell wall-active antibiotics response 4TMS YvqF CLI_RS05940 7e0d3482255e8488a0b0794d85322eec 66 Pfam PF14056 Domain of unknown function (DUF4250) 11 63 7.8E-23 T 23-04-2016 IPR025346 Protein of unknown function DUF4250 CLI_RS09565 c6e09695621ee313917a1ad7b98c28ec 387 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 1 381 2.3E-148 T 23-04-2016 IPR014194 Sporulation stage III, protein AE CLI_RS09565 c6e09695621ee313917a1ad7b98c28ec 387 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 59 381 3.4E-114 T 23-04-2016 IPR014194 Sporulation stage III, protein AE CLI_RS00030 a349eaea7f1b5da1063596b251762734 87 Pfam PF04025 Domain of unknown function (DUF370) 2 79 2.0E-8 T 23-04-2016 IPR007169 Uncharacterised protein family UPF0296 CLI_RS07360 4bfc43811e693ab8e5a31aefb540bf57 182 Pfam PF04463 Protein of unknown function (DUF523) 8 126 1.5E-7 T 23-04-2016 IPR007553 Domain of unknown function DUF523 CLI_RS02170 0e9a080ed01f388edea0c53c92a80bfe 276 TIGRFAM TIGR04398 SLAP_DUP: SLAP domain 16 139 7.4E-37 T 23-04-2016 IPR030910 SLAP domain, Bacillus-type CLI_RS02170 0e9a080ed01f388edea0c53c92a80bfe 276 TIGRFAM TIGR04398 SLAP_DUP: SLAP domain 151 274 3.2E-38 T 23-04-2016 IPR030910 SLAP domain, Bacillus-type CLI_RS16550 a823903579322eb2efdf2b3c1396b4df 46 Pfam PF03243 Alkylmercury lyase 1 40 1.5E-4 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CLI_RS15435 525c67ede7df7653d0d336c82c7392bd 410 Pfam PF04932 O-Antigen ligase 204 338 4.1E-17 T 23-04-2016 IPR007016 O-antigen ligase-related CLI_RS13800 1c51e7461a881ee8a5e4190c441dff96 78 Pfam PF02344 Myc leucine zipper domain 50 75 3.6E-5 T 23-04-2016 IPR003327 Leucine zipper, Myc GO:0003700|GO:0005634|GO:0006355 CLI_RS02725 67a85a05090227928254a5dc8c72e8a8 87 Pfam PF13031 Protein of unknown function (DUF3892) 12 79 1.3E-11 T 23-04-2016 IPR024997 Protein of unknown function DUF3892 CLI_RS15700 cd0f584133d51af73fb6a7560ab0461c 90 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 28 67 1.2E-9 T 23-04-2016 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLI_RS08290 883560d76087596b0d77f11e9aa8d79c 66 Pfam PF04284 Protein of unknown function (DUF441) 5 42 3.7E-7 T 23-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame CLI_RS17290 54168e69ead1c70fe979537c9e2a7f73 117 Pfam PF07561 Domain of Unknown Function (DUF1540) 6 38 1.9E-5 T 23-04-2016 IPR011437 Domain of unknown function DUF1540 CLI_RS17290 54168e69ead1c70fe979537c9e2a7f73 117 Pfam PF07561 Domain of Unknown Function (DUF1540) 73 113 7.4E-10 T 23-04-2016 IPR011437 Domain of unknown function DUF1540 CLI_RS05955 a3a8e7e0112ccaa7d846fa11aa7e8827 193 Pfam PF12983 Protein of unknown function (DUF3867) 3 193 1.1E-77 T 23-04-2016 IPR024218 Protein of unknown function DUF3867 CLI_RS09255 90910f204fd4cb62c1dc85e43c5e7e4f 1166 Pfam PF10145 Phage-related minor tail protein 259 451 6.8E-33 T 23-04-2016 IPR010090 Phage tail tape measure protein CLI_RS09255 90910f204fd4cb62c1dc85e43c5e7e4f 1166 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 218 557 6.8E-41 T 23-04-2016 IPR010090 Phage tail tape measure protein CLI_RS14395 d97f9451a2e6c60fed4b921376f76d14 245 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 