BJL90_RS00055	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00060	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00080	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00085	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00115	SM00829	Enoylreductase
BJL90_RS00120	SM00354	helix_turn _helix lactose operon repressor
BJL90_RS00150	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00160	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS00195	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00210	SM00100	Cyclic nucleotide-monophosphate binding domain
BJL90_RS00245	SM00831	Cation transporter/ATPase, N-terminus
BJL90_RS00265	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS00285	SM00829	Enoylreductase
BJL90_RS00305	SM00354	helix_turn _helix lactose operon repressor
BJL90_RS00325	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJL90_RS00330	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00335	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00355	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00365	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BJL90_RS00365	SM00534	ATPase domain of DNA mismatch repair MUTS family
BJL90_RS00445	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00510	SM01018	B12 binding domain
BJL90_RS00555	SM00491	BJL90_RS00555
BJL90_RS00570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS00615	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00620	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00640	SM00877	BJL90_RS00640
BJL90_RS00655	SM00877	BJL90_RS00655
BJL90_RS00665	SM00877	BJL90_RS00665
BJL90_RS00680	SM00877	BJL90_RS00680
BJL90_RS00700	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS00715	SM00877	BJL90_RS00715
BJL90_RS00720	SM00877	BJL90_RS00720
BJL90_RS00745	SM00387	Histidine kinase-like ATPases
BJL90_RS00750	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS00750	SM00448	cheY-homologous receiver domain
BJL90_RS00770	SM00257	Lysin motif
BJL90_RS00785	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BJL90_RS00790	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BJL90_RS00830	SM00861	Transketolase, pyrimidine binding domain
BJL90_RS00845	SM01120	BJL90_RS00845
BJL90_RS00860	SM00829	Enoylreductase
BJL90_RS00870	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS00870	SM00448	cheY-homologous receiver domain
BJL90_RS00875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS00875	SM00387	Histidine kinase-like ATPases
BJL90_RS00915	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS00915	SM00871	Bacterial transcription activator, effector binding domain
BJL90_RS00965	SM00448	cheY-homologous receiver domain
BJL90_RS00965	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS00975	SM01321	BJL90_RS00975
BJL90_RS00995	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS01015	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS01060	SM01321	BJL90_RS01060
BJL90_RS01105	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS01120	SM00857	Resolvase, N terminal domain
BJL90_RS01175	SM00267	diguanylate cyclase
BJL90_RS01235	SM00507	HNH nucleases
BJL90_RS01245	SM00487	DEAD-like helicases superfamily
BJL90_RS01290	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS01300	SM00990	BJL90_RS01300
BJL90_RS01315	SM00400	zinc finger
BJL90_RS01340	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS01345	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS01360	SM00857	Resolvase, N terminal domain
BJL90_RS01415	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS01460	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BJL90_RS01460	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BJL90_RS01460	SM00493	BJL90_RS01460
BJL90_RS01540	SM00909	Sporulation and spore germination
BJL90_RS01590	SM00481	DNA polymerase alpha chain like domain
BJL90_RS01610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS01610	SM00866	BJL90_RS01610
BJL90_RS01615	SM01018	B12 binding domain
BJL90_RS01620	SM01018	B12 binding domain
BJL90_RS01645	SM01018	B12 binding domain
BJL90_RS01655	SM01018	B12 binding domain
BJL90_RS01665	SM00028	Tetratricopeptide repeats
BJL90_RS01665	SM01043	Bacterial transcriptional activator domain
BJL90_RS01680	SM01221	BJL90_RS01680
BJL90_RS01680	SM01222	BJL90_RS01680
BJL90_RS01690	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS01735	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS01755	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BJL90_RS01755	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BJL90_RS01760	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BJL90_RS01775	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BJL90_RS01780	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BJL90_RS01800	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BJL90_RS01800	SM00465	GIY-YIG type nucleases (URI domain)
BJL90_RS01810	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS01815	SM00487	DEAD-like helicases superfamily
BJL90_RS01815	SM00490	helicase superfamily c-terminal domain
BJL90_RS01820	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BJL90_RS01820	SM00245	tail specific protease
BJL90_RS01835	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS01845	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS01845	SM00448	cheY-homologous receiver domain
BJL90_RS01850	SM00387	Histidine kinase-like ATPases
BJL90_RS01850	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS01910	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS01915	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS01940	SM00257	Lysin motif
BJL90_RS01945	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJL90_RS01945	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS01970	SM00861	Transketolase, pyrimidine binding domain
BJL90_RS02020	SM01005	Alanine racemase, C-terminal domain
BJL90_RS02105	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJL90_RS02135	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS02165	SM00851	MGS-like domain
BJL90_RS02165	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BJL90_RS02165	SM01209	BJL90_RS02165
BJL90_RS02170	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BJL90_RS02175	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BJL90_RS02190	SM01329	BJL90_RS02190
BJL90_RS02230	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS02235	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS02255	SM00138	Methyltransferase, chemotaxis proteins 
BJL90_RS02260	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJL90_RS02260	SM00387	Histidine kinase-like ATPases
BJL90_RS02260	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS02260	SM00448	cheY-homologous receiver domain
BJL90_RS02265	SM00387	Histidine kinase-like ATPases
BJL90_RS02265	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS02265	SM00448	cheY-homologous receiver domain
BJL90_RS02280	SM00448	cheY-homologous receiver domain
BJL90_RS02305	SM00642	Alpha-amylase domain
BJL90_RS02330	SM00642	Alpha-amylase domain
BJL90_RS02390	SM00478	endonuclease III
BJL90_RS02390	SM00525	BJL90_RS02390
BJL90_RS02395	SM00986	Uracil DNA glycosylase superfamily
BJL90_RS02395	SM00987	UreE urease accessory protein, C-terminal domain 
BJL90_RS02435	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS02470	SM00419	helix_turn_helix, cAMP Regulatory protein
BJL90_RS02480	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS02485	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS02490	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS02515	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJL90_RS02520	SM00387	Histidine kinase-like ATPases
BJL90_RS02525	SM00448	cheY-homologous receiver domain
BJL90_RS02545	SM00764	Citrate lyase ligase C-terminal domain
BJL90_RS02595	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS02605	SM01018	B12 binding domain
BJL90_RS02625	SM01018	B12 binding domain
BJL90_RS02630	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS02635	SM00448	cheY-homologous receiver domain
BJL90_RS02640	SM00091	PAS domain
BJL90_RS02640	SM00387	Histidine kinase-like ATPases
BJL90_RS02640	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS02640	SM00448	cheY-homologous receiver domain
BJL90_RS02645	SM00448	cheY-homologous receiver domain
BJL90_RS02650	SM00138	Methyltransferase, chemotaxis proteins 
BJL90_RS02655	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS02655	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS02660	SM00260	Two component signalling adaptor domain
BJL90_RS02665	SM00073	Histidine Phosphotransfer domain
BJL90_RS02665	SM00260	Two component signalling adaptor domain
BJL90_RS02665	SM00387	Histidine kinase-like ATPases
BJL90_RS02665	SM01231	BJL90_RS02665
BJL90_RS02695	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS02695	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS02715	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS02745	SM00346	helix_turn_helix isocitrate lyase regulation
BJL90_RS02780	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BJL90_RS02785	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJL90_RS02785	SM00267	diguanylate cyclase
BJL90_RS02795	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS02805	SM00387	Histidine kinase-like ATPases
BJL90_RS02810	SM00448	cheY-homologous receiver domain
BJL90_RS02810	SM00850	LytTr DNA-binding domain
BJL90_RS02825	SM01266	BJL90_RS02825
BJL90_RS02830	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS03015	SM00091	PAS domain
BJL90_RS03015	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS03470	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BJL90_RS03480	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS03485	SM00257	Lysin motif
