CLFO_RS03815 3a088d905ce7d8e9e30b8d9edbb17e36 223 SUPERFAMILY SSF48008 88 217 6.02E-22 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS03815 3a088d905ce7d8e9e30b8d9edbb17e36 223 SUPERFAMILY SSF46785 4 71 4.26E-19 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03815 3a088d905ce7d8e9e30b8d9edbb17e36 223 Pfam PF07729 FCD domain 92 212 1.1E-19 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS03815 3a088d905ce7d8e9e30b8d9edbb17e36 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 6.3E-6 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS03815 3a088d905ce7d8e9e30b8d9edbb17e36 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 6.3E-6 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS03815 3a088d905ce7d8e9e30b8d9edbb17e36 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 4.4E-18 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS03815 3a088d905ce7d8e9e30b8d9edbb17e36 223 Gene3D G3DSA:1.10.10.10 4 72 1.1E-22 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03815 3a088d905ce7d8e9e30b8d9edbb17e36 223 SMART SM00895 92 213 6.5E-17 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS03815 3a088d905ce7d8e9e30b8d9edbb17e36 223 SMART SM00345 8 67 3.1E-18 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS03815 3a088d905ce7d8e9e30b8d9edbb17e36 223 Gene3D G3DSA:1.20.120.530 87 218 9.9E-24 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS13835 ac04e5f5d67867a281437e2e08bcc383 296 Gene3D G3DSA:3.40.190.10 92 187 1.9E-12 T 25-04-2017 CLFO_RS13835 ac04e5f5d67867a281437e2e08bcc383 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-9 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS13835 ac04e5f5d67867a281437e2e08bcc383 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-9 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS13835 ac04e5f5d67867a281437e2e08bcc383 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-9 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS13835 ac04e5f5d67867a281437e2e08bcc383 296 Gene3D G3DSA:3.40.190.10 188 261 4.7E-17 T 25-04-2017 CLFO_RS13835 ac04e5f5d67867a281437e2e08bcc383 296 SUPERFAMILY SSF46785 1 86 2.07E-22 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13835 ac04e5f5d67867a281437e2e08bcc383 296 Gene3D G3DSA:1.10.10.10 1 85 8.2E-26 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13835 ac04e5f5d67867a281437e2e08bcc383 296 SUPERFAMILY SSF53850 92 290 1.19E-29 T 25-04-2017 CLFO_RS13835 ac04e5f5d67867a281437e2e08bcc383 296 Pfam PF03466 LysR substrate binding domain 92 290 3.8E-28 T 25-04-2017 IPR005119 LysR, substrate-binding CLFO_RS13835 ac04e5f5d67867a281437e2e08bcc383 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.4E-20 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Gene3D G3DSA:1.10.8.280 287 410 3.9E-42 T 25-04-2017 CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Gene3D G3DSA:3.40.50.300 823 942 2.5E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Gene3D G3DSA:3.40.50.300 607 694 2.5E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Gene3D G3DSA:3.40.50.300 7 91 5.1E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Gene3D G3DSA:3.40.50.300 482 602 5.1E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Gene3D G3DSA:3.30.1490.20 202 249 1.9E-28 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Gene3D G3DSA:3.30.1490.20 133 155 1.9E-28 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 927 0.0 T 25-04-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Gene3D G3DSA:1.20.1580.10 696 822 5.8E-56 T 25-04-2017 CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 ProSitePatterns PS00211 ABC transporters family signature. 832 846 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Gene3D G3DSA:1.20.1580.10 411 481 2.1E-55 T 25-04-2017 CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Gene3D G3DSA:1.20.1580.10 250 283 2.1E-55 T 25-04-2017 CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Gene3D G3DSA:1.20.1580.10 93 131 2.1E-55 T 25-04-2017 CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Pfam PF00005 ABC transporter 626 862 1.2E-9 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 942 23.207 T 25-04-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 SMART SM00382 635 910 1.4E-4 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 SMART SM00382 25 568 21.0 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 SUPERFAMILY SSF52540 619 916 2.78E-52 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 SUPERFAMILY SSF52540 10 206 7.14E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 SUPERFAMILY SSF52540 434 573 7.14E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17680 4ade79a9947eee12d67cea7830c2578e 945 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15610 3513796287db9c9a4b75dd35725bc481 653 SUPERFAMILY SSF52540 398 645 2.43E-91 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15610 3513796287db9c9a4b75dd35725bc481 653 SMART SM00382 434 606 1.4E-16 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15610 3513796287db9c9a4b75dd35725bc481 653 Pfam PF00005 ABC transporter 426 574 1.6E-32 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15610 3513796287db9c9a4b75dd35725bc481 653 SUPERFAMILY SSF90123 123 392 2.75E-85 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS15610 3513796287db9c9a4b75dd35725bc481 653 SUPERFAMILY SSF90123 45 89 2.75E-85 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS15610 3513796287db9c9a4b75dd35725bc481 653 ProSitePatterns PS00211 ABC transporters family signature. 546 560 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15610 3513796287db9c9a4b75dd35725bc481 653 Gene3D G3DSA:1.20.1560.10 45 391 1.3E-84 T 25-04-2017 CLFO_RS15610 3513796287db9c9a4b75dd35725bc481 653 Gene3D G3DSA:3.40.50.300 409 638 2.4E-78 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15610 3513796287db9c9a4b75dd35725bc481 653 Pfam PF00664 ABC transporter transmembrane region 58 362 2.8E-54 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.9E-46 T 25-04-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 330 1.1E-130 T 25-04-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.3E-26 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.3E-26 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 3.3E-26 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 295 318 3.3E-26 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 Gene3D G3DSA:3.40.50.1370 5 144 3.7E-56 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 Gene3D G3DSA:3.40.50.1370 145 317 1.2E-74 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 7.0E-31 T 25-04-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 7.0E-31 T 25-04-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 7.0E-31 T 25-04-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 7.0E-31 T 25-04-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 309 320 7.0E-31 T 25-04-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 330 82.045 T 25-04-2017 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 328 5.4E-59 T 25-04-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CLFO_RS20155 aad0ebe6f438a8daff12aad2e12ff7a2 330 SUPERFAMILY SSF53671 4 330 9.82E-104 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS06695 387776bf017882ebbada39f8e819e7b3 129 Pfam PF00578 AhpC/TSA family 2 76 6.6E-15 T 25-04-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CLFO_RS06695 387776bf017882ebbada39f8e819e7b3 129 Gene3D G3DSA:3.40.30.10 2 119 1.8E-35 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS06695 387776bf017882ebbada39f8e819e7b3 129 SUPERFAMILY SSF52833 2 128 2.3E-32 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 SUPERFAMILY SSF52540 109 322 1.09E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 444 34.139 T 25-04-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 SMART SM00760 353 422 3.5E-39 T 25-04-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 442 1.0E-180 T 25-04-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 Gene3D G3DSA:3.40.50.300 94 273 2.1E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 SUPERFAMILY SSF48295 342 444 1.94E-35 T 25-04-2017 IPR010921 Trp repressor/replication initiator GO:0043565 CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 ProSitePatterns PS01008 DnaA protein signature. 403 422 - T 25-04-2017 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 356 422 1.1E-30 T 25-04-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 Gene3D G3DSA:1.10.1750.10 344 444 1.4E-39 T 25-04-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 241 268 2.4E-52 T 25-04-2017 IPR020591 Chromosomal replication control, initiator DnaA-like CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 403 422 2.4E-52 T 25-04-2017 IPR020591 Chromosomal replication control, initiator DnaA-like CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 207 221 2.4E-52 T 25-04-2017 IPR020591 Chromosomal replication control, initiator DnaA-like CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 143 163 2.4E-52 T 25-04-2017 IPR020591 Chromosomal replication control, initiator DnaA-like CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 175 189 2.4E-52 T 25-04-2017 IPR020591 Chromosomal replication control, initiator DnaA-like CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 Pfam PF11638 DnaA N-terminal domain 7 68 2.9E-15 T 25-04-2017 IPR024633 DnaA N-terminal domain CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 Pfam PF00308 Bacterial dnaA protein 110 327 2.4E-104 T 25-04-2017 IPR013317 Chromosomal replication initiator protein DnaA CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 Gene3D G3DSA:1.10.8.60 276 343 6.7E-32 T 25-04-2017 CLFO_RS00005 f23a4632c367a75bdf2a45c4b35bc24a 446 SMART SM00382 142 270 3.3E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 166 194 - T 25-04-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 Pfam PF00106 short chain dehydrogenase 12 220 2.3E-40 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 167 1.4E-7 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.4E-7 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 198 1.4E-7 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 SUPERFAMILY SSF51735 11 279 1.68E-59 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 5.5E-27 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 169 5.5E-27 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 198 5.5E-27 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 217 5.5E-27 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 5.5E-27 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 240 260 5.5E-27 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12860 91730d2db0681b432acc83b7af83eb35 283 Gene3D G3DSA:3.40.50.720 7 279 4.1E-62 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS12960 adbd834c0439af8203dd263862903cdd 193 Gene3D G3DSA:2.60.60.30 18 186 5.1E-66 T 25-04-2017 CLFO_RS12960 adbd834c0439af8203dd263862903cdd 193 Pfam PF02342 TerD domain 1 188 1.6E-82 T 25-04-2017 IPR003325 TerD domain GO:0006950 CLFO_RS11925 7dda0940f6fc162e4eb435328242e8e6 238 Gene3D G3DSA:3.40.50.300 3 224 3.8E-69 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11925 7dda0940f6fc162e4eb435328242e8e6 238 SMART SM00382 34 222 1.7E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS11925 7dda0940f6fc162e4eb435328242e8e6 238 Pfam PF00005 ABC transporter 25 173 9.1E-34 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS11925 7dda0940f6fc162e4eb435328242e8e6 238 SUPERFAMILY SSF52540 5 225 5.84E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05865 b6dee454d8b8ac7619825668d2b5dbc5 342 Pfam PF00994 Probable molybdopterin binding domain 173 289 2.1E-18 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS05865 b6dee454d8b8ac7619825668d2b5dbc5 342 SMART SM00852 173 305 5.0E-17 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS05865 b6dee454d8b8ac7619825668d2b5dbc5 342 SUPERFAMILY SSF53218 169 310 3.53E-29 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS05865 b6dee454d8b8ac7619825668d2b5dbc5 342 Gene3D G3DSA:3.40.980.10 160 305 2.9E-27 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS04380 49ef76e8059d5834c4700f20b19e5b05 418 PIRSF PIRSF004911 34 415 1.2E-137 T 25-04-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CLFO_RS04380 49ef76e8059d5834c4700f20b19e5b05 418 Pfam PF12544 Lysine-2,3-aminomutase 352 409 2.1E-17 T 25-04-2017 IPR025895 Lysine-2,3-aminomutase, C-terminal domain CLFO_RS04380 49ef76e8059d5834c4700f20b19e5b05 418 Pfam PF04055 Radical SAM superfamily 159 306 1.7E-10 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS04380 49ef76e8059d5834c4700f20b19e5b05 418 Gene3D G3DSA:3.20.20.70 150 406 6.5E-19 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS04380 49ef76e8059d5834c4700f20b19e5b05 418 SUPERFAMILY SSF102114 149 387 7.85E-30 T 25-04-2017 CLFO_RS04380 49ef76e8059d5834c4700f20b19e5b05 418 TIGRFAM TIGR00238 TIGR00238: KamA family protein 46 370 8.5E-105 T 25-04-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CLFO_RS04380 49ef76e8059d5834c4700f20b19e5b05 418 TIGRFAM TIGR04368 Glu_2_3_NH3_mut: glutamate 2,3-aminomutase 4 407 4.8E-211 T 25-04-2017 IPR030801 Glutamate 2,3-aminomutase GO:0016869 CLFO_RS03545 b2508912933945b2420d60013eb05781 380 Gene3D G3DSA:3.40.50.920 270 364 8.4E-19 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS03545 b2508912933945b2420d60013eb05781 380 SUPERFAMILY SSF52922 271 375 4.84E-21 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS03545 b2508912933945b2420d60013eb05781 380 SUPERFAMILY SSF52518 18 266 9.92E-50 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS03545 b2508912933945b2420d60013eb05781 380 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 275 358 1.2E-19 T 25-04-2017 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CLFO_RS03545 b2508912933945b2420d60013eb05781 380 Gene3D G3DSA:3.40.50.970 18 262 4.3E-47 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS03545 b2508912933945b2420d60013eb05781 380 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 32 254 7.5E-58 T 25-04-2017 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CLFO_RS17900 e3015f3b222e410b3fd90de908cc9171 209 Gene3D G3DSA:2.50.20.10 19 193 7.9E-24 T 25-04-2017 CLFO_RS17900 e3015f3b222e410b3fd90de908cc9171 209 SUPERFAMILY SSF89392 29 209 7.06E-20 T 25-04-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX CLFO_RS17900 e3015f3b222e410b3fd90de908cc9171 209 Pfam PF17131 Outer membrane lipoprotein-sorting protein 73 188 4.7E-10 T 25-04-2017 IPR033399 Putative outer membrane lipoprotein-sorting protein CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Gene3D G3DSA:3.40.50.20 536 655 1.0E-54 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Gene3D G3DSA:3.30.470.20 202 397 7.5E-62 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Gene3D G3DSA:3.30.470.20 739 930 8.7E-64 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 831 838 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 SUPERFAMILY SSF56059 128 398 1.03E-92 T 25-04-2017 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 SUPERFAMILY SSF48108 393 545 5.75E-36 T 25-04-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 SUPERFAMILY SSF52440 550 668 2.59E-50 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 SMART SM01096 420 540 6.0E-39 T 25-04-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 540 4.4E-26 T 25-04-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 SMART SM00851 951 1037 3.1E-30 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 SUPERFAMILY SSF52440 1 127 2.3E-47 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Gene3D G3DSA:1.10.1030.10 398 535 2.2E-32 T 25-04-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1058 12.013 T 25-04-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 2.1E-59 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.1E-59 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.1E-59 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.1E-59 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 377 395 2.1E-59 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.1E-59 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.1E-59 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Gene3D G3DSA:3.40.50.20 4 108 1.7E-40 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1046 0.0 T 25-04-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Pfam PF02142 MGS-like domain 952 1037 6.0E-20 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Gene3D G3DSA:3.30.1490.20 142 201 1.3E-21 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Gene3D G3DSA:3.30.1490.20 679 738 7.6E-26 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 SUPERFAMILY SSF52335 934 1069 2.09E-35 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 SUPERFAMILY SSF56059 666 929 2.47E-93 T 25-04-2017 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 860 8.3E-36 T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 5.3E-57 T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS06710 f96423aa3b284cad9a40ef1242709148 1075 Gene3D G3DSA:3.40.50.1380 933 1070 6.4E-40 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS00345 65d3809750a01a3c61e9426943ea57ff 346 SUPERFAMILY SSF159664 215 342 4.84E-35 T 25-04-2017 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CLFO_RS00345 65d3809750a01a3c61e9426943ea57ff 346 Pfam PF11760 Cobalamin synthesis G N-terminal 51 131 9.5E-35 T 25-04-2017 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CLFO_RS00345 65d3809750a01a3c61e9426943ea57ff 346 Gene3D G3DSA:3.30.420.180 214 343 3.4E-40 T 25-04-2017 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CLFO_RS00345 65d3809750a01a3c61e9426943ea57ff 346 SUPERFAMILY SSF159672 1 229 1.02E-59 T 25-04-2017 CLFO_RS00345 65d3809750a01a3c61e9426943ea57ff 346 Pfam PF01890 Cobalamin synthesis G C-terminus 222 340 2.6E-31 T 25-04-2017 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CLFO_RS00345 65d3809750a01a3c61e9426943ea57ff 346 Pfam PF11761 Cobalamin biosynthesis central region 136 217 3.1E-7 T 25-04-2017 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CLFO_RS08315 8b7f63750f2bdf686ade2d8b9ccb55ba 384 Gene3D G3DSA:1.20.1090.10 184 384 3.0E-56 T 25-04-2017 CLFO_RS08315 8b7f63750f2bdf686ade2d8b9ccb55ba 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 375 3.5E-111 T 25-04-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLFO_RS08315 8b7f63750f2bdf686ade2d8b9ccb55ba 384 SUPERFAMILY SSF56796 8 382 1.05E-111 T 25-04-2017 CLFO_RS08315 8b7f63750f2bdf686ade2d8b9ccb55ba 384 Gene3D G3DSA:3.40.50.1970 7 183 3.9E-59 T 25-04-2017 CLFO_RS08315 8b7f63750f2bdf686ade2d8b9ccb55ba 384 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 25-04-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLFO_RS17365 14b08011bba8aa14212c5ee29f97cdfe 729 SUPERFAMILY SSF51261 540 722 2.77E-39 T 25-04-2017 IPR011055 Duplicated hybrid motif CLFO_RS17365 14b08011bba8aa14212c5ee29f97cdfe 729 Gene3D G3DSA:2.70.70.10 605 723 1.2E-35 T 25-04-2017 CLFO_RS17365 14b08011bba8aa14212c5ee29f97cdfe 729 Pfam PF01551 Peptidase family M23 622 719 6.1E-26 T 25-04-2017 IPR016047 Peptidase M23 CLFO_RS15115 77a7eb486474305a51ae9cce5b83a3b0 647 Pfam PF02517 CAAX protease self-immunity 516 602 8.4E-21 T 25-04-2017 IPR003675 CAAX amino terminal protease GO:0016020 CLFO_RS15115 77a7eb486474305a51ae9cce5b83a3b0 647 Pfam PF12679 ABC-2 family transporter protein 8 372 2.7E-19 T 25-04-2017 IPR032688 ABC-2 family transporter protein GO:0006810 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 SMART SM00387 391 507 7.6E-38 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 4.1E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 446 4.1E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 460 4.1E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 4.1E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 Gene3D G3DSA:3.30.450.20 6 135 2.5E-20 T 25-04-2017 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 SMART SM00448 528 643 5.7E-36 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 Pfam PF01627 Hpt domain 686 751 1.8E-6 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 SUPERFAMILY SSF55874 333 503 9.69E-45 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 Pfam PF00072 Response regulator receiver domain 530 643 1.2E-26 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 SUPERFAMILY SSF47226 626 760 2.75E-16 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 138 266 1.7E-18 T 25-04-2017 IPR000014 PAS domain CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 137 1.1E-16 T 25-04-2017 IPR000014 PAS domain CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 SMART SM00091 12 80 5.6E-8 T 25-04-2017 IPR000014 PAS domain CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 SMART SM00091 142 214 2.5 T 25-04-2017 IPR000014 PAS domain CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 SMART SM00388 279 344 3.1E-21 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 Gene3D G3DSA:3.30.565.10 332 509 5.7E-45 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 Gene3D G3DSA:1.10.287.130 271 331 5.0E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 Pfam PF00512 His Kinase A (phospho-acceptor) domain 279 344 2.2E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 506 2.5E-29 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 Pfam PF08448 PAS fold 21 132 1.8E-15 T 25-04-2017 IPR013656 PAS fold-4 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 Gene3D G3DSA:3.30.450.20 136 257 1.6E-24 T 25-04-2017 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 Gene3D G3DSA:1.20.120.160 639 760 2.2E-13 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 Pfam PF13426 PAS domain 168 258 1.4E-11 T 25-04-2017 IPR000014 PAS domain CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 SUPERFAMILY SSF52172 529 661 4.13E-36 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 SUPERFAMILY SSF47384 265 345 3.34E-20 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 SUPERFAMILY SSF55785 127 257 2.26E-22 T 25-04-2017 IPR000014 PAS domain CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 Gene3D G3DSA:3.40.50.2300 526 638 9.6E-40 T 25-04-2017 CLFO_RS18515 4d59bda1c62e4da24c96f93c48ff2cd1 769 SUPERFAMILY SSF55785 23 139 9.18E-22 T 25-04-2017 IPR000014 PAS domain CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 SUPERFAMILY SSF82771 22 106 6.02E-26 T 25-04-2017 IPR000305 GIY-YIG nuclease superfamily CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 Hamap MF_00203 UvrABC system protein C [uvrC]. 9 626 28.759 T 25-04-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 Pfam PF02151 UvrB/uvrC motif 214 246 8.3E-11 T 25-04-2017 IPR001943 UVR domain GO:0005515 CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 Gene3D G3DSA:3.40.1440.10 22 102 9.1E-12 T 25-04-2017 IPR027299 GIY-YIG domain CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 Pfam PF01541 GIY-YIG catalytic domain 23 99 2.7E-10 T 25-04-2017 IPR000305 GIY-YIG nuclease superfamily CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 Pfam PF12826 Helix-hairpin-helix motif 580 629 2.5E-12 T 25-04-2017 CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 Gene3D G3DSA:1.10.150.20 575 628 1.3E-22 T 25-04-2017 CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 Gene3D G3DSA:4.10.860.10 192 253 1.1E-15 T 25-04-2017 IPR001943 UVR domain GO:0005515 CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 SMART SM00465 22 104 2.6E-25 T 25-04-2017 IPR000305 GIY-YIG nuclease superfamily CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 13 608 2.0E-178 T 25-04-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 SUPERFAMILY SSF46600 200 252 6.54E-12 T 25-04-2017 IPR001943 UVR domain GO:0005515 CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 395 561 1.3E-47 T 25-04-2017 IPR001162 UvrC family homology region CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 SMART SM00278 607 626 25.0 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 SMART SM00278 575 594 5.1 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS17670 2c86064f965fe531bc1ee6c4ea01020b 631 SUPERFAMILY SSF47781 536 629 6.67E-23 T 25-04-2017 IPR010994 RuvA domain 2-like CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 Gene3D G3DSA:1.10.3500.10 108 311 3.7E-87 T 25-04-2017 IPR023323 Tex-like domain CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 Gene3D G3DSA:1.10.3500.10 440 487 3.7E-87 T 25-04-2017 IPR023323 Tex-like domain CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 Gene3D G3DSA:2.40.50.140 640 720 3.5E-28 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 SUPERFAMILY SSF47781 549 629 5.34E-17 T 25-04-2017 IPR010994 RuvA domain 2-like CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 Pfam PF16921 Tex protein YqgF-like domain 316 440 3.5E-55 T 25-04-2017 IPR032639 Tex protein, YqgF-like domain CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 Pfam PF09371 Tex-like protein N-terminal domain 7 192 4.5E-67 T 25-04-2017 IPR018974 Tex-like protein, N-terminal CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 Pfam PF00575 S1 RNA binding domain 646 717 8.7E-22 T 25-04-2017 IPR003029 S1 domain GO:0003676 CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 Pfam PF12836 Helix-hairpin-helix motif 480 544 9.3E-28 T 25-04-2017 CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 SMART SM00732 315 413 2.5E-35 T 25-04-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 SUPERFAMILY SSF158832 2 310 3.27E-110 T 25-04-2017 CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 SUPERFAMILY SSF53098 311 458 2.12E-50 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 Gene3D G3DSA:1.10.10.650 2 107 1.9E-41 T 25-04-2017 IPR023319 Tex-like protein, HTH domain CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 Gene3D G3DSA:1.10.150.310 488 627 7.4E-49 T 25-04-2017 IPR023097 Tex RuvX-like domain CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 SMART SM00316 646 717 1.5E-25 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 SUPERFAMILY SSF50249 632 720 3.21E-26 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 SUPERFAMILY SSF47781 459 546 2.89E-27 T 25-04-2017 IPR010994 RuvA domain 2-like CLFO_RS01720 35e69c030fe030c90294e168c1cf515a 722 Gene3D G3DSA:3.30.420.140 316 439 1.9E-52 T 25-04-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 CLFO_RS10035 6b56d72c7c2a14ebe6d63fcfee4cd455 88 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 81 2.0E-9 T 25-04-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLFO_RS10035 6b56d72c7c2a14ebe6d63fcfee4cd455 88 SUPERFAMILY SSF159133 1 86 1.7E-23 T 25-04-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLFO_RS10035 6b56d72c7c2a14ebe6d63fcfee4cd455 88 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 81 8.1E-26 T 25-04-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLFO_RS10035 6b56d72c7c2a14ebe6d63fcfee4cd455 88 Gene3D G3DSA:2.40.50.220 1 86 8.1E-27 T 25-04-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLFO_RS00960 902956fa191a1700bd6094701bab3c54 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 144 7.9E-59 T 25-04-2017 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 CLFO_RS00960 902956fa191a1700bd6094701bab3c54 149 Gene3D G3DSA:3.40.1400.10 1 147 9.1E-68 T 25-04-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLFO_RS00960 902956fa191a1700bd6094701bab3c54 149 Pfam PF02502 Ribose/Galactose Isomerase 3 140 2.8E-58 T 25-04-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLFO_RS00960 902956fa191a1700bd6094701bab3c54 149 SUPERFAMILY SSF89623 1 144 6.67E-60 T 25-04-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLFO_RS00960 902956fa191a1700bd6094701bab3c54 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 146 1.9E-60 T 25-04-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLFO_RS00960 902956fa191a1700bd6094701bab3c54 149 PIRSF PIRSF005384 1 147 2.9E-61 T 25-04-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLFO_RS02455 64d9d130050353e2923a28061d1a9f3a 150 Pfam PF01750 Hydrogenase maturation protease 20 140 1.3E-7 T 25-04-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CLFO_RS02455 64d9d130050353e2923a28061d1a9f3a 150 Gene3D G3DSA:3.40.50.1450 5 144 9.6E-23 T 25-04-2017 IPR023430 Peptidase HybD-like domain CLFO_RS02455 64d9d130050353e2923a28061d1a9f3a 150 PRINTS PR00446 Hydrogen uptake protein signature 15 26 1.3E-5 T 25-04-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CLFO_RS02455 64d9d130050353e2923a28061d1a9f3a 150 PRINTS PR00446 Hydrogen uptake protein signature 3 15 1.3E-5 T 25-04-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CLFO_RS02455 64d9d130050353e2923a28061d1a9f3a 150 PRINTS PR00446 Hydrogen uptake protein signature 55 65 1.3E-5 T 25-04-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CLFO_RS02455 64d9d130050353e2923a28061d1a9f3a 150 SUPERFAMILY SSF53163 3 143 1.73E-25 T 25-04-2017 IPR023430 Peptidase HybD-like domain CLFO_RS02455 64d9d130050353e2923a28061d1a9f3a 150 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 6 141 1.4E-25 T 25-04-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 SUPERFAMILY SSF52540 531 792 1.82E-110 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 SUPERFAMILY SSF52540 837 863 1.82E-110 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 SUPERFAMILY SSF52540 3 192 1.82E-110 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 SUPERFAMILY SSF52540 333 479 1.82E-110 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 1 1191 19.148 T 25-04-2017 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 Gene3D G3DSA:1.10.486.10 597 741 1.8E-23 T 25-04-2017 CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 SUPERFAMILY SSF52980 984 1185 4.99E-35 T 25-04-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 439 2.5E-75 T 25-04-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1019 1176 1.4E-10 T 25-04-2017 CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 Pfam PF13361 UvrD-like helicase C-terminal domain 450 860 8.5E-30 T 25-04-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 Gene3D G3DSA:3.90.320.10 972 1187 7.3E-30 T 25-04-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 Gene3D G3DSA:3.40.50.300 343 440 8.7E-71 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 Gene3D G3DSA:3.40.50.300 2 160 8.7E-71 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 3 1189 0.0 T 25-04-2017 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 Gene3D G3DSA:3.40.50.300 454 590 9.8E-75 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17995 bd46709738fd4a6f190e6ba2932161f7 1191 Gene3D G3DSA:3.40.50.300 756 913 9.8E-75 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 PIRSF PIRSF000124 1 388 3.4E-138 T 25-04-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 Gene3D G3DSA:3.40.50.720 285 388 2.0E-48 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 SUPERFAMILY SSF51735 1 194 4.61E-51 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 Gene3D G3DSA:3.40.50.720 1 197 1.1E-69 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 1.7E-33 T 25-04-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 Gene3D G3DSA:1.10.1040.10 198 284 1.6E-34 T 25-04-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 SUPERFAMILY SSF48179 191 287 5.61E-30 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.4E-25 T 25-04-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 SUPERFAMILY SSF52413 283 387 1.83E-28 T 25-04-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 1.4E-9 T 25-04-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 PIRSF PIRSF500134 1 344 1.5E-122 T 25-04-2017 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 SMART SM00984 300 387 3.5E-12 T 25-04-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS01180 111f43de6e14ffe546c82c1ffa437da4 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 4.2E-105 T 25-04-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CLFO_RS07170 c6f287345bb0b857e2a5259b4b40b1c9 277 SMART SM00481 2 84 7.7E-10 T 25-04-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLFO_RS07170 c6f287345bb0b857e2a5259b4b40b1c9 277 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 3 240 1.2E-55 T 25-04-2017 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 CLFO_RS07170 c6f287345bb0b857e2a5259b4b40b1c9 277 Gene3D G3DSA:3.20.20.140 1 261 8.4E-40 T 25-04-2017 CLFO_RS07170 c6f287345bb0b857e2a5259b4b40b1c9 277 SUPERFAMILY SSF89550 1 264 3.53E-52 T 25-04-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLFO_RS07170 c6f287345bb0b857e2a5259b4b40b1c9 277 Pfam PF02811 PHP domain 3 193 1.8E-16 T 25-04-2017 IPR004013 PHP domain GO:0003824 CLFO_RS16320 8792bc8f8507bab898917dc640ffd4cf 285 Gene3D G3DSA:3.40.50.300 1 61 1.4E-41 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16320 8792bc8f8507bab898917dc640ffd4cf 285 Gene3D G3DSA:3.40.50.300 114 269 1.4E-41 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16320 8792bc8f8507bab898917dc640ffd4cf 285 SUPERFAMILY SSF54862 55 115 1.24E-16 T 25-04-2017 CLFO_RS16320 8792bc8f8507bab898917dc640ffd4cf 285 Pfam PF13187 4Fe-4S dicluster domain 66 109 1.6E-6 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS16320 8792bc8f8507bab898917dc640ffd4cf 285 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 226 8.9E-22 T 25-04-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLFO_RS16320 8792bc8f8507bab898917dc640ffd4cf 285 SUPERFAMILY SSF52540 1 59 6.24E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16320 8792bc8f8507bab898917dc640ffd4cf 285 SUPERFAMILY SSF52540 120 273 6.24E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16320 8792bc8f8507bab898917dc640ffd4cf 285 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 95 106 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS16320 8792bc8f8507bab898917dc640ffd4cf 285 Gene3D G3DSA:3.30.70.20 62 113 3.7E-13 T 25-04-2017 CLFO_RS20700 9dbda9135a549dbea05c7c2a22d778b2 251 SUPERFAMILY SSF56219 1 249 8.64E-80 T 25-04-2017 IPR005135 Endonuclease/exonuclease/phosphatase CLFO_RS20700 9dbda9135a549dbea05c7c2a22d778b2 251 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 242 3.7E-29 T 25-04-2017 IPR005135 Endonuclease/exonuclease/phosphatase CLFO_RS20700 9dbda9135a549dbea05c7c2a22d778b2 251 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 249 1.1E-98 T 25-04-2017 CLFO_RS20700 9dbda9135a549dbea05c7c2a22d778b2 251 Gene3D G3DSA:3.60.10.10 1 249 2.8E-103 T 25-04-2017 IPR005135 Endonuclease/exonuclease/phosphatase CLFO_RS20700 9dbda9135a549dbea05c7c2a22d778b2 251 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 249 6.4E-100 T 25-04-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CLFO_RS20700 9dbda9135a549dbea05c7c2a22d778b2 251 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 25-04-2017 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CLFO_RS16655 b73bb09e03ca4dc13d06ad972dc833fa 85 Gene3D G3DSA:3.30.1490.20 42 82 1.1E-7 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS16655 b73bb09e03ca4dc13d06ad972dc833fa 85 SUPERFAMILY SSF56059 3 81 4.0E-7 T 25-04-2017 CLFO_RS16655 b73bb09e03ca4dc13d06ad972dc833fa 85 Gene3D G3DSA:3.30.1490.20 4 41 1.2E-4 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS16655 b73bb09e03ca4dc13d06ad972dc833fa 85 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 40 82 3.3E-7 T 25-04-2017 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CLFO_RS03305 2e4db99eec760d2e9833f973d1c9367f 331 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 24 - T 25-04-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS03305 2e4db99eec760d2e9833f973d1c9367f 331 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 330 1.5E-111 T 25-04-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CLFO_RS03305 2e4db99eec760d2e9833f973d1c9367f 331 Gene3D G3DSA:3.40.50.620 4 210 2.7E-90 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS03305 2e4db99eec760d2e9833f973d1c9367f 331 SUPERFAMILY SSF52374 8 330 1.53E-97 T 25-04-2017 CLFO_RS03305 2e4db99eec760d2e9833f973d1c9367f 331 Gene3D G3DSA:1.10.240.10 211 325 8.0E-19 T 25-04-2017 CLFO_RS03305 2e4db99eec760d2e9833f973d1c9367f 331 Pfam PF00579 tRNA synthetases class I (W and Y) 5 285 1.7E-78 T 25-04-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS03305 2e4db99eec760d2e9833f973d1c9367f 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 2.6E-27 T 25-04-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CLFO_RS03305 2e4db99eec760d2e9833f973d1c9367f 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 2.6E-27 T 25-04-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CLFO_RS03305 2e4db99eec760d2e9833f973d1c9367f 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 19 35 2.6E-27 T 25-04-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CLFO_RS03305 2e4db99eec760d2e9833f973d1c9367f 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 2.6E-27 T 25-04-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CLFO_RS03305 2e4db99eec760d2e9833f973d1c9367f 331 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 6 331 40.541 T 25-04-2017 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CLFO_RS00085 4385ba4f5845866194e2a3429c3e2aa0 51 Pfam PF00376 MerR family regulatory protein 6 41 1.9E-12 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS00085 4385ba4f5845866194e2a3429c3e2aa0 51 Gene3D G3DSA:1.10.1660.10 3 49 1.6E-11 T 25-04-2017 CLFO_RS00085 4385ba4f5845866194e2a3429c3e2aa0 51 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 5 50 2.7E-9 T 25-04-2017 IPR010093 SinI-like, DNA-binding domain GO:0003677 CLFO_RS00085 4385ba4f5845866194e2a3429c3e2aa0 51 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 1.4E-6 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS00085 4385ba4f5845866194e2a3429c3e2aa0 51 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 51 1.4E-6 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS00085 4385ba4f5845866194e2a3429c3e2aa0 51 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 1.4E-6 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS00085 4385ba4f5845866194e2a3429c3e2aa0 51 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS00085 4385ba4f5845866194e2a3429c3e2aa0 51 SUPERFAMILY SSF46955 4 50 1.42E-11 T 25-04-2017 IPR009061 Putative DNA-binding domain CLFO_RS06865 90952787ff32c6f71358bd7dc9cd614b 1521 SUPERFAMILY SSF56235 23 445 1.97E-156 T 25-04-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CLFO_RS06865 90952787ff32c6f71358bd7dc9cd614b 1521 SUPERFAMILY SSF69336 1233 1499 1.7E-94 T 25-04-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CLFO_RS06865 90952787ff32c6f71358bd7dc9cd614b 1521 Gene3D G3DSA:3.20.20.70 858 1220 2.9E-178 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS06865 90952787ff32c6f71358bd7dc9cd614b 1521 Gene3D G3DSA:3.20.20.70 456 805 4.5E-110 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS06865 90952787ff32c6f71358bd7dc9cd614b 1521 Pfam PF00310 Glutamine amidotransferases class-II 23 443 4.6E-188 T 25-04-2017 IPR017932 Glutamine amidotransferase type 2 domain CLFO_RS06865 90952787ff32c6f71358bd7dc9cd614b 1521 Pfam PF01493 GXGXG motif 1264 1450 3.1E-85 T 25-04-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CLFO_RS06865 90952787ff32c6f71358bd7dc9cd614b 1521 Pfam PF04898 Glutamate synthase central domain 472 755 4.2E-116 T 25-04-2017 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CLFO_RS06865 90952787ff32c6f71358bd7dc9cd614b 1521 Gene3D G3DSA:3.60.20.10 23 455 1.5E-189 T 25-04-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CLFO_RS06865 90952787ff32c6f71358bd7dc9cd614b 1521 SUPERFAMILY SSF51395 462 1220 2.44E-263 T 25-04-2017 CLFO_RS06865 90952787ff32c6f71358bd7dc9cd614b 1521 Pfam PF01645 Conserved region in glutamate synthase 817 1184 7.6E-157 T 25-04-2017 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CLFO_RS06865 90952787ff32c6f71358bd7dc9cd614b 1521 Gene3D G3DSA:2.160.20.60 1238 1506 3.1E-102 T 25-04-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CLFO_RS05650 eb8fb1767f73051935d88497d46f5787 123 Pfam PF01597 Glycine cleavage H-protein 6 122 9.8E-44 T 25-04-2017 IPR002930 Glycine cleavage system H-protein CLFO_RS05650 eb8fb1767f73051935d88497d46f5787 123 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 3 123 29.031 T 25-04-2017 IPR002930 Glycine cleavage system H-protein CLFO_RS05650 eb8fb1767f73051935d88497d46f5787 123 Gene3D G3DSA:2.40.50.100 5 122 2.3E-47 T 25-04-2017 CLFO_RS05650 eb8fb1767f73051935d88497d46f5787 123 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 122 6.3E-45 T 25-04-2017 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CLFO_RS05650 eb8fb1767f73051935d88497d46f5787 123 SUPERFAMILY SSF51230 2 122 2.99E-41 T 25-04-2017 IPR011053 Single hybrid motif CLFO_RS08575 7887f77b35f35d2c7b15f303882e822b 342 Pfam PF01699 Sodium/calcium exchanger protein 186 336 7.1E-22 T 25-04-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CLFO_RS08575 7887f77b35f35d2c7b15f303882e822b 342 Pfam PF01699 Sodium/calcium exchanger protein 16 155 3.1E-22 T 25-04-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CLFO_RS08575 7887f77b35f35d2c7b15f303882e822b 342 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 15 333 7.9E-60 T 25-04-2017 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 CLFO_RS14775 bc386af0bb4a1bbdb9a1e84e8012fbe1 170 Gene3D G3DSA:3.40.630.30 1 161 2.1E-42 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS14775 bc386af0bb4a1bbdb9a1e84e8012fbe1 170 SUPERFAMILY SSF55729 1 161 6.98E-33 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS14775 bc386af0bb4a1bbdb9a1e84e8012fbe1 170 Pfam PF13420 Acetyltransferase (GNAT) domain 2 153 8.9E-27 T 25-04-2017 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 SUPERFAMILY SSF51905 2 309 3.28E-52 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 2.4E-69 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 2.4E-69 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 2.4E-69 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 2.4E-69 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 2.4E-69 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 2.4E-69 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 2.4E-69 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 2.4E-69 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 2.4E-69 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 298 1.1E-51 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 Gene3D G3DSA:3.50.50.60 122 231 7.7E-34 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 5 309 2.5E-113 T 25-04-2017 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.8E-33 T 25-04-2017 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.8E-33 T 25-04-2017 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.8E-33 T 25-04-2017 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.8E-33 T 25-04-2017 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.8E-33 T 25-04-2017 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 Gene3D G3DSA:3.50.50.60 2 121 1.1E-34 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 25-04-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CLFO_RS14355 e4340a7a9ba2bc268632a661cbd671ed 315 Gene3D G3DSA:3.50.50.60 244 311 5.4E-13 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18795 b41279350c7e6e4d2b6cd4ab3e3d9f8b 311 Pfam PF06527 TniQ 4 159 4.1E-6 T 25-04-2017 IPR009492 TniQ CLFO_RS18795 b41279350c7e6e4d2b6cd4ab3e3d9f8b 311 Pfam PF15978 Tn7-like transposition protein D 207 310 1.4E-18 T 25-04-2017 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl CLFO_RS14095 1171945fc8416038feb60417c8df48ad 272 Pfam PF02110 Hydroxyethylthiazole kinase family 11 259 5.9E-86 T 25-04-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS14095 1171945fc8416038feb60417c8df48ad 272 PIRSF PIRSF000513 5 271 6.9E-92 T 25-04-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS14095 1171945fc8416038feb60417c8df48ad 272 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 11 262 1.8E-89 T 25-04-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS14095 1171945fc8416038feb60417c8df48ad 272 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 13 263 32.492 T 25-04-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS14095 1171945fc8416038feb60417c8df48ad 272 Gene3D G3DSA:3.40.1190.20 6 270 1.0E-89 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS14095 1171945fc8416038feb60417c8df48ad 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 120 134 1.1E-38 T 25-04-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS14095 1171945fc8416038feb60417c8df48ad 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 63 71 1.1E-38 T 25-04-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS14095 1171945fc8416038feb60417c8df48ad 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 89 106 1.1E-38 T 25-04-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS14095 1171945fc8416038feb60417c8df48ad 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 165 182 1.1E-38 T 25-04-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS14095 1171945fc8416038feb60417c8df48ad 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 32 53 1.1E-38 T 25-04-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS14095 1171945fc8416038feb60417c8df48ad 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 19 26 1.1E-38 T 25-04-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS14095 1171945fc8416038feb60417c8df48ad 272 SUPERFAMILY SSF53613 8 269 9.67E-59 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS16040 5fce0e0d36e6a9d6982a7d404ad15153 344 Gene3D G3DSA:3.40.190.10 1 119 3.0E-4 T 25-04-2017 CLFO_RS16040 5fce0e0d36e6a9d6982a7d404ad15153 344 Pfam PF09084 NMT1/THI5 like 78 279 1.9E-10 T 25-04-2017 IPR015168 SsuA/THI5-like CLFO_RS16040 5fce0e0d36e6a9d6982a7d404ad15153 344 PIRSF PIRSF027386 1 344 1.5E-122 T 25-04-2017 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type CLFO_RS16040 5fce0e0d36e6a9d6982a7d404ad15153 344 Gene3D G3DSA:3.40.190.10 138 264 4.0E-12 T 25-04-2017 CLFO_RS16040 5fce0e0d36e6a9d6982a7d404ad15153 344 SUPERFAMILY SSF53850 54 340 1.21E-28 T 25-04-2017 CLFO_RS15310 9fc3c0809d89558e156dbd9676b6d481 382 Pfam PF12683 Protein of unknown function (DUF3798) 42 312 1.0E-108 T 25-04-2017 IPR024258 Protein of unknown function DUF3798 CLFO_RS02390 d024624d93cabce46e115678a032f60c 211 Pfam PF01725 Ham1 family 14 202 1.7E-51 T 25-04-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 CLFO_RS02390 d024624d93cabce46e115678a032f60c 211 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 14 206 46.05 T 25-04-2017 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CLFO_RS02390 d024624d93cabce46e115678a032f60c 211 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 14 204 9.0E-59 T 25-04-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 CLFO_RS02390 d024624d93cabce46e115678a032f60c 211 Gene3D G3DSA:3.90.950.10 5 205 4.7E-71 T 25-04-2017 IPR029001 Inosine triphosphate pyrophosphatase-like CLFO_RS02390 d024624d93cabce46e115678a032f60c 211 SUPERFAMILY SSF52972 13 205 1.81E-62 T 25-04-2017 IPR029001 Inosine triphosphate pyrophosphatase-like CLFO_RS15955 9fa791b19928181e9610d4af0bd6f1a1 324 SUPERFAMILY SSF53613 1 313 9.98E-84 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS15955 9fa791b19928181e9610d4af0bd6f1a1 324 Gene3D G3DSA:3.40.1190.20 1 318 9.4E-93 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS15955 9fa791b19928181e9610d4af0bd6f1a1 324 Pfam PF00294 pfkB family carbohydrate kinase 2 307 4.9E-68 T 25-04-2017 IPR011611 Carbohydrate kinase PfkB CLFO_RS15955 9fa791b19928181e9610d4af0bd6f1a1 324 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 25-04-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLFO_RS19485 fc8eba8f0c258f75d2d7b88dda13eadd 205 Pfam PF08359 YsiA-like protein, C-terminal region 137 195 1.6E-4 T 25-04-2017 IPR013570 Transcription regulator YsiA, C-terminal CLFO_RS19485 fc8eba8f0c258f75d2d7b88dda13eadd 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 67 - T 25-04-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLFO_RS19485 fc8eba8f0c258f75d2d7b88dda13eadd 205 Gene3D G3DSA:1.10.357.10 12 195 6.6E-31 T 25-04-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLFO_RS19485 fc8eba8f0c258f75d2d7b88dda13eadd 205 SUPERFAMILY SSF48498 93 198 2.04E-12 T 25-04-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLFO_RS19485 fc8eba8f0c258f75d2d7b88dda13eadd 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 68 8.5E-15 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS19485 fc8eba8f0c258f75d2d7b88dda13eadd 205 SUPERFAMILY SSF46689 11 85 1.12E-16 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS19485 fc8eba8f0c258f75d2d7b88dda13eadd 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 3.4E-9 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS19485 fc8eba8f0c258f75d2d7b88dda13eadd 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 3.4E-9 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS13495 738081819dd3336af512518a0e2997aa 243 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 148 176 5.3E-22 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13495 738081819dd3336af512518a0e2997aa 243 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 79 97 5.3E-22 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13495 738081819dd3336af512518a0e2997aa 243 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 97 123 5.3E-22 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13495 738081819dd3336af512518a0e2997aa 243 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 5.3E-22 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13495 738081819dd3336af512518a0e2997aa 243 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 236 15.901 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13495 738081819dd3336af512518a0e2997aa 243 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 215 2.1E-50 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13495 738081819dd3336af512518a0e2997aa 243 ProSitePatterns PS01218 TatC family signature. 148 167 - T 25-04-2017 IPR019820 Sec-independent periplasmic protein translocase, conserved site CLFO_RS13495 738081819dd3336af512518a0e2997aa 243 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 220 8.3E-47 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS04170 fcd885d14e3733925f6aecf478a2e758 269 SUPERFAMILY SSF158430 6 123 7.33E-33 T 25-04-2017 CLFO_RS04170 fcd885d14e3733925f6aecf478a2e758 269 Pfam PF11155 Domain of unknown function (DUF2935) 10 119 1.4E-25 T 25-04-2017 IPR021328 Protein of unknown function DUF2935 CLFO_RS04170 fcd885d14e3733925f6aecf478a2e758 269 Pfam PF11155 Domain of unknown function (DUF2935) 132 249 2.4E-27 T 25-04-2017 IPR021328 Protein of unknown function DUF2935 CLFO_RS04170 fcd885d14e3733925f6aecf478a2e758 269 SUPERFAMILY SSF158430 131 262 4.84E-41 T 25-04-2017 CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 PIRSF PIRSF039072 2 464 6.5E-265 T 25-04-2017 CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 346 3.8E-67 T 25-04-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 25-04-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 SUPERFAMILY SSF52540 80 352 8.19E-94 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 Gene3D G3DSA:2.40.10.170 3 78 1.3E-32 T 25-04-2017 CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 SMART SM00382 145 331 1.7E-7 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 4 464 58.737 T 25-04-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 Gene3D G3DSA:1.10.1140.10 349 463 1.4E-53 T 25-04-2017 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 6 463 2.8E-260 T 25-04-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 76 5.3E-23 T 25-04-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 Gene3D G3DSA:3.40.50.300 80 348 2.1E-113 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 SUPERFAMILY SSF47917 349 463 1.54E-52 T 25-04-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS01030 1eb5981da9deb5cc8eeb425e5cac5699 465 SUPERFAMILY SSF50615 3 78 1.07E-26 T 25-04-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 Pfam PF00694 Aconitase C-terminal domain 521 572 3.6E-22 T 25-04-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 Gene3D G3DSA:3.30.499.10 270 457 8.5E-56 T 25-04-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 5 637 3.4E-264 T 25-04-2017 IPR006250 Aconitase, putative CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 SUPERFAMILY SSF53732 1 418 3.01E-148 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 SUPERFAMILY SSF52016 441 637 4.12E-50 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 ProSitePatterns PS01244 Aconitase family signature 2. 349 362 - T 25-04-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 PRINTS PR00415 Aconitase family signature 90 98 6.1E-26 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 PRINTS PR00415 Aconitase family signature 124 139 6.1E-26 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 PRINTS PR00415 Aconitase family signature 110 123 6.1E-26 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 PRINTS PR00415 Aconitase family signature 186 199 6.1E-26 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 PRINTS PR00415 Aconitase family signature 200 213 6.1E-26 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 PRINTS PR00415 Aconitase family signature 349 362 6.1E-26 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 Pfam PF00330 Aconitase family (aconitate hydratase) 8 407 5.7E-112 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 ProSitePatterns PS00450 Aconitase family signature 1. 289 305 - T 25-04-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 Gene3D G3DSA:3.40.1060.10 157 262 3.8E-39 T 25-04-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 Gene3D G3DSA:3.30.499.10 2 156 2.7E-47 T 25-04-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02850 0c7a3f91c655bbdf38ad11ebbb3b9208 641 Gene3D G3DSA:3.20.19.10 458 638 3.2E-40 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 Gene3D G3DSA:3.40.50.20 1 129 1.8E-52 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 Gene3D G3DSA:3.30.470.20 203 445 3.2E-103 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.0E-46 T 25-04-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 SUPERFAMILY SSF52440 1 113 9.35E-49 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 1.8E-80 T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 SUPERFAMILY SSF51246 331 444 3.14E-46 T 25-04-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 Gene3D G3DSA:3.30.1490.20 130 202 5.4E-30 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 SUPERFAMILY SSF56059 83 352 3.71E-73 T 25-04-2017 CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 2.1E-42 T 25-04-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 SMART SM00878 336 442 3.3E-62 T 25-04-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS12075 1348b1d01023de36e79b873cbda0cc84 458 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 4.8E-225 T 25-04-2017 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CLFO_RS15615 3e836a02ac3f0c4b8bf767b294b64758 575 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15615 3e836a02ac3f0c4b8bf767b294b64758 575 Gene3D G3DSA:3.40.50.300 331 560 1.1E-73 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15615 3e836a02ac3f0c4b8bf767b294b64758 575 Pfam PF00005 ABC transporter 349 496 3.0E-31 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15615 3e836a02ac3f0c4b8bf767b294b64758 575 Gene3D G3DSA:1.20.1560.10 3 315 4.2E-68 T 25-04-2017 CLFO_RS15615 3e836a02ac3f0c4b8bf767b294b64758 575 SUPERFAMILY SSF52540 327 569 2.25E-83 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15615 3e836a02ac3f0c4b8bf767b294b64758 575 Pfam PF00664 ABC transporter transmembrane region 16 286 8.7E-44 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS15615 3e836a02ac3f0c4b8bf767b294b64758 575 SMART SM00382 358 544 5.0E-17 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15615 3e836a02ac3f0c4b8bf767b294b64758 575 SUPERFAMILY SSF90123 3 319 2.22E-76 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS21400 c67dd9722f72738e5b792d1dd390e7c3 265 Gene3D G3DSA:3.90.1530.10 4 106 3.6E-35 T 25-04-2017 CLFO_RS21400 c67dd9722f72738e5b792d1dd390e7c3 265 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 5 179 2.0E-48 T 25-04-2017 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CLFO_RS21400 c67dd9722f72738e5b792d1dd390e7c3 265 SUPERFAMILY SSF109709 94 201 3.4E-30 T 25-04-2017 CLFO_RS21400 c67dd9722f72738e5b792d1dd390e7c3 265 SUPERFAMILY SSF110849 9 102 1.26E-24 T 25-04-2017 IPR003115 ParB/Sulfiredoxin CLFO_RS21400 c67dd9722f72738e5b792d1dd390e7c3 265 SMART SM00470 9 100 3.6E-26 T 25-04-2017 IPR003115 ParB/Sulfiredoxin CLFO_RS21400 c67dd9722f72738e5b792d1dd390e7c3 265 Pfam PF02195 ParB-like nuclease domain 10 99 3.0E-21 T 25-04-2017 IPR003115 ParB/Sulfiredoxin CLFO_RS21400 c67dd9722f72738e5b792d1dd390e7c3 265 Gene3D G3DSA:1.10.260.40 119 140 1.5E-4 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS00095 c5361a8bdb71df225679b9da254d5b81 172 Pfam PF08279 HTH domain 6 58 3.1E-14 T 25-04-2017 IPR013196 Helix-turn-helix, type 11 CLFO_RS00095 c5361a8bdb71df225679b9da254d5b81 172 Gene3D G3DSA:3.30.1340.20 67 171 6.9E-37 T 25-04-2017 IPR004173 3H domain GO:0036094 CLFO_RS00095 c5361a8bdb71df225679b9da254d5b81 172 PIRSF PIRSF037847 1 172 2.5E-70 T 25-04-2017 IPR026043 Transcription repressor NadR CLFO_RS00095 c5361a8bdb71df225679b9da254d5b81 172 SUPERFAMILY SSF46785 1 60 2.87E-11 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS00095 c5361a8bdb71df225679b9da254d5b81 172 SUPERFAMILY SSF75500 68 171 7.06E-32 T 25-04-2017 IPR004173 3H domain GO:0036094 CLFO_RS00095 c5361a8bdb71df225679b9da254d5b81 172 Pfam PF02829 3H domain 73 169 1.3E-32 T 25-04-2017 IPR004173 3H domain GO:0036094 CLFO_RS00095 c5361a8bdb71df225679b9da254d5b81 172 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 75 170 1.0E-30 T 25-04-2017 IPR004173 3H domain GO:0036094 CLFO_RS00095 c5361a8bdb71df225679b9da254d5b81 172 Gene3D G3DSA:1.10.10.10 1 60 1.2E-19 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18235 83ebd2b99237bd95c798aac6213e03da 491 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 2 491 3.7E-116 T 25-04-2017 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CLFO_RS18235 83ebd2b99237bd95c798aac6213e03da 491 Pfam PF02446 4-alpha-glucanotransferase 9 470 1.5E-166 T 25-04-2017 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CLFO_RS18235 83ebd2b99237bd95c798aac6213e03da 491 SUPERFAMILY SSF51445 3 490 2.74E-173 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS18235 83ebd2b99237bd95c798aac6213e03da 491 Gene3D G3DSA:3.20.20.80 2 491 1.2E-181 T 25-04-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 558 578 1.7E-7 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 541 558 1.7E-7 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 SMART SM00382 290 442 2.4E-8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 Gene3D G3DSA:1.10.10.60 523 577 2.1E-15 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 294 307 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 Pfam PF00158 Sigma-54 interaction domain 272 437 5.5E-66 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 SUPERFAMILY SSF52540 271 513 3.59E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 Gene3D G3DSA:3.40.50.300 266 443 5.0E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 484 493 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 Gene3D G3DSA:1.10.8.60 444 517 2.5E-16 T 25-04-2017 CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 SUPERFAMILY SSF46689 484 577 2.12E-12 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 357 372 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS03190 671a82e9decd6ab76cae2d1e84c26821 578 Pfam PF02954 Bacterial regulatory protein, Fis family 539 575 1.8E-13 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS11945 18573b936b573b2877ca974e3b64208e 404 Gene3D G3DSA:1.10.780.10 109 207 3.6E-13 T 25-04-2017 CLFO_RS11945 18573b936b573b2877ca974e3b64208e 404 Gene3D G3DSA:1.10.780.10 250 295 3.6E-13 T 25-04-2017 CLFO_RS11945 18573b936b573b2877ca974e3b64208e 404 PIRSF PIRSF000243 7 404 3.9E-108 T 25-04-2017 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CLFO_RS11945 18573b936b573b2877ca974e3b64208e 404 SUPERFAMILY SSF48695 39 402 4.62E-125 T 25-04-2017 IPR011031 Multihaem cytochrome CLFO_RS11945 18573b936b573b2877ca974e3b64208e 404 Pfam PF02335 Cytochrome c552 42 397 1.9E-112 T 25-04-2017 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CLFO_RS11945 18573b936b573b2877ca974e3b64208e 404 Gene3D G3DSA:1.20.140.10 296 401 1.1E-34 T 25-04-2017 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 Pfam PF04997 RNA polymerase Rpb1, domain 1 5 331 3.7E-91 T 25-04-2017 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 SMART SM00663 224 503 1.8E-184 T 25-04-2017 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 Pfam PF05000 RNA polymerase Rpb1, domain 4 664 727 1.8E-12 T 25-04-2017 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 Pfam PF04998 RNA polymerase Rpb1, domain 5 742 984 1.4E-50 T 25-04-2017 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 Pfam PF04998 RNA polymerase Rpb1, domain 5 972 1099 1.4E-17 T 25-04-2017 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 Pfam PF00623 RNA polymerase Rpb1, domain 2 380 474 4.9E-29 T 25-04-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 382 1.9E-8 T 25-04-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 9 1151 0.0 T 25-04-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 635 1.5E-24 T 25-04-2017 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 SUPERFAMILY SSF64484 5 1151 0.0 T 25-04-2017 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 Gene3D G3DSA:2.40.50.100 942 996 1.2E-9 T 25-04-2017 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 5 1160 10.361 T 25-04-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 3 633 32.835 T 25-04-2017 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 Gene3D G3DSA:2.40.40.20 338 365 3.8E-37 T 25-04-2017 CLFO_RS19740 f510387b6be0232bbcfeedba5530e102 1171 Gene3D G3DSA:2.40.40.20 406 478 3.8E-37 T 25-04-2017 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 Pfam PF03147 Ferredoxin-fold anticodon binding domain 703 796 5.7E-28 T 25-04-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 Gene3D G3DSA:3.30.56.10 160 189 6.6E-24 T 25-04-2017 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 Gene3D G3DSA:3.30.56.10 1 38 6.6E-24 T 25-04-2017 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 SMART SM00873 219 392 9.1E-88 T 25-04-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 SUPERFAMILY SSF46955 411 480 3.11E-18 T 25-04-2017 IPR009061 Putative DNA-binding domain CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 Pfam PF03483 B3/4 domain 219 390 5.0E-67 T 25-04-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 Gene3D G3DSA:3.30.930.10 496 691 7.7E-56 T 25-04-2017 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 Gene3D G3DSA:3.30.70.380 705 796 2.4E-29 T 25-04-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 Gene3D G3DSA:3.30.56.20 410 480 1.0E-24 T 25-04-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 796 2.4E-258 T 25-04-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 Pfam PF01588 Putative tRNA binding domain 45 150 1.8E-18 T 25-04-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 SMART SM00896 703 796 1.6E-38 T 25-04-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 SUPERFAMILY SSF55681 473 691 3.23E-47 T 25-04-2017 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 SUPERFAMILY SSF50249 38 198 6.28E-42 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 SUPERFAMILY SSF54991 698 796 7.72E-29 T 25-04-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 Pfam PF03484 tRNA synthetase B5 domain 413 477 1.8E-18 T 25-04-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 Gene3D G3DSA:2.40.50.140 41 158 2.6E-40 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 SMART SM00874 409 477 3.5E-25 T 25-04-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 790 42.912 T 25-04-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 SUPERFAMILY SSF56037 208 403 3.66E-69 T 25-04-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 CLFO_RS05530 5df67bc6dcb30e999a2d2ee8437bb2a7 797 Gene3D G3DSA:3.50.40.10 208 402 6.9E-82 T 25-04-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 CLFO_RS17490 84d8525473f553749eff8ba68e8eabf4 228 Gene3D G3DSA:3.40.50.280 80 216 2.5E-43 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS17490 84d8525473f553749eff8ba68e8eabf4 228 Gene3D G3DSA:1.10.1240.10 5 77 5.9E-8 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17490 84d8525473f553749eff8ba68e8eabf4 228 Pfam PF02310 B12 binding domain 95 195 5.2E-21 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS17490 84d8525473f553749eff8ba68e8eabf4 228 SMART SM01018 5 87 1.4E-13 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17490 84d8525473f553749eff8ba68e8eabf4 228 Pfam PF02607 B12 binding domain 8 77 9.5E-8 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17490 84d8525473f553749eff8ba68e8eabf4 228 SUPERFAMILY SSF52242 84 216 4.45E-38 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS17490 84d8525473f553749eff8ba68e8eabf4 228 SUPERFAMILY SSF47644 5 78 9.42E-12 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS05435 2ca7873014a8782a02ea3ef4f8493faf 529 Pfam PF08502 LeuA allosteric (dimerisation) domain 377 516 1.4E-26 T 25-04-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS05435 2ca7873014a8782a02ea3ef4f8493faf 529 SMART SM00917 375 517 3.5E-36 T 25-04-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS05435 2ca7873014a8782a02ea3ef4f8493faf 529 SUPERFAMILY SSF51569 1 293 2.93E-82 T 25-04-2017 CLFO_RS05435 2ca7873014a8782a02ea3ef4f8493faf 529 Gene3D G3DSA:3.20.20.70 1 346 6.4E-121 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS05435 2ca7873014a8782a02ea3ef4f8493faf 529 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 4 524 1.3E-224 T 25-04-2017 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 CLFO_RS05435 2ca7873014a8782a02ea3ef4f8493faf 529 SUPERFAMILY SSF110921 407 513 3.4E-19 T 25-04-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS05435 2ca7873014a8782a02ea3ef4f8493faf 529 Pfam PF00682 HMGL-like 4 275 7.5E-51 T 25-04-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLFO_RS05435 2ca7873014a8782a02ea3ef4f8493faf 529 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 203 216 - T 25-04-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS05435 2ca7873014a8782a02ea3ef4f8493faf 529 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 25-04-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS08715 916933a00ce7e6272ae36ff7d67ec4a8 253 SUPERFAMILY SSF52540 70 230 2.22E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08715 916933a00ce7e6272ae36ff7d67ec4a8 253 SMART SM00382 102 237 1.3E-5 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS08715 916933a00ce7e6272ae36ff7d67ec4a8 253 PIRSF PIRSF003073 3 253 4.5E-80 T 25-04-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CLFO_RS08715 916933a00ce7e6272ae36ff7d67ec4a8 253 Gene3D G3DSA:3.40.50.300 73 235 3.4E-27 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08715 916933a00ce7e6272ae36ff7d67ec4a8 253 Pfam PF01695 IstB-like ATP binding protein 62 233 5.4E-52 T 25-04-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 CLFO_RS04780 916933a00ce7e6272ae36ff7d67ec4a8 253 SUPERFAMILY SSF52540 70 230 2.22E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04780 916933a00ce7e6272ae36ff7d67ec4a8 253 SMART SM00382 102 237 1.3E-5 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04780 916933a00ce7e6272ae36ff7d67ec4a8 253 PIRSF PIRSF003073 3 253 4.5E-80 T 25-04-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CLFO_RS04780 916933a00ce7e6272ae36ff7d67ec4a8 253 Gene3D G3DSA:3.40.50.300 73 235 3.4E-27 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04780 916933a00ce7e6272ae36ff7d67ec4a8 253 Pfam PF01695 IstB-like ATP binding protein 62 233 5.4E-52 T 25-04-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 CLFO_RS20900 916933a00ce7e6272ae36ff7d67ec4a8 253 SUPERFAMILY SSF52540 70 230 2.22E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20900 916933a00ce7e6272ae36ff7d67ec4a8 253 SMART SM00382 102 237 1.3E-5 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS20900 916933a00ce7e6272ae36ff7d67ec4a8 253 PIRSF PIRSF003073 3 253 4.5E-80 T 25-04-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CLFO_RS20900 916933a00ce7e6272ae36ff7d67ec4a8 253 Gene3D G3DSA:3.40.50.300 73 235 3.4E-27 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20900 916933a00ce7e6272ae36ff7d67ec4a8 253 Pfam PF01695 IstB-like ATP binding protein 62 233 5.4E-52 T 25-04-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 CLFO_RS16545 916933a00ce7e6272ae36ff7d67ec4a8 253 SUPERFAMILY SSF52540 70 230 2.22E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16545 916933a00ce7e6272ae36ff7d67ec4a8 253 SMART SM00382 102 237 1.3E-5 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS16545 916933a00ce7e6272ae36ff7d67ec4a8 253 PIRSF PIRSF003073 3 253 4.5E-80 T 25-04-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CLFO_RS16545 916933a00ce7e6272ae36ff7d67ec4a8 253 Gene3D G3DSA:3.40.50.300 73 235 3.4E-27 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16545 916933a00ce7e6272ae36ff7d67ec4a8 253 Pfam PF01695 IstB-like ATP binding protein 62 233 5.4E-52 T 25-04-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 CLFO_RS12170 916933a00ce7e6272ae36ff7d67ec4a8 253 SUPERFAMILY SSF52540 70 230 2.22E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12170 916933a00ce7e6272ae36ff7d67ec4a8 253 SMART SM00382 102 237 1.3E-5 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12170 916933a00ce7e6272ae36ff7d67ec4a8 253 PIRSF PIRSF003073 3 253 4.5E-80 T 25-04-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CLFO_RS12170 916933a00ce7e6272ae36ff7d67ec4a8 253 Gene3D G3DSA:3.40.50.300 73 235 3.4E-27 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12170 916933a00ce7e6272ae36ff7d67ec4a8 253 Pfam PF01695 IstB-like ATP binding protein 62 233 5.4E-52 T 25-04-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 CLFO_RS16975 916933a00ce7e6272ae36ff7d67ec4a8 253 SUPERFAMILY SSF52540 70 230 2.22E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16975 916933a00ce7e6272ae36ff7d67ec4a8 253 SMART SM00382 102 237 1.3E-5 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS16975 916933a00ce7e6272ae36ff7d67ec4a8 253 PIRSF PIRSF003073 3 253 4.5E-80 T 25-04-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CLFO_RS16975 916933a00ce7e6272ae36ff7d67ec4a8 253 Gene3D G3DSA:3.40.50.300 73 235 3.4E-27 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16975 916933a00ce7e6272ae36ff7d67ec4a8 253 Pfam PF01695 IstB-like ATP binding protein 62 233 5.4E-52 T 25-04-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 CLFO_RS07590 916933a00ce7e6272ae36ff7d67ec4a8 253 SUPERFAMILY SSF52540 70 230 2.22E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07590 916933a00ce7e6272ae36ff7d67ec4a8 253 SMART SM00382 102 237 1.3E-5 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS07590 916933a00ce7e6272ae36ff7d67ec4a8 253 PIRSF PIRSF003073 3 253 4.5E-80 T 25-04-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CLFO_RS07590 916933a00ce7e6272ae36ff7d67ec4a8 253 Gene3D G3DSA:3.40.50.300 73 235 3.4E-27 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07590 916933a00ce7e6272ae36ff7d67ec4a8 253 Pfam PF01695 IstB-like ATP binding protein 62 233 5.4E-52 T 25-04-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 CLFO_RS04150 c5730813eb2279dd13c3ff47e98e8f4f 303 SUPERFAMILY SSF53850 61 259 1.06E-40 T 25-04-2017 CLFO_RS04150 c5730813eb2279dd13c3ff47e98e8f4f 303 Gene3D G3DSA:3.40.190.10 131 253 3.4E-5 T 25-04-2017 CLFO_RS04150 c5730813eb2279dd13c3ff47e98e8f4f 303 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 46 290 5.0E-68 T 25-04-2017 CLFO_RS04150 c5730813eb2279dd13c3ff47e98e8f4f 303 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 267 9.1E-66 T 25-04-2017 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 CLFO_RS04150 c5730813eb2279dd13c3ff47e98e8f4f 303 Gene3D G3DSA:3.40.190.10 254 273 5.8E-4 T 25-04-2017 CLFO_RS04150 c5730813eb2279dd13c3ff47e98e8f4f 303 Gene3D G3DSA:3.40.190.10 65 130 5.8E-4 T 25-04-2017 CLFO_RS13450 42e9cd7e68da0a01a9773c580be078dc 749 Pfam PF01551 Peptidase family M23 649 744 3.4E-31 T 25-04-2017 IPR016047 Peptidase M23 CLFO_RS13450 42e9cd7e68da0a01a9773c580be078dc 749 SUPERFAMILY SSF53187 416 601 1.38E-35 T 25-04-2017 CLFO_RS13450 42e9cd7e68da0a01a9773c580be078dc 749 Gene3D G3DSA:3.40.630.40 416 601 4.4E-35 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS13450 42e9cd7e68da0a01a9773c580be078dc 749 Gene3D G3DSA:3.30.2010.10 220 258 5.1E-4 T 25-04-2017 CLFO_RS13450 42e9cd7e68da0a01a9773c580be078dc 749 SMART SM00646 481 597 3.4E-8 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS13450 42e9cd7e68da0a01a9773c580be078dc 749 Pfam PF05569 BlaR1 peptidase M56 11 341 7.0E-54 T 25-04-2017 IPR008756 Peptidase M56 CLFO_RS13450 42e9cd7e68da0a01a9773c580be078dc 749 Gene3D G3DSA:2.70.70.10 602 749 2.4E-48 T 25-04-2017 CLFO_RS13450 42e9cd7e68da0a01a9773c580be078dc 749 SUPERFAMILY SSF51261 609 748 5.36E-53 T 25-04-2017 IPR011055 Duplicated hybrid motif CLFO_RS13450 42e9cd7e68da0a01a9773c580be078dc 749 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 418 597 1.6E-32 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS09315 65b29cc8a1a06a157da92eda1fcd2ab7 554 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 8 552 1.1E-202 T 25-04-2017 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CLFO_RS09315 65b29cc8a1a06a157da92eda1fcd2ab7 554 Hamap MF_01491 Ribonuclease J [rnj]. 