14 237 1.0E-47 T 23-04-2016 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC CLI_RS05490 1ca4f16f7599da757205136c2380a48e 228 Pfam PF08713 DNA alkylation repair enzyme 6 207 1.7E-13 T 23-04-2016 IPR014825 DNA alkylation repair enzyme CLI_RS05490 1ca4f16f7599da757205136c2380a48e 228 SUPERFAMILY SSF48371 9 208 6.56E-41 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 CLI_RS07045 405244613c47ebbf73e34036a2de5d95 623 Pfam PF14342 Domain of unknown function (DUF4396) 466 619 9.2E-30 T 23-04-2016 IPR025509 Domain of unknown function DUF4396 CLI_RS05385 364f752a9811b35457f03364b8756d8c 148 Pfam PF12675 Protein of unknown function (DUF3795) 11 113 9.3E-17 T 23-04-2016 IPR024227 Protein of unknown function DUF3795 CLI_RS14060 f95e54803eb440b8dcdf5135a8c58ef5 132 Pfam PF16760 Starch/carbohydrate-binding module (family 53) 41 126 3.2E-16 T 23-04-2016 IPR005085 Carbohydrate binding module family 25 GO:2001070 CLI_RS14060 f95e54803eb440b8dcdf5135a8c58ef5 132 SMART SM01066 38 127 1.0E-32 T 23-04-2016 IPR005085 Carbohydrate binding module family 25 GO:2001070 CLI_RS14515 031816d2ba33793870adb9f7127a18b7 229 Pfam PF13346 ABC-2 family transporter protein 7 220 1.8E-18 T 23-04-2016 IPR025699 ABC-2 membrane transporter-like CLI_RS11880 e042c13157ac7122ceefe0afd40c0af6 59 Pfam PF12677 Domain of unknown function (DUF3797) 4 48 2.6E-19 T 23-04-2016 IPR024256 Domain of unknown function DUF3797 CLI_RS06485 0cd58602c2b72a5c07a05ccc22a74325 85 Pfam PF12728 Helix-turn-helix domain 1 50 6.5E-7 T 23-04-2016 CLI_RS06485 0cd58602c2b72a5c07a05ccc22a74325 85 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 2 47 1.7E-7 T 23-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 CLI_RS06615 bfea3d9f96863d956b2774b017f52940 121 Pfam PF14276 Domain of unknown function (DUF4363) 13 112 2.6E-9 T 23-04-2016 IPR025373 Protein of unknown function DUF4363 CLI_RS09205 fa1d51fb0fa5195ab6bbe8fc137d440d 84 Pfam PF10779 Haemolysin XhlA 13 78 2.0E-22 T 23-04-2016 IPR019715 Haemolysin XhlA CLI_RS12755 929895b459bccc708a8c412f057a88be 267 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 19 255 4.6E-85 T 23-04-2016 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain CLI_RS15080 9ebcccd683f3ff5232186f967dac2b93 361 SUPERFAMILY SSF69279 31 186 2.15E-8 T 23-04-2016 CLI_RS15940 dc23e373e64beecac0615d376bed1d33 193 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 2 183 6.1E-38 T 23-04-2016 IPR006490 Phage major tail protein, phi13 family CLI_RS02655 948c66386ed819d9cb66132c37a81c49 57 TIGRFAM TIGR03602 streptolysinS: bacteriocin protoxin, streptolysin S family 1 56 2.6E-33 T 23-04-2016 IPR019891 Bacteriocin, streptolysin S, precursor CLI_RS00320 593ab37d830328558b2d9251cbd9ba4c 93 Pfam PF04918 DltD central region 1 82 1.6E-8 T 23-04-2016 IPR007002 DltD, central domain UniPathway: UPA00556 CLI_RS04060 5ea272bce1ecefc10309434dc3f6a10a 750 Pfam PF06597 Clostridium P-47 protein 173 566 7.8E-38 T 23-04-2016 IPR010567 Clostridium P47 protein CLI_RS11750 e0e83c023a9fd50003d058c3e69c4ad8 137 Pfam PF08890 Phage XkdN-like tail assembly chaperone protein, TAC 5 136 4.5E-36 T 23-04-2016 IPR014986 Clostridium phage phiCD119, XkdN CLI_RS06850 