BJL90_RS03500	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BJL90_RS03525	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BJL90_RS03535	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS03550	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJL90_RS03570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS03570	SM00387	Histidine kinase-like ATPases
BJL90_RS03570	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS03590	SM00257	Lysin motif
BJL90_RS03595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS03595	SM00387	Histidine kinase-like ATPases
BJL90_RS03595	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS03625	SM00646	BJL90_RS03625
BJL90_RS03660	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS03665	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS03675	SM00662	RNA polymerases D
BJL90_RS03680	SM00363	S4 RNA-binding domain
BJL90_RS03680	SM01390	BJL90_RS03680
BJL90_RS03700	SM00316	Ribosomal protein S1-like RNA-binding domain
BJL90_RS03765	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BJL90_RS03770	SM01374	BJL90_RS03770
BJL90_RS03790	SM00322	K homology RNA-binding domain
BJL90_RS03805	SM01382	BJL90_RS03805
BJL90_RS03805	SM01383	BJL90_RS03805
BJL90_RS03825	SM01403	BJL90_RS03825
BJL90_RS03835	SM00838	Elongation factor G C-terminus
BJL90_RS03835	SM00889	Elongation factor G, domain IV
BJL90_RS03855	SM00663	RNA polymerase I subunit A N-terminus
BJL90_RS03880	SM00649	Ribosomal protein L11/L12
BJL90_RS03885	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BJL90_RS03885	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BJL90_RS03915	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BJL90_RS03930	SM00535	Ribonuclease III family
BJL90_RS03935	SM00840	BJL90_RS03935
BJL90_RS03955	SM00946	Prolyl-tRNA synthetase, C-terminal
BJL90_RS03970	SM00670	Large family of predicted nucleotide-binding domains
BJL90_RS03975	SM01058	CarD-like/TRCF domain
BJL90_RS03990	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS03995	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS03995	SM01086	C-terminal, D2-small domain, of ClpB protein
BJL90_RS04015	SM00838	Elongation factor G C-terminus
BJL90_RS04015	SM00889	Elongation factor G, domain IV
BJL90_RS04035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS04045	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS04130	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS04135	SM00977	TilS substrate C-terminal domain
BJL90_RS04140	SM00220	Serine/Threonine protein kinases, catalytic domain
BJL90_RS04155	SM00981	BJL90_RS04155
BJL90_RS04165	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS04170	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS04200	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS04250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS04250	SM00895	BJL90_RS04250
BJL90_RS04260	SM00257	Lysin motif
BJL90_RS04280	SM00646	BJL90_RS04280
BJL90_RS04285	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJL90_RS04300	SM00900	BJL90_RS04300
BJL90_RS04310	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS04330	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS04330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS04335	SM01131	BJL90_RS04335
BJL90_RS04360	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS04405	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS04405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS04430	SM00091	PAS domain
BJL90_RS04430	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS04440	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS04450	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
BJL90_RS04455	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BJL90_RS04465	SM00893	Electron transfer flavoprotein domain
BJL90_RS04470	SM00893	Electron transfer flavoprotein domain
BJL90_RS04490	SM00890	Domain of unknown function
BJL90_RS04495	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS04495	SM00895	BJL90_RS04495
BJL90_RS04520	SM00155	Phospholipase D. Active site motifs.
BJL90_RS04530	SM00890	Domain of unknown function
BJL90_RS04595	SM00876	Biotin and Thiamin Synthesis associated domain
BJL90_RS04625	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS04625	SM01086	C-terminal, D2-small domain, of ClpB protein
BJL90_RS04655	SM00858	BJL90_RS04655
BJL90_RS04660	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS04665	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS04690	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS04740	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
BJL90_RS04770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS04770	SM00895	BJL90_RS04770
BJL90_RS04785	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS04830	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BJL90_RS04835	SM00363	S4 RNA-binding domain
BJL90_RS04915	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS04930	SM00422	helix_turn_helix, mercury resistance
BJL90_RS04945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS04945	SM00895	BJL90_RS04945
BJL90_RS05010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS05020	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS05070	SM00014	Acid phosphatase homologues
BJL90_RS05080	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BJL90_RS05085	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS05110	SM00091	PAS domain
BJL90_RS05110	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS05110	SM00387	Histidine kinase-like ATPases
BJL90_RS05110	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS05115	SM00448	cheY-homologous receiver domain
BJL90_RS05115	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS05130	SM00257	Lysin motif
BJL90_RS05130	SM01208	BJL90_RS05130
BJL90_RS05145	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS05150	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS05155	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS05160	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS05170	SM00448	cheY-homologous receiver domain
BJL90_RS05170	SM00850	LytTr DNA-binding domain
BJL90_RS05180	SM00387	Histidine kinase-like ATPases
BJL90_RS05200	SM00788	Adenylosuccinate synthetase
BJL90_RS05260	SM00052	Putative diguanylate phosphodiesterase
BJL90_RS05260	SM00091	PAS domain
BJL90_RS05260	SM00267	diguanylate cyclase
BJL90_RS05420	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS05450	SM00493	BJL90_RS05450
BJL90_RS05460	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS05500	SM00470	ParB-like nuclease domain
BJL90_RS05515	SM00470	ParB-like nuclease domain
BJL90_RS05525	SM01228	BJL90_RS05525
BJL90_RS05535	SM00393	Putative single-stranded nucleic acids-binding domain
BJL90_RS05535	SM01245	BJL90_RS05535
BJL90_RS05545	SM01234	BJL90_RS05545
BJL90_RS05560	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS05560	SM00760	Bacterial dnaA protein helix-turn-helix domain
BJL90_RS05565	SM00480	DNA polymerase III beta subunit
BJL90_RS05585	SM00387	Histidine kinase-like ATPases
BJL90_RS05585	SM00433	TopoisomeraseII
BJL90_RS05590	SM00434	DNA Topoisomerase IV
BJL90_RS05835	SM01004	Delta-aminolevulinic acid dehydratase
BJL90_RS05960	SM00966	SpoVT / AbrB like domain 
BJL90_RS05965	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS06000	SM01208	BJL90_RS06000
BJL90_RS06005	SM00493	BJL90_RS06005
BJL90_RS06010	SM00650	Ribosomal RNA adenine dimethylases
BJL90_RS06025	SM00450	Rhodanese Homology Domain
BJL90_RS06095	SM01400	BJL90_RS06095
BJL90_RS06110	SM00487	DEAD-like helicases superfamily
BJL90_RS06110	SM00490	helicase superfamily c-terminal domain
BJL90_RS06110	SM00982	BJL90_RS06110
BJL90_RS06110	SM01058	CarD-like/TRCF domain
BJL90_RS06120	SM00966	SpoVT / AbrB like domain 
BJL90_RS06135	SM00411	bacterial (prokaryotic) histone like domain
BJL90_RS06140	SM00363	S4 RNA-binding domain
BJL90_RS06165	SM00316	Ribosomal protein S1-like RNA-binding domain
BJL90_RS06175	SM00331	Sigma factor PP2C-like phosphatases
BJL90_RS06185	SM00060	Fibronectin type 3 domain
BJL90_RS06185	SM00429	ig-like, plexins, transcription factors
BJL90_RS06260	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS06285	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BJL90_RS06430	SM00357	Cold shock protein domain
BJL90_RS06430	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS06430	SM00959	Rho termination factor, N-terminal domain
BJL90_RS06460	SM00937	BJL90_RS06460
BJL90_RS06470	SM00240	Forkhead associated domain
BJL90_RS06490	SM00226	Low molecular weight phosphatase family
BJL90_RS06565	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS06675	SM00984	UDP binding domain
BJL90_RS06715	SM00984	UDP binding domain
BJL90_RS06740	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS06770	SM00518	AP endonuclease family 2
BJL90_RS06785	SM00346	helix_turn_helix isocitrate lyase regulation
BJL90_RS06805	SM00060	Fibronectin type 3 domain
BJL90_RS06820	SM00448	cheY-homologous receiver domain
BJL90_RS06820	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS06825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS06825	SM00387	Histidine kinase-like ATPases
BJL90_RS06825	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS06830	SM00909	Sporulation and spore germination
BJL90_RS06860	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BJL90_RS06860	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS06945	SM00822	BJL90_RS06945
BJL90_RS06975	SM00858	BJL90_RS06975
BJL90_RS07025	SM00858	BJL90_RS07025
BJL90_RS07125	SM00387	Histidine kinase-like ATPases
BJL90_RS07130	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS07130	SM00448	cheY-homologous receiver domain
BJL90_RS07155	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS07160	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS07210	SM00957	SecA DEAD-like domain
BJL90_RS07210	SM00958	SecA preprotein cross-linking domain
BJL90_RS07215	SM00937	BJL90_RS07215
BJL90_RS07250	SM00316	Ribosomal protein S1-like RNA-binding domain
BJL90_RS07250	SM00732	Likely ribonuclease with RNase H fold.