3 554 47.847 T 25-04-2017 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CLFO_RS09315 65b29cc8a1a06a157da92eda1fcd2ab7 554 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 353 406 1.9E-11 T 25-04-2017 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CLFO_RS09315 65b29cc8a1a06a157da92eda1fcd2ab7 554 SUPERFAMILY SSF56281 8 423 7.21E-98 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS09315 65b29cc8a1a06a157da92eda1fcd2ab7 554 SMART SM00849 20 214 1.6E-25 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS09315 65b29cc8a1a06a157da92eda1fcd2ab7 554 Gene3D G3DSA:3.60.15.10 6 254 3.3E-82 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS09315 65b29cc8a1a06a157da92eda1fcd2ab7 554 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 363 391 - T 25-04-2017 IPR001587 Ribonuclease J, conserved site CLFO_RS09315 65b29cc8a1a06a157da92eda1fcd2ab7 554 Pfam PF00753 Metallo-beta-lactamase superfamily 20 163 1.4E-14 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS09315 65b29cc8a1a06a157da92eda1fcd2ab7 554 PIRSF PIRSF004803 2 554 5.9E-245 T 25-04-2017 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CLFO_RS17690 ae480e189d1f17a1bffcb330ea241522 406 Gene3D G3DSA:3.90.226.10 197 405 1.9E-72 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS17690 ae480e189d1f17a1bffcb330ea241522 406 Pfam PF03572 Peptidase family S41 213 373 2.9E-58 T 25-04-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CLFO_RS17690 ae480e189d1f17a1bffcb330ea241522 406 SMART SM00228 114 186 8.7E-13 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS17690 ae480e189d1f17a1bffcb330ea241522 406 Pfam PF13180 PDZ domain 114 195 4.0E-14 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS17690 ae480e189d1f17a1bffcb330ea241522 406 Gene3D G3DSA:3.30.750.44 71 118 2.3E-7 T 25-04-2017 CLFO_RS17690 ae480e189d1f17a1bffcb330ea241522 406 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 66 382 6.0E-108 T 25-04-2017 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CLFO_RS17690 ae480e189d1f17a1bffcb330ea241522 406 SUPERFAMILY SSF50156 105 198 1.16E-17 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS17690 ae480e189d1f17a1bffcb330ea241522 406 Gene3D G3DSA:2.30.42.10 119 196 3.9E-26 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS17690 ae480e189d1f17a1bffcb330ea241522 406 SMART SM00245 188 374 2.9E-74 T 25-04-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CLFO_RS17690 ae480e189d1f17a1bffcb330ea241522 406 SUPERFAMILY SSF52096 207 393 3.48E-77 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS17690 ae480e189d1f17a1bffcb330ea241522 406 SUPERFAMILY SSF52096 62 133 3.48E-77 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS18125 9fb3556be628abe4307ac804dc485a64 335 SUPERFAMILY SSF88713 126 299 2.39E-29 T 25-04-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLFO_RS18125 9fb3556be628abe4307ac804dc485a64 335 Gene3D G3DSA:3.20.20.370 138 296 3.3E-22 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS18125 9fb3556be628abe4307ac804dc485a64 335 Pfam PF01522 Polysaccharide deacetylase 164 294 1.4E-21 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS04900 dfa87f70b98bfe98fddf86d0c75e6338 246 Pfam PF02361 Cobalt transport protein 5 215 3.1E-30 T 25-04-2017 IPR003339 ABC/ECF transporter, transmembrane component CLFO_RS05180 3622c73aa12499705f0786987b026afa 188 SUPERFAMILY SSF51306 24 173 1.83E-45 T 25-04-2017 IPR015927 Peptidase S24/S26A/S26B/S26C CLFO_RS05180 3622c73aa12499705f0786987b026afa 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 125 144 2.3E-17 T 25-04-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLFO_RS05180 3622c73aa12499705f0786987b026afa 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 24 40 2.3E-17 T 25-04-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLFO_RS05180 3622c73aa12499705f0786987b026afa 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 92 2.3E-17 T 25-04-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLFO_RS05180 3622c73aa12499705f0786987b026afa 188 Gene3D G3DSA:2.10.109.10 125 174 3.5E-35 T 25-04-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain CLFO_RS05180 3622c73aa12499705f0786987b026afa 188 Gene3D G3DSA:2.10.109.10 21 90 3.5E-35 T 25-04-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain CLFO_RS05180 3622c73aa12499705f0786987b026afa 188 ProSitePatterns PS00760 Signal peptidases I lysine active site. 82 94 - T 25-04-2017 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CLFO_RS05180 3622c73aa12499705f0786987b026afa 188 Pfam PF00717 Peptidase S24-like 31 103 4.5E-13 T 25-04-2017 IPR019759 Peptidase S24/S26A/S26B CLFO_RS05180 3622c73aa12499705f0786987b026afa 188 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 8 168 5.6E-44 T 25-04-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLFO_RS12900 468bd72bb5becba6ec32be7320d61cc7 314 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 311 6.2E-24 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS12900 468bd72bb5becba6ec32be7320d61cc7 314 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 292 5.2E-15 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS12900 468bd72bb5becba6ec32be7320d61cc7 314 Pfam PF00005 ABC transporter 25 181 9.0E-22 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS12900 468bd72bb5becba6ec32be7320d61cc7 314 SUPERFAMILY SSF52540 4 252 2.85E-57 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12900 468bd72bb5becba6ec32be7320d61cc7 314 SMART SM00382 33 239 1.4E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12900 468bd72bb5becba6ec32be7320d61cc7 314 Gene3D G3DSA:3.40.50.300 3 255 9.7E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04910 0176f532940568fd01c9e652ec08062c 242 SUPERFAMILY SSF56112 47 215 6.5E-19 T 25-04-2017 IPR011009 Protein kinase-like domain CLFO_RS04910 0176f532940568fd01c9e652ec08062c 242 Gene3D G3DSA:3.90.1200.10 98 222 4.5E-7 T 25-04-2017 CLFO_RS04910 0176f532940568fd01c9e652ec08062c 242 Pfam PF01163 RIO1 family 58 170 1.3E-7 T 25-04-2017 CLFO_RS04910 0176f532940568fd01c9e652ec08062c 242 Gene3D G3DSA:3.30.200.20 53 96 3.1E-4 T 25-04-2017 CLFO_RS17190 7e83c63700231b47d08e9e5f61aad31b 902 SUPERFAMILY SSF56731 159 330 2.48E-6 T 25-04-2017 CLFO_RS17190 7e83c63700231b47d08e9e5f61aad31b 902 SMART SM00400 27 81 9.2E-13 T 25-04-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLFO_RS17190 7e83c63700231b47d08e9e5f61aad31b 902 Gene3D G3DSA:3.40.1360.10 220 334 1.6E-9 T 25-04-2017 CLFO_RS17190 7e83c63700231b47d08e9e5f61aad31b 902 Pfam PF01807 CHC2 zinc finger 7 86 4.6E-15 T 25-04-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLFO_RS17190 7e83c63700231b47d08e9e5f61aad31b 902 Gene3D G3DSA:3.90.580.10 6 86 6.0E-20 T 25-04-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLFO_RS17190 7e83c63700231b47d08e9e5f61aad31b 902 Pfam PF06048 Domain of unknown function (DUF927) 374 647 1.3E-65 T 25-04-2017 IPR009270 Domain of unknown function DUF927 CLFO_RS17190 7e83c63700231b47d08e9e5f61aad31b 902 SUPERFAMILY SSF57783 5 87 1.6E-17 T 25-04-2017 CLFO_RS15835 75d6b7a282476289806c051fb811fa18 336 Gene3D G3DSA:3.40.50.720 6 192 6.8E-63 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15835 75d6b7a282476289806c051fb811fa18 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 309 2.0E-74 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15835 75d6b7a282476289806c051fb811fa18 336 SUPERFAMILY SSF51735 2 326 1.63E-93 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15835 75d6b7a282476289806c051fb811fa18 336 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 7.3E-5 T 25-04-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CLFO_RS15835 75d6b7a282476289806c051fb811fa18 336 PRINTS PR01713 Nucleotide sugar epimerase signature 239 254 7.3E-5 T 25-04-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CLFO_RS15835 75d6b7a282476289806c051fb811fa18 336 PRINTS PR01713 Nucleotide sugar epimerase signature 282 299 7.3E-5 T 25-04-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CLFO_RS15835 75d6b7a282476289806c051fb811fa18 336 Gene3D G3DSA:3.90.25.10 193 327 1.6E-31 T 25-04-2017 CLFO_RS15835 75d6b7a282476289806c051fb811fa18 336 TIGRFAM TIGR04180 EDH_00030: NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family 9 303 5.9E-162 T 25-04-2017 IPR026390 NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family CLFO_RS18270 10bf9fdd1b24b2f46e49862d4d0e71de 224 Gene3D G3DSA:3.40.470.10 3 221 9.7E-97 T 25-04-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLFO_RS18270 10bf9fdd1b24b2f46e49862d4d0e71de 224 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 25-04-2017 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLFO_RS18270 10bf9fdd1b24b2f46e49862d4d0e71de 224 SUPERFAMILY SSF52141 2 221 3.49E-94 T 25-04-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLFO_RS18270 10bf9fdd1b24b2f46e49862d4d0e71de 224 SMART SM00987 49 209 9.4E-38 T 25-04-2017 CLFO_RS18270 10bf9fdd1b24b2f46e49862d4d0e71de 224 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 5 220 41.331 T 25-04-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLFO_RS18270 10bf9fdd1b24b2f46e49862d4d0e71de 224 Pfam PF03167 Uracil DNA glycosylase superfamily 53 208 6.7E-27 T 25-04-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLFO_RS18270 10bf9fdd1b24b2f46e49862d4d0e71de 224 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 213 2.8E-82 T 25-04-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLFO_RS18270 10bf9fdd1b24b2f46e49862d4d0e71de 224 SMART SM00986 49 209 9.4E-38 T 25-04-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLFO_RS13185 7af666abf044a68909ad11d072a9a1f6 116 Gene3D G3DSA:1.10.10.10 4 109 1.4E-38 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13185 7af666abf044a68909ad11d072a9a1f6 116 Pfam PF01638 HxlR-like helix-turn-helix 19 106 1.4E-31 T 25-04-2017 IPR002577 Helix-turn-helix, HxlR type CLFO_RS13185 7af666abf044a68909ad11d072a9a1f6 116 SUPERFAMILY SSF46785 9 105 1.73E-30 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS19775 4d58f248d8770f48a3526689518a1d76 70 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 16 68 4.7E-17 T 25-04-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLFO_RS19775 4d58f248d8770f48a3526689518a1d76 70 Gene3D G3DSA:1.20.5.1030 13 69 8.2E-19 T 25-04-2017 CLFO_RS19775 4d58f248d8770f48a3526689518a1d76 70 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 15 70 3.0E-17 T 25-04-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CLFO_RS19775 4d58f248d8770f48a3526689518a1d76 70 Hamap MF_00422 Protein translocase subunit SecE [secE]. 12 67 11.622 T 25-04-2017 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLFO_RS19775 4d58f248d8770f48a3526689518a1d76 70 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 17 45 - T 25-04-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLFO_RS11640 bef149a578e4b509e6d407d22475e529 307 ProDom PD128584 YPHB BH1976 TRANSMEMBRANE MEMBRANE SEAA 18 301 2.0E-112 T 25-04-2017 CLFO_RS11640 bef149a578e4b509e6d407d22475e529 307 Pfam PF14045 YIEGIA protein 8 296 3.4E-117 T 25-04-2017 IPR025918 YIEGIA protein CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 350 363 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 Pfam PF02954 Bacterial regulatory protein, Fis family 588 628 4.8E-14 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 611 631 4.0E-8 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 594 611 4.0E-8 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 Gene3D G3DSA:3.40.50.300 322 499 3.8E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 SUPERFAMILY SSF46689 540 631 9.68E-17 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 Gene3D G3DSA:1.10.8.60 500 568 1.1E-17 T 25-04-2017 CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 SMART SM00382 346 491 1.7E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 540 549 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 Pfam PF00158 Sigma-54 interaction domain 326 493 7.1E-70 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 Gene3D G3DSA:3.30.450.20 197 302 9.7E-13 T 25-04-2017 CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 SMART SM00091 199 267 7.3E-5 T 25-04-2017 IPR000014 PAS domain CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 SUPERFAMILY SSF55785 196 301 5.71E-11 T 25-04-2017 IPR000014 PAS domain CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 SUPERFAMILY SSF52540 328 557 4.46E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 202 258 2.2E-8 T 25-04-2017 IPR000014 PAS domain CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 Pfam PF00989 PAS fold 200 303 5.6E-11 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 Gene3D G3DSA:1.10.10.60 578 631 1.3E-18 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS05920 77455c91bced482b42e8db33b6fd526a 631 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 413 428 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS16660 f104ea30b5462110fb4aead9499e9d47 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 4.2E-14 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS16660 f104ea30b5462110fb4aead9499e9d47 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 8.6E-9 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS16660 f104ea30b5462110fb4aead9499e9d47 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 8.6E-9 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS16660 f104ea30b5462110fb4aead9499e9d47 203 SUPERFAMILY SSF46689 6 63 1.95E-15 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16660 f104ea30b5462110fb4aead9499e9d47 203 Gene3D G3DSA:1.10.10.60 7 56 3.7E-20 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16660 f104ea30b5462110fb4aead9499e9d47 203 SUPERFAMILY SSF48498 78 203 5.78E-25 T 25-04-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLFO_RS16660 f104ea30b5462110fb4aead9499e9d47 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 53 - T 25-04-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLFO_RS16660 f104ea30b5462110fb4aead9499e9d47 203 Gene3D G3DSA:1.10.357.10 57 203 3.5E-24 T 25-04-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLFO_RS03805 084f20e20b9807e95461d6a235dd95ff 277 SUPERFAMILY SSF51182 2 261 4.4E-112 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS03805 084f20e20b9807e95461d6a235dd95ff 277 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 2 277 55.691 T 25-04-2017 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CLFO_RS03805 084f20e20b9807e95461d6a235dd95ff 277 Pfam PF04962 KduI/IolB family 35 271 6.4E-36 T 25-04-2017 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CLFO_RS03805 084f20e20b9807e95461d6a235dd95ff 277 Gene3D G3DSA:2.60.120.520 21 131 1.5E-53 T 25-04-2017 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CLFO_RS03805 084f20e20b9807e95461d6a235dd95ff 277 PIRSF PIRSF006625 2 277 2.6E-137 T 25-04-2017 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CLFO_RS03805 084f20e20b9807e95461d6a235dd95ff 277 Gene3D G3DSA:2.60.120.500 132 276 5.3E-78 T 25-04-2017 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CLFO_RS07260 d1579ca50b06ce767c083840f9c92c2a 305 SUPERFAMILY SSF160240 210 290 1.1E-17 T 25-04-2017 CLFO_RS07260 d1579ca50b06ce767c083840f9c92c2a 305 SUPERFAMILY SSF161111 7 208 1.96E-59 T 25-04-2017 CLFO_RS07260 d1579ca50b06ce767c083840f9c92c2a 305 Pfam PF01545 Cation efflux family 15 207 2.0E-49 T 25-04-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLFO_RS07260 d1579ca50b06ce767c083840f9c92c2a 305 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 289 2.1E-20 T 25-04-2017 IPR027470 Cation efflux protein, cytoplasmic domain CLFO_RS07260 d1579ca50b06ce767c083840f9c92c2a 305 Gene3D G3DSA:1.20.1510.10 11 207 7.6E-53 T 25-04-2017 IPR027469 Cation efflux protein transmembrane domain CLFO_RS07260 d1579ca50b06ce767c083840f9c92c2a 305 Gene3D G3DSA:3.30.70.1350 208 290 7.4E-20 T 25-04-2017 IPR027470 Cation efflux protein, cytoplasmic domain CLFO_RS07260 d1579ca50b06ce767c083840f9c92c2a 305 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 290 9.7E-83 T 25-04-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLFO_RS16055 652da3c1290e7a2e0d1dafd0b6ffcf71 1336 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 322 573 7.1E-41 T 25-04-2017 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLFO_RS16055 652da3c1290e7a2e0d1dafd0b6ffcf71 1336 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 259 1.8E-25 T 25-04-2017 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLFO_RS16055 652da3c1290e7a2e0d1dafd0b6ffcf71 1336 Gene3D G3DSA:3.30.420.40 319 384 1.5E-4 T 25-04-2017 CLFO_RS16055 652da3c1290e7a2e0d1dafd0b6ffcf71 1336 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 322 572 1.4E-51 T 25-04-2017 IPR008275 CoA enzyme activase CLFO_RS16055 652da3c1290e7a2e0d1dafd0b6ffcf71 1336 Gene3D G3DSA:3.30.420.40 98 236 3.2E-38 T 25-04-2017 CLFO_RS16055 652da3c1290e7a2e0d1dafd0b6ffcf71 1336 Gene3D G3DSA:3.30.420.40 416 553 4.3E-47 T 25-04-2017 CLFO_RS16055 652da3c1290e7a2e0d1dafd0b6ffcf71 1336 SUPERFAMILY SSF53067 321 573 2.83E-38 T 25-04-2017 CLFO_RS16055 652da3c1290e7a2e0d1dafd0b6ffcf71 1336 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 634 849 5.8E-57 T 25-04-2017 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLFO_RS16055 652da3c1290e7a2e0d1dafd0b6ffcf71 1336 SUPERFAMILY SSF53067 2 259 1.18E-29 T 25-04-2017 CLFO_RS15470 bae077c1aa2f46dbfc7acd1011cc19d1 318 Gene3D G3DSA:3.80.30.20 23 253 8.7E-30 T 25-04-2017 IPR023404 Radical SAM, alpha/beta horseshoe CLFO_RS15470 bae077c1aa2f46dbfc7acd1011cc19d1 318 Pfam PF04055 Radical SAM superfamily 44 204 4.1E-11 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS15470 bae077c1aa2f46dbfc7acd1011cc19d1 318 Pfam PF16199 Radical_SAM C-terminal domain 213 296 4.1E-20 T 25-04-2017 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 CLFO_RS15470 bae077c1aa2f46dbfc7acd1011cc19d1 318 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 7 306 2.2E-101 T 25-04-2017 IPR005911 Protein YhcC-like GO:0051536 CLFO_RS15470 bae077c1aa2f46dbfc7acd1011cc19d1 318 SMART SM00729 24 252 7.2E-36 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS15470 bae077c1aa2f46dbfc7acd1011cc19d1 318 SUPERFAMILY SSF102114 8 286 1.11E-47 T 25-04-2017 CLFO_RS02345 27f94de9872529367551235d311a0890 588 Gene3D G3DSA:3.40.50.300 15 192 4.9E-35 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02345 27f94de9872529367551235d311a0890 588 Pfam PF02421 Ferrous iron transport protein B 19 173 1.5E-50 T 25-04-2017 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLFO_RS02345 27f94de9872529367551235d311a0890 588 Pfam PF07664 Ferrous iron transport protein B C terminus 402 451 2.0E-9 T 25-04-2017 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CLFO_RS02345 27f94de9872529367551235d311a0890 588 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 41 59 3.0E-6 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS02345 27f94de9872529367551235d311a0890 588 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 68 83 3.0E-6 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS02345 27f94de9872529367551235d311a0890 588 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 20 40 3.0E-6 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS02345 27f94de9872529367551235d311a0890 588 SUPERFAMILY SSF52540 18 186 1.96E-35 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02345 27f94de9872529367551235d311a0890 588 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 165 7.8E-15 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS02345 27f94de9872529367551235d311a0890 588 Pfam PF07670 Nucleoside recognition 465 556 3.0E-8 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS02345 27f94de9872529367551235d311a0890 588 Pfam PF07670 Nucleoside recognition 303 396 6.0E-12 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS09835 9b3701946a5ce7655eb72481abb2b460 276 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 24 270 3.1E-107 T 25-04-2017 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CLFO_RS09835 9b3701946a5ce7655eb72481abb2b460 276 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 24 270 1.1E-110 T 25-04-2017 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CLFO_RS09835 9b3701946a5ce7655eb72481abb2b460 276 SUPERFAMILY SSF53167 5 273 3.14E-96 T 25-04-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLFO_RS09835 9b3701946a5ce7655eb72481abb2b460 276 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 77 118 - T 25-04-2017 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 CLFO_RS09835 9b3701946a5ce7655eb72481abb2b460 276 PIRSF PIRSF000477 2 273 9.4E-112 T 25-04-2017 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CLFO_RS09835 9b3701946a5ce7655eb72481abb2b460 276 Pfam PF01048 Phosphorylase superfamily 25 270 1.4E-50 T 25-04-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLFO_RS09835 9b3701946a5ce7655eb72481abb2b460 276 Gene3D G3DSA:3.40.50.1580 5 273 4.4E-108 T 25-04-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLFO_RS02020 3cd6646ccce0ea8a3e360f30aec35308 239 SUPERFAMILY SSF56104 3 237 3.2E-85 T 25-04-2017 CLFO_RS02020 3cd6646ccce0ea8a3e360f30aec35308 239 Gene3D G3DSA:3.30.470.20 97 222 8.7E-56 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS02020 3cd6646ccce0ea8a3e360f30aec35308 239 Gene3D G3DSA:3.30.200.20 9 96 1.2E-37 T 25-04-2017 CLFO_RS02020 3cd6646ccce0ea8a3e360f30aec35308 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 7 237 33.823 T 25-04-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS02020 3cd6646ccce0ea8a3e360f30aec35308 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 176 184 - T 25-04-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS02020 3cd6646ccce0ea8a3e360f30aec35308 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 89 103 - T 25-04-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS02020 3cd6646ccce0ea8a3e360f30aec35308 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 8 237 1.5E-76 T 25-04-2017 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CLFO_RS02020 3cd6646ccce0ea8a3e360f30aec35308 239 Pfam PF01259 SAICAR synthetase 9 234 7.1E-69 T 25-04-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS12795 106f13c73d344be76f33562cddb5254e 561 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 385 532 2.7E-48 T 25-04-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLFO_RS12795 106f13c73d344be76f33562cddb5254e 561 SUPERFAMILY SSF52518 364 555 8.04E-65 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS12795 106f13c73d344be76f33562cddb5254e 561 SUPERFAMILY SSF52467 187 353 8.09E-57 T 25-04-2017 IPR029035 DHS-like NAD/FAD-binding domain CLFO_RS12795 106f13c73d344be76f33562cddb5254e 561 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 422 441 - T 25-04-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CLFO_RS12795 106f13c73d344be76f33562cddb5254e 561 SUPERFAMILY SSF52518 2 174 2.36E-60 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS12795 106f13c73d344be76f33562cddb5254e 561 Gene3D G3DSA:3.40.50.1220 189 347 1.7E-56 T 25-04-2017 IPR029035 DHS-like NAD/FAD-binding domain CLFO_RS12795 106f13c73d344be76f33562cddb5254e 561 Gene3D G3DSA:3.40.50.970 348 547 8.0E-70 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS12795 106f13c73d344be76f33562cddb5254e 561 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 554 1.0E-207 T 25-04-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CLFO_RS12795 106f13c73d344be76f33562cddb5254e 561 Gene3D G3DSA:3.40.50.970 2 174 2.3E-71 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS12795 106f13c73d344be76f33562cddb5254e 561 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 1.9E-58 T 25-04-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CLFO_RS12795 106f13c73d344be76f33562cddb5254e 561 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 329 2.8E-40 T 25-04-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 SUPERFAMILY SSF82866 796 1018 8.37E-53 T 25-04-2017 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1017 1.2E-265 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 Gene3D G3DSA:3.30.70.1430 560 656 1.1E-14 T 25-04-2017 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 SUPERFAMILY SSF82693 559 661 4.24E-16 T 25-04-2017 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 SUPERFAMILY SSF82714 712 797 1.31E-12 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 Gene3D G3DSA:3.30.70.1320 151 177 2.1E-10 T 25-04-2017 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 Gene3D G3DSA:3.30.70.1320 268 295 2.1E-10 T 25-04-2017 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 SUPERFAMILY SSF82693 40 134 2.07E-25 T 25-04-2017 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 SUPERFAMILY SSF82714 183 264 1.26E-14 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 Gene3D G3DSA:1.20.1640.10 296 490 1.1E-58 T 25-04-2017 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 Gene3D G3DSA:3.30.70.1430 40 139 1.9E-27 T 25-04-2017 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 SUPERFAMILY SSF82693 135 180 5.23E-15 T 25-04-2017 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 SUPERFAMILY SSF82693 266 320 5.23E-15 T 25-04-2017 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 Gene3D G3DSA:1.10.3850.10 803 1018 1.2E-60 T 25-04-2017 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 Gene3D G3DSA:3.30.2090.10 711 800 6.4E-13 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 Gene3D G3DSA:3.30.2090.10 182 264 3.5E-13 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 SUPERFAMILY SSF82866 289 486 4.71E-48 T 25-04-2017 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 5.6E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 5.6E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 5.6E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 5.6E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 5.6E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.6E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.6E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 5.6E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS06550 fa5fdcae9404245e98ec3dcb038a06f2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 617 631 5.6E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS20770 70eab10cca0eaa72e800c1e607d5ccaa 331 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 329 35.12 T 25-04-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CLFO_RS20770 70eab10cca0eaa72e800c1e607d5ccaa 331 Gene3D G3DSA:3.40.718.10 2 326 1.0E-130 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS20770 70eab10cca0eaa72e800c1e607d5ccaa 331 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 325 4.4E-111 T 25-04-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CLFO_RS20770 70eab10cca0eaa72e800c1e607d5ccaa 331 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 326 9.8E-116 T 25-04-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CLFO_RS20770 70eab10cca0eaa72e800c1e607d5ccaa 331 SUPERFAMILY SSF53659 5 326 4.32E-107 T 25-04-2017 CLFO_RS01795 3674fb40b87ec3ef77e4909d3eef6fa1 653 Pfam PF07695 7TM diverse intracellular signalling 228 425 1.5E-29 T 25-04-2017 IPR011623 7TM-DISM receptor, extracellular domain, type 1 CLFO_RS01795 3674fb40b87ec3ef77e4909d3eef6fa1 653 Gene3D G3DSA:3.30.565.10 502 643 3.2E-22 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01795 3674fb40b87ec3ef77e4909d3eef6fa1 653 SMART SM00387 542 645 1.6E-7 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01795 3674fb40b87ec3ef77e4909d3eef6fa1 653 SUPERFAMILY SSF49785 69 210 5.44E-11 T 25-04-2017 IPR008979 Galactose-binding domain-like CLFO_RS01795 3674fb40b87ec3ef77e4909d3eef6fa1 653 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 546 643 2.9E-12 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01795 3674fb40b87ec3ef77e4909d3eef6fa1 653 Pfam PF06580 Histidine kinase 448 528 2.0E-25 T 25-04-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLFO_RS01795 3674fb40b87ec3ef77e4909d3eef6fa1 653 SUPERFAMILY SSF55874 505 642 2.36E-20 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01795 3674fb40b87ec3ef77e4909d3eef6fa1 653 Gene3D G3DSA:2.60.120.260 71 210 7.1E-8 T 25-04-2017 IPR008979 Galactose-binding domain-like CLFO_RS05595 5090658ddfb671696be8f2054586a850 558 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 105 115 - T 25-04-2017 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CLFO_RS05595 5090658ddfb671696be8f2054586a850 558 SUPERFAMILY SSF52540 6 556 1.28E-246 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05595 5090658ddfb671696be8f2054586a850 558 Gene3D G3DSA:3.10.410.10 445 534 1.3E-38 T 25-04-2017 CLFO_RS05595 5090658ddfb671696be8f2054586a850 558 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 330 341 - T 25-04-2017 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CLFO_RS05595 5090658ddfb671696be8f2054586a850 558 Pfam PF01268 Formate--tetrahydrofolate ligase 4 558 1.9E-269 T 25-04-2017 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CLFO_RS05595 5090658ddfb671696be8f2054586a850 558 Gene3D G3DSA:3.30.1510.10 131 249 3.3E-55 T 25-04-2017 CLFO_RS05595 5090658ddfb671696be8f2054586a850 558 Gene3D G3DSA:3.40.50.300 250 443 2.0E-152 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05595 5090658ddfb671696be8f2054586a850 558 Gene3D G3DSA:3.40.50.300 15 130 2.0E-152 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05595 5090658ddfb671696be8f2054586a850 558 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 3 558 48.985 T 25-04-2017 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CLFO_RS19600 2d56caa5f58e2d63d4088ef9c05dae74 216 Pfam PF05191 Adenylate kinase, active site lid 127 162 8.1E-15 T 25-04-2017 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 CLFO_RS19600 2d56caa5f58e2d63d4088ef9c05dae74 216 Hamap MF_00235 Adenylate kinase [adk]. 1 213 51.295 T 25-04-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLFO_RS19600 2d56caa5f58e2d63d4088ef9c05dae74 216 PRINTS PR00094 Adenylate kinase signature 32 46 1.1E-35 T 25-04-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLFO_RS19600 2d56caa5f58e2d63d4088ef9c05dae74 216 PRINTS PR00094 Adenylate kinase signature 160 175 1.1E-35 T 25-04-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLFO_RS19600 2d56caa5f58e2d63d4088ef9c05dae74 216 PRINTS PR00094 Adenylate kinase signature 4 17 1.1E-35 T 25-04-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLFO_RS19600 2d56caa5f58e2d63d4088ef9c05dae74 216 PRINTS PR00094 Adenylate kinase signature 81 97 1.1E-35 T 25-04-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLFO_RS19600 2d56caa5f58e2d63d4088ef9c05dae74 216 PRINTS PR00094 Adenylate kinase signature 177 191 1.1E-35 T 25-04-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CLFO_RS19600 2d56caa5f58e2d63d4088ef9c05dae74 216 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 25-04-2017 CLFO_RS19600 2d56caa5f58e2d63d4088ef9c05dae74 216 TIGRFAM TIGR01351 adk: adenylate kinase 3 212 1.7E-81 T 25-04-2017 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 CLFO_RS19600 2d56caa5f58e2d63d4088ef9c05dae74 216 Pfam PF00406 Adenylate kinase 5 189 8.2E-59 T 25-04-2017 CLFO_RS19600 2d56caa5f58e2d63d4088ef9c05dae74 216 Gene3D G3DSA:3.40.50.300 1 211 3.9E-79 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19600 2d56caa5f58e2d63d4088ef9c05dae74 216 SUPERFAMILY SSF52540 1 215 1.11E-44 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 142 151 - T 25-04-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 SUPERFAMILY SSF53738 32 240 8.24E-48 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 501 546 7.5E-8 T 25-04-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 44 182 7.7E-45 T 25-04-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 SUPERFAMILY SSF53738 308 458 4.32E-31 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 212 318 1.4E-22 T 25-04-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 Gene3D G3DSA:3.40.120.10 234 312 2.7E-22 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 Gene3D G3DSA:3.40.120.10 22 219 1.2E-63 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 328 455 3.1E-24 T 25-04-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 Gene3D G3DSA:3.40.120.10 313 459 1.5E-37 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 Gene3D G3DSA:3.30.310.50 484 562 8.8E-25 T 25-04-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 SUPERFAMILY SSF55957 472 549 1.02E-15 T 25-04-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01285 c1897a729ed19816f61dd443d70d114f 564 SUPERFAMILY SSF53738 228 318 1.35E-14 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS01160 f5573891a7c884b7386a98db0fbaa9f4 494 Pfam PF14296 O-antigen polysaccharide polymerase Wzy 12 487 3.4E-24 T 25-04-2017 IPR029468 O-antigen polysaccharide polymerase Wzy CLFO_RS01160 f5573891a7c884b7386a98db0fbaa9f4 494 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 116 467 1.2E-14 T 25-04-2017 CLFO_RS06905 c5abf78f1b8bcc1dcce3589d87749334 140 SUPERFAMILY SSF47188 2 131 3.27E-25 T 25-04-2017 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CLFO_RS06905 c5abf78f1b8bcc1dcce3589d87749334 140 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 9.0E-8 T 25-04-2017 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 CLFO_RS06905 c5abf78f1b8bcc1dcce3589d87749334 140 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 3 131 7.6E-30 T 25-04-2017 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CLFO_RS06905 c5abf78f1b8bcc1dcce3589d87749334 140 Gene3D G3DSA:1.20.120.50 1 132 5.0E-28 T 25-04-2017 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CLFO_RS01035 cfc067aeb1fe356fa9c06273c329957e 137 Gene3D G3DSA:2.60.15.10 4 90 1.1E-27 T 25-04-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS01035 cfc067aeb1fe356fa9c06273c329957e 137 SUPERFAMILY SSF46604 87 133 1.83E-10 T 25-04-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 CLFO_RS01035 cfc067aeb1fe356fa9c06273c329957e 137 Gene3D G3DSA:1.20.5.440 91 132 2.1E-17 T 25-04-2017 CLFO_RS01035 cfc067aeb1fe356fa9c06273c329957e 137 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 132 3.4E-34 T 25-04-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS01035 cfc067aeb1fe356fa9c06273c329957e 137 SUPERFAMILY SSF51344 4 85 1.96E-21 T 25-04-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS01035 cfc067aeb1fe356fa9c06273c329957e 137 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 130 21.254 T 25-04-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS01035 cfc067aeb1fe356fa9c06273c329957e 137 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 2.0E-25 T 25-04-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS01035 cfc067aeb1fe356fa9c06273c329957e 137 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 89 1.0E-14 T 25-04-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS01035 cfc067aeb1fe356fa9c06273c329957e 137 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 87 131 4.5E-16 T 25-04-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 CLFO_RS13505 e1645853ee57e6ddeedbf6128cf70e3c 759 Pfam PF01564 Spermine/spermidine synthase 279 410 1.1E-4 T 25-04-2017 CLFO_RS13505 e1645853ee57e6ddeedbf6128cf70e3c 759 SUPERFAMILY SSF53335 225 416 7.44E-19 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS13505 e1645853ee57e6ddeedbf6128cf70e3c 759 Gene3D G3DSA:3.40.50.150 285 420 3.5E-20 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 SUPERFAMILY SSF47384 399 478 1.79E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 Gene3D G3DSA:3.30.450.20 266 381 1.5E-22 T 25-04-2017 CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 Gene3D G3DSA:3.30.565.10 465 638 4.3E-47 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 Pfam PF00512 His Kinase A (phospho-acceptor) domain 411 478 2.6E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 527 634 5.8E-25 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 SMART SM00387 524 636 7.5E-36 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 SUPERFAMILY SSF55785 259 381 2.44E-21 T 25-04-2017 IPR000014 PAS domain CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 SMART SM00388 410 478 1.1E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 Pfam PF17159 Membrane-associated sensor domain 38 263 4.5E-71 T 25-04-2017 IPR033425 Membrane-associated sensor domain MASE3 CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 Pfam PF00989 PAS fold 272 380 5.5E-11 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 SUPERFAMILY SSF55874 467 637 1.26E-45 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 Gene3D G3DSA:1.10.287.130 402 464 3.8E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 270 385 4.9E-16 T 25-04-2017 IPR000014 PAS domain CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 589 5.8E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 614 5.8E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 633 5.8E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 575 5.8E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS02310 dd71e26afb1dffeed0f9298604cd1ea3 670 SMART SM00091 272 338 1.4E-11 T 25-04-2017 IPR000014 PAS domain CLFO_RS10915 247dee70625487bb0c194bf77a3d6c8b 348 PIRSF PIRSF004640 1 348 3.8E-154 T 25-04-2017 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CLFO_RS10915 247dee70625487bb0c194bf77a3d6c8b 348 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2 345 1.2E-135 T 25-04-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CLFO_RS10915 247dee70625487bb0c194bf77a3d6c8b 348 Pfam PF04551 GcpE protein 5 346 1.2E-144 T 25-04-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CLFO_RS10915 247dee70625487bb0c194bf77a3d6c8b 348 SUPERFAMILY SSF56014 258 345 2.36E-13 T 25-04-2017 CLFO_RS10915 247dee70625487bb0c194bf77a3d6c8b 348 Gene3D G3DSA:3.20.20.70 31 125 9.9E-7 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS10915 247dee70625487bb0c194bf77a3d6c8b 348 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 1 346 33.805 T 25-04-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CLFO_RS10915 247dee70625487bb0c194bf77a3d6c8b 348 SUPERFAMILY SSF51717 11 224 3.22E-11 T 25-04-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS21430 2bc7e532209a46ffb913cc2e344fa72d 70 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 68 9.6E-27 T 25-04-2017 IPR002696 Putative membrane protein insertion efficiency factor CLFO_RS21430 2bc7e532209a46ffb913cc2e344fa72d 70 Pfam PF01809 Haemolytic domain 3 67 6.3E-30 T 25-04-2017 IPR002696 Putative membrane protein insertion efficiency factor CLFO_RS21430 2bc7e532209a46ffb913cc2e344fa72d 70 SMART SM01234 1 68 1.3E-41 T 25-04-2017 IPR002696 Putative membrane protein insertion efficiency factor CLFO_RS21430 2bc7e532209a46ffb913cc2e344fa72d 70 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 69 4.0E-21 T 25-04-2017 IPR002696 Putative membrane protein insertion efficiency factor CLFO_RS21430 2bc7e532209a46ffb913cc2e344fa72d 70 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 23.639 T 25-04-2017 IPR002696 Putative membrane protein insertion efficiency factor CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 SUPERFAMILY SSF158472 191 238 2.22E-10 T 25-04-2017 CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 Gene3D G3DSA:3.30.450.20 34 157 5.8E-6 T 25-04-2017 CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 Gene3D G3DSA:1.10.287.130 232 304 8.2E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 1.1E-12 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 1.1E-12 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 1.1E-12 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 1.1E-12 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 SMART SM00387 351 466 1.9E-32 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 SMART SM00304 189 241 2.2E-11 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 SMART SM00388 242 308 4.1E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 Gene3D G3DSA:3.30.565.10 315 463 3.7E-42 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 Pfam PF00672 HAMP domain 170 238 1.2E-14 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 464 4.4E-24 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 SUPERFAMILY SSF55874 299 464 3.67E-41 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 307 6.9E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS01295 4c45f41c6ca40141599d1bbabdc21084 471 SUPERFAMILY SSF47384 225 308 6.28E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13895 237beb7260fcce2720d8f2b19f15a8e7 314 Pfam PF12849 PBP superfamily domain 94 300 1.9E-21 T 25-04-2017 IPR024370 PBP domain CLFO_RS13895 237beb7260fcce2720d8f2b19f15a8e7 314 SUPERFAMILY SSF53850 60 313 8.36E-49 T 25-04-2017 CLFO_RS13895 237beb7260fcce2720d8f2b19f15a8e7 314 Gene3D G3DSA:3.40.190.10 274 313 2.9E-5 T 25-04-2017 CLFO_RS13895 237beb7260fcce2720d8f2b19f15a8e7 314 Gene3D G3DSA:3.40.190.10 137 272 1.5E-34 T 25-04-2017 CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 SUPERFAMILY SSF55874 208 361 3.41E-33 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 SUPERFAMILY SSF47384 128 207 4.32E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 Gene3D G3DSA:1.10.287.130 135 205 1.6E-9 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 307 317 2.4E-10 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 303 2.4E-10 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 340 2.4E-10 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 359 2.4E-10 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 SUPERFAMILY SSF52172 4 143 1.14E-42 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 Gene3D G3DSA:3.30.565.10 208 360 7.2E-34 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 SMART SM00448 9 122 2.5E-41 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 Gene3D G3DSA:3.40.50.2300 4 134 4.4E-46 T 25-04-2017 CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 SMART SM00387 250 362 1.2E-21 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 250 360 1.1E-17 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS05775 0fcc7a5692135815fc1b1947b988ed32 363 Pfam PF00072 Response regulator receiver domain 11 122 2.7E-32 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS20480 d498b536902e23596b56f8d19261a050 367 SUPERFAMILY SSF102114 34 359 2.35E-49 T 25-04-2017 CLFO_RS20480 d498b536902e23596b56f8d19261a050 367 SMART SM00876 256 359 1.8E-33 T 25-04-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLFO_RS20480 d498b536902e23596b56f8d19261a050 367 Gene3D G3DSA:3.20.20.70 35 359 3.9E-46 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS20480 d498b536902e23596b56f8d19261a050 367 Pfam PF04055 Radical SAM superfamily 81 229 4.1E-12 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS20480 d498b536902e23596b56f8d19261a050 367 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 12 365 2.4E-141 T 25-04-2017 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 CLFO_RS20480 d498b536902e23596b56f8d19261a050 367 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 358 6.2E-27 T 25-04-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLFO_RS09400 c862833c181e86438d63ccad4d047ae3 270 Gene3D G3DSA:3.30.559.10 179 264 4.4E-32 T 25-04-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 CLFO_RS09400 c862833c181e86438d63ccad4d047ae3 270 Gene3D G3DSA:3.30.559.10 33 142 4.4E-32 T 25-04-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 CLFO_RS09400 c862833c181e86438d63ccad4d047ae3 270 SUPERFAMILY SSF52777 33 142 1.07E-27 T 25-04-2017 CLFO_RS09400 c862833c181e86438d63ccad4d047ae3 270 SUPERFAMILY SSF52777 187 265 1.07E-27 T 25-04-2017 CLFO_RS09400 c862833c181e86438d63ccad4d047ae3 270 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 38 136 1.3E-10 T 25-04-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CLFO_RS09400 c862833c181e86438d63ccad4d047ae3 270 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 182 264 9.6E-10 T 25-04-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 SUPERFAMILY SSF46689 300 347 2.44E-12 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 SMART SM00342 263 346 1.7E-26 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 Pfam PF00072 Response regulator receiver domain 4 116 3.7E-27 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 Gene3D G3DSA:1.10.10.60 245 299 1.3E-13 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 SMART SM00448 2 116 9.2E-32 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 Gene3D G3DSA:3.40.50.2300 1 119 7.9E-32 T 25-04-2017 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 300 342 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 330 346 1.9E-6 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 330 1.9E-6 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 SUPERFAMILY SSF46689 248 297 7.62E-7 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 Gene3D G3DSA:1.10.10.60 300 347 9.6E-15 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 Pfam PF12833 Helix-turn-helix domain 269 347 4.7E-17 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS05785 87315b8c877473331267572b09e3ffd3 349 SUPERFAMILY SSF52172 1 120 3.56E-32 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS09385 d1fe197d01de4dadccc9d292c4cc812c 331 SMART SM00422 62 132 1.5E-16 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS09385 d1fe197d01de4dadccc9d292c4cc812c 331 Gene3D G3DSA:1.10.1660.10 61 129 2.2E-24 T 25-04-2017 CLFO_RS09385 d1fe197d01de4dadccc9d292c4cc812c 331 SUPERFAMILY SSF46955 61 166 1.06E-24 T 25-04-2017 IPR009061 Putative DNA-binding domain CLFO_RS09385 d1fe197d01de4dadccc9d292c4cc812c 331 Pfam PF06445 GyrI-like small molecule binding domain 174 327 6.0E-13 T 25-04-2017 IPR029442 GyrI-like small molecule binding domain CLFO_RS09385 d1fe197d01de4dadccc9d292c4cc812c 331 Gene3D G3DSA:3.20.80.10 269 329 1.4E-13 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS09385 d1fe197d01de4dadccc9d292c4cc812c 331 SUPERFAMILY SSF55136 219 328 2.79E-16 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS09385 d1fe197d01de4dadccc9d292c4cc812c 331 SMART SM00871 174 328 2.2E-19 T 25-04-2017 IPR010499 Bacterial transcription activator, effector binding CLFO_RS09385 d1fe197d01de4dadccc9d292c4cc812c 331 Pfam PF13411 MerR HTH family regulatory protein 62 130 7.0E-16 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 SUPERFAMILY SSF47648 1 69 3.01E-22 T 25-04-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 Pfam PF00591 Glycosyl transferase family, a/b domain 78 306 1.4E-44 T 25-04-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 5.5E-23 T 25-04-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 SMART SM00941 345 419 4.5E-27 T 25-04-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 418 9.2E-175 T 25-04-2017 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 Gene3D G3DSA:3.90.1170.30 335 424 4.7E-28 T 25-04-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 SUPERFAMILY SSF54680 334 433 3.66E-27 T 25-04-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 Gene3D G3DSA:3.40.1030.10 70 334 2.2E-112 T 25-04-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 25-04-2017 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 SUPERFAMILY SSF52418 69 329 4.71E-92 T 25-04-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 419 6.9E-21 T 25-04-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 Gene3D G3DSA:1.20.970.10 1 67 1.0E-32 T 25-04-2017 CLFO_RS09840 a04da3e7ddde0b4b2d2fbef8f8b70f78 441 PIRSF PIRSF000478 1 434 6.3E-164 T 25-04-2017 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS17660 fbe736e35f3dfd654f92ec9926faeca6 157 PIRSF PIRSF000216 2 157 1.3E-51 T 25-04-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17660 fbe736e35f3dfd654f92ec9926faeca6 157 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 15 157 1.4E-47 T 25-04-2017 CLFO_RS17660 fbe736e35f3dfd654f92ec9926faeca6 157 Gene3D G3DSA:3.40.30.10 78 156 2.9E-14 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS17660 fbe736e35f3dfd654f92ec9926faeca6 157 SUPERFAMILY SSF52833 6 157 7.38E-49 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS17640 fbe736e35f3dfd654f92ec9926faeca6 157 PIRSF PIRSF000216 2 157 1.3E-51 T 25-04-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17640 fbe736e35f3dfd654f92ec9926faeca6 157 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 15 157 1.4E-47 T 25-04-2017 CLFO_RS17640 fbe736e35f3dfd654f92ec9926faeca6 157 Gene3D G3DSA:3.40.30.10 78 156 2.9E-14 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS17640 fbe736e35f3dfd654f92ec9926faeca6 157 SUPERFAMILY SSF52833 6 157 7.38E-49 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 126 136 - T 25-04-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 Pfam PF02772 S-adenosylmethionine synthetase, central domain 125 241 1.6E-50 T 25-04-2017 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 390 2.0E-189 T 25-04-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 Gene3D G3DSA:3.30.300.10 146 243 7.4E-50 T 25-04-2017 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 243 382 3.0E-71 T 25-04-2017 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.0E-44 T 25-04-2017 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 Gene3D G3DSA:3.30.300.10 254 391 3.9E-71 T 25-04-2017 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 SUPERFAMILY SSF55973 243 391 1.02E-70 T 25-04-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 PIRSF PIRSF000497 1 393 2.5E-178 T 25-04-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 Gene3D G3DSA:3.30.300.10 11 145 4.1E-48 T 25-04-2017 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 269 277 - T 25-04-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 SUPERFAMILY SSF55973 3 109 6.28E-48 T 25-04-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 SUPERFAMILY SSF55973 120 242 2.63E-54 T 25-04-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLFO_RS01315 b3594f87d2b82e656aed216459c71aad 397 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 393 59.909 T 25-04-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 Gene3D G3DSA:1.10.150.20 187 247 2.6E-31 T 25-04-2017 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 Gene3D G3DSA:1.10.150.20 680 786 1.2E-33 T 25-04-2017 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 Gene3D G3DSA:1.20.1060.10 512 631 3.1E-42 T 25-04-2017 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 SMART SM00475 2 263 2.3E-132 T 25-04-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 646 661 1.8E-74 T 25-04-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 759 770 1.8E-74 T 25-04-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 722 747 1.8E-74 T 25-04-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 843 856 1.8E-74 T 25-04-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 623 645 1.8E-74 T 25-04-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 698 711 1.8E-74 T 25-04-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 781 792 1.8E-74 T 25-04-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 668 691 1.8E-74 T 25-04-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 829 1.8E-74 T 25-04-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 TIGRFAM TIGR00593 pola: DNA polymerase I 7 896 0.0 T 25-04-2017 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 SMART SM00279 174 209 5.0E-18 T 25-04-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 267 9.2E-35 T 25-04-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 Pfam PF00476 DNA polymerase family A 519 894 3.1E-156 T 25-04-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 SUPERFAMILY SSF53098 310 486 4.55E-34 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 SUPERFAMILY SSF56672 491 895 1.01E-154 T 25-04-2017 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 SMART SM00474 307 487 7.2E-11 T 25-04-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 SUPERFAMILY SSF47807 172 285 7.92E-34 T 25-04-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 Gene3D G3DSA:3.30.70.370 632 679 1.1E-63 T 25-04-2017 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 Gene3D G3DSA:3.30.70.370 787 896 1.1E-63 T 25-04-2017 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 ProSitePatterns PS00447 DNA polymerase family A signature. 722 741 - T 25-04-2017 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 SUPERFAMILY SSF88723 3 169 3.08E-53 T 25-04-2017 IPR029060 PIN domain-like CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 Gene3D G3DSA:3.40.50.1010 5 186 7.9E-66 T 25-04-2017 IPR029060 PIN domain-like CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 Pfam PF01612 3'-5' exonuclease 310 486 8.8E-13 T 25-04-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 SMART SM00482 654 860 2.1E-106 T 25-04-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 170 6.7E-52 T 25-04-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CLFO_RS07560 3c92ba90eb5289e8afc4b449fb877705 896 Gene3D G3DSA:3.30.420.10 310 510 6.3E-50 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 SUPERFAMILY SSF54826 3 138 1.36E-59 T 25-04-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 SMART SM01193 4 134 1.1E-99 T 25-04-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 SMART SM01192 139 427 2.0E-220 T 25-04-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 Gene3D G3DSA:3.20.20.120 128 427 5.2E-135 T 25-04-2017 IPR029065 Enolase C-terminal domain-like CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 SUPERFAMILY SSF51604 138 427 8.63E-131 T 25-04-2017 IPR029065 Enolase C-terminal domain-like CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 25-04-2017 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 Pfam PF03952 Enolase, N-terminal domain 4 134 3.5E-61 T 25-04-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 Hamap MF_00318 Enolase [eno]. 2 413 46.001 T 25-04-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 Gene3D G3DSA:3.30.390.10 4 126 1.1E-57 T 25-04-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 2.2E-215 T 25-04-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 PRINTS PR00148 Enolase signature 107 123 4.1E-46 T 25-04-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 PRINTS PR00148 Enolase signature 37 51 4.1E-46 T 25-04-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 PRINTS PR00148 Enolase signature 336 350 4.1E-46 T 25-04-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 PRINTS PR00148 Enolase signature 313 324 4.1E-46 T 25-04-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 PRINTS PR00148 Enolase signature 365 382 4.1E-46 T 25-04-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 PRINTS PR00148 Enolase signature 161 174 4.1E-46 T 25-04-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 PIRSF PIRSF001400 1 427 1.3E-194 T 25-04-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14290 be06d3dc6c31d53c6cf4c62b6c9b8a5e 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 426 1.1E-133 T 25-04-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14740 81be89acbedff31d013e45b46f8039c1 286 Pfam PF01171 PP-loop family 55 218 2.4E-15 T 25-04-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CLFO_RS14740 81be89acbedff31d013e45b46f8039c1 286 Gene3D G3DSA:3.40.50.620 38 217 5.8E-21 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS14740 81be89acbedff31d013e45b46f8039c1 286 PIRSF PIRSF004976 4 286 1.3E-67 T 25-04-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 CLFO_RS14740 81be89acbedff31d013e45b46f8039c1 286 SUPERFAMILY SSF52402 32 227 5.95E-45 T 25-04-2017 CLFO_RS03295 e908f5e8b1e93e1525f1ea40a97100fb 604 SMART SM00283 328 589 4.7E-25 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS03295 e908f5e8b1e93e1525f1ea40a97100fb 604 SUPERFAMILY SSF111126 1 168 4.29E-39 T 25-04-2017 IPR024096 NO signalling/Golgi transport ligand-binding domain CLFO_RS03295 e908f5e8b1e93e1525f1ea40a97100fb 604 Pfam PF07700 Haem-NO-binding 2 158 6.6E-39 T 25-04-2017 IPR011644 Heme-NO binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 CLFO_RS03295 e908f5e8b1e93e1525f1ea40a97100fb 604 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 395 586 2.6E-33 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS03295 e908f5e8b1e93e1525f1ea40a97100fb 604 Gene3D G3DSA:1.10.287.950 531 583 2.8E-38 T 25-04-2017 CLFO_RS03295 e908f5e8b1e93e1525f1ea40a97100fb 604 Gene3D G3DSA:1.10.287.950 343 495 2.8E-38 T 25-04-2017 CLFO_RS03295 e908f5e8b1e93e1525f1ea40a97100fb 604 Gene3D G3DSA:3.90.1520.10 1 181 1.9E-50 T 25-04-2017 CLFO_RS03295 e908f5e8b1e93e1525f1ea40a97100fb 604 SUPERFAMILY SSF58104 306 602 3.79E-51 T 25-04-2017 CLFO_RS05370 485757e2c3f81955712ebdc959df60a3 245 Gene3D G3DSA:2.160.10.10 99 232 1.7E-50 T 25-04-2017 CLFO_RS05370 485757e2c3f81955712ebdc959df60a3 245 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 17 244 3.4E-105 T 25-04-2017 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 CLFO_RS05370 485757e2c3f81955712ebdc959df60a3 245 Gene3D G3DSA:3.30.70.250 14 96 1.6E-30 T 25-04-2017 CLFO_RS05370 485757e2c3f81955712ebdc959df60a3 245 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 128 0.0011 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS05370 485757e2c3f81955712ebdc959df60a3 245 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 166 2.6E-6 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS05370 485757e2c3f81955712ebdc959df60a3 245 SUPERFAMILY SSF51161 97 231 5.96E-53 T 25-04-2017 IPR011004 Trimeric LpxA-like CLFO_RS05370 485757e2c3f81955712ebdc959df60a3 245 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 16 96 1.4E-30 T 25-04-2017 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 CLFO_RS05370 485757e2c3f81955712ebdc959df60a3 245 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 184 212 - T 25-04-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CLFO_RS05370 485757e2c3f81955712ebdc959df60a3 245 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 12 245 42.616 T 25-04-2017 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 CLFO_RS05370 485757e2c3f81955712ebdc959df60a3 245 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 210 1.5E-12 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS00880 9c1daddd6a01ccc91c8aafc82337569c 214 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 25-04-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 CLFO_RS00880 9c1daddd6a01ccc91c8aafc82337569c 214 Gene3D G3DSA:3.20.20.70 1 212 5.2E-76 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS00880 9c1daddd6a01ccc91c8aafc82337569c 214 SUPERFAMILY SSF51569 1 212 2.83E-80 T 25-04-2017 CLFO_RS00880 9c1daddd6a01ccc91c8aafc82337569c 214 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 6.2E-102 T 25-04-2017 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLFO_RS00880 9c1daddd6a01ccc91c8aafc82337569c 214 Hamap MF_00494 Probable transaldolase [tal]. 1 214 48.517 T 25-04-2017 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLFO_RS00880 9c1daddd6a01ccc91c8aafc82337569c 214 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 25-04-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 CLFO_RS00880 9c1daddd6a01ccc91c8aafc82337569c 214 Pfam PF00923 Transaldolase 3 207 9.3E-61 T 25-04-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 CLFO_RS11250 47bdd408a694a3c4f29acdd8f99ea381 346 Pfam PF16199 Radical_SAM C-terminal domain 186 272 4.9E-21 T 25-04-2017 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 CLFO_RS11250 47bdd408a694a3c4f29acdd8f99ea381 346 Gene3D G3DSA:3.80.30.20 9 227 9.8E-32 T 25-04-2017 IPR023404 Radical SAM, alpha/beta horseshoe CLFO_RS11250 47bdd408a694a3c4f29acdd8f99ea381 346 Pfam PF04055 Radical SAM superfamily 13 180 3.4E-17 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS11250 47bdd408a694a3c4f29acdd8f99ea381 346 SUPERFAMILY SSF102114 10 270 3.79E-55 T 25-04-2017 CLFO_RS11250 47bdd408a694a3c4f29acdd8f99ea381 346 SMART SM00729 7 225 1.3E-34 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 SUPERFAMILY SSF53223 1 120 3.17E-29 T 25-04-2017 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 119 3.7E-32 T 25-04-2017 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 Gene3D G3DSA:3.40.192.10 6 138 1.6E-37 T 25-04-2017 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 4.3E-60 T 25-04-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 4.3E-60 T 25-04-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 4.3E-60 T 25-04-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 4.3E-60 T 25-04-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 4.3E-60 T 25-04-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 4.3E-60 T 25-04-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 4.3E-60 T 25-04-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 6.7E-58 T 25-04-2017 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 SUPERFAMILY SSF51735 121 279 5.26E-40 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 282 32.933 T 25-04-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CLFO_RS05605 297dde0065fb6f1fe3725e9e1c3bfd78 284 Gene3D G3DSA:3.40.50.720 139 263 2.7E-48 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS09660 1265b3525609984e90e259049e9538ff 173 PIRSF PIRSF021435 2 173 4.6E-42 T 25-04-2017 IPR014198 Stage III sporulation protein AB CLFO_RS09660 1265b3525609984e90e259049e9538ff 173 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 4 173 8.7E-46 T 25-04-2017 IPR014198 Stage III sporulation protein AB CLFO_RS09660 1265b3525609984e90e259049e9538ff 173 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 4 173 3.3E-44 T 25-04-2017 IPR014198 Stage III sporulation protein AB CLFO_RS02445 df25916c7c5f0691074d684e4ff21b89 271 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 13 268 1.4E-65 T 25-04-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLFO_RS02445 df25916c7c5f0691074d684e4ff21b89 271 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 34 58 1.9E-29 T 25-04-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLFO_RS02445 df25916c7c5f0691074d684e4ff21b89 271 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 125 149 1.9E-29 T 25-04-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLFO_RS02445 df25916c7c5f0691074d684e4ff21b89 271 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 178 195 1.9E-29 T 25-04-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLFO_RS02445 df25916c7c5f0691074d684e4ff21b89 271 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 196 214 1.9E-29 T 25-04-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLFO_RS02445 df25916c7c5f0691074d684e4ff21b89 271 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 153 176 1.9E-29 T 25-04-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLFO_RS02445 df25916c7c5f0691074d684e4ff21b89 271 SUPERFAMILY SSF56770 14 270 7.2E-73 T 25-04-2017 CLFO_RS02445 df25916c7c5f0691074d684e4ff21b89 271 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 26 172 1.8E-28 T 25-04-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS02445 df25916c7c5f0691074d684e4ff21b89 271 Gene3D G3DSA:4.10.480.10 191 269 3.9E-31 T 25-04-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CLFO_RS02445 df25916c7c5f0691074d684e4ff21b89 271 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 191 268 2.9E-32 T 25-04-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CLFO_RS02445 df25916c7c5f0691074d684e4ff21b89 271 PIRSF PIRSF000310 2 271 5.7E-95 T 25-04-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CLFO_RS02445 df25916c7c5f0691074d684e4ff21b89 271 Gene3D G3DSA:3.40.50.700 14 189 9.5E-45 T 25-04-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS18440 8c7f0297cd969d3c31fb2cbe4fff9dff 185 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 13 174 2.2E-56 T 25-04-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLFO_RS18440 8c7f0297cd969d3c31fb2cbe4fff9dff 185 Pfam PF05683 Fumarase C-terminus 6 174 1.0E-62 T 25-04-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLFO_RS18440 8c7f0297cd969d3c31fb2cbe4fff9dff 185 Gene3D G3DSA:3.20.130.10 2 174 2.2E-73 T 25-04-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLFO_RS18440 8c7f0297cd969d3c31fb2cbe4fff9dff 185 SUPERFAMILY SSF117457 5 174 3.27E-65 T 25-04-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLFO_RS13650 c71bae5b9d264ba47388f8527398967d 600 Pfam PF00890 FAD binding domain 150 582 5.5E-86 T 25-04-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS13650 c71bae5b9d264ba47388f8527398967d 600 SMART SM00900 50 124 3.3E-21 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS13650 c71bae5b9d264ba47388f8527398967d 600 SUPERFAMILY SSF51905 541 598 9.01E-62 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS13650 c71bae5b9d264ba47388f8527398967d 600 SUPERFAMILY SSF51905 144 400 9.01E-62 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS13650 c71bae5b9d264ba47388f8527398967d 600 Gene3D G3DSA:3.90.700.10 406 529 1.9E-31 T 25-04-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS13650 c71bae5b9d264ba47388f8527398967d 600 Gene3D G3DSA:3.50.50.60 538 598 2.1E-99 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS13650 c71bae5b9d264ba47388f8527398967d 600 Gene3D G3DSA:3.50.50.60 134 383 2.1E-99 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS13650 c71bae5b9d264ba47388f8527398967d 600 SUPERFAMILY SSF56425 407 542 5.53E-34 T 25-04-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS13650 c71bae5b9d264ba47388f8527398967d 600 Pfam PF04205 FMN-binding domain 50 121 2.4E-16 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS13650 c71bae5b9d264ba47388f8527398967d 600 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 150 594 3.7E-127 T 25-04-2017 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 CLFO_RS13650 c71bae5b9d264ba47388f8527398967d 600 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 170 4.1E-6 T 25-04-2017 CLFO_RS13650 c71bae5b9d264ba47388f8527398967d 600 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 546 568 4.1E-6 T 25-04-2017 CLFO_RS02780 d31d825775ca1210e8a179b683a78ee9 264 SMART SM00646 136 254 9.5E-17 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS02780 d31d825775ca1210e8a179b683a78ee9 264 Gene3D G3DSA:3.40.630.40 62 257 2.0E-45 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS02780 d31d825775ca1210e8a179b683a78ee9 264 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 63 254 7.7E-42 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS02780 d31d825775ca1210e8a179b683a78ee9 264 SUPERFAMILY SSF53187 62 257 1.6E-40 T 25-04-2017 CLFO_RS00545 37052989a28b15b0422974f084fbec2c 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 8 315 1.2E-127 T 25-04-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CLFO_RS00545 37052989a28b15b0422974f084fbec2c 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 124 1.1E-49 T 25-04-2017 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CLFO_RS00545 37052989a28b15b0422974f084fbec2c 315 Gene3D G3DSA:3.40.50.2020 164 287 9.1E-55 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS00545 37052989a28b15b0422974f084fbec2c 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 25-04-2017 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CLFO_RS00545 37052989a28b15b0422974f084fbec2c 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 8 315 50.61 T 25-04-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CLFO_RS00545 37052989a28b15b0422974f084fbec2c 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 206 314 2.4E-26 T 25-04-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CLFO_RS00545 37052989a28b15b0422974f084fbec2c 315 SMART SM01400 8 124 9.3E-83 T 25-04-2017 CLFO_RS00545 37052989a28b15b0422974f084fbec2c 315 SUPERFAMILY SSF53271 73 306 4.88E-65 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS00545 37052989a28b15b0422974f084fbec2c 315 Gene3D G3DSA:3.40.50.2020 6 163 1.2E-73 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS15015 c6ae1de90024cefbf7d0c9eb4de32b12 254 Gene3D G3DSA:1.10.1660.10 3 116 3.9E-30 T 25-04-2017 CLFO_RS15015 c6ae1de90024cefbf7d0c9eb4de32b12 254 SMART SM00422 3 72 3.3E-24 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS15015 c6ae1de90024cefbf7d0c9eb4de32b12 254 SUPERFAMILY SSF46955 3 110 3.26E-29 T 25-04-2017 IPR009061 Putative DNA-binding domain CLFO_RS15015 c6ae1de90024cefbf7d0c9eb4de32b12 254 Pfam PF07739 TipAS antibiotic-recognition domain 135 249 4.9E-37 T 25-04-2017 IPR012925 TipAS antibiotic-recognition domain CLFO_RS15015 c6ae1de90024cefbf7d0c9eb4de32b12 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 3.3E-6 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS15015 c6ae1de90024cefbf7d0c9eb4de32b12 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 3.3E-6 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS15015 c6ae1de90024cefbf7d0c9eb4de32b12 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 3.3E-6 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS15015 c6ae1de90024cefbf7d0c9eb4de32b12 254 Pfam PF13411 MerR HTH family regulatory protein 3 69 7.3E-18 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS15015 c6ae1de90024cefbf7d0c9eb4de32b12 254 SUPERFAMILY SSF89082 163 252 1.28E-28 T 25-04-2017 IPR012925 TipAS antibiotic-recognition domain CLFO_RS15015 c6ae1de90024cefbf7d0c9eb4de32b12 254 Gene3D G3DSA:1.10.490.50 165 250 1.8E-29 T 25-04-2017 IPR012925 TipAS antibiotic-recognition domain CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 SUPERFAMILY SSF50447 389 473 5.3E-27 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 2 50 6.1E-15 T 25-04-2017 IPR006847 Translation initiation factor IF-2, N-terminal CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 141 190 6.8E-12 T 25-04-2017 IPR006847 Translation initiation factor IF-2, N-terminal CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 ProSitePatterns PS01176 Initiation factor 2 signature. 