95e50456389440ec1535f121dc221ed3 124 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 18 118 4.1E-17 T 23-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV CLI_RS16575 4c0d538bc673e8442ed2a7d37491c8a5 86 Gene3D G3DSA:3.40.30.10 3 82 1.1E-4 T 23-04-2016 IPR012336 Thioredoxin-like fold CLI_RS01365 8f1bc4413fd389c3b9de7cb2461673d9 80 Gene3D G3DSA:2.60.120.10 23 75 1.3E-6 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CLI_RS01365 8f1bc4413fd389c3b9de7cb2461673d9 80 SUPERFAMILY SSF51206 23 75 7.86E-6 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CLI_RS13010 70c750c45ae5eb0a639e088ef8c4f261 158 Pfam PF16224 DOmain of unknown function (DUF4883) 34 152 6.6E-46 T 23-04-2016 IPR032619 Protein of unknown function DUF4883 CLI_RS16320 765c4ba8c4d5fd7f66b308a5b04c6629 50 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 12 44 1.6E-4 T 23-04-2016 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLI_RS01125 e77950ff69003b5a0f675bd6d93ec0a5 345 Pfam PF04245 37-kD nucleoid-associated bacterial protein 13 343 9.4E-74 T 23-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CLI_RS11425 7d77702d9eeebac30e4af7d73e197912 244 Pfam PF12730 ABC-2 family transporter protein 5 172 2.1E-8 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 CLI_RS03115 e7e114abb979ab9dfe6eb812cd9169c8 41 TIGRFAM TIGR04333 Clo7Bot_mod_Cys: Cys-rich peptide, Clo7bot family 1 33 1.3E-16 T 23-04-2016 IPR027601 Cys-rich peptide, Clo7bot family CLI_RS15925 f54b85b9f0a5ad757514cb767e085bb5 289 Pfam PF05709 Phage tail protein 35 287 4.8E-42 T 23-04-2016 IPR008841 Siphovirus-type tail component CLI_RS13795 c65ffd132b971657153503c852d8c47d 116 SUPERFAMILY SSF54913 4 113 6.04E-6 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLI_RS10725 cb80fe23fde307df54d3bf3eb932cb0a 163 Pfam PF11188 Protein of unknown function (DUF2975) 37 162 7.7E-23 T 23-04-2016 IPR021354 Protein of unknown function DUF2975 CLI_RS06395 a29292859d229fe8ad3e02aacd6df183 130 Gene3D G3DSA:2.60.300.12 3 85 1.1E-4 T 23-04-2016 IPR000361 FeS cluster biogenesis CLI_RS05155 4f7f57ba1277cdab67248fb626706a36 66 Pfam PF12663 Protein of unknown function (DUF3788) 3 58 1.1E-11 T 23-04-2016 IPR024265 Protein of unknown function DUF3788 CLI_RS11970 10c50016f38245d12b368e7bf737ccf4 427 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 74 223 3.2E-6 T 23-04-2016 CLI_RS06540 d18514f0552dc6831ad71ab8952b7b06 43 Pfam PF04723 Glycine reductase complex selenoprotein A 4 43 7.4E-19 T 23-04-2016 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 CLI_RS02950 99ed8c933b13b33d99f47e2cb44f69ab 70 Pfam PF04324 BFD-like [2Fe-2S] binding domain 16 67 1.8E-13 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain CLI_RS07505 3336a60c456ea4e5a5bcfc32914f21d2 167 Pfam PF04999 Cell division protein FtsL 53 128 1.1E-6 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CLI_RS04380 2925a96a196a8a59fc50e9e7a1ca5605 83 Pfam PF13684 Dihydroxyacetone kinase family 3 79 4.4E-20 T 23-04-2016 IPR033470 Uncharacterised protein, DhaK domain CLI_RS00395 eebfe9bcf10d5ca889039f10733804bb 70 Pfam PF10764 Inhibitor of sigma-G Gin 6 50 1.8E-16 T 23-04-2016 IPR019700 Anti-sigma-G factor Gin