BJL90_RS07255	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJL90_RS07255	SM00387	Histidine kinase-like ATPases
BJL90_RS07260	SM00448	cheY-homologous receiver domain
BJL90_RS07260	SM01012	BJL90_RS07260
BJL90_RS07270	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS07280	SM00829	Enoylreductase
BJL90_RS07290	SM01007	Class II Aldolase and Adducin N-terminal domain
BJL90_RS07325	SM00387	Histidine kinase-like ATPases
BJL90_RS07330	SM00448	cheY-homologous receiver domain
BJL90_RS07330	SM00850	LytTr DNA-binding domain
BJL90_RS07385	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS07395	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS07400	SM00881	CoA binding domain
BJL90_RS07405	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJL90_RS07420	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BJL90_RS07445	SM00478	endonuclease III
BJL90_RS07455	SM00883	Chaperonin 10 Kd subunit
BJL90_RS07485	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJL90_RS07485	SM01240	BJL90_RS07485
BJL90_RS07525	SM00365	Leucine-rich repeat, SDS22-like subfamily
BJL90_RS07525	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BJL90_RS07540	SM01001	AIR carboxylase
BJL90_RS07565	SM00798	AICARFT/IMPCHase bienzyme
BJL90_RS07565	SM00851	MGS-like domain
BJL90_RS07570	SM01209	BJL90_RS07570
BJL90_RS07570	SM01210	BJL90_RS07570
BJL90_RS07575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS07595	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS07610	SM00893	Electron transfer flavoprotein domain
BJL90_RS07615	SM00893	Electron transfer flavoprotein domain
BJL90_RS07640	SM00481	DNA polymerase alpha chain like domain
BJL90_RS07650	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BJL90_RS07655	SM00902	Iron hydrogenase small subunit
BJL90_RS07655	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BJL90_RS07660	SM00448	cheY-homologous receiver domain
BJL90_RS07660	SM01012	BJL90_RS07660
BJL90_RS07665	SM00387	Histidine kinase-like ATPases
BJL90_RS07685	SM00877	BJL90_RS07685
BJL90_RS07690	SM00877	BJL90_RS07690
BJL90_RS07700	SM00877	BJL90_RS07700
BJL90_RS07730	SM00877	BJL90_RS07730
BJL90_RS07740	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS07830	SM00830	Chorismate mutase type II
BJL90_RS07835	SM00091	PAS domain
BJL90_RS07835	SM00387	Histidine kinase-like ATPases
BJL90_RS07835	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS07840	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS07840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS07850	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BJL90_RS07850	SM00292	breast cancer carboxy-terminal domain
BJL90_RS07850	SM00532	Ligase N family
BJL90_RS07865	SM00899	BJL90_RS07865
BJL90_RS07895	SM00646	BJL90_RS07895
BJL90_RS07905	SM00909	Sporulation and spore germination
BJL90_RS07970	SM01117	BJL90_RS07970
BJL90_RS08050	SM00062	Bacterial periplasmic substrate-binding proteins
BJL90_RS08060	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08070	SM00829	Enoylreductase
BJL90_RS08080	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS08085	SM00091	PAS domain
BJL90_RS08085	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08100	SM00861	Transketolase, pyrimidine binding domain
BJL90_RS08120	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJL90_RS08120	SM00091	PAS domain
BJL90_RS08125	SM00091	PAS domain
BJL90_RS08125	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08160	SM00564	beta-propeller repeat
BJL90_RS08210	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08225	SM00327	von Willebrand factor (vWF) type A domain
BJL90_RS08255	SM01068	Putative carbohydrate binding domain
BJL90_RS08270	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS08280	SM00636	BJL90_RS08280
BJL90_RS08290	SM00052	Putative diguanylate phosphodiesterase
BJL90_RS08290	SM00267	diguanylate cyclase
BJL90_RS08310	SM00646	BJL90_RS08310
BJL90_RS08340	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08370	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS08370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS08375	SM01329	BJL90_RS08375
BJL90_RS08390	SM00260	Two component signalling adaptor domain
BJL90_RS08415	SM01001	AIR carboxylase
BJL90_RS08435	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08435	SM00930	BJL90_RS08435
BJL90_RS08520	SM00878	Biotin carboxylase C-terminal domain
BJL90_RS08525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS08525	SM00387	Histidine kinase-like ATPases
BJL90_RS08525	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS08530	SM00354	helix_turn _helix lactose operon repressor
BJL90_RS08545	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08545	SM00994	ClpX C4-type zinc finger
BJL90_RS08545	SM01086	C-terminal, D2-small domain, of ClpB protein
BJL90_RS08560	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08565	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08565	SM00464	Found in ATP-dependent protease La (LON)
BJL90_RS08610	SM00028	Tetratricopeptide repeats
BJL90_RS08615	SM00448	cheY-homologous receiver domain
BJL90_RS08615	SM00850	LytTr DNA-binding domain
BJL90_RS08630	SM00793	Accessory gene regulator B
BJL90_RS08640	SM00387	Histidine kinase-like ATPases
BJL90_RS08640	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS08650	SM00155	Phospholipase D. Active site motifs.