668 690 - T 25-04-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 SUPERFAMILY SSF52540 206 389 1.17E-54 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 Pfam PF00009 Elongation factor Tu GTP binding domain 222 378 3.0E-35 T 25-04-2017 CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 715 17.51 T 25-04-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 Gene3D G3DSA:3.40.50.300 210 377 4.1E-48 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 SUPERFAMILY SSF52156 494 624 4.45E-37 T 25-04-2017 IPR023115 Translation initiation factor IF- 2, domain 3 CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 Gene3D G3DSA:2.40.30.10 388 482 3.4E-26 T 25-04-2017 CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 376 1.7E-36 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 Gene3D G3DSA:2.40.30.10 619 715 2.2E-36 T 25-04-2017 CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 Gene3D G3DSA:3.40.50.10050 517 595 9.5E-26 T 25-04-2017 IPR023115 Translation initiation factor IF- 2, domain 3 CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 SUPERFAMILY SSF50447 618 715 2.91E-32 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 Pfam PF11987 Translation-initiation factor 2 503 607 3.0E-38 T 25-04-2017 IPR023115 Translation initiation factor IF- 2, domain 3 CLFO_RS10880 baa63e3c5710424d8a13564efdde39df 715 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 134 715 1.9E-264 T 25-04-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CLFO_RS13910 bf9da47c89090220c7d2a559db2658df 731 Pfam PF02638 Glycosyl hydrolase-like 10 53 376 9.8E-88 T 25-04-2017 IPR003790 Glycosyl hydrolase-like 10 CLFO_RS13910 bf9da47c89090220c7d2a559db2658df 731 Gene3D G3DSA:3.20.20.80 201 364 1.8E-4 T 25-04-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLFO_RS13910 bf9da47c89090220c7d2a559db2658df 731 Pfam PF00395 S-layer homology domain 551 593 1.2E-12 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS13910 bf9da47c89090220c7d2a559db2658df 731 Pfam PF00395 S-layer homology domain 612 653 3.7E-7 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS13910 bf9da47c89090220c7d2a559db2658df 731 Pfam PF00395 S-layer homology domain 679 722 0.0011 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS13910 bf9da47c89090220c7d2a559db2658df 731 SUPERFAMILY SSF51445 86 364 3.95E-19 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 Gene3D G3DSA:1.10.287.130 248 310 1.1E-20 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 Gene3D G3DSA:3.30.565.10 311 485 8.2E-41 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 SUPERFAMILY SSF55874 314 480 2.88E-39 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 SUPERFAMILY SSF158472 207 254 9.15E-11 T 25-04-2017 CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 SMART SM00304 205 257 2.1E-10 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 SMART SM00387 371 484 1.2E-26 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 SUPERFAMILY SSF47384 241 326 2.35E-21 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 Pfam PF00672 HAMP domain 186 253 4.1E-13 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 Gene3D G3DSA:3.30.450.20 30 176 5.3E-6 T 25-04-2017 CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 436 1.5E-9 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 462 1.5E-9 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 1.5E-9 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 481 1.5E-9 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 SMART SM00388 258 325 2.0E-21 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 325 1.2E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS10105 381faab77032fd81c1a86f8d6f44e278 490 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 483 2.2E-21 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13300 d86d9f0edf1f033e1e41f0cb10d7206a 138 SUPERFAMILY SSF46785 2 129 9.56E-29 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13300 d86d9f0edf1f033e1e41f0cb10d7206a 138 Pfam PF02082 Transcriptional regulator 2 82 3.3E-24 T 25-04-2017 IPR000944 Transcription regulator Rrf2-type CLFO_RS13300 d86d9f0edf1f033e1e41f0cb10d7206a 138 Gene3D G3DSA:1.10.10.10 2 130 8.1E-34 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13300 d86d9f0edf1f033e1e41f0cb10d7206a 138 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 127 2.2E-31 T 25-04-2017 IPR000944 Transcription regulator Rrf2-type CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 SUPERFAMILY SSF47384 237 318 5.89E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 SMART SM00304 183 235 2.8E-6 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 SUPERFAMILY SSF158472 183 231 6.28E-8 T 25-04-2017 CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 Pfam PF00672 HAMP domain 165 231 4.6E-12 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 SUPERFAMILY SSF55874 307 467 4.45E-30 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 468 4.3E-16 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 Gene3D G3DSA:1.10.287.130 242 302 1.3E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 SMART SM00387 363 470 1.0E-22 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 Gene3D G3DSA:3.30.565.10 303 468 2.6E-30 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 SMART SM00388 250 317 2.9E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 317 8.5E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 4.2E-6 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06880 02b89057e9824a80bb5343b7cc89a4f1 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 4.2E-6 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS09160 4e8e0bcfdf05515e33f38fe99f207c1e 272 SUPERFAMILY SSF51735 1 270 1.56E-86 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS09160 4e8e0bcfdf05515e33f38fe99f207c1e 272 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 269 7.2E-95 T 25-04-2017 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581 CLFO_RS09160 4e8e0bcfdf05515e33f38fe99f207c1e 272 Pfam PF04321 RmlD substrate binding domain 1 269 1.3E-94 T 25-04-2017 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581 CLFO_RS09160 4e8e0bcfdf05515e33f38fe99f207c1e 272 Gene3D G3DSA:3.40.50.720 1 223 4.3E-57 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 528 3.5E-213 T 25-04-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 147 7.3E-23 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 515 3.0E-48 T 25-04-2017 IPR032090 Peptide chain release factor 3, C-terminal CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 25-04-2017 IPR031157 Tr-type G domain, conserved site CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 SUPERFAMILY SSF52540 9 274 1.06E-88 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 SUPERFAMILY SSF50447 260 388 8.33E-26 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 SUPERFAMILY SSF54980 392 465 1.33E-14 T 25-04-2017 IPR009022 Elongation factor G, III-V domain CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 3 528 50.259 T 25-04-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.8E-11 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 PRINTS PR00315 GTP-binding elongation factor signature 64 72 2.8E-11 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 PRINTS PR00315 GTP-binding elongation factor signature 84 94 2.8E-11 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 PRINTS PR00315 GTP-binding elongation factor signature 136 145 2.8E-11 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 PRINTS PR00315 GTP-binding elongation factor signature 100 111 2.8E-11 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 Pfam PF00009 Elongation factor Tu GTP binding domain 12 273 1.4E-51 T 25-04-2017 CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 Gene3D G3DSA:2.40.30.10 291 389 2.8E-22 T 25-04-2017 CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 Gene3D G3DSA:3.30.70.870 395 466 8.6E-12 T 25-04-2017 CLFO_RS15515 bf278fec746ecc22f540ffd6389adb55 531 Gene3D G3DSA:3.40.50.300 7 279 1.1E-69 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03800 e3769d7aeb14b947cad340ddaa9c0194 521 SUPERFAMILY SSF51126 82 468 6.71E-91 T 25-04-2017 IPR011050 Pectin lyase fold/virulence factor CLFO_RS03800 e3769d7aeb14b947cad340ddaa9c0194 521 ProSitePatterns PS00502 Polygalacturonase active site. 323 337 - T 25-04-2017 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 CLFO_RS03800 e3769d7aeb14b947cad340ddaa9c0194 521 SMART SM00710 343 364 1400.0 T 25-04-2017 IPR006626 Parallel beta-helix repeat CLFO_RS03800 e3769d7aeb14b947cad340ddaa9c0194 521 SMART SM00710 316 337 6.0 T 25-04-2017 IPR006626 Parallel beta-helix repeat CLFO_RS03800 e3769d7aeb14b947cad340ddaa9c0194 521 SMART SM00710 282 303 830.0 T 25-04-2017 IPR006626 Parallel beta-helix repeat CLFO_RS03800 e3769d7aeb14b947cad340ddaa9c0194 521 SMART SM00710 255 281 2200.0 T 25-04-2017 IPR006626 Parallel beta-helix repeat CLFO_RS03800 e3769d7aeb14b947cad340ddaa9c0194 521 Gene3D G3DSA:2.160.20.10 83 462 2.1E-110 T 25-04-2017 IPR012334 Pectin lyase fold CLFO_RS03800 e3769d7aeb14b947cad340ddaa9c0194 521 Pfam PF12708 Pectate lyase superfamily protein 84 136 2.3E-9 T 25-04-2017 IPR024535 Pectate lyase superfamily protein CLFO_RS03800 e3769d7aeb14b947cad340ddaa9c0194 521 Pfam PF00295 Glycosyl hydrolases family 28 183 398 5.3E-40 T 25-04-2017 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 CLFO_RS04165 efc81b9ae40c011ac1b2cf49fac3e898 437 SUPERFAMILY SSF53633 3 276 4.07E-58 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS04165 efc81b9ae40c011ac1b2cf49fac3e898 437 PIRSF PIRSF000726 1 437 2.6E-71 T 25-04-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS04165 efc81b9ae40c011ac1b2cf49fac3e898 437 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 2 437 2.4E-74 T 25-04-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS04165 efc81b9ae40c011ac1b2cf49fac3e898 437 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 25-04-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS04165 efc81b9ae40c011ac1b2cf49fac3e898 437 SUPERFAMILY SSF55021 288 380 2.14E-14 T 25-04-2017 CLFO_RS04165 efc81b9ae40c011ac1b2cf49fac3e898 437 Pfam PF01842 ACT domain 387 425 4.9E-7 T 25-04-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CLFO_RS04165 efc81b9ae40c011ac1b2cf49fac3e898 437 Gene3D G3DSA:3.40.1160.10 1 49 4.0E-42 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS04165 efc81b9ae40c011ac1b2cf49fac3e898 437 Gene3D G3DSA:3.40.1160.10 101 278 4.0E-42 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS04165 efc81b9ae40c011ac1b2cf49fac3e898 437 Pfam PF00696 Amino acid kinase family 3 264 2.8E-30 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS04165 efc81b9ae40c011ac1b2cf49fac3e898 437 SUPERFAMILY SSF55021 367 437 1.87E-20 T 25-04-2017 CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 Gene3D G3DSA:3.40.50.300 610 809 1.1E-54 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 Gene3D G3DSA:3.40.50.300 821 979 4.6E-39 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 SMART SM01058 502 599 5.3E-48 T 25-04-2017 IPR003711 CarD-like/TRCF domain CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 162 1099 0.0 T 25-04-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 SMART SM00982 1026 1126 1.5E-34 T 25-04-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 SUPERFAMILY SSF52540 805 1013 3.85E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 Pfam PF00270 DEAD/DEAH box helicase 629 787 9.0E-17 T 25-04-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 SUPERFAMILY SSF52540 16 371 1.24E-88 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 SUPERFAMILY SSF52540 546 806 2.85E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 Gene3D G3DSA:3.30.2060.10 142 220 3.8E-14 T 25-04-2017 CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 SUPERFAMILY SSF141259 495 571 1.83E-24 T 25-04-2017 IPR003711 CarD-like/TRCF domain CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 SMART SM00487 623 813 4.4E-36 T 25-04-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 SUPERFAMILY SSF52540 380 492 1.12E-11 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 Pfam PF03461 TRCF domain 1027 1119 3.9E-27 T 25-04-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 Pfam PF00271 Helicase conserved C-terminal domain 830 932 2.8E-16 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 SUPERFAMILY SSF143517 1011 1152 4.32E-35 T 25-04-2017 CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 SMART SM00490 849 933 1.8E-19 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 48 1128 29.222 T 25-04-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CLFO_RS00560 c65b0b15e18e0226346f72d87f511101 1173 Pfam PF02559 CarD-like/TRCF domain 503 598 6.8E-31 T 25-04-2017 IPR003711 CarD-like/TRCF domain CLFO_RS15585 195c7b7d4a2a61e2c6683a267eb44eb7 157 Gene3D G3DSA:2.40.50.180 48 81 2.8E-7 T 25-04-2017 CLFO_RS15585 195c7b7d4a2a61e2c6683a267eb44eb7 157 Gene3D G3DSA:2.30.30.40 82 133 2.1E-8 T 25-04-2017 CLFO_RS15585 195c7b7d4a2a61e2c6683a267eb44eb7 157 Pfam PF01584 CheW-like domain 5 140 3.1E-27 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS15585 195c7b7d4a2a61e2c6683a267eb44eb7 157 SUPERFAMILY SSF50341 4 141 6.67E-31 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS15585 195c7b7d4a2a61e2c6683a267eb44eb7 157 SMART SM00260 1 139 1.6E-23 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 Gene3D G3DSA:3.40.50.150 160 431 6.2E-50 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 380 394 2.6E-12 T 25-04-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 357 379 2.6E-12 T 25-04-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 194 206 2.6E-12 T 25-04-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 SUPERFAMILY SSF110849 4 155 5.41E-16 T 25-04-2017 IPR003115 ParB/Sulfiredoxin CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 Pfam PF02195 ParB-like nuclease domain 7 94 9.4E-11 T 25-04-2017 IPR003115 ParB/Sulfiredoxin CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 PIRSF PIRSF036758 1 436 4.0E-156 T 25-04-2017 IPR015840 DNA methyase, ParB domain-containing CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 197 203 - T 25-04-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 SUPERFAMILY SSF53335 342 423 7.28E-51 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 SUPERFAMILY SSF53335 162 314 7.28E-51 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 SMART SM00470 6 95 9.7E-9 T 25-04-2017 IPR003115 ParB/Sulfiredoxin CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 Gene3D G3DSA:3.90.1530.10 3 100 5.5E-16 T 25-04-2017 CLFO_RS10480 d5fce5af35c0e55e303f8abbb83c0861 442 Pfam PF01555 DNA methylase 195 415 4.2E-22 T 25-04-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 Gene3D G3DSA:3.40.190.10 109 197 1.4E-36 T 25-04-2017 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 6.0E-110 T 25-04-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 25-04-2017 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 SUPERFAMILY SSF54782 218 304 1.44E-25 T 25-04-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 209 3.2E-77 T 25-04-2017 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 Gene3D G3DSA:3.40.190.10 2 108 1.4E-48 T 25-04-2017 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 38.133 T 25-04-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 6.8E-19 T 25-04-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 Gene3D G3DSA:3.30.160.40 219 302 2.0E-23 T 25-04-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 SUPERFAMILY SSF53850 2 216 8.47E-79 T 25-04-2017 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 PIRSF PIRSF001438 1 306 2.9E-116 T 25-04-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 3.1E-45 T 25-04-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 3.1E-45 T 25-04-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 3.1E-45 T 25-04-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 3.1E-45 T 25-04-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00275 8e8e7515791e99ec1543a11615a04e13 306 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 3.1E-45 T 25-04-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 SUPERFAMILY SSF47384 523 606 4.12E-22 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 SUPERFAMILY SSF55781 249 416 5.15E-27 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 SMART SM00388 536 604 5.9E-20 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 SMART SM00065 282 426 2.3E-5 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 Gene3D G3DSA:3.30.450.40 272 416 2.4E-20 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 Gene3D G3DSA:3.30.565.10 605 757 5.6E-44 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 686 700 4.5E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 704 714 4.5E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 739 4.5E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 745 758 4.5E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 SMART SM00387 649 761 2.2E-36 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 SUPERFAMILY SSF52172 934 1054 1.27E-40 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 Gene3D G3DSA:3.40.50.2300 931 1054 1.2E-43 T 25-04-2017 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 Gene3D G3DSA:3.40.50.2300 796 916 3.9E-22 T 25-04-2017 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 Pfam PF13185 GAF domain 281 415 2.3E-11 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 Gene3D G3DSA:1.10.287.130 528 600 3.9E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 SUPERFAMILY SSF55874 593 758 9.3E-43 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 SUPERFAMILY SSF52172 796 918 3.56E-23 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 Pfam PF00512 His Kinase A (phospho-acceptor) domain 537 604 5.1E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 165 6.8E-17 T 25-04-2017 IPR024478 4HB MCP domain CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 Pfam PF00072 Response regulator receiver domain 938 1049 3.0E-30 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 Pfam PF00072 Response regulator receiver domain 797 905 7.2E-16 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 651 758 3.4E-27 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 SMART SM00448 795 905 2.9E-16 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18135 dbe6d577b31090013f4cfee163d11872 1055 SMART SM00448 936 1049 1.4E-40 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS02680 df860eb8197e723b5b1c0290f4c5e96d 323 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 44 175 5.6E-60 T 25-04-2017 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CLFO_RS02680 df860eb8197e723b5b1c0290f4c5e96d 323 PIRSF PIRSF002849 1 323 6.3E-111 T 25-04-2017 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted CLFO_RS02680 df860eb8197e723b5b1c0290f4c5e96d 323 SUPERFAMILY SSF52540 6 299 1.77E-42 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02680 df860eb8197e723b5b1c0290f4c5e96d 323 Gene3D G3DSA:1.10.8.300 207 322 3.6E-25 T 25-04-2017 CLFO_RS02680 df860eb8197e723b5b1c0290f4c5e96d 323 Gene3D G3DSA:3.40.50.300 24 191 2.4E-41 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02680 df860eb8197e723b5b1c0290f4c5e96d 323 SMART SM00382 40 183 1.2E-5 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 32 253 8.0E-82 T 25-04-2017 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 252 4.0E-35 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 Pfam PF04542 Sigma-70 region 2 37 103 2.9E-16 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 61 74 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 22 252 1.3E-104 T 25-04-2017 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 223 249 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 Gene3D G3DSA:1.10.10.10 105 157 3.4E-16 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 SUPERFAMILY SSF88659 170 255 4.67E-17 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 Pfam PF04539 Sigma-70 region 3 116 161 5.7E-8 T 25-04-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 PRINTS PR00046 Major sigma-70 factor signature 238 249 1.1E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 PRINTS PR00046 Major sigma-70 factor signature 85 93 1.1E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 PRINTS PR00046 Major sigma-70 factor signature 223 238 1.1E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 PRINTS PR00046 Major sigma-70 factor signature 61 74 1.1E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 PRINTS PR00046 Major sigma-70 factor signature 206 218 1.1E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 SUPERFAMILY SSF88946 13 105 1.1E-33 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 SUPERFAMILY SSF88659 109 182 4.8E-13 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 Gene3D G3DSA:1.10.601.10 12 104 1.2E-31 T 25-04-2017 CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 Gene3D G3DSA:1.10.10.10 195 255 7.3E-11 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS07950 ce481d8003a14fdecfd1dff59719b62f 256 Pfam PF04545 Sigma-70, region 4 203 251 7.8E-17 T 25-04-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20555 e34bd2154b22a3670cb409b1968de234 440 PIRSF PIRSF005353 1 440 2.0E-178 T 25-04-2017 IPR026033 Purine permease PbuG-like CLFO_RS20555 e34bd2154b22a3670cb409b1968de234 440 Pfam PF00860 Permease family 17 401 4.5E-44 T 25-04-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLFO_RS06370 b6d956a5b27851be3e303192894b99b2 561 Gene3D G3DSA:1.10.287.950 300 518 6.3E-52 T 25-04-2017 CLFO_RS06370 b6d956a5b27851be3e303192894b99b2 561 SMART SM00304 204 256 9.8E-13 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS06370 b6d956a5b27851be3e303192894b99b2 561 SUPERFAMILY SSF58104 224 258 3.4E-70 T 25-04-2017 CLFO_RS06370 b6d956a5b27851be3e303192894b99b2 561 SUPERFAMILY SSF58104 291 559 3.4E-70 T 25-04-2017 CLFO_RS06370 b6d956a5b27851be3e303192894b99b2 561 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 164 1.9E-12 T 25-04-2017 IPR024478 4HB MCP domain CLFO_RS06370 b6d956a5b27851be3e303192894b99b2 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 1.3E-20 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS06370 b6d956a5b27851be3e303192894b99b2 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 1.3E-20 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS06370 b6d956a5b27851be3e303192894b99b2 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 1.3E-20 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS06370 b6d956a5b27851be3e303192894b99b2 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 559 2.4E-49 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS06370 b6d956a5b27851be3e303192894b99b2 561 SMART SM00283 285 560 1.6E-82 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS06370 b6d956a5b27851be3e303192894b99b2 561 Pfam PF00672 HAMP domain 185 252 1.2E-17 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS02465 fc756a7129f5e36ba12bb89b3c0be41a 746 SUPERFAMILY SSF55821 169 384 3.36E-49 T 25-04-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain CLFO_RS02465 fc756a7129f5e36ba12bb89b3c0be41a 746 SUPERFAMILY SSF54975 2 84 7.41E-18 T 25-04-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CLFO_RS02465 fc756a7129f5e36ba12bb89b3c0be41a 746 Gene3D G3DSA:3.90.870.10 196 371 9.6E-44 T 25-04-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain CLFO_RS02465 fc756a7129f5e36ba12bb89b3c0be41a 746 Gene3D G3DSA:3.30.70.100 2 84 3.6E-19 T 25-04-2017 CLFO_RS02465 fc756a7129f5e36ba12bb89b3c0be41a 746 Pfam PF00708 Acylphosphatase 2 84 5.3E-17 T 25-04-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CLFO_RS02465 fc756a7129f5e36ba12bb89b3c0be41a 746 PIRSF PIRSF006256 1 746 3.8E-277 T 25-04-2017 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CLFO_RS02465 fc756a7129f5e36ba12bb89b3c0be41a 746 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 2 737 2.3E-240 T 25-04-2017 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CLFO_RS02465 fc756a7129f5e36ba12bb89b3c0be41a 746 Pfam PF07503 HypF finger 102 135 5.9E-14 T 25-04-2017 IPR011125 Zinc finger, HypF-type GO:0008270 CLFO_RS02465 fc756a7129f5e36ba12bb89b3c0be41a 746 Pfam PF07503 HypF finger 152 185 5.8E-17 T 25-04-2017 IPR011125 Zinc finger, HypF-type GO:0008270 CLFO_RS02465 fc756a7129f5e36ba12bb89b3c0be41a 746 SUPERFAMILY SSF53067 617 722 1.68E-5 T 25-04-2017 CLFO_RS02465 fc756a7129f5e36ba12bb89b3c0be41a 746 Pfam PF01300 Telomere recombination 204 378 1.2E-55 T 25-04-2017 IPR006070 YrdC-like domain GO:0003725 CLFO_RS06800 598293142514964813a41743e7d9a841 1245 Gene3D G3DSA:3.30.1330.10 647 806 1.0E-26 T 25-04-2017 IPR016188 PurM-like, N-terminal domain CLFO_RS06800 598293142514964813a41743e7d9a841 1245 SUPERFAMILY SSF52317 978 1244 3.99E-69 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS06800 598293142514964813a41743e7d9a841 1245 Gene3D G3DSA:3.40.50.880 981 1225 1.7E-13 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS06800 598293142514964813a41743e7d9a841 1245 SMART SM01211 981 1244 1.3E-112 T 25-04-2017 CLFO_RS06800 598293142514964813a41743e7d9a841 1245 SUPERFAMILY SSF55326 628 812 1.65E-40 T 25-04-2017 CLFO_RS06800 598293142514964813a41743e7d9a841 1245 TIGRFAM TIGR01857 FGAM-synthase: phosphoribosylformylglycinamidine synthase 3 1244 0.0 T 25-04-2017 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM CLFO_RS06800 598293142514964813a41743e7d9a841 1245 SUPERFAMILY SSF56042 440 605 1.51E-35 T 25-04-2017 IPR010918 AIR synthase-related protein, C-terminal domain CLFO_RS06800 598293142514964813a41743e7d9a841 1245 SUPERFAMILY SSF56042 827 956 2.93E-13 T 25-04-2017 IPR010918 AIR synthase-related protein, C-terminal domain CLFO_RS06800 598293142514964813a41743e7d9a841 1245 Gene3D G3DSA:3.30.1330.10 219 234 1.1E-52 T 25-04-2017 IPR016188 PurM-like, N-terminal domain CLFO_RS06800 598293142514964813a41743e7d9a841 1245 Gene3D G3DSA:3.30.1330.10 289 430 1.1E-52 T 25-04-2017 IPR016188 PurM-like, N-terminal domain CLFO_RS06800 598293142514964813a41743e7d9a841 1245 SUPERFAMILY SSF55326 298 430 5.93E-29 T 25-04-2017 CLFO_RS06800 598293142514964813a41743e7d9a841 1245 SUPERFAMILY SSF55326 204 230 5.93E-29 T 25-04-2017 CLFO_RS06800 598293142514964813a41743e7d9a841 1245 Pfam PF02769 AIR synthase related protein, C-terminal domain 440 589 7.8E-22 T 25-04-2017 IPR010918 AIR synthase-related protein, C-terminal domain CLFO_RS06800 598293142514964813a41743e7d9a841 1245 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 981 1244 1.8E-89 T 25-04-2017 CLFO_RS10655 89e0863155217dba8652ef77dc1ed016 218 SUPERFAMILY SSF46955 27 93 1.03E-16 T 25-04-2017 IPR009061 Putative DNA-binding domain CLFO_RS10655 89e0863155217dba8652ef77dc1ed016 218 SMART SM00422 27 95 7.3E-11 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS10655 89e0863155217dba8652ef77dc1ed016 218 Gene3D G3DSA:1.10.1660.10 27 166 2.0E-16 T 25-04-2017 CLFO_RS10655 89e0863155217dba8652ef77dc1ed016 218 Pfam PF13411 MerR HTH family regulatory protein 27 94 6.5E-23 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS16880 160eb069d57ef74122a83b944ddcf6a6 317 Pfam PF01497 Periplasmic binding protein 89 289 3.9E-27 T 25-04-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CLFO_RS16880 160eb069d57ef74122a83b944ddcf6a6 317 SUPERFAMILY SSF53807 39 309 3.18E-54 T 25-04-2017 CLFO_RS16880 160eb069d57ef74122a83b944ddcf6a6 317 Gene3D G3DSA:3.40.50.1980 37 157 2.4E-31 T 25-04-2017 CLFO_RS16880 160eb069d57ef74122a83b944ddcf6a6 317 Gene3D G3DSA:3.40.50.1980 158 313 2.8E-26 T 25-04-2017 CLFO_RS17950 66c639e258e3f25ebbca4e9d55363184 79 Pfam PF13244 Domain of unknown function (DUF4040) 10 76 1.8E-23 T 25-04-2017 IPR025383 Domain of unknown function DUF4040 CLFO_RS11245 c308b47324ed9e80dc41b4d110771890 1194 SMART SM00968 525 643 6.4E-36 T 25-04-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CLFO_RS11245 c308b47324ed9e80dc41b4d110771890 1194 Gene3D G3DSA:3.40.50.300 1033 1186 2.8E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11245 c308b47324ed9e80dc41b4d110771890 1194 Gene3D G3DSA:3.40.50.300 2 163 2.8E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11245 c308b47324ed9e80dc41b4d110771890 1194 SUPERFAMILY SSF75553 483 689 1.22E-47 T 25-04-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CLFO_RS11245 c308b47324ed9e80dc41b4d110771890 1194 SUPERFAMILY SSF52540 1083 1169 7.62E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11245 c308b47324ed9e80dc41b4d110771890 1194 SUPERFAMILY SSF52540 1 200 7.62E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11245 c308b47324ed9e80dc41b4d110771890 1194 Pfam PF06470 SMC proteins Flexible Hinge Domain 525 641 1.7E-30 T 25-04-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CLFO_RS11245 c308b47324ed9e80dc41b4d110771890 1194 PIRSF PIRSF005719 1 1193 4.7E-302 T 25-04-2017 IPR024704 Structural maintenance of chromosomes protein CLFO_RS11245 c308b47324ed9e80dc41b4d110771890 1194 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1184 0.0 T 25-04-2017 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CLFO_RS11245 c308b47324ed9e80dc41b4d110771890 1194 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1177 7.6E-62 T 25-04-2017 IPR003395 RecF/RecN/SMC, N-terminal CLFO_RS11245 c308b47324ed9e80dc41b4d110771890 1194 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1186 22.684 T 25-04-2017 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CLFO_RS20495 15f7d5a464ae99e299664e1c3a06614e 65 Pfam PF02597 ThiS family 7 65 9.1E-15 T 25-04-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CLFO_RS20495 15f7d5a464ae99e299664e1c3a06614e 65 Gene3D G3DSA:3.10.20.30 2 65 3.8E-25 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS20495 15f7d5a464ae99e299664e1c3a06614e 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 2 65 3.0E-23 T 25-04-2017 IPR010035 ThiS, thiamine-biosynthesis CLFO_RS20495 15f7d5a464ae99e299664e1c3a06614e 65 SUPERFAMILY SSF54285 2 64 2.04E-19 T 25-04-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLFO_RS21260 d27e94a59604675e3ae5d210311b5f2a 1194 SUPERFAMILY SSF53335 65 264 1.84E-64 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS21260 d27e94a59604675e3ae5d210311b5f2a 1194 SUPERFAMILY SSF53335 307 388 1.84E-64 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS21260 d27e94a59604675e3ae5d210311b5f2a 1194 SUPERFAMILY SSF53335 490 661 1.84E-64 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS21260 d27e94a59604675e3ae5d210311b5f2a 1194 Gene3D G3DSA:3.40.50.150 484 612 3.9E-46 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS21260 d27e94a59604675e3ae5d210311b5f2a 1194 Gene3D G3DSA:3.40.50.150 247 264 3.9E-46 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS21260 d27e94a59604675e3ae5d210311b5f2a 1194 Gene3D G3DSA:3.40.50.150 307 398 3.9E-46 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS21260 d27e94a59604675e3ae5d210311b5f2a 1194 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 492 504 1.4E-9 T 25-04-2017 CLFO_RS21260 d27e94a59604675e3ae5d210311b5f2a 1194 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 311 325 1.4E-9 T 25-04-2017 CLFO_RS21260 d27e94a59604675e3ae5d210311b5f2a 1194 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 525 549 1.4E-9 T 25-04-2017 CLFO_RS21260 d27e94a59604675e3ae5d210311b5f2a 1194 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 245 261 1.4E-9 T 25-04-2017 CLFO_RS00965 25f91bf3ec06e96ae2b0ca126663e5c6 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 209 5.8E-91 T 25-04-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CLFO_RS00965 25f91bf3ec06e96ae2b0ca126663e5c6 209 SUPERFAMILY SSF53271 4 207 1.44E-73 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS00965 25f91bf3ec06e96ae2b0ca126663e5c6 209 Gene3D G3DSA:3.40.50.2020 3 209 2.8E-85 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS00965 25f91bf3ec06e96ae2b0ca126663e5c6 209 Pfam PF14681 Uracil phosphoribosyltransferase 7 208 2.2E-76 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS00965 25f91bf3ec06e96ae2b0ca126663e5c6 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 47.758 T 25-04-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CLFO_RS09745 a60c07295310c0232292eca451022ac5 271 SUPERFAMILY SSF53335 59 242 8.64E-21 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS09745 a60c07295310c0232292eca451022ac5 271 SUPERFAMILY SSF55174 3 69 2.36E-13 T 25-04-2017 CLFO_RS09745 a60c07295310c0232292eca451022ac5 271 PIRSF PIRSF005578 1 263 5.3E-104 T 25-04-2017 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 CLFO_RS09745 a60c07295310c0232292eca451022ac5 271 SMART SM00363 4 69 5.7E-9 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS09745 a60c07295310c0232292eca451022ac5 271 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 237 4.5E-86 T 25-04-2017 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 CLFO_RS09745 a60c07295310c0232292eca451022ac5 271 Pfam PF01728 FtsJ-like methyltransferase 60 242 5.8E-20 T 25-04-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CLFO_RS09745 a60c07295310c0232292eca451022ac5 271 Gene3D G3DSA:3.40.50.150 90 182 3.1E-4 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS09745 a60c07295310c0232292eca451022ac5 271 Pfam PF01479 S4 domain 5 46 2.5E-10 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS09745 a60c07295310c0232292eca451022ac5 271 Gene3D G3DSA:3.10.290.10 5 89 1.7E-21 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS04195 cf924fde67f290853cf992027e0da445 292 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 251 2.5E-31 T 25-04-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CLFO_RS04195 cf924fde67f290853cf992027e0da445 292 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 25-04-2017 IPR000150 Cof protein GO:0016787 CLFO_RS04195 cf924fde67f290853cf992027e0da445 292 Gene3D G3DSA:3.40.50.1000 197 283 4.5E-56 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS04195 cf924fde67f290853cf992027e0da445 292 Gene3D G3DSA:3.40.50.1000 1 73 4.5E-56 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS04195 cf924fde67f290853cf992027e0da445 292 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 278 1.1E-59 T 25-04-2017 IPR000150 Cof protein GO:0016787 CLFO_RS04195 cf924fde67f290853cf992027e0da445 292 ProSitePatterns PS01229 Hypothetical cof family signature 2. 232 254 - T 25-04-2017 CLFO_RS04195 cf924fde67f290853cf992027e0da445 292 SUPERFAMILY SSF56784 154 280 1.48E-67 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS04195 cf924fde67f290853cf992027e0da445 292 SUPERFAMILY SSF56784 1 123 1.48E-67 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS04195 cf924fde67f290853cf992027e0da445 292 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 278 4.1E-64 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS04195 cf924fde67f290853cf992027e0da445 292 Gene3D G3DSA:3.30.1240.10 84 196 3.5E-8 T 25-04-2017 CLFO_RS04215 6ce30cf051e05b6d4a885ab414c7f4f6 340 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 16 336 51.159 T 25-04-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CLFO_RS04215 6ce30cf051e05b6d4a885ab414c7f4f6 340 SUPERFAMILY SSF55681 20 333 1.49E-98 T 25-04-2017 CLFO_RS04215 6ce30cf051e05b6d4a885ab414c7f4f6 340 Gene3D G3DSA:3.30.930.10 17 335 6.8E-159 T 25-04-2017 CLFO_RS04215 6ce30cf051e05b6d4a885ab414c7f4f6 340 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 27 330 2.1E-110 T 25-04-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CLFO_RS04215 6ce30cf051e05b6d4a885ab414c7f4f6 340 PIRSF PIRSF001555 12 340 5.5E-163 T 25-04-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CLFO_RS04215 6ce30cf051e05b6d4a885ab414c7f4f6 340 Pfam PF03590 Aspartate-ammonia ligase 26 250 3.2E-111 T 25-04-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CLFO_RS10030 2f4b913f6865973d912d0b30e4c55826 442 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 253 264 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS10030 2f4b913f6865973d912d0b30e4c55826 442 SUPERFAMILY SSF46548 251 328 5.58E-10 T 25-04-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 CLFO_RS10030 2f4b913f6865973d912d0b30e4c55826 442 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 9 150 2.0E-44 T 25-04-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS10030 2f4b913f6865973d912d0b30e4c55826 442 Pfam PF13375 RnfC Barrel sandwich hybrid domain 371 435 6.2E-16 T 25-04-2017 IPR026902 RnfC Barrel sandwich hybrid domain CLFO_RS10030 2f4b913f6865973d912d0b30e4c55826 442 Gene3D G3DSA:2.40.50.100 395 432 5.2E-6 T 25-04-2017 CLFO_RS10030 2f4b913f6865973d912d0b30e4c55826 442 Pfam PF10531 SLBB domain 162 208 3.7E-9 T 25-04-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS10030 2f4b913f6865973d912d0b30e4c55826 442 Pfam PF13534 4Fe-4S dicluster domain 252 312 5.6E-9 T 25-04-2017 CLFO_RS10030 2f4b913f6865973d912d0b30e4c55826 442 Gene3D G3DSA:1.10.1060.10 198 329 1.0E-9 T 25-04-2017 CLFO_RS10030 2f4b913f6865973d912d0b30e4c55826 442 SUPERFAMILY SSF142984 161 230 1.24E-12 T 25-04-2017 CLFO_RS10030 2f4b913f6865973d912d0b30e4c55826 442 SUPERFAMILY SSF51230 382 432 1.14E-5 T 25-04-2017 IPR011053 Single hybrid motif CLFO_RS10030 2f4b913f6865973d912d0b30e4c55826 442 SUPERFAMILY SSF142019 3 168 1.31E-44 T 25-04-2017 CLFO_RS10030 2f4b913f6865973d912d0b30e4c55826 442 PIRSF PIRSF036408 1 441 7.3E-179 T 25-04-2017 IPR017054 Propanediol utilization protein, PduS, predicted CLFO_RS15945 3c5e54b6b693d8ae979a6b9efb3cc9bc 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 1.8E-46 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15945 3c5e54b6b693d8ae979a6b9efb3cc9bc 317 SUPERFAMILY SSF161098 93 294 1.01E-22 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15945 3c5e54b6b693d8ae979a6b9efb3cc9bc 317 Gene3D G3DSA:1.10.3720.10 95 304 5.5E-23 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS09120 da13106315d16b01925ae7c32df816f6 420 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 41 146 9.1E-13 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS09120 da13106315d16b01925ae7c32df816f6 420 Pfam PF16193 AAA C-terminal domain 175 253 1.4E-20 T 25-04-2017 IPR032423 AAA ATPase, C-terminal domain CLFO_RS09120 da13106315d16b01925ae7c32df816f6 420 Gene3D G3DSA:1.20.272.10 235 332 1.1E-35 T 25-04-2017 CLFO_RS09120 da13106315d16b01925ae7c32df816f6 420 SUPERFAMILY SSF52540 2 232 1.11E-41 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09120 da13106315d16b01925ae7c32df816f6 420 Pfam PF12002 MgsA AAA+ ATPase C terminal 254 417 2.2E-58 T 25-04-2017 IPR021886 MgsA AAA+ ATPase C-terminal CLFO_RS09120 da13106315d16b01925ae7c32df816f6 420 Gene3D G3DSA:3.40.50.300 2 142 2.6E-26 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09120 da13106315d16b01925ae7c32df816f6 420 Gene3D G3DSA:1.10.8.60 143 207 2.0E-11 T 25-04-2017 CLFO_RS09120 da13106315d16b01925ae7c32df816f6 420 SMART SM00382 37 155 5.4E-8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS09120 da13106315d16b01925ae7c32df816f6 420 SUPERFAMILY SSF48019 239 418 1.42E-61 T 25-04-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CLFO_RS09120 da13106315d16b01925ae7c32df816f6 420 Gene3D G3DSA:1.10.3710.10 334 419 8.5E-25 T 25-04-2017 CLFO_RS19995 ff1cc7320bab402c39b6ef514d6f17d1 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 376 1.6E-168 T 25-04-2017 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CLFO_RS19995 ff1cc7320bab402c39b6ef514d6f17d1 376 PIRSF PIRSF015658 1 376 1.8E-180 T 25-04-2017 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CLFO_RS19995 ff1cc7320bab402c39b6ef514d6f17d1 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 21 371 2.4E-160 T 25-04-2017 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CLFO_RS11905 e1b6d1758520abc653bccac56b565f1a 76 Pfam PF07866 Protein of unknown function (DUF1653) 7 66 2.0E-30 T 25-04-2017 IPR023387 DUF1653-like domain CLFO_RS11905 e1b6d1758520abc653bccac56b565f1a 76 Gene3D G3DSA:2.30.30.320 4 72 4.5E-32 T 25-04-2017 IPR023387 DUF1653-like domain CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 227 272 2.3E-5 T 25-04-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 33 50 - T 25-04-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 Gene3D G3DSA:3.30.70.20 131 195 8.2E-15 T 25-04-2017 CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 SMART SM00929 85 125 5.2E-16 T 25-04-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 SUPERFAMILY SSF54292 4 76 1.85E-21 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 Pfam PF14697 4Fe-4S dicluster domain 144 204 9.0E-9 T 25-04-2017 CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 Gene3D G3DSA:3.30.70.20 196 230 2.6E-6 T 25-04-2017 CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 121 2.8E-17 T 25-04-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 Gene3D G3DSA:3.10.20.30 3 57 1.3E-9 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 SUPERFAMILY SSF54862 79 215 1.13E-35 T 25-04-2017 CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 SUPERFAMILY SSF53706 189 296 6.44E-17 T 25-04-2017 CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 78 2.4E-21 T 25-04-2017 CLFO_RS17645 22d5c9ec7e4dea879238f6d23414d976 306 Gene3D G3DSA:2.20.25.90 231 273 1.8E-7 T 25-04-2017 CLFO_RS13980 29b962e28584790c31ba0a239468f0bb 208 Pfam PF04343 Protein of unknown function, DUF488 12 127 1.1E-18 T 25-04-2017 IPR007438 Protein of unknown function DUF488 CLFO_RS20075 a2ef37cadf657cbf479c2863db94d088 384 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 25-04-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLFO_RS20075 a2ef37cadf657cbf479c2863db94d088 384 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 261 281 - T 25-04-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLFO_RS20075 a2ef37cadf657cbf479c2863db94d088 384 Gene3D G3DSA:1.20.1090.10 186 384 6.4E-80 T 25-04-2017 CLFO_RS20075 a2ef37cadf657cbf479c2863db94d088 384 SUPERFAMILY SSF56796 4 383 4.06E-138 T 25-04-2017 CLFO_RS20075 a2ef37cadf657cbf479c2863db94d088 384 Gene3D G3DSA:3.40.50.1970 5 185 2.0E-61 T 25-04-2017 CLFO_RS20075 a2ef37cadf657cbf479c2863db94d088 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 376 1.4E-128 T 25-04-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLFO_RS00690 fc20596be627da97812ecdf81bbcb1b4 304 SUPERFAMILY SSF53448 1 286 7.89E-91 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00690 fc20596be627da97812ecdf81bbcb1b4 304 Gene3D G3DSA:3.90.550.10 1 265 1.1E-68 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00690 fc20596be627da97812ecdf81bbcb1b4 304 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.6E-149 T 25-04-2017 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CLFO_RS00690 fc20596be627da97812ecdf81bbcb1b4 304 Pfam PF00483 Nucleotidyl transferase 2 238 7.6E-70 T 25-04-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLFO_RS11170 1e7939793d3c0ff7e05f6229b8f7d839 177 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 4 177 39.036 T 25-04-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CLFO_RS11170 1e7939793d3c0ff7e05f6229b8f7d839 177 SUPERFAMILY SSF56235 2 176 1.04E-51 T 25-04-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CLFO_RS11170 1e7939793d3c0ff7e05f6229b8f7d839 177 PIRSF PIRSF039093 1 177 6.5E-78 T 25-04-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CLFO_RS11170 1e7939793d3c0ff7e05f6229b8f7d839 177 Pfam PF00227 Proteasome subunit 2 175 8.8E-22 T 25-04-2017 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 CLFO_RS11170 1e7939793d3c0ff7e05f6229b8f7d839 177 Gene3D G3DSA:3.60.20.10 5 177 6.6E-74 T 25-04-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CLFO_RS11170 1e7939793d3c0ff7e05f6229b8f7d839 177 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 5 177 1.4E-77 T 25-04-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CLFO_RS00710 22bb1f49898e52f0c719801043419145 396 Pfam PF00005 ABC transporter 43 175 2.3E-21 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS00710 22bb1f49898e52f0c719801043419145 396 Pfam PF14524 Wzt C-terminal domain 262 387 2.4E-18 T 25-04-2017 IPR029439 Wzt, C-terminal CLFO_RS00710 22bb1f49898e52f0c719801043419145 396 SMART SM00382 52 275 9.7E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS00710 22bb1f49898e52f0c719801043419145 396 Gene3D G3DSA:3.40.50.300 6 260 5.2E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00710 22bb1f49898e52f0c719801043419145 396 SUPERFAMILY SSF52540 34 239 2.33E-45 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00710 22bb1f49898e52f0c719801043419145 396 Gene3D G3DSA:2.70.50.60 263 382 6.2E-12 T 25-04-2017 CLFO_RS10565 e243bb1328d9d4b0dda314a6ec2ba420 249 SMART SM00382 99 225 0.0012 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS10565 e243bb1328d9d4b0dda314a6ec2ba420 249 PIRSF PIRSF003073 11 249 3.4E-32 T 25-04-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CLFO_RS10565 e243bb1328d9d4b0dda314a6ec2ba420 249 Pfam PF01695 IstB-like ATP binding protein 66 231 7.1E-22 T 25-04-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 CLFO_RS10565 e243bb1328d9d4b0dda314a6ec2ba420 249 SUPERFAMILY SSF52540 64 245 3.6E-21 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10565 e243bb1328d9d4b0dda314a6ec2ba420 249 Gene3D G3DSA:3.40.50.300 48 236 3.3E-41 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01375 14ed72f7854cecf8280bf84b2c578b42 405 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 7.5E-45 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS01375 14ed72f7854cecf8280bf84b2c578b42 405 PRINTS PR00207 Flagellin signature 109 132 7.6E-25 T 25-04-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLFO_RS01375 14ed72f7854cecf8280bf84b2c578b42 405 PRINTS PR00207 Flagellin signature 35 52 7.6E-25 T 25-04-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLFO_RS01375 14ed72f7854cecf8280bf84b2c578b42 405 PRINTS PR00207 Flagellin signature 74 93 7.6E-25 T 25-04-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLFO_RS01375 14ed72f7854cecf8280bf84b2c578b42 405 Gene3D G3DSA:1.20.1330.10 52 138 5.8E-67 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS01375 14ed72f7854cecf8280bf84b2c578b42 405 Gene3D G3DSA:1.20.1330.10 275 361 5.8E-67 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS01375 14ed72f7854cecf8280bf84b2c578b42 405 Pfam PF00700 Bacterial flagellin C-terminal helical region 319 404 2.4E-27 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS01375 14ed72f7854cecf8280bf84b2c578b42 405 SUPERFAMILY SSF64518 281 404 7.59E-100 T 25-04-2017 CLFO_RS01375 14ed72f7854cecf8280bf84b2c578b42 405 SUPERFAMILY SSF64518 1 238 7.59E-100 T 25-04-2017 CLFO_RS15540 c01a306cd9f93f67af93059db4fea99e 168 Pfam PF12682 Flavodoxin 9 134 8.4E-13 T 25-04-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLFO_RS15540 c01a306cd9f93f67af93059db4fea99e 168 ProSitePatterns PS00201 Flavodoxin signature. 12 28 - T 25-04-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLFO_RS15540 c01a306cd9f93f67af93059db4fea99e 168 SUPERFAMILY SSF52218 9 164 8.11E-20 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS15540 c01a306cd9f93f67af93059db4fea99e 168 Gene3D G3DSA:3.40.50.360 9 135 3.8E-16 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Gene3D G3DSA:3.30.230.70 2 221 1.1E-83 T 25-04-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Gene3D G3DSA:3.30.230.70 312 539 3.9E-86 T 25-04-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 SUPERFAMILY SSF54211 4 142 1.92E-48 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Gene3D G3DSA:2.40.50.140 616 691 4.4E-28 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 SUPERFAMILY SSF54211 290 484 8.1E-48 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 688 0.0 T 25-04-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 SUPERFAMILY SSF55666 450 557 6.68E-27 T 25-04-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Pfam PF01138 3' exoribonuclease family, domain 1 14 142 1.5E-18 T 25-04-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Pfam PF01138 3' exoribonuclease family, domain 1 320 453 6.2E-18 T 25-04-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 PIRSF PIRSF005499 1 707 0.0 T 25-04-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 SMART SM00322 549 614 9.7E-13 T 25-04-2017 IPR004087 K Homology domain GO:0003676 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 239 316 1.6E-13 T 25-04-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Pfam PF03725 3' exoribonuclease family, domain 2 457 524 1.8E-5 T 25-04-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 1.3E-14 T 25-04-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Pfam PF00575 S1 RNA binding domain 615 687 8.1E-21 T 25-04-2017 IPR003029 S1 domain GO:0003676 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 SUPERFAMILY SSF50249 617 700 5.3E-23 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 SUPERFAMILY SSF54791 551 637 3.79E-24 T 25-04-2017 IPR004088 K Homology domain, type 1 GO:0003723 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Gene3D G3DSA:3.30.1370.10 548 615 1.4E-26 T 25-04-2017 IPR004088 K Homology domain, type 1 GO:0003723 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 SUPERFAMILY SSF55666 143 234 6.28E-28 T 25-04-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Pfam PF00013 KH domain 553 610 5.0E-10 T 25-04-2017 IPR004088 K Homology domain, type 1 GO:0003723 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 SUPERFAMILY SSF46915 236 318 1.28E-17 T 25-04-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 SMART SM00316 617 687 1.0E-26 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 690 31.164 T 25-04-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLFO_RS10850 1bba816afa4485e1f05e6372cbdab050 707 Gene3D G3DSA:1.10.10.400 224 311 6.2E-25 T 25-04-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CLFO_RS13100 ff9365198a8b62b143fe579d878743ae 490 Gene3D G3DSA:3.30.420.40 2 244 2.6E-77 T 25-04-2017 CLFO_RS13100 ff9365198a8b62b143fe579d878743ae 490 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 350 370 - T 25-04-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLFO_RS13100 ff9365198a8b62b143fe579d878743ae 490 SUPERFAMILY SSF53067 2 246 7.89E-81 T 25-04-2017 CLFO_RS13100 ff9365198a8b62b143fe579d878743ae 490 TIGRFAM TIGR01312 XylB: xylulokinase 4 479 9.2E-182 T 25-04-2017 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 CLFO_RS13100 ff9365198a8b62b143fe579d878743ae 490 Gene3D G3DSA:3.30.420.40 247 487 5.1E-60 T 25-04-2017 CLFO_RS13100 ff9365198a8b62b143fe579d878743ae 490 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 129 141 - T 25-04-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLFO_RS13100 ff9365198a8b62b143fe579d878743ae 490 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 2 244 4.9E-85 T 25-04-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CLFO_RS13100 ff9365198a8b62b143fe579d878743ae 490 SUPERFAMILY SSF53067 246 485 1.3E-65 T 25-04-2017 CLFO_RS13100 ff9365198a8b62b143fe579d878743ae 490 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 255 436 1.7E-38 T 25-04-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CLFO_RS13100 ff9365198a8b62b143fe579d878743ae 490 PIRSF PIRSF000538 1 490 1.2E-172 T 25-04-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLFO_RS19335 f6a4fc2349f932b5f903318726584eb3 198 SUPERFAMILY SSF52218 1 197 2.51E-33 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS19335 f6a4fc2349f932b5f903318726584eb3 198 Pfam PF03358 NADPH-dependent FMN reductase 3 111 8.2E-20 T 25-04-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLFO_RS19335 f6a4fc2349f932b5f903318726584eb3 198 Gene3D G3DSA:3.40.50.360 1 193 3.4E-41 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS18205 42bc52562876889324566009c24e868c 645 SMART SM00642 152 512 3.0E-7 T 25-04-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLFO_RS18205 42bc52562876889324566009c24e868c 645 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 4 627 43.169 T 25-04-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CLFO_RS18205 42bc52562876889324566009c24e868c 645 Gene3D G3DSA:2.60.40.1180 526 625 1.4E-32 T 25-04-2017 IPR013780 Glycosyl hydrolase, all-beta CLFO_RS18205 42bc52562876889324566009c24e868c 645 SUPERFAMILY SSF51445 134 522 5.28E-109 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS18205 42bc52562876889324566009c24e868c 645 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 26 108 1.8E-20 T 25-04-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CLFO_RS18205 42bc52562876889324566009c24e868c 645 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 12 624 9.8E-279 T 25-04-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CLFO_RS18205 42bc52562876889324566009c24e868c 645 PIRSF PIRSF000463 1 637 2.5E-279 T 25-04-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 CLFO_RS18205 42bc52562876889324566009c24e868c 645 Pfam PF00128 Alpha amylase, catalytic domain 178 251 2.0E-11 T 25-04-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLFO_RS18205 42bc52562876889324566009c24e868c 645 Gene3D G3DSA:3.20.20.80 138 513 1.5E-92 T 25-04-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLFO_RS18205 42bc52562876889324566009c24e868c 645 SUPERFAMILY SSF51011 526 626 1.53E-30 T 25-04-2017 CLFO_RS18205 42bc52562876889324566009c24e868c 645 SUPERFAMILY SSF81296 19 127 2.27E-30 T 25-04-2017 IPR014756 Immunoglobulin E-set CLFO_RS18205 42bc52562876889324566009c24e868c 645 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 530 625 4.6E-20 T 25-04-2017 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CLFO_RS18205 42bc52562876889324566009c24e868c 645 Gene3D G3DSA:2.60.40.10 14 122 1.3E-36 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 484 4.0E-25 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 Gene3D G3DSA:1.10.287.130 251 322 4.3E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 SMART SM00304 199 251 2.3E-13 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 SUPERFAMILY SSF47384 245 327 1.55E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 SUPERFAMILY SSF158472 200 247 2.62E-11 T 25-04-2017 CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 2.1E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 2.1E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 2.1E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 2.1E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 SUPERFAMILY SSF55874 315 485 8.91E-43 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 Gene3D G3DSA:3.30.565.10 333 482 6.7E-43 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 SMART SM00388 259 326 5.1E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 324 1.3E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 Pfam PF00672 HAMP domain 181 247 3.8E-16 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS15625 a6c86d293d872f666d0d0a98039941ce 491 SMART SM00387 373 486 9.9E-37 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS02180 f4ad082f62b84ae1e93a896c30ee997a 257 PIRSF PIRSF012294 1 257 4.2E-89 T 25-04-2017 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type GO:0005524|GO:0006580|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CLFO_RS02180 f4ad082f62b84ae1e93a896c30ee997a 257 SUPERFAMILY SSF89028 92 250 6.28E-11 T 25-04-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CLFO_RS02180 f4ad082f62b84ae1e93a896c30ee997a 257 Gene3D G3DSA:1.20.1200.10 93 248 3.3E-11 T 25-04-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CLFO_RS02180 f4ad082f62b84ae1e93a896c30ee997a 257 Pfam PF01923 Cobalamin adenosyltransferase 93 249 3.6E-13 T 25-04-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CLFO_RS19760 cbebef32e6f50aff152a997862180482 232 PIRSF PIRSF002155 1 228 4.6E-86 T 25-04-2017 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19760 cbebef32e6f50aff152a997862180482 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 140 - T 25-04-2017 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19760 cbebef32e6f50aff152a997862180482 232 Gene3D G3DSA:3.30.190.20 17 68 1.0E-50 T 25-04-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CLFO_RS19760 cbebef32e6f50aff152a997862180482 232 Gene3D G3DSA:3.30.190.20 162 227 1.0E-50 T 25-04-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CLFO_RS19760 cbebef32e6f50aff152a997862180482 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 230 44.979 T 25-04-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CLFO_RS19760 cbebef32e6f50aff152a997862180482 232 Gene3D G3DSA:3.40.50.790 69 160 9.4E-43 T 25-04-2017 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CLFO_RS19760 cbebef32e6f50aff152a997862180482 232 Pfam PF00687 Ribosomal protein L1p/L10e family 30 221 5.2E-60 T 25-04-2017 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CLFO_RS19760 cbebef32e6f50aff152a997862180482 232 SUPERFAMILY SSF56808 6 227 9.42E-88 T 25-04-2017 IPR023674 Ribosomal protein L1-like CLFO_RS19760 cbebef32e6f50aff152a997862180482 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.4E-106 T 25-04-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CLFO_RS05805 5d5d3ab77525ac4624efd077c2a31c41 251 SUPERFAMILY SSF52540 7 247 3.02E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05805 5d5d3ab77525ac4624efd077c2a31c41 251 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 247 3.2E-7 T 25-04-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLFO_RS05805 5d5d3ab77525ac4624efd077c2a31c41 251 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 7 248 4.4E-107 T 25-04-2017 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD CLFO_RS05805 5d5d3ab77525ac4624efd077c2a31c41 251 Pfam PF00005 ABC transporter 24 178 4.4E-27 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS05805 5d5d3ab77525ac4624efd077c2a31c41 251 Gene3D G3DSA:3.40.50.300 4 245 1.6E-57 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 SMART SM00116 378 425 1.4E-14 T 25-04-2017 IPR000644 CBS domain CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 SMART SM00116 316 363 1.1E-6 T 25-04-2017 IPR000644 CBS domain CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 Pfam PF00571 CBS domain 371 425 9.3E-16 T 25-04-2017 IPR000644 CBS domain CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 Pfam PF00571 CBS domain 309 362 2.2E-9 T 25-04-2017 IPR000644 CBS domain CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 SUPERFAMILY SSF54631 306 427 1.77E-34 T 25-04-2017 CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 Gene3D G3DSA:3.20.20.70 260 456 5.3E-38 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 Gene3D G3DSA:1.10.3090.10 599 791 2.1E-28 T 25-04-2017 CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 SUPERFAMILY SSF81891 600 863 1.44E-36 T 25-04-2017 CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 Pfam PF01743 Poly A polymerase head domain 475 602 2.3E-31 T 25-04-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 SUPERFAMILY SSF81301 452 599 7.41E-33 T 25-04-2017 CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 Gene3D G3DSA:3.30.460.10 457 598 1.2E-37 T 25-04-2017 CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 SUPERFAMILY SSF64182 3 289 1.27E-48 T 25-04-2017 CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 627 688 1.2E-6 T 25-04-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 Gene3D G3DSA:3.90.1640.10 3 181 1.7E-30 T 25-04-2017 CLFO_RS09850 78b7902a861bb5363761fe275c36fa98 873 Pfam PF01368 DHH family 3 144 1.4E-12 T 25-04-2017 IPR001667 DDH domain CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 Pfam PF00575 S1 RNA binding domain 21 91 1.0E-15 T 25-04-2017 IPR003029 S1 domain GO:0003676 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 Pfam PF00575 S1 RNA binding domain 279 349 1.5E-20 T 25-04-2017 IPR003029 S1 domain GO:0003676 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 Pfam PF00575 S1 RNA binding domain 193 264 1.3E-24 T 25-04-2017 IPR003029 S1 domain GO:0003676 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 Pfam PF00575 S1 RNA binding domain 111 175 1.9E-7 T 25-04-2017 IPR003029 S1 domain GO:0003676 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 Gene3D G3DSA:2.40.50.140 196 274 5.0E-32 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 Gene3D G3DSA:2.40.50.140 22 103 8.9E-18 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 SMART SM00316 20 91 2.2E-15 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 SMART SM00316 279 350 2.1E-25 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 SMART SM00316 194 264 5.4E-28 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 SMART SM00316 107 175 0.017 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 SUPERFAMILY SSF50249 110 188 4.0E-12 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 SUPERFAMILY SSF50249 4 116 7.86E-23 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 PRINTS PR00681 Ribosomal protein S1 signature 216 237 2.1E-56 T 25-04-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 PRINTS PR00681 Ribosomal protein S1 signature 112 128 2.1E-56 T 25-04-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 PRINTS PR00681 Ribosomal protein S1 signature 40 54 2.1E-56 T 25-04-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 PRINTS PR00681 Ribosomal protein S1 signature 333 351 2.1E-56 T 25-04-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 PRINTS PR00681 Ribosomal protein S1 signature 22 40 2.1E-56 T 25-04-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 PRINTS PR00681 Ribosomal protein S1 signature 88 107 2.1E-56 T 25-04-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 PRINTS PR00681 Ribosomal protein S1 signature 130 147 2.1E-56 T 25-04-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 PRINTS PR00681 Ribosomal protein S1 signature 159 179 2.1E-56 T 25-04-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 PRINTS PR00681 Ribosomal protein S1 signature 294 313 2.1E-56 T 25-04-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 SUPERFAMILY SSF50249 259 372 1.59E-25 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 Gene3D G3DSA:2.40.50.140 104 175 2.2E-12 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 Gene3D G3DSA:2.40.50.140 275 355 2.7E-28 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10680 9f51abcfe64da2e4c279e8b5a93f4ad6 388 SUPERFAMILY SSF50249 194 278 3.65E-27 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS05465 743dfd598da4ef1c6229bacd06dd3c85 128 Pfam PF02082 Transcriptional regulator 3 77 6.9E-23 T 25-04-2017 IPR000944 Transcription regulator Rrf2-type CLFO_RS05465 743dfd598da4ef1c6229bacd06dd3c85 128 SUPERFAMILY SSF46785 2 125 1.0E-29 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS05465 743dfd598da4ef1c6229bacd06dd3c85 128 Gene3D G3DSA:1.10.10.10 3 126 1.4E-31 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS05465 743dfd598da4ef1c6229bacd06dd3c85 128 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 122 2.4E-26 T 25-04-2017 IPR000944 Transcription regulator Rrf2-type CLFO_RS08335 03b240f32d494938592731d9e8ccb578 471 Gene3D G3DSA:3.20.20.370 273 463 2.5E-61 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS08335 03b240f32d494938592731d9e8ccb578 471 Gene3D G3DSA:3.20.20.370 7 33 2.5E-61 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS08335 03b240f32d494938592731d9e8ccb578 471 Pfam PF01522 Polysaccharide deacetylase 280 399 1.1E-29 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS08335 03b240f32d494938592731d9e8ccb578 471 SUPERFAMILY SSF88713 274 463 1.33E-57 T 25-04-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLFO_RS13695 cbec0dcdd42d94af810de680b3570b4d 228 SMART SM00862 151 227 1.1E-24 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS13695 cbec0dcdd42d94af810de680b3570b4d 228 SUPERFAMILY SSF46894 130 227 2.55E-29 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS13695 cbec0dcdd42d94af810de680b3570b4d 228 SUPERFAMILY SSF52172 2 123 1.2E-39 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS13695 cbec0dcdd42d94af810de680b3570b4d 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 1.5E-26 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS13695 cbec0dcdd42d94af810de680b3570b4d 228 Pfam PF00072 Response regulator receiver domain 4 113 6.3E-29 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13695 cbec0dcdd42d94af810de680b3570b4d 228 Gene3D G3DSA:1.10.10.10 153 227 1.8E-31 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13695 cbec0dcdd42d94af810de680b3570b4d 228 Gene3D G3DSA:3.40.50.2300 2 152 3.9E-39 T 25-04-2017 CLFO_RS13695 cbec0dcdd42d94af810de680b3570b4d 228 SMART SM00448 2 112 7.9E-43 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS09395 ea7e9de7bc9207ba3bbdb93d72826950 180 Pfam PF01625 Peptide methionine sulfoxide reductase 3 153 3.7E-65 T 25-04-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CLFO_RS09395 ea7e9de7bc9207ba3bbdb93d72826950 180 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 152 6.6E-63 T 25-04-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CLFO_RS09395 ea7e9de7bc9207ba3bbdb93d72826950 180 Gene3D G3DSA:3.30.1060.10 1 153 2.2E-70 T 25-04-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CLFO_RS09395 ea7e9de7bc9207ba3bbdb93d72826950 180 SUPERFAMILY SSF55068 1 159 1.29E-69 T 25-04-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CLFO_RS09395 ea7e9de7bc9207ba3bbdb93d72826950 180 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 158 37.933 T 25-04-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CLFO_RS21425 b4f47afb4d9a4b8bb1759d431afbec9d 217 PRINTS PR01900 YidC translocation/secretion protein signature 162 186 2.9E-8 T 25-04-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CLFO_RS21425 b4f47afb4d9a4b8bb1759d431afbec9d 217 PRINTS PR01900 YidC translocation/secretion protein signature 7 23 2.9E-8 T 25-04-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CLFO_RS21425 b4f47afb4d9a4b8bb1759d431afbec9d 217 PRINTS PR01900 YidC translocation/secretion protein signature 140 155 2.9E-8 T 25-04-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CLFO_RS21425 b4f47afb4d9a4b8bb1759d431afbec9d 217 Pfam PF02096 60Kd inner membrane protein 22 207 6.3E-67 T 25-04-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CLFO_RS21425 b4f47afb4d9a4b8bb1759d431afbec9d 217 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 22 207 1.2E-67 T 25-04-2017 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 Gene3D G3DSA:1.10.560.10 3 194 3.9E-50 T 25-04-2017 IPR027413 GroEL-like equatorial domain CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 SUPERFAMILY SSF48592 404 520 1.08E-82 T 25-04-2017 CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 SUPERFAMILY SSF48592 5 133 1.08E-82 T 25-04-2017 CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 526 4.1E-259 T 25-04-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 SUPERFAMILY SSF54849 137 203 1.58E-25 T 25-04-2017 CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 Hamap MF_00600 60 kDa chaperonin [groL]. 1 538 42.418 T 25-04-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 Gene3D G3DSA:1.10.560.10 366 517 4.2E-45 T 25-04-2017 IPR027413 GroEL-like equatorial domain CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 PRINTS PR00298 60kDa chaperonin signature 396 417 9.1E-74 T 25-04-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 PRINTS PR00298 60kDa chaperonin signature 82 109 9.1E-74 T 25-04-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 PRINTS PR00298 60kDa chaperonin signature 348 373 9.1E-74 T 25-04-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 PRINTS PR00298 60kDa chaperonin signature 26 52 9.1E-74 T 25-04-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 PRINTS PR00298 60kDa chaperonin signature 266 289 9.1E-74 T 25-04-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 SUPERFAMILY SSF52029 183 374 1.64E-85 T 25-04-2017 IPR027409 GroEL-like apical domain CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 25-04-2017 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 Gene3D G3DSA:3.50.7.10 195 365 1.6E-97 T 25-04-2017 IPR027409 GroEL-like apical domain CLFO_RS01935 c6777b850579d25598c81460e40f1f4f 541 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 523 2.3E-104 T 25-04-2017 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CLFO_RS06760 a4067379c3edaee064648dbf14319617 424 Pfam PF01546 Peptidase family M20/M25/M40 104 415 1.7E-33 T 25-04-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLFO_RS06760 a4067379c3edaee064648dbf14319617 424 Gene3D G3DSA:3.40.630.10 12 219 1.8E-59 T 25-04-2017 CLFO_RS06760 a4067379c3edaee064648dbf14319617 424 Gene3D G3DSA:3.40.630.10 359 420 1.8E-59 T 25-04-2017 CLFO_RS06760 a4067379c3edaee064648dbf14319617 424 Pfam PF07687 Peptidase dimerisation domain 207 318 6.6E-18 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS06760 a4067379c3edaee064648dbf14319617 424 Gene3D G3DSA:3.30.70.360 220 317 1.6E-17 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS06760 a4067379c3edaee064648dbf14319617 424 SUPERFAMILY SSF55031 211 317 1.39E-11 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS06760 a4067379c3edaee064648dbf14319617 424 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 17 408 3.8E-83 T 25-04-2017 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase CLFO_RS06760 a4067379c3edaee064648dbf14319617 424 SUPERFAMILY SSF53187 1 210 1.71E-57 T 25-04-2017 CLFO_RS06760 a4067379c3edaee064648dbf14319617 424 SUPERFAMILY SSF53187 337 420 1.71E-57 T 25-04-2017 CLFO_RS19790 64b7309b11c6840f8310de0c0f2385d7 215 Gene3D G3DSA:1.10.10.10 160 207 4.1E-8 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS19790 64b7309b11c6840f8310de0c0f2385d7 215 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 16 211 3.4E-111 T 25-04-2017 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS19790 64b7309b11c6840f8310de0c0f2385d7 215 SUPERFAMILY SSF88946 18 106 1.57E-24 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS19790 64b7309b11c6840f8310de0c0f2385d7 215 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 61 74 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS19790 64b7309b11c6840f8310de0c0f2385d7 215 Pfam PF08281 Sigma-70, region 4 171 206 1.3E-6 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS19790 64b7309b11c6840f8310de0c0f2385d7 215 SUPERFAMILY SSF46894 147 207 2.72E-9 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS19790 64b7309b11c6840f8310de0c0f2385d7 215 Gene3D G3DSA:1.10.1740.10 18 128 1.4E-21 T 25-04-2017 CLFO_RS19790 64b7309b11c6840f8310de0c0f2385d7 215 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 210 2.3E-22 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS19790 64b7309b11c6840f8310de0c0f2385d7 215 Pfam PF04542 Sigma-70 region 2 37 106 1.4E-14 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS19790 64b7309b11c6840f8310de0c0f2385d7 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 178 205 - T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS19790 64b7309b11c6840f8310de0c0f2385d7 215 PIRSF PIRSF002939 4 215 8.2E-107 T 25-04-2017 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 CLFO_RS04160 6a439e220870177858c11fe9b06760fc 85 Gene3D G3DSA:3.40.30.10 1 77 3.2E-29 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS04160 6a439e220870177858c11fe9b06760fc 85 PRINTS PR00160 Glutaredoxin signature 45 58 1.3E-15 T 25-04-2017 IPR014025 Glutaredoxin subgroup CLFO_RS04160 6a439e220870177858c11fe9b06760fc 85 PRINTS PR00160 Glutaredoxin signature 59 72 1.3E-15 T 25-04-2017 IPR014025 Glutaredoxin subgroup CLFO_RS04160 6a439e220870177858c11fe9b06760fc 85 PRINTS PR00160 Glutaredoxin signature 3 21 1.3E-15 T 25-04-2017 IPR014025 Glutaredoxin subgroup CLFO_RS04160 6a439e220870177858c11fe9b06760fc 85 ProSitePatterns PS00195 Glutaredoxin active site. 5 21 - T 25-04-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CLFO_RS04160 6a439e220870177858c11fe9b06760fc 85 SUPERFAMILY SSF52833 2 81 2.57E-29 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS04160 6a439e220870177858c11fe9b06760fc 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 3 79 8.5E-30 T 25-04-2017 IPR011900 Glutaredoxin, GrxC GO:0045454 CLFO_RS04160 6a439e220870177858c11fe9b06760fc 85 Pfam PF00462 Glutaredoxin 3 62 4.5E-23 T 25-04-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CLFO_RS02160 33796d931f507ed33a350465986aa73c 217 SMART SM00877 145 214 2.9E-8 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS02160 33796d931f507ed33a350465986aa73c 217 SMART SM00877 34 121 2.3E-11 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS02160 33796d931f507ed33a350465986aa73c 217 SUPERFAMILY SSF143414 34 108 5.49E-6 T 25-04-2017 CLFO_RS02160 33796d931f507ed33a350465986aa73c 217 Pfam PF00936 BMC domain 35 106 5.2E-14 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS02160 33796d931f507ed33a350465986aa73c 217 SUPERFAMILY SSF143414 155 208 3.66E-5 T 25-04-2017 CLFO_RS02160 33796d931f507ed33a350465986aa73c 217 PIRSF PIRSF012290 1 217 3.5E-86 T 25-04-2017 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 CLFO_RS02160 33796d931f507ed33a350465986aa73c 217 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 4 217 1.2E-111 T 25-04-2017 IPR030983 Ethanolamine utilization protein EutL GO:0005198 CLFO_RS00180 e9c6606c83aca045eb5ee6f888d8b841 141 Gene3D G3DSA:2.40.50.140 1 124 3.9E-42 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS00180 e9c6606c83aca045eb5ee6f888d8b841 141 PIRSF PIRSF002070 1 139 5.9E-40 T 25-04-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CLFO_RS00180 e9c6606c83aca045eb5ee6f888d8b841 141 Pfam PF00436 Single-strand binding protein family 1 99 3.9E-36 T 25-04-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CLFO_RS00180 e9c6606c83aca045eb5ee6f888d8b841 141 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 113 2.3E-37 T 25-04-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CLFO_RS00180 e9c6606c83aca045eb5ee6f888d8b841 141 SUPERFAMILY SSF50249 1 114 3.77E-44 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS00180 e9c6606c83aca045eb5ee6f888d8b841 141 Hamap MF_00984 Single-stranded DNA-binding protein. 1 103 33.986 T 25-04-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CLFO_RS09285 a197e9e401f0e07f391f151dd5336789 316 Pfam PF00037 4Fe-4S binding domain 292 314 3.4E-6 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS09285 a197e9e401f0e07f391f151dd5336789 316 PRINTS PR00069 Aldo-keto reductase signature 94 112 1.5E-9 T 25-04-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLFO_RS09285 a197e9e401f0e07f391f151dd5336789 316 PRINTS PR00069 Aldo-keto reductase signature 42 66 1.5E-9 T 25-04-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLFO_RS09285 a197e9e401f0e07f391f151dd5336789 316 PRINTS PR00069 Aldo-keto reductase signature 128 145 1.5E-9 T 25-04-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLFO_RS09285 a197e9e401f0e07f391f151dd5336789 316 Gene3D G3DSA:3.30.70.20 247 315 4.6E-14 T 25-04-2017 CLFO_RS09285 a197e9e401f0e07f391f151dd5336789 316 SUPERFAMILY SSF51430 5 258 7.73E-45 T 25-04-2017 IPR023210 NADP-dependent oxidoreductase domain CLFO_RS09285 a197e9e401f0e07f391f151dd5336789 316 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 298 309 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS09285 a197e9e401f0e07f391f151dd5336789 316 SUPERFAMILY SSF54862 254 315 1.16E-13 T 25-04-2017 CLFO_RS09285 a197e9e401f0e07f391f151dd5336789 316 Pfam PF00248 Aldo/keto reductase family 15 212 2.6E-28 T 25-04-2017 IPR023210 NADP-dependent oxidoreductase domain CLFO_RS09285 a197e9e401f0e07f391f151dd5336789 316 Gene3D G3DSA:3.20.20.100 5 212 4.3E-37 T 25-04-2017 IPR023210 NADP-dependent oxidoreductase domain CLFO_RS04990 0ef6a394dbca14336d968ed0497966f3 70 Pfam PF01206 Sulfurtransferase TusA 5 70 2.1E-19 T 25-04-2017 IPR001455 TusA-like domain CLFO_RS04990 0ef6a394dbca14336d968ed0497966f3 70 SUPERFAMILY SSF64307 4 70 3.27E-17 T 25-04-2017 IPR001455 TusA-like domain CLFO_RS04990 0ef6a394dbca14336d968ed0497966f3 70 Gene3D G3DSA:3.30.110.40 3 70 2.4E-19 T 25-04-2017 IPR001455 TusA-like domain CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 17 496 43.593 T 25-04-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 SUPERFAMILY SSF55681 152 492 2.49E-118 T 25-04-2017 CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 Gene3D G3DSA:3.30.930.10 147 490 7.5E-120 T 25-04-2017 CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 Pfam PF00152 tRNA synthetases class II (D, K and N) 153 491 7.7E-79 T 25-04-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 Pfam PF01336 OB-fold nucleic acid binding domain 59 135 1.0E-15 T 25-04-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 12 493 3.0E-203 T 25-04-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 PIRSF PIRSF039101 1 498 1.2E-193 T 25-04-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 Gene3D G3DSA:2.40.50.140 12 145 3.5E-42 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 205 221 6.5E-39 T 25-04-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 234 247 6.5E-39 T 25-04-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 189 199 6.5E-39 T 25-04-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 376 392 6.5E-39 T 25-04-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 252 269 6.5E-39 T 25-04-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS19960 4b383b5ed8ed8af35b8d745c0b9d4494 498 SUPERFAMILY SSF50249 10 145 7.43E-37 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 Gene3D G3DSA:1.10.10.60 59 116 1.0E-20 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 SUPERFAMILY SSF46689 5 55 3.14E-8 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 SUPERFAMILY SSF46689 57 114 6.72E-13 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 SUPERFAMILY SSF55136 128 290 2.12E-32 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 Pfam PF06445 GyrI-like small molecule binding domain 128 287 3.4E-29 T 25-04-2017 IPR029442 GyrI-like small molecule binding domain CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 Gene3D G3DSA:1.10.10.60 1 58 1.0E-18 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 SMART SM00342 21 104 1.2E-29 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 Gene3D G3DSA:3.20.80.10 117 287 3.4E-30 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 3.2E-6 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 3.2E-6 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 Pfam PF12833 Helix-turn-helix domain 28 105 6.4E-19 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 SMART SM00871 128 288 2.2E-36 T 25-04-2017 IPR010499 Bacterial transcription activator, effector binding CLFO_RS16770 89aba8f1391f33602d071e632a8944b2 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS03885 30bafc1e762611ece72fd70ef1f17ebe 572 SUPERFAMILY SSF52016 383 571 1.1E-50 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS03885 30bafc1e762611ece72fd70ef1f17ebe 572 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 118 128 - T 25-04-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS03885 30bafc1e762611ece72fd70ef1f17ebe 572 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 470 481 - T 25-04-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS03885 30bafc1e762611ece72fd70ef1f17ebe 572 SUPERFAMILY SSF143975 10 381 1.83E-118 T 25-04-2017 CLFO_RS03885 30bafc1e762611ece72fd70ef1f17ebe 572 Pfam PF00920 Dehydratase family 30 569 9.2E-182 T 25-04-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS20505 ebea67fb987fcccfcbd1313a62ef5827 452 Hamap MF_01221 UPF0210 protein . 