BJL90_RS08675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS08690	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BJL90_RS08710	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08740	SM00100	Cyclic nucleotide-monophosphate binding domain
BJL90_RS08740	SM00419	helix_turn_helix, cAMP Regulatory protein
BJL90_RS08755	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BJL90_RS08800	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08815	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS08875	SM00448	cheY-homologous receiver domain
BJL90_RS08875	SM00850	LytTr DNA-binding domain
BJL90_RS08895	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS08930	SM00612	BJL90_RS08930
BJL90_RS08980	SM00857	Resolvase, N terminal domain
BJL90_RS09005	SM01321	BJL90_RS09005
BJL90_RS09085	SM00852	Probable molybdopterin binding domain
BJL90_RS09160	SM00060	Fibronectin type 3 domain
BJL90_RS09165	SM00900	BJL90_RS09165
BJL90_RS09180	SM01018	B12 binding domain
BJL90_RS09185	SM00091	PAS domain
BJL90_RS09185	SM00387	Histidine kinase-like ATPases
BJL90_RS09185	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS09195	SM00938	Nitrogen regulatory protein P-II
BJL90_RS09200	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS09200	SM01027	Beta-Casp domain
BJL90_RS09210	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS09215	SM00331	Sigma factor PP2C-like phosphatases
BJL90_RS09215	SM00448	cheY-homologous receiver domain
BJL90_RS09225	SM00346	helix_turn_helix isocitrate lyase regulation
BJL90_RS09255	SM00858	BJL90_RS09255
BJL90_RS09265	SM00387	Histidine kinase-like ATPases
BJL90_RS09270	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS09270	SM00448	cheY-homologous receiver domain
BJL90_RS09290	SM00354	helix_turn _helix lactose operon repressor
BJL90_RS09295	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS09320	SM00710	Parallel beta-helix repeats
BJL90_RS09335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS09335	SM00895	BJL90_RS09335
BJL90_RS09340	SM00829	Enoylreductase
BJL90_RS09380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS09380	SM00895	BJL90_RS09380
BJL90_RS09410	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BJL90_RS09425	SM01230	BJL90_RS09425
BJL90_RS09440	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BJL90_RS09460	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BJL90_RS09465	SM00851	MGS-like domain
BJL90_RS09465	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BJL90_RS09475	SM00871	Bacterial transcription activator, effector binding domain
BJL90_RS09485	SM00098	Alkaline phosphatase homologues
BJL90_RS09500	SM00857	Resolvase, N terminal domain
BJL90_RS09520	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS09535	SM00448	cheY-homologous receiver domain
BJL90_RS09535	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS09540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS09540	SM00387	Histidine kinase-like ATPases
BJL90_RS09540	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS09575	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS09595	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS09620	SM00244	prohibitin homologues
BJL90_RS09635	SM00448	cheY-homologous receiver domain
BJL90_RS09635	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS09640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS09640	SM00387	Histidine kinase-like ATPases
BJL90_RS09640	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS09650	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJL90_RS09650	SM01091	Transporter associated domain
BJL90_RS09660	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS09745	SM00838	Elongation factor G C-terminus
BJL90_RS09755	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BJL90_RS09760	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BJL90_RS09885	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJL90_RS09885	SM00924	MgtE intracellular N domain
BJL90_RS09930	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJL90_RS09930	SM00387	Histidine kinase-like ATPases
BJL90_RS09935	SM00448	cheY-homologous receiver domain
BJL90_RS09935	SM00850	LytTr DNA-binding domain
BJL90_RS09955	SM00900	BJL90_RS09955
BJL90_RS09970	SM00100	Cyclic nucleotide-monophosphate binding domain
BJL90_RS09970	SM00419	helix_turn_helix, cAMP Regulatory protein
BJL90_RS09980	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS09985	SM00899	BJL90_RS09985
BJL90_RS10005	SM00450	Rhodanese Homology Domain
BJL90_RS10115	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS10120	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
BJL90_RS10165	SM01230	BJL90_RS10165
BJL90_RS10175	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS10195	SM00387	Histidine kinase-like ATPases
BJL90_RS10200	SM00421	helix_turn_helix, Lux Regulon
BJL90_RS10200	SM00448	cheY-homologous receiver domain
BJL90_RS10210	SM00900	BJL90_RS10210
BJL90_RS10220	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS10270	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BJL90_RS10275	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS10285	SM00822	BJL90_RS10285
BJL90_RS10285	SM00823	Phosphopantetheine attachment site
BJL90_RS10285	SM00825	Beta-ketoacyl synthase
BJL90_RS10285	SM00826	BJL90_RS10285
BJL90_RS10290	SM00823	Phosphopantetheine attachment site
BJL90_RS10295	SM00823	Phosphopantetheine attachment site
BJL90_RS10300	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS10310	SM00822	BJL90_RS10310
BJL90_RS10310	SM00823	Phosphopantetheine attachment site
BJL90_RS10310	SM00825	Beta-ketoacyl synthase
BJL90_RS10310	SM01294	BJL90_RS10310
BJL90_RS10315	SM00822	BJL90_RS10315
BJL90_RS10315	SM00823	Phosphopantetheine attachment site
BJL90_RS10315	SM00825	Beta-ketoacyl synthase
BJL90_RS10315	SM00826	BJL90_RS10315
BJL90_RS10315	SM01294	BJL90_RS10315
BJL90_RS10320	SM00822	BJL90_RS10320
BJL90_RS10320	SM00823	Phosphopantetheine attachment site
BJL90_RS10320	SM00825	Beta-ketoacyl synthase
BJL90_RS10320	SM00826	BJL90_RS10320
BJL90_RS10325	SM00822	BJL90_RS10325
BJL90_RS10325	SM00823	Phosphopantetheine attachment site
BJL90_RS10325	SM00825	Beta-ketoacyl synthase
BJL90_RS10325	SM00826	BJL90_RS10325
BJL90_RS10330	SM00822	BJL90_RS10330
BJL90_RS10330	SM00823	Phosphopantetheine attachment site
BJL90_RS10330	SM00825	Beta-ketoacyl synthase
BJL90_RS10330	SM00826	BJL90_RS10330
BJL90_RS10340	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BJL90_RS10380	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS10385	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS10405	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS10430	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS10440	SM00529	Helix-turn-helix diphteria tox regulatory element
BJL90_RS10445	SM00899	BJL90_RS10445
BJL90_RS10455	SM00420	helix_turn_helix, Deoxyribose operon repressor
BJL90_RS10455	SM01134	BJL90_RS10455
BJL90_RS10495	SM00563	Phosphate acyltransferases
BJL90_RS10505	SM00257	Lysin motif
BJL90_RS10510	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BJL90_RS10515	SM01130	BJL90_RS10515
BJL90_RS10550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS10570	SM00897	FIST N domain
BJL90_RS10570	SM01204	BJL90_RS10570
BJL90_RS10575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS10580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS10610	SM00905	Dihydroneopterin aldolase
BJL90_RS10675	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJL90_RS10685	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS10735	SM00478	endonuclease III
BJL90_RS10740	SM00842	Cell division protein FtsA
BJL90_RS10745	SM01208	BJL90_RS10745
BJL90_RS10785	SM00855	Phosphoglycerate mutase family
BJL90_RS10810	SM01321	BJL90_RS10810
BJL90_RS10840	SM00646	BJL90_RS10840
BJL90_RS10880	SM00357	Cold shock protein domain
BJL90_RS10920	SM00917	LeuA allosteric (dimerisation) domain
BJL90_RS10925	SM00917	LeuA allosteric (dimerisation) domain
BJL90_RS10940	SM01329	BJL90_RS10940
BJL90_RS10975	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BJL90_RS10980	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS11010	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BJL90_RS11020	SM00873	B3/4 domain
BJL90_RS11020	SM00874	tRNA synthetase B5 domain
BJL90_RS11020	SM00896	Ferredoxin-fold anticodon binding domain
BJL90_RS11040	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS11055	SM00890	Domain of unknown function
BJL90_RS11070	SM01264	BJL90_RS11070
BJL90_RS11150	SM00091	PAS domain
BJL90_RS11190	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS11235	SM00487	DEAD-like helicases superfamily
BJL90_RS11235	SM00490	helicase superfamily c-terminal domain
BJL90_RS11255	SM00463	Small MutS-related domain
BJL90_RS11255	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BJL90_RS11255	SM00534	ATPase domain of DNA mismatch repair MUTS family
BJL90_RS11265	SM00387	Histidine kinase-like ATPases
BJL90_RS11265	SM00448	cheY-homologous receiver domain
BJL90_RS11270	SM00387	Histidine kinase-like ATPases
BJL90_RS11270	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS11270	SM00448	cheY-homologous receiver domain
BJL90_RS11275	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS11275	SM00448	cheY-homologous receiver domain
BJL90_RS11300	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS11320	SM00836	DALR anticodon binding domain
BJL90_RS11320	SM01016	Arginyl tRNA synthetase N terminal dom
BJL90_RS11340	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS11350	SM00028	Tetratricopeptide repeats
BJL90_RS11355	SM00852	Probable molybdopterin binding domain
BJL90_RS11360	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BJL90_RS11385	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS11400	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS11405	SM00855	Phosphoglycerate mutase family
BJL90_RS11410	SM00091	PAS domain
BJL90_RS11410	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS11520	SM00226	Low molecular weight phosphatase family
BJL90_RS11565	SM00448	cheY-homologous receiver domain
BJL90_RS11565	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS11570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS11570	SM00387	Histidine kinase-like ATPases
BJL90_RS11570	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS11790	SM00852	Probable molybdopterin binding domain
BJL90_RS11795	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BJL90_RS11805	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BJL90_RS11830	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS11845	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJL90_RS11855	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS11855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS11900	SM00796	Allophanate hydrolase subunit 1
BJL90_RS11905	SM00797	Allophanate hydrolase subunit 2
BJL90_RS11910	SM00387	Histidine kinase-like ATPases
BJL90_RS11910	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS11915	SM00448	cheY-homologous receiver domain
BJL90_RS11915	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS11940	SM00919	Malic enzyme, NAD binding domain
BJL90_RS11940	SM01274	BJL90_RS11940
BJL90_RS11945	SM00091	PAS domain
BJL90_RS11945	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS11980	SM00232	JAB/MPN domain
BJL90_RS12040	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS12050	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS12065	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS12065	SM00876	Biotin and Thiamin Synthesis associated domain
BJL90_RS12105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS12105	SM00866	BJL90_RS12105
BJL90_RS12125	SM00876	Biotin and Thiamin Synthesis associated domain
BJL90_RS12155	SM00244	prohibitin homologues
BJL90_RS12170	SM01325	BJL90_RS12170
BJL90_RS12175	SM00854	Bacterial capsule synthesis protein PGA_cap
BJL90_RS12190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS12190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS12195	SM00851	MGS-like domain
BJL90_RS12195	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BJL90_RS12215	SM00354	helix_turn _helix lactose operon repressor
BJL90_RS12230	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS12285	SM01211	BJL90_RS12285
BJL90_RS12290	SM00420	helix_turn_helix, Deoxyribose operon repressor
BJL90_RS12290	SM01134	BJL90_RS12290
BJL90_RS12320	SM00448	cheY-homologous receiver domain
BJL90_RS12320	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS12325	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS12325	SM00387	Histidine kinase-like ATPases
BJL90_RS12325	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS12345	SM00052	Putative diguanylate phosphodiesterase
BJL90_RS12345	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJL90_RS12345	SM00267	diguanylate cyclase
BJL90_RS12360	SM00448	cheY-homologous receiver domain
BJL90_RS12360	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS12365	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS12365	SM00387	Histidine kinase-like ATPases
BJL90_RS12365	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS12380	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS12400	SM00052	Putative diguanylate phosphodiesterase
BJL90_RS12400	SM00062	Bacterial periplasmic substrate-binding proteins
BJL90_RS12400	SM00267	diguanylate cyclase
BJL90_RS12405	SM00341	Helicase and RNase D C-terminal
BJL90_RS12405	SM00487	DEAD-like helicases superfamily
BJL90_RS12405	SM00490	helicase superfamily c-terminal domain
BJL90_RS12405	SM00956	BJL90_RS12405
BJL90_RS12455	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS12465	SM00938	Nitrogen regulatory protein P-II
BJL90_RS12470	SM00938	Nitrogen regulatory protein P-II
BJL90_RS12495	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS12505	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS12505	SM01049	BJL90_RS12505
BJL90_RS12520	SM00357	Cold shock protein domain
BJL90_RS12580	SM00900	BJL90_RS12580
BJL90_RS12595	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS12610	SM00852	Probable molybdopterin binding domain
BJL90_RS12615	SM00852	Probable molybdopterin binding domain
BJL90_RS12625	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BJL90_RS12625	SM00481	DNA polymerase alpha chain like domain
BJL90_RS12625	SM00483	DNA polymerase X family
BJL90_RS12635	SM00267	diguanylate cyclase
BJL90_RS12650	SM00481	DNA polymerase alpha chain like domain
BJL90_RS12660	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS12665	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS12675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS12680	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BJL90_RS12685	SM00028	Tetratricopeptide repeats
BJL90_RS12685	SM00220	Serine/Threonine protein kinases, catalytic domain
BJL90_RS12685	SM00267	diguanylate cyclase
BJL90_RS12715	SM00387	Histidine kinase-like ATPases
BJL90_RS12720	SM00421	helix_turn_helix, Lux Regulon
BJL90_RS12720	SM00448	cheY-homologous receiver domain
BJL90_RS12745	SM00857	Resolvase, N terminal domain
BJL90_RS12755	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS12760	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS12765	SM01040	BRO family, N-terminal domain
BJL90_RS12775	SM00966	SpoVT / AbrB like domain 
BJL90_RS12840	SM00507	HNH nucleases
BJL90_RS12965	SM00646	BJL90_RS12965
BJL90_RS12995	SM00507	HNH nucleases
BJL90_RS13035	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BJL90_RS13035	SM00474	3'-5' exonuclease
BJL90_RS13035	SM00475	5'-3' exonuclease
BJL90_RS13035	SM00482	DNA polymerase A domain
BJL90_RS13065	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS13110	SM00910	BJL90_RS13110
BJL90_RS13250	SM00491	BJL90_RS13250
BJL90_RS13275	SM00938	Nitrogen regulatory protein P-II
BJL90_RS13285	SM00563	Phosphate acyltransferases
BJL90_RS13365	SM00870	BJL90_RS13365
BJL90_RS13380	SM00981	BJL90_RS13380
BJL90_RS13390	SM00852	Probable molybdopterin binding domain
BJL90_RS13410	SM00387	Histidine kinase-like ATPases
BJL90_RS13460	SM00857	Resolvase, N terminal domain
BJL90_RS13525	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS13530	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS13710	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS13730	SM00881	CoA binding domain
BJL90_RS13765	SM00636	BJL90_RS13765
BJL90_RS13830	SM00287	Bacterial SH3 domain homologues
BJL90_RS13860	SM00481	DNA polymerase alpha chain like domain
BJL90_RS13865	SM00387	Histidine kinase-like ATPases
BJL90_RS13880	SM00900	BJL90_RS13880
BJL90_RS13955	SM00851	MGS-like domain
BJL90_RS13970	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS13980	SM00316	Ribosomal protein S1-like RNA-binding domain
BJL90_RS14010	SM01103	BJL90_RS14010
BJL90_RS14025	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS14070	SM00936	Penicillin-binding protein 5, C-terminal domain 
BJL90_RS14075	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BJL90_RS14170	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS14195	SM00465	GIY-YIG type nucleases (URI domain)
BJL90_RS14210	SM00507	HNH nucleases
BJL90_RS14310	SM00060	Fibronectin type 3 domain
BJL90_RS14325	SM00646	BJL90_RS14325
BJL90_RS14330	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS14365	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BJL90_RS14370	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS14395	SM01323	BJL90_RS14395
BJL90_RS14445	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS14445	SM00954	Region found in RelA / SpoT proteins
BJL90_RS14455	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS14460	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS14505	SM00091	PAS domain
BJL90_RS14505	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS14575	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS14620	SM00984	UDP binding domain
BJL90_RS14680	SM00220	Serine/Threonine protein kinases, catalytic domain
BJL90_RS14725	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BJL90_RS14745	SM00732	Likely ribonuclease with RNase H fold.