2 452 52.9 T 25-04-2017 IPR007841 Uncharacterised protein family UPF0210 CLFO_RS20505 ebea67fb987fcccfcbd1313a62ef5827 452 Gene3D G3DSA:3.20.70.20 1 452 5.7E-217 T 25-04-2017 CLFO_RS20505 ebea67fb987fcccfcbd1313a62ef5827 452 SUPERFAMILY SSF51998 3 447 4.85E-181 T 25-04-2017 CLFO_RS20505 ebea67fb987fcccfcbd1313a62ef5827 452 Pfam PF05167 Uncharacterised ACR (DUF711) 13 416 1.2E-183 T 25-04-2017 IPR007841 Uncharacterised protein family UPF0210 CLFO_RS01015 50b0d203280fa6e08196a18b28afc066 180 SUPERFAMILY SSF47928 3 105 6.28E-26 T 25-04-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 CLFO_RS01015 50b0d203280fa6e08196a18b28afc066 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 5 175 6.1E-49 T 25-04-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CLFO_RS01015 50b0d203280fa6e08196a18b28afc066 180 Gene3D G3DSA:1.10.520.20 5 105 1.7E-26 T 25-04-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 CLFO_RS01015 50b0d203280fa6e08196a18b28afc066 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 175 4.2E-54 T 25-04-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CLFO_RS01015 50b0d203280fa6e08196a18b28afc066 180 PRINTS PR00125 ATP synthase delta subunit signature 5 24 6.6E-31 T 25-04-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CLFO_RS01015 50b0d203280fa6e08196a18b28afc066 180 PRINTS PR00125 ATP synthase delta subunit signature 85 99 6.6E-31 T 25-04-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CLFO_RS01015 50b0d203280fa6e08196a18b28afc066 180 PRINTS PR00125 ATP synthase delta subunit signature 135 150 6.6E-31 T 25-04-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CLFO_RS01015 50b0d203280fa6e08196a18b28afc066 180 PRINTS PR00125 ATP synthase delta subunit signature 74 85 6.6E-31 T 25-04-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CLFO_RS01015 50b0d203280fa6e08196a18b28afc066 180 PRINTS PR00125 ATP synthase delta subunit signature 150 168 6.6E-31 T 25-04-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CLFO_RS01015 50b0d203280fa6e08196a18b28afc066 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 177 21.854 T 25-04-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 CLFO_RS01015 50b0d203280fa6e08196a18b28afc066 180 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 25-04-2017 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210 CLFO_RS14320 67952156c937899d9709e728bc42f7fd 462 PIRSF PIRSF000774 1 462 9.7E-163 T 25-04-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLFO_RS14320 67952156c937899d9709e728bc42f7fd 462 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 349 368 - T 25-04-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLFO_RS14320 67952156c937899d9709e728bc42f7fd 462 Pfam PF04963 Sigma-54 factor, core binding domain 99 287 1.5E-58 T 25-04-2017 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CLFO_RS14320 67952156c937899d9709e728bc42f7fd 462 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 51 1.3E-16 T 25-04-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLFO_RS14320 67952156c937899d9709e728bc42f7fd 462 PRINTS PR00045 Sigma-54 factor signature 361 373 1.5E-28 T 25-04-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLFO_RS14320 67952156c937899d9709e728bc42f7fd 462 PRINTS PR00045 Sigma-54 factor signature 377 388 1.5E-28 T 25-04-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLFO_RS14320 67952156c937899d9709e728bc42f7fd 462 PRINTS PR00045 Sigma-54 factor signature 172 189 1.5E-28 T 25-04-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLFO_RS14320 67952156c937899d9709e728bc42f7fd 462 PRINTS PR00045 Sigma-54 factor signature 435 453 1.5E-28 T 25-04-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLFO_RS14320 67952156c937899d9709e728bc42f7fd 462 Gene3D G3DSA:1.10.260.40 349 373 1.3E-4 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS14320 67952156c937899d9709e728bc42f7fd 462 Pfam PF04552 Sigma-54, DNA binding domain 302 460 1.7E-67 T 25-04-2017 IPR007634 RNA polymerase sigma factor 54, DNA-binding CLFO_RS14320 67952156c937899d9709e728bc42f7fd 462 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 440 447 - T 25-04-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLFO_RS14320 67952156c937899d9709e728bc42f7fd 462 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 459 8.4E-146 T 25-04-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00440 ca5708278f44b38967fca021024631c8 255 PIRSF PIRSF005902 1 255 9.7E-89 T 25-04-2017 IPR001130 TatD family GO:0016788 CLFO_RS00440 ca5708278f44b38967fca021024631c8 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 25-04-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CLFO_RS00440 ca5708278f44b38967fca021024631c8 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 7.6E-93 T 25-04-2017 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CLFO_RS00440 ca5708278f44b38967fca021024631c8 255 Pfam PF01026 TatD related DNase 3 253 7.4E-88 T 25-04-2017 IPR001130 TatD family GO:0016788 CLFO_RS00440 ca5708278f44b38967fca021024631c8 255 Gene3D G3DSA:3.20.20.140 1 254 8.9E-99 T 25-04-2017 CLFO_RS00440 ca5708278f44b38967fca021024631c8 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 25-04-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CLFO_RS00440 ca5708278f44b38967fca021024631c8 255 SUPERFAMILY SSF51556 2 254 4.17E-95 T 25-04-2017 IPR032466 Metal-dependent hydrolase CLFO_RS13030 ffa5866ad004e0f72899a6fe25e3724d 607 Pfam PF12733 Cadherin-like beta sandwich domain 522 606 2.5E-12 T 25-04-2017 IPR025883 Cadherin-like beta sandwich domain CLFO_RS13030 ffa5866ad004e0f72899a6fe25e3724d 607 SUPERFAMILY SSF48239 234 513 1.26E-19 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS13030 ffa5866ad004e0f72899a6fe25e3724d 607 Pfam PF07554 Uncharacterised Sugar-binding Domain 178 212 0.0013 T 25-04-2017 IPR011490 FIVAR domain CLFO_RS13030 ffa5866ad004e0f72899a6fe25e3724d 607 Pfam PF14478 Domain of unknown function (DUF4430) 6 36 6.7E-7 T 25-04-2017 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 CLFO_RS13030 ffa5866ad004e0f72899a6fe25e3724d 607 Gene3D G3DSA:1.50.10.20 241 492 2.0E-18 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS04510 f2ffe15c3d1661ac4b57aae94a90ffb3 431 SUPERFAMILY SSF53623 1 296 8.24E-94 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS04510 f2ffe15c3d1661ac4b57aae94a90ffb3 431 Pfam PF08245 Mur ligase middle domain 44 270 1.3E-17 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS04510 f2ffe15c3d1661ac4b57aae94a90ffb3 431 PIRSF PIRSF001563 1 431 6.7E-148 T 25-04-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CLFO_RS04510 f2ffe15c3d1661ac4b57aae94a90ffb3 431 Gene3D G3DSA:3.90.190.20 298 430 6.2E-39 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS04510 f2ffe15c3d1661ac4b57aae94a90ffb3 431 Gene3D G3DSA:3.40.1190.10 1 297 5.1E-99 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS04510 f2ffe15c3d1661ac4b57aae94a90ffb3 431 Pfam PF02875 Mur ligase family, glutamate ligase domain 298 374 5.5E-6 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS04510 f2ffe15c3d1661ac4b57aae94a90ffb3 431 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 427 7.4E-121 T 25-04-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CLFO_RS04510 f2ffe15c3d1661ac4b57aae94a90ffb3 431 SUPERFAMILY SSF53244 298 429 7.59E-30 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS04510 f2ffe15c3d1661ac4b57aae94a90ffb3 431 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 140 155 - T 25-04-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CLFO_RS04510 f2ffe15c3d1661ac4b57aae94a90ffb3 431 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 42 65 - T 25-04-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 608 9.8E-246 T 25-04-2017 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Pfam PF01751 Toprim domain 5 113 5.2E-31 T 25-04-2017 IPR006171 Toprim domain CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 SMART SM00436 106 192 8.4E-44 T 25-04-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Pfam PF01131 DNA topoisomerase 128 545 1.9E-130 T 25-04-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 630 54.344 T 25-04-2017 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Gene3D G3DSA:2.70.20.10 184 315 5.7E-31 T 25-04-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Gene3D G3DSA:2.70.20.10 323 454 1.3E-31 T 25-04-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 SMART SM00493 3 103 8.3E-32 T 25-04-2017 IPR006171 Toprim domain CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 280 303 - T 25-04-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 574 609 2.7E-15 T 25-04-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 613 651 9.6E-14 T 25-04-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 655 689 0.043 T 25-04-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Gene3D G3DSA:3.40.50.140 3 134 9.3E-43 T 25-04-2017 IPR006171 Toprim domain CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 SUPERFAMILY SSF56712 3 559 1.44E-193 T 25-04-2017 IPR023405 DNA topoisomerase, type IA, core domain CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 SUPERFAMILY SSF56712 614 621 1.44E-193 T 25-04-2017 IPR023405 DNA topoisomerase, type IA, core domain CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 SUPERFAMILY SSF57783 566 609 1.65E-12 T 25-04-2017 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 372 388 1.9E-34 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 1.9E-34 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 294 303 1.9E-34 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.9E-34 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 471 485 1.9E-34 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Gene3D G3DSA:1.10.460.10 616 619 3.4E-58 T 25-04-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Gene3D G3DSA:1.10.460.10 135 182 3.4E-58 T 25-04-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Gene3D G3DSA:1.10.460.10 455 559 3.4E-58 T 25-04-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Gene3D G3DSA:3.30.65.10 565 615 1.2E-18 T 25-04-2017 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 Gene3D G3DSA:3.30.65.10 620 660 4.6E-4 T 25-04-2017 CLFO_RS11175 d247791a2b45116bced02bc686ac5460 690 SMART SM00437 243 508 1.5E-116 T 25-04-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CLFO_RS12665 30b9e90e911b8b53a70627305a4caa5d 528 Pfam PF03880 DbpA RNA binding domain 453 524 5.3E-29 T 25-04-2017 IPR005580 DbpA, RNA-binding domain CLFO_RS12665 30b9e90e911b8b53a70627305a4caa5d 528 Gene3D G3DSA:3.40.50.300 5 211 1.2E-82 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12665 30b9e90e911b8b53a70627305a4caa5d 528 SUPERFAMILY SSF52540 72 358 1.6E-76 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12665 30b9e90e911b8b53a70627305a4caa5d 528 Pfam PF00270 DEAD/DEAH box helicase 28 194 2.3E-51 T 25-04-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLFO_RS12665 30b9e90e911b8b53a70627305a4caa5d 528 Gene3D G3DSA:3.40.50.300 212 370 9.0E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12665 30b9e90e911b8b53a70627305a4caa5d 528 SMART SM00487 23 221 3.6E-64 T 25-04-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLFO_RS12665 30b9e90e911b8b53a70627305a4caa5d 528 Pfam PF00271 Helicase conserved C-terminal domain 229 338 2.2E-29 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS12665 30b9e90e911b8b53a70627305a4caa5d 528 SMART SM00490 257 338 1.5E-35 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS00525 d078d5c0e70538465d98d7e72fd9b7f1 460 Gene3D G3DSA:3.40.1190.10 100 318 1.0E-73 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS00525 d078d5c0e70538465d98d7e72fd9b7f1 460 Gene3D G3DSA:3.40.50.720 13 96 1.4E-33 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS00525 d078d5c0e70538465d98d7e72fd9b7f1 460 SUPERFAMILY SSF51984 12 97 3.79E-27 T 25-04-2017 CLFO_RS00525 d078d5c0e70538465d98d7e72fd9b7f1 460 Gene3D G3DSA:3.90.190.20 319 458 6.0E-53 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS00525 d078d5c0e70538465d98d7e72fd9b7f1 460 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 13 456 2.7E-149 T 25-04-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS00525 d078d5c0e70538465d98d7e72fd9b7f1 460 Pfam PF01225 Mur ligase family, catalytic domain 13 111 5.2E-27 T 25-04-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLFO_RS00525 d078d5c0e70538465d98d7e72fd9b7f1 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 399 1.5E-20 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS00525 d078d5c0e70538465d98d7e72fd9b7f1 460 SUPERFAMILY SSF53244 316 457 1.26E-44 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS00525 d078d5c0e70538465d98d7e72fd9b7f1 460 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 11 460 39.126 T 25-04-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS00525 d078d5c0e70538465d98d7e72fd9b7f1 460 SUPERFAMILY SSF53623 98 314 1.07E-62 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS00525 d078d5c0e70538465d98d7e72fd9b7f1 460 Pfam PF08245 Mur ligase middle domain 117 295 8.4E-32 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS19780 9f7a9cdea89252463401274cc44b6b20 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 25-04-2017 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19780 9f7a9cdea89252463401274cc44b6b20 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 19.67 T 25-04-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19780 9f7a9cdea89252463401274cc44b6b20 49 SUPERFAMILY SSF57829 2 49 9.77E-20 T 25-04-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 CLFO_RS19780 9f7a9cdea89252463401274cc44b6b20 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 49 5.1E-21 T 25-04-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19780 9f7a9cdea89252463401274cc44b6b20 49 Pfam PF00471 Ribosomal protein L33 3 49 7.9E-24 T 25-04-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS20810 d71f45e1e07da9a0340d8da161a01d43 392 Pfam PF01385 Probable transposase 177 305 2.4E-16 T 25-04-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 CLFO_RS20810 d71f45e1e07da9a0340d8da161a01d43 392 Pfam PF12323 Helix-turn-helix domain 1 43 3.8E-13 T 25-04-2017 IPR021027 Transposase, putative, helix-turn-helix domain CLFO_RS20810 d71f45e1e07da9a0340d8da161a01d43 392 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 271 345 2.2E-13 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS20810 d71f45e1e07da9a0340d8da161a01d43 392 Pfam PF07282 Putative transposase DNA-binding domain 319 386 2.7E-24 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS12490 55a86ffaf67cc52657b4b5e05f6b6c20 317 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 34.464 T 25-04-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CLFO_RS12490 55a86ffaf67cc52657b4b5e05f6b6c20 317 SUPERFAMILY SSF53335 77 307 1.69E-40 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS12490 55a86ffaf67cc52657b4b5e05f6b6c20 317 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 310 6.3E-94 T 25-04-2017 CLFO_RS12490 55a86ffaf67cc52657b4b5e05f6b6c20 317 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 304 5.0E-74 T 25-04-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CLFO_RS12490 55a86ffaf67cc52657b4b5e05f6b6c20 317 PIRSF PIRSF000401 1 313 1.0E-102 T 25-04-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CLFO_RS12490 55a86ffaf67cc52657b4b5e05f6b6c20 317 Gene3D G3DSA:3.40.50.150 115 305 2.9E-41 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS13970 f881b7db5c3f90118e5f7c099154688c 388 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 28 39 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS13970 f881b7db5c3f90118e5f7c099154688c 388 Pfam PF02754 Cysteine-rich domain 255 335 1.1E-8 T 25-04-2017 IPR004017 Cysteine-rich domain CLFO_RS13970 f881b7db5c3f90118e5f7c099154688c 388 Pfam PF02754 Cysteine-rich domain 139 218 1.6E-5 T 25-04-2017 IPR004017 Cysteine-rich domain CLFO_RS13970 f881b7db5c3f90118e5f7c099154688c 388 SUPERFAMILY SSF46548 23 96 2.04E-13 T 25-04-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 CLFO_RS13970 f881b7db5c3f90118e5f7c099154688c 388 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 69 80 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS13970 f881b7db5c3f90118e5f7c099154688c 388 Pfam PF13237 4Fe-4S dicluster domain 23 80 2.0E-7 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS13970 f881b7db5c3f90118e5f7c099154688c 388 Gene3D G3DSA:1.10.1060.10 14 100 3.0E-12 T 25-04-2017 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 ProSitePatterns PS01312 SecA family signature. 481 496 - T 25-04-2017 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 Pfam PF01043 SecA preprotein cross-linking domain 231 339 1.3E-43 T 25-04-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 Gene3D G3DSA:3.40.50.300 350 397 3.6E-127 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 Gene3D G3DSA:3.40.50.300 2 227 3.6E-127 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 825 0.0 T 25-04-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 Gene3D G3DSA:3.40.50.300 398 628 1.0E-97 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 Pfam PF02810 SEC-C motif 873 891 1.1E-9 T 25-04-2017 IPR004027 SEC-C motif CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 839 20.391 T 25-04-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 Gene3D G3DSA:1.10.3060.10 657 837 5.9E-58 T 25-04-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 PRINTS PR00906 SecA protein signature 320 342 3.3E-70 T 25-04-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 PRINTS PR00906 SecA protein signature 357 374 3.3E-70 T 25-04-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 PRINTS PR00906 SecA protein signature 169 189 3.3E-70 T 25-04-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 PRINTS PR00906 SecA protein signature 62 86 3.3E-70 T 25-04-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 PRINTS PR00906 SecA protein signature 394 407 3.3E-70 T 25-04-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 PRINTS PR00906 SecA protein signature 100 114 3.3E-70 T 25-04-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 PRINTS PR00906 SecA protein signature 116 126 3.3E-70 T 25-04-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 Gene3D G3DSA:3.90.1440.10 229 349 1.7E-49 T 25-04-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 SMART SM00957 5 383 1.8E-293 T 25-04-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 SUPERFAMILY SSF81886 629 881 3.4E-79 T 25-04-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 Pfam PF07517 SecA DEAD-like domain 6 382 3.0E-133 T 25-04-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 Pfam PF07516 SecA Wing and Scaffold domain 626 836 4.6E-70 T 25-04-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 SUPERFAMILY SSF81767 226 349 2.62E-47 T 25-04-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 SUPERFAMILY SSF52540 398 627 1.44E-56 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 SUPERFAMILY SSF52540 4 227 4.79E-86 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 SUPERFAMILY SSF52540 349 396 4.79E-86 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01680 0bbb50b5387daeb6965d77a29cd8695b 891 SMART SM00958 227 339 1.2E-71 T 25-04-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CLFO_RS20605 12e00f7c032cd72e4a28352eb2ec4182 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.1E-9 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS20605 12e00f7c032cd72e4a28352eb2ec4182 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.1E-9 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS20605 12e00f7c032cd72e4a28352eb2ec4182 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.1E-9 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS20605 12e00f7c032cd72e4a28352eb2ec4182 305 SUPERFAMILY SSF46785 1 83 7.59E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20605 12e00f7c032cd72e4a28352eb2ec4182 305 Gene3D G3DSA:3.40.190.10 178 266 1.4E-20 T 25-04-2017 CLFO_RS20605 12e00f7c032cd72e4a28352eb2ec4182 305 Pfam PF03466 LysR substrate binding domain 91 291 5.2E-35 T 25-04-2017 IPR005119 LysR, substrate-binding CLFO_RS20605 12e00f7c032cd72e4a28352eb2ec4182 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.2E-21 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS20605 12e00f7c032cd72e4a28352eb2ec4182 305 Gene3D G3DSA:3.40.190.10 90 177 6.4E-22 T 25-04-2017 CLFO_RS20605 12e00f7c032cd72e4a28352eb2ec4182 305 SUPERFAMILY SSF53850 89 297 1.1E-33 T 25-04-2017 CLFO_RS20605 12e00f7c032cd72e4a28352eb2ec4182 305 Gene3D G3DSA:1.10.10.10 1 84 3.9E-28 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 SUPERFAMILY SSF53732 1 418 9.68E-149 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 TIGRFAM TIGR02083 LEU2: 3-isopropylmalate dehydratase, large subunit 3 419 1.0E-229 T 25-04-2017 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 Gene3D G3DSA:3.30.499.10 1 159 8.4E-38 T 25-04-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 ProSitePatterns PS01244 Aconitase family signature 2. 352 365 - T 25-04-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 ProSitePatterns PS00450 Aconitase family signature 1. 292 308 - T 25-04-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 PRINTS PR00415 Aconitase family signature 190 203 1.7E-17 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 PRINTS PR00415 Aconitase family signature 352 365 1.7E-17 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 PRINTS PR00415 Aconitase family signature 204 217 1.7E-17 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 PRINTS PR00415 Aconitase family signature 114 127 1.7E-17 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 PRINTS PR00415 Aconitase family signature 128 143 1.7E-17 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 Gene3D G3DSA:3.30.499.10 273 419 2.3E-57 T 25-04-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 Gene3D G3DSA:3.40.1060.10 161 265 1.6E-35 T 25-04-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 419 50.281 T 25-04-2017 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 418 6.0E-160 T 25-04-2017 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 417 6.2E-177 T 25-04-2017 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 CLFO_RS05440 b83cb513af0aca61e86fac9632b259db 420 Pfam PF00330 Aconitase family (aconitate hydratase) 8 411 1.5E-99 T 25-04-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS00890 a2b39903a9acf4848dda8238820ca5aa 322 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 319 1.7E-126 T 25-04-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CLFO_RS00890 a2b39903a9acf4848dda8238820ca5aa 322 PIRSF PIRSF004532 1 322 5.7E-142 T 25-04-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CLFO_RS00890 a2b39903a9acf4848dda8238820ca5aa 322 SUPERFAMILY SSF56655 1 315 3.36E-108 T 25-04-2017 CLFO_RS00890 a2b39903a9acf4848dda8238820ca5aa 322 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 312 4.3E-142 T 25-04-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CLFO_RS00890 a2b39903a9acf4848dda8238820ca5aa 322 Gene3D G3DSA:3.30.540.10 1 174 1.5E-63 T 25-04-2017 CLFO_RS00890 a2b39903a9acf4848dda8238820ca5aa 322 Gene3D G3DSA:3.30.540.10 175 320 4.8E-42 T 25-04-2017 CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 SMART SM00388 249 315 7.1E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 SUPERFAMILY SSF158472 197 245 3.53E-8 T 25-04-2017 CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 Pfam PF00672 HAMP domain 176 244 1.3E-14 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 SMART SM00304 194 248 2.2E-10 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 Gene3D G3DSA:3.30.565.10 301 470 2.7E-43 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 Gene3D G3DSA:1.10.287.130 239 300 1.5E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 SUPERFAMILY SSF55874 305 470 3.67E-42 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 315 4.7E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 471 1.0E-19 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 SUPERFAMILY SSF47384 232 315 1.08E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 SMART SM00387 359 472 6.6E-30 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 3.4E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 3.4E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 3.4E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13430 8673d5e4439e0af0ea2330916e3966d7 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 3.4E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS19350 2245f6cbac61f267551daf9c54602a27 119 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 59 77 - T 25-04-2017 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 CLFO_RS19350 2245f6cbac61f267551daf9c54602a27 119 Pfam PF01022 Bacterial regulatory protein, arsR family 43 88 3.7E-17 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS19350 2245f6cbac61f267551daf9c54602a27 119 SUPERFAMILY SSF46785 24 116 2.65E-27 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS19350 2245f6cbac61f267551daf9c54602a27 119 SMART SM00418 36 114 2.6E-28 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS19350 2245f6cbac61f267551daf9c54602a27 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 7.5E-19 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS19350 2245f6cbac61f267551daf9c54602a27 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 85 100 7.5E-19 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS19350 2245f6cbac61f267551daf9c54602a27 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 38 53 7.5E-19 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS19350 2245f6cbac61f267551daf9c54602a27 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 68 7.5E-19 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS19350 2245f6cbac61f267551daf9c54602a27 119 Gene3D G3DSA:1.10.10.10 6 118 6.8E-38 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 Gene3D G3DSA:1.10.8.260 285 333 1.7E-5 T 25-04-2017 IPR023166 HI0933 insert-like domain CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.9E-7 T 25-04-2017 CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 6.9E-7 T 25-04-2017 CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 SUPERFAMILY SSF51905 349 404 2.23E-54 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 SUPERFAMILY SSF51905 3 195 2.23E-54 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 Gene3D G3DSA:2.40.30.10 193 282 9.1E-19 T 25-04-2017 CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 SUPERFAMILY SSF160996 194 352 1.83E-36 T 25-04-2017 CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 404 1.5E-137 T 25-04-2017 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 Gene3D G3DSA:3.50.50.60 1 191 6.1E-47 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 Gene3D G3DSA:3.50.50.60 351 404 6.1E-47 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 Pfam PF03486 HI0933-like protein 5 404 3.5E-133 T 25-04-2017 CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.3E-6 T 25-04-2017 CLFO_RS11525 bae039ec69cad0336e414cacbbbf6304 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 169 2.3E-6 T 25-04-2017 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 Gene3D G3DSA:1.10.10.350 391 485 2.8E-17 T 25-04-2017 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 488 33.121 T 25-04-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 326 1.2E-112 T 25-04-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 PRINTS PR00987 Glutamyl-tRNA synthetase signature 215 223 6.4E-26 T 25-04-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 6.4E-26 T 25-04-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 209 6.4E-26 T 25-04-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 6.4E-26 T 25-04-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 6.4E-26 T 25-04-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 Gene3D G3DSA:1.10.1160.10 253 334 9.9E-37 T 25-04-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 Gene3D G3DSA:3.90.800.10 70 200 1.2E-42 T 25-04-2017 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 Gene3D G3DSA:3.40.50.620 201 250 4.9E-49 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 Gene3D G3DSA:3.40.50.620 3 69 4.9E-49 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 SUPERFAMILY SSF48163 320 486 1.09E-39 T 25-04-2017 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 SUPERFAMILY SSF52374 3 316 3.75E-110 T 25-04-2017 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 486 2.8E-175 T 25-04-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CLFO_RS19830 9f348f1fd5e3e8bc44774215246df67f 492 Gene3D G3DSA:1.10.8.70 336 386 0.001 T 25-04-2017 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 SUPERFAMILY SSF55681 18 280 9.43E-81 T 25-04-2017 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 SUPERFAMILY SSF52954 283 405 1.24E-35 T 25-04-2017 IPR004154 Anticodon-binding CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 Pfam PF03129 Anticodon binding domain 294 386 5.6E-21 T 25-04-2017 IPR004154 Anticodon-binding CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 Gene3D G3DSA:3.30.930.10 7 287 6.3E-117 T 25-04-2017 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 Gene3D G3DSA:3.40.50.800 288 403 3.2E-43 T 25-04-2017 IPR004154 Anticodon-binding CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 SUPERFAMILY SSF64586 408 480 3.53E-24 T 25-04-2017 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 SMART SM00946 413 480 9.4E-33 T 25-04-2017 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 Gene3D G3DSA:3.30.110.30 407 479 6.8E-30 T 25-04-2017 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 Hamap MF_01571 Proline--tRNA ligase [proS]. 12 480 45.737 T 25-04-2017 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 PRINTS PR01046 Prolyl-tRNA synthetase signature 150 161 4.4E-11 T 25-04-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 PRINTS PR01046 Prolyl-tRNA synthetase signature 70 88 4.4E-11 T 25-04-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 PRINTS PR01046 Prolyl-tRNA synthetase signature 111 122 4.4E-11 T 25-04-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 PRINTS PR01046 Prolyl-tRNA synthetase signature 141 149 4.4E-11 T 25-04-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 15 480 3.5E-185 T 25-04-2017 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 413 480 8.8E-25 T 25-04-2017 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 CLFO_RS19840 328cd029908eb325af6fd856805ef476 480 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 106 275 1.1E-21 T 25-04-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS13540 bc42d2142914ec49871e015024536152 491 Gene3D G3DSA:3.30.450.20 33 168 5.6E-4 T 25-04-2017 CLFO_RS13540 bc42d2142914ec49871e015024536152 491 Gene3D G3DSA:3.30.565.10 311 484 9.7E-49 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13540 bc42d2142914ec49871e015024536152 491 Gene3D G3DSA:1.10.287.130 249 310 6.6E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13540 bc42d2142914ec49871e015024536152 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 481 8.8E-26 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13540 bc42d2142914ec49871e015024536152 491 SMART SM00304 198 250 5.7E-11 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS13540 bc42d2142914ec49871e015024536152 491 SUPERFAMILY SSF158472 200 247 3.92E-9 T 25-04-2017 CLFO_RS13540 bc42d2142914ec49871e015024536152 491 SMART SM00387 371 483 2.1E-37 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13540 bc42d2142914ec49871e015024536152 491 SMART SM00388 258 325 2.4E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13540 bc42d2142914ec49871e015024536152 491 Pfam PF00672 HAMP domain 180 247 2.0E-12 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS13540 bc42d2142914ec49871e015024536152 491 SUPERFAMILY SSF47384 242 325 1.41E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13540 bc42d2142914ec49871e015024536152 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 6.2E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13540 bc42d2142914ec49871e015024536152 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 436 6.2E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13540 bc42d2142914ec49871e015024536152 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 6.2E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13540 bc42d2142914ec49871e015024536152 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 6.2E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13540 bc42d2142914ec49871e015024536152 491 SUPERFAMILY SSF55874 316 481 3.8E-45 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13540 bc42d2142914ec49871e015024536152 491 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 325 2.2E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS07240 802d577b2d5adfc6039058b3586d308b 383 SUPERFAMILY SSF55874 248 380 1.03E-20 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS07240 802d577b2d5adfc6039058b3586d308b 383 SMART SM00387 285 383 4.3E-12 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS07240 802d577b2d5adfc6039058b3586d308b 383 Pfam PF05384 Sensor protein DegS 12 170 9.4E-49 T 25-04-2017 IPR008595 Sensor DegS GO:0007165|GO:0016301 CLFO_RS07240 802d577b2d5adfc6039058b3586d308b 383 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 290 381 4.3E-13 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS07240 802d577b2d5adfc6039058b3586d308b 383 PIRSF PIRSF003169 1 383 3.3E-132 T 25-04-2017 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 CLFO_RS07240 802d577b2d5adfc6039058b3586d308b 383 Pfam PF07730 Histidine kinase 180 245 6.2E-16 T 25-04-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CLFO_RS07240 802d577b2d5adfc6039058b3586d308b 383 Gene3D G3DSA:3.30.565.10 253 382 8.6E-15 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS07240 802d577b2d5adfc6039058b3586d308b 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 380 7.5E-6 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS07240 802d577b2d5adfc6039058b3586d308b 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 335 7.5E-6 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS07240 802d577b2d5adfc6039058b3586d308b 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 361 7.5E-6 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS11365 749af70bcc33ee58ea5add44de5cb2c7 217 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 200 2.4E-89 T 25-04-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLFO_RS11365 749af70bcc33ee58ea5add44de5cb2c7 217 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 25-04-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLFO_RS11365 749af70bcc33ee58ea5add44de5cb2c7 217 PIRSF PIRSF001461 1 217 3.6E-99 T 25-04-2017 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLFO_RS11365 749af70bcc33ee58ea5add44de5cb2c7 217 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 25-04-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLFO_RS11365 749af70bcc33ee58ea5add44de5cb2c7 217 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 213 2.0E-93 T 25-04-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CLFO_RS11365 749af70bcc33ee58ea5add44de5cb2c7 217 SUPERFAMILY SSF51366 1 214 5.18E-78 T 25-04-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLFO_RS11365 749af70bcc33ee58ea5add44de5cb2c7 217 Gene3D G3DSA:3.20.20.70 2 215 7.8E-98 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS11790 d653100316eea2c68777559b6762912e 222 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 212 1.1E-84 T 25-04-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 CLFO_RS11790 d653100316eea2c68777559b6762912e 222 Gene3D G3DSA:3.20.20.70 1 215 9.1E-90 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS11790 d653100316eea2c68777559b6762912e 222 SMART SM01133 2 214 3.3E-95 T 25-04-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 CLFO_RS11790 d653100316eea2c68777559b6762912e 222 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 216 35.489 T 25-04-2017 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CLFO_RS11790 d653100316eea2c68777559b6762912e 222 PIRSF PIRSF001357 1 220 8.8E-77 T 25-04-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 CLFO_RS11790 d653100316eea2c68777559b6762912e 222 SUPERFAMILY SSF51569 1 214 2.09E-81 T 25-04-2017 CLFO_RS11790 d653100316eea2c68777559b6762912e 222 Pfam PF01791 DeoC/LacD family aldolase 4 207 3.9E-18 T 25-04-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 CLFO_RS02725 44027dec6c018862465f39f98fe94c2e 2835 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2334 2761 7.3E-135 T 25-04-2017 IPR033432 Glycosyl hydrolase 36, catalytic domain CLFO_RS02725 44027dec6c018862465f39f98fe94c2e 2835 SUPERFAMILY SSF74650 1554 1811 1.51E-65 T 25-04-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CLFO_RS02725 44027dec6c018862465f39f98fe94c2e 2835 SMART SM01068 2041 2106 1.9E-32 T 25-04-2017 IPR009342 Putative carbohydrate binding domain CLFO_RS02725 44027dec6c018862465f39f98fe94c2e 2835 SMART SM01068 1537 1601 1.7E-17 T 25-04-2017 IPR009342 Putative carbohydrate binding domain CLFO_RS02725 44027dec6c018862465f39f98fe94c2e 2835 Gene3D G3DSA:2.70.98.40 2041 2363 6.2E-94 T 25-04-2017 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 CLFO_RS02725 44027dec6c018862465f39f98fe94c2e 2835 Gene3D G3DSA:2.70.98.40 1556 1844 9.6E-86 T 25-04-2017 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 CLFO_RS02725 44027dec6c018862465f39f98fe94c2e 2835 Gene3D G3DSA:2.60.420.10 2754 2802 1.4E-9 T 25-04-2017 CLFO_RS02725 44027dec6c018862465f39f98fe94c2e 2835 Pfam PF10091 Putative glucoamylase 1302 1510 1.1E-20 T 25-04-2017 IPR019282 Domain of unknown function DUF2329 CLFO_RS02725 44027dec6c018862465f39f98fe94c2e 2835 SUPERFAMILY SSF74650 2041 2305 5.96E-82 T 25-04-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CLFO_RS02725 44027dec6c018862465f39f98fe94c2e 2835 Pfam PF06165 Glycosyltransferase family 36 2064 2303 2.5E-83 T 25-04-2017 IPR010383 Glycosyl hydrolase 94 CLFO_RS02725 44027dec6c018862465f39f98fe94c2e 2835 Pfam PF06165 Glycosyltransferase family 36 1564 1810 8.4E-68 T 25-04-2017 IPR010383 Glycosyl hydrolase 94 CLFO_RS02725 44027dec6c018862465f39f98fe94c2e 2835 SUPERFAMILY SSF48208 2313 2834 1.97E-97 T 25-04-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 CLFO_RS21045 4bf3b2738a05a6d56f797de6e8dd1a59 345 SMART SM00729 5 206 9.9E-4 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS21045 4bf3b2738a05a6d56f797de6e8dd1a59 345 Pfam PF13353 4Fe-4S single cluster domain 8 98 2.8E-9 T 25-04-2017 CLFO_RS21045 4bf3b2738a05a6d56f797de6e8dd1a59 345 Gene3D G3DSA:3.20.20.70 6 317 2.8E-56 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS21045 4bf3b2738a05a6d56f797de6e8dd1a59 345 PIRSF PIRSF037420 5 342 3.1E-45 T 25-04-2017 IPR017200 Coenzyme PQQ synthesis protein E CLFO_RS21045 4bf3b2738a05a6d56f797de6e8dd1a59 345 Pfam PF13186 Iron-sulfur cluster-binding domain 245 303 1.6E-4 T 25-04-2017 IPR023885 4Fe4S-binding SPASM domain CLFO_RS21045 4bf3b2738a05a6d56f797de6e8dd1a59 345 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 246 330 1.5E-9 T 25-04-2017 IPR023885 4Fe4S-binding SPASM domain CLFO_RS21045 4bf3b2738a05a6d56f797de6e8dd1a59 345 SUPERFAMILY SSF102114 7 313 1.08E-51 T 25-04-2017 CLFO_RS21045 4bf3b2738a05a6d56f797de6e8dd1a59 345 Pfam PF04055 Radical SAM superfamily 9 160 9.5E-21 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS15195 631dd07e84bba1ecc41685452269628e 201 Pfam PF00072 Response regulator receiver domain 3 114 1.1E-29 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15195 631dd07e84bba1ecc41685452269628e 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 2.8E-18 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS15195 631dd07e84bba1ecc41685452269628e 201 SUPERFAMILY SSF52172 1 168 5.98E-36 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS15195 631dd07e84bba1ecc41685452269628e 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 3.7E-13 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS15195 631dd07e84bba1ecc41685452269628e 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 3.7E-13 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS15195 631dd07e84bba1ecc41685452269628e 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 3.7E-13 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS15195 631dd07e84bba1ecc41685452269628e 201 Gene3D G3DSA:3.40.50.2300 1 143 1.8E-40 T 25-04-2017 CLFO_RS15195 631dd07e84bba1ecc41685452269628e 201 Gene3D G3DSA:1.10.10.10 144 199 2.6E-27 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15195 631dd07e84bba1ecc41685452269628e 201 SMART SM00448 1 114 9.8E-33 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15195 631dd07e84bba1ecc41685452269628e 201 SMART SM00421 140 197 3.2E-22 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS00295 ed3d68c9e5ae569a978812f90d4f8c1e 459 Gene3D G3DSA:3.40.50.300 5 194 5.7E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00295 ed3d68c9e5ae569a978812f90d4f8c1e 459 SUPERFAMILY SSF52540 5 199 6.16E-42 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00295 ed3d68c9e5ae569a978812f90d4f8c1e 459 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 4 441 41.951 T 25-04-2017 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CLFO_RS00295 ed3d68c9e5ae569a978812f90d4f8c1e 459 SUPERFAMILY SSF52317 248 451 1.27E-28 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS00295 ed3d68c9e5ae569a978812f90d4f8c1e 459 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 8 450 1.8E-144 T 25-04-2017 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CLFO_RS00295 ed3d68c9e5ae569a978812f90d4f8c1e 459 Gene3D G3DSA:3.40.50.880 254 456 4.7E-23 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS00295 ed3d68c9e5ae569a978812f90d4f8c1e 459 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 187 5.5E-23 T 25-04-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLFO_RS00295 ed3d68c9e5ae569a978812f90d4f8c1e 459 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 247 440 3.4E-36 T 25-04-2017 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CLFO_RS20600 c2bf45b391e0dd5e8637075c74b99901 358 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 7 354 1.9E-154 T 25-04-2017 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLFO_RS20600 c2bf45b391e0dd5e8637075c74b99901 358 PIRSF PIRSF036458 4 358 3.4E-157 T 25-04-2017 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLFO_RS20600 c2bf45b391e0dd5e8637075c74b99901 358 SUPERFAMILY SSF53067 7 176 5.53E-70 T 25-04-2017 CLFO_RS20600 c2bf45b391e0dd5e8637075c74b99901 358 Gene3D G3DSA:3.30.420.40 183 338 1.6E-45 T 25-04-2017 CLFO_RS20600 c2bf45b391e0dd5e8637075c74b99901 358 SUPERFAMILY SSF53067 122 350 2.55E-52 T 25-04-2017 CLFO_RS20600 c2bf45b391e0dd5e8637075c74b99901 358 Hamap MF_00542 Probable butyrate kinase [buk]. 1 358 153.978 T 25-04-2017 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLFO_RS20600 c2bf45b391e0dd5e8637075c74b99901 358 PRINTS PR00471 Acetate kinase family signature 276 289 1.9E-16 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS20600 c2bf45b391e0dd5e8637075c74b99901 358 PRINTS PR00471 Acetate kinase family signature 299 315 1.9E-16 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS20600 c2bf45b391e0dd5e8637075c74b99901 358 PRINTS PR00471 Acetate kinase family signature 8 19 1.9E-16 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS20600 c2bf45b391e0dd5e8637075c74b99901 358 PRINTS PR00471 Acetate kinase family signature 182 203 1.9E-16 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS20600 c2bf45b391e0dd5e8637075c74b99901 358 Pfam PF00871 Acetokinase family 7 341 2.7E-65 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS20600 c2bf45b391e0dd5e8637075c74b99901 358 Gene3D G3DSA:3.30.420.40 7 182 1.3E-81 T 25-04-2017 CLFO_RS02540 e065252a9f04ff58ede97cf1b0764424 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 25-04-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CLFO_RS02540 e065252a9f04ff58ede97cf1b0764424 351 SMART SM00829 8 348 3.2E-6 T 25-04-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CLFO_RS02540 e065252a9f04ff58ede97cf1b0764424 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 142 7.8E-35 T 25-04-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLFO_RS02540 e065252a9f04ff58ede97cf1b0764424 351 SUPERFAMILY SSF51735 145 313 1.62E-42 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS02540 e065252a9f04ff58ede97cf1b0764424 351 Gene3D G3DSA:3.90.180.10 1 174 1.3E-61 T 25-04-2017 IPR011032 GroES-like CLFO_RS02540 e065252a9f04ff58ede97cf1b0764424 351 Gene3D G3DSA:3.40.50.720 175 294 3.4E-40 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS02540 e065252a9f04ff58ede97cf1b0764424 351 SUPERFAMILY SSF50129 1 181 2.28E-55 T 25-04-2017 IPR011032 GroES-like CLFO_RS02540 e065252a9f04ff58ede97cf1b0764424 351 Pfam PF00107 Zinc-binding dehydrogenase 183 308 2.0E-30 T 25-04-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLFO_RS10210 08f2524ad40a85e49979816142d3d2fd 99 Pfam PF05685 Putative restriction endonuclease 19 86 2.9E-16 T 25-04-2017 IPR008538 Domain of unknown function DUF820 CLFO_RS10210 08f2524ad40a85e49979816142d3d2fd 99 SUPERFAMILY SSF52980 19 96 5.9E-16 T 25-04-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLFO_RS10210 08f2524ad40a85e49979816142d3d2fd 99 Gene3D G3DSA:3.90.1570.10 19 96 1.0E-16 T 25-04-2017 IPR012296 Nuclease, putative, TT1808 CLFO_RS14865 9932c5ef6a6eadcf37f26980456d18f2 1027 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 776 820 3.7E-5 T 25-04-2017 IPR013378 Listeria/Bacterioides repeat CLFO_RS14865 9932c5ef6a6eadcf37f26980456d18f2 1027 SUPERFAMILY SSF50939 110 447 1.77E-5 T 25-04-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 Hamap MF_01895 Ribonuclease R [rnr]. 11 694 58.066 T 25-04-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 46 694 1.0E-211 T 25-04-2017 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 Pfam PF00575 S1 RNA binding domain 612 693 1.2E-12 T 25-04-2017 IPR003029 S1 domain GO:0003676 CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 SUPERFAMILY SSF50249 41 122 2.37E-17 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 SUPERFAMILY SSF50249 196 611 3.54E-144 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 TIGRFAM TIGR02063 RNase_R: ribonuclease R 2 695 2.9E-267 T 25-04-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 SMART SM00357 59 120 2.5E-9 T 25-04-2017 IPR011129 Cold shock protein GO:0003676 CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 SMART SM00357 125 189 1.2E-5 T 25-04-2017 IPR011129 Cold shock protein GO:0003676 CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 Pfam PF00773 RNB domain 235 564 1.1E-116 T 25-04-2017 CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 SUPERFAMILY SSF50249 113 212 2.63E-22 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 Pfam PF08206 Ribonuclease B OB domain 135 188 1.8E-9 T 25-04-2017 IPR013223 Ribonuclease B, N-terminal OB domain CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 Pfam PF08206 Ribonuclease B OB domain 60 119 6.3E-20 T 25-04-2017 IPR013223 Ribonuclease B, N-terminal OB domain CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 Gene3D G3DSA:2.40.50.140 614 693 7.3E-20 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 SUPERFAMILY SSF50249 612 693 2.43E-20 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 SMART SM00955 235 565 1.5E-176 T 25-04-2017 CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 SMART SM00316 612 694 7.4E-15 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS14270 eace798cbcdda435c3224fc323420795 696 SMART SM00316 122 186 24.0 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS18105 1d41c167a08c40e63dfbcde2e5671105 338 Pfam PF13353 4Fe-4S single cluster domain 9 92 1.6E-7 T 25-04-2017 CLFO_RS18105 1d41c167a08c40e63dfbcde2e5671105 338 Gene3D G3DSA:3.20.20.70 3 313 5.4E-80 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS18105 1d41c167a08c40e63dfbcde2e5671105 338 SMART SM00729 1 203 2.8E-4 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS18105 1d41c167a08c40e63dfbcde2e5671105 338 PIRSF PIRSF037420 1 334 8.6E-94 T 25-04-2017 IPR017200 Coenzyme PQQ synthesis protein E CLFO_RS18105 1d41c167a08c40e63dfbcde2e5671105 338 Pfam PF13186 Iron-sulfur cluster-binding domain 237 295 6.1E-9 T 25-04-2017 IPR023885 4Fe4S-binding SPASM domain CLFO_RS18105 1d41c167a08c40e63dfbcde2e5671105 338 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 237 316 3.5E-12 T 25-04-2017 IPR023885 4Fe4S-binding SPASM domain CLFO_RS18105 1d41c167a08c40e63dfbcde2e5671105 338 Pfam PF04055 Radical SAM superfamily 6 161 4.6E-25 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS18105 1d41c167a08c40e63dfbcde2e5671105 338 TIGRFAM TIGR04055 rSAM_NirJ2: putative heme d1 biosynthesis radical SAM protein NirJ2 2 327 9.2E-188 T 25-04-2017 IPR027633 Putative heme D1 biosynthesis radical SAM protein NirJ2 CLFO_RS18105 1d41c167a08c40e63dfbcde2e5671105 338 SUPERFAMILY SSF102114 3 303 1.44E-74 T 25-04-2017 CLFO_RS02545 faf1faa230bf6c4ca89398f57dd2a4b8 234 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 38 197 3.0E-52 T 25-04-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CLFO_RS02545 faf1faa230bf6c4ca89398f57dd2a4b8 234 Pfam PF03099 Biotin/lipoate A/B protein ligase family 65 165 3.2E-8 T 25-04-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CLFO_RS02545 faf1faa230bf6c4ca89398f57dd2a4b8 234 Gene3D G3DSA:3.90.1550.10 3 209 4.9E-68 T 25-04-2017 CLFO_RS02545 faf1faa230bf6c4ca89398f57dd2a4b8 234 SUPERFAMILY SSF55681 4 212 8.29E-60 T 25-04-2017 CLFO_RS02545 faf1faa230bf6c4ca89398f57dd2a4b8 234 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 81 128 1.0E-11 T 25-04-2017 CLFO_RS02545 faf1faa230bf6c4ca89398f57dd2a4b8 234 Hamap MF_00013 Octanoyltransferase [lipB]. 3 212 32.955 T 25-04-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CLFO_RS02545 faf1faa230bf6c4ca89398f57dd2a4b8 234 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 77 92 - T 25-04-2017 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CLFO_RS02545 faf1faa230bf6c4ca89398f57dd2a4b8 234 PIRSF PIRSF016262 1 223 2.8E-62 T 25-04-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CLFO_RS14325 ffd4a8bb4669e8d6a6a8bab1e023c349 395 Gene3D G3DSA:3.40.718.10 81 296 3.6E-28 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS14325 ffd4a8bb4669e8d6a6a8bab1e023c349 395 Gene3D G3DSA:3.40.718.10 29 71 1.6E-4 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS14325 ffd4a8bb4669e8d6a6a8bab1e023c349 395 Pfam PF02504 Fatty acid synthesis protein 32 368 1.5E-70 T 25-04-2017 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CLFO_RS14325 ffd4a8bb4669e8d6a6a8bab1e023c349 395 PIRSF PIRSF036593 5 389 2.9E-191 T 25-04-2017 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit CLFO_RS14325 ffd4a8bb4669e8d6a6a8bab1e023c349 395 SUPERFAMILY SSF53659 31 294 1.09E-24 T 25-04-2017 CLFO_RS12370 87d232aec1f797d9b9862797209986f2 277 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 6 269 62.538 T 25-04-2017 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein CLFO_RS12370 87d232aec1f797d9b9862797209986f2 277 Pfam PF03618 Kinase/pyrophosphorylase 8 263 5.1E-102 T 25-04-2017 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 SMART SM00838 598 686 1.4E-59 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 Gene3D G3DSA:3.30.230.10 482 596 1.8E-51 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 SUPERFAMILY SSF50447 263 402 2.78E-39 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 Gene3D G3DSA:3.30.70.240 597 684 3.3E-37 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 SUPERFAMILY SSF52540 6 280 5.31E-110 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 Gene3D G3DSA:3.30.70.870 404 478 4.9E-38 T 25-04-2017 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 SUPERFAMILY SSF54211 477 597 7.33E-45 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 SUPERFAMILY SSF54980 601 688 1.26E-33 T 25-04-2017 IPR009022 Elongation factor G, III-V domain CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.8E-15 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.8E-15 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.8E-15 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 PRINTS PR00315 GTP-binding elongation factor signature 130 139 4.8E-15 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.8E-15 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 3.5E-35 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 Pfam PF14492 Elongation Factor G, domain II 402 476 8.9E-34 T 25-04-2017 IPR009022 Elongation factor G, III-V domain CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 SMART SM00889 478 596 3.3E-73 T 25-04-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 689 0.0 T 25-04-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 Pfam PF03764 Elongation factor G, domain IV 477 596 1.4E-47 T 25-04-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 Pfam PF03144 Elongation factor Tu domain 2 322 389 2.3E-17 T 25-04-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 Hamap MF_00054_B Elongation factor G [fusA]. 6 690 112.715 T 25-04-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 Pfam PF00679 Elongation factor G C-terminus 599 685 2.3E-34 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 Gene3D G3DSA:2.40.30.10 303 403 1.1E-41 T 25-04-2017 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 1.3E-67 T 25-04-2017 CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 25-04-2017 IPR031157 Tr-type G domain, conserved site CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 SUPERFAMILY SSF54980 402 479 1.83E-24 T 25-04-2017 IPR009022 Elongation factor G, III-V domain CLFO_RS19720 2bcaa393b7a053eff4581a73900527bd 691 Gene3D G3DSA:3.40.50.300 7 285 1.6E-106 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09705 066ce9a223639723ee9fca7f6b7d2fce 325 SUPERFAMILY SSF53067 118 307 3.1E-24 T 25-04-2017 CLFO_RS09705 066ce9a223639723ee9fca7f6b7d2fce 325 SUPERFAMILY SSF53067 7 88 3.1E-24 T 25-04-2017 CLFO_RS09705 066ce9a223639723ee9fca7f6b7d2fce 325 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 265 274 3.1E-14 T 25-04-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS09705 066ce9a223639723ee9fca7f6b7d2fce 325 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 163 184 3.1E-14 T 25-04-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS09705 066ce9a223639723ee9fca7f6b7d2fce 325 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 102 121 3.1E-14 T 25-04-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS09705 066ce9a223639723ee9fca7f6b7d2fce 325 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 3.1E-14 T 25-04-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS09705 066ce9a223639723ee9fca7f6b7d2fce 325 Pfam PF00814 Glycoprotease family 95 307 2.3E-33 T 25-04-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS09705 066ce9a223639723ee9fca7f6b7d2fce 325 Gene3D G3DSA:3.30.420.40 7 149 2.4E-9 T 25-04-2017 CLFO_RS09705 066ce9a223639723ee9fca7f6b7d2fce 325 Gene3D G3DSA:3.30.420.40 172 288 5.0E-5 T 25-04-2017 CLFO_RS09705 066ce9a223639723ee9fca7f6b7d2fce 325 ProSitePatterns PS01016 Glycoprotease family signature. 101 121 - T 25-04-2017 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 Pfam PF03129 Anticodon binding domain 374 461 2.7E-22 T 25-04-2017 IPR004154 Anticodon-binding CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 SUPERFAMILY SSF55681 6 377 1.26E-124 T 25-04-2017 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 4 464 52.08 T 25-04-2017 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 Gene3D G3DSA:3.30.930.10 138 370 1.6E-147 T 25-04-2017 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 Gene3D G3DSA:3.30.930.10 8 92 1.6E-147 T 25-04-2017 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 SUPERFAMILY SSF52954 361 464 1.28E-33 T 25-04-2017 IPR004154 Anticodon-binding CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 167 309 9.6E-9 T 25-04-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 Gene3D G3DSA:3.40.50.800 372 464 5.2E-37 T 25-04-2017 IPR004154 Anticodon-binding CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 6 245 1.8E-91 T 25-04-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 152 164 5.4E-54 T 25-04-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 329 341 5.4E-54 T 25-04-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 173 190 5.4E-54 T 25-04-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 205 222 5.4E-54 T 25-04-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 222 232 5.4E-54 T 25-04-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 26 40 5.4E-54 T 25-04-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS12380 0497a3736ff7bf995df5b3b23da61388 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 409 428 5.4E-54 T 25-04-2017 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 SUPERFAMILY SSF57938 133 214 4.58E-18 T 25-04-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 41.565 T 25-04-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 Gene3D G3DSA:1.10.287.110 2 102 6.3E-39 T 25-04-2017 IPR001623 DnaJ domain CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 Pfam PF00684 DnaJ central domain 146 210 7.5E-14 T 25-04-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 SUPERFAMILY SSF46565 2 105 5.5E-38 T 25-04-2017 IPR001623 DnaJ domain CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 353 1.4E-140 T 25-04-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 Pfam PF00226 DnaJ domain 5 67 4.0E-29 T 25-04-2017 IPR001623 DnaJ domain CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 SMART SM00271 4 62 2.3E-35 T 25-04-2017 IPR001623 DnaJ domain CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 PRINTS PR00625 DnaJ domain signature 42 62 1.6E-32 T 25-04-2017 IPR001623 DnaJ domain CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 PRINTS PR00625 DnaJ domain signature 25 40 1.6E-32 T 25-04-2017 IPR001623 DnaJ domain CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 PRINTS PR00625 DnaJ domain signature 62 81 1.6E-32 T 25-04-2017 IPR001623 DnaJ domain CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 PRINTS PR00625 DnaJ domain signature 7 25 1.6E-32 T 25-04-2017 IPR001623 DnaJ domain CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 Gene3D G3DSA:2.60.260.20 114 135 6.8E-21 T 25-04-2017 CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 Gene3D G3DSA:2.60.260.20 259 337 5.5E-22 T 25-04-2017 CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 Gene3D G3DSA:2.60.260.20 210 256 6.8E-21 T 25-04-2017 CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 SUPERFAMILY SSF49493 262 347 9.68E-24 T 25-04-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 Gene3D G3DSA:2.10.230.10 136 209 2.8E-19 T 25-04-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 Pfam PF01556 DnaJ C terminal domain 119 336 3.5E-43 T 25-04-2017 IPR002939 Chaperone DnaJ, C-terminal CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 SUPERFAMILY SSF49493 113 137 8.76E-21 T 25-04-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CLFO_RS12495 0c6a1c8f9e17b5ceea11d8d6a7629933 376 SUPERFAMILY SSF49493 203 270 8.76E-21 T 25-04-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CLFO_RS03680 eb6364002435de94edb44c2ebad54af0 543 SMART SM01027 253 382 4.4E-60 T 25-04-2017 IPR022712 Beta-Casp domain CLFO_RS03680 eb6364002435de94edb44c2ebad54af0 543 Gene3D G3DSA:3.60.15.10 136 265 2.7E-51 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS03680 eb6364002435de94edb44c2ebad54af0 543 Gene3D G3DSA:3.60.15.10 1 100 2.7E-51 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS03680 eb6364002435de94edb44c2ebad54af0 543 Pfam PF10996 Beta-Casp domain 253 381 3.4E-30 T 25-04-2017 IPR022712 Beta-Casp domain CLFO_RS03680 eb6364002435de94edb44c2ebad54af0 543 SUPERFAMILY SSF56281 1 467 1.97E-134 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS03680 eb6364002435de94edb44c2ebad54af0 543 SMART SM00849 13 241 2.8E-15 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS03680 eb6364002435de94edb44c2ebad54af0 543 Pfam PF16661 Metallo-beta-lactamase superfamily domain 19 192 3.6E-13 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS03680 eb6364002435de94edb44c2ebad54af0 543 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 396 459 8.5E-17 T 25-04-2017 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CLFO_RS05635 d12167d5fea9fefabc822d1b7f1a5481 454 PIRSF PIRSF000376 1 452 1.7E-130 T 25-04-2017 IPR016218 Acetyl-CoA decarbonylase/synthase complex, gamma subunit GO:0005506|GO:0008168|GO:0046356 CLFO_RS05635 d12167d5fea9fefabc822d1b7f1a5481 454 Pfam PF04060 Putative Fe-S cluster 13 43 1.6E-10 T 25-04-2017 IPR007202 4Fe-4S domain GO:0051536 CLFO_RS05635 d12167d5fea9fefabc822d1b7f1a5481 454 Pfam PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit 64 443 2.2E-86 T 25-04-2017 IPR016041 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel CLFO_RS19585 c34a0c38b24ae7ce3a440f1ed67837db 72 SUPERFAMILY SSF50249 1 70 6.0E-28 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS19585 c34a0c38b24ae7ce3a440f1ed67837db 72 SMART SM00316 4 72 3.7E-8 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS19585 c34a0c38b24ae7ce3a440f1ed67837db 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.6E-28 T 25-04-2017 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CLFO_RS19585 c34a0c38b24ae7ce3a440f1ed67837db 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 7.3E-37 T 25-04-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CLFO_RS19585 c34a0c38b24ae7ce3a440f1ed67837db 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.024 T 25-04-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CLFO_RS19585 c34a0c38b24ae7ce3a440f1ed67837db 72 Gene3D G3DSA:2.40.50.140 1 72 1.4E-38 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 Pfam PF02954 Bacterial regulatory protein, Fis family 538 577 3.9E-11 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 284 297 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 SMART SM00382 280 424 2.9E-13 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 SUPERFAMILY SSF55785 9 108 2.97E-13 T 25-04-2017 IPR000014 PAS domain CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 111 4.9E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 125 241 3.2E-14 T 25-04-2017 IPR000014 PAS domain CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 Gene3D G3DSA:3.30.450.20 7 120 8.3E-15 T 25-04-2017 CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 SUPERFAMILY SSF55785 127 227 4.01E-14 T 25-04-2017 IPR000014 PAS domain CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 474 483 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 SUPERFAMILY SSF52540 259 507 9.68E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 Pfam PF00158 Sigma-54 interaction domain 260 428 1.2E-67 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 Gene3D G3DSA:3.40.50.300 257 433 4.0E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 Pfam PF00989 PAS fold 12 110 2.1E-10 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 Pfam PF00989 PAS fold 130 230 5.3E-11 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 SUPERFAMILY SSF46689 529 580 8.06E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 SMART SM00091 10 76 2.7E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 SMART SM00091 128 193 4.8E-6 T 25-04-2017 IPR000014 PAS domain CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 Gene3D G3DSA:1.10.10.60 525 580 1.6E-13 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 543 560 2.4E-6 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 560 580 2.4E-6 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 347 362 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 Gene3D G3DSA:3.30.450.20 123 231 1.5E-13 T 25-04-2017 CLFO_RS18895 1772652768b684b797be50267bf3f55b 580 Gene3D G3DSA:1.10.8.60 434 510 1.3E-19 T 25-04-2017 CLFO_RS05060 ad22ac7844cfb4cb461af83c946d0986 456 SUPERFAMILY SSF53383 57 436 5.08E-67 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS05060 ad22ac7844cfb4cb461af83c946d0986 456 SMART SM00345 7 66 1.5E-9 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS05060 ad22ac7844cfb4cb461af83c946d0986 456 Gene3D G3DSA:1.10.10.10 3 65 1.5E-18 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS05060 ad22ac7844cfb4cb461af83c946d0986 456 SUPERFAMILY SSF46785 2 76 1.53E-14 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS05060 ad22ac7844cfb4cb461af83c946d0986 456 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 65 1.5E-9 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS05060 ad22ac7844cfb4cb461af83c946d0986 456 Pfam PF00155 Aminotransferase class I and II 94 388 2.9E-22 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS05060 ad22ac7844cfb4cb461af83c946d0986 456 Gene3D G3DSA:3.40.640.10 106 330 5.9E-62 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 SUPERFAMILY SSF50249 132 198 6.24E-18 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 Gene3D G3DSA:2.40.50.140 136 197 7.9E-28 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 SMART SM00316 133 199 6.3E-7 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 Pfam PF08529 NusA N-terminal domain 4 123 3.8E-45 T 25-04-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 Gene3D G3DSA:3.30.300.20 277 344 1.4E-30 T 25-04-2017 IPR015946 K homology domain-like, alpha/beta CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 Pfam PF13184 NusA-like KH domain 229 294 2.7E-29 T 25-04-2017 IPR025249 KH domain, NusA-like GO:0003723 CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 Pfam PF00575 S1 RNA binding domain 135 194 1.3E-5 T 25-04-2017 IPR003029 S1 domain GO:0003676 CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 Gene3D G3DSA:3.30.300.20 198 276 6.0E-37 T 25-04-2017 IPR015946 K homology domain-like, alpha/beta CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 SUPERFAMILY SSF54814 278 341 1.44E-14 T 25-04-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 SUPERFAMILY SSF69705 1 125 3.66E-44 T 25-04-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 SUPERFAMILY SSF54814 199 277 1.24E-30 T 25-04-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 4.2E-133 T 25-04-2017 IPR010213 Transcription termination factor NusA GO:0003723 CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 347 30.074 T 25-04-2017 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CLFO_RS10895 d76a1007272f466072b703626ca3cfc2 347 Gene3D G3DSA:3.30.1480.10 1 123 2.2E-48 T 25-04-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CLFO_RS13135 be60face548b1f673cb69633a950a840 516 Gene3D G3DSA:3.40.190.10 90 204 1.7E-10 T 25-04-2017 CLFO_RS13135 be60face548b1f673cb69633a950a840 516 Gene3D G3DSA:3.40.190.10 205 434 1.1E-46 T 25-04-2017 CLFO_RS13135 be60face548b1f673cb69633a950a840 516 SUPERFAMILY SSF53850 74 513 1.87E-50 T 25-04-2017 CLFO_RS13135 be60face548b1f673cb69633a950a840 516 Pfam PF13416 Bacterial extracellular solute-binding protein 98 438 8.3E-32 T 25-04-2017 CLFO_RS11995 4fc77933ca15d4f5f1a810265e4bf060 743 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 18 183 2.3E-27 T 25-04-2017 IPR006483 CRISPR-associated Cas3-HD domain CLFO_RS11995 4fc77933ca15d4f5f1a810265e4bf060 743 Gene3D G3DSA:1.10.3210.10 16 110 6.9E-9 T 25-04-2017 IPR006674 HD domain CLFO_RS11995 4fc77933ca15d4f5f1a810265e4bf060 743 Gene3D G3DSA:3.40.50.300 204 397 1.2E-9 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11995 4fc77933ca15d4f5f1a810265e4bf060 743 SUPERFAMILY SSF52540 316 540 8.88E-28 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11995 4fc77933ca15d4f5f1a810265e4bf060 743 SUPERFAMILY SSF52540 223 271 8.88E-28 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11995 4fc77933ca15d4f5f1a810265e4bf060 743 Pfam PF01966 HD domain 19 112 4.5E-9 T 25-04-2017 IPR006674 HD domain CLFO_RS11995 4fc77933ca15d4f5f1a810265e4bf060 743 Pfam PF00271 Helicase conserved C-terminal domain 428 533 1.0E-4 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS11995 4fc77933ca15d4f5f1a810265e4bf060 743 Gene3D G3DSA:3.40.50.300 421 543 5.1E-9 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11995 4fc77933ca15d4f5f1a810265e4bf060 743 SMART SM00487 211 419 2.8E-6 T 25-04-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLFO_RS11995 4fc77933ca15d4f5f1a810265e4bf060 743 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 233 567 7.5E-69 T 25-04-2017 IPR006474 Helicase Cas3, CRISPR-associated, core CLFO_RS11995 4fc77933ca15d4f5f1a810265e4bf060 743 SUPERFAMILY SSF109604 19 144 7.46E-11 T 25-04-2017 CLFO_RS19555 095dc7a60ebf8518034f30d2a70ab671 113 Pfam PF01196 Ribosomal protein L17 17 113 5.7E-40 T 25-04-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19555 095dc7a60ebf8518034f30d2a70ab671 113 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 113 1.0E-46 T 25-04-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19555 095dc7a60ebf8518034f30d2a70ab671 113 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 2 113 28.172 T 25-04-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19555 095dc7a60ebf8518034f30d2a70ab671 113 Gene3D G3DSA:3.90.1030.10 3 113 1.4E-49 T 25-04-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19555 095dc7a60ebf8518034f30d2a70ab671 113 ProSitePatterns PS01167 Ribosomal protein L17 signature. 31 53 - T 25-04-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19555 095dc7a60ebf8518034f30d2a70ab671 113 SUPERFAMILY SSF64263 3 113 7.98E-46 T 25-04-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS02205 4e55237228f501a770bb31ee3f0f7000 182 SMART SM00877 95 173 1.8E-23 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS02205 4e55237228f501a770bb31ee3f0f7000 182 SMART SM00877 3 77 7.5E-27 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS02205 4e55237228f501a770bb31ee3f0f7000 182 SUPERFAMILY SSF143414 3 94 5.23E-25 T 25-04-2017 CLFO_RS02205 4e55237228f501a770bb31ee3f0f7000 182 SUPERFAMILY SSF143414 95 181 3.53E-22 T 25-04-2017 CLFO_RS02205 4e55237228f501a770bb31ee3f0f7000 182 Pfam PF00936 BMC domain 4 75 9.5E-23 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS02205 4e55237228f501a770bb31ee3f0f7000 182 Pfam PF00936 BMC domain 96 173 6.7E-19 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS02205 4e55237228f501a770bb31ee3f0f7000 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 60 8.0E-22 T 25-04-2017 CLFO_RS02205 4e55237228f501a770bb31ee3f0f7000 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 154 8.0E-9 T 25-04-2017 CLFO_RS02205 4e55237228f501a770bb31ee3f0f7000 182 PIRSF PIRSF034834 1 182 5.3E-63 T 25-04-2017 IPR011238 Polyhedral organelle shell protein PduT CLFO_RS14350 70a511b2c961a1249c14de51bd9dbab6 105 Pfam PF00085 Thioredoxin 3 104 7.4E-24 T 25-04-2017 IPR013766 Thioredoxin domain GO:0045454 CLFO_RS14350 70a511b2c961a1249c14de51bd9dbab6 105 Gene3D G3DSA:3.40.30.10 2 104 6.0E-27 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS14350 70a511b2c961a1249c14de51bd9dbab6 105 PIRSF PIRSF000077 1 105 2.1E-23 T 25-04-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLFO_RS14350 70a511b2c961a1249c14de51bd9dbab6 105 SUPERFAMILY SSF52833 4 104 2.97E-26 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS14350 70a511b2c961a1249c14de51bd9dbab6 105 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 25-04-2017 IPR017937 Thioredoxin, conserved site GO:0045454 CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 Gene3D G3DSA:3.40.50.300 333 567 3.5E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 Gene3D G3DSA:3.40.50.300 142 286 2.8E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 Gene3D G3DSA:3.40.50.300 5 102 2.8E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 SMART SM00382 28 239 1.8E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 SMART SM00382 356 531 1.7E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 ProSitePatterns PS00211 ABC transporters family signature. 449 463 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 SUPERFAMILY SSF52540 318 537 4.64E-48 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 SUPERFAMILY SSF52540 4 240 4.46E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 Pfam PF16326 ABC transporter C-terminal domain 573 631 3.3E-9 T 25-04-2017 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 Pfam PF00005 ABC transporter 20 194 1.2E-26 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 Pfam PF00005 ABC transporter 348 477 4.1E-22 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS01865 6a1ee9ce73952f600820b1b85ca63b30 635 Pfam PF12848 ABC transporter 233 321 1.3E-21 T 25-04-2017 IPR032781 ABC-transporter extension domain CLFO_RS16635 dceeb8406c07ece85d00854923efb8c7 280 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 168 6.3E-28 T 25-04-2017 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CLFO_RS16635 dceeb8406c07ece85d00854923efb8c7 280 Gene3D G3DSA:3.30.465.10 62 168 2.7E-17 T 25-04-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLFO_RS16635 dceeb8406c07ece85d00854923efb8c7 280 SUPERFAMILY SSF55447 179 275 8.9E-13 T 25-04-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLFO_RS16635 dceeb8406c07ece85d00854923efb8c7 280 Gene3D G3DSA:3.30.43.10 3 57 1.1E-7 T 25-04-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CLFO_RS16635 dceeb8406c07ece85d00854923efb8c7 280 SUPERFAMILY SSF56176 3 168 6.95E-31 T 25-04-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLFO_RS16635 dceeb8406c07ece85d00854923efb8c7 280 Gene3D G3DSA:3.30.390.50 189 271 2.0E-6 T 25-04-2017 CLFO_RS16635 dceeb8406c07ece85d00854923efb8c7 280 SMART SM01092 180 274 0.0016 T 25-04-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLFO_RS05525 1653c36edda7bccf837ab3b11741edce 339 Gene3D G3DSA:3.30.930.10 9 339 6.3E-134 T 25-04-2017 CLFO_RS05525 1653c36edda7bccf837ab3b11741edce 339 Pfam PF01409 tRNA synthetases class II core domain (F) 93 339 1.8E-106 T 25-04-2017 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CLFO_RS05525 1653c36edda7bccf837ab3b11741edce 339 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 339 48.459 T 25-04-2017 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CLFO_RS05525 1653c36edda7bccf837ab3b11741edce 339 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 1.6E-24 T 25-04-2017 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CLFO_RS05525 1653c36edda7bccf837ab3b11741edce 339 SUPERFAMILY SSF46589 15 99 2.56E-20 T 25-04-2017 IPR010978 tRNA-binding arm GO:0000166 CLFO_RS05525 1653c36edda7bccf837ab3b11741edce 339 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 339 2.4E-110 T 25-04-2017 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CLFO_RS05525 1653c36edda7bccf837ab3b11741edce 339 SUPERFAMILY SSF55681 93 339 7.57E-84 T 25-04-2017 CLFO_RS18385 bf3c086211abcf47d5d039f7fcbb738e 459 PIRSF PIRSF006603 1 448 2.4E-94 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS18385 bf3c086211abcf47d5d039f7fcbb738e 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 415 8.5E-65 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS18385 bf3c086211abcf47d5d039f7fcbb738e 459 Pfam PF01554 MatE 247 401 3.3E-22 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS18385 bf3c086211abcf47d5d039f7fcbb738e 459 Pfam PF01554 MatE 22 183 2.1E-33 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS19425 b181e50340ce66c3b32d22dd8f7a649f 615 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 533 2.0E-161 T 25-04-2017 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CLFO_RS19425 b181e50340ce66c3b32d22dd8f7a649f 615 Pfam PF13537 Glutamine amidotransferase domain 48 169 1.3E-44 T 25-04-2017 IPR017932 Glutamine amidotransferase type 2 domain CLFO_RS19425 b181e50340ce66c3b32d22dd8f7a649f 615 PIRSF PIRSF001589 1 614 1.9E-138 T 25-04-2017 CLFO_RS19425 b181e50340ce66c3b32d22dd8f7a649f 615 Gene3D G3DSA:3.40.50.620 457 597 1.7E-79 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS19425 b181e50340ce66c3b32d22dd8f7a649f 615 Gene3D G3DSA:3.40.50.620 226 400 1.7E-79 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS19425 b181e50340ce66c3b32d22dd8f7a649f 615 SUPERFAMILY SSF52402 450 575 1.64E-68 T 25-04-2017 CLFO_RS19425 b181e50340ce66c3b32d22dd8f7a649f 615 SUPERFAMILY SSF52402 221 394 1.64E-68 T 25-04-2017 CLFO_RS19425 b181e50340ce66c3b32d22dd8f7a649f 615 Pfam PF00733 Asparagine synthase 242 605 1.8E-87 T 25-04-2017 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CLFO_RS19425 b181e50340ce66c3b32d22dd8f7a649f 615 SUPERFAMILY SSF56235 1 226 5.23E-61 T 25-04-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CLFO_RS19425 b181e50340ce66c3b32d22dd8f7a649f 615 Gene3D G3DSA:3.60.20.10 1 225 2.0E-68 T 25-04-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 PIRSF PIRSF002401 1 375 5.3E-141 T 25-04-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 358 426 2.9E-23 T 25-04-2017 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 25-04-2017 IPR006074 GTP1/OBG, conserved site GO:0005525 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 329 4.2E-139 T 25-04-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 SUPERFAMILY SSF82051 1 157 1.44E-54 T 25-04-2017 IPR006169 GTP1/OBG domain GO:0005525 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 Pfam PF01926 50S ribosome-binding GTPase 160 283 1.7E-24 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 SUPERFAMILY SSF102741 358 427 2.48E-19 T 25-04-2017 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 Hamap MF_01454 GTPase Obg [obg]. 