BJL90_RS14770	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS14790	SM00422	helix_turn_helix, mercury resistance
BJL90_RS14800	SM00257	Lysin motif
BJL90_RS14830	SM00422	helix_turn_helix, mercury resistance
BJL90_RS14830	SM00871	Bacterial transcription activator, effector binding domain
BJL90_RS14875	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS14875	SM00871	Bacterial transcription activator, effector binding domain
BJL90_RS14890	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJL90_RS14890	SM00091	PAS domain
BJL90_RS14890	SM00387	Histidine kinase-like ATPases
BJL90_RS14890	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS14905	SM00387	Histidine kinase-like ATPases
BJL90_RS14905	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS14910	SM00448	cheY-homologous receiver domain
BJL90_RS14915	SM00448	cheY-homologous receiver domain
BJL90_RS14920	SM00387	Histidine kinase-like ATPases
BJL90_RS14920	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS14940	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS14945	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS14950	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS14955	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS14955	SM00448	cheY-homologous receiver domain
BJL90_RS14995	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS15000	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS15035	SM00842	Cell division protein FtsA
BJL90_RS15090	SM00841	Elongation factor P, C-terminal
BJL90_RS15090	SM01185	BJL90_RS15090
BJL90_RS15100	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS15185	SM00861	Transketolase, pyrimidine binding domain
BJL90_RS15190	SM00363	S4 RNA-binding domain
BJL90_RS15210	SM00448	cheY-homologous receiver domain
BJL90_RS15220	SM00479	BJL90_RS15220
BJL90_RS15285	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BJL90_RS15290	SM00936	Penicillin-binding protein 5, C-terminal domain 
BJL90_RS15295	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJL90_RS15335	SM00936	Penicillin-binding protein 5, C-terminal domain 
BJL90_RS15370	SM00387	Histidine kinase-like ATPases
BJL90_RS15370	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS15375	SM00448	cheY-homologous receiver domain
BJL90_RS15375	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS15395	SM00434	DNA Topoisomerase IV
BJL90_RS15400	SM00387	Histidine kinase-like ATPases
BJL90_RS15400	SM00433	TopoisomeraseII
BJL90_RS15415	SM00858	BJL90_RS15415
BJL90_RS15420	SM00091	PAS domain
BJL90_RS15420	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS15430	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS15445	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS15470	SM00877	BJL90_RS15470
BJL90_RS15505	SM00877	BJL90_RS15505
BJL90_RS15510	SM00877	BJL90_RS15510
BJL90_RS15515	SM00877	BJL90_RS15515
BJL90_RS15520	SM00387	Histidine kinase-like ATPases
BJL90_RS15525	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS15525	SM00448	cheY-homologous receiver domain
BJL90_RS15540	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS15550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS15550	SM00387	Histidine kinase-like ATPases
BJL90_RS15550	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS15555	SM00448	cheY-homologous receiver domain
BJL90_RS15555	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS15560	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS15585	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS15590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS15665	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS15670	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS15725	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS15740	SM00853	MutL C terminal dimerisation domain
BJL90_RS15740	SM01340	BJL90_RS15740
BJL90_RS15745	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BJL90_RS15745	SM00534	ATPase domain of DNA mismatch repair MUTS family
BJL90_RS15750	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS15765	SM00644	BJL90_RS15765
BJL90_RS15830	SM00257	Lysin motif
BJL90_RS15920	SM00470	ParB-like nuclease domain
BJL90_RS16005	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS16015	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS16055	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS16060	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS16075	SM00857	Resolvase, N terminal domain
BJL90_RS16095	SM00422	helix_turn_helix, mercury resistance
BJL90_RS16115	SM00138	Methyltransferase, chemotaxis proteins 
BJL90_RS16120	SM00316	Ribosomal protein S1-like RNA-binding domain
BJL90_RS16140	SM00855	Phosphoglycerate mutase family
BJL90_RS16175	SM00363	S4 RNA-binding domain
BJL90_RS16185	SM00998	Adenylosuccinate lyase C-terminus
BJL90_RS16200	SM00481	DNA polymerase alpha chain like domain
BJL90_RS16210	SM00322	K homology RNA-binding domain
BJL90_RS16210	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS16230	SM00507	HNH nucleases
BJL90_RS16255	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS16260	SM00450	Rhodanese Homology Domain
BJL90_RS16265	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS16265	SM00843	BJL90_RS16265
BJL90_RS16290	SM00316	Ribosomal protein S1-like RNA-binding domain
BJL90_RS16290	SM00322	K homology RNA-binding domain
BJL90_RS16295	SM01387	BJL90_RS16295
BJL90_RS16300	SM00904	Riboflavin kinase
BJL90_RS16335	SM00316	Ribosomal protein S1-like RNA-binding domain
BJL90_RS16345	SM00479	BJL90_RS16345
BJL90_RS16345	SM00481	DNA polymerase alpha chain like domain
BJL90_RS16360	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BJL90_RS16440	SM00260	Two component signalling adaptor domain
BJL90_RS16445	SM00073	Histidine Phosphotransfer domain
BJL90_RS16445	SM00260	Two component signalling adaptor domain
BJL90_RS16445	SM00387	Histidine kinase-like ATPases
BJL90_RS16445	SM01231	BJL90_RS16445
BJL90_RS16450	SM00448	cheY-homologous receiver domain
BJL90_RS16465	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS16465	SM00962	SRP54-type protein, GTPase domain
BJL90_RS16500	SM00448	cheY-homologous receiver domain
BJL90_RS16565	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS16605	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS16605	SM01086	C-terminal, D2-small domain, of ClpB protein
BJL90_RS16615	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BJL90_RS16615	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BJL90_RS16615	SM00493	BJL90_RS16615
BJL90_RS16625	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS16670	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS16670	SM00962	SRP54-type protein, GTPase domain
BJL90_RS16670	SM00963	SRP54-type protein, helical bundle domain
BJL90_RS16680	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS16680	SM00962	SRP54-type protein, GTPase domain
BJL90_RS16680	SM00963	SRP54-type protein, helical bundle domain
BJL90_RS16685	SM00968	SMC proteins Flexible Hinge Domain
BJL90_RS16690	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS16695	SM00358	Double-stranded RNA binding motif
BJL90_RS16695	SM00535	Ribonuclease III family
BJL90_RS16700	SM00825	Beta-ketoacyl synthase
BJL90_RS16710	SM00822	BJL90_RS16710
BJL90_RS16715	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BJL90_RS16780	SM00487	DEAD-like helicases superfamily
BJL90_RS16780	SM00490	helicase superfamily c-terminal domain
BJL90_RS16785	SM01120	BJL90_RS16785
BJL90_RS16785	SM01121	BJL90_RS16785
BJL90_RS16800	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BJL90_RS16815	SM00220	Serine/Threonine protein kinases, catalytic domain
BJL90_RS16815	SM00740	BJL90_RS16815
BJL90_RS16820	SM00331	Sigma factor PP2C-like phosphatases
BJL90_RS16820	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BJL90_RS16855	SM00487	DEAD-like helicases superfamily
BJL90_RS16855	SM00490	helicase superfamily c-terminal domain
BJL90_RS16865	SM01409	BJL90_RS16865
BJL90_RS16870	SM00072	Guanylate kinase homologues.