1 330 48.279 T 25-04-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 Gene3D G3DSA:2.70.210.12 1 155 1.3E-55 T 25-04-2017 IPR006169 GTP1/OBG domain GO:0005525 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 7.2E-36 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 7.2E-36 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 7.2E-36 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 7.2E-36 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 Gene3D G3DSA:3.40.50.300 159 334 3.7E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 SUPERFAMILY SSF52540 160 332 2.14E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 Pfam PF01018 GTP1/OBG 2 157 7.1E-60 T 25-04-2017 IPR006169 GTP1/OBG domain GO:0005525 CLFO_RS08540 d8f4405119d359eaec51b8fb356ec0bc 427 Pfam PF09269 Domain of unknown function (DUF1967) 358 425 9.3E-25 T 25-04-2017 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 CLFO_RS16685 7ca95395bac2ce8299f435d1479a466b 402 PIRSF PIRSF036483 1 402 5.4E-139 T 25-04-2017 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 CLFO_RS16685 7ca95395bac2ce8299f435d1479a466b 402 Gene3D G3DSA:3.40.50.450 3 231 1.7E-62 T 25-04-2017 CLFO_RS16685 7ca95395bac2ce8299f435d1479a466b 402 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 101 117 2.0E-13 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS16685 7ca95395bac2ce8299f435d1479a466b 402 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 174 190 2.0E-13 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS16685 7ca95395bac2ce8299f435d1479a466b 402 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 2.0E-13 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS16685 7ca95395bac2ce8299f435d1479a466b 402 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 2.0E-13 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS16685 7ca95395bac2ce8299f435d1479a466b 402 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 232 244 2.0E-13 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS16685 7ca95395bac2ce8299f435d1479a466b 402 SUPERFAMILY SSF53784 3 399 3.92E-105 T 25-04-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS16685 7ca95395bac2ce8299f435d1479a466b 402 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 2 396 42.852 T 25-04-2017 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 CLFO_RS16685 7ca95395bac2ce8299f435d1479a466b 402 Pfam PF00365 Phosphofructokinase 7 319 2.3E-59 T 25-04-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS04985 54d5f90d4305fe806d8d43fcae9da2f4 93 Pfam PF11823 Protein of unknown function (DUF3343) 8 75 9.5E-24 T 25-04-2017 IPR021778 Protein of unknown function DUF3343 CLFO_RS21000 bb44faa6bd835b96c0b6861d4ae8aeef 229 SMART SM00862 150 226 1.6E-23 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS21000 bb44faa6bd835b96c0b6861d4ae8aeef 229 SMART SM00448 3 113 9.8E-49 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS21000 bb44faa6bd835b96c0b6861d4ae8aeef 229 Gene3D G3DSA:3.40.50.2300 2 121 6.1E-44 T 25-04-2017 CLFO_RS21000 bb44faa6bd835b96c0b6861d4ae8aeef 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 1.2E-26 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS21000 bb44faa6bd835b96c0b6861d4ae8aeef 229 SUPERFAMILY SSF46894 126 226 1.08E-29 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS21000 bb44faa6bd835b96c0b6861d4ae8aeef 229 Pfam PF00072 Response regulator receiver domain 5 114 3.8E-31 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS21000 bb44faa6bd835b96c0b6861d4ae8aeef 229 Gene3D G3DSA:1.10.10.10 127 227 1.3E-34 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS21000 bb44faa6bd835b96c0b6861d4ae8aeef 229 SUPERFAMILY SSF52172 4 119 6.55E-43 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS01895 e5cf113b7cd26cc5f803ab5eaacb6104 402 Pfam PF01636 Phosphotransferase enzyme family 33 264 1.3E-12 T 25-04-2017 IPR002575 Aminoglycoside phosphotransferase CLFO_RS01895 e5cf113b7cd26cc5f803ab5eaacb6104 402 SUPERFAMILY SSF56112 2 399 1.68E-93 T 25-04-2017 IPR011009 Protein kinase-like domain CLFO_RS01895 e5cf113b7cd26cc5f803ab5eaacb6104 402 Gene3D G3DSA:3.90.1200.10 95 306 1.3E-16 T 25-04-2017 CLFO_RS01895 e5cf113b7cd26cc5f803ab5eaacb6104 402 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 33 399 5.7E-132 T 25-04-2017 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 CLFO_RS01895 e5cf113b7cd26cc5f803ab5eaacb6104 402 PIRSF PIRSF031134 1 402 2.5E-160 T 25-04-2017 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 CLFO_RS01895 e5cf113b7cd26cc5f803ab5eaacb6104 402 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 402 185.051 T 25-04-2017 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 CLFO_RS11295 10f1a3cc1b9ed0f7faba29f1378b75a8 192 SUPERFAMILY SSF54637 77 183 3.16E-22 T 25-04-2017 IPR029069 HotDog domain CLFO_RS11295 10f1a3cc1b9ed0f7faba29f1378b75a8 192 PIRSF PIRSF037733 5 191 4.5E-78 T 25-04-2017 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 CLFO_RS11295 10f1a3cc1b9ed0f7faba29f1378b75a8 192 Gene3D G3DSA:3.10.129.10 65 189 3.2E-26 T 25-04-2017 IPR029069 HotDog domain CLFO_RS11295 10f1a3cc1b9ed0f7faba29f1378b75a8 192 Gene3D G3DSA:1.10.10.10 6 45 9.2E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS11295 10f1a3cc1b9ed0f7faba29f1378b75a8 192 SUPERFAMILY SSF46785 9 56 3.2E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS11295 10f1a3cc1b9ed0f7faba29f1378b75a8 192 Pfam PF03061 Thioesterase superfamily 127 170 3.7E-6 T 25-04-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 CLFO_RS11295 10f1a3cc1b9ed0f7faba29f1378b75a8 192 Pfam PF08220 DeoR-like helix-turn-helix domain 12 45 2.7E-5 T 25-04-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLFO_RS05560 a5b44d9a4ef01c311c2772d2c5d44cc9 413 Pfam PF00860 Permease family 24 381 1.7E-84 T 25-04-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLFO_RS05560 a5b44d9a4ef01c311c2772d2c5d44cc9 413 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 25-04-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CLFO_RS05560 a5b44d9a4ef01c311c2772d2c5d44cc9 413 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 23 409 3.3E-94 T 25-04-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CLFO_RS11185 ce0eab51679ca67337dd21bdbe7c66a6 511 SUPERFAMILY SSF52540 191 504 4.66E-43 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11185 ce0eab51679ca67337dd21bdbe7c66a6 511 Gene3D G3DSA:3.30.230.10 9 167 9.1E-37 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS11185 ce0eab51679ca67337dd21bdbe7c66a6 511 SMART SM00382 212 376 0.0083 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS11185 ce0eab51679ca67337dd21bdbe7c66a6 511 Gene3D G3DSA:3.40.50.300 191 392 3.9E-46 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11185 ce0eab51679ca67337dd21bdbe7c66a6 511 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 11 503 1.2E-187 T 25-04-2017 IPR004482 Mg chelatase-related protein CLFO_RS11185 ce0eab51679ca67337dd21bdbe7c66a6 511 Pfam PF01078 Magnesium chelatase, subunit ChlI 192 400 4.3E-91 T 25-04-2017 IPR000523 Magnesium chelatase ChlI domain CLFO_RS11185 ce0eab51679ca67337dd21bdbe7c66a6 511 SUPERFAMILY SSF54211 11 168 1.25E-36 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS11185 ce0eab51679ca67337dd21bdbe7c66a6 511 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 408 503 7.0E-33 T 25-04-2017 IPR025158 Mg chelatase-related protein, C-terminal domain CLFO_RS11185 ce0eab51679ca67337dd21bdbe7c66a6 511 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 142 2.0E-46 T 25-04-2017 CLFO_RS04440 34d2bb8693dd1f1f76915944cb5a4cf0 712 SUPERFAMILY SSF51998 123 674 4.88E-162 T 25-04-2017 CLFO_RS04440 34d2bb8693dd1f1f76915944cb5a4cf0 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 122 690 1.7E-192 T 25-04-2017 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CLFO_RS04440 34d2bb8693dd1f1f76915944cb5a4cf0 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 121 689 2.2E-171 T 25-04-2017 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CLFO_RS04440 34d2bb8693dd1f1f76915944cb5a4cf0 712 Pfam PF03477 ATP cone domain 5 94 3.0E-20 T 25-04-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CLFO_RS04440 34d2bb8693dd1f1f76915944cb5a4cf0 712 Gene3D G3DSA:3.20.70.20 128 673 6.3E-209 T 25-04-2017 CLFO_RS12285 3954cb427ce7ece8cde92b5f6c0beffb 313 SUPERFAMILY SSF103481 61 158 1.83E-13 T 25-04-2017 CLFO_RS12285 3954cb427ce7ece8cde92b5f6c0beffb 313 SUPERFAMILY SSF103481 205 305 1.83E-13 T 25-04-2017 CLFO_RS12285 3954cb427ce7ece8cde92b5f6c0beffb 313 Pfam PF00892 EamA-like transporter family 23 157 7.8E-24 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS12285 3954cb427ce7ece8cde92b5f6c0beffb 313 Pfam PF00892 EamA-like transporter family 171 304 2.5E-24 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS06295 4ef109409a271a49ed19ecde86958f8e 268 Gene3D G3DSA:2.40.50.100 168 231 5.8E-4 T 25-04-2017 CLFO_RS06295 4ef109409a271a49ed19ecde86958f8e 268 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 6 261 2.3E-112 T 25-04-2017 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family CLFO_RS00850 6947d29f8705bb8206830ec861edd054 196 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 196 41.084 T 25-04-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CLFO_RS00850 6947d29f8705bb8206830ec861edd054 196 Gene3D G3DSA:3.30.230.40 3 90 5.1E-37 T 25-04-2017 CLFO_RS00850 6947d29f8705bb8206830ec861edd054 196 Gene3D G3DSA:3.30.230.40 92 196 8.7E-33 T 25-04-2017 CLFO_RS00850 6947d29f8705bb8206830ec861edd054 196 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 25-04-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CLFO_RS00850 6947d29f8705bb8206830ec861edd054 196 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 1.9E-66 T 25-04-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CLFO_RS00850 6947d29f8705bb8206830ec861edd054 196 SUPERFAMILY SSF54211 89 181 1.97E-35 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS00850 6947d29f8705bb8206830ec861edd054 196 SUPERFAMILY SSF54211 4 88 3.54E-31 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS00850 6947d29f8705bb8206830ec861edd054 196 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 25-04-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CLFO_RS03735 c297698298b73cad70296971545b7605 495 SMART SM00858 11 82 1.3E-17 T 25-04-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 CLFO_RS03735 c297698298b73cad70296971545b7605 495 Pfam PF08666 SAF domain 11 82 3.6E-15 T 25-04-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 CLFO_RS03735 c297698298b73cad70296971545b7605 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 494 1.6E-162 T 25-04-2017 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CLFO_RS13180 e5c72e2a537cd57b033d24cdb09c527b 132 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 5 77 3.7E-9 T 25-04-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CLFO_RS13180 e5c72e2a537cd57b033d24cdb09c527b 132 SUPERFAMILY SSF50475 2 127 1.88E-20 T 25-04-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CLFO_RS13180 e5c72e2a537cd57b033d24cdb09c527b 132 Gene3D G3DSA:2.30.110.10 1 130 4.7E-44 T 25-04-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CLFO_RS01000 5cf109914c6f485ae5891915136e44e9 177 Hamap MF_01396 ATP synthase subunit c [atpH]. 103 170 14.565 T 25-04-2017 CLFO_RS01000 5cf109914c6f485ae5891915136e44e9 177 SUPERFAMILY SSF81333 98 172 1.44E-14 T 25-04-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLFO_RS01000 5cf109914c6f485ae5891915136e44e9 177 Gene3D G3DSA:1.20.20.10 97 171 7.6E-17 T 25-04-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CLFO_RS01000 5cf109914c6f485ae5891915136e44e9 177 Gene3D G3DSA:1.20.20.10 14 88 1.4E-18 T 25-04-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CLFO_RS01000 5cf109914c6f485ae5891915136e44e9 177 PRINTS PR00124 ATP synthase C subunit signature 22 41 7.9E-15 T 25-04-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CLFO_RS01000 5cf109914c6f485ae5891915136e44e9 177 PRINTS PR00124 ATP synthase C subunit signature 60 85 7.9E-15 T 25-04-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CLFO_RS01000 5cf109914c6f485ae5891915136e44e9 177 PRINTS PR00124 ATP synthase C subunit signature 43 58 7.9E-15 T 25-04-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CLFO_RS01000 5cf109914c6f485ae5891915136e44e9 177 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 113 170 4.2E-14 T 25-04-2017 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CLFO_RS01000 5cf109914c6f485ae5891915136e44e9 177 SUPERFAMILY SSF81333 16 89 5.36E-15 T 25-04-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLFO_RS01000 5cf109914c6f485ae5891915136e44e9 177 Pfam PF00137 ATP synthase subunit C 105 167 7.5E-14 T 25-04-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLFO_RS01000 5cf109914c6f485ae5891915136e44e9 177 Pfam PF00137 ATP synthase subunit C 22 84 3.4E-12 T 25-04-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLFO_RS01000 5cf109914c6f485ae5891915136e44e9 177 Hamap MF_01396 ATP synthase subunit c [atpH]. 20 87 14.582 T 25-04-2017 CLFO_RS12310 e164840eae3fe17c2800dbd3f4873e05 224 SMART SM00448 2 113 1.7E-38 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS12310 e164840eae3fe17c2800dbd3f4873e05 224 SMART SM00862 146 220 2.5E-19 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS12310 e164840eae3fe17c2800dbd3f4873e05 224 SUPERFAMILY SSF52172 1 180 1.28E-43 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS12310 e164840eae3fe17c2800dbd3f4873e05 224 Gene3D G3DSA:3.40.50.2300 1 125 2.4E-40 T 25-04-2017 CLFO_RS12310 e164840eae3fe17c2800dbd3f4873e05 224 Pfam PF00072 Response regulator receiver domain 4 113 1.4E-30 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS12310 e164840eae3fe17c2800dbd3f4873e05 224 Gene3D G3DSA:1.10.10.10 126 221 3.0E-28 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12310 e164840eae3fe17c2800dbd3f4873e05 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 219 3.8E-22 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS00590 54f33486cd30dee920d9aeb32f66643b 80 PIRSF PIRSF038881 1 80 1.5E-30 T 25-04-2017 IPR025490 RNA-binding protein, HP1423 type CLFO_RS00590 54f33486cd30dee920d9aeb32f66643b 80 Pfam PF01479 S4 domain 1 47 1.2E-12 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS00590 54f33486cd30dee920d9aeb32f66643b 80 Gene3D G3DSA:3.10.290.10 1 76 9.5E-24 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS00590 54f33486cd30dee920d9aeb32f66643b 80 SMART SM00363 1 61 4.1E-13 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS00590 54f33486cd30dee920d9aeb32f66643b 80 SUPERFAMILY SSF55174 1 73 6.54E-21 T 25-04-2017 CLFO_RS18255 df03b8badd4beec2ab3f41c05de537b8 53 SUPERFAMILY SSF47240 2 51 5.14E-7 T 25-04-2017 IPR009078 Ferritin-like superfamily CLFO_RS18255 df03b8badd4beec2ab3f41c05de537b8 53 Pfam PF07875 Coat F domain 1 53 3.1E-20 T 25-04-2017 IPR012851 Spore coat protein CotF-like CLFO_RS07915 b682db2fa226435d784b77a19053d617 390 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 390 151.885 T 25-04-2017 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CLFO_RS07915 b682db2fa226435d784b77a19053d617 390 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 7.3E-71 T 25-04-2017 IPR020536 Thil, AANH domain GO:0004810 CLFO_RS07915 b682db2fa226435d784b77a19053d617 390 SMART SM00981 73 165 2.6E-23 T 25-04-2017 IPR004114 THUMP domain GO:0003723 CLFO_RS07915 b682db2fa226435d784b77a19053d617 390 SUPERFAMILY SSF143437 3 173 3.14E-51 T 25-04-2017 CLFO_RS07915 b682db2fa226435d784b77a19053d617 390 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 5 371 6.1E-118 T 25-04-2017 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CLFO_RS07915 b682db2fa226435d784b77a19053d617 390 Pfam PF02926 THUMP domain 46 160 1.2E-19 T 25-04-2017 IPR004114 THUMP domain GO:0003723 CLFO_RS07915 b682db2fa226435d784b77a19053d617 390 Gene3D G3DSA:3.40.50.620 173 333 3.5E-53 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS07915 b682db2fa226435d784b77a19053d617 390 SUPERFAMILY SSF52402 174 382 2.09E-51 T 25-04-2017 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 24 - T 25-04-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 Pfam PF01588 Putative tRNA binding domain 559 650 2.4E-31 T 25-04-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 Gene3D G3DSA:1.10.730.10 340 511 3.6E-53 T 25-04-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 258 273 7.0E-31 T 25-04-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 7.0E-31 T 25-04-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 7.0E-31 T 25-04-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 225 236 7.0E-31 T 25-04-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 350 361 7.0E-31 T 25-04-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 7.0E-31 T 25-04-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 Gene3D G3DSA:3.40.50.620 3 114 1.8E-73 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 Gene3D G3DSA:3.40.50.620 227 330 1.8E-73 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 SUPERFAMILY SSF47323 353 566 6.92E-44 T 25-04-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 Pfam PF09334 tRNA synthetases class I (M) 145 362 3.2E-67 T 25-04-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 Pfam PF08264 Anticodon-binding domain of tRNA 393 536 2.1E-10 T 25-04-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 510 49.523 T 25-04-2017 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 Gene3D G3DSA:2.170.220.10 117 226 4.2E-47 T 25-04-2017 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 515 651 1.6E-43 T 25-04-2017 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 SUPERFAMILY SSF50249 552 651 5.14E-37 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 3 133 1.5E-13 T 25-04-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 SUPERFAMILY SSF52374 3 349 1.54E-108 T 25-04-2017 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 512 2.1E-166 T 25-04-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CLFO_RS00435 2603bd6065b9ae1e0d70c43565b0f28b 653 Gene3D G3DSA:2.40.50.140 546 651 1.3E-43 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS08585 65cdc55828364d3352b216210f573256 820 SUPERFAMILY SSF47323 621 819 8.6E-42 T 25-04-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 574 1.5E-275 T 25-04-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 Gene3D G3DSA:1.10.730.10 607 755 6.2E-51 T 25-04-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 SUPERFAMILY SSF50677 224 415 1.15E-55 T 25-04-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 Pfam PF08264 Anticodon-binding domain of tRNA 656 781 2.8E-26 T 25-04-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 618 2.2E-25 T 25-04-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 Gene3D G3DSA:3.40.50.620 3 220 8.7E-162 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS08585 65cdc55828364d3352b216210f573256 820 Gene3D G3DSA:3.40.50.620 425 606 8.7E-162 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS08585 65cdc55828364d3352b216210f573256 820 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 403 2.5E-73 T 25-04-2017 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 Gene3D G3DSA:3.90.740.10 221 424 1.5E-59 T 25-04-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 25-04-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 Pfam PF09334 tRNA synthetases class I (M) 35 180 1.8E-24 T 25-04-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 SUPERFAMILY SSF52374 4 224 4.12E-152 T 25-04-2017 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 SUPERFAMILY SSF52374 416 627 4.12E-152 T 25-04-2017 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 819 23.689 T 25-04-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 8.9E-54 T 25-04-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 527 549 8.9E-54 T 25-04-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 8.9E-54 T 25-04-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 560 570 8.9E-54 T 25-04-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 8.9E-54 T 25-04-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 8.9E-54 T 25-04-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLFO_RS08585 65cdc55828364d3352b216210f573256 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 488 506 8.9E-54 T 25-04-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CLFO_RS19465 a142bc28ac6e34698368bf7e98e0d0f1 177 Gene3D G3DSA:3.40.50.360 1 113 4.9E-13 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS19465 a142bc28ac6e34698368bf7e98e0d0f1 177 SUPERFAMILY SSF52218 2 136 3.55E-18 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS19465 a142bc28ac6e34698368bf7e98e0d0f1 177 Pfam PF12724 Flavodoxin domain 5 138 4.4E-20 T 25-04-2017 IPR026816 Flavodoxin domain CLFO_RS00665 ff31dd858b3efa69ba4160522da9a939 259 Pfam PF07833 Copper amine oxidase N-terminal domain 69 112 3.8E-9 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS00665 ff31dd858b3efa69ba4160522da9a939 259 Pfam PF07833 Copper amine oxidase N-terminal domain 51 98 1.7E-9 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS00665 ff31dd858b3efa69ba4160522da9a939 259 Gene3D G3DSA:3.30.457.10 72 100 6.2E-7 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS00665 ff31dd858b3efa69ba4160522da9a939 259 SUPERFAMILY SSF55383 65 93 9.42E-7 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02385 31b553db0d67144d83877fec89323240 258 Gene3D G3DSA:3.30.230.70 4 238 8.6E-35 T 25-04-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLFO_RS02385 31b553db0d67144d83877fec89323240 258 Pfam PF03725 3' exoribonuclease family, domain 2 159 225 2.2E-13 T 25-04-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLFO_RS02385 31b553db0d67144d83877fec89323240 258 Hamap MF_00564 Ribonuclease PH [rph]. 2 238 47.337 T 25-04-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 CLFO_RS02385 31b553db0d67144d83877fec89323240 258 SUPERFAMILY SSF55666 154 244 3.53E-24 T 25-04-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLFO_RS02385 31b553db0d67144d83877fec89323240 258 Pfam PF01138 3' exoribonuclease family, domain 1 11 141 3.5E-24 T 25-04-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CLFO_RS02385 31b553db0d67144d83877fec89323240 258 SUPERFAMILY SSF54211 3 182 3.09E-45 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS02385 31b553db0d67144d83877fec89323240 258 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 237 3.5E-118 T 25-04-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 CLFO_RS02385 31b553db0d67144d83877fec89323240 258 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 25-04-2017 IPR018336 Ribonuclease PH, conserved site CLFO_RS00565 c8857f65bdf1f510c93adf94fc82426e 319 SUPERFAMILY SSF54534 182 276 2.09E-31 T 25-04-2017 CLFO_RS00565 c8857f65bdf1f510c93adf94fc82426e 319 Pfam PF13624 SurA N-terminal domain 5 158 3.3E-21 T 25-04-2017 CLFO_RS00565 c8857f65bdf1f510c93adf94fc82426e 319 SUPERFAMILY SSF109998 35 215 1.47E-29 T 25-04-2017 IPR027304 Trigger factor/SurA domain CLFO_RS00565 c8857f65bdf1f510c93adf94fc82426e 319 Gene3D G3DSA:3.10.50.40 184 299 6.7E-40 T 25-04-2017 CLFO_RS00565 c8857f65bdf1f510c93adf94fc82426e 319 Pfam PF13616 PPIC-type PPIASE domain 188 276 1.4E-24 T 25-04-2017 CLFO_RS04640 b90bf4da2f14b0205636e2e65c24736f 444 Gene3D G3DSA:3.10.20.70 7 109 1.6E-42 T 25-04-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS04640 b90bf4da2f14b0205636e2e65c24736f 444 SMART SM01230 106 354 4.5E-134 T 25-04-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS04640 b90bf4da2f14b0205636e2e65c24736f 444 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 25-04-2017 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CLFO_RS04640 b90bf4da2f14b0205636e2e65c24736f 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 100 7.9E-32 T 25-04-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS04640 b90bf4da2f14b0205636e2e65c24736f 444 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 441 5.1E-169 T 25-04-2017 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS04640 b90bf4da2f14b0205636e2e65c24736f 444 SUPERFAMILY SSF55931 106 441 3.14E-121 T 25-04-2017 CLFO_RS04640 b90bf4da2f14b0205636e2e65c24736f 444 Gene3D G3DSA:3.30.590.10 110 430 4.3E-122 T 25-04-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CLFO_RS04640 b90bf4da2f14b0205636e2e65c24736f 444 SUPERFAMILY SSF54368 6 105 9.02E-34 T 25-04-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS04640 b90bf4da2f14b0205636e2e65c24736f 444 Pfam PF00120 Glutamine synthetase, catalytic domain 107 440 1.9E-132 T 25-04-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS17785 1759b11bc5a8591500ed2a822ffe6669 234 PIRSF PIRSF039137 1 234 2.0E-110 T 25-04-2017 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CLFO_RS17785 1759b11bc5a8591500ed2a822ffe6669 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS17785 1759b11bc5a8591500ed2a822ffe6669 234 SMART SM00382 26 228 1.8E-8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS17785 1759b11bc5a8591500ed2a822ffe6669 234 Gene3D G3DSA:3.40.50.300 1 228 9.6E-64 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17785 1759b11bc5a8591500ed2a822ffe6669 234 Pfam PF00005 ABC transporter 17 162 6.3E-34 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS17785 1759b11bc5a8591500ed2a822ffe6669 234 SUPERFAMILY SSF52540 2 232 1.81E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12390 1649317bf092dce08039f3071c9d6f76 246 Hamap MF_00201 DNA repair protein RecO [recO]. 1 246 28.977 T 25-04-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CLFO_RS12390 1649317bf092dce08039f3071c9d6f76 246 Gene3D G3DSA:2.40.50.140 2 82 1.1E-21 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS12390 1649317bf092dce08039f3071c9d6f76 246 Pfam PF11967 Recombination protein O N terminal 1 77 6.0E-24 T 25-04-2017 IPR022572 DNA replication/recombination mediator RecO, N-terminal CLFO_RS12390 1649317bf092dce08039f3071c9d6f76 246 SUPERFAMILY SSF57863 81 233 1.8E-37 T 25-04-2017 CLFO_RS12390 1649317bf092dce08039f3071c9d6f76 246 Pfam PF02565 Recombination protein O C terminal 82 241 4.0E-35 T 25-04-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CLFO_RS12390 1649317bf092dce08039f3071c9d6f76 246 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 244 1.4E-59 T 25-04-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CLFO_RS12390 1649317bf092dce08039f3071c9d6f76 246 SUPERFAMILY SSF50249 1 78 3.77E-19 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS16060 1ca00cd63969cb23397a75213941fb0e 225 Pfam PF13545 Crp-like helix-turn-helix domain 154 223 6.3E-15 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS16060 1ca00cd63969cb23397a75213941fb0e 225 SUPERFAMILY SSF46785 152 223 6.13E-11 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16060 1ca00cd63969cb23397a75213941fb0e 225 SMART SM00100 13 134 0.0026 T 25-04-2017 IPR000595 Cyclic nucleotide-binding domain CLFO_RS16060 1ca00cd63969cb23397a75213941fb0e 225 Pfam PF00027 Cyclic nucleotide-binding domain 35 119 2.9E-12 T 25-04-2017 IPR000595 Cyclic nucleotide-binding domain CLFO_RS16060 1ca00cd63969cb23397a75213941fb0e 225 SUPERFAMILY SSF51206 2 147 3.4E-25 T 25-04-2017 IPR018490 Cyclic nucleotide-binding-like CLFO_RS16060 1ca00cd63969cb23397a75213941fb0e 225 Gene3D G3DSA:2.60.120.10 8 149 3.0E-29 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS16060 1ca00cd63969cb23397a75213941fb0e 225 Gene3D G3DSA:1.10.10.10 152 223 9.1E-13 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS11405 9d4431b8e73f7ccf8e08377ae0d424b8 311 Gene3D G3DSA:3.10.25.10 206 309 2.0E-32 T 25-04-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLFO_RS11405 9d4431b8e73f7ccf8e08377ae0d424b8 311 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 132 155 - T 25-04-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLFO_RS11405 9d4431b8e73f7ccf8e08377ae0d424b8 311 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 37.096 T 25-04-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CLFO_RS11405 9d4431b8e73f7ccf8e08377ae0d424b8 311 Gene3D G3DSA:3.40.50.170 1 204 1.2E-73 T 25-04-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLFO_RS11405 9d4431b8e73f7ccf8e08377ae0d424b8 311 SUPERFAMILY SSF50486 204 305 1.88E-27 T 25-04-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CLFO_RS11405 9d4431b8e73f7ccf8e08377ae0d424b8 311 Pfam PF00551 Formyl transferase 1 177 3.0E-46 T 25-04-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLFO_RS11405 9d4431b8e73f7ccf8e08377ae0d424b8 311 Pfam PF02911 Formyl transferase, C-terminal domain 204 299 3.8E-27 T 25-04-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLFO_RS11405 9d4431b8e73f7ccf8e08377ae0d424b8 311 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 300 1.6E-96 T 25-04-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CLFO_RS11405 9d4431b8e73f7ccf8e08377ae0d424b8 311 SUPERFAMILY SSF53328 1 206 1.83E-69 T 25-04-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 Pfam PF03454 MoeA C-terminal region (domain IV) 339 408 3.1E-15 T 25-04-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 SMART SM00852 187 326 4.8E-34 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 Gene3D G3DSA:2.170.190.11 51 137 6.3E-24 T 25-04-2017 CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 Pfam PF00994 Probable molybdopterin binding domain 188 321 2.7E-23 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 Gene3D G3DSA:2.40.340.10 335 408 2.5E-19 T 25-04-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 Pfam PF03453 MoeA N-terminal region (domain I and II) 8 174 1.8E-30 T 25-04-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 SUPERFAMILY SSF63882 7 182 7.06E-50 T 25-04-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 Gene3D G3DSA:3.90.105.10 138 169 4.4E-21 T 25-04-2017 CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 183 320 3.5E-30 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 Gene3D G3DSA:3.40.980.10 170 334 1.8E-54 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 260 295 - T 25-04-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 SUPERFAMILY SSF63867 335 408 1.7E-13 T 25-04-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS07130 fe93898f87b1fc8b431ad433be4334e1 408 SUPERFAMILY SSF53218 184 329 2.62E-36 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS10090 02bd4b56fdd1f1a1934a08fcbfc53692 851 ProSitePatterns PS00850 Glycine radical domain signature. 822 830 - T 25-04-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CLFO_RS10090 02bd4b56fdd1f1a1934a08fcbfc53692 851 Pfam PF02901 Pyruvate formate lyase-like 15 713 4.5E-273 T 25-04-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 CLFO_RS10090 02bd4b56fdd1f1a1934a08fcbfc53692 851 Pfam PF01228 Glycine radical 730 833 1.1E-33 T 25-04-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CLFO_RS10090 02bd4b56fdd1f1a1934a08fcbfc53692 851 Gene3D G3DSA:3.20.70.20 6 597 2.3E-302 T 25-04-2017 CLFO_RS10090 02bd4b56fdd1f1a1934a08fcbfc53692 851 Gene3D G3DSA:3.20.70.20 662 850 2.3E-302 T 25-04-2017 CLFO_RS10090 02bd4b56fdd1f1a1934a08fcbfc53692 851 PIRSF PIRSF000379 25 851 3.7E-147 T 25-04-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CLFO_RS10090 02bd4b56fdd1f1a1934a08fcbfc53692 851 SUPERFAMILY SSF51998 12 593 3.05E-275 T 25-04-2017 CLFO_RS10090 02bd4b56fdd1f1a1934a08fcbfc53692 851 SUPERFAMILY SSF51998 650 851 3.05E-275 T 25-04-2017 CLFO_RS17825 a0af0ca32187d4958f59fa52f0b25305 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 268 2.1E-27 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS17825 a0af0ca32187d4958f59fa52f0b25305 283 Gene3D G3DSA:1.10.3720.10 69 272 1.7E-35 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS17825 a0af0ca32187d4958f59fa52f0b25305 283 SUPERFAMILY SSF161098 88 272 7.59E-42 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12190 becaafcff84d3e162b51510f61dbc09b 262 SMART SM00062 34 257 5.2E-51 T 25-04-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLFO_RS12190 becaafcff84d3e162b51510f61dbc09b 262 Gene3D G3DSA:3.40.190.10 216 258 4.3E-37 T 25-04-2017 CLFO_RS12190 becaafcff84d3e162b51510f61dbc09b 262 Gene3D G3DSA:3.40.190.10 33 110 4.3E-37 T 25-04-2017 CLFO_RS12190 becaafcff84d3e162b51510f61dbc09b 262 Gene3D G3DSA:3.40.190.10 111 212 6.3E-20 T 25-04-2017 CLFO_RS12190 becaafcff84d3e162b51510f61dbc09b 262 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 56 69 - T 25-04-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CLFO_RS12190 becaafcff84d3e162b51510f61dbc09b 262 SUPERFAMILY SSF53850 5 256 3.67E-53 T 25-04-2017 CLFO_RS12190 becaafcff84d3e162b51510f61dbc09b 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 255 2.1E-49 T 25-04-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLFO_RS01700 ce211437899fb5cc626eb3f17594fc9f 96 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 81 2.8E-20 T 25-04-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLFO_RS01700 ce211437899fb5cc626eb3f17594fc9f 96 Gene3D G3DSA:3.40.1690.10 7 85 6.6E-25 T 25-04-2017 IPR029025 Type III secretion system substrate exporter, C-terminal CLFO_RS01700 ce211437899fb5cc626eb3f17594fc9f 96 SUPERFAMILY SSF160544 4 85 3.4E-23 T 25-04-2017 IPR029025 Type III secretion system substrate exporter, C-terminal CLFO_RS09375 57af6b578f308f4484810f00ceee6ea8 220 Gene3D G3DSA:2.40.440.10 162 218 4.1E-13 T 25-04-2017 CLFO_RS09375 57af6b578f308f4484810f00ceee6ea8 220 Gene3D G3DSA:2.40.440.10 68 123 4.1E-13 T 25-04-2017 CLFO_RS09375 57af6b578f308f4484810f00ceee6ea8 220 SUPERFAMILY SSF141523 177 219 1.11E-14 T 25-04-2017 CLFO_RS09375 57af6b578f308f4484810f00ceee6ea8 220 SUPERFAMILY SSF141523 70 139 1.11E-14 T 25-04-2017 CLFO_RS09375 57af6b578f308f4484810f00ceee6ea8 220 Pfam PF03734 L,D-transpeptidase catalytic domain 77 218 3.1E-16 T 25-04-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CLFO_RS11455 1f69e798aaa82d42bc004cd2ddb84a4f 178 Pfam PF00156 Phosphoribosyl transferase domain 9 155 5.6E-27 T 25-04-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLFO_RS11455 1f69e798aaa82d42bc004cd2ddb84a4f 178 SUPERFAMILY SSF53271 7 172 2.49E-47 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS11455 1f69e798aaa82d42bc004cd2ddb84a4f 178 Gene3D G3DSA:3.40.50.2020 7 167 1.7E-54 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS11455 1f69e798aaa82d42bc004cd2ddb84a4f 178 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 177 38.57 T 25-04-2017 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CLFO_RS13120 697b84dcb77c61c57ead6f6cc828e9cb 498 Pfam PF00005 ABC transporter 22 172 2.6E-25 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS13120 697b84dcb77c61c57ead6f6cc828e9cb 498 Pfam PF00005 ABC transporter 272 425 1.4E-23 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS13120 697b84dcb77c61c57ead6f6cc828e9cb 498 SUPERFAMILY SSF52540 260 485 2.38E-46 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13120 697b84dcb77c61c57ead6f6cc828e9cb 498 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS13120 697b84dcb77c61c57ead6f6cc828e9cb 498 SUPERFAMILY SSF52540 6 228 3.75E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13120 697b84dcb77c61c57ead6f6cc828e9cb 498 SMART SM00382 280 481 3.9E-6 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS13120 697b84dcb77c61c57ead6f6cc828e9cb 498 SMART SM00382 31 220 7.3E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS13120 697b84dcb77c61c57ead6f6cc828e9cb 498 Gene3D G3DSA:3.40.50.300 256 489 5.7E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13120 697b84dcb77c61c57ead6f6cc828e9cb 498 Gene3D G3DSA:3.40.50.300 3 229 7.6E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 SUPERFAMILY SSF140490 436 538 1.57E-40 T 25-04-2017 CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 580 591 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 453 464 - T 25-04-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 SUPERFAMILY SSF54862 528 596 1.15E-14 T 25-04-2017 CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 Gene3D G3DSA:3.40.30.10 5 99 1.7E-33 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 SMART SM00928 440 485 7.9E-26 T 25-04-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 549 560 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 159 330 2.9E-49 T 25-04-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 SUPERFAMILY SSF142984 352 435 2.62E-25 T 25-04-2017 CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 441 525 5.1E-35 T 25-04-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 SUPERFAMILY SSF52833 5 95 1.68E-24 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 SUPERFAMILY SSF142019 111 351 7.19E-97 T 25-04-2017 CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 Pfam PF00037 4Fe-4S binding domain 574 595 4.6E-9 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 Pfam PF10531 SLBB domain 356 402 1.7E-7 T 25-04-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 Gene3D G3DSA:3.30.70.20 546 595 6.0E-14 T 25-04-2017 CLFO_RS17630 4ca2306cfbe2e2be3efe7cd1d4214757 598 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 6 80 5.7E-8 T 25-04-2017 CLFO_RS10245 76aa31a37e147247a2af2ae53afc97d8 428 TIGRFAM TIGR04386 ThiC_like_1: ThiC-like protein 1 3 427 3.8E-228 T 25-04-2017 CLFO_RS10245 76aa31a37e147247a2af2ae53afc97d8 428 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 1 422 3.7E-162 T 25-04-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CLFO_RS10245 76aa31a37e147247a2af2ae53afc97d8 428 Pfam PF01964 Radical SAM ThiC family 3 422 2.4E-174 T 25-04-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 569 630 8.1E-33 T 25-04-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 SUPERFAMILY SSF56719 401 634 3.92E-93 T 25-04-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 25-04-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 9 641 95.732 T 25-04-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR01159 DNA gyrase subunit B signature 227 249 1.4E-78 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR01159 DNA gyrase subunit B signature 477 486 1.4E-78 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR01159 DNA gyrase subunit B signature 186 201 1.4E-78 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR01159 DNA gyrase subunit B signature 201 214 1.4E-78 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR01159 DNA gyrase subunit B signature 594 606 1.4E-78 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR01159 DNA gyrase subunit B signature 12 22 1.4E-78 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR01159 DNA gyrase subunit B signature 319 335 1.4E-78 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR01159 DNA gyrase subunit B signature 367 381 1.4E-78 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR01159 DNA gyrase subunit B signature 381 401 1.4E-78 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR01159 DNA gyrase subunit B signature 610 626 1.4E-78 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 SMART SM00433 41 634 0.0 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 12 641 0.0 T 25-04-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 SMART SM00387 37 181 2.1E-24 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 SUPERFAMILY SSF55874 11 219 1.23E-73 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 Gene3D G3DSA:3.30.565.10 12 221 2.4E-91 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 SUPERFAMILY SSF54211 228 398 2.47E-61 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 Gene3D G3DSA:3.40.50.670 411 623 2.4E-100 T 25-04-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 Pfam PF01751 Toprim domain 426 526 1.2E-16 T 25-04-2017 IPR006171 Toprim domain CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 180 3.6E-23 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 Pfam PF00204 DNA gyrase B 228 397 1.1E-63 T 25-04-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR00418 DNA topoisomerase II family signature 41 56 1.5E-73 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR00418 DNA topoisomerase II family signature 275 288 1.5E-73 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR00418 DNA topoisomerase II family signature 573 589 1.5E-73 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR00418 DNA topoisomerase II family signature 119 133 1.5E-73 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR00418 DNA topoisomerase II family signature 493 509 1.5E-73 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR00418 DNA topoisomerase II family signature 531 543 1.5E-73 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR00418 DNA topoisomerase II family signature 427 441 1.5E-73 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR00418 DNA topoisomerase II family signature 76 89 1.5E-73 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 PRINTS PR00418 DNA topoisomerase II family signature 511 528 1.5E-73 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00030 9e001daa19040a0da9b202a586f458fe 641 Gene3D G3DSA:3.30.230.10 227 399 7.7E-76 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS11130 31f56187785974cd7bb7320456fada5e 264 Pfam PF02108 Flagellar assembly protein FliH 117 245 5.7E-18 T 25-04-2017 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CLFO_RS11130 31f56187785974cd7bb7320456fada5e 264 Gene3D G3DSA:1.20.5.620 67 102 1.7E-4 T 25-04-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLFO_RS05230 3e9df002f97a43adc7ae401d096366fe 372 Gene3D G3DSA:2.40.50.100 62 95 2.3E-11 T 25-04-2017 CLFO_RS05230 3e9df002f97a43adc7ae401d096366fe 372 Gene3D G3DSA:2.40.50.100 180 212 2.3E-11 T 25-04-2017 CLFO_RS05230 3e9df002f97a43adc7ae401d096366fe 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 358 6.4E-44 T 25-04-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CLFO_RS05230 3e9df002f97a43adc7ae401d096366fe 372 SUPERFAMILY SSF111369 57 131 5.49E-12 T 25-04-2017 CLFO_RS05230 3e9df002f97a43adc7ae401d096366fe 372 SUPERFAMILY SSF111369 159 288 5.49E-12 T 25-04-2017 CLFO_RS05230 3e9df002f97a43adc7ae401d096366fe 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 282 5.5E-11 T 25-04-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLFO_RS13935 f561eb7f043df7607b40bf98cd92b509 452 Gene3D G3DSA:3.40.250.10 34 168 1.9E-20 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS13935 f561eb7f043df7607b40bf98cd92b509 452 SUPERFAMILY SSF52821 312 439 6.16E-24 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS13935 f561eb7f043df7607b40bf98cd92b509 452 SUPERFAMILY SSF52821 171 345 1.09E-27 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS13935 f561eb7f043df7607b40bf98cd92b509 452 SMART SM00450 317 440 2.5E-12 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS13935 f561eb7f043df7607b40bf98cd92b509 452 SMART SM00450 173 291 8.2E-20 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS13935 f561eb7f043df7607b40bf98cd92b509 452 SMART SM00450 46 161 5.9E-11 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS13935 f561eb7f043df7607b40bf98cd92b509 452 Gene3D G3DSA:3.40.250.10 169 305 8.2E-35 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS13935 f561eb7f043df7607b40bf98cd92b509 452 Pfam PF00581 Rhodanese-like domain 180 287 7.4E-18 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS13935 f561eb7f043df7607b40bf98cd92b509 452 Pfam PF00581 Rhodanese-like domain 322 436 1.0E-9 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS13935 f561eb7f043df7607b40bf98cd92b509 452 Pfam PF00581 Rhodanese-like domain 47 151 2.3E-9 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS13935 f561eb7f043df7607b40bf98cd92b509 452 SUPERFAMILY SSF52821 43 165 5.24E-19 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS13935 f561eb7f043df7607b40bf98cd92b509 452 Gene3D G3DSA:3.40.250.10 312 440 2.4E-24 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS12135 a9d79f01be5ad87875578ae90768416d 261 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1 72 1.6E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS12135 a9d79f01be5ad87875578ae90768416d 261 Gene3D G3DSA:1.10.287.130 1 59 1.5E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS12135 a9d79f01be5ad87875578ae90768416d 261 PRINTS PR00344 Bacterial sensor protein C-terminal signature 191 209 8.8E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS12135 a9d79f01be5ad87875578ae90768416d 261 PRINTS PR00344 Bacterial sensor protein C-terminal signature 156 170 8.8E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS12135 a9d79f01be5ad87875578ae90768416d 261 PRINTS PR00344 Bacterial sensor protein C-terminal signature 215 228 8.8E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS12135 a9d79f01be5ad87875578ae90768416d 261 Gene3D G3DSA:3.30.565.10 60 229 1.3E-46 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS12135 a9d79f01be5ad87875578ae90768416d 261 SUPERFAMILY SSF55874 62 232 1.2E-44 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS12135 a9d79f01be5ad87875578ae90768416d 261 SMART SM00388 1 73 3.1E-12 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS12135 a9d79f01be5ad87875578ae90768416d 261 SUPERFAMILY SSF47384 1 72 3.14E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS12135 a9d79f01be5ad87875578ae90768416d 261 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 120 229 6.9E-28 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS12135 a9d79f01be5ad87875578ae90768416d 261 SMART SM00387 119 231 8.8E-35 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 237 364 6.2E-14 T 25-04-2017 IPR000014 PAS domain CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 SUPERFAMILY SSF55874 434 604 9.95E-47 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 SUPERFAMILY SSF55785 244 359 1.22E-18 T 25-04-2017 IPR000014 PAS domain CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 SMART SM00091 238 306 1.9E-4 T 25-04-2017 IPR000014 PAS domain CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 SMART SM00388 373 445 3.6E-11 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 492 601 5.6E-26 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 Gene3D G3DSA:3.30.450.20 239 379 7.8E-22 T 25-04-2017 CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 Pfam PF08447 PAS fold 261 350 1.9E-12 T 25-04-2017 IPR013655 PAS fold-3 GO:0005515 CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 445 1.8E-12 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 Gene3D G3DSA:3.30.565.10 432 602 2.5E-50 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 SMART SM00387 491 603 6.5E-39 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 17 179 1.4E-28 T 25-04-2017 IPR025847 MEDS domain CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 Gene3D G3DSA:1.10.287.130 380 431 2.6E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 SMART SM00086 313 357 0.0094 T 25-04-2017 IPR001610 PAC motif CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 SUPERFAMILY SSF47384 362 445 5.3E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 581 7.8E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 7.8E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 600 7.8E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS09445 ec49d2334d857665d6c9aae55ba7b8e8 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 7.8E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 275 289 - T 25-04-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.9E-5 T 25-04-2017 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 2.9E-5 T 25-04-2017 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 163 4.2E-6 T 25-04-2017 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 4.2E-6 T 25-04-2017 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 8 625 41.791 T 25-04-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 SMART SM01228 547 618 3.2E-42 T 25-04-2017 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 Pfam PF01134 Glucose inhibited division protein A 11 400 4.3E-162 T 25-04-2017 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 Gene3D G3DSA:3.50.50.60 10 225 1.4E-33 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 10 623 2.2E-270 T 25-04-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 SUPERFAMILY SSF51905 100 263 1.96E-41 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 SUPERFAMILY SSF51905 9 69 1.96E-41 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 Pfam PF13932 GidA associated domain 403 617 9.1E-75 T 25-04-2017 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CLFO_RS21410 74fe1f33a3a73efcd1ac12a2d6b9d84b 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 370 393 - T 25-04-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CLFO_RS20695 1510f048b4e59f008358658608ba1eba 389 Gene3D G3DSA:1.20.1090.10 185 388 5.0E-62 T 25-04-2017 CLFO_RS20695 1510f048b4e59f008358658608ba1eba 389 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 381 4.7E-109 T 25-04-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLFO_RS20695 1510f048b4e59f008358658608ba1eba 389 SUPERFAMILY SSF56796 1 386 5.76E-117 T 25-04-2017 CLFO_RS20695 1510f048b4e59f008358658608ba1eba 389 Gene3D G3DSA:3.40.50.1970 1 184 1.5E-62 T 25-04-2017 CLFO_RS20695 1510f048b4e59f008358658608ba1eba 389 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 25-04-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 Gene3D G3DSA:1.10.1200.10 561 638 4.9E-14 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 Gene3D G3DSA:1.10.1200.10 668 740 3.4E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 Gene3D G3DSA:3.40.50.980 202 361 5.0E-50 T 25-04-2017 CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 Pfam PF00501 AMP-binding enzyme 54 451 4.9E-105 T 25-04-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 25-04-2017 IPR020845 AMP-binding, conserved site CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 Gene3D G3DSA:3.40.50.980 46 201 1.3E-56 T 25-04-2017 CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 SUPERFAMILY SSF47336 563 638 1.18E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 74 475 1.4E-138 T 25-04-2017 IPR010071 Amino acid adenylation domain CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 Pfam PF00550 Phosphopantetheine attachment site 569 632 1.2E-12 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 Pfam PF00550 Phosphopantetheine attachment site 671 734 1.2E-12 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 SMART SM00823 Phosphopantetheine attachment site 567 636 0.014 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 SMART SM00823 Phosphopantetheine attachment site 669 738 0.014 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 SUPERFAMILY SSF47336 668 740 2.09E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 SUPERFAMILY SSF56801 23 549 6.02E-157 T 25-04-2017 CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 Gene3D G3DSA:3.30.300.30 445 545 2.6E-34 T 25-04-2017 CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 Pfam PF13193 AMP-binding enzyme C-terminal domain 459 533 2.4E-11 T 25-04-2017 IPR025110 AMP-binding enzyme C-terminal domain CLFO_RS04775 37a63941482ae8b418a85a17ccf71890 909 Gene3D G3DSA:2.30.38.10 362 441 4.0E-28 T 25-04-2017 CLFO_RS13075 0010e241ef87f4f575d7926033b21e88 300 Pfam PF13353 4Fe-4S single cluster domain 29 111 2.7E-5 T 25-04-2017 CLFO_RS13075 0010e241ef87f4f575d7926033b21e88 300 Pfam PF04055 Radical SAM superfamily 30 176 2.9E-11 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS13075 0010e241ef87f4f575d7926033b21e88 300 SUPERFAMILY SSF102114 24 272 4.84E-32 T 25-04-2017 CLFO_RS13075 0010e241ef87f4f575d7926033b21e88 300 Gene3D G3DSA:3.20.20.70 21 272 1.2E-31 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS13075 0010e241ef87f4f575d7926033b21e88 300 SMART SM00729 25 216 0.0015 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 501 52.695 T 25-04-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 SUPERFAMILY SSF47917 372 500 4.45E-48 T 25-04-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 Gene3D G3DSA:3.40.50.300 94 371 3.8E-121 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 Gene3D G3DSA:1.20.150.20 372 500 4.6E-54 T 25-04-2017 CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 25-04-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 SUPERFAMILY SSF50615 10 94 6.28E-30 T 25-04-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 Gene3D G3DSA:2.40.30.20 1 93 7.9E-39 T 25-04-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 496 1.5E-50 T 25-04-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 PIRSF PIRSF039088 1 503 4.9E-271 T 25-04-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 91 3.5E-17 T 25-04-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 501 3.5E-261 T 25-04-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 8.1E-75 T 25-04-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS01020 52081d146c388814808fe69faa8b65e1 503 SUPERFAMILY SSF52540 96 370 8.77E-102 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08370 3599acd631b00e68b3c550cee97edadb 385 SUPERFAMILY SSF54001 257 385 7.85E-37 T 25-04-2017 CLFO_RS08370 3599acd631b00e68b3c550cee97edadb 385 SMART SM00287 112 175 1.1E-8 T 25-04-2017 IPR003646 SH3-like domain, bacterial-type CLFO_RS08370 3599acd631b00e68b3c550cee97edadb 385 SMART SM00287 43 106 0.84 T 25-04-2017 IPR003646 SH3-like domain, bacterial-type CLFO_RS08370 3599acd631b00e68b3c550cee97edadb 385 SMART SM00287 179 236 1.6 T 25-04-2017 IPR003646 SH3-like domain, bacterial-type CLFO_RS08370 3599acd631b00e68b3c550cee97edadb 385 Gene3D G3DSA:3.90.1720.10 253 385 3.1E-41 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS08370 3599acd631b00e68b3c550cee97edadb 385 Pfam PF08239 Bacterial SH3 domain 121 173 2.1E-13 T 25-04-2017 IPR003646 SH3-like domain, bacterial-type CLFO_RS08370 3599acd631b00e68b3c550cee97edadb 385 Pfam PF08239 Bacterial SH3 domain 54 103 2.4E-7 T 25-04-2017 IPR003646 SH3-like domain, bacterial-type CLFO_RS08370 3599acd631b00e68b3c550cee97edadb 385 Gene3D G3DSA:2.30.30.40 139 185 1.4E-4 T 25-04-2017 CLFO_RS08370 3599acd631b00e68b3c550cee97edadb 385 Pfam PF00877 NlpC/P60 family 269 383 6.5E-26 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS04475 4afb957032f02a2e64fbbff4984fc80f 201 Pfam PF13489 Methyltransferase domain 28 158 1.6E-16 T 25-04-2017 CLFO_RS04475 4afb957032f02a2e64fbbff4984fc80f 201 Gene3D G3DSA:3.40.50.150 21 169 1.4E-29 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS04475 4afb957032f02a2e64fbbff4984fc80f 201 SUPERFAMILY SSF53335 21 175 1.51E-27 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 SUPERFAMILY SSF160443 715 791 6.54E-8 T 25-04-2017 IPR002625 Smr domain CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 SUPERFAMILY SSF52540 293 513 5.12E-45 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 PIRSF PIRSF005814 1 791 8.7E-262 T 25-04-2017 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 SMART SM00533 9 315 2.0E-25 T 25-04-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 SMART SM00463 713 791 8.2E-14 T 25-04-2017 IPR002625 Smr domain CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 Gene3D G3DSA:3.40.50.300 293 514 2.6E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 SMART SM00534 328 513 1.2E-78 T 25-04-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 410 426 - T 25-04-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 Pfam PF00488 MutS domain V 331 513 1.2E-38 T 25-04-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 SUPERFAMILY SSF48334 17 288 2.49E-25 T 25-04-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 790 21.388 T 25-04-2017 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 Pfam PF01713 Smr domain 716 791 1.4E-16 T 25-04-2017 IPR002625 Smr domain CLFO_RS05765 6fb3b70755ef50aa5e8a9e91a06d79d5 791 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 791 4.6E-225 T 25-04-2017 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 609 6.8E-33 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 958 1067 6.5E-10 T 25-04-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 SMART SM00890 620 679 2.2E-31 T 25-04-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 SUPERFAMILY SSF52518 3 258 2.44E-80 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 Gene3D G3DSA:4.10.780.10 632 668 9.1E-19 T 25-04-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 PIRSF PIRSF000159 1 1168 0.0 T 25-04-2017 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 Pfam PF12838 4Fe-4S dicluster domain 689 758 1.2E-9 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 Gene3D G3DSA:3.30.70.20 672 781 6.5E-22 T 25-04-2017 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 Gene3D G3DSA:3.40.920.10 416 621 6.3E-91 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 SUPERFAMILY SSF53323 415 668 3.01E-91 T 25-04-2017 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 372 2.8E-15 T 25-04-2017 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 SUPERFAMILY SSF52518 789 1166 3.07E-138 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 Gene3D G3DSA:3.40.50.970 791 1167 1.5E-155 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 Pfam PF10371 Domain of unknown function 629 678 9.0E-25 T 25-04-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 SUPERFAMILY SSF54862 665 832 1.33E-22 T 25-04-2017 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 SUPERFAMILY SSF52922 259 411 1.86E-49 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 Gene3D G3DSA:3.40.50.970 3 258 4.6E-115 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 18 248 3.7E-81 T 25-04-2017 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1167 0.0 T 25-04-2017 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLFO_RS20415 3f1efc39b4ef251b22c276a6e868c3cd 1168 Gene3D G3DSA:3.40.50.920 259 412 2.0E-64 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS19650 cdc1aa2584d8050f8160f43076e3e291 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 96 22.283 T 25-04-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19650 cdc1aa2584d8050f8160f43076e3e291 103 SMART SM00739 2 29 3.3E-6 T 25-04-2017 IPR005824 KOW CLFO_RS19650 cdc1aa2584d8050f8160f43076e3e291 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 1.8E-27 T 25-04-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19650 cdc1aa2584d8050f8160f43076e3e291 103 Pfam PF00467 KOW motif 5 36 2.3E-8 T 25-04-2017 IPR005824 KOW CLFO_RS19650 cdc1aa2584d8050f8160f43076e3e291 103 SUPERFAMILY SSF50104 1 101 3.13E-36 T 25-04-2017 IPR008991 Translation protein SH3-like domain CLFO_RS19650 cdc1aa2584d8050f8160f43076e3e291 103 Gene3D G3DSA:2.30.30.30 1 90 2.1E-26 T 25-04-2017 IPR014722 Ribosomal protein L2 domain 2 CLFO_RS19650 cdc1aa2584d8050f8160f43076e3e291 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 8.5E-40 T 25-04-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS09845 c07dd6d8d5b8adf8145df4665bea371b 388 Gene3D G3DSA:2.60.410.10 281 370 2.6E-21 T 25-04-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLFO_RS09845 c07dd6d8d5b8adf8145df4665bea371b 388 SUPERFAMILY SSF56601 6 281 3.72E-83 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS09845 c07dd6d8d5b8adf8145df4665bea371b 388 Gene3D G3DSA:3.40.710.10 13 279 5.5E-97 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS09845 c07dd6d8d5b8adf8145df4665bea371b 388 SUPERFAMILY SSF69189 273 369 2.55E-19 T 25-04-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLFO_RS09845 c07dd6d8d5b8adf8145df4665bea371b 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 281 370 2.9E-19 T 25-04-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLFO_RS09845 c07dd6d8d5b8adf8145df4665bea371b 388 SMART SM00936 281 371 3.3E-21 T 25-04-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLFO_RS09845 c07dd6d8d5b8adf8145df4665bea371b 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 26 261 1.8E-72 T 25-04-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CLFO_RS09845 c07dd6d8d5b8adf8145df4665bea371b 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 2.2E-15 T 25-04-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLFO_RS09845 c07dd6d8d5b8adf8145df4665bea371b 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 2.2E-15 T 25-04-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLFO_RS09845 c07dd6d8d5b8adf8145df4665bea371b 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 2.2E-15 T 25-04-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLFO_RS06450 11bd169f9d3205b9fb13c7fc46a41b61 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.4E-20 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS06450 11bd169f9d3205b9fb13c7fc46a41b61 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.8E-10 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS06450 11bd169f9d3205b9fb13c7fc46a41b61 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.8E-10 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS06450 11bd169f9d3205b9fb13c7fc46a41b61 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.8E-10 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS06450 11bd169f9d3205b9fb13c7fc46a41b61 291 Gene3D G3DSA:1.10.10.10 1 86 4.5E-28 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06450 11bd169f9d3205b9fb13c7fc46a41b61 291 SUPERFAMILY SSF53850 90 288 2.41E-40 T 25-04-2017 CLFO_RS06450 11bd169f9d3205b9fb13c7fc46a41b61 291 Gene3D G3DSA:3.40.190.10 175 258 7.4E-22 T 25-04-2017 CLFO_RS06450 11bd169f9d3205b9fb13c7fc46a41b61 291 Pfam PF03466 LysR substrate binding domain 87 287 3.3E-46 T 25-04-2017 IPR005119 LysR, substrate-binding CLFO_RS06450 11bd169f9d3205b9fb13c7fc46a41b61 291 SUPERFAMILY SSF46785 1 109 1.03E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06450 11bd169f9d3205b9fb13c7fc46a41b61 291 Gene3D G3DSA:3.40.190.10 90 174 1.1E-13 T 25-04-2017 CLFO_RS15845 daf34cd4f9b823ffd268ee2bd532b451 590 SUPERFAMILY SSF90123 19 329 1.57E-52 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS15845 daf34cd4f9b823ffd268ee2bd532b451 590 Gene3D G3DSA:3.40.50.300 348 578 4.5E-78 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15845 daf34cd4f9b823ffd268ee2bd532b451 590 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15845 daf34cd4f9b823ffd268ee2bd532b451 590 SMART SM00382 374 560 1.8E-16 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15845 daf34cd4f9b823ffd268ee2bd532b451 590 Pfam PF00005 ABC transporter 365 513 5.1E-30 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15845 daf34cd4f9b823ffd268ee2bd532b451 590 Pfam PF00664 ABC transporter transmembrane region 31 294 4.5E-25 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS15845 daf34cd4f9b823ffd268ee2bd532b451 590 SUPERFAMILY SSF52540 345 584 2.47E-89 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15845 daf34cd4f9b823ffd268ee2bd532b451 590 Gene3D G3DSA:1.20.1560.10 19 329 1.9E-45 T 25-04-2017 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 Gene3D G3DSA:1.20.120.330 567 634 2.1E-6 T 25-04-2017 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 Gene3D G3DSA:3.30.110.40 678 763 3.2E-14 T 25-04-2017 IPR001455 TusA-like domain CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 SUPERFAMILY SSF64307 689 763 1.83E-12 T 25-04-2017 IPR001455 TusA-like domain CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 SUPERFAMILY SSF56014 376 499 1.44E-21 T 25-04-2017 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 SUPERFAMILY SSF56014 118 276 5.5E-38 T 25-04-2017 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 Pfam PF01206 Sulfurtransferase TusA 694 762 1.7E-12 T 25-04-2017 IPR001455 TusA-like domain CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 42 109 5.1E-20 T 25-04-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 304 367 1.2E-7 T 25-04-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 423 439 - T 25-04-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 Gene3D G3DSA:3.90.480.10 46 115 7.2E-29 T 25-04-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 Gene3D G3DSA:3.90.480.10 296 368 7.2E-29 T 25-04-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 Gene3D G3DSA:3.30.413.10 118 273 3.9E-32 T 25-04-2017 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 118 270 4.5E-29 T 25-04-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 380 463 1.3 T 25-04-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 Gene3D G3DSA:3.30.413.10 377 498 3.7E-17 T 25-04-2017 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 SUPERFAMILY SSF55124 14 117 2.29E-26 T 25-04-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS06500 1b4008a5eec4d776b4f2561c303ff66b 764 SUPERFAMILY SSF55124 222 367 2.62E-9 T 25-04-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS12725 530ed52861bf155f3035895c382f2365 104 SMART SM00418 11 87 6.7E-26 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS12725 530ed52861bf155f3035895c382f2365 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 7.6E-20 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS12725 530ed52861bf155f3035895c382f2365 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 33 44 7.6E-20 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS12725 530ed52861bf155f3035895c382f2365 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 7.6E-20 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS12725 530ed52861bf155f3035895c382f2365 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 46 61 7.6E-20 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS12725 530ed52861bf155f3035895c382f2365 104 SUPERFAMILY SSF46785 3 85 6.42E-26 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12725 530ed52861bf155f3035895c382f2365 104 Gene3D G3DSA:1.10.10.10 2 94 7.4E-32 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12725 530ed52861bf155f3035895c382f2365 104 Pfam PF01022 Bacterial regulatory protein, arsR family 18 65 1.7E-18 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 2 185 2.2E-79 T 25-04-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.1E-13 T 25-04-2017 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 2.1E-13 T 25-04-2017 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.1E-13 T 25-04-2017 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 SUPERFAMILY SSF52317 2 189 1.54E-57 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS05095 c1846d8727487da2c676a25014975304 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.6E-6 T 25-04-2017 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.6E-6 T 25-04-2017 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 Gene3D G3DSA:3.40.50.880 2 189 2.4E-68 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS05095 c1846d8727487da2c676a25014975304 197 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.6E-34 T 25-04-2017 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.6E-34 T 25-04-2017 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 PRINTS PR00097 Anthranilate synthase component II signature 164 177 4.6E-34 T 25-04-2017 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.6E-34 T 25-04-2017 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.6E-34 T 25-04-2017 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.6E-34 T 25-04-2017 CLFO_RS05095 c1846d8727487da2c676a25014975304 197 Pfam PF00117 Glutamine amidotransferase class-I 4 187 5.8E-56 T 25-04-2017 IPR017926 Glutamine amidotransferase CLFO_RS00550 cd9864133cbe94b49ae4dd2ebde5d984 186 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 25-04-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CLFO_RS00550 cd9864133cbe94b49ae4dd2ebde5d984 186 SUPERFAMILY SSF53178 1 184 4.97E-66 T 25-04-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLFO_RS00550 cd9864133cbe94b49ae4dd2ebde5d984 186 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 35.354 T 25-04-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLFO_RS00550 cd9864133cbe94b49ae4dd2ebde5d984 186 Gene3D G3DSA:3.40.50.1470 1 185 1.1E-72 T 25-04-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLFO_RS00550 cd9864133cbe94b49ae4dd2ebde5d984 186 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 184 1.7E-62 T 25-04-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLFO_RS00550 cd9864133cbe94b49ae4dd2ebde5d984 186 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 25-04-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CLFO_RS00550 cd9864133cbe94b49ae4dd2ebde5d984 186 Pfam PF01195 Peptidyl-tRNA hydrolase 3 183 2.4E-60 T 25-04-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CLFO_RS11360 725f30f98f371b305d591a9b11fec103 210 Gene3D G3DSA:3.40.50.10240 1 130 2.6E-32 T 25-04-2017 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLFO_RS11360 725f30f98f371b305d591a9b11fec103 210 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 3 206 2.1E-56 T 25-04-2017 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLFO_RS11360 725f30f98f371b305d591a9b11fec103 210 SUPERFAMILY SSF63862 145 208 1.7E-12 T 25-04-2017 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLFO_RS11360 725f30f98f371b305d591a9b11fec103 210 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 23 124 4.3E-25 T 25-04-2017 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLFO_RS11360 725f30f98f371b305d591a9b11fec103 210 Gene3D G3DSA:2.60.120.320 131 208 8.5E-13 T 25-04-2017 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLFO_RS11360 725f30f98f371b305d591a9b11fec103 210 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 146 203 1.1E-15 T 25-04-2017 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLFO_RS11360 725f30f98f371b305d591a9b11fec103 210 SMART SM00983 145 204 9.5E-20 T 25-04-2017 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLFO_RS11360 725f30f98f371b305d591a9b11fec103 210 SUPERFAMILY SSF63999 3 128 4.58E-32 T 25-04-2017 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLFO_RS00970 3162916ea4d5b4ade526e7af042e8b2c 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 77 112 - T 25-04-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLFO_RS00970 3162916ea4d5b4ade526e7af042e8b2c 151 Gene3D G3DSA:3.40.140.10 4 149 9.1E-51 T 25-04-2017 CLFO_RS00970 3162916ea4d5b4ade526e7af042e8b2c 151 SUPERFAMILY SSF53927 6 146 6.63E-43 T 25-04-2017 IPR016193 Cytidine deaminase-like GO:0003824 CLFO_RS00970 3162916ea4d5b4ade526e7af042e8b2c 151 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 122 2.9E-29 T 25-04-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CLFO_RS00970 3162916ea4d5b4ade526e7af042e8b2c 151 PIRSF PIRSF006019 1 151 8.6E-58 T 25-04-2017 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-500753 CLFO_RS09080 7ff804f4c40b23865baae40aec5307c5 736 SUPERFAMILY SSF52242 596 730 6.59E-32 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS09080 7ff804f4c40b23865baae40aec5307c5 736 Pfam PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase 504 579 1.3E-29 T 25-04-2017 IPR028991 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal GO:0046983 CLFO_RS09080 7ff804f4c40b23865baae40aec5307c5 736 Gene3D G3DSA:3.20.20.440 2 448 4.5E-203 T 25-04-2017 IPR015130 D-Lysine 5,6-aminomutase alpha subunit CLFO_RS09080 7ff804f4c40b23865baae40aec5307c5 736 Pfam PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit 65 442 7.4E-45 T 25-04-2017 IPR015130 D-Lysine 5,6-aminomutase alpha subunit CLFO_RS09080 7ff804f4c40b23865baae40aec5307c5 736 Gene3D G3DSA:3.40.50.280 590 732 3.6E-38 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS09080 7ff804f4c40b23865baae40aec5307c5 736 Pfam PF02310 B12 binding domain 599 719 9.7E-14 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS09080 7ff804f4c40b23865baae40aec5307c5 736 SUPERFAMILY SSF51703 2 448 6.28E-169 T 25-04-2017 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 SUPERFAMILY SSF51735 183 417 5.96E-81 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 215 235 9.8E-34 T 25-04-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 93 107 9.8E-34 T 25-04-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 195 9.8E-34 T 