BJL90_RS16900	SM00363	S4 RNA-binding domain
BJL90_RS16930	SM00363	S4 RNA-binding domain
BJL90_RS16975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS16975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS16990	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS16995	SM00487	DEAD-like helicases superfamily
BJL90_RS17020	SM00857	Resolvase, N terminal domain
BJL90_RS17050	SM01207	BJL90_RS17050
BJL90_RS17060	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BJL90_RS17095	SM00091	PAS domain
BJL90_RS17095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS17095	SM00387	Histidine kinase-like ATPases
BJL90_RS17095	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS17100	SM00448	cheY-homologous receiver domain
BJL90_RS17100	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS17135	SM00864	Tubulin/FtsZ family, GTPase domain
BJL90_RS17135	SM00865	Tubulin/FtsZ family, C-terminal domain
BJL90_RS17195	SM00740	BJL90_RS17195
BJL90_RS17230	SM01133	BJL90_RS17230
BJL90_RS17365	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS17400	SM01060	BJL90_RS17400
BJL90_RS17410	SM00052	Putative diguanylate phosphodiesterase
BJL90_RS17435	SM00487	DEAD-like helicases superfamily
BJL90_RS17475	SM01350	BJL90_RS17475
BJL90_RS17485	SM01018	B12 binding domain
BJL90_RS17505	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS17515	SM00878	Biotin carboxylase C-terminal domain
BJL90_RS17540	SM01018	B12 binding domain
BJL90_RS17555	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BJL90_RS17575	SM00387	Histidine kinase-like ATPases
BJL90_RS17575	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS17610	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS17620	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS17630	SM00062	Bacterial periplasmic substrate-binding proteins
BJL90_RS17650	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS17695	SM00400	zinc finger
BJL90_RS17695	SM00493	BJL90_RS17695
BJL90_RS17700	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS17730	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS17740	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS17740	SM00387	Histidine kinase-like ATPases
BJL90_RS17740	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS17745	SM00448	cheY-homologous receiver domain
BJL90_RS17745	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS17775	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS17815	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJL90_RS17850	SM00014	Acid phosphatase homologues
BJL90_RS17860	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS17915	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS17930	SM00271	DnaJ molecular chaperone homology domain
BJL90_RS17950	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS17955	SM00838	Elongation factor G C-terminus
BJL90_RS17995	SM00448	cheY-homologous receiver domain
BJL90_RS17995	SM00850	LytTr DNA-binding domain
BJL90_RS18000	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS18025	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS18050	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS18070	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS18075	SM00028	Tetratricopeptide repeats
BJL90_RS18080	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS18090	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BJL90_RS18100	SM00487	DEAD-like helicases superfamily
BJL90_RS18100	SM00490	helicase superfamily c-terminal domain
BJL90_RS18145	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS18160	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BJL90_RS18175	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BJL90_RS18180	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS18190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS18195	SM00448	cheY-homologous receiver domain
BJL90_RS18195	SM01012	BJL90_RS18195
BJL90_RS18200	SM01230	BJL90_RS18200
BJL90_RS18205	SM00845	GatB domain
BJL90_RS18280	SM00829	Enoylreductase
BJL90_RS18300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS18300	SM00895	BJL90_RS18300
BJL90_RS18315	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS18320	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS18325	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS18330	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS18380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS18380	SM00895	BJL90_RS18380
BJL90_RS18385	SM00831	Cation transporter/ATPase, N-terminus
BJL90_RS18420	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS18435	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS18460	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS18490	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS18495	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS18500	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS18520	SM00829	Enoylreductase
BJL90_RS18535	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS18540	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS18540	SM00448	cheY-homologous receiver domain
BJL90_RS18545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS18555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS18555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS18575	SM00155	Phospholipase D. Active site motifs.