25-04-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 343 354 9.8E-34 T 25-04-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 183 415 1.5E-78 T 25-04-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 Gene3D G3DSA:3.40.192.10 38 180 7.1E-56 T 25-04-2017 CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 PIRSF PIRSF000185 3 417 7.9E-169 T 25-04-2017 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 Gene3D G3DSA:3.40.50.720 183 416 2.6E-86 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 SMART SM00839 184 415 1.3E-110 T 25-04-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 36 163 9.9E-54 T 25-04-2017 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 SUPERFAMILY SSF53223 6 184 3.52E-67 T 25-04-2017 CLFO_RS01890 a65613a4662b1e469fe004e9f595fe36 417 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 101 114 - T 25-04-2017 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 CLFO_RS07985 5759d65899835e74c96888fd3ff2d693 859 SUPERFAMILY SSF53955 68 310 7.87E-68 T 25-04-2017 IPR023346 Lysozyme-like domain CLFO_RS07985 5759d65899835e74c96888fd3ff2d693 859 Pfam PF00912 Transglycosylase 79 251 4.4E-61 T 25-04-2017 IPR001264 Glycosyl transferase, family 51 CLFO_RS07985 5759d65899835e74c96888fd3ff2d693 859 Gene3D G3DSA:1.10.3810.10 86 282 5.4E-67 T 25-04-2017 CLFO_RS07985 5759d65899835e74c96888fd3ff2d693 859 Gene3D G3DSA:3.40.710.10 283 753 4.2E-118 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS07985 5759d65899835e74c96888fd3ff2d693 859 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 91 693 8.2E-162 T 25-04-2017 CLFO_RS07985 5759d65899835e74c96888fd3ff2d693 859 Pfam PF00905 Penicillin binding protein transpeptidase domain 392 689 7.5E-35 T 25-04-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLFO_RS07985 5759d65899835e74c96888fd3ff2d693 859 SUPERFAMILY SSF56601 265 282 2.92E-106 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS07985 5759d65899835e74c96888fd3ff2d693 859 SUPERFAMILY SSF56601 313 764 2.92E-106 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS02040 365b8954b81736e2a57a652dc6a03cf5 509 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 509 43.371 T 25-04-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS02040 365b8954b81736e2a57a652dc6a03cf5 509 SMART SM00851 14 129 3.2E-58 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS02040 365b8954b81736e2a57a652dc6a03cf5 509 Pfam PF02142 MGS-like domain 14 129 5.0E-28 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS02040 365b8954b81736e2a57a652dc6a03cf5 509 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 442 7.8E-114 T 25-04-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS02040 365b8954b81736e2a57a652dc6a03cf5 509 Gene3D G3DSA:3.40.140.20 362 499 4.0E-50 T 25-04-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS02040 365b8954b81736e2a57a652dc6a03cf5 509 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 509 6.6E-207 T 25-04-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS02040 365b8954b81736e2a57a652dc6a03cf5 509 SUPERFAMILY SSF52335 2 192 1.2E-71 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS02040 365b8954b81736e2a57a652dc6a03cf5 509 SMART SM00798 134 444 1.6E-173 T 25-04-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS02040 365b8954b81736e2a57a652dc6a03cf5 509 Gene3D G3DSA:3.40.50.1380 1 186 1.0E-85 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS02040 365b8954b81736e2a57a652dc6a03cf5 509 PIRSF PIRSF000414 1 509 1.8E-212 T 25-04-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS02040 365b8954b81736e2a57a652dc6a03cf5 509 Gene3D G3DSA:3.40.140.20 238 354 1.9E-47 T 25-04-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS02040 365b8954b81736e2a57a652dc6a03cf5 509 SUPERFAMILY SSF53927 205 509 1.4E-119 T 25-04-2017 IPR016193 Cytidine deaminase-like GO:0003824 CLFO_RS11750 fef47b548978770078cd535644d88cce 487 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 105 129 - T 25-04-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CLFO_RS11750 fef47b548978770078cd535644d88cce 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 481 34.952 T 25-04-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CLFO_RS11750 fef47b548978770078cd535644d88cce 487 SUPERFAMILY SSF53244 328 481 1.44E-46 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS11750 fef47b548978770078cd535644d88cce 487 Gene3D G3DSA:3.40.1190.10 98 331 2.8E-76 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS11750 fef47b548978770078cd535644d88cce 487 Pfam PF08245 Mur ligase middle domain 107 308 1.1E-53 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS11750 fef47b548978770078cd535644d88cce 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 412 1.7E-21 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS11750 fef47b548978770078cd535644d88cce 487 Pfam PF01225 Mur ligase family, catalytic domain 23 95 9.2E-14 T 25-04-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLFO_RS11750 fef47b548978770078cd535644d88cce 487 SUPERFAMILY SSF53623 98 327 6.41E-71 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS11750 fef47b548978770078cd535644d88cce 487 SUPERFAMILY SSF63418 2 97 9.68E-24 T 25-04-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLFO_RS11750 fef47b548978770078cd535644d88cce 487 Gene3D G3DSA:3.40.1390.10 5 97 2.4E-25 T 25-04-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLFO_RS11750 fef47b548978770078cd535644d88cce 487 Gene3D G3DSA:3.90.190.20 332 474 4.7E-54 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS11750 fef47b548978770078cd535644d88cce 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 480 7.5E-169 T 25-04-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CLFO_RS13825 55cced303feedc6771b1da74965a653a 125 Pfam PF04205 FMN-binding domain 48 119 9.2E-14 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS13825 55cced303feedc6771b1da74965a653a 125 SMART SM00900 48 122 1.6E-15 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS05300 f68e92ed65d10276934f54587a2b6f65 501 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 501 175.877 T 25-04-2017 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CLFO_RS05300 f68e92ed65d10276934f54587a2b6f65 501 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 248 444 1.8E-60 T 25-04-2017 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CLFO_RS05300 f68e92ed65d10276934f54587a2b6f65 501 Gene3D G3DSA:3.40.50.880 245 457 2.1E-29 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS05300 f68e92ed65d10276934f54587a2b6f65 501 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 1 495 8.6E-166 T 25-04-2017 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CLFO_RS05300 f68e92ed65d10276934f54587a2b6f65 501 SUPERFAMILY SSF52540 1 224 2.19E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05300 f68e92ed65d10276934f54587a2b6f65 501 Gene3D G3DSA:3.40.50.300 1 230 1.1E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05300 f68e92ed65d10276934f54587a2b6f65 501 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 2 232 9.9E-28 T 25-04-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLFO_RS05300 f68e92ed65d10276934f54587a2b6f65 501 SUPERFAMILY SSF52317 186 232 6.88E-36 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS05300 f68e92ed65d10276934f54587a2b6f65 501 SUPERFAMILY SSF52317 259 405 6.88E-36 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS01440 1a9ecdb6e834e01eb9fd4b77ae8829fa 390 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 370 1.2E-84 T 25-04-2017 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLFO_RS01440 1a9ecdb6e834e01eb9fd4b77ae8829fa 390 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 4 370 3.8E-138 T 25-04-2017 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLFO_RS01440 1a9ecdb6e834e01eb9fd4b77ae8829fa 390 Gene3D G3DSA:3.40.50.2000 210 372 1.6E-10 T 25-04-2017 CLFO_RS01440 1a9ecdb6e834e01eb9fd4b77ae8829fa 390 SUPERFAMILY SSF53756 3 374 5.96E-84 T 25-04-2017 CLFO_RS01440 1a9ecdb6e834e01eb9fd4b77ae8829fa 390 Gene3D G3DSA:3.40.50.2000 1 209 1.4E-45 T 25-04-2017 CLFO_RS08855 4bea2167711a95c420a93260fbbe7592 627 SUPERFAMILY SSF49265 265 430 8.83E-15 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS08855 4bea2167711a95c420a93260fbbe7592 627 SMART SM00060 430 501 1.4E-8 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS08855 4bea2167711a95c420a93260fbbe7592 627 SMART SM00060 344 419 3.1E-4 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS08855 4bea2167711a95c420a93260fbbe7592 627 SMART SM00060 251 329 2.9 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS08855 4bea2167711a95c420a93260fbbe7592 627 Gene3D G3DSA:2.60.40.10 428 510 1.2E-10 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS08855 4bea2167711a95c420a93260fbbe7592 627 Gene3D G3DSA:2.60.40.10 344 418 4.7E-8 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS08855 4bea2167711a95c420a93260fbbe7592 627 SUPERFAMILY SSF49265 428 511 8.96E-11 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS08855 4bea2167711a95c420a93260fbbe7592 627 Gene3D G3DSA:2.60.40.10 277 343 1.2E-7 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 Pfam PF00989 PAS fold 156 257 2.2E-10 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 Gene3D G3DSA:3.40.50.300 276 453 1.2E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 SUPERFAMILY SSF52540 279 523 2.38E-71 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 SUPERFAMILY SSF55781 45 113 6.77E-5 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 Pfam PF02954 Bacterial regulatory protein, Fis family 542 585 5.8E-5 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 SMART SM00382 300 444 3.9E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 Gene3D G3DSA:1.10.8.60 454 528 1.4E-20 T 25-04-2017 CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 Gene3D G3DSA:3.30.450.40 53 112 4.1E-8 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 Pfam PF00158 Sigma-54 interaction domain 280 448 5.4E-71 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 Gene3D G3DSA:3.30.450.20 144 256 1.9E-10 T 25-04-2017 CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 SMART SM00091 155 221 0.0012 T 25-04-2017 IPR000014 PAS domain CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 SUPERFAMILY SSF55785 145 256 1.47E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 SUPERFAMILY SSF46689 494 587 1.29E-8 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 Gene3D G3DSA:1.10.10.60 529 588 1.4E-9 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS06460 1c6ec6230a7dd87026e02c18c55f4703 588 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS07930 c90d2de03b6999d1440b59d792e2ab98 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 25-04-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLFO_RS07930 c90d2de03b6999d1440b59d792e2ab98 246 SUPERFAMILY SSF102114 23 233 1.44E-30 T 25-04-2017 CLFO_RS07930 c90d2de03b6999d1440b59d792e2ab98 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 238 1.7E-98 T 25-04-2017 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 CLFO_RS07930 c90d2de03b6999d1440b59d792e2ab98 246 Pfam PF04055 Radical SAM superfamily 24 177 1.4E-27 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS07930 c90d2de03b6999d1440b59d792e2ab98 246 Gene3D G3DSA:3.80.30.10 69 239 1.7E-63 T 25-04-2017 CLFO_RS07930 c90d2de03b6999d1440b59d792e2ab98 246 Pfam PF13353 4Fe-4S single cluster domain 16 138 5.3E-24 T 25-04-2017 CLFO_RS07285 cd4f316aa355ee0b5282daeabfac610e 78 Gene3D G3DSA:1.10.260.40 2 73 1.8E-18 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS07285 cd4f316aa355ee0b5282daeabfac610e 78 SUPERFAMILY SSF47413 8 73 2.17E-17 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS07285 cd4f316aa355ee0b5282daeabfac610e 78 SMART SM00530 13 68 9.8E-12 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS07285 cd4f316aa355ee0b5282daeabfac610e 78 Pfam PF01381 Helix-turn-helix 16 68 7.6E-13 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS08600 80c7e183ff5952db33085197e425c806 222 Gene3D G3DSA:3.30.1330.90 14 136 9.8E-28 T 25-04-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CLFO_RS08600 80c7e183ff5952db33085197e425c806 222 Gene3D G3DSA:3.30.70.260 137 214 9.7E-21 T 25-04-2017 CLFO_RS08600 80c7e183ff5952db33085197e425c806 222 Pfam PF03315 Serine dehydratase beta chain 14 77 1.9E-11 T 25-04-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CLFO_RS08600 80c7e183ff5952db33085197e425c806 222 SUPERFAMILY SSF143548 19 138 1.96E-31 T 25-04-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CLFO_RS08600 80c7e183ff5952db33085197e425c806 222 PIRSF PIRSF036692 1 221 1.9E-97 T 25-04-2017 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CLFO_RS08600 80c7e183ff5952db33085197e425c806 222 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 206 4.3E-77 T 25-04-2017 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CLFO_RS08600 80c7e183ff5952db33085197e425c806 222 SUPERFAMILY SSF55021 138 214 6.65E-19 T 25-04-2017 CLFO_RS08600 80c7e183ff5952db33085197e425c806 222 Pfam PF01842 ACT domain 148 208 2.3E-13 T 25-04-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 PIRSF PIRSF039102 1 353 2.5E-112 T 25-04-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 Pfam PF01820 D-ala D-ala ligase N-terminus 4 127 6.5E-32 T 25-04-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 288 316 - T 25-04-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 346 38.017 T 25-04-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 Gene3D G3DSA:3.30.470.20 222 342 1.1E-42 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 Gene3D G3DSA:3.30.470.20 128 150 1.1E-42 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 Gene3D G3DSA:3.40.50.20 1 126 6.6E-36 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 104 115 - T 25-04-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 343 2.9E-102 T 25-04-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 Pfam PF07478 D-ala D-ala ligase C-terminus 146 342 1.1E-68 T 25-04-2017 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 Gene3D G3DSA:3.30.1490.20 151 220 1.5E-22 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 SUPERFAMILY SSF52440 1 136 2.88E-38 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS14995 2527273f579341fe80d1c3f668b94b1a 354 SUPERFAMILY SSF56059 137 347 7.44E-54 T 25-04-2017 CLFO_RS18345 ddfcf89b4c847294ad2c5acf7550bab0 227 SUPERFAMILY SSF51206 4 147 7.2E-27 T 25-04-2017 IPR018490 Cyclic nucleotide-binding-like CLFO_RS18345 ddfcf89b4c847294ad2c5acf7550bab0 227 SMART SM00419 170 218 1.0E-6 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS18345 ddfcf89b4c847294ad2c5acf7550bab0 227 Pfam PF00027 Cyclic nucleotide-binding domain 36 124 2.8E-13 T 25-04-2017 IPR000595 Cyclic nucleotide-binding domain CLFO_RS18345 ddfcf89b4c847294ad2c5acf7550bab0 227 Gene3D G3DSA:1.10.10.10 154 223 2.9E-13 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18345 ddfcf89b4c847294ad2c5acf7550bab0 227 SUPERFAMILY SSF46785 155 222 4.44E-14 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18345 ddfcf89b4c847294ad2c5acf7550bab0 227 Pfam PF13545 Crp-like helix-turn-helix domain 156 223 1.4E-14 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS18345 ddfcf89b4c847294ad2c5acf7550bab0 227 Gene3D G3DSA:2.60.120.10 13 151 2.2E-26 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS20405 0e31ceaab7da54650602585a588c00ff 479 SUPERFAMILY SSF56024 268 465 1.01E-50 T 25-04-2017 CLFO_RS20405 0e31ceaab7da54650602585a588c00ff 479 SUPERFAMILY SSF56024 103 309 4.04E-54 T 25-04-2017 CLFO_RS20405 0e31ceaab7da54650602585a588c00ff 479 SMART SM00155 392 419 8.7E-5 T 25-04-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CLFO_RS20405 0e31ceaab7da54650602585a588c00ff 479 SMART SM00155 216 243 5.7E-6 T 25-04-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CLFO_RS20405 0e31ceaab7da54650602585a588c00ff 479 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 55 1.5E-10 T 25-04-2017 IPR027379 Cardiolipin synthase N-terminal CLFO_RS20405 0e31ceaab7da54650602585a588c00ff 479 Hamap MF_01916 Cardiolipin synthase. 8 479 42.917 T 25-04-2017 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 CLFO_RS20405 0e31ceaab7da54650602585a588c00ff 479 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 5 479 2.1E-174 T 25-04-2017 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CLFO_RS20405 0e31ceaab7da54650602585a588c00ff 479 Pfam PF13091 PLD-like domain 134 276 4.2E-14 T 25-04-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 CLFO_RS20405 0e31ceaab7da54650602585a588c00ff 479 Pfam PF13091 PLD-like domain 321 446 1.1E-27 T 25-04-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 CLFO_RS20405 0e31ceaab7da54650602585a588c00ff 479 Gene3D G3DSA:3.30.870.10 110 313 4.0E-53 T 25-04-2017 CLFO_RS20405 0e31ceaab7da54650602585a588c00ff 479 Gene3D G3DSA:3.30.870.10 316 477 4.7E-40 T 25-04-2017 CLFO_RS04940 626ea26a256bef99316cafbbe1c12078 259 Gene3D G3DSA:3.40.50.300 3 228 3.1E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04940 626ea26a256bef99316cafbbe1c12078 259 SUPERFAMILY SSF52540 3 230 6.39E-57 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04940 626ea26a256bef99316cafbbe1c12078 259 SMART SM00382 28 216 4.1E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04940 626ea26a256bef99316cafbbe1c12078 259 Pfam PF00005 ABC transporter 20 168 4.3E-29 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS04090 2b66f3b5a98cbd3a9115602dcb7fd487 393 Gene3D G3DSA:3.40.50.1100 97 176 8.4E-22 T 25-04-2017 CLFO_RS04090 2b66f3b5a98cbd3a9115602dcb7fd487 393 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 52.294 T 25-04-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLFO_RS04090 2b66f3b5a98cbd3a9115602dcb7fd487 393 PIRSF PIRSF001413 1 393 2.6E-169 T 25-04-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLFO_RS04090 2b66f3b5a98cbd3a9115602dcb7fd487 393 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 2.5E-187 T 25-04-2017 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLFO_RS04090 2b66f3b5a98cbd3a9115602dcb7fd487 393 Gene3D G3DSA:3.40.50.1100 177 392 1.6E-95 T 25-04-2017 CLFO_RS04090 2b66f3b5a98cbd3a9115602dcb7fd487 393 SUPERFAMILY SSF53686 4 388 4.19E-149 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS04090 2b66f3b5a98cbd3a9115602dcb7fd487 393 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 53 377 3.7E-52 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS04090 2b66f3b5a98cbd3a9115602dcb7fd487 393 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 25-04-2017 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLFO_RS20615 edbaae8cb643fa07cc50ce030a1002db 407 Gene3D G3DSA:3.40.640.10 30 268 2.7E-48 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS20615 edbaae8cb643fa07cc50ce030a1002db 407 SUPERFAMILY SSF53383 4 402 1.53E-101 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS20615 edbaae8cb643fa07cc50ce030a1002db 407 PIRSF PIRSF000412 2 407 4.4E-103 T 25-04-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CLFO_RS20615 edbaae8cb643fa07cc50ce030a1002db 407 Pfam PF00464 Serine hydroxymethyltransferase 6 375 4.2E-56 T 25-04-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CLFO_RS20615 edbaae8cb643fa07cc50ce030a1002db 407 Gene3D G3DSA:3.90.1150.10 269 400 1.7E-29 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 7.7E-16 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 Gene3D G3DSA:2.40.30.10 214 301 1.8E-38 T 25-04-2017 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 SUPERFAMILY SSF50465 305 397 1.06E-36 T 25-04-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 PRINTS PR00315 GTP-binding elongation factor signature 79 89 4.2E-25 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.2E-25 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 PRINTS PR00315 GTP-binding elongation factor signature 59 67 4.2E-25 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 PRINTS PR00315 GTP-binding elongation factor signature 132 141 4.2E-25 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 PRINTS PR00315 GTP-binding elongation factor signature 95 106 4.2E-25 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 Gene3D G3DSA:3.40.50.300 5 213 3.1E-73 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 2.4E-34 T 25-04-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.6E-16 T 25-04-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 SUPERFAMILY SSF50447 207 304 1.71E-30 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 397 1.0E-228 T 25-04-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 Gene3D G3DSA:2.40.30.10 303 396 1.8E-47 T 25-04-2017 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 60.956 T 25-04-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 25-04-2017 IPR031157 Tr-type G domain, conserved site CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 4.9E-60 T 25-04-2017 CLFO_RS19715 2e612810d4cf6998f2eec0d4c0e15da9 397 SUPERFAMILY SSF52540 6 221 1.59E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 7.7E-16 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 Gene3D G3DSA:2.40.30.10 214 301 1.8E-38 T 25-04-2017 CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 SUPERFAMILY SSF50465 305 397 1.06E-36 T 25-04-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 PRINTS PR00315 GTP-binding elongation factor signature 79 89 4.2E-25 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.2E-25 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 PRINTS PR00315 GTP-binding elongation factor signature 59 67 4.2E-25 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 PRINTS PR00315 GTP-binding elongation factor signature 132 141 4.2E-25 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 PRINTS PR00315 GTP-binding elongation factor signature 95 106 4.2E-25 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 Gene3D G3DSA:3.40.50.300 5 213 3.1E-73 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 2.4E-34 T 25-04-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.6E-16 T 25-04-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 SUPERFAMILY SSF50447 207 304 1.71E-30 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 397 1.0E-228 T 25-04-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 Gene3D G3DSA:2.40.30.10 303 396 1.8E-47 T 25-04-2017 CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 60.956 T 25-04-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 25-04-2017 IPR031157 Tr-type G domain, conserved site CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 4.9E-60 T 25-04-2017 CLFO_RS19785 2e612810d4cf6998f2eec0d4c0e15da9 397 SUPERFAMILY SSF52540 6 221 1.59E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12535 ccedc74214379bb82680ad7975cb35c3 324 Hamap MF_00626 Germination protease [gpr]. 1 324 154.983 T 25-04-2017 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLFO_RS12535 ccedc74214379bb82680ad7975cb35c3 324 Pfam PF03418 Germination protease 255 322 3.3E-17 T 25-04-2017 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLFO_RS12535 ccedc74214379bb82680ad7975cb35c3 324 Pfam PF03418 Germination protease 10 253 3.2E-92 T 25-04-2017 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLFO_RS12535 ccedc74214379bb82680ad7975cb35c3 324 Gene3D G3DSA:3.40.50.1450 1 324 2.4E-134 T 25-04-2017 IPR023430 Peptidase HybD-like domain CLFO_RS12535 ccedc74214379bb82680ad7975cb35c3 324 SUPERFAMILY SSF53163 1 324 1.29E-116 T 25-04-2017 IPR023430 Peptidase HybD-like domain CLFO_RS12535 ccedc74214379bb82680ad7975cb35c3 324 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 2 293 2.0E-110 T 25-04-2017 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLFO_RS12535 ccedc74214379bb82680ad7975cb35c3 324 TIGRFAM TIGR01441 GPR: GPR endopeptidase 3 250 2.4E-98 T 25-04-2017 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 138 675 4.7E-124 T 25-04-2017 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 121 442 4.0E-100 T 25-04-2017 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 143 657 2.6E-86 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 SUPERFAMILY SSF81653 173 270 3.92E-27 T 25-04-2017 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 120 675 3.1E-190 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 PRINTS PR00941 Cadmium-transporting ATPase signature 236 252 8.8E-22 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 PRINTS PR00941 Cadmium-transporting ATPase signature 255 269 8.8E-22 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 PRINTS PR00941 Cadmium-transporting ATPase signature 155 175 8.8E-22 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 PRINTS PR00941 Cadmium-transporting ATPase signature 175 191 8.8E-22 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 PRINTS PR00941 Cadmium-transporting ATPase signature 101 113 8.8E-22 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 Pfam PF00702 haloacid dehalogenase-like hydrolase 367 585 1.8E-40 T 25-04-2017 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 SUPERFAMILY SSF56784 370 389 2.47E-52 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 SUPERFAMILY SSF56784 429 672 2.47E-52 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 Gene3D G3DSA:3.40.50.1000 345 385 2.0E-45 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 Gene3D G3DSA:3.40.50.1000 499 641 2.0E-45 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 572 591 1.2E-21 T 25-04-2017 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 596 608 1.2E-21 T 25-04-2017 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 371 385 1.2E-21 T 25-04-2017 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 220 234 1.2E-21 T 25-04-2017 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 519 529 1.2E-21 T 25-04-2017 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 SUPERFAMILY SSF81665 622 650 1.15E-18 T 25-04-2017 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 SUPERFAMILY SSF81665 271 365 1.15E-18 T 25-04-2017 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 SUPERFAMILY SSF81665 120 174 1.15E-18 T 25-04-2017 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 Pfam PF00122 E1-E2 ATPase 142 362 3.8E-65 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 Gene3D G3DSA:2.70.150.10 120 271 1.1E-33 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 373 379 - T 25-04-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLFO_RS19345 1119351538f9f419ae3bbf19dbc4f0d9 681 Gene3D G3DSA:3.40.1110.10 386 498 1.6E-19 T 25-04-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLFO_RS10670 3500b514cd74c00e25ebc1835051b07e 350 Pfam PF05343 M42 glutamyl aminopeptidase 44 331 3.9E-94 T 25-04-2017 IPR008007 Peptidase M42 CLFO_RS10670 3500b514cd74c00e25ebc1835051b07e 350 Gene3D G3DSA:3.40.630.10 164 345 1.8E-80 T 25-04-2017 CLFO_RS10670 3500b514cd74c00e25ebc1835051b07e 350 Gene3D G3DSA:3.40.630.10 1 71 1.8E-80 T 25-04-2017 CLFO_RS10670 3500b514cd74c00e25ebc1835051b07e 350 Gene3D G3DSA:2.40.30.40 72 158 1.1E-32 T 25-04-2017 IPR023367 Peptidase M42, domain 2 CLFO_RS10670 3500b514cd74c00e25ebc1835051b07e 350 PIRSF PIRSF001123 1 350 3.3E-110 T 25-04-2017 IPR008007 Peptidase M42 CLFO_RS10670 3500b514cd74c00e25ebc1835051b07e 350 SUPERFAMILY SSF53187 170 339 3.14E-67 T 25-04-2017 CLFO_RS10670 3500b514cd74c00e25ebc1835051b07e 350 SUPERFAMILY SSF53187 1 82 3.14E-67 T 25-04-2017 CLFO_RS10670 3500b514cd74c00e25ebc1835051b07e 350 SUPERFAMILY SSF101821 70 175 2.59E-26 T 25-04-2017 CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 Gene3D G3DSA:3.40.640.10 486 718 9.9E-35 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 273 343 5.8E-6 T 25-04-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 Pfam PF00464 Serine hydroxymethyltransferase 432 836 2.3E-45 T 25-04-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 SUPERFAMILY SSF101790 303 395 1.8E-11 T 25-04-2017 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 248 2.7E-77 T 25-04-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 SUPERFAMILY SSF103025 3 285 4.08E-78 T 25-04-2017 CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 Gene3D G3DSA:3.30.1360.120 147 236 1.8E-44 T 25-04-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 Gene3D G3DSA:3.30.1360.120 4 56 1.8E-44 T 25-04-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 390 1.4E-82 T 25-04-2017 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 Gene3D G3DSA:2.40.30.110 305 391 8.3E-17 T 25-04-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 Gene3D G3DSA:3.30.70.1400 57 143 1.5E-27 T 25-04-2017 CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 SUPERFAMILY SSF53383 431 863 2.7E-79 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS15185 64e757c3970430d2d49a7e8b97360295 882 Gene3D G3DSA:3.90.1150.10 719 858 7.2E-29 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS17710 c20093bbea4b30d5646222e31acec30c 194 SUPERFAMILY SSF100950 2 189 3.91E-49 T 25-04-2017 CLFO_RS17710 c20093bbea4b30d5646222e31acec30c 194 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 182 6.4E-45 T 25-04-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLFO_RS17710 c20093bbea4b30d5646222e31acec30c 194 Gene3D G3DSA:3.40.50.10420 1 189 2.1E-58 T 25-04-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CLFO_RS17710 c20093bbea4b30d5646222e31acec30c 194 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 182 2.4E-51 T 25-04-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLFO_RS17710 c20093bbea4b30d5646222e31acec30c 194 PIRSF PIRSF006806 1 185 1.8E-51 T 25-04-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLFO_RS21025 632900d973b7d8208d6c3e95d3afd5bb 360 Gene3D G3DSA:1.10.10.630 142 218 3.8E-19 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS21025 632900d973b7d8208d6c3e95d3afd5bb 360 Gene3D G3DSA:1.10.10.630 229 303 1.3E-18 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS21025 632900d973b7d8208d6c3e95d3afd5bb 360 SUPERFAMILY SSF158499 146 213 2.62E-14 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS21025 632900d973b7d8208d6c3e95d3afd5bb 360 Pfam PF07261 Replication initiation and membrane attachment 149 220 4.0E-20 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS21025 632900d973b7d8208d6c3e95d3afd5bb 360 Pfam PF07261 Replication initiation and membrane attachment 243 304 9.5E-15 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS21025 632900d973b7d8208d6c3e95d3afd5bb 360 PIRSF PIRSF033722 1 360 9.2E-60 T 25-04-2017 IPR017019 Predicted DNA replication protein, bacterial CLFO_RS21025 632900d973b7d8208d6c3e95d3afd5bb 360 SUPERFAMILY SSF158499 234 298 2.75E-15 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS21025 632900d973b7d8208d6c3e95d3afd5bb 360 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 154 218 2.5E-10 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS21025 632900d973b7d8208d6c3e95d3afd5bb 360 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 246 302 4.0E-11 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS08995 8f52b09ea0dae52c92abe292694beead 149 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 3.7E-55 T 25-04-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CLFO_RS08995 8f52b09ea0dae52c92abe292694beead 149 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.922 T 25-04-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CLFO_RS08995 8f52b09ea0dae52c92abe292694beead 149 SUPERFAMILY SSF69500 1 145 2.75E-58 T 25-04-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain CLFO_RS08995 8f52b09ea0dae52c92abe292694beead 149 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 2.9E-55 T 25-04-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CLFO_RS08995 8f52b09ea0dae52c92abe292694beead 149 Gene3D G3DSA:3.50.80.10 1 145 2.0E-59 T 25-04-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Pfam PF08659 KR domain 1556 1741 1.3E-58 T 25-04-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 823 930 2.7E-9 T 25-04-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2342 2460 9.0E-14 T 25-04-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SUPERFAMILY SSF53901 2376 2395 1.79E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SUPERFAMILY SSF53901 1958 2331 1.79E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2221 2338 7.4E-43 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 702 819 3.8E-38 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SUPERFAMILY SSF47336 1833 1903 4.06E-12 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Pfam PF14765 Polyketide synthase dehydratase 1081 1369 2.1E-62 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Pfam PF14765 Polyketide synthase dehydratase 11 268 3.6E-16 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Gene3D G3DSA:3.40.47.10 1965 2225 5.0E-92 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Gene3D G3DSA:1.10.1200.10 439 448 1.5E-11 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Gene3D G3DSA:1.10.1200.10 310 398 1.5E-11 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Gene3D G3DSA:1.10.1200.10 1833 1905 4.0E-15 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Gene3D G3DSA:1.10.1200.10 1943 1964 4.0E-15 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Pfam PF00550 Phosphopantetheine attachment site 1835 1897 2.5E-12 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Pfam PF00550 Phosphopantetheine attachment site 312 374 1.5E-9 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SUPERFAMILY SSF51735 1551 1797 6.2E-40 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SMART SM01294 311 377 3.9E-5 T 25-04-2017 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SMART SM00826 1081 1248 3.5E-18 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Gene3D G3DSA:3.40.50.720 1554 1745 3.3E-55 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Gene3D G3DSA:3.40.47.10 449 706 1.4E-88 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SMART SM00825 Beta-ketoacyl synthase 443 881 4.0E-186 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SMART SM00825 Beta-ketoacyl synthase 1961 2400 3.5E-209 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 441 694 1.1E-84 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1960 2213 6.9E-90 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1858 1873 - T 25-04-2017 IPR006162 Phosphopantetheine attachment site CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SMART SM00823 Phosphopantetheine attachment site 1832 1902 4.3E-7 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SMART SM00823 Phosphopantetheine attachment site 310 381 7.5E-4 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1556 1742 3.0E-49 T 25-04-2017 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SUPERFAMILY SSF53901 440 809 4.71E-85 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Gene3D G3DSA:3.40.47.10 2226 2399 1.6E-55 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 Gene3D G3DSA:3.40.47.10 707 881 5.3E-50 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SUPERFAMILY SSF47336 425 454 8.24E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04795 0129ab7d7b6cbe4b821ff9464fd82f9f 2575 SUPERFAMILY SSF47336 310 382 8.24E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS09345 8c3160775f2062d8f71f1216709a1c28 175 SMART SM00257 128 173 3.7E-8 T 25-04-2017 IPR018392 LysM domain CLFO_RS09345 8c3160775f2062d8f71f1216709a1c28 175 SMART SM00257 68 113 1.1E-6 T 25-04-2017 IPR018392 LysM domain CLFO_RS09345 8c3160775f2062d8f71f1216709a1c28 175 SMART SM00257 8 53 1.6E-8 T 25-04-2017 IPR018392 LysM domain CLFO_RS09345 8c3160775f2062d8f71f1216709a1c28 175 Pfam PF01476 LysM domain 135 173 1.1E-9 T 25-04-2017 IPR018392 LysM domain CLFO_RS09345 8c3160775f2062d8f71f1216709a1c28 175 Pfam PF01476 LysM domain 10 53 7.9E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS09345 8c3160775f2062d8f71f1216709a1c28 175 Pfam PF01476 LysM domain 69 111 1.1E-8 T 25-04-2017 IPR018392 LysM domain CLFO_RS09345 8c3160775f2062d8f71f1216709a1c28 175 SUPERFAMILY SSF54106 10 53 1.57E-7 T 25-04-2017 IPR018392 LysM domain CLFO_RS09345 8c3160775f2062d8f71f1216709a1c28 175 Gene3D G3DSA:3.10.350.10 68 112 7.7E-9 T 25-04-2017 IPR018392 LysM domain CLFO_RS09345 8c3160775f2062d8f71f1216709a1c28 175 Gene3D G3DSA:3.10.350.10 135 173 1.4E-9 T 25-04-2017 IPR018392 LysM domain CLFO_RS09345 8c3160775f2062d8f71f1216709a1c28 175 Gene3D G3DSA:3.10.350.10 11 54 1.5E-8 T 25-04-2017 IPR018392 LysM domain CLFO_RS09345 8c3160775f2062d8f71f1216709a1c28 175 SUPERFAMILY SSF54106 131 173 1.57E-7 T 25-04-2017 IPR018392 LysM domain CLFO_RS09345 8c3160775f2062d8f71f1216709a1c28 175 SUPERFAMILY SSF54106 68 112 3.53E-7 T 25-04-2017 IPR018392 LysM domain CLFO_RS10110 440b3230c587e1494d793ad44418c920 227 SMART SM00448 4 114 1.9E-47 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS10110 440b3230c587e1494d793ad44418c920 227 SMART SM00862 150 223 1.7E-26 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS10110 440b3230c587e1494d793ad44418c920 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 223 6.6E-27 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS10110 440b3230c587e1494d793ad44418c920 227 Gene3D G3DSA:1.10.10.10 130 224 8.1E-32 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10110 440b3230c587e1494d793ad44418c920 227 Pfam PF00072 Response regulator receiver domain 6 114 6.1E-32 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS10110 440b3230c587e1494d793ad44418c920 227 SUPERFAMILY SSF52172 2 127 3.84E-44 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS10110 440b3230c587e1494d793ad44418c920 227 Gene3D G3DSA:3.40.50.2300 3 127 1.4E-44 T 25-04-2017 CLFO_RS10110 440b3230c587e1494d793ad44418c920 227 SUPERFAMILY SSF46894 130 224 2.17E-28 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS03635 c46dfb272d77def19b7a5b4c80eda17e 1544 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 432 442 - T 25-04-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site CLFO_RS03635 c46dfb272d77def19b7a5b4c80eda17e 1544 Gene3D G3DSA:3.40.50.200 164 490 2.7E-101 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS03635 c46dfb272d77def19b7a5b4c80eda17e 1544 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 213 224 - T 25-04-2017 IPR023827 Peptidase S8, subtilisin, Asp-active site CLFO_RS03635 c46dfb272d77def19b7a5b4c80eda17e 1544 Gene3D G3DSA:3.30.70.80 101 163 1.7E-7 T 25-04-2017 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 CLFO_RS03635 c46dfb272d77def19b7a5b4c80eda17e 1544 SUPERFAMILY SSF52743 189 491 5.5E-90 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS03635 c46dfb272d77def19b7a5b4c80eda17e 1544 PRINTS PR00723 Subtilisin serine protease family (S8) signature 208 227 1.9E-19 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS03635 c46dfb272d77def19b7a5b4c80eda17e 1544 PRINTS PR00723 Subtilisin serine protease family (S8) signature 431 447 1.9E-19 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS03635 c46dfb272d77def19b7a5b4c80eda17e 1544 PRINTS PR00723 Subtilisin serine protease family (S8) signature 254 267 1.9E-19 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS03635 c46dfb272d77def19b7a5b4c80eda17e 1544 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 258 268 - T 25-04-2017 IPR022398 Peptidase S8, subtilisin, His-active site CLFO_RS03635 c46dfb272d77def19b7a5b4c80eda17e 1544 Pfam PF00082 Subtilase family 211 476 6.0E-50 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS02135 685b6f80adfcd57eab435467ae92211e 189 PIRSF PIRSF036382 1 189 1.1E-73 T 25-04-2017 IPR008327 Signal transduction response regulator, antiterminator CLFO_RS02135 685b6f80adfcd57eab435467ae92211e 189 SMART SM01012 131 186 2.3E-22 T 25-04-2017 IPR005561 ANTAR domain GO:0003723 CLFO_RS02135 685b6f80adfcd57eab435467ae92211e 189 Gene3D G3DSA:3.40.50.2300 3 133 8.6E-35 T 25-04-2017 CLFO_RS02135 685b6f80adfcd57eab435467ae92211e 189 SMART SM00448 3 115 1.3E-31 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS02135 685b6f80adfcd57eab435467ae92211e 189 Pfam PF00072 Response regulator receiver domain 5 115 2.5E-27 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS02135 685b6f80adfcd57eab435467ae92211e 189 Pfam PF03861 ANTAR domain 134 184 6.8E-19 T 25-04-2017 IPR005561 ANTAR domain GO:0003723 CLFO_RS02135 685b6f80adfcd57eab435467ae92211e 189 SUPERFAMILY SSF52172 2 185 6.83E-55 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS02135 685b6f80adfcd57eab435467ae92211e 189 Gene3D G3DSA:1.10.10.10 134 185 8.9E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS14020 59d04ef8d121eacf391c1f7a888ca16c 400 SMART SM00487 22 219 4.9E-47 T 25-04-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLFO_RS14020 59d04ef8d121eacf391c1f7a888ca16c 400 Pfam PF00271 Helicase conserved C-terminal domain 231 336 1.6E-24 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS14020 59d04ef8d121eacf391c1f7a888ca16c 400 SMART SM00490 255 336 1.1E-25 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS14020 59d04ef8d121eacf391c1f7a888ca16c 400 Pfam PF00270 DEAD/DEAH box helicase 27 190 1.5E-40 T 25-04-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLFO_RS14020 59d04ef8d121eacf391c1f7a888ca16c 400 SUPERFAMILY SSF52540 71 357 1.52E-57 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14020 59d04ef8d121eacf391c1f7a888ca16c 400 Gene3D G3DSA:3.40.50.300 3 208 1.8E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14020 59d04ef8d121eacf391c1f7a888ca16c 400 Gene3D G3DSA:3.40.50.300 209 364 3.6E-41 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18035 bd4b8a7d927fa3961661e379411889ce 256 SUPERFAMILY SSF63380 6 99 4.12E-20 T 25-04-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLFO_RS18035 bd4b8a7d927fa3961661e379411889ce 256 Gene3D G3DSA:3.40.50.80 118 209 9.8E-32 T 25-04-2017 CLFO_RS18035 bd4b8a7d927fa3961661e379411889ce 256 SUPERFAMILY SSF52343 94 253 1.03E-27 T 25-04-2017 CLFO_RS18035 bd4b8a7d927fa3961661e379411889ce 256 Gene3D G3DSA:2.40.30.10 5 88 2.8E-27 T 25-04-2017 CLFO_RS18035 bd4b8a7d927fa3961661e379411889ce 256 PIRSF PIRSF006816 1 256 5.6E-65 T 25-04-2017 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 CLFO_RS18035 bd4b8a7d927fa3961661e379411889ce 256 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 211 253 4.4E-17 T 25-04-2017 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLFO_RS18035 bd4b8a7d927fa3961661e379411889ce 256 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 4 255 33.939 T 25-04-2017 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit CLFO_RS18035 bd4b8a7d927fa3961661e379411889ce 256 Gene3D G3DSA:3.40.50.80 89 117 2.6E-5 T 25-04-2017 CLFO_RS18035 bd4b8a7d927fa3961661e379411889ce 256 PRINTS PR00409 Phthalate dioxygenase reductase family signature 109 128 9.3E-5 T 25-04-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 CLFO_RS18035 bd4b8a7d927fa3961661e379411889ce 256 PRINTS PR00409 Phthalate dioxygenase reductase family signature 182 190 9.3E-5 T 25-04-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 CLFO_RS18035 bd4b8a7d927fa3961661e379411889ce 256 Gene3D G3DSA:2.10.240.10 211 255 1.8E-19 T 25-04-2017 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLFO_RS17985 cb1337bf4eb648b14db205a44c0f8423 155 SUPERFAMILY SSF103039 4 152 1.7E-31 T 25-04-2017 IPR028976 CheC-like domain CLFO_RS17985 cb1337bf4eb648b14db205a44c0f8423 155 Pfam PF13690 Chemotaxis phosphatase CheX 43 127 2.9E-18 T 25-04-2017 IPR028051 Chemotaxis phosphatase CheX-like domain CLFO_RS17985 cb1337bf4eb648b14db205a44c0f8423 155 Gene3D G3DSA:3.40.1550.10 4 154 6.0E-38 T 25-04-2017 IPR028976 CheC-like domain CLFO_RS12890 916719cb6bbe36a0bfd506c6e72effb5 582 Gene3D G3DSA:3.40.50.300 337 567 2.2E-79 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12890 916719cb6bbe36a0bfd506c6e72effb5 582 SMART SM00382 363 549 2.5E-15 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12890 916719cb6bbe36a0bfd506c6e72effb5 582 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS12890 916719cb6bbe36a0bfd506c6e72effb5 582 SUPERFAMILY SSF52540 335 573 1.43E-91 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12890 916719cb6bbe36a0bfd506c6e72effb5 582 Pfam PF00664 ABC transporter transmembrane region 26 280 5.4E-27 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS12890 916719cb6bbe36a0bfd506c6e72effb5 582 SUPERFAMILY SSF90123 6 318 1.11E-48 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS12890 916719cb6bbe36a0bfd506c6e72effb5 582 Pfam PF00005 ABC transporter 356 503 3.1E-33 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS12890 916719cb6bbe36a0bfd506c6e72effb5 582 Gene3D G3DSA:1.20.1560.10 6 317 9.5E-44 T 25-04-2017 CLFO_RS03770 735072d5bfeacb88e46f7129f61783e7 335 Gene3D G3DSA:3.40.50.2300 55 172 4.5E-24 T 25-04-2017 CLFO_RS03770 735072d5bfeacb88e46f7129f61783e7 335 SUPERFAMILY SSF53822 76 333 5.62E-74 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS03770 735072d5bfeacb88e46f7129f61783e7 335 SMART SM00354 2 72 3.4E-22 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS03770 735072d5bfeacb88e46f7129f61783e7 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 9.9E-18 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS03770 735072d5bfeacb88e46f7129f61783e7 335 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.9E-38 T 25-04-2017 CLFO_RS03770 735072d5bfeacb88e46f7129f61783e7 335 Gene3D G3DSA:1.10.260.40 3 54 6.5E-22 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS03770 735072d5bfeacb88e46f7129f61783e7 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 3.0E-5 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS03770 735072d5bfeacb88e46f7129f61783e7 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 3.0E-5 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS03770 735072d5bfeacb88e46f7129f61783e7 335 SUPERFAMILY SSF47413 3 60 1.69E-17 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS03770 735072d5bfeacb88e46f7129f61783e7 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 25-04-2017 CLFO_RS03770 735072d5bfeacb88e46f7129f61783e7 335 Gene3D G3DSA:3.40.50.2300 173 332 6.0E-58 T 25-04-2017 CLFO_RS02765 97ac0a7a61a742b1666fbdacf09e1f34 358 SUPERFAMILY SSF100950 19 353 1.09E-116 T 25-04-2017 CLFO_RS02765 97ac0a7a61a742b1666fbdacf09e1f34 358 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 11 356 37.976 T 25-04-2017 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CLFO_RS02765 97ac0a7a61a742b1666fbdacf09e1f34 358 Gene3D G3DSA:3.40.50.10470 167 353 5.4E-67 T 25-04-2017 CLFO_RS02765 97ac0a7a61a742b1666fbdacf09e1f34 358 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 41 346 6.5E-110 T 25-04-2017 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CLFO_RS02765 97ac0a7a61a742b1666fbdacf09e1f34 358 Gene3D G3DSA:1.20.120.420 18 166 1.6E-52 T 25-04-2017 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CLFO_RS02765 97ac0a7a61a742b1666fbdacf09e1f34 358 Pfam PF01008 Initiation factor 2 subunit family 55 346 3.1E-78 T 25-04-2017 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 CLFO_RS02765 97ac0a7a61a742b1666fbdacf09e1f34 358 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 20 345 2.2E-129 T 25-04-2017 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CLFO_RS18150 b9850606ef43566f3a61914600460b76 95 Gene3D G3DSA:1.10.287.130 2 40 1.7E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18150 b9850606ef43566f3a61914600460b76 95 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 2 41 2.6E-10 T 25-04-2017 CLFO_RS18150 b9850606ef43566f3a61914600460b76 95 Gene3D G3DSA:3.30.565.10 41 93 8.3E-14 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18150 b9850606ef43566f3a61914600460b76 95 PRINTS PR00344 Bacterial sensor protein C-terminal signature 45 55 2.2E-8 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18150 b9850606ef43566f3a61914600460b76 95 PRINTS PR00344 Bacterial sensor protein C-terminal signature 80 93 2.2E-8 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18150 b9850606ef43566f3a61914600460b76 95 PRINTS PR00344 Bacterial sensor protein C-terminal signature 56 74 2.2E-8 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18150 b9850606ef43566f3a61914600460b76 95 SUPERFAMILY SSF55890 2 43 7.06E-11 T 25-04-2017 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CLFO_RS18150 b9850606ef43566f3a61914600460b76 95 SUPERFAMILY SSF55874 41 93 3.42E-13 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18150 b9850606ef43566f3a61914600460b76 95 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 93 5.1E-7 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 SUPERFAMILY SSF47384 288 349 2.16E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 Pfam PF07194 P2 response regulator binding domain 162 246 1.3E-16 T 25-04-2017 IPR010808 Signal transduction histidine kinase, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 Pfam PF01627 Hpt domain 1 76 5.2E-14 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 SMART SM00073 1 98 1.5E-8 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 SUPERFAMILY SSF47226 1 112 1.16E-19 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 533 2.1E-13 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 SUPERFAMILY SSF55052 159 246 7.06E-11 T 25-04-2017 IPR015162 CheY binding CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 SMART SM00260 527 670 8.6E-29 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 Gene3D G3DSA:3.30.70.1110 160 236 5.2E-4 T 25-04-2017 IPR010808 Signal transduction histidine kinase, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 287 348 3.0E-13 T 25-04-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 Gene3D G3DSA:1.20.120.160 1 123 4.1E-29 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 Gene3D G3DSA:2.30.30.40 535 556 3.2E-20 T 25-04-2017 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 Gene3D G3DSA:2.30.30.40 622 670 3.2E-20 T 25-04-2017 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 SUPERFAMILY SSF50341 534 670 1.22E-25 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 513 1.3E-8 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 1.3E-8 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 532 1.3E-8 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 Gene3D G3DSA:2.40.50.180 559 620 4.6E-5 T 25-04-2017 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 SUPERFAMILY SSF55874 350 532 6.81E-34 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 Pfam PF01584 CheW-like domain 541 671 6.4E-19 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 SMART SM01231 286 348 8.4E-16 T 25-04-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 Gene3D G3DSA:3.30.565.10 350 534 2.5E-32 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 SMART SM00387 393 535 1.4E-20 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18540 10e5cc863cde90d701a76a29b30e748b 684 Gene3D G3DSA:1.10.287.560 287 349 2.0E-17 T 25-04-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLFO_RS12790 6e1abb33623f675d6046e8a765680a4d 98 SUPERFAMILY SSF55021 7 78 1.59E-17 T 25-04-2017 CLFO_RS12790 6e1abb33623f675d6046e8a765680a4d 98 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 8 78 1.1E-19 T 25-04-2017 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CLFO_RS12790 6e1abb33623f675d6046e8a765680a4d 98 Pfam PF13710 ACT domain 16 76 1.2E-13 T 25-04-2017 CLFO_RS12790 6e1abb33623f675d6046e8a765680a4d 98 Gene3D G3DSA:3.30.70.260 8 77 4.1E-23 T 25-04-2017 CLFO_RS12790 6e1abb33623f675d6046e8a765680a4d 98 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 13 76 8.0E-26 T 25-04-2017 CLFO_RS00015 9be5fd9c0a68aaaecddb3b35fc86a0d4 69 Gene3D G3DSA:3.10.290.10 3 68 2.2E-26 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS00015 9be5fd9c0a68aaaecddb3b35fc86a0d4 69 SUPERFAMILY SSF55174 3 68 8.24E-20 T 25-04-2017 CLFO_RS00015 9be5fd9c0a68aaaecddb3b35fc86a0d4 69 Pfam PF13275 S4 domain 5 68 1.4E-25 T 25-04-2017 CLFO_RS20380 ea03c606438c58956d5a165003256c33 238 Pfam PF07729 FCD domain 98 222 5.3E-21 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS20380 ea03c606438c58956d5a165003256c33 238 SMART SM00345 14 73 5.7E-19 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20380 ea03c606438c58956d5a165003256c33 238 Gene3D G3DSA:1.20.120.530 95 230 9.0E-25 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS20380 ea03c606438c58956d5a165003256c33 238 SUPERFAMILY SSF46785 1 75 2.34E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20380 ea03c606438c58956d5a165003256c33 238 Gene3D G3DSA:1.10.10.10 7 74 3.9E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20380 ea03c606438c58956d5a165003256c33 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.4E-8 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20380 ea03c606438c58956d5a165003256c33 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.4E-8 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20380 ea03c606438c58956d5a165003256c33 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 2.7E-20 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20380 ea03c606438c58956d5a165003256c33 238 SUPERFAMILY SSF48008 96 229 6.28E-22 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS20380 ea03c606438c58956d5a165003256c33 238 SMART SM00895 98 223 8.5E-17 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS19920 1bab2d893f5153bf3fab3e161a0ad334 442 Pfam PF00155 Aminotransferase class I and II 92 429 1.7E-25 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS19920 1bab2d893f5153bf3fab3e161a0ad334 442 Gene3D G3DSA:3.40.640.10 106 330 2.7E-64 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS19920 1bab2d893f5153bf3fab3e161a0ad334 442 SUPERFAMILY SSF46785 2 70 4.24E-14 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS19920 1bab2d893f5153bf3fab3e161a0ad334 442 SUPERFAMILY SSF53383 67 432 1.75E-68 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS19920 1bab2d893f5153bf3fab3e161a0ad334 442 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 65 3.7E-9 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS19920 1bab2d893f5153bf3fab3e161a0ad334 442 SMART SM00345 7 66 5.5E-9 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS19920 1bab2d893f5153bf3fab3e161a0ad334 442 Gene3D G3DSA:1.10.10.10 3 67 3.6E-18 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15715 fac65bdca913a5b2dfa3c108609b9fd8 353 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 3 353 3.3E-53 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS15715 fac65bdca913a5b2dfa3c108609b9fd8 353 Pfam PF03845 Spore germination protein 11 315 1.9E-20 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS10815 633a76d5fb41102e401fc6d2e6101598 446 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 438 6.9E-164 T 25-04-2017 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CLFO_RS10815 633a76d5fb41102e401fc6d2e6101598 446 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 438 8.4E-142 T 25-04-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CLFO_RS10815 633a76d5fb41102e401fc6d2e6101598 446 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 3 440 67.104 T 25-04-2017 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CLFO_RS10815 633a76d5fb41102e401fc6d2e6101598 446 Pfam PF01938 TRAM domain 379 441 1.7E-6 T 25-04-2017 IPR002792 TRAM domain CLFO_RS10815 633a76d5fb41102e401fc6d2e6101598 446 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 25-04-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 CLFO_RS10815 633a76d5fb41102e401fc6d2e6101598 446 Gene3D G3DSA:2.40.50.140 379 443 1.7E-21 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10815 633a76d5fb41102e401fc6d2e6101598 446 SUPERFAMILY SSF102114 130 369 8.24E-63 T 25-04-2017 CLFO_RS10815 633a76d5fb41102e401fc6d2e6101598 446 Gene3D G3DSA:3.80.30.20 143 374 6.1E-80 T 25-04-2017 IPR023404 Radical SAM, alpha/beta horseshoe CLFO_RS10815 633a76d5fb41102e401fc6d2e6101598 446 SMART SM00729 145 363 3.0E-61 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS10815 633a76d5fb41102e401fc6d2e6101598 446 Pfam PF00919 Uncharacterized protein family UPF0004 5 102 5.7E-28 T 25-04-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CLFO_RS10815 633a76d5fb41102e401fc6d2e6101598 446 Pfam PF04055 Radical SAM superfamily 150 321 4.3E-29 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 SUPERFAMILY SSF55781 390 555 4.49E-11 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 Gene3D G3DSA:3.30.450.20 592 686 6.0E-7 T 25-04-2017 CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 SMART SM00267 677 849 4.8E-71 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 SMART SM00065 403 561 0.0031 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 SMART SM00052 859 1105 6.9E-127 T 25-04-2017 IPR001633 EAL domain CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 Pfam PF02743 Cache domain 42 281 1.1E-13 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 685 847 2.1E-47 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 Pfam PF00990 Diguanylate cyclase, GGDEF domain 688 845 1.1E-53 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 Pfam PF00563 EAL domain 865 1100 1.7E-77 T 25-04-2017 IPR001633 EAL domain CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 SUPERFAMILY SSF141868 864 1112 6.28E-96 T 25-04-2017 IPR001633 EAL domain CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 Gene3D G3DSA:3.30.70.270 689 855 3.6E-58 T 25-04-2017 CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 SUPERFAMILY SSF55073 693 850 4.71E-52 T 25-04-2017 IPR029787 Nucleotide cyclase CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 Gene3D G3DSA:3.30.450.40 377 562 4.0E-12 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 SUPERFAMILY SSF158472 326 373 1.83E-5 T 25-04-2017 CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 SUPERFAMILY SSF55785 596 685 1.93E-6 T 25-04-2017 IPR000014 PAS domain CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 Gene3D G3DSA:3.20.20.450 862 1112 4.2E-104 T 25-04-2017 IPR001633 EAL domain CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 Gene3D G3DSA:3.30.450.20 188 295 2.2E-11 T 25-04-2017 CLFO_RS06860 1dd37022dc4588164d05a2dbb4a54811 1117 Pfam PF00672 HAMP domain 303 371 1.6E-7 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS09005 e5ac7007f92a07a273851e26ef594636 490 Pfam PF04055 Radical SAM superfamily 176 352 6.0E-22 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS09005 e5ac7007f92a07a273851e26ef594636 490 Gene3D G3DSA:3.80.30.20 170 406 1.5E-39 T 25-04-2017 IPR023404 Radical SAM, alpha/beta horseshoe CLFO_RS09005 e5ac7007f92a07a273851e26ef594636 490 SUPERFAMILY SSF102114 161 480 4.97E-79 T 25-04-2017 CLFO_RS09005 e5ac7007f92a07a273851e26ef594636 490 SMART SM00729 171 396 5.2E-48 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS09005 e5ac7007f92a07a273851e26ef594636 490 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 89 488 2.8E-172 T 25-04-2017 IPR023995 Coproporphyrinogen III oxidase CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 25-04-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 Gene3D G3DSA:3.40.50.920 535 660 6.3E-44 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 Gene3D G3DSA:3.40.50.970 5 323 1.2E-116 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 25-04-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 6.9E-45 T 25-04-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 Gene3D G3DSA:3.40.50.970 339 532 5.9E-73 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 Pfam PF02780 Transketolase, C-terminal domain 537 651 3.1E-13 T 25-04-2017 IPR033248 Transketolase, C-terminal domain CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 658 6.0E-275 T 25-04-2017 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 SUPERFAMILY SSF52518 348 526 1.34E-66 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 SMART SM00861 354 525 7.7E-66 T 25-04-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 331 4.0E-145 T 25-04-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 SUPERFAMILY SSF52922 532 660 2.09E-38 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS16675 01fab6f142519f7acc2cdacbc3d14c90 662 SUPERFAMILY SSF52518 5 324 5.4E-110 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS03070 7625bae53b3831c91af71c00ff417d1e 264 ProSitePatterns PS00902 Glutamate 5-kinase signature. 212 229 - T 25-04-2017 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CLFO_RS03070 7625bae53b3831c91af71c00ff417d1e 264 Gene3D G3DSA:3.40.1160.10 9 260 1.9E-53 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS03070 7625bae53b3831c91af71c00ff417d1e 264 Hamap MF_00456 Glutamate 5-kinase [proB]. 10 263 34.07 T 25-04-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CLFO_RS03070 7625bae53b3831c91af71c00ff417d1e 264 PRINTS PR00474 Glutamate 5-kinase family signature 81 109 2.7E-45 T 25-04-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CLFO_RS03070 7625bae53b3831c91af71c00ff417d1e 264 PRINTS PR00474 Glutamate 5-kinase family signature 121 142 2.7E-45 T 25-04-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CLFO_RS03070 7625bae53b3831c91af71c00ff417d1e 264 PRINTS PR00474 Glutamate 5-kinase family signature 47 61 2.7E-45 T 25-04-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CLFO_RS03070 7625bae53b3831c91af71c00ff417d1e 264 PRINTS PR00474 Glutamate 5-kinase family signature 153 180 2.7E-45 T 25-04-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CLFO_RS03070 7625bae53b3831c91af71c00ff417d1e 264 PRINTS PR00474 Glutamate 5-kinase family signature 214 234 2.7E-45 T 25-04-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CLFO_RS03070 7625bae53b3831c91af71c00ff417d1e 264 PIRSF PIRSF000729 5 264 2.2E-92 T 25-04-2017 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CLFO_RS03070 7625bae53b3831c91af71c00ff417d1e 264 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 262 2.2E-89 T 25-04-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CLFO_RS03070 7625bae53b3831c91af71c00ff417d1e 264 Pfam PF00696 Amino acid kinase family 10 240 1.5E-42 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS03070 7625bae53b3831c91af71c00ff417d1e 264 SUPERFAMILY SSF53633 10 260 7.72E-64 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS03275 8842005efb9c8b853433f1538ce53ed5 118 SUPERFAMILY SSF160148 47 118 1.03E-23 T 25-04-2017 IPR012460 Protein of unknown function DUF1667 CLFO_RS03275 8842005efb9c8b853433f1538ce53ed5 118 Pfam PF07892 Protein of unknown function (DUF1667) 35 116 2.3E-31 T 25-04-2017 IPR012460 Protein of unknown function DUF1667 CLFO_RS03275 8842005efb9c8b853433f1538ce53ed5 118 Gene3D G3DSA:3.10.530.10 47 116 1.2E-29 T 25-04-2017 IPR012460 Protein of unknown function DUF1667 CLFO_RS14870 91c523bd580a9748e319c54d5828c1d6 335 Pfam PF12733 Cadherin-like beta sandwich domain 157 234 2.7E-14 T 25-04-2017 IPR025883 Cadherin-like beta sandwich domain CLFO_RS14870 91c523bd580a9748e319c54d5828c1d6 335 Pfam PF12733 Cadherin-like beta sandwich domain 257 334 1.7E-11 T 25-04-2017 IPR025883 Cadherin-like beta sandwich domain CLFO_RS14870 91c523bd580a9748e319c54d5828c1d6 335 Gene3D G3DSA:2.60.120.260 3 138 2.2E-17 T 25-04-2017 IPR008979 Galactose-binding domain-like CLFO_RS14870 91c523bd580a9748e319c54d5828c1d6 335 SUPERFAMILY SSF49785 1 138 2.98E-18 T 25-04-2017 IPR008979 Galactose-binding domain-like CLFO_RS14870 91c523bd580a9748e319c54d5828c1d6 335 Gene3D G3DSA:2.60.40.1560 270 326 6.0E-5 T 25-04-2017 CLFO_RS14870 91c523bd580a9748e319c54d5828c1d6 335 Pfam PF00754 F5/8 type C domain 20 133 1.2E-12 T 25-04-2017 IPR000421 Coagulation factor 5/8 C-terminal domain CLFO_RS03330 ba0201284583d3b059bf3c2a3b62726a 277 SUPERFAMILY SSF53335 5 274 7.26E-86 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS03330 ba0201284583d3b059bf3c2a3b62726a 277 Gene3D G3DSA:3.40.50.150 57 274 9.8E-85 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS03330 ba0201284583d3b059bf3c2a3b62726a 277 Gene3D G3DSA:2.30.140.10 4 54 1.1E-15 T 25-04-2017 CLFO_RS03330 ba0201284583d3b059bf3c2a3b62726a 277 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 79 92 - T 25-04-2017 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CLFO_RS03330 ba0201284583d3b059bf3c2a3b62726a 277 TIGRFAM TIGR00417 speE: spermidine synthase 7 269 3.1E-99 T 25-04-2017 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CLFO_RS03330 ba0201284583d3b059bf3c2a3b62726a 277 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 275 37.369 T 25-04-2017 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CLFO_RS03330 ba0201284583d3b059bf3c2a3b62726a 277 Pfam PF01564 Spermine/spermidine synthase 11 236 2.7E-78 T 25-04-2017 CLFO_RS15535 2514f3a0000f0de78a9f9a5ae44f864b 314 SUPERFAMILY SSF103481 219 299 3.01E-12 T 25-04-2017 CLFO_RS15535 2514f3a0000f0de78a9f9a5ae44f864b 314 Pfam PF00892 EamA-like transporter family 155 296 1.1E-18 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS15535 2514f3a0000f0de78a9f9a5ae44f864b 314 Pfam PF00892 EamA-like transporter family 9 141 2.0E-23 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS15535 2514f3a0000f0de78a9f9a5ae44f864b 314 SUPERFAMILY SSF103481 42 142 1.24E-13 T 25-04-2017 CLFO_RS14505 0f1102e8b1db31481bc3f02dd9f53bd1 224 Gene3D G3DSA:3.40.50.2300 1 124 5.1E-32 T 25-04-2017 CLFO_RS14505 0f1102e8b1db31481bc3f02dd9f53bd1 224 SMART SM00448 2 112 5.6E-30 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS14505 0f1102e8b1db31481bc3f02dd9f53bd1 224 SUPERFAMILY SSF52172 1 130 2.13E-33 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS14505 0f1102e8b1db31481bc3f02dd9f53bd1 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 223 2.8E-23 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS14505 0f1102e8b1db31481bc3f02dd9f53bd1 224 Gene3D G3DSA:1.10.10.10 128 223 1.5E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS14505 0f1102e8b1db31481bc3f02dd9f53bd1 224 SUPERFAMILY SSF46894 127 223 1.62E-24 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS14505 0f1102e8b1db31481bc3f02dd9f53bd1 224 SMART SM00862 147 223 3.9E-20 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS14505 0f1102e8b1db31481bc3f02dd9f53bd1 224 Pfam PF00072 Response regulator receiver domain 4 112 7.1E-22 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS16435 dbc84978e2f2d27814963286e6570d24 340 PIRSF PIRSF001549 1 339 8.0E-23 T 25-04-2017 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CLFO_RS16435 dbc84978e2f2d27814963286e6570d24 340 Gene3D G3DSA:3.30.930.10 23 319 1.1E-22 T 25-04-2017 CLFO_RS16435 dbc84978e2f2d27814963286e6570d24 340 Pfam PF13393 Histidyl-tRNA synthetase 74 296 3.2E-9 T 25-04-2017 CLFO_RS16435 dbc84978e2f2d27814963286e6570d24 340 SUPERFAMILY SSF55681 3 325 1.73E-18 T 25-04-2017 CLFO_RS09510 7015d9ba7be138f787d0f317b19bfa0f 251 Gene3D G3DSA:1.10.10.60 143 195 6.8E-10 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09510 7015d9ba7be138f787d0f317b19bfa0f 251 Gene3D G3DSA:3.40.50.2300 3 131 4.2E-33 T 25-04-2017 CLFO_RS09510 7015d9ba7be138f787d0f317b19bfa0f 251 SMART SM00448 4 121 4.9E-26 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS09510 7015d9ba7be138f787d0f317b19bfa0f 251 SMART SM00342 159 244 1.7E-25 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS09510 7015d9ba7be138f787d0f317b19bfa0f 251 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 228 1.1E-6 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS09510 7015d9ba7be138f787d0f317b19bfa0f 251 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 244 1.1E-6 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS09510 7015d9ba7be138f787d0f317b19bfa0f 251 Gene3D G3DSA:1.10.10.60 196 248 7.5E-16 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09510 7015d9ba7be138f787d0f317b19bfa0f 251 SUPERFAMILY SSF46689 195 248 1.08E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09510 7015d9ba7be138f787d0f317b19bfa0f 251 SUPERFAMILY SSF52172 1 132 9.82E-33 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS09510 7015d9ba7be138f787d0f317b19bfa0f 251 Pfam PF00072 Response regulator receiver domain 6 115 7.3E-25 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS09510 7015d9ba7be138f787d0f317b19bfa0f 251 Pfam PF12833 Helix-turn-helix domain 165 245 3.7E-19 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS20215 de7e247807d9b20de009781f01acb570 681 Pfam PF02743 Cache domain 25 225 3.5E-15 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS20215 de7e247807d9b20de009781f01acb570 681 Gene3D G3DSA:1.10.287.950 621 670 2.4E-44 T 25-04-2017 CLFO_RS20215 de7e247807d9b20de009781f01acb570 681 Gene3D G3DSA:1.10.287.950 418 578 2.4E-44 T 25-04-2017 CLFO_RS20215 de7e247807d9b20de009781f01acb570 681 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 485 678 5.5E-36 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS20215 de7e247807d9b20de009781f01acb570 681 SMART SM00304 320 375 0.0081 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS20215 de7e247807d9b20de009781f01acb570 681 Pfam PF00672 HAMP domain 300 371 7.0E-8 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS20215 de7e247807d9b20de009781f01acb570 681 SUPERFAMILY SSF58104 410 678 8.89E-61 T 25-04-2017 CLFO_RS20215 de7e247807d9b20de009781f01acb570 681 SUPERFAMILY SSF58104 349 377 8.89E-61 T 25-04-2017 CLFO_RS20215 de7e247807d9b20de009781f01acb570 681 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 502 529 4.5E-18 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS20215 de7e247807d9b20de009781f01acb570 681 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 4.5E-18 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS20215 de7e247807d9b20de009781f01acb570 681 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 531 560 4.5E-18 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS20215 de7e247807d9b20de009781f01acb570 681 SMART SM00283 404 679 8.5E-51 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS18505 9d4816e8c0532f22643f111124a489d8 444 Pfam PF12833 Helix-turn-helix domain 364 443 1.3E-22 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS18505 9d4816e8c0532f22643f111124a489d8 444 SUPERFAMILY SSF46689 395 443 2.6E-13 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS18505 9d4816e8c0532f22643f111124a489d8 444 SMART SM00342 358 441 1.0E-33 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS18505 9d4816e8c0532f22643f111124a489d8 444 Pfam PF10114 Sensory domain found in PocR 22 190 7.3E-45 T 25-04-2017 IPR018771 PocR domain CLFO_RS18505 9d4816e8c0532f22643f111124a489d8 444 Gene3D G3DSA:1.10.10.60 339 394 2.4E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS18505 9d4816e8c0532f22643f111124a489d8 444 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 425 441 1.9E-7 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS18505 9d4816e8c0532f22643f111124a489d8 444 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 410 425 1.9E-7 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS18505 9d4816e8c0532f22643f111124a489d8 444 SUPERFAMILY SSF46689 343 392 1.52E-7 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS18505 9d4816e8c0532f22643f111124a489d8 444 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 395 437 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS18505 9d4816e8c0532f22643f111124a489d8 444 Gene3D G3DSA:1.10.10.60 395 443 2.5E-17 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS07005 acd8c133d5c3fc958dca2487f5a0d56f 455 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 17 435 1.5E-121 T 25-04-2017 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CLFO_RS07005 acd8c133d5c3fc958dca2487f5a0d56f 455 Gene3D G3DSA:3.40.50.1980 159 260 2.3E-31 T 25-04-2017 CLFO_RS07005 acd8c133d5c3fc958dca2487f5a0d56f 455 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 35 42 - T 25-04-2017 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CLFO_RS07005 acd8c133d5c3fc958dca2487f5a0d56f 455 Gene3D G3DSA:3.40.50.1980 289 411 6.7E-39 T 25-04-2017 CLFO_RS07005 acd8c133d5c3fc958dca2487f5a0d56f 455 SUPERFAMILY SSF53807 9 448 1.77E-130 T 25-04-2017 CLFO_RS07005 acd8c133d5c3fc958dca2487f5a0d56f 455 Gene3D G3DSA:3.40.50.1980 17 158 1.8E-46 T 25-04-2017 CLFO_RS04140 e45852b205566264f976899380d1597d 245 Gene3D G3DSA:3.40.50.300 3 239 3.1E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04140 e45852b205566264f976899380d1597d 245 SUPERFAMILY SSF52540 4 238 6.02E-64 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04140 e45852b205566264f976899380d1597d 245 SMART SM00382 29 224 7.3E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04140 e45852b205566264f976899380d1597d 245 Pfam PF00005 ABC transporter 20 175 1.2E-35 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS04140 e45852b205566264f976899380d1597d 245 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS04140 e45852b205566264f976899380d1597d 245 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 3 245 6.3E-99 T 25-04-2017 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 CLFO_RS06580 57ed8375e5d07312f8e04e0e0daf4e81 325 SMART SM00729 56 263 1.7E-33 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS06580 57ed8375e5d07312f8e04e0e0daf4e81 325 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 234 323 2.1E-16 T 25-04-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLFO_RS06580 57ed8375e5d07312f8e04e0e0daf4e81 325 Gene3D G3DSA:3.20.20.70 17 324 4.3E-82 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS06580 57ed8375e5d07312f8e04e0e0daf4e81 325 Pfam PF04055 Radical SAM superfamily 63 212 5.9E-17 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS06580 57ed8375e5d07312f8e04e0e0daf4e81 325 PIRSF PIRSF001619 1 325 8.8E-114 T 25-04-2017 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLFO_RS06580 57ed8375e5d07312f8e04e0e0daf4e81 325 Hamap MF_01694 Biotin synthase [bioB]. 