BJL90_RS18580	SM00534	ATPase domain of DNA mismatch repair MUTS family
BJL90_RS18595	SM01116	BJL90_RS18595
BJL90_RS18620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS18635	SM00518	AP endonuclease family 2
BJL90_RS18645	SM00344	helix_turn_helix ASNC type
BJL90_RS18820	SM00465	GIY-YIG type nucleases (URI domain)
BJL90_RS18835	SM00448	cheY-homologous receiver domain
BJL90_RS18835	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS18840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS18840	SM00387	Histidine kinase-like ATPases
BJL90_RS18840	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS18860	SM00646	BJL90_RS18860
BJL90_RS18945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS18945	SM00387	Histidine kinase-like ATPases
BJL90_RS18945	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS18950	SM00448	cheY-homologous receiver domain
BJL90_RS18950	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS18975	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BJL90_RS18985	SM00257	Lysin motif
BJL90_RS18985	SM00636	BJL90_RS18985
BJL90_RS19020	SM00421	helix_turn_helix, Lux Regulon
BJL90_RS19020	SM00448	cheY-homologous receiver domain
BJL90_RS19045	SM00448	cheY-homologous receiver domain
BJL90_RS19050	SM00091	PAS domain
BJL90_RS19050	SM00387	Histidine kinase-like ATPases
BJL90_RS19055	SM00900	BJL90_RS19055
BJL90_RS19095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS19095	SM00387	Histidine kinase-like ATPases
BJL90_RS19095	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS19100	SM00448	cheY-homologous receiver domain
BJL90_RS19100	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS19120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS19130	SM00852	Probable molybdopterin binding domain
BJL90_RS19145	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BJL90_RS19145	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BJL90_RS19155	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS19170	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS19190	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS19205	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS19235	SM00900	BJL90_RS19235
BJL90_RS19280	SM00331	Sigma factor PP2C-like phosphatases
BJL90_RS19350	SM00450	Rhodanese Homology Domain
BJL90_RS19355	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS19405	SM00357	Cold shock protein domain
BJL90_RS19420	SM01018	B12 binding domain
BJL90_RS19435	SM00487	DEAD-like helicases superfamily
BJL90_RS19435	SM00490	helicase superfamily c-terminal domain
BJL90_RS19445	SM00342	helix_turn_helix, arabinose operon control protein
BJL90_RS19445	SM00871	Bacterial transcription activator, effector binding domain
BJL90_RS19465	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS19520	SM00903	Flavin reductase like domain
BJL90_RS19545	SM01130	BJL90_RS19545
BJL90_RS19575	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS19590	SM00257	Lysin motif
BJL90_RS19615	SM00873	B3/4 domain
BJL90_RS19650	SM01321	BJL90_RS19650
BJL90_RS19685	SM00316	Ribosomal protein S1-like RNA-binding domain
BJL90_RS19685	SM00357	Cold shock protein domain
BJL90_RS19685	SM00955	BJL90_RS19685
BJL90_RS19705	SM01192	BJL90_RS19705
BJL90_RS19705	SM01193	BJL90_RS19705
BJL90_RS19725	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BJL90_RS19850	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS19900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS19905	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS19920	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS19925	SM00387	Histidine kinase-like ATPases
BJL90_RS19930	SM00448	cheY-homologous receiver domain
BJL90_RS19930	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS19935	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS19960	SM00331	Sigma factor PP2C-like phosphatases
BJL90_RS19965	SM00267	diguanylate cyclase
BJL90_RS19970	SM01130	BJL90_RS19970
BJL90_RS19980	SM00858	BJL90_RS19980
BJL90_RS19995	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BJL90_RS20000	SM00346	helix_turn_helix isocitrate lyase regulation
BJL90_RS20010	SM00448	cheY-homologous receiver domain
BJL90_RS20015	SM00091	PAS domain
BJL90_RS20015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS20015	SM00387	Histidine kinase-like ATPases
BJL90_RS20015	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS20040	SM00448	cheY-homologous receiver domain
BJL90_RS20045	SM00448	cheY-homologous receiver domain
BJL90_RS20050	SM00091	PAS domain
BJL90_RS20050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS20050	SM00387	Histidine kinase-like ATPases
BJL90_RS20050	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS20055	SM00947	Carbonic anhydrase
BJL90_RS20060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS20060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS20115	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS20170	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BJL90_RS20170	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BJL90_RS20170	SM00493	BJL90_RS20170
BJL90_RS20175	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20180	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20185	SM00487	DEAD-like helicases superfamily
BJL90_RS20185	SM00490	helicase superfamily c-terminal domain
BJL90_RS20205	SM00260	Two component signalling adaptor domain
BJL90_RS20205	SM00448	cheY-homologous receiver domain
BJL90_RS20210	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS20210	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS20230	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS20240	SM01018	B12 binding domain
BJL90_RS20265	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20335	SM01130	BJL90_RS20335
BJL90_RS20350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJL90_RS20350	SM00895	BJL90_RS20350
BJL90_RS20375	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20380	SM00422	helix_turn_helix, mercury resistance
BJL90_RS20385	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20400	SM01005	Alanine racemase, C-terminal domain
BJL90_RS20415	SM00387	Histidine kinase-like ATPases
BJL90_RS20415	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS20420	SM00448	cheY-homologous receiver domain
BJL90_RS20420	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS20425	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJL90_RS20430	SM00422	helix_turn_helix, mercury resistance
BJL90_RS20440	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20450	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20460	SM00387	Histidine kinase-like ATPases
BJL90_RS20460	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS20465	SM00448	cheY-homologous receiver domain
BJL90_RS20465	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS20475	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20525	SM00636	BJL90_RS20525
BJL90_RS20540	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20555	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20565	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS20570	SM00100	Cyclic nucleotide-monophosphate binding domain
BJL90_RS20570	SM00419	helix_turn_helix, cAMP Regulatory protein
BJL90_RS20575	SM00900	BJL90_RS20575
BJL90_RS20605	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS20610	SM00421	helix_turn_helix, Lux Regulon
BJL90_RS20610	SM00448	cheY-homologous receiver domain
BJL90_RS20630	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20645	SM00091	PAS domain
BJL90_RS20645	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20655	SM00822	BJL90_RS20655
BJL90_RS20665	SM00882	Coenzyme A transferase
BJL90_RS20680	SM00344	helix_turn_helix ASNC type
BJL90_RS20720	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS20770	SM00849	Metallo-beta-lactamase superfamily
BJL90_RS20780	SM01321	BJL90_RS20780
BJL90_RS20790	SM00387	Histidine kinase-like ATPases
BJL90_RS20790	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS20795	SM00448	cheY-homologous receiver domain
BJL90_RS20795	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS20870	SM00954	Region found in RelA / SpoT proteins
BJL90_RS20880	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJL90_RS20890	SM00257	Lysin motif
BJL90_RS20930	SM00919	Malic enzyme, NAD binding domain
BJL90_RS20930	SM01274	BJL90_RS20930
BJL90_RS20940	SM00052	Putative diguanylate phosphodiesterase
BJL90_RS20940	SM00267	diguanylate cyclase
BJL90_RS20940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS20955	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS20970	SM00028	Tetratricopeptide repeats
BJL90_RS20970	SM00671	Sel1-like repeats.
BJL90_RS20985	SM00763	PrkA AAA domain
BJL90_RS20990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS20995	SM00260	Two component signalling adaptor domain
BJL90_RS21000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJL90_RS21000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS21005	SM00316	Ribosomal protein S1-like RNA-binding domain
BJL90_RS21020	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS21025	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS21030	SM00448	cheY-homologous receiver domain
BJL90_RS21030	SM00862	Transcriptional regulatory protein, C terminal
BJL90_RS21035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJL90_RS21035	SM00387	Histidine kinase-like ATPases
BJL90_RS21035	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS21050	SM00448	cheY-homologous receiver domain
BJL90_RS21050	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJL90_RS21055	SM00387	Histidine kinase-like ATPases
BJL90_RS21055	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS21055	SM00448	cheY-homologous receiver domain
BJL90_RS21060	SM00897	FIST N domain
BJL90_RS21060	SM01204	BJL90_RS21060
BJL90_RS21070	SM00267	diguanylate cyclase
BJL90_RS21070	SM00387	Histidine kinase-like ATPases
BJL90_RS21070	SM00388	His Kinase A (phosphoacceptor) domain
BJL90_RS21070	SM00448	cheY-homologous receiver domain
BJL90_RS21090	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS21135	SM00530	Helix-turn-helix XRE-family like proteins 
BJL90_RS21150	SM00382	ATPases associated with a variety of cellular activities
BJL90_RS21155	SM00062	Bacterial periplasmic substrate-binding proteins
BJL90_RS21180	SM00028	Tetratricopeptide repeats
BJL90_RS21185	SM00028	Tetratricopeptide repeats
BJL90_RS21220	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJL90_RS21255	SM00382	ATPases associated with a variety of cellular activities