16 325 40.688 T 25-04-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLFO_RS06580 57ed8375e5d07312f8e04e0e0daf4e81 325 SUPERFAMILY SSF102114 16 324 4.58E-67 T 25-04-2017 CLFO_RS06580 57ed8375e5d07312f8e04e0e0daf4e81 325 TIGRFAM TIGR00433 bioB: biotin synthase 29 323 6.0E-115 T 25-04-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLFO_RS06580 57ed8375e5d07312f8e04e0e0daf4e81 325 SMART SM00876 234 325 8.7E-36 T 25-04-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLFO_RS12970 891ca70faa5e113be8f1dc7a38906e5d 193 Pfam PF02342 TerD domain 1 188 1.5E-84 T 25-04-2017 IPR003325 TerD domain GO:0006950 CLFO_RS12970 891ca70faa5e113be8f1dc7a38906e5d 193 Gene3D G3DSA:2.60.60.30 18 186 2.0E-70 T 25-04-2017 CLFO_RS08850 97d5cf13e0ef40aa4f35d67894f01246 571 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 24 188 1.0E-11 T 25-04-2017 IPR007119 Phage minor structural protein, N-terminal domain CLFO_RS13640 85c47586e8e4cc4c06ca75727eb34a1b 226 PIRSF PIRSF006171 1 226 2.0E-79 T 25-04-2017 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CLFO_RS13640 85c47586e8e4cc4c06ca75727eb34a1b 226 Gene3D G3DSA:3.40.50.2300 1 128 2.6E-37 T 25-04-2017 CLFO_RS13640 85c47586e8e4cc4c06ca75727eb34a1b 226 Pfam PF00072 Response regulator receiver domain 4 115 1.5E-29 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13640 85c47586e8e4cc4c06ca75727eb34a1b 226 Gene3D G3DSA:1.10.10.10 157 201 6.4E-6 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13640 85c47586e8e4cc4c06ca75727eb34a1b 226 SUPERFAMILY SSF52172 1 191 4.55E-39 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS13640 85c47586e8e4cc4c06ca75727eb34a1b 226 SMART SM00448 2 115 8.8E-31 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13640 85c47586e8e4cc4c06ca75727eb34a1b 226 Pfam PF08279 HTH domain 161 198 1.9E-5 T 25-04-2017 IPR013196 Helix-turn-helix, type 11 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 691 707 - T 25-04-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 Gene3D G3DSA:3.40.1170.10 1 111 3.3E-48 T 25-04-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 SMART SM00533 284 592 6.4E-100 T 25-04-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 Gene3D G3DSA:3.30.420.110 117 256 2.6E-35 T 25-04-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 SUPERFAMILY SSF48334 267 566 8.24E-93 T 25-04-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 Pfam PF01624 MutS domain I 1 110 7.3E-44 T 25-04-2017 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 Pfam PF05188 MutS domain II 119 252 2.4E-25 T 25-04-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 861 0.0 T 25-04-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 SUPERFAMILY SSF53150 105 266 3.53E-39 T 25-04-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 Gene3D G3DSA:1.10.1420.10 263 469 2.3E-56 T 25-04-2017 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 856 25.648 T 25-04-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 SMART SM00534 610 797 2.0E-119 T 25-04-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 PIRSF PIRSF037677 1 848 1.3E-180 T 25-04-2017 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 Gene3D G3DSA:3.40.50.300 568 800 9.8E-85 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 SUPERFAMILY SSF52540 568 800 4.19E-63 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 SUPERFAMILY SSF55271 1 106 2.75E-40 T 25-04-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 Pfam PF05190 MutS family domain IV 429 519 8.4E-31 T 25-04-2017 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 Pfam PF00488 MutS domain V 614 799 6.7E-88 T 25-04-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS10305 3bdebfce13c3fbe930450b3f937c1e9d 867 Pfam PF05192 MutS domain III 269 560 1.6E-44 T 25-04-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLFO_RS02010 2aab521de0f579e5bb15a760b9726a8b 367 Gene3D G3DSA:3.40.50.20 1 94 2.7E-28 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS02010 2aab521de0f579e5bb15a760b9726a8b 367 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 1 347 38.767 T 25-04-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CLFO_RS02010 2aab521de0f579e5bb15a760b9726a8b 367 SUPERFAMILY SSF56059 86 287 4.24E-63 T 25-04-2017 CLFO_RS02010 2aab521de0f579e5bb15a760b9726a8b 367 SUPERFAMILY SSF51246 290 359 5.02E-14 T 25-04-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS02010 2aab521de0f579e5bb15a760b9726a8b 367 Gene3D G3DSA:3.30.1490.20 101 166 1.5E-17 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS02010 2aab521de0f579e5bb15a760b9726a8b 367 Pfam PF02222 ATP-grasp domain 95 266 7.0E-57 T 25-04-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CLFO_RS02010 2aab521de0f579e5bb15a760b9726a8b 367 Gene3D G3DSA:3.30.470.20 167 360 5.3E-72 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS02010 2aab521de0f579e5bb15a760b9726a8b 367 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 1 350 2.1E-124 T 25-04-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CLFO_RS02010 2aab521de0f579e5bb15a760b9726a8b 367 SUPERFAMILY SSF52440 1 83 2.88E-19 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS04410 f484206e3864b516894cc657df46318c 257 Gene3D G3DSA:3.40.50.2300 3 120 3.3E-28 T 25-04-2017 CLFO_RS04410 f484206e3864b516894cc657df46318c 257 SMART SM00850 155 254 1.6E-34 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS04410 f484206e3864b516894cc657df46318c 257 SUPERFAMILY SSF52172 4 127 3.7E-28 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS04410 f484206e3864b516894cc657df46318c 257 Gene3D G3DSA:2.40.50.40 147 214 1.9E-21 T 25-04-2017 CLFO_RS04410 f484206e3864b516894cc657df46318c 257 SMART SM00448 3 114 2.0E-23 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS04410 f484206e3864b516894cc657df46318c 257 Pfam PF00072 Response regulator receiver domain 5 114 1.9E-22 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS04410 f484206e3864b516894cc657df46318c 257 Gene3D G3DSA:2.20.25.10 222 255 1.4E-6 T 25-04-2017 CLFO_RS04410 f484206e3864b516894cc657df46318c 257 Pfam PF04397 LytTr DNA-binding domain 155 253 7.0E-27 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS01595 f60ffb6c254abce3251d58a19f96c903 532 Pfam PF10114 Sensory domain found in PocR 139 291 7.1E-33 T 25-04-2017 IPR018771 PocR domain CLFO_RS01595 f60ffb6c254abce3251d58a19f96c903 532 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 525 2.4E-11 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01595 f60ffb6c254abce3251d58a19f96c903 532 SUPERFAMILY SSF55874 379 523 1.11E-19 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01595 f60ffb6c254abce3251d58a19f96c903 532 SMART SM00387 418 526 1.2E-8 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01595 f60ffb6c254abce3251d58a19f96c903 532 Gene3D G3DSA:3.30.565.10 373 526 3.3E-22 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01595 f60ffb6c254abce3251d58a19f96c903 532 Pfam PF06580 Histidine kinase 325 401 9.3E-22 T 25-04-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLFO_RS01595 f60ffb6c254abce3251d58a19f96c903 532 Gene3D G3DSA:2.60.120.10 16 111 1.7E-20 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS01595 f60ffb6c254abce3251d58a19f96c903 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 469 1.4E-7 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS01595 f60ffb6c254abce3251d58a19f96c903 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 523 1.4E-7 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS01595 f60ffb6c254abce3251d58a19f96c903 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 501 1.4E-7 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS01595 f60ffb6c254abce3251d58a19f96c903 532 Pfam PF07883 Cupin domain 42 111 7.2E-14 T 25-04-2017 IPR013096 Cupin 2, conserved barrel CLFO_RS01595 f60ffb6c254abce3251d58a19f96c903 532 SUPERFAMILY SSF51182 7 135 1.25E-21 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS05320 3ae73695d3ddbc7242f88532cb4ba07f 133 Gene3D G3DSA:3.30.70.1290 2 133 9.9E-47 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS05320 3ae73695d3ddbc7242f88532cb4ba07f 133 Pfam PF01797 Transposase IS200 like 11 129 1.6E-40 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS05320 3ae73695d3ddbc7242f88532cb4ba07f 133 SUPERFAMILY SSF143422 2 130 2.09E-45 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS05320 3ae73695d3ddbc7242f88532cb4ba07f 133 SMART SM01321 10 129 6.7E-42 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 311 6.9E-125 T 25-04-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 152 7.7E-24 T 25-04-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 SUPERFAMILY SSF55257 4 50 1.7E-32 T 25-04-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 SUPERFAMILY SSF55257 172 224 1.7E-32 T 25-04-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 SUPERFAMILY SSF47789 247 311 2.35E-24 T 25-04-2017 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 SMART SM00662 20 227 2.1E-100 T 25-04-2017 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 SUPERFAMILY SSF56553 50 171 3.53E-45 T 25-04-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 292 3.0E-15 T 25-04-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 6.7E-25 T 25-04-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 37.983 T 25-04-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 Gene3D G3DSA:1.10.150.20 246 313 2.7E-32 T 25-04-2017 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 305 3.9E-28 T 25-04-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 Gene3D G3DSA:3.30.1360.10 4 64 2.0E-11 T 25-04-2017 CLFO_RS19560 3a7ca70c93f31e25a55e9ae716d7d64d 315 Gene3D G3DSA:2.170.120.12 65 170 1.1E-46 T 25-04-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS17235 b4dd28dc66f8c5f6b57553dd3357074f 584 Pfam PF07508 Recombinase 200 305 2.6E-23 T 25-04-2017 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CLFO_RS17235 b4dd28dc66f8c5f6b57553dd3357074f 584 SMART SM00857 28 177 9.9E-42 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS17235 b4dd28dc66f8c5f6b57553dd3357074f 584 SUPERFAMILY SSF53041 27 176 3.27E-33 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS17235 b4dd28dc66f8c5f6b57553dd3357074f 584 Gene3D G3DSA:3.40.50.1390 27 158 1.2E-28 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS17235 b4dd28dc66f8c5f6b57553dd3357074f 584 Pfam PF00239 Resolvase, N terminal domain 30 176 2.6E-28 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS17235 b4dd28dc66f8c5f6b57553dd3357074f 584 Pfam PF13408 Recombinase zinc beta ribbon domain 328 387 1.2E-7 T 25-04-2017 IPR025827 Recombinase zinc beta ribbon domain CLFO_RS12540 a33408997d0a2f51916aabb455df1011 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.4E-22 T 25-04-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS12540 a33408997d0a2f51916aabb455df1011 87 Gene3D G3DSA:1.20.58.110 1 86 6.6E-26 T 25-04-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS12540 a33408997d0a2f51916aabb455df1011 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 16 80 4.0E-22 T 25-04-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS12540 a33408997d0a2f51916aabb455df1011 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.293 T 25-04-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS12540 a33408997d0a2f51916aabb455df1011 87 Pfam PF01649 Ribosomal protein S20 2 84 1.6E-24 T 25-04-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS12540 a33408997d0a2f51916aabb455df1011 87 SUPERFAMILY SSF46992 3 86 1.22E-25 T 25-04-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19380 d65f2e845f4b2b122c6ad721961d7601 122 Gene3D G3DSA:1.10.10.10 5 88 5.1E-27 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS19380 d65f2e845f4b2b122c6ad721961d7601 122 SUPERFAMILY SSF46785 6 103 2.01E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS19380 d65f2e845f4b2b122c6ad721961d7601 122 SMART SM00418 5 83 1.8E-22 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS19380 d65f2e845f4b2b122c6ad721961d7601 122 Pfam PF01022 Bacterial regulatory protein, arsR family 14 57 2.7E-14 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS19380 d65f2e845f4b2b122c6ad721961d7601 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 6.2E-15 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS19380 d65f2e845f4b2b122c6ad721961d7601 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 6.2E-15 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS19380 d65f2e845f4b2b122c6ad721961d7601 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 26 37 6.2E-15 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS19380 d65f2e845f4b2b122c6ad721961d7601 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 6.2E-15 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS15050 e1e20c81059b8740dfacd657c53f1ada 228 Gene3D G3DSA:1.10.10.10 125 222 1.9E-28 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15050 e1e20c81059b8740dfacd657c53f1ada 228 Pfam PF00072 Response regulator receiver domain 3 112 2.4E-29 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15050 e1e20c81059b8740dfacd657c53f1ada 228 SMART SM00448 1 112 3.0E-40 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15050 e1e20c81059b8740dfacd657c53f1ada 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 1.9E-21 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS15050 e1e20c81059b8740dfacd657c53f1ada 228 Gene3D G3DSA:3.40.50.2300 2 120 1.2E-38 T 25-04-2017 CLFO_RS15050 e1e20c81059b8740dfacd657c53f1ada 228 SUPERFAMILY SSF46894 123 222 1.7E-26 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS15050 e1e20c81059b8740dfacd657c53f1ada 228 SUPERFAMILY SSF52172 2 118 6.69E-40 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS15050 e1e20c81059b8740dfacd657c53f1ada 228 SMART SM00862 146 221 1.5E-19 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS15920 5a992d6d8b1bccfdbc17378c3be7a08e 317 SUPERFAMILY SSF53187 29 306 1.75E-40 T 25-04-2017 CLFO_RS15920 5a992d6d8b1bccfdbc17378c3be7a08e 317 Gene3D G3DSA:3.40.630.10 30 227 1.5E-20 T 25-04-2017 CLFO_RS15920 5a992d6d8b1bccfdbc17378c3be7a08e 317 PIRSF PIRSF039012 4 317 2.5E-85 T 25-04-2017 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 CLFO_RS15920 5a992d6d8b1bccfdbc17378c3be7a08e 317 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 40 305 3.3E-30 T 25-04-2017 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 CLFO_RS13045 866fede0aaeb681cf6b7161bd6a5c42e 366 Gene3D G3DSA:2.40.50.100 350 364 7.6E-18 T 25-04-2017 CLFO_RS13045 866fede0aaeb681cf6b7161bd6a5c42e 366 Gene3D G3DSA:2.40.50.100 240 283 7.6E-18 T 25-04-2017 CLFO_RS13045 866fede0aaeb681cf6b7161bd6a5c42e 366 SUPERFAMILY SSF52540 4 243 3.92E-87 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13045 866fede0aaeb681cf6b7161bd6a5c42e 366 SUPERFAMILY SSF50331 237 364 5.1E-23 T 25-04-2017 IPR008995 Molybdate/tungstate binding, C-terminal CLFO_RS13045 866fede0aaeb681cf6b7161bd6a5c42e 366 Gene3D G3DSA:3.40.50.300 3 231 8.6E-77 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13045 866fede0aaeb681cf6b7161bd6a5c42e 366 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS13045 866fede0aaeb681cf6b7161bd6a5c42e 366 Pfam PF00005 ABC transporter 21 162 1.6E-30 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS13045 866fede0aaeb681cf6b7161bd6a5c42e 366 Pfam PF08402 TOBE domain 279 356 3.4E-7 T 25-04-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CLFO_RS13045 866fede0aaeb681cf6b7161bd6a5c42e 366 SMART SM00382 29 212 3.1E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS13045 866fede0aaeb681cf6b7161bd6a5c42e 366 Gene3D G3DSA:2.40.50.140 284 341 1.5E-5 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS05490 ef4b1296d82a0a7d13f030b6065c364a 531 SUPERFAMILY SSF52540 84 349 4.18E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05490 ef4b1296d82a0a7d13f030b6065c364a 531 Gene3D G3DSA:3.40.50.300 84 263 1.7E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05490 ef4b1296d82a0a7d13f030b6065c364a 531 Gene3D G3DSA:1.10.8.60 264 330 2.2E-26 T 25-04-2017 CLFO_RS05490 ef4b1296d82a0a7d13f030b6065c364a 531 SUPERFAMILY SSF140990 340 513 7.06E-59 T 25-04-2017 CLFO_RS05490 ef4b1296d82a0a7d13f030b6065c364a 531 ProSitePatterns PS00674 AAA-protein family signature. 225 243 - T 25-04-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CLFO_RS05490 ef4b1296d82a0a7d13f030b6065c364a 531 Pfam PF01434 Peptidase family M41 316 507 1.7E-61 T 25-04-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CLFO_RS05490 ef4b1296d82a0a7d13f030b6065c364a 531 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 125 254 3.4E-46 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS05490 ef4b1296d82a0a7d13f030b6065c364a 531 SMART SM00382 121 257 3.5E-23 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS05490 ef4b1296d82a0a7d13f030b6065c364a 531 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 41 508 3.4E-177 T 25-04-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLFO_RS05490 ef4b1296d82a0a7d13f030b6065c364a 531 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 524 30.977 T 25-04-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLFO_RS11845 50242475b1277c5c70b9646bdc5bc33c 582 Pfam PF01593 Flavin containing amine oxidoreductase 68 574 4.2E-45 T 25-04-2017 IPR002937 Amine oxidase GO:0016491|GO:0055114 CLFO_RS11845 50242475b1277c5c70b9646bdc5bc33c 582 SUPERFAMILY SSF54373 454 523 4.84E-21 T 25-04-2017 CLFO_RS11845 50242475b1277c5c70b9646bdc5bc33c 582 SUPERFAMILY SSF54373 380 422 4.84E-21 T 25-04-2017 CLFO_RS11845 50242475b1277c5c70b9646bdc5bc33c 582 Gene3D G3DSA:3.90.660.10 383 423 7.2E-54 T 25-04-2017 CLFO_RS11845 50242475b1277c5c70b9646bdc5bc33c 582 Gene3D G3DSA:3.90.660.10 89 159 7.2E-54 T 25-04-2017 CLFO_RS11845 50242475b1277c5c70b9646bdc5bc33c 582 Gene3D G3DSA:3.90.660.10 455 514 7.2E-54 T 25-04-2017 CLFO_RS11845 50242475b1277c5c70b9646bdc5bc33c 582 Gene3D G3DSA:3.40.50.720 51 88 6.7E-14 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS11845 50242475b1277c5c70b9646bdc5bc33c 582 Gene3D G3DSA:3.50.50.60 542 577 2.4E-15 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS11845 50242475b1277c5c70b9646bdc5bc33c 582 Gene3D G3DSA:3.50.50.60 254 379 2.4E-15 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS11845 50242475b1277c5c70b9646bdc5bc33c 582 SUPERFAMILY SSF51905 512 576 4.4E-46 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS11845 50242475b1277c5c70b9646bdc5bc33c 582 SUPERFAMILY SSF51905 56 394 4.4E-46 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS10570 2b49377fc06b67aaf4227bffe014c19c 264 Pfam PF07261 Replication initiation and membrane attachment 152 220 1.5E-12 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS10570 2b49377fc06b67aaf4227bffe014c19c 264 Gene3D G3DSA:1.10.10.630 144 219 2.6E-14 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS10570 2b49377fc06b67aaf4227bffe014c19c 264 SUPERFAMILY SSF158499 149 214 1.31E-8 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS10570 2b49377fc06b67aaf4227bffe014c19c 264 Pfam PF13730 Helix-turn-helix domain 23 78 2.5E-7 T 25-04-2017 CLFO_RS10570 2b49377fc06b67aaf4227bffe014c19c 264 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 146 218 3.3E-10 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS03465 456f18546923f75ce2f7ae0eb218eae0 410 Pfam PF02371 Transposase IS116/IS110/IS902 family 274 365 2.1E-20 T 25-04-2017 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CLFO_RS03465 456f18546923f75ce2f7ae0eb218eae0 410 Pfam PF01548 Transposase 10 166 8.2E-18 T 25-04-2017 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CLFO_RS02860 89e815e4f79785018920b208d61d8002 149 Gene3D G3DSA:2.40.50.180 44 78 6.6E-13 T 25-04-2017 CLFO_RS02860 89e815e4f79785018920b208d61d8002 149 Gene3D G3DSA:2.30.30.40 79 132 3.3E-12 T 25-04-2017 CLFO_RS02860 89e815e4f79785018920b208d61d8002 149 SMART SM00260 1 138 2.0E-34 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS02860 89e815e4f79785018920b208d61d8002 149 SUPERFAMILY SSF50341 2 142 1.22E-37 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS02860 89e815e4f79785018920b208d61d8002 149 Pfam PF01584 CheW-like domain 5 140 1.7E-36 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS10790 999ded4f9bec22cb67010cc1dfd57785 589 Pfam PF08388 Group II intron, maturase-specific domain 356 434 2.3E-16 T 25-04-2017 IPR013597 Group II intron, maturase-specific CLFO_RS10790 999ded4f9bec22cb67010cc1dfd57785 589 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 116 336 6.8E-44 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS10790 999ded4f9bec22cb67010cc1dfd57785 589 SUPERFAMILY SSF56672 73 385 7.23E-51 T 25-04-2017 CLFO_RS10790 999ded4f9bec22cb67010cc1dfd57785 589 Pfam PF13655 N-terminal domain of reverse transcriptase 16 97 1.5E-29 T 25-04-2017 IPR025960 Reverse transcriptase, N-terminal domain CLFO_RS10790 999ded4f9bec22cb67010cc1dfd57785 589 Pfam PF01844 HNH endonuclease 513 559 1.3E-9 T 25-04-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CLFO_RS10790 999ded4f9bec22cb67010cc1dfd57785 589 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 60 419 3.3E-110 T 25-04-2017 IPR030931 Group II intron reverse transcriptase/maturase CLFO_RS10790 999ded4f9bec22cb67010cc1dfd57785 589 SMART SM00507 500 555 2.0E-13 T 25-04-2017 IPR003615 HNH nuclease CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 ProSitePatterns PS00012 Phosphopantetheine attachment site. 381 396 - T 25-04-2017 IPR006162 Phosphopantetheine attachment site CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 863 974 1.6E-12 T 25-04-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 Gene3D G3DSA:3.40.47.10 489 746 1.8E-90 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1581 1767 2.2E-50 T 25-04-2017 CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 SUPERFAMILY SSF53901 486 851 1.67E-86 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 Pfam PF08659 KR domain 1581 1766 4.8E-59 T 25-04-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 SMART SM00825 Beta-ketoacyl synthase 489 913 3.9E-180 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 Gene3D G3DSA:3.40.50.720 1579 1787 3.7E-55 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 Pfam PF00550 Phosphopantetheine attachment site 374 421 4.1E-9 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 SMART SM00826 1105 1271 1.6E-15 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 Gene3D G3DSA:3.40.47.10 747 912 1.3E-52 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 Gene3D G3DSA:1.10.1200.10 348 439 1.2E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 647 663 - T 25-04-2017 IPR018201 Beta-ketoacyl synthase, active site CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 Pfam PF14765 Polyketide synthase dehydratase 1105 1391 1.4E-60 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 Pfam PF14765 Polyketide synthase dehydratase 61 310 1.0E-30 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 SUPERFAMILY SSF51735 1577 1806 1.38E-40 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 742 858 1.9E-38 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 SUPERFAMILY SSF47336 351 427 1.7E-10 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 487 734 3.7E-78 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04830 f8e1bbb535a92f2cf454b949ace50f15 1882 SMART SM00823 Phosphopantetheine attachment site 355 426 3.9E-4 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS20650 6312e6d2f4e8880481fc365eabb7dbe4 392 Pfam PF00557 Metallopeptidase family M24 168 376 8.9E-34 T 25-04-2017 IPR000994 Peptidase M24, structural domain CLFO_RS20650 6312e6d2f4e8880481fc365eabb7dbe4 392 SUPERFAMILY SSF53092 4 158 4.06E-38 T 25-04-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLFO_RS20650 6312e6d2f4e8880481fc365eabb7dbe4 392 SUPERFAMILY SSF55920 160 391 1.44E-57 T 25-04-2017 IPR000994 Peptidase M24, structural domain CLFO_RS20650 6312e6d2f4e8880481fc365eabb7dbe4 392 Pfam PF01321 Creatinase/Prolidase N-terminal domain 15 160 1.5E-20 T 25-04-2017 IPR000587 Creatinase, N-terminal GO:0016787 CLFO_RS20650 6312e6d2f4e8880481fc365eabb7dbe4 392 Gene3D G3DSA:3.40.350.10 3 158 1.2E-37 T 25-04-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLFO_RS20650 6312e6d2f4e8880481fc365eabb7dbe4 392 Gene3D G3DSA:3.90.230.10 160 389 9.3E-47 T 25-04-2017 IPR000994 Peptidase M24, structural domain CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 SMART SM00091 23 90 4.2E-4 T 25-04-2017 IPR000014 PAS domain CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 Gene3D G3DSA:3.40.50.300 145 320 3.7E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 Gene3D G3DSA:1.10.10.60 420 461 4.1E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 SUPERFAMILY SSF55785 24 87 7.85E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 75 5.6E-6 T 25-04-2017 IPR000014 PAS domain CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 Pfam PF00989 PAS fold 24 72 1.4E-6 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 SUPERFAMILY SSF46689 419 461 2.6E-7 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 SUPERFAMILY SSF52540 148 391 6.66E-71 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 SMART SM00382 168 305 1.2E-6 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 Gene3D G3DSA:3.30.450.20 25 75 6.0E-8 T 25-04-2017 CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 Gene3D G3DSA:1.10.8.60 321 395 4.6E-23 T 25-04-2017 CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 Pfam PF00158 Sigma-54 interaction domain 148 314 2.7E-72 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS03280 b5c864e121471a61ed55edd9701621e3 463 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS07485 d2ae423af63ebaf80e0932eb1504d3e4 67 ProDom PD019268 UVIB BACTERIOCIN BHLA PLASMID ANTIBIOTIC HOLIN-LIKE PRECURSOR ANTIMICROBIAL SIGNAL PROPHAGE-DERIVED 1 67 3.0E-14 T 25-04-2017 IPR024405 Prophage protein BhlA/UviB CLFO_RS07485 d2ae423af63ebaf80e0932eb1504d3e4 67 Pfam PF10960 BhlA holin family 1 63 2.2E-21 T 25-04-2017 IPR024405 Prophage protein BhlA/UviB CLFO_RS11120 c76deac5bd2e409cb0c36c14f7a1fff7 154 Pfam PF02050 Flagellar FliJ protein 26 146 5.7E-12 T 25-04-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CLFO_RS11120 c76deac5bd2e409cb0c36c14f7a1fff7 154 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 10 147 1.4E-16 T 25-04-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CLFO_RS17565 a28d8adc3a4e428c8e9490361057b286 355 SUPERFAMILY SSF109604 119 289 2.93E-36 T 25-04-2017 CLFO_RS17565 a28d8adc3a4e428c8e9490361057b286 355 Pfam PF01966 HD domain 127 249 1.5E-18 T 25-04-2017 IPR006674 HD domain CLFO_RS17565 a28d8adc3a4e428c8e9490361057b286 355 TIGRFAM TIGR00277 HDIG: HDIG domain 125 218 2.6E-7 T 25-04-2017 IPR006675 HDIG domain CLFO_RS17565 a28d8adc3a4e428c8e9490361057b286 355 SMART SM00471 123 259 1.2E-8 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS17565 a28d8adc3a4e428c8e9490361057b286 355 Gene3D G3DSA:1.10.3210.10 123 264 1.4E-20 T 25-04-2017 IPR006674 HD domain CLFO_RS10640 3b7f6c693c2986130303a27f25952a46 411 Gene3D G3DSA:1.10.3210.10 183 320 1.1E-13 T 25-04-2017 IPR006674 HD domain CLFO_RS10640 3b7f6c693c2986130303a27f25952a46 411 SUPERFAMILY SSF109604 185 329 1.4E-15 T 25-04-2017 CLFO_RS10640 3b7f6c693c2986130303a27f25952a46 411 Pfam PF13487 HD domain 242 301 1.2E-14 T 25-04-2017 CLFO_RS06750 d6ecca1fdb78fcf4ace6fc35ec105e94 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 325 1.5E-35 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS01290 3d93813e9448fd5b0f29c8f34a34e930 225 SMART SM00862 147 222 2.8E-26 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS01290 3d93813e9448fd5b0f29c8f34a34e930 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 222 2.4E-26 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS01290 3d93813e9448fd5b0f29c8f34a34e930 225 SUPERFAMILY SSF52172 1 122 1.42E-40 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS01290 3d93813e9448fd5b0f29c8f34a34e930 225 Pfam PF00072 Response regulator receiver domain 3 112 2.4E-30 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS01290 3d93813e9448fd5b0f29c8f34a34e930 225 Gene3D G3DSA:1.10.10.10 124 224 3.7E-32 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS01290 3d93813e9448fd5b0f29c8f34a34e930 225 SUPERFAMILY SSF46894 123 223 2.55E-28 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS01290 3d93813e9448fd5b0f29c8f34a34e930 225 Gene3D G3DSA:3.40.50.2300 1 121 2.1E-40 T 25-04-2017 CLFO_RS01290 3d93813e9448fd5b0f29c8f34a34e930 225 SMART SM00448 1 111 3.3E-44 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13400 10b3bfad3d58119b5dd721cdef96abc2 354 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 83 158 1.0E-11 T 25-04-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLFO_RS13400 10b3bfad3d58119b5dd721cdef96abc2 354 Pfam PF00589 Phage integrase family 178 337 4.4E-41 T 25-04-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS13400 10b3bfad3d58119b5dd721cdef96abc2 354 SUPERFAMILY SSF56349 90 339 5.0E-54 T 25-04-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLFO_RS13400 10b3bfad3d58119b5dd721cdef96abc2 354 Gene3D G3DSA:1.10.150.130 92 161 4.3E-6 T 25-04-2017 IPR023109 Integrase/recombinase, N-terminal CLFO_RS13400 10b3bfad3d58119b5dd721cdef96abc2 354 Gene3D G3DSA:1.10.443.10 177 342 1.4E-47 T 25-04-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS00455 4fc9acee8d81990b021f466a354aa187 178 Pfam PF13662 Toprim domain 3 69 1.3E-8 T 25-04-2017 IPR006171 Toprim domain CLFO_RS00455 4fc9acee8d81990b021f466a354aa187 178 Hamap MF_01469 Ribonuclease M5 [rnmV]. 1 175 31.003 T 25-04-2017 IPR004466 Ribonuclease M5 GO:0043822 CLFO_RS00455 4fc9acee8d81990b021f466a354aa187 178 SMART SM00493 3 76 1.6E-14 T 25-04-2017 IPR006171 Toprim domain CLFO_RS00455 4fc9acee8d81990b021f466a354aa187 178 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 174 3.3E-48 T 25-04-2017 IPR004466 Ribonuclease M5 GO:0043822 CLFO_RS00455 4fc9acee8d81990b021f466a354aa187 178 Pfam PF13331 Domain of unknown function (DUF4093) 89 173 2.8E-27 T 25-04-2017 IPR025156 Ribonuclease M5, C-terminal domain CLFO_RS00455 4fc9acee8d81990b021f466a354aa187 178 Gene3D G3DSA:3.40.1360.20 2 121 1.0E-38 T 25-04-2017 CLFO_RS00455 4fc9acee8d81990b021f466a354aa187 178 SUPERFAMILY SSF110455 2 114 9.94E-34 T 25-04-2017 CLFO_RS07615 423c992708acc3d139c843c9dded4bd1 56 Pfam PF02805 Metal binding domain of Ada 24 56 3.9E-7 T 25-04-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CLFO_RS07615 423c992708acc3d139c843c9dded4bd1 56 Gene3D G3DSA:3.40.10.10 20 56 2.7E-11 T 25-04-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CLFO_RS07615 423c992708acc3d139c843c9dded4bd1 56 SUPERFAMILY SSF57884 19 56 2.22E-10 T 25-04-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CLFO_RS00580 f3e54ac119337964fd88bdf058339a3e 487 SUPERFAMILY SSF101386 232 334 9.72E-24 T 25-04-2017 CLFO_RS00580 f3e54ac119337964fd88bdf058339a3e 487 SUPERFAMILY SSF101386 364 463 8.6E-26 T 25-04-2017 CLFO_RS00580 f3e54ac119337964fd88bdf058339a3e 487 Gene3D G3DSA:3.40.1010.10 3 113 7.1E-15 T 25-04-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00580 f3e54ac119337964fd88bdf058339a3e 487 SUPERFAMILY SSF53790 3 258 1.6E-29 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00580 f3e54ac119337964fd88bdf058339a3e 487 PIRSF PIRSF002845 1 487 1.5E-199 T 25-04-2017 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted CLFO_RS00580 f3e54ac119337964fd88bdf058339a3e 487 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 256 329 3.3E-28 T 25-04-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLFO_RS00580 f3e54ac119337964fd88bdf058339a3e 487 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 394 453 2.6E-9 T 25-04-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLFO_RS00580 f3e54ac119337964fd88bdf058339a3e 487 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 205 2.6E-25 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00580 f3e54ac119337964fd88bdf058339a3e 487 TIGRFAM TIGR00444 mazG: MazG family protein 240 484 2.5E-91 T 25-04-2017 IPR011551 NTP pyrophosphohydrolase MazG CLFO_RS00580 f3e54ac119337964fd88bdf058339a3e 487 Gene3D G3DSA:1.10.287.1080 360 448 2.5E-14 T 25-04-2017 CLFO_RS00580 f3e54ac119337964fd88bdf058339a3e 487 Gene3D G3DSA:1.10.287.1080 248 301 2.8E-8 T 25-04-2017 CLFO_RS05520 4a05f8248760fd94a5491b68ea01eb9f 266 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 34 103 1.1E-6 T 25-04-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CLFO_RS05520 4a05f8248760fd94a5491b68ea01eb9f 266 SUPERFAMILY SSF75217 96 262 2.81E-43 T 25-04-2017 IPR029028 Alpha/beta knot methyltransferases CLFO_RS05520 4a05f8248760fd94a5491b68ea01eb9f 266 SUPERFAMILY SSF55315 5 105 1.05E-20 T 25-04-2017 IPR029064 50S ribosomal protein L30e-like CLFO_RS05520 4a05f8248760fd94a5491b68ea01eb9f 266 Pfam PF00588 SpoU rRNA Methylase family 119 259 3.0E-39 T 25-04-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CLFO_RS05520 4a05f8248760fd94a5491b68ea01eb9f 266 Gene3D G3DSA:3.40.1280.10 114 263 4.9E-48 T 25-04-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLFO_RS05520 4a05f8248760fd94a5491b68ea01eb9f 266 Gene3D G3DSA:3.30.1330.30 5 104 3.4E-24 T 25-04-2017 IPR029064 50S ribosomal protein L30e-like CLFO_RS05520 4a05f8248760fd94a5491b68ea01eb9f 266 SMART SM00967 33 108 4.9E-9 T 25-04-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CLFO_RS01635 99f965da5eccfffb3500d2c2e06c3f26 283 Gene3D G3DSA:3.20.10.10 117 271 1.2E-32 T 25-04-2017 CLFO_RS01635 99f965da5eccfffb3500d2c2e06c3f26 283 Pfam PF01063 Amino-transferase class IV 36 247 7.8E-50 T 25-04-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CLFO_RS01635 99f965da5eccfffb3500d2c2e06c3f26 283 Gene3D G3DSA:3.30.470.10 9 97 2.1E-16 T 25-04-2017 CLFO_RS01635 99f965da5eccfffb3500d2c2e06c3f26 283 ProSitePatterns PS00770 Aminotransferases class-IV signature. 174 202 - T 25-04-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CLFO_RS01635 99f965da5eccfffb3500d2c2e06c3f26 283 SUPERFAMILY SSF56752 16 266 7.06E-52 T 25-04-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 TIGRFAM TIGR00763 lon: endopeptidase La 14 775 0.0 T 25-04-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 Gene3D G3DSA:1.10.8.60 505 588 1.6E-34 T 25-04-2017 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 PIRSF PIRSF001174 1 779 0.0 T 25-04-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 SMART SM00464 12 206 3.5E-65 T 25-04-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 726 3.1E-54 T 25-04-2017 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 599 615 3.1E-54 T 25-04-2017 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 360 379 3.1E-54 T 25-04-2017 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 730 748 3.1E-54 T 25-04-2017 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 3.1E-54 T 25-04-2017 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 680 688 - T 25-04-2017 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 Gene3D G3DSA:3.40.50.300 311 504 2.0E-35 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 SUPERFAMILY SSF52540 316 591 3.8E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 574 776 1.2E-96 T 25-04-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 SUPERFAMILY SSF54211 599 774 1.29E-56 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 SUPERFAMILY SSF88697 12 204 1.32E-44 T 25-04-2017 IPR015947 PUA-like domain CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 SMART SM00382 352 497 2.5E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 356 493 1.2E-23 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 12 204 1.1E-39 T 25-04-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 Hamap MF_01973 Lon protease [lon]. 13 776 72.164 T 25-04-2017 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CLFO_RS03045 96dc3f4bb4ad00616271a899e85339fe 783 Gene3D G3DSA:3.30.230.10 593 775 2.9E-73 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 Pfam PF00512 His Kinase A (phospho-acceptor) domain 440 513 3.1E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 SMART SM00388 439 513 5.1E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 Pfam PF12860 PAS fold 309 417 3.1E-7 T 25-04-2017 CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 Pfam PF17159 Membrane-associated sensor domain 32 255 9.6E-79 T 25-04-2017 IPR033425 Membrane-associated sensor domain MASE3 CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 Gene3D G3DSA:1.10.287.130 431 500 1.1E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 SMART SM00387 559 671 1.5E-36 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 Gene3D G3DSA:3.30.565.10 501 670 4.0E-44 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 560 669 1.1E-22 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 SUPERFAMILY SSF55785 287 343 3.49E-8 T 25-04-2017 IPR000014 PAS domain CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 Gene3D G3DSA:3.30.450.20 287 349 1.1E-9 T 25-04-2017 CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 624 5.0E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 668 5.0E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 610 5.0E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 649 5.0E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 SUPERFAMILY SSF47384 427 513 2.94E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS16105 92db0310f3dc59109633c21e27ac3827 705 SUPERFAMILY SSF55874 502 672 2.23E-43 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS07620 12fdb00c412015712b67640dc60290eb 138 Gene3D G3DSA:2.60.120.460 1 138 2.6E-46 T 25-04-2017 IPR001602 Uncharacterised protein family UPF0047 CLFO_RS07620 12fdb00c412015712b67640dc60290eb 138 Pfam PF01894 Uncharacterised protein family UPF0047 20 135 1.5E-34 T 25-04-2017 IPR001602 Uncharacterised protein family UPF0047 CLFO_RS07620 12fdb00c412015712b67640dc60290eb 138 PIRSF PIRSF004681 1 138 2.0E-38 T 25-04-2017 IPR001602 Uncharacterised protein family UPF0047 CLFO_RS07620 12fdb00c412015712b67640dc60290eb 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 14 138 5.9E-33 T 25-04-2017 IPR001602 Uncharacterised protein family UPF0047 CLFO_RS07620 12fdb00c412015712b67640dc60290eb 138 SUPERFAMILY SSF111038 1 138 7.72E-45 T 25-04-2017 IPR001602 Uncharacterised protein family UPF0047 CLFO_RS17845 671a003f535a46aa6db2e106b72a8f75 314 SUPERFAMILY SSF52922 179 310 2.75E-39 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS17845 671a003f535a46aa6db2e106b72a8f75 314 SMART SM00861 5 170 1.1E-62 T 25-04-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CLFO_RS17845 671a003f535a46aa6db2e106b72a8f75 314 ProSitePatterns PS00802 Transketolase signature 2. 113 129 - T 25-04-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLFO_RS17845 671a003f535a46aa6db2e106b72a8f75 314 Pfam PF02780 Transketolase, C-terminal domain 182 302 8.0E-39 T 25-04-2017 IPR033248 Transketolase, C-terminal domain CLFO_RS17845 671a003f535a46aa6db2e106b72a8f75 314 SUPERFAMILY SSF52518 2 172 1.72E-61 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS17845 671a003f535a46aa6db2e106b72a8f75 314 Gene3D G3DSA:3.40.50.970 2 182 2.2E-66 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS17845 671a003f535a46aa6db2e106b72a8f75 314 Gene3D G3DSA:3.40.50.920 183 310 5.6E-43 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS17845 671a003f535a46aa6db2e106b72a8f75 314 Pfam PF02779 Transketolase, pyrimidine binding domain 3 168 8.8E-42 T 25-04-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CLFO_RS14970 2cbe973763f1272afccba90dfba1f7e4 252 SUPERFAMILY SSF52540 1 240 4.75E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14970 2cbe973763f1272afccba90dfba1f7e4 252 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS14970 2cbe973763f1272afccba90dfba1f7e4 252 Gene3D G3DSA:3.40.50.300 1 218 2.7E-63 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14970 2cbe973763f1272afccba90dfba1f7e4 252 Pfam PF00005 ABC transporter 22 161 7.0E-28 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS14970 2cbe973763f1272afccba90dfba1f7e4 252 SMART SM00382 31 212 2.2E-13 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12050 6b0f4d9bc870a50ea4d5e56c80af85e2 370 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 8 342 2.1E-79 T 25-04-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CLFO_RS12050 6b0f4d9bc870a50ea4d5e56c80af85e2 370 SUPERFAMILY SSF51726 5 345 1.74E-68 T 25-04-2017 CLFO_RS12050 6b0f4d9bc870a50ea4d5e56c80af85e2 370 Gene3D G3DSA:3.20.20.210 3 344 8.2E-68 T 25-04-2017 CLFO_RS14555 6dea235ce887d78b993d8304fd1d1ce4 93 SMART SM00858 11 87 4.3E-13 T 25-04-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 CLFO_RS14555 6dea235ce887d78b993d8304fd1d1ce4 93 Pfam PF08666 SAF domain 11 86 3.6E-13 T 25-04-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 CLFO_RS06590 5495598dc69e745212aae7092ead579c 266 Hamap MF_00668 6-carboxyhexanoate--CoA ligase [bioW]. 5 248 48.16 T 25-04-2017 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 CLFO_RS06590 5495598dc69e745212aae7092ead579c 266 ProDom PD017229 LIGASE SYNTHASE BIOTIN MAGNESIUM PIMELOYL-COA 6-CARBOXYHEXANOATE--COA BIOSYNTHESIS 6-CARBOXYHEXANOATE-COA BIOW COA 2 220 1.0E-43 T 25-04-2017 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 CLFO_RS06590 5495598dc69e745212aae7092ead579c 266 TIGRFAM TIGR01204 bioW: 6-carboxyhexanoate--CoA ligase 15 247 1.3E-73 T 25-04-2017 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 CLFO_RS06590 5495598dc69e745212aae7092ead579c 266 Pfam PF03744 6-carboxyhexanoate--CoA ligase 6 247 1.5E-86 T 25-04-2017 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 Pfam PF00702 haloacid dehalogenase-like hydrolase 508 725 2.5E-45 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 Gene3D G3DSA:3.40.50.1000 483 525 2.2E-55 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 Gene3D G3DSA:3.40.50.1000 639 780 2.2E-55 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 SUPERFAMILY SSF55008 79 149 3.67E-21 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 Gene3D G3DSA:2.70.150.10 151 181 1.6E-34 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 Gene3D G3DSA:2.70.150.10 286 392 1.6E-34 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 Gene3D G3DSA:3.30.70.100 78 147 3.3E-23 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 Gene3D G3DSA:3.30.70.100 3 73 5.6E-21 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 SUPERFAMILY SSF81665 392 506 8.11E-8 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 SUPERFAMILY SSF81665 760 787 8.11E-8 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 SUPERFAMILY SSF81665 261 295 8.11E-8 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 Pfam PF00403 Heavy-metal-associated domain 85 146 2.6E-16 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 Pfam PF00403 Heavy-metal-associated domain 12 71 7.4E-11 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 PRINTS PR00942 Copper-transporting ATPase 1 signature 171 192 1.0E-13 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 PRINTS PR00942 Copper-transporting ATPase 1 signature 106 127 1.0E-13 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 PRINTS PR00942 Copper-transporting ATPase 1 signature 9 34 1.0E-13 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 PRINTS PR00942 Copper-transporting ATPase 1 signature 35 58 1.0E-13 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 ProSitePatterns PS01047 Heavy-metal-associated domain. 14 43 - T 25-04-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 457 799 1.9E-67 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 264 427 1.8E-23 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 514 520 - T 25-04-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 Pfam PF00122 E1-E2 ATPase 263 503 2.7E-65 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 231 813 1.6E-187 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 SUPERFAMILY SSF56784 511 530 1.32E-62 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 SUPERFAMILY SSF56784 569 811 1.32E-62 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 Gene3D G3DSA:3.40.1110.10 526 638 7.0E-28 T 25-04-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 83 147 8.5E-12 T 25-04-2017 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 9 73 1.2E-12 T 25-04-2017 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 SUPERFAMILY SSF55008 3 73 3.93E-19 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 658 668 3.4E-29 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 341 355 3.4E-29 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 647 3.4E-29 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 526 3.4E-29 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 711 730 3.4E-29 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 734 746 3.4E-29 T 25-04-2017 CLFO_RS17735 25ecc166dd9e5171b8410f83e3035968 825 SUPERFAMILY SSF81653 295 391 4.18E-28 T 25-04-2017 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 3.1E-14 T 25-04-2017 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 3.1E-14 T 25-04-2017 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 3.1E-14 T 25-04-2017 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 2 186 3.3E-67 T 25-04-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 Gene3D G3DSA:3.40.50.880 2 186 4.9E-65 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 SUPERFAMILY SSF52317 2 187 1.71E-54 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.3E-35 T 25-04-2017 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.3E-35 T 25-04-2017 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.3E-35 T 25-04-2017 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.3E-35 T 25-04-2017 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.3E-35 T 25-04-2017 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.3E-35 T 25-04-2017 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.4E-6 T 25-04-2017 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.4E-6 T 25-04-2017 CLFO_RS02250 1596d47893427737db7656b67f3d8f79 189 Pfam PF00117 Glutamine amidotransferase class-I 4 185 2.0E-51 T 25-04-2017 IPR017926 Glutamine amidotransferase CLFO_RS09910 250898d5ba6685cef12d208a49342944 389 Gene3D G3DSA:2.40.50.100 198 229 5.7E-15 T 25-04-2017 CLFO_RS09910 250898d5ba6685cef12d208a49342944 389 Gene3D G3DSA:2.40.50.100 67 94 5.7E-15 T 25-04-2017 CLFO_RS09910 250898d5ba6685cef12d208a49342944 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 383 7.6E-62 T 25-04-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CLFO_RS09910 250898d5ba6685cef12d208a49342944 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 302 1.1E-25 T 25-04-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLFO_RS09910 250898d5ba6685cef12d208a49342944 389 SUPERFAMILY SSF111369 50 116 1.7E-8 T 25-04-2017 CLFO_RS09910 250898d5ba6685cef12d208a49342944 389 SUPERFAMILY SSF111369 122 308 1.16E-19 T 25-04-2017 CLFO_RS21405 20582d212b29448f2b5d5fd76ad0d239 238 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 215 28.419 T 25-04-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CLFO_RS21405 20582d212b29448f2b5d5fd76ad0d239 238 PIRSF PIRSF003078 2 221 5.6E-56 T 25-04-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CLFO_RS21405 20582d212b29448f2b5d5fd76ad0d239 238 Pfam PF02527 rRNA small subunit methyltransferase G 22 199 1.0E-54 T 25-04-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CLFO_RS21405 20582d212b29448f2b5d5fd76ad0d239 238 SUPERFAMILY SSF53335 7 238 2.43E-50 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS21405 20582d212b29448f2b5d5fd76ad0d239 238 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 210 2.6E-56 T 25-04-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CLFO_RS21405 20582d212b29448f2b5d5fd76ad0d239 238 Gene3D G3DSA:3.40.50.150 4 238 2.8E-77 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS01920 ac1c651ba90d3fc8f30533df69c71cd3 294 Pfam PF07934 8-oxoguanine DNA glycosylase, N-terminal domain 14 119 1.1E-26 T 25-04-2017 IPR012904 8-oxoguanine DNA glycosylase, N-terminal GO:0003684|GO:0006289|GO:0008534 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357|Reactome: R-HSA-5649702 CLFO_RS01920 ac1c651ba90d3fc8f30533df69c71cd3 294 SMART SM00478 124 287 8.3E-10 T 25-04-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CLFO_RS01920 ac1c651ba90d3fc8f30533df69c71cd3 294 SUPERFAMILY SSF55945 12 113 1.24E-23 T 25-04-2017 CLFO_RS01920 ac1c651ba90d3fc8f30533df69c71cd3 294 Gene3D G3DSA:1.10.1670.10 227 285 6.9E-15 T 25-04-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CLFO_RS01920 ac1c651ba90d3fc8f30533df69c71cd3 294 Gene3D G3DSA:3.30.310.40 21 69 1.5E-9 T 25-04-2017 CLFO_RS01920 ac1c651ba90d3fc8f30533df69c71cd3 294 SUPERFAMILY SSF48150 114 287 8.48E-39 T 25-04-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CLFO_RS01920 ac1c651ba90d3fc8f30533df69c71cd3 294 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 120 267 1.2E-15 T 25-04-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CLFO_RS01920 ac1c651ba90d3fc8f30533df69c71cd3 294 Gene3D G3DSA:1.10.340.30 114 226 1.1E-37 T 25-04-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 SUPERFAMILY SSF55190 4 106 1.7E-25 T 25-04-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 SUPERFAMILY SSF52374 109 445 4.22E-98 T 25-04-2017 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 Pfam PF00750 tRNA synthetases class I (R) 95 437 2.6E-99 T 25-04-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 PRINTS PR01038 Arginyl-tRNA synthetase signature 154 167 3.7E-23 T 25-04-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 PRINTS PR01038 Arginyl-tRNA synthetase signature 298 319 3.7E-23 T 25-04-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 PRINTS PR01038 Arginyl-tRNA synthetase signature 115 130 3.7E-23 T 25-04-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 PRINTS PR01038 Arginyl-tRNA synthetase signature 130 146 3.7E-23 T 25-04-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 Hamap MF_00123 Arginine--tRNA ligase [argS]. 2 566 26.127 T 25-04-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 Gene3D G3DSA:3.40.50.620 109 444 1.5E-110 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 SMART SM01016 2 85 2.2E-24 T 25-04-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 85 6.0E-19 T 25-04-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 123 134 - T 25-04-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 5 566 1.6E-163 T 25-04-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 Gene3D G3DSA:3.30.1360.70 4 102 1.8E-30 T 25-04-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 SUPERFAMILY SSF47323 447 566 4.25E-35 T 25-04-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 Pfam PF05746 DALR anticodon binding domain 451 566 2.0E-34 T 25-04-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 SMART SM00836 451 566 8.8E-47 T 25-04-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CLFO_RS05830 e82bc24b53d8147de44f2e84d0e4820c 566 Gene3D G3DSA:1.10.730.10 445 566 8.7E-40 T 25-04-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS18705 56c2b776fd0f4cacdd9a2b2facc45154 249 Pfam PF13476 AAA domain 36 86 2.6E-9 T 25-04-2017 CLFO_RS18705 56c2b776fd0f4cacdd9a2b2facc45154 249 Gene3D G3DSA:3.40.50.300 35 72 3.0E-10 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18705 56c2b776fd0f4cacdd9a2b2facc45154 249 SMART SM00382 42 218 7.9E-9 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS18705 56c2b776fd0f4cacdd9a2b2facc45154 249 SUPERFAMILY SSF52540 33 226 3.56E-23 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18705 56c2b776fd0f4cacdd9a2b2facc45154 249 Pfam PF13175 AAA ATPase domain 150 204 1.7E-8 T 25-04-2017 CLFO_RS18705 56c2b776fd0f4cacdd9a2b2facc45154 249 Gene3D G3DSA:3.40.50.300 140 218 6.9E-16 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05745 5e9fb9c43841636bafb5c9fb98c36b8f 861 Gene3D G3DSA:3.40.50.300 554 681 8.6E-12 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05745 5e9fb9c43841636bafb5c9fb98c36b8f 861 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 332 702 8.2E-46 T 25-04-2017 IPR006474 Helicase Cas3, CRISPR-associated, core CLFO_RS05745 5e9fb9c43841636bafb5c9fb98c36b8f 861 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 33 255 8.4E-24 T 25-04-2017 IPR006483 CRISPR-associated Cas3-HD domain CLFO_RS05745 5e9fb9c43841636bafb5c9fb98c36b8f 861 SUPERFAMILY SSF52540 329 381 9.82E-28 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05745 5e9fb9c43841636bafb5c9fb98c36b8f 861 SUPERFAMILY SSF52540 415 678 9.82E-28 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05745 5e9fb9c43841636bafb5c9fb98c36b8f 861 Gene3D G3DSA:3.40.50.300 328 508 1.1E-17 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05745 5e9fb9c43841636bafb5c9fb98c36b8f 861 SMART SM00487 298 535 8.2E-5 T 25-04-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLFO_RS05745 5e9fb9c43841636bafb5c9fb98c36b8f 861 Pfam PF00270 DEAD/DEAH box helicase 331 508 2.8E-10 T 25-04-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLFO_RS05745 5e9fb9c43841636bafb5c9fb98c36b8f 861 Pfam PF00271 Helicase conserved C-terminal domain 558 640 2.5E-6 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS05745 5e9fb9c43841636bafb5c9fb98c36b8f 861 SMART SM00490 590 665 0.0039 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS02375 bdcb77314edd163bedf3ee9738f9165f 173 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 112 164 3.3E-11 T 25-04-2017 IPR019264 Domain of unknown function DUF2179 CLFO_RS02375 bdcb77314edd163bedf3ee9738f9165f 173 Hamap MF_01515 UPF0316 protein . 4 172 29.514 T 25-04-2017 IPR022930 Protein of unknown function UPF0316 CLFO_RS21240 3040a69b6c1e047161d29729a23071b3 539 Gene3D G3DSA:3.90.580.10 181 227 1.5E-5 T 25-04-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLFO_RS21240 3040a69b6c1e047161d29729a23071b3 539 SUPERFAMILY SSF57783 176 226 9.78E-6 T 25-04-2017 CLFO_RS21240 3040a69b6c1e047161d29729a23071b3 539 SUPERFAMILY SSF56731 354 432 7.32E-9 T 25-04-2017 CLFO_RS21240 3040a69b6c1e047161d29729a23071b3 539 SUPERFAMILY SSF56731 272 324 7.32E-9 T 25-04-2017 CLFO_RS21240 3040a69b6c1e047161d29729a23071b3 539 Pfam PF08275 DNA primase catalytic core, N-terminal domain 268 339 9.4E-6 T 25-04-2017 IPR013264 DNA primase, catalytic core, N-terminal CLFO_RS21240 3040a69b6c1e047161d29729a23071b3 539 Gene3D G3DSA:3.90.980.10 269 334 1.8E-6 T 25-04-2017 IPR013264 DNA primase, catalytic core, N-terminal CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 191 308 7.7E-23 T 25-04-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 SUPERFAMILY SSF54665 166 330 1.24E-41 T 25-04-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Gene3D G3DSA:3.30.365.10 459 533 3.6E-29 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Gene3D G3DSA:3.30.365.10 297 363 3.6E-29 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 SUPERFAMILY SSF47741 81 190 1.14E-33 T 25-04-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 25-04-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Gene3D G3DSA:3.30.365.10 631 775 3.5E-20 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 SUPERFAMILY SSF56003 300 907 7.59E-143 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 SUPERFAMILY SSF54292 5 89 5.77E-21 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Gene3D G3DSA:3.30.365.10 365 456 2.7E-20 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Gene3D G3DSA:3.10.20.30 5 76 3.4E-23 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 60 2.6E-6 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Gene3D G3DSA:1.10.150.120 77 177 2.1E-33 T 25-04-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Gene3D G3DSA:3.30.365.10 776 906 7.6E-50 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Gene3D G3DSA:3.30.365.10 535 630 7.6E-50 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 SMART SM01008 190 308 3.5E-36 T 25-04-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Pfam PF01799 [2Fe-2S] binding domain 75 149 6.0E-26 T 25-04-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 325 845 1.1E-128 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS05870 01ea74becb670e74ab86224aa8cccbf2 915 Gene3D G3DSA:3.90.1170.50 178 296 5.0E-37 T 25-04-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLFO_RS16010 3657f2b4ba76246522ea99e155dcbf34 329 SUPERFAMILY SSF46689 280 328 8.96E-12 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16010 3657f2b4ba76246522ea99e155dcbf34 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 280 322 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS16010 3657f2b4ba76246522ea99e155dcbf34 329 Pfam PF12833 Helix-turn-helix domain 249 327 4.3E-21 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS16010 3657f2b4ba76246522ea99e155dcbf34 329 SUPERFAMILY SSF46689 227 276 4.48E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16010 3657f2b4ba76246522ea99e155dcbf34 329 Gene3D G3DSA:1.10.10.60 280 327 5.8E-15 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16010 3657f2b4ba76246522ea99e155dcbf34 329 Gene3D G3DSA:1.10.10.60 224 279 2.1E-8 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16010 3657f2b4ba76246522ea99e155dcbf34 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 310 5.6E-7 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS16010 3657f2b4ba76246522ea99e155dcbf34 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 310 326 5.6E-7 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS16010 3657f2b4ba76246522ea99e155dcbf34 329 SMART SM00342 243 326 1.8E-28 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS12740 a71ba22f28a1f539c6d85dc3ff682455 114 SMART SM00418 3 77 9.5E-23 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS12740 a71ba22f28a1f539c6d85dc3ff682455 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 35 4.2E-17 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS12740 a71ba22f28a1f539c6d85dc3ff682455 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 4.2E-17 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS12740 a71ba22f28a1f539c6d85dc3ff682455 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 4.2E-17 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS12740 a71ba22f28a1f539c6d85dc3ff682455 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 4.2E-17 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS12740 a71ba22f28a1f539c6d85dc3ff682455 114 SUPERFAMILY SSF46785 1 94 1.92E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12740 a71ba22f28a1f539c6d85dc3ff682455 114 Gene3D G3DSA:1.10.10.10 2 81 3.1E-26 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12740 a71ba22f28a1f539c6d85dc3ff682455 114 Pfam PF01022 Bacterial regulatory protein, arsR family 10 54 6.5E-16 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS01715 a2cefbc277732469be92c305a9a13dcb 426 SUPERFAMILY SSF81340 5 397 2.09E-68 T 25-04-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CLFO_RS01715 a2cefbc277732469be92c305a9a13dcb 426 PRINTS PR00762 Chloride channel signature 152 171 1.4E-5 T 25-04-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CLFO_RS01715 a2cefbc277732469be92c305a9a13dcb 426 PRINTS PR00762 Chloride channel signature 346 362 1.4E-5 T 25-04-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CLFO_RS01715 a2cefbc277732469be92c305a9a13dcb 426 PRINTS PR00762 Chloride channel signature 97 116 1.4E-5 T 25-04-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CLFO_RS01715 a2cefbc277732469be92c305a9a13dcb 426 Pfam PF00654 Voltage gated chloride channel 60 394 4.9E-63 T 25-04-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CLFO_RS01715 a2cefbc277732469be92c305a9a13dcb 426 Gene3D G3DSA:1.10.3080.10 11 394 1.2E-55 T 25-04-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CLFO_RS20540 4e65b9a4ec419de29ed457dce6a16fcd 100 SMART SM00858 17 92 1.7E-10 T 25-04-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 CLFO_RS20540 4e65b9a4ec419de29ed457dce6a16fcd 100 Pfam PF08666 SAF domain 17 91 1.1E-10 T 25-04-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 CLFO_RS12300 64d3626d7e5e9ea3f6c64870f9c97ef4 88 Pfam PF13091 PLD-like domain 19 85 7.3E-9 T 25-04-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 CLFO_RS12300 64d3626d7e5e9ea3f6c64870f9c97ef4 88 SUPERFAMILY SSF56024 20 83 1.26E-14 T 25-04-2017 CLFO_RS12300 64d3626d7e5e9ea3f6c64870f9c97ef4 88 SMART SM00155 34 61 0.0024 T 25-04-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CLFO_RS12300 64d3626d7e5e9ea3f6c64870f9c97ef4 88 Gene3D G3DSA:3.30.870.10 20 86 2.4E-14 T 25-04-2017 CLFO_RS03050 ad7c8771a55f6015fe137668692175ea 207 SUPERFAMILY SSF52540 19 195 1.17E-38 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03050 ad7c8771a55f6015fe137668692175ea 207 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 189 1.7E-74 T 25-04-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CLFO_RS03050 ad7c8771a55f6015fe137668692175ea 207 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 28.47 T 25-04-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CLFO_RS03050 ad7c8771a55f6015fe137668692175ea 207 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 25 190 1.7E-12 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS03050 ad7c8771a55f6015fe137668692175ea 207 Pfam PF01926 50S ribosome-binding GTPase 25 140 1.8E-22 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS03050 ad7c8771a55f6015fe137668692175ea 207 Gene3D G3DSA:3.40.50.300 4 193 5.1E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07090 ffe2868bede301322daffe13b4eadbe7 2250 Pfam PF00395 S-layer homology domain 2061 2103 2.0E-13 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS07090 ffe2868bede301322daffe13b4eadbe7 2250 Pfam PF00395 S-layer homology domain 2192 2233 7.7E-9 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS07090 ffe2868bede301322daffe13b4eadbe7 2250 Pfam PF00395 S-layer homology domain 2121 2163 5.3E-13 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS07090 ffe2868bede301322daffe13b4eadbe7 2250 Gene3D G3DSA:3.90.420.10 1667 1798 2.7E-6 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS07090 ffe2868bede301322daffe13b4eadbe7 2250 Gene3D G3DSA:2.120.10.30 1334 1556 1.0E-12 T 25-04-2017 IPR011042 Six-bladed beta-propeller, TolB-like CLFO_RS07090 ffe2868bede301322daffe13b4eadbe7 2250 SUPERFAMILY SSF63829 1320 1528 9.59E-11 T 25-04-2017 CLFO_RS07090 ffe2868bede301322daffe13b4eadbe7 2250 Pfam PF00174 Oxidoreductase molybdopterin binding domain 1668 1808 1.8E-5 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS07090 ffe2868bede301322daffe13b4eadbe7 2250 SUPERFAMILY SSF56524 549 647 3.27E-6 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS07090 ffe2868bede301322daffe13b4eadbe7 2250 SUPERFAMILY SSF56524 1143 1253 3.79E-6 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS07090 ffe2868bede301322daffe13b4eadbe7 2250 SUPERFAMILY SSF56524 1664 1793 4.32E-11 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS06745 c8f3d5c1a0bc6e4d084ead57442090cf 511 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS06745 c8f3d5c1a0bc6e4d084ead57442090cf 511 SUPERFAMILY SSF52540 5 227 3.4E-54 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06745 c8f3d5c1a0bc6e4d084ead57442090cf 511 SMART SM00382 30 218 1.2E-7 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS06745 c8f3d5c1a0bc6e4d084ead57442090cf 511 Gene3D G3DSA:3.40.50.300 2 228 2.0E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06745 c8f3d5c1a0bc6e4d084ead57442090cf 511 Gene3D G3DSA:3.40.50.300 254 488 2.4E-43 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06745 c8f3d5c1a0bc6e4d084ead57442090cf 511 SUPERFAMILY SSF52540 256 488 6.3E-40 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06745 c8f3d5c1a0bc6e4d084ead57442090cf 511 Pfam PF00005 ABC transporter 275 430 4.1E-15 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS06745 c8f3d5c1a0bc6e4d084ead57442090cf 511 Pfam PF00005 ABC transporter 24 170 5.0E-28 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 Gene3D G3DSA:3.30.2090.10 715 803 9.5E-15 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 Gene3D G3DSA:1.10.3850.10 806 1020 1.1E-60 T 25-04-2017 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 Gene3D G3DSA:3.30.70.1430 564 660 1.3E-12 T 25-04-2017 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 Gene3D G3DSA:1.20.1640.10 298 496 3.0E-59 T 25-04-2017 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 Gene3D G3DSA:3.30.70.1320 268 297 1.5E-14 T 25-04-2017 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 Gene3D G3DSA:3.30.70.1320 140 177 1.5E-14 T 25-04-2017 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 SUPERFAMILY SSF82693 40 134 1.39E-25 T 25-04-2017 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 SUPERFAMILY SSF82714 715 800 8.11E-15 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 SUPERFAMILY SSF82866 288 486 6.28E-47 T 25-04-2017 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1019 7.9E-270 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 4.9E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.9E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 4.9E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 4.9E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.9E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 4.9E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 4.9E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 4.9E-54 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 SUPERFAMILY SSF82866 800 1021 4.32E-52 T 25-04-2017 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 Gene3D G3DSA:3.30.70.1430 40 139 4.2E-27 T 25-04-2017 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 Gene3D G3DSA:3.30.2090.10 182 262 2.7E-17 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 SUPERFAMILY SSF82714 182 261 4.45E-15 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 SUPERFAMILY SSF82693 563 659 1.46E-15 T 25-04-2017 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 SUPERFAMILY SSF82693 136 180 3.4E-18 T 25-04-2017 CLFO_RS00780 6428bdbda642f692106ce9c9136391a2 1040 SUPERFAMILY SSF82693 266 321 3.4E-18 T 25-04-2017 CLFO_RS06420 e3be3e782f564e374da620c6833677fc 351 Pfam PF02626 Allophanate hydrolase subunit 2 26 288 9.5E-88 T 25-04-2017 IPR003778 Carboxyltransferase domain, subdomain A and B CLFO_RS06420 e3be3e782f564e374da620c6833677fc 351 Gene3D G3DSA:2.40.100.10 197 298 9.6E-5 T 25-04-2017 IPR029000 Cyclophilin-like domain CLFO_RS06420 e3be3e782f564e374da620c6833677fc 351 SMART SM00797 25 305 3.5E-130 T 25-04-2017 IPR003778 Carboxyltransferase domain, subdomain A and B CLFO_RS06420 e3be3e782f564e374da620c6833677fc 351 SUPERFAMILY SSF50891 181 295 5.69E-8 T 25-04-2017 IPR029000 Cyclophilin-like domain CLFO_RS06420 e3be3e782f564e374da620c6833677fc 351 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 4 312 1.0E-96 T 25-04-2017 IPR003778 Carboxyltransferase domain, subdomain A and B CLFO_RS17765 333275ab210c4c72ad51b5b3bd9372c9 470 SUPERFAMILY SSF53271 93 234 7.1E-10 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS17765 333275ab210c4c72ad51b5b3bd9372c9 470 Pfam PF15609 Phosphoribosyl transferase 40 259 2.8E-75 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS17765 333275ab210c4c72ad51b5b3bd9372c9 470 Gene3D G3DSA:3.40.50.2020 169 257 1.0E-7 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS17765 333275ab210c4c72ad51b5b3bd9372c9 470 Pfam PF12500 TRSP domain C terminus to PRTase_2 324 449 5.0E-37 T 25-04-2017 IPR022537 TRSP domain CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 427 2.8E-191 T 25-04-2017 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 Gene3D G3DSA:3.40.50.300 96 297 3.9E-81 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 SMART SM00382 100 301 3.4E-9 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 1.7E-78 T 25-04-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 Pfam PF02978 Signal peptide binding domain 327 425 1.5E-34 T 25-04-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 444 34.661 T 25-04-2017 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 25-04-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 SUPERFAMILY SSF52540 43 353 3.79E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 SUPERFAMILY SSF47446 327 428 9.48E-37 T 25-04-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 Gene3D G3DSA:1.10.260.30 327 429 1.7E-39 T 25-04-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 SMART SM00963 2 87 1.4E-35 T 25-04-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 SMART SM00962 101 296 4.6E-120 T 25-04-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 Gene3D G3DSA:1.20.120.140 3 89 3.1E-35 T 25-04-2017 CLFO_RS11230 9b05391c4b29d34bda464ca4ae1847fa 448 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 2.2E-23 T 25-04-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS11450 980824d50435ec6d4504fef301df5f0e 590 Gene3D G3DSA:3.40.970.40 260 306 4.7E-5 T 25-04-2017 CLFO_RS11450 980824d50435ec6d4504fef301df5f0e 590 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 457 1.8E-152 T 25-04-2017 CLFO_RS11450 980824d50435ec6d4504fef301df5f0e 590 Gene3D G3DSA:1.10.8.50 169 250 1.1E-10 T 25-04-2017 CLFO_RS11450 980824d50435ec6d4504fef301df5f0e 590 Gene3D G3DSA:2.30.310.10 1 167 5.6E-59 T 25-04-2017 CLFO_RS11450 980824d50435ec6d4504fef301df5f0e 590 Pfam PF05670 Domain of unknown function (DUF814) 471 557 4.9E-29 T 25-04-2017 IPR008532 Domain of unknown function DUF814 CLFO_RS11450 980824d50435ec6d4504fef301df5f0e 590 SUPERFAMILY SSF46946 179 243 2.5E-7 T 25-04-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CLFO_RS11010 a135cbce708d37492d61ced6ee8149bd 362 Pfam PF00072 Response regulator receiver domain 11 114 5.7E-26 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS11010 a135cbce708d37492d61ced6ee8149bd 362 SUPERFAMILY SSF52172 7 116 1.14E-29 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS11010 a135cbce708d37492d61ced6ee8149bd 362 PIRSF PIRSF000876 5 361 8.8E-132 T 25-04-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLFO_RS11010 a135cbce708d37492d61ced6ee8149bd 362 Gene3D G3DSA:3.40.50.2300 7 115 2.8E-31 T 25-04-2017 CLFO_RS11010 a135cbce708d37492d61ced6ee8149bd 362 SUPERFAMILY SSF52738 168 359 1.06E-60 T 25-04-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLFO_RS11010 a135cbce708d37492d61ced6ee8149bd 362 Pfam PF01339 CheB methylesterase 172 354 1.3E-60 T 25-04-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLFO_RS11010 a135cbce708d37492d61ced6ee8149bd 362 SMART SM00448 8 119 1.0E-25 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS11010 a135cbce708d37492d61ced6ee8149bd 362 Gene3D G3DSA:3.40.50.180 165 359 2.4E-74 T 25-04-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLFO_RS11010 a135cbce708d37492d61ced6ee8149bd 362 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 8 360 39.515 T 25-04-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 161 189 - T 25-04-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 Gene3D G3DSA:3.40.50.720 18 267 3.7E-77 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 32 266 2.1E-58 T 25-04-2017 CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 212 7.2E-38 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 250 7.2E-38 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 7.2E-38 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 27 44 7.2E-38 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 7.2E-38 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 7.2E-38 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 SUPERFAMILY SSF51735 24 268 2.31E-76 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 1.7E-12 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 101 112 1.7E-12 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS14940 d00a1cf1329582713ca4c577dafd1fd9 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 1.7E-12 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 9.3E-81 T 25-04-2017 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 SUPERFAMILY SSF52440 2 101 1.4E-34 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 SMART SM01210 327 417 1.2E-46 T 25-04-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 Gene3D G3DSA:3.40.50.20 2 93 6.8E-37 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 100 3.9E-34 T 25-04-2017 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 Gene3D G3DSA:3.30.470.20 189 325 1.2E-59 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 SUPERFAMILY SSF56059 102 323 2.69E-62 T 25-04-2017 CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 SMART SM01209 101 293 2.5E-128 T 25-04-2017 CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 417 40.74 T 25-04-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 Gene3D G3DSA:3.30.1490.20 120 188 1.5E-27 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 417 1.5E-172 T 25-04-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 Gene3D G3DSA:3.90.600.10 327 416 5.8E-35 T 25-04-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 416 5.5E-30 T 25-04-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 25-04-2017 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLFO_RS02045 e0cb283a21e7e9b4a0e00a3bafe95c7c 417 SUPERFAMILY SSF51246 325 417 2.15E-30 T 25-04-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS00010 6f79a38f4ae02c771004af53033e1eb4 367 Gene3D G3DSA:3.10.150.10 247 364 1.6E-37 T 25-04-2017 CLFO_RS00010 6f79a38f4ae02c771004af53033e1eb4 367 PIRSF PIRSF000804 1 365 9.0E-122 T 25-04-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS00010 6f79a38f4ae02c771004af53033e1eb4 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 243 363 8.8E-32 T 25-04-2017 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS00010 6f79a38f4ae02c771004af53033e1eb4 367 Gene3D G3DSA:3.10.150.10 1 121 4.9E-33 T 25-04-2017 CLFO_RS00010 6f79a38f4ae02c771004af53033e1eb4 367 Gene3D G3DSA:3.10.150.10 122 246 1.5E-35 T 25-04-2017 CLFO_RS00010 6f79a38f4ae02c771004af53033e1eb4 367 SUPERFAMILY SSF55979 243 364 1.26E-35 T 25-04-2017 CLFO_RS00010 6f79a38f4ae02c771004af53033e1eb4 367 SMART SM00480 17 360 1.9E-134 T 25-04-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS00010 6f79a38f4ae02c771004af53033e1eb4 367 SUPERFAMILY SSF55979 1 116 2.75E-29 T 25-04-2017 CLFO_RS00010 6f79a38f4ae02c771004af53033e1eb4 367 SUPERFAMILY SSF55979 125 242 2.57E-26 T 25-04-2017 CLFO_RS00010 6f79a38f4ae02c771004af53033e1eb4 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 4.2E-31 T 25-04-2017 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS00010 6f79a38f4ae02c771004af53033e1eb4 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 128 239 1.3E-31 T 25-04-2017 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS00010 6f79a38f4ae02c771004af53033e1eb4 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 364 9.4E-106 T 25-04-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 SUPERFAMILY SSF51419 345 579 2.43E-58 T 25-04-2017 IPR029066 PLP-binding barrel CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 Hamap MF_01201 Alanine racemase. 338 705 32.121 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 Gene3D G3DSA:2.40.37.10 555 706 1.4E-51 T 25-04-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 PRINTS PR00992 Alanine racemase signature 611 626 1.8E-51 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 PRINTS PR00992 Alanine racemase signature 457 469 1.8E-51 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 PRINTS PR00992 Alanine racemase signature 490 501 1.8E-51 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 PRINTS PR00992 Alanine racemase signature 536 563 1.8E-51 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 PRINTS PR00992 Alanine racemase signature 364 380 1.8E-51 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 PRINTS PR00992 Alanine racemase signature 400 418 1.8E-51 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 PRINTS PR00992 Alanine racemase signature 687 700 1.8E-51 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 PRINTS PR00992 Alanine racemase signature 594 609 1.8E-51 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 PRINTS PR00992 Alanine racemase signature 631 648 1.8E-51 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 SUPERFAMILY SSF50621 572 706 2.02E-44 T 25-04-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 Pfam PF01757 Acyltransferase family 8 324 7.1E-19 T 25-04-2017 IPR002656 Acyltransferase 3 GO:0016747 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 Pfam PF00842 Alanine racemase, C-terminal domain 578 704 6.8E-36 T 25-04-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 SMART SM01005 578 705 1.2E-57 T 25-04-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 TIGRFAM TIGR00492 alr: alanine racemase 340 705 3.0E-107 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 369 379 - T 25-04-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 Pfam PF01168 Alanine racemase, N-terminal domain 345 561 6.8E-56 T 25-04-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS14985 3c1cdcc39204c730b05b7fb732887e86 708 Gene3D G3DSA:3.20.20.10 347 554 6.6E-63 T 25-04-2017 IPR029066 PLP-binding barrel CLFO_RS16765 14f86dddf4924c285cbef2426e8cf0af 248 SUPERFAMILY SSF46894 69 119 7.23E-8 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS16765 14f86dddf4924c285cbef2426e8cf0af 248 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 179 246 7.3E-29 T 25-04-2017 IPR018656 Domain of unknown function DUF2087 CLFO_RS16765 14f86dddf4924c285cbef2426e8cf0af 248 Gene3D G3DSA:1.10.10.10 72 113 2.2E-7 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS05845 19f93055897d128b9bf6bdb19af64d66 196 SUPERFAMILY SSF48537 7 190 7.03E-5 T 25-04-2017 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 CLFO_RS05845 19f93055897d128b9bf6bdb19af64d66 196 Pfam PF00882 Zinc dependent phospholipase C 5 158 2.3E-21 T 25-04-2017 IPR029002 Phospholipase C/D CLFO_RS13485 d1aefaef7b9c1762a12696aa01085bff 245 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 217 2.4E-46 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13485 d1aefaef7b9c1762a12696aa01085bff 245 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 240 16.091 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13485 d1aefaef7b9c1762a12696aa01085bff 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 80 98 3.5E-29 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13485 d1aefaef7b9c1762a12696aa01085bff 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 149 177 3.5E-29 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13485 d1aefaef7b9c1762a12696aa01085bff 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 98 124 3.5E-29 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13485 d1aefaef7b9c1762a12696aa01085bff 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 3.5E-29 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13485 d1aefaef7b9c1762a12696aa01085bff 245 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 222 1.2E-49 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13485 d1aefaef7b9c1762a12696aa01085bff 245 ProSitePatterns PS01218 TatC family signature. 149 168 - T 25-04-2017 IPR019820 Sec-independent periplasmic protein translocase, conserved site CLFO_RS02285 df8fa337fce849ae27e37f41363105f6 426 PIRSF PIRSF000505 1 426 2.9E-122 T 25-04-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CLFO_RS02285 df8fa337fce849ae27e37f41363105f6 426 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 25-04-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CLFO_RS02285 df8fa337fce849ae27e37f41363105f6 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 12 425 2.8E-135 T 25-04-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CLFO_RS02285 df8fa337fce849ae27e37f41363105f6 426 SUPERFAMILY SSF55205 4 424 9.68E-133 T 25-04-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CLFO_RS02285 df8fa337fce849ae27e37f41363105f6 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 421 5.9E-127 T 25-04-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CLFO_RS02285 df8fa337fce849ae27e37f41363105f6 426 Gene3D G3DSA:3.65.10.10 20 228 5.1E-59 T 25-04-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CLFO_RS02285 df8fa337fce849ae27e37f41363105f6 426 Gene3D G3DSA:3.65.10.10 229 424 5.4E-58 T 25-04-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CLFO_RS02285 df8fa337fce849ae27e37f41363105f6 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 426 33.356 T 25-04-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CLFO_RS02285 df8fa337fce849ae27e37f41363105f6 426 ProSitePatterns PS00104 EPSP synthase signature 1. 86 100 - T 25-04-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CLFO_RS16130 fc243a196b73b01fbb8f1dfcb6773672 165 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 154 3.6E-36 T 25-04-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CLFO_RS04005 eb87f69e9e86ed599c836745024ff84f 657 Pfam PF13777 Domain of unknown function (DUF4173) 422 609 2.6E-58 T 25-04-2017 IPR025231 Domain of unknown function DUF4173 CLFO_RS04005 eb87f69e9e86ed599c836745024ff84f 657 Gene3D G3DSA:3.90.79.10 5 133 9.7E-5 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 Pfam PF00672 HAMP domain 166 233 4.6E-14 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 584 1.3E-26 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 SMART SM00091 244 311 2.1E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 Gene3D G3DSA:1.10.287.130 353 413 4.5E-21 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 Gene3D G3DSA:3.30.450.20 239 352 8.5E-18 T 25-04-2017 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 SMART SM00387 474 586 8.3E-43 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 SMART SM00388 361 428 3.5E-21 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 2.3E-19 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 2.3E-19 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 2.3E-19 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 539 2.3E-19 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 SUPERFAMILY SSF47384 346 428 7.65E-20 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 Gene3D G3DSA:3.30.565.10 414 585 1.4E-48 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 SUPERFAMILY SSF158472 187 236 1.22E-10 T 25-04-2017 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 Pfam PF16736 Single Cache-like 31 137 8.0E-12 T 25-04-2017 IPR031967 PhoR, single Cache-like domain CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 SUPERFAMILY SSF55874 417 584 5.76E-47 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 Gene3D G3DSA:3.30.450.20 27 158 3.7E-19 T 25-04-2017 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 SMART SM00304 185 237 6.7E-14 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 241 360 3.3E-14 T 25-04-2017 IPR000014 PAS domain CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 Pfam PF00512 His Kinase A (phospho-acceptor) domain 361 427 3.3E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 Pfam PF00989 PAS fold 245 352 6.4E-14 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS11655 1eb54af128e99c4472b9912389eb1bf3 586 SUPERFAMILY SSF55785 235 353 1.29E-13 T 25-04-2017 IPR000014 PAS domain CLFO_RS20250 8c96b1ad0be85769edebc6361a4f2b13 341 SUPERFAMILY SSF102114 83 277 1.7E-8 T 25-04-2017 CLFO_RS20250 8c96b1ad0be85769edebc6361a4f2b13 341 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 5 341 3.3E-142 T 25-04-2017 IPR023897 Spore photoproduct lyase GO:0003913 CLFO_RS20250 8c96b1ad0be85769edebc6361a4f2b13 341 Gene3D G3DSA:3.20.20.70 83 330 5.8E-7 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS20250 8c96b1ad0be85769edebc6361a4f2b13 341 Pfam PF04055 Radical SAM superfamily 85 244 5.2E-7 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS16180 80faa1363c24658b2d1067252c414e4a 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 23 317 3.1E-25 T 25-04-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CLFO_RS16180 80faa1363c24658b2d1067252c414e4a 318 Gene3D G3DSA:3.40.50.720 3 115 1.4E-26 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16180 80faa1363c24658b2d1067252c414e4a 318 Gene3D G3DSA:3.40.50.720 116 288 1.8E-63 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16180 80faa1363c24658b2d1067252c414e4a 318 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 25-04-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLFO_RS16180 80faa1363c24658b2d1067252c414e4a 318 SUPERFAMILY SSF52283 1 121 1.21E-24 T 25-04-2017 CLFO_RS16180 80faa1363c24658b2d1067252c414e4a 318 SUPERFAMILY SSF51735 104 288 9.74E-57 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16180 80faa1363c24658b2d1067252c414e4a 318 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 151 178 - T 25-04-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLFO_RS16180 80faa1363c24658b2d1067252c414e4a 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 287 2.7E-59 T 25-04-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLFO_RS06705 1ea8943e5cb929e30f3046761c03b5ff 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 344 1.7E-20 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS06705 1ea8943e5cb929e30f3046761c03b5ff 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 1.7E-20 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS06705 1ea8943e5cb929e30f3046761c03b5ff 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 1.7E-20 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS06705 1ea8943e5cb929e30f3046761c03b5ff 567 SMART SM00283 291 566 2.5E-54 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS06705 1ea8943e5cb929e30f3046761c03b5ff 567 Pfam PF00672 HAMP domain 191 258 4.1E-15 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS06705 1ea8943e5cb929e30f3046761c03b5ff 567 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 181 1.7E-18 T 25-04-2017 IPR024478 4HB MCP domain CLFO_RS06705 1ea8943e5cb929e30f3046761c03b5ff 567 SUPERFAMILY SSF58104 230 264 1.06E-67 T 25-04-2017 CLFO_RS06705 1ea8943e5cb929e30f3046761c03b5ff 567 SUPERFAMILY SSF58104 297 566 1.06E-67 T 25-04-2017 CLFO_RS06705 1ea8943e5cb929e30f3046761c03b5ff 567 SMART SM00304 210 262 1.5E-12 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS06705 1ea8943e5cb929e30f3046761c03b5ff 567 Gene3D G3DSA:1.10.287.950 494 556 1.1E-47 T 25-04-2017 CLFO_RS06705 1ea8943e5cb929e30f3046761c03b5ff 567 Gene3D G3DSA:1.10.287.950 306 458 1.1E-47 T 25-04-2017 CLFO_RS06705 1ea8943e5cb929e30f3046761c03b5ff 567 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 364 549 2.7E-42 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 SMART SM00062 45 264 3.9E-32 T 25-04-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 SMART SM00052 656 898 2.2E-92 T 25-04-2017 IPR001633 EAL domain CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 SUPERFAMILY SSF141868 662 902 1.57E-77 T 25-04-2017 IPR001633 EAL domain CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 SUPERFAMILY SSF55073 496 648 1.18E-40 T 25-04-2017 IPR029787 Nucleotide cyclase CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 487 644 2.8E-35 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 363 484 3.6E-7 T 25-04-2017 IPR000014 PAS domain CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 SMART SM00267 479 646 1.2E-48 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 Gene3D G3DSA:3.40.190.10 122 212 2.7E-10 T 25-04-2017 CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 262 1.3E-45 T 25-04-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 SUPERFAMILY SSF53850 38 264 5.13E-48 T 25-04-2017 CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 Gene3D G3DSA:3.30.70.270 491 654 3.2E-47 T 25-04-2017 CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 Gene3D G3DSA:3.20.20.450 659 901 3.5E-84 T 25-04-2017 IPR001633 EAL domain CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 Gene3D G3DSA:3.40.190.10 46 121 1.9E-30 T 25-04-2017 CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 Gene3D G3DSA:3.40.190.10 223 262 1.9E-30 T 25-04-2017 CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 Pfam PF00990 Diguanylate cyclase, GGDEF domain 490 641 4.6E-40 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 Gene3D G3DSA:3.30.450.20 351 488 4.9E-13 T 25-04-2017 CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 SUPERFAMILY SSF55785 370 481 4.61E-11 T 25-04-2017 IPR000014 PAS domain CLFO_RS06915 97b217a0ee32c38707ab4c627b25f350 909 Pfam PF00563 EAL domain 663 893 1.2E-64 T 25-04-2017 IPR001633 EAL domain CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 SUPERFAMILY SSF56712 4 599 9.68E-174 T 25-04-2017 IPR023405 DNA topoisomerase, type IA, core domain CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 299 314 - T 25-04-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 Hamap MF_00953 DNA topoisomerase 3 [topB]. 3 638 65.495 T 25-04-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 Gene3D G3DSA:1.10.460.10 155 209 1.2E-53 T 25-04-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 Gene3D G3DSA:1.10.460.10 471 598 1.2E-53 T 25-04-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 TIGRFAM TIGR01056 topB: DNA topoisomerase III 5 726 1.7E-263 T 25-04-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 Pfam PF01751 Toprim domain 6 134 1.2E-14 T 25-04-2017 IPR006171 Toprim domain CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 SMART SM00436 126 216 7.7E-39 T 25-04-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 512 526 7.3E-26 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 7.3E-26 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 7.3E-26 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 305 314 7.3E-26 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 387 403 7.3E-26 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 Gene3D G3DSA:3.40.50.140 5 153 1.3E-46 T 25-04-2017 IPR006171 Toprim domain CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 Pfam PF01131 DNA topoisomerase 153 583 2.2E-120 T 25-04-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 SMART SM00493 3 126 1.9E-17 T 25-04-2017 IPR006171 Toprim domain CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 SMART SM00437 262 549 2.2E-86 T 25-04-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 Gene3D G3DSA:2.70.20.10 210 324 1.9E-19 T 25-04-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLFO_RS14745 140e7e4194c36cfd35fda68734580409 728 Gene3D G3DSA:2.70.20.10 353 470 2.8E-38 T 25-04-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLFO_RS13360 e7d1da05476a64be3b6cf26f3d75cabc 274 Pfam PF02633 Creatinine amidohydrolase 12 267 1.4E-44 T 25-04-2017 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167 CLFO_RS13360 e7d1da05476a64be3b6cf26f3d75cabc 274 SUPERFAMILY SSF102215 10 268 5.62E-35 T 25-04-2017 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167 CLFO_RS13360 e7d1da05476a64be3b6cf26f3d75cabc 274 Gene3D G3DSA:3.40.50.10310 10 269 1.2E-50 T 25-04-2017 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167 CLFO_RS05625 58cc14ec5c3ad7cd763991d48a7a39a0 255 PIRSF PIRSF005647 3 255 1.0E-65 T 25-04-2017 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type CLFO_RS05625 58cc14ec5c3ad7cd763991d48a7a39a0 255 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 221 4.8E-21 T 25-04-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLFO_RS05625 58cc14ec5c3ad7cd763991d48a7a39a0 255 SUPERFAMILY SSF52540 1 253 1.42E-31 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05625 58cc14ec5c3ad7cd763991d48a7a39a0 255 Gene3D G3DSA:3.40.50.300 2 253 6.1E-43 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15545 a64853f03fea1e39aa6712c1b8ffe29f 183 Pfam PF01381 Helix-turn-helix 6 57 4.3E-14 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS15545 a64853f03fea1e39aa6712c1b8ffe29f 183 SMART SM00530 5 60 4.2E-15 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS15545 a64853f03fea1e39aa6712c1b8ffe29f 183 Pfam PF07883 Cupin domain 109 174 2.6E-15 T 25-04-2017 IPR013096 Cupin 2, conserved barrel CLFO_RS15545 a64853f03fea1e39aa6712c1b8ffe29f 183 SUPERFAMILY SSF51182 53 181 8.91E-26 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS15545 a64853f03fea1e39aa6712c1b8ffe29f 183 SUPERFAMILY SSF47413 2 65 9.01E-17 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS15545 a64853f03fea1e39aa6712c1b8ffe29f 183 Gene3D G3DSA:1.10.260.40 2 54 3.3E-19 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS15545 a64853f03fea1e39aa6712c1b8ffe29f 183 Gene3D G3DSA:2.60.120.10 55 175 3.3E-22 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS01230 4c822d63ae1af83cc059e7224916adae 172 Pfam PF04892 VanZ like family 10 158 3.3E-16 T 25-04-2017 IPR006976 VanZ-like CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 355 438 4.0E-5 T 25-04-2017 IPR019489 Clp ATPase, C-terminal CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 463 3.9E-186 T 25-04-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 SMART SM01086 355 449 1.5E-15 T 25-04-2017 IPR019489 Clp ATPase, C-terminal CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 Gene3D G3DSA:1.10.8.10 111 197 2.4E-21 T 25-04-2017 CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 Gene3D G3DSA:1.10.8.10 233 263 2.4E-21 T 25-04-2017 CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 Gene3D G3DSA:3.40.50.300 265 350 1.3E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 Gene3D G3DSA:3.40.50.300 4 110 1.3E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 SMART SM00382 49 356 3.5E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 Gene3D G3DSA:1.10.8.60 355 462 1.4E-31 T 25-04-2017 CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 463 40.891 T 25-04-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 Pfam PF07724 AAA domain (Cdc48 subfamily) 211 349 1.6E-39 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 107 2.5E-6 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS11165 83a559c477b4420fe1a0b9bf4a06ca73 463 SUPERFAMILY SSF52540 4 459 3.67E-76 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 Gene3D G3DSA:3.40.50.300 123 304 3.7E-42 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 662 742 2.0E-26 T 25-04-2017 IPR019489 Clp ATPase, C-terminal CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 166 298 3.2E-11 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 Gene3D G3DSA:1.10.8.60 674 752 6.4E-31 T 25-04-2017 CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 SMART SM01086 662 751 3.3E-32 T 25-04-2017 IPR019489 Clp ATPase, C-terminal CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 Gene3D G3DSA:3.40.50.300 445 673 1.3E-56 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 525 543 - T 25-04-2017 IPR028299 ClpA/B, conserved site 2 CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 Pfam PF07724 AAA domain (Cdc48 subfamily) 492 655 4.9E-53 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 569 587 3.2E-38 T 25-04-2017 IPR001270 ClpA/B family GO:0005524 CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 3.2E-38 T 25-04-2017 IPR001270 ClpA/B family GO:0005524 CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 616 3.2E-38 T 25-04-2017 IPR001270 ClpA/B family GO:0005524 CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 540 558 3.2E-38 T 25-04-2017 IPR001270 ClpA/B family GO:0005524 CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 Gene3D G3DSA:1.10.8.60 307 389 1.2E-29 T 25-04-2017 CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 SMART SM00382 491 663 1.3E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 SMART SM00382 161 307 2.6E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 SUPERFAMILY SSF52540 124 406 1.05E-68 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20510 a7d4e954d8ddcc5b618ea773ac0e753f 755 SUPERFAMILY SSF52540 441 747 1.47E-76 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17550 3c58a803921ad9d50bb587c406e53924 418 Pfam PF01979 Amidohydrolase family 74 411 2.9E-16 T 25-04-2017 IPR006680 Amidohydrolase-related GO:0016787 CLFO_RS17550 3c58a803921ad9d50bb587c406e53924 418 Gene3D G3DSA:3.20.20.140 84 360 2.5E-40 T 25-04-2017 CLFO_RS17550 3c58a803921ad9d50bb587c406e53924 418 Gene3D G3DSA:2.30.40.10 361 403 7.0E-7 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS17550 3c58a803921ad9d50bb587c406e53924 418 TIGRFAM TIGR01224 hutI: imidazolonepropionase 36 412 1.0E-143 T 25-04-2017 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS17550 3c58a803921ad9d50bb587c406e53924 418 Hamap MF_00372 Imidazolonepropionase [hutI]. 5 414 42.658 T 25-04-2017 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS17550 3c58a803921ad9d50bb587c406e53924 418 SUPERFAMILY SSF51338 374 415 2.16E-19 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS17550 3c58a803921ad9d50bb587c406e53924 418 SUPERFAMILY SSF51338 34 77 2.16E-19 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS17550 3c58a803921ad9d50bb587c406e53924 418 SUPERFAMILY SSF51556 76 375 3.67E-79 T 25-04-2017 IPR032466 Metal-dependent hydrolase CLFO_RS17550 3c58a803921ad9d50bb587c406e53924 418 Gene3D G3DSA:2.30.40.10 6 83 1.9E-15 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS14630 19ce6b5f1c94e24b953f27cd01ed9090 223 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 75 82 - T 25-04-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLFO_RS14630 19ce6b5f1c94e24b953f27cd01ed9090 223 Pfam PF00484 Carbonic anhydrase 70 216 4.3E-45 T 25-04-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLFO_RS14630 19ce6b5f1c94e24b953f27cd01ed9090 223 SUPERFAMILY SSF53056 23 220 4.97E-53 T 25-04-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLFO_RS14630 19ce6b5f1c94e24b953f27cd01ed9090 223 SMART SM00947 63 220 6.4E-56 T 25-04-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLFO_RS14630 19ce6b5f1c94e24b953f27cd01ed9090 223 Gene3D G3DSA:3.40.1050.10 21 220 3.0E-59 T 25-04-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLFO_RS14630 19ce6b5f1c94e24b953f27cd01ed9090 223 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 112 132 - T 25-04-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLFO_RS03720 c88ce9e83ef26af91b7fcf0ecf2ca9e5 315 Gene3D G3DSA:3.40.1190.20 1 310 1.1E-98 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS03720 c88ce9e83ef26af91b7fcf0ecf2ca9e5 315 SUPERFAMILY SSF53613 1 307 2.38E-90 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS03720 c88ce9e83ef26af91b7fcf0ecf2ca9e5 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 251 264 - T 25-04-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLFO_RS03720 c88ce9e83ef26af91b7fcf0ecf2ca9e5 315 PRINTS PR00990 Ribokinase signature 182 197 5.1E-5 T 25-04-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CLFO_RS03720 c88ce9e83ef26af91b7fcf0ecf2ca9e5 315 PRINTS PR00990 Ribokinase signature 27 46 5.1E-5 T 25-04-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CLFO_RS03720 c88ce9e83ef26af91b7fcf0ecf2ca9e5 315 PRINTS PR00990 Ribokinase signature 221 232 5.1E-5 T 25-04-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CLFO_RS03720 c88ce9e83ef26af91b7fcf0ecf2ca9e5 315 Pfam PF00294 pfkB family carbohydrate kinase 2 299 2.3E-63 T 25-04-2017 IPR011611 Carbohydrate kinase PfkB CLFO_RS04530 1012bb221d65a10a36af18a7479eef09 159 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 14 154 1.1E-59 T 25-04-2017 IPR014203 Sporulation stage V, protein AC CLFO_RS04530 1012bb221d65a10a36af18a7479eef09 159 Pfam PF03862 SpoVA protein 32 149 3.4E-39 T 25-04-2017 IPR005562 SpoVA CLFO_RS00280 8deb4a4576a28cf2cc48ee4c00d298c5 501 Gene3D G3DSA:3.40.50.10090 380 499 4.0E-31 T 25-04-2017 CLFO_RS00280 8deb4a4576a28cf2cc48ee4c00d298c5 501 Gene3D G3DSA:3.40.50.10090 260 378 2.9E-33 T 25-04-2017 CLFO_RS00280 8deb4a4576a28cf2cc48ee4c00d298c5 501 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 216 9.8E-47 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00280 8deb4a4576a28cf2cc48ee4c00d298c5 501 SUPERFAMILY SSF53790 3 256 3.14E-78 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00280 8deb4a4576a28cf2cc48ee4c00d298c5 501 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 25-04-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CLFO_RS00280 8deb4a4576a28cf2cc48ee4c00d298c5 501 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 25-04-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CLFO_RS00280 8deb4a4576a28cf2cc48ee4c00d298c5 501 Gene3D G3DSA:3.30.950.10 120 259 8.7E-54 T 25-04-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00280 8deb4a4576a28cf2cc48ee4c00d298c5 501 SUPERFAMILY SSF69618 254 499 2.62E-67 T 25-04-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00280 8deb4a4576a28cf2cc48ee4c00d298c5 501 Gene3D G3DSA:3.40.1010.10 5 119 3.0E-43 T 25-04-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00280 8deb4a4576a28cf2cc48ee4c00d298c5 501 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 6 241 8.5E-97 T 25-04-2017 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CLFO_RS00280 8deb4a4576a28cf2cc48ee4c00d298c5 501 Pfam PF02602 Uroporphyrinogen-III synthase HemD 268 495 4.2E-60 T 25-04-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 6.5E-16 T 25-04-2017 IPR019489 Clp ATPase, C-terminal CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 SMART SM00382 107 260 7.8E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.724 T 25-04-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 Pfam PF06689 ClpX C4-type zinc finger 10 47 1.2E-20 T 25-04-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 107 304 3.7E-50 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 Gene3D G3DSA:3.40.50.300 61 249 3.8E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 Gene3D G3DSA:3.40.50.300 288 306 3.8E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 Gene3D G3DSA:1.10.8.60 310 406 2.2E-36 T 25-04-2017 CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 SUPERFAMILY SSF52540 60 396 3.47E-78 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 SUPERFAMILY SSF57716 10 45 7.13E-12 T 25-04-2017 CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 SMART SM00994 9 48 1.8E-24 T 25-04-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 SMART SM01086 311 405 1.9E-32 T 25-04-2017 IPR019489 Clp ATPase, C-terminal CLFO_RS03025 a7ee4e11015f53e8069c7ec82b9cf3ee 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 6 405 5.4E-206 T 25-04-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 Gene3D G3DSA:3.30.70.1430 59 159 6.9E-26 T 25-04-2017 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 Gene3D G3DSA:3.30.2090.10 199 283 8.9E-16 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 Gene3D G3DSA:3.30.2090.10 797 881 1.3E-10 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 SUPERFAMILY SSF82714 200 283 1.83E-14 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 SUPERFAMILY SSF82693 292 347 3.4E-6 T 25-04-2017 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 SUPERFAMILY SSF82693 160 198 3.4E-6 T 25-04-2017 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 SUPERFAMILY SSF82693 59 152 3.4E-22 T 25-04-2017 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 SUPERFAMILY SSF82693 640 745 7.15E-12 T 25-04-2017 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 Gene3D G3DSA:3.30.70.1430 645 746 3.2E-11 T 25-04-2017 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 SUPERFAMILY SSF82714 797 881 2.22E-10 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 Gene3D G3DSA:1.10.3850.10 888 1101 6.1E-57 T 25-04-2017 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 PRINTS PR00702 Acriflavin resistance protein family signature 487 510 1.3E-33 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 PRINTS PR00702 Acriflavin resistance protein family signature 409 433 1.3E-33 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 PRINTS PR00702 Acriflavin resistance protein family signature 57 75 1.3E-33 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 PRINTS PR00702 Acriflavin resistance protein family signature 355 378 1.3E-33 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.3E-33 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 Gene3D G3DSA:1.20.1640.10 309 523 7.6E-52 T 25-04-2017 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 SUPERFAMILY SSF82866 887 1104 2.22E-46 T 25-04-2017 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 SUPERFAMILY SSF82866 317 512 2.88E-41 T 25-04-2017 CLFO_RS03200 c1dded2546f0c809b5513016041c4b67 1118 Pfam PF00873 AcrB/AcrD/AcrF family 23 1099 5.8E-200 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS10760 010367b1ce73a9a3655de027432d8108 276 SMART SM00481 4 70 7.7E-16 T 25-04-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLFO_RS10760 010367b1ce73a9a3655de027432d8108 276 Gene3D G3DSA:3.20.20.140 157 250 2.2E-42 T 25-04-2017 CLFO_RS10760 010367b1ce73a9a3655de027432d8108 276 Gene3D G3DSA:3.20.20.140 3 90 2.2E-42 T 25-04-2017 CLFO_RS10760 010367b1ce73a9a3655de027432d8108 276 Pfam PF02811 PHP domain 6 158 2.7E-9 T 25-04-2017 IPR004013 PHP domain GO:0003824 CLFO_RS10760 010367b1ce73a9a3655de027432d8108 276 SUPERFAMILY SSF89550 2 83 3.14E-47 T 25-04-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLFO_RS10760 010367b1ce73a9a3655de027432d8108 276 SUPERFAMILY SSF89550 165 272 3.14E-47 T 25-04-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLFO_RS21335 7d5ea06a1fb765d55a10ba7eb0dbfcb1 199 SMART SM00493 81 166 3.2E-18 T 25-04-2017 IPR006171 Toprim domain CLFO_RS21335 7d5ea06a1fb765d55a10ba7eb0dbfcb1 199 Pfam PF02132 RecR protein 40 79 4.2E-16 T 25-04-2017 IPR023628 Recombination protein RecR, C4-type zinc finger CLFO_RS21335 7d5ea06a1fb765d55a10ba7eb0dbfcb1 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 109.4 T 25-04-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CLFO_RS21335 7d5ea06a1fb765d55a10ba7eb0dbfcb1 199 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 25-04-2017 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CLFO_RS21335 7d5ea06a1fb765d55a10ba7eb0dbfcb1 199 Gene3D G3DSA:3.40.50.140 112 172 5.1E-7 T 25-04-2017 IPR006171 Toprim domain CLFO_RS21335 7d5ea06a1fb765d55a10ba7eb0dbfcb1 199 Pfam PF13662 Toprim domain 81 172 1.4E-27 T 25-04-2017 IPR006171 Toprim domain CLFO_RS21335 7d5ea06a1fb765d55a10ba7eb0dbfcb1 199 TIGRFAM TIGR00615 recR: recombination protein RecR 4 197 4.4E-88 T 25-04-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CLFO_RS21335 7d5ea06a1fb765d55a10ba7eb0dbfcb1 199 SUPERFAMILY SSF111304 3 199 7.72E-79 T 25-04-2017 IPR023627 Recombination protein RecR CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.9E-13 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.9E-13 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.9E-13 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 9.7E-74 T 25-04-2017 CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 Gene3D G3DSA:3.40.50.720 2 245 1.0E-95 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 2.1E-4 T 25-04-2017 CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 25-04-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 3.6E-92 T 25-04-2017 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.4E-47 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.4E-47 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.4E-47 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.4E-47 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.4E-47 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.4E-47 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15240 9907f8e22ecf5eb4892ceac08d007445 246 SUPERFAMILY SSF51735 4 245 1.48E-92 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 SUPERFAMILY SSF140490 436 538 1.57E-40 T 25-04-2017 CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 SUPERFAMILY SSF142984 352 435 2.35E-25 T 25-04-2017 CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 Gene3D G3DSA:3.40.30.10 5 99 3.3E-34 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 580 591 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 453 464 - T 25-04-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 Pfam PF10531 SLBB domain 356 402 1.7E-7 T 25-04-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 6 80 6.9E-8 T 25-04-2017 CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 SMART SM00928 440 485 7.9E-26 T 25-04-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 159 330 2.9E-49 T 25-04-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 549 560 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 SUPERFAMILY SSF54862 528 596 4.63E-15 T 25-04-2017 CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 441 525 5.1E-35 T 25-04-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 SUPERFAMILY SSF142019 111 351 7.19E-97 T 25-04-2017 CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 SUPERFAMILY SSF52833 5 95 8.72E-25 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 Pfam PF00037 4Fe-4S binding domain 574 595 4.1E-9 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS17650 05ca4c7b8abc9104d83aa5682fbf31e4 598 Gene3D G3DSA:3.30.70.20 546 595 6.0E-14 T 25-04-2017 CLFO_RS04695 71f427448e0c5b249001ce4b847c6308 666 Pfam PF02743 Cache domain 35 265 3.6E-26 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS04695 71f427448e0c5b249001ce4b847c6308 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 455 663 1.6E-39 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS04695 71f427448e0c5b249001ce4b847c6308 666 Pfam PF00672 HAMP domain 284 356 4.1E-7 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS04695 71f427448e0c5b249001ce4b847c6308 666 SMART SM00283 390 665 1.6E-62 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS04695 71f427448e0c5b249001ce4b847c6308 666 Gene3D G3DSA:3.30.450.20 143 280 2.1E-28 T 25-04-2017 CLFO_RS04695 71f427448e0c5b249001ce4b847c6308 666 SUPERFAMILY SSF58104 396 665 5.67E-63 T 25-04-2017 CLFO_RS04695 71f427448e0c5b249001ce4b847c6308 666 SUPERFAMILY SSF58104 335 363 5.67E-63 T 25-04-2017 CLFO_RS04695 71f427448e0c5b249001ce4b847c6308 666 Gene3D G3DSA:1.10.287.950 404 564 4.5E-43 T 25-04-2017 CLFO_RS04695 71f427448e0c5b249001ce4b847c6308 666 Gene3D G3DSA:1.10.287.950 607 656 4.5E-43 T 25-04-2017 CLFO_RS04695 71f427448e0c5b249001ce4b847c6308 666 SUPERFAMILY SSF103190 53 187 2.88E-5 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS16440 4b3a7f5e89891be840df919b3a334313 296 SUPERFAMILY SSF103481 185 284 4.71E-14 T 25-04-2017 CLFO_RS16440 4b3a7f5e89891be840df919b3a334313 296 SUPERFAMILY SSF103481 45 141 1.07E-13 T 25-04-2017 CLFO_RS16440 4b3a7f5e89891be840df919b3a334313 296 Pfam PF00892 EamA-like transporter family 11 140 2.5E-18 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS16440 4b3a7f5e89891be840df919b3a334313 296 Pfam PF00892 EamA-like transporter family 153 280 6.9E-14 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS01605 404fdf5d274441ad85c17ebac522b2a2 556 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 462 473 - T 25-04-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS01605 404fdf5d274441ad85c17ebac522b2a2 556 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 2 555 47.335 T 25-04-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS01605 404fdf5d274441ad85c17ebac522b2a2 556 Pfam PF00920 Dehydratase family 32 552 2.8E-225 T 25-04-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS01605 404fdf5d274441ad85c17ebac522b2a2 556 SUPERFAMILY SSF143975 6 373 1.2E-136 T 25-04-2017 CLFO_RS01605 404fdf5d274441ad85c17ebac522b2a2 556 SUPERFAMILY SSF52016 374 555 1.26E-64 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS01605 404fdf5d274441ad85c17ebac522b2a2 556 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 15 555 1.9E-240 T 25-04-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS01605 404fdf5d274441ad85c17ebac522b2a2 556 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 120 130 - T 25-04-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS10945 73123592b733b320df10b4263fec7505 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.77 T 25-04-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CLFO_RS10945 73123592b733b320df10b4263fec7505 185 Pfam PF01765 Ribosome recycling factor 20 183 3.5E-65 T 25-04-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CLFO_RS10945 73123592b733b320df10b4263fec7505 185 Gene3D G3DSA:1.10.132.20 66 185 5.0E-44 T 25-04-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CLFO_RS10945 73123592b733b320df10b4263fec7505 185 SUPERFAMILY SSF55194 6 184 5.89E-71 T 25-04-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CLFO_RS10945 73123592b733b320df10b4263fec7505 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 5.2E-72 T 25-04-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CLFO_RS11620 b194eff2eee40e15a812807bdefac8ae 466 SUPERFAMILY SSF50156 31 121 2.89E-11 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS11620 b194eff2eee40e15a812807bdefac8ae 466 SMART SM00228 18 84 0.0022 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS11620 b194eff2eee40e15a812807bdefac8ae 466 SUPERFAMILY SSF102114 114 278 3.34E-12 T 25-04-2017 CLFO_RS11620 b194eff2eee40e15a812807bdefac8ae 466 Gene3D G3DSA:3.20.20.70 155 291 2.9E-9 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS11620 b194eff2eee40e15a812807bdefac8ae 466 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 19 64 6.5E-7 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS11620 b194eff2eee40e15a812807bdefac8ae 466 Pfam PF04459 Protein of unknown function (DUF512) 247 451 1.1E-75 T 25-04-2017 IPR007549 Domain of unknown function DUF512 CLFO_RS11620 b194eff2eee40e15a812807bdefac8ae 466 Gene3D G3DSA:2.30.42.10 32 88 6.5E-9 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS09865 5ed5aaed8bea16077d557a9fc3c82e2e 188 Gene3D G3DSA:1.10.10.10 2 80 2.3E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09865 5ed5aaed8bea16077d557a9fc3c82e2e 188 PIRSF PIRSF019345 2 187 7.1E-58 T 25-04-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CLFO_RS09865 5ed5aaed8bea16077d557a9fc3c82e2e 188 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 172 1.8E-50 T 25-04-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CLFO_RS09865 5ed5aaed8bea16077d557a9fc3c82e2e 188 SUPERFAMILY SSF46785 85 158 3.13E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09865 5ed5aaed8bea16077d557a9fc3c82e2e 188 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 166 8.7E-58 T 25-04-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CLFO_RS09865 5ed5aaed8bea16077d557a9fc3c82e2e 188 SUPERFAMILY SSF46785 2 80 1.63E-18 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09865 5ed5aaed8bea16077d557a9fc3c82e2e 188 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 186 29.761 T 25-04-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CLFO_RS09865 5ed5aaed8bea16077d557a9fc3c82e2e 188 Gene3D G3DSA:1.10.10.10 84 158 1.4E-33 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS00450 13a2732e27c7dcc3a053a8945aebf5e7 347 Pfam PF03990 Domain of unknown function (DUF348) 41 80 9.3E-12 T 25-04-2017 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 CLFO_RS00450 13a2732e27c7dcc3a053a8945aebf5e7 347 Pfam PF03990 Domain of unknown function (DUF348) 103 137 3.4E-9 T 25-04-2017 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 CLFO_RS00450 13a2732e27c7dcc3a053a8945aebf5e7 347 Gene3D G3DSA:2.40.40.10 270 329 5.9E-6 T 25-04-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain CLFO_RS00450 13a2732e27c7dcc3a053a8945aebf5e7 347 SUPERFAMILY SSF50685 282 331 1.46E-9 T 25-04-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain CLFO_RS00450 13a2732e27c7dcc3a053a8945aebf5e7 347 SMART SM01208 151 229 1.6E-21 T 25-04-2017 IPR011098 G5 domain CLFO_RS00450 13a2732e27c7dcc3a053a8945aebf5e7 347 Pfam PF07501 G5 domain 155 227 1.7E-18 T 25-04-2017 IPR011098 G5 domain CLFO_RS00450 13a2732e27c7dcc3a053a8945aebf5e7 347 Pfam PF06725 3D domain 281 346 1.6E-20 T 25-04-2017 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CLFO_RS16120 da655aa296e1af9e6b8d3819e2e25e24 365 Gene3D G3DSA:3.40.50.720 184 307 3.6E-28 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16120 da655aa296e1af9e6b8d3819e2e25e24 365 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 147 2.0E-28 T 25-04-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLFO_RS16120 da655aa296e1af9e6b8d3819e2e25e24 365 Pfam PF00107 Zinc-binding dehydrogenase 190 323 3.5E-21 T 25-04-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLFO_RS16120 da655aa296e1af9e6b8d3819e2e25e24 365 SMART SM00829 10 360 4.9E-4 T 25-04-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CLFO_RS16120 da655aa296e1af9e6b8d3819e2e25e24 365 SUPERFAMILY SSF50129 2 169 1.67E-38 T 25-04-2017 IPR011032 GroES-like CLFO_RS16120 da655aa296e1af9e6b8d3819e2e25e24 365 SUPERFAMILY SSF51735 154 327 1.58E-33 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16120 da655aa296e1af9e6b8d3819e2e25e24 365 Gene3D G3DSA:3.90.180.10 2 183 1.5E-46 T 25-04-2017 IPR011032 GroES-like CLFO_RS19570 9b65a3739fb73317118774fc7a532494 132 PIRSF PIRSF002131 1 132 2.5E-53 T 25-04-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19570 9b65a3739fb73317118774fc7a532494 132 Pfam PF00411 Ribosomal protein S11 22 131 1.5E-49 T 25-04-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19570 9b65a3739fb73317118774fc7a532494 132 Gene3D G3DSA:3.30.420.80 9 132 2.8E-56 T 25-04-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19570 9b65a3739fb73317118774fc7a532494 132 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 6 132 34.456 T 25-04-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19570 9b65a3739fb73317118774fc7a532494 132 SUPERFAMILY SSF53137 17 132 2.83E-50 T 25-04-2017 CLFO_RS19570 9b65a3739fb73317118774fc7a532494 132 ProSitePatterns PS00054 Ribosomal protein S11 signature. 100 122 - T 25-04-2017 IPR018102 Ribosomal S11, conserved site CLFO_RS19570 9b65a3739fb73317118774fc7a532494 132 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 13 129 3.8E-60 T 25-04-2017 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS06810 725eed8865216d9aa24854cb13152c49 309 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 306 1.2E-101 T 25-04-2017 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 CLFO_RS06810 725eed8865216d9aa24854cb13152c49 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 25-04-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLFO_RS06810 725eed8865216d9aa24854cb13152c49 309 PIRSF PIRSF000535 1 308 2.4E-87 T 25-04-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CLFO_RS06810 725eed8865216d9aa24854cb13152c49 309 SUPERFAMILY SSF53613 1 294 6.55E-72 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS06810 725eed8865216d9aa24854cb13152c49 309 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 306 3.5E-102 T 25-04-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CLFO_RS06810 725eed8865216d9aa24854cb13152c49 309 Pfam PF00294 pfkB family carbohydrate kinase 7 290 1.7E-59 T 25-04-2017 IPR011611 Carbohydrate kinase PfkB CLFO_RS06810 725eed8865216d9aa24854cb13152c49 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 25-04-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLFO_RS06810 725eed8865216d9aa24854cb13152c49 309 Gene3D G3DSA:3.40.1190.20 32 308 1.8E-78 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS14605 073e6629f987b183b95d06e1d728a634 222 Pfam PF02254 TrkA-N domain 3 119 8.6E-23 T 25-04-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CLFO_RS14605 073e6629f987b183b95d06e1d728a634 222 Pfam PF02080 TrkA-C domain 150 213 5.7E-12 T 25-04-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLFO_RS14605 073e6629f987b183b95d06e1d728a634 222 Gene3D G3DSA:3.30.70.1450 149 217 2.1E-8 T 25-04-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLFO_RS14605 073e6629f987b183b95d06e1d728a634 222 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.0E-11 T 25-04-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLFO_RS14605 073e6629f987b183b95d06e1d728a634 222 PRINTS PR00335 TrkA potassium uptake protein signature 61 71 4.0E-11 T 25-04-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLFO_RS14605 073e6629f987b183b95d06e1d728a634 222 PRINTS PR00335 TrkA potassium uptake protein signature 50 60 4.0E-11 T 25-04-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLFO_RS14605 073e6629f987b183b95d06e1d728a634 222 PRINTS PR00335 TrkA potassium uptake protein signature 74 88 4.0E-11 T 25-04-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLFO_RS14605 073e6629f987b183b95d06e1d728a634 222 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.0E-11 T 25-04-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLFO_RS14605 073e6629f987b183b95d06e1d728a634 222 Gene3D G3DSA:3.40.50.720 1 147 1.5E-38 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14605 073e6629f987b183b95d06e1d728a634 222 SUPERFAMILY SSF116726 133 215 2.09E-13 T 25-04-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLFO_RS14605 073e6629f987b183b95d06e1d728a634 222 SUPERFAMILY SSF51735 1 146 3.61E-32 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS12565 32ffc813f1b8b12c5ff7630b483c067a 223 SMART SM00382 32 217 6.6E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12565 32ffc813f1b8b12c5ff7630b483c067a 223 Gene3D G3DSA:3.40.50.300 2 222 2.5E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12565 32ffc813f1b8b12c5ff7630b483c067a 223 SUPERFAMILY SSF52540 3 222 1.86E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12565 32ffc813f1b8b12c5ff7630b483c067a 223 Pfam PF00005 ABC transporter 23 171 3.0E-33 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS12565 32ffc813f1b8b12c5ff7630b483c067a 223 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS03670 e78dda0a724a8efa28ff35eeba7bbbc7 419 Pfam PF00909 Ammonium Transporter Family 13 405 3.3E-131 T 25-04-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CLFO_RS03670 e78dda0a724a8efa28ff35eeba7bbbc7 419 TIGRFAM TIGR00836 amt: ammonium transporter 10 405 1.5E-138 T 25-04-2017 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CLFO_RS03670 e78dda0a724a8efa28ff35eeba7bbbc7 419 SUPERFAMILY SSF111352 8 386 3.01E-119 T 25-04-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CLFO_RS03670 e78dda0a724a8efa28ff35eeba7bbbc7 419 Gene3D G3DSA:1.10.3430.10 6 386 7.0E-133 T 25-04-2017 IPR029020 Ammonium/urea transporter CLFO_RS03670 e78dda0a724a8efa28ff35eeba7bbbc7 419 ProSitePatterns PS01219 Ammonium transporters signature. 159 184 - T 25-04-2017 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CLFO_RS05275 d392ec7aec955e20c66d12f94666daa3 362 Pfam PF00188 Cysteine-rich secretory protein family 244 358 7.0E-16 T 25-04-2017 IPR014044 CAP domain CLFO_RS05275 d392ec7aec955e20c66d12f94666daa3 362 Pfam PF14504 CAP-associated N-terminal 90 224 7.0E-40 T 25-04-2017 IPR029410 CAP-associated domain CLFO_RS05275 d392ec7aec955e20c66d12f94666daa3 362 SUPERFAMILY SSF55797 237 360 2.79E-24 T 25-04-2017 IPR014044 CAP domain CLFO_RS05275 d392ec7aec955e20c66d12f94666daa3 362 Gene3D G3DSA:3.40.33.10 236 360 1.4E-11 T 25-04-2017 IPR014044 CAP domain CLFO_RS11460 06adef12c8775a102ef619bf84c86fb9 306 SUPERFAMILY SSF55174 15 101 7.57E-11 T 25-04-2017 CLFO_RS11460 06adef12c8775a102ef619bf84c86fb9 306 SMART SM00363 15 79 2.7E-10 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS11460 06adef12c8775a102ef619bf84c86fb9 306 SUPERFAMILY SSF55120 74 302 4.93E-76 T 25-04-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS11460 06adef12c8775a102ef619bf84c86fb9 306 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 301 2.5E-103 T 25-04-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS11460 06adef12c8775a102ef619bf84c86fb9 306 Pfam PF01479 S4 domain 16 61 9.7E-9 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS11460 06adef12c8775a102ef619bf84c86fb9 306 Gene3D G3DSA:3.10.290.10 15 63 1.6E-13 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS11460 06adef12c8775a102ef619bf84c86fb9 306 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 25-04-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS11460 06adef12c8775a102ef619bf84c86fb9 306 Pfam PF00849 RNA pseudouridylate synthase 88 242 7.5E-34 T 25-04-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS20300 29ab7aa88d7ae50f81593a960e076d13 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 25-04-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CLFO_RS20300 29ab7aa88d7ae50f81593a960e076d13 434 SUPERFAMILY SSF55347 137 302 6.21E-57 T 25-04-2017 CLFO_RS20300 29ab7aa88d7ae50f81593a960e076d13 434 SUPERFAMILY SSF55021 347 417 2.42E-12 T 25-04-2017 CLFO_RS20300 29ab7aa88d7ae50f81593a960e076d13 434 SUPERFAMILY SSF51735 1 158 2.88E-38 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS20300 29ab7aa88d7ae50f81593a960e076d13 434 Gene3D G3DSA:3.30.360.10 149 299 3.9E-61 T 25-04-2017 CLFO_RS20300 29ab7aa88d7ae50f81593a960e076d13 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 4.2E-22 T 25-04-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CLFO_RS20300 29ab7aa88d7ae50f81593a960e076d13 434 Gene3D G3DSA:3.40.50.720 1 148 7.1E-55 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS20300 29ab7aa88d7ae50f81593a960e076d13 434 PIRSF PIRSF000098 1 427 4.2E-172 T 25-04-2017 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CLFO_RS20300 29ab7aa88d7ae50f81593a960e076d13 434 Pfam PF00742 Homoserine dehydrogenase 137 315 2.0E-69 T 25-04-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CLFO_RS20300 29ab7aa88d7ae50f81593a960e076d13 434 Pfam PF01842 ACT domain 348 409 2.2E-13 T 25-04-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CLFO_RS20300 29ab7aa88d7ae50f81593a960e076d13 434 Gene3D G3DSA:3.30.70.260 347 417 2.2E-8 T 25-04-2017 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 327 1.1E-80 T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1100 1117 - T 25-04-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 SUPERFAMILY SSF52440 5 118 5.61E-45 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 SUPERFAMILY SSF51230 1065 1143 8.51E-20 T 25-04-2017 IPR011053 Single hybrid motif CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Pfam PF00364 Biotin-requiring enzyme 1079 1143 5.3E-15 T 25-04-2017 IPR000089 Biotin/lipoyl attachment CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 8 1143 0.0 T 25-04-2017 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Gene3D G3DSA:2.40.50.100 1069 1144 2.0E-22 T 25-04-2017 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 SMART SM00878 347 454 5.2E-49 T 25-04-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Gene3D G3DSA:3.40.50.20 6 134 7.0E-53 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 SUPERFAMILY SSF51569 522 833 6.41E-83 T 25-04-2017 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 SUPERFAMILY SSF56059 88 339 1.06E-68 T 25-04-2017 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Gene3D G3DSA:3.30.470.20 208 459 9.1E-97 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Gene3D G3DSA:3.10.600.10 985 1058 1.2E-29 T 25-04-2017 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 PIRSF PIRSF001594 1 1145 0.0 T 25-04-2017 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Pfam PF02436 Conserved carboxylase domain 825 1025 8.7E-73 T 25-04-2017 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 SUPERFAMILY SSF89000 830 1006 3.22E-56 T 25-04-2017 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Gene3D G3DSA:3.30.1490.20 135 207 3.2E-31 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Gene3D G3DSA:3.20.20.70 507 816 4.2E-136 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Pfam PF00682 HMGL-like 531 802 5.0E-32 T 25-04-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 158 172 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Pfam PF02785 Biotin carboxylase C-terminal domain 347 454 3.7E-31 T 25-04-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 SUPERFAMILY SSF51246 341 459 2.2E-35 T 25-04-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 115 8.0E-44 T 25-04-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS02995 891c947c249fdbca88d26fb1a4b5c934 1146 Gene3D G3DSA:1.10.10.60 948 984 5.6E-17 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS20720 f29664757307e6a64f8460e9fa397dc1 229 SMART SM00363 1 59 2.8E-11 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS20720 f29664757307e6a64f8460e9fa397dc1 229 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 96 110 - T 25-04-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLFO_RS20720 f29664757307e6a64f8460e9fa397dc1 229 SUPERFAMILY SSF55174 1 53 1.03E-12 T 25-04-2017 CLFO_RS20720 f29664757307e6a64f8460e9fa397dc1 229 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 218 2.3E-48 T 25-04-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLFO_RS20720 f29664757307e6a64f8460e9fa397dc1 229 Pfam PF01479 S4 domain 1 46 8.7E-11 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS20720 f29664757307e6a64f8460e9fa397dc1 229 SUPERFAMILY SSF55120 60 221 1.25E-40 T 25-04-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS20720 f29664757307e6a64f8460e9fa397dc1 229 Gene3D G3DSA:3.10.290.10 1 61 8.9E-19 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS20720 f29664757307e6a64f8460e9fa397dc1 229 Pfam PF00849 RNA pseudouridylate synthase 61 186 3.4E-15 T 25-04-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 512 615 7.1E-26 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 Pfam PF00989 PAS fold 271 381 2.4E-13 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 Gene3D G3DSA:3.30.450.20 268 385 2.7E-17 T 25-04-2017 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 SUPERFAMILY SSF55874 447 614 2.49E-48 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 SUPERFAMILY SSF158472 208 254 2.22E-9 T 25-04-2017 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 596 1.9E-19 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 557 1.9E-19 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 571 1.9E-19 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 615 1.9E-19 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 SMART SM00304 205 257 3.0E-9 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 SMART SM00387 504 618 3.0E-34 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 Pfam PF00672 HAMP domain 188 252 4.3E-12 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 SUPERFAMILY SSF47384 374 459 4.12E-22 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 SMART SM00091 268 334 7.7E-10 T 25-04-2017 IPR000014 PAS domain CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 Pfam PF00512 His Kinase A (phospho-acceptor) domain 390 458 1.3E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 SMART SM00388 390 458 1.5E-22 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 Gene3D G3DSA:1.10.287.130 386 443 1.2E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 Gene3D G3DSA:3.30.565.10 444 616 1.5E-47 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 269 389 5.1E-13 T 25-04-2017 IPR000014 PAS domain CLFO_RS14625 81e79114be2c9450b14473eb88e35a6a 619 SUPERFAMILY SSF55785 261 382 7.68E-14 T 25-04-2017 IPR000014 PAS domain CLFO_RS01050 3dfae1232845efe8198fdcd4c9dfb33d 274 Pfam PF08680 TATA-box binding 126 274 1.7E-26 T 25-04-2017 IPR014794 TATA-box binding CLFO_RS01050 3dfae1232845efe8198fdcd4c9dfb33d 274 Gene3D G3DSA:3.30.360.40 203 274 1.6E-17 T 25-04-2017 CLFO_RS01050 3dfae1232845efe8198fdcd4c9dfb33d 274 SUPERFAMILY SSF143842 127 271 4.32E-30 T 25-04-2017 IPR014794 TATA-box binding CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 Pfam PF00158 Sigma-54 interaction domain 141 308 1.0E-74 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 SUPERFAMILY SSF52540 141 384 1.43E-79 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 Gene3D G3DSA:3.40.50.300 139 313 8.3E-63 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 Pfam PF02954 Bacterial regulatory protein, Fis family 406 445 8.9E-13 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 Gene3D G3DSA:1.10.10.60 404 448 8.1E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 SUPERFAMILY SSF52172 1 185 1.57E-49 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 SMART SM00448 2 113 7.4E-43 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 SUPERFAMILY SSF46689 354 447 2.54E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 2.4E-11 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 2.4E-11 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 Gene3D G3DSA:3.40.50.2300 3 130 2.9E-41 T 25-04-2017 CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 Pfam PF00072 Response regulator receiver domain 4 112 3.6E-34 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 SMART SM00382 161 304 6.3E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS17715 ac056ceb7266503305ce388c6ef6b857 450 Gene3D G3DSA:1.10.8.60 314 392 1.7E-29 T 25-04-2017 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 SMART SM00304 195 247 2.5E-11 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 546 1.1E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 1.1E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 532 1.1E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 1.1E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 Pfam PF00672 HAMP domain 178 243 3.1E-17 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 SMART SM00388 368 435 3.1E-20 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 Pfam PF00989 PAS fold 255 359 2.6E-6 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 368 433 1.4E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 Gene3D G3DSA:3.30.565.10 422 593 1.3E-53 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 SUPERFAMILY SSF158472 196 244 2.22E-10 T 25-04-2017 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 SMART SM00387 481 594 4.8E-44 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 SUPERFAMILY SSF47384 353 434 1.02E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 SUPERFAMILY SSF55874 424 592 3.01E-48 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 593 1.2E-28 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 Gene3D G3DSA:1.10.287.130 366 421 9.6E-21 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 SUPERFAMILY SSF55785 242 360 1.08E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 SMART SM00091 254 320 7.8E-5 T 25-04-2017 IPR000014 PAS domain CLFO_RS20995 e17c9a420b14fcb03dbf76323aaa01f4 600 Gene3D G3DSA:3.30.450.20 254 365 3.4E-11 T 25-04-2017 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 25-04-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 Pfam PF02803 Thiolase, C-terminal domain 271 392 8.0E-53 T 25-04-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 Gene3D G3DSA:3.40.47.10 277 391 5.8E-73 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 Gene3D G3DSA:3.40.47.10 142 193 5.8E-73 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 SUPERFAMILY SSF53901 4 270 2.05E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 SUPERFAMILY SSF53901 271 391 2.45E-45 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 Gene3D G3DSA:3.40.47.10 4 123 9.8E-78 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 Gene3D G3DSA:3.40.47.10 194 276 9.8E-78 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 PIRSF PIRSF000429 1 392 1.0E-138 T 25-04-2017 IPR002155 Thiolase GO:0008152|GO:0016747 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 25-04-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 25-04-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 2.1E-152 T 25-04-2017 IPR002155 Thiolase GO:0008152|GO:0016747 CLFO_RS15235 e4a5887cbb638a5826a4f2ccba4c6558 392 Pfam PF00108 Thiolase, N-terminal domain 4 263 8.0E-108 T 25-04-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CLFO_RS12375 f3fc06b3d3656c351eb2ab87eaf20fd3 212 Pfam PF08279 HTH domain 9 61 4.6E-12 T 25-04-2017 IPR013196 Helix-turn-helix, type 11 CLFO_RS12375 f3fc06b3d3656c351eb2ab87eaf20fd3 212 Pfam PF00571 CBS domain 80 130 4.2E-7 T 25-04-2017 IPR000644 CBS domain CLFO_RS12375 f3fc06b3d3656c351eb2ab87eaf20fd3 212 Pfam PF00571 CBS domain 146 206 1.0E-5 T 25-04-2017 IPR000644 CBS domain CLFO_RS12375 f3fc06b3d3656c351eb2ab87eaf20fd3 212 Gene3D G3DSA:3.10.580.10 78 208 6.8E-21 T 25-04-2017 CLFO_RS12375 f3fc06b3d3656c351eb2ab87eaf20fd3 212 SMART SM00116 86 133 0.018 T 25-04-2017 IPR000644 CBS domain CLFO_RS12375 f3fc06b3d3656c351eb2ab87eaf20fd3 212 SMART SM00116 152 207 3.5E-4 T 25-04-2017 IPR000644 CBS domain CLFO_RS12375 f3fc06b3d3656c351eb2ab87eaf20fd3 212 SUPERFAMILY SSF54631 71 208 4.27E-23 T 25-04-2017 CLFO_RS12375 f3fc06b3d3656c351eb2ab87eaf20fd3 212 SUPERFAMILY SSF46785 6 66 2.27E-12 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12375 f3fc06b3d3656c351eb2ab87eaf20fd3 212 PIRSF PIRSF026546 4 212 6.2E-89 T 25-04-2017 IPR016842 Protein of unknown function UCP026546, HtH-CBS CLFO_RS12375 f3fc06b3d3656c351eb2ab87eaf20fd3 212 Gene3D G3DSA:1.10.10.10 4 64 1.6E-15 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 Gene3D G3DSA:1.10.1040.10 169 277 3.1E-34 T 25-04-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 152 6.9E-47 T 25-04-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 298 3.0E-125 T 25-04-2017 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 SMART SM01350 167 298 1.7E-6 T 25-04-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 SUPERFAMILY SSF51735 1 153 1.84E-49 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 231 258 4.7E-34 T 25-04-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 22 4.7E-34 T 25-04-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 156 184 4.7E-34 T 25-04-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 59 88 4.7E-34 T 25-04-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 SUPERFAMILY SSF48179 165 297 9.64E-41 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 167 277 5.4E-23 T 25-04-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 235 247 - T 25-04-2017 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CLFO_RS12035 95202836ea6b205a2a4685cb1df29e4d 298 Gene3D G3DSA:3.40.50.720 1 168 7.5E-49 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04370 fa43b91c65766354af8a4e09a2864a7d 448 Pfam PF14620 YpeB sporulation 13 371 6.6E-121 T 25-04-2017 IPR014239 Spore germination YpeB GO:0009847 CLFO_RS04370 fa43b91c65766354af8a4e09a2864a7d 448 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 5 436 2.6E-124 T 25-04-2017 IPR014239 Spore germination YpeB GO:0009847 CLFO_RS04370 fa43b91c65766354af8a4e09a2864a7d 448 Pfam PF03413 Peptidase propeptide and YPEB domain 376 432 4.7E-4 T 25-04-2017 IPR025711 PepSY domain CLFO_RS20210 ceaae081ca5c6b6633a6568a12531d97 333 SUPERFAMILY SSF53850 45 330 1.01E-58 T 25-04-2017 CLFO_RS20210 ceaae081ca5c6b6633a6568a12531d97 333 Pfam PF12849 PBP superfamily domain 45 271 1.8E-19 T 25-04-2017 IPR024370 PBP domain CLFO_RS20210 ceaae081ca5c6b6633a6568a12531d97 333 Gene3D G3DSA:3.40.190.10 49 144 1.8E-16 T 25-04-2017 CLFO_RS20210 ceaae081ca5c6b6633a6568a12531d97 333 Gene3D G3DSA:3.40.190.10 145 265 1.5E-20 T 25-04-2017 CLFO_RS20210 ceaae081ca5c6b6633a6568a12531d97 333 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 3 316 5.4E-69 T 25-04-2017 IPR011862 Phosphate binding protein GO:0006810 CLFO_RS17105 765a361fe795668917a3ed3ce3dc8c95 607 Gene3D G3DSA:1.25.40.10 6 47 1.4E-5 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS17105 765a361fe795668917a3ed3ce3dc8c95 607 SUPERFAMILY SSF48452 5 55 2.71E-5 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS17105 765a361fe795668917a3ed3ce3dc8c95 607 Pfam PF01844 HNH endonuclease 433 478 5.7E-8 T 25-04-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CLFO_RS17105 765a361fe795668917a3ed3ce3dc8c95 607 SMART SM00507 423 478 6.3E-5 T 25-04-2017 IPR003615 HNH nuclease CLFO_RS07200 47b9e36dca5e67f6db117044f233657f 296 SUPERFAMILY SSF111331 1 296 3.4E-73 T 25-04-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain CLFO_RS07200 47b9e36dca5e67f6db117044f233657f 296 Gene3D G3DSA:3.40.50.10330 16 86 8.1E-5 T 25-04-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLFO_RS07200 47b9e36dca5e67f6db117044f233657f 296 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 126 1.0E-27 T 25-04-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CLFO_RS07200 47b9e36dca5e67f6db117044f233657f 296 SMART SM00046 3 131 9.6E-9 T 25-04-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CLFO_RS07200 47b9e36dca5e67f6db117044f233657f 296 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 296 3.5E-65 T 25-04-2017 IPR005218 Diacylglycerol/lipid kinase CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 Gene3D G3DSA:1.10.287.380 808 864 7.1E-6 T 25-04-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 Gene3D G3DSA:3.90.740.10 197 338 1.6E-52 T 25-04-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 SUPERFAMILY SSF52374 343 575 5.12E-150 T 25-04-2017 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 SUPERFAMILY SSF52374 3 195 5.12E-150 T 25-04-2017 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 Gene3D G3DSA:3.40.50.620 6 196 7.8E-149 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 Gene3D G3DSA:3.40.50.620 343 564 7.8E-149 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 TIGRFAM TIGR00422 valS: valine--tRNA ligase 5 861 0.0 T 25-04-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 SUPERFAMILY SSF50677 194 343 2.09E-63 T 25-04-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 Hamap MF_02004 Valine--tRNA ligase [valS]. 4 880 16.073 T 25-04-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 Pfam PF08264 Anticodon-binding domain of tRNA 608 754 1.0E-47 T 25-04-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 SUPERFAMILY SSF47323 577 830 3.92E-74 T 25-04-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 SUPERFAMILY SSF46589 815 879 9.94E-17 T 25-04-2017 IPR010978 tRNA-binding arm GO:0000166 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 25-04-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 2.8E-38 T 25-04-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 PRINTS PR00986 Valyl-tRNA synthetase signature 477 495 2.8E-38 T 25-04-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 PRINTS PR00986 Valyl-tRNA synthetase signature 348 361 2.8E-38 T 25-04-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 2.8E-38 T 25-04-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 PRINTS PR00986 Valyl-tRNA synthetase signature 446 467 2.8E-38 T 25-04-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 815 879 9.9E-20 T 25-04-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 Gene3D G3DSA:1.10.730.10 565 746 1.0E-68 T 25-04-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS04505 bf8e730c33d0868a7c0709b267593bae 883 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 564 9.7E-216 T 25-04-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 SMART SM00956 405 508 5.6E-44 T 25-04-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 Gene3D G3DSA:3.40.50.300 3 196 5.1E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 Pfam PF14493 Helix-turn-helix domain 625 713 2.4E-25 T 25-04-2017 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 SMART SM00341 528 608 4.8E-16 T 25-04-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 Gene3D G3DSA:3.40.50.300 198 335 4.1E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 601 1.0E-226 T 25-04-2017 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 Pfam PF00271 Helicase conserved C-terminal domain 214 322 6.0E-21 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 Pfam PF00570 HRDC domain 532 598 9.0E-19 T 25-04-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 SUPERFAMILY SSF52540 56 341 1.08E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 Gene3D G3DSA:1.10.150.80 530 606 2.1E-25 T 25-04-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 Gene3D G3DSA:1.10.10.10 336 509 2.2E-53 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 SMART SM00490 242 323 1.8E-28 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 SMART SM00487 12 209 4.4E-29 T 25-04-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 Pfam PF00270 DEAD/DEAH box helicase 19 178 2.5E-18 T 25-04-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 Pfam PF16124 RecQ zinc-binding 335 398 1.4E-14 T 25-04-2017 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 SUPERFAMILY SSF47819 530 606 4.14E-24 T 25-04-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 457 1.7E-147 T 25-04-2017 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 SUPERFAMILY SSF46785 396 517 1.41E-36 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06920 0714ae52d5288ad666376e3ee31fb586 718 Pfam PF09382 RQC domain 401 509 3.2E-35 T 25-04-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CLFO_RS02115 26794db8236d6d641bc9b16c0962837a 235 Pfam PF02811 PHP domain 6 127 5.6E-8 T 25-04-2017 IPR004013 PHP domain GO:0003824 CLFO_RS02115 26794db8236d6d641bc9b16c0962837a 235 SMART SM00481 5 79 2.5E-10 T 25-04-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLFO_RS02115 26794db8236d6d641bc9b16c0962837a 235 Gene3D G3DSA:3.20.20.140 5 233 2.5E-62 T 25-04-2017 CLFO_RS02115 26794db8236d6d641bc9b16c0962837a 235 SUPERFAMILY SSF89550 5 232 7.85E-62 T 25-04-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLFO_RS03095 4cbfac51c8c4f41114f02869191df426 255 SMART SM00448 3 121 4.9E-7 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS03095 4cbfac51c8c4f41114f02869191df426 255 Pfam PF00072 Response regulator receiver domain 6 116 2.0E-12 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS03095 4cbfac51c8c4f41114f02869191df426 255 SMART SM00850 149 247 2.1E-8 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS03095 4cbfac51c8c4f41114f02869191df426 255 Gene3D G3DSA:2.40.50.40 144 213 6.2E-7 T 25-04-2017 CLFO_RS03095 4cbfac51c8c4f41114f02869191df426 255 SUPERFAMILY SSF52172 6 165 1.37E-17 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS03095 4cbfac51c8c4f41114f02869191df426 255 Gene3D G3DSA:3.40.50.2300 6 130 3.7E-18 T 25-04-2017 CLFO_RS03095 4cbfac51c8c4f41114f02869191df426 255 Pfam PF04397 LytTr DNA-binding domain 157 240 3.6E-10 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS09265 3494d9e39f3eaafb595fe51afeebe59c 410 Pfam PF01594 Domain of unknown function DUF20 70 399 1.2E-73 T 25-04-2017 IPR002549 Transmembrane protein TqsA-like CLFO_RS19615 8ed1c9c14c8ba20f3611d2512eb6004d 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 25-04-2017 IPR018038 Ribosomal protein L30, conserved site CLFO_RS19615 8ed1c9c14c8ba20f3611d2512eb6004d 59 PIRSF PIRSF002211 1 59 6.3E-26 T 25-04-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CLFO_RS19615 8ed1c9c14c8ba20f3611d2512eb6004d 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 17.873 T 25-04-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CLFO_RS19615 8ed1c9c14c8ba20f3611d2512eb6004d 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 58 9.4E-25 T 25-04-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CLFO_RS19615 8ed1c9c14c8ba20f3611d2512eb6004d 59 Gene3D G3DSA:3.30.1390.20 1 58 1.5E-26 T 25-04-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CLFO_RS19615 8ed1c9c14c8ba20f3611d2512eb6004d 59 Pfam PF00327 Ribosomal protein L30p/L7e 6 54 5.3E-18 T 25-04-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CLFO_RS19615 8ed1c9c14c8ba20f3611d2512eb6004d 59 SUPERFAMILY SSF55129 5 58 3.79E-18 T 25-04-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 2.5E-5 T 25-04-2017 CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 6.2E-109 T 25-04-2017 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 SUPERFAMILY SSF51735 4 246 2.33E-95 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 25-04-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 Gene3D G3DSA:3.40.50.720 2 246 2.9E-99 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.1E-17 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.1E-17 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.1E-17 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.8E-49 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.8E-49 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.8E-49 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.8E-49 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-49 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.8E-49 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS11270 72140da7daf593cff9a4450614b1828f 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 245 6.1E-74 T 25-04-2017 CLFO_RS10555 7a168881df95df01f679a5556d055911 204 SUPERFAMILY SSF54060 124 189 7.53E-13 T 25-04-2017 CLFO_RS10555 7a168881df95df01f679a5556d055911 204 Pfam PF13392 HNH endonuclease 144 189 4.2E-13 T 25-04-2017 IPR003615 HNH nuclease CLFO_RS14400 f75268b67174a21592935dded33973ce 381 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 22 5.1E-10 T 25-04-2017 IPR027399 Alcohol dehydrogenase GroES-associated CLFO_RS14400 f75268b67174a21592935dded33973ce 381 Gene3D G3DSA:3.90.180.10 1 179 2.5E-55 T 25-04-2017 IPR011032 GroES-like CLFO_RS14400 f75268b67174a21592935dded33973ce 381 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 25-04-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CLFO_RS14400 f75268b67174a21592935dded33973ce 381 Gene3D G3DSA:3.40.50.720 180 334 1.0E-46 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14400 f75268b67174a21592935dded33973ce 381 SUPERFAMILY SSF50129 1 177 2.28E-60 T 25-04-2017 IPR011032 GroES-like CLFO_RS14400 f75268b67174a21592935dded33973ce 381 SUPERFAMILY SSF51735 156 340 1.17E-47 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14400 f75268b67174a21592935dded33973ce 381 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 140 1.7E-30 T 25-04-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLFO_RS14400 f75268b67174a21592935dded33973ce 381 Pfam PF00107 Zinc-binding dehydrogenase 189 258 1.6E-9 T 25-04-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 Pfam PF02954 Bacterial regulatory protein, Fis family 582 617 3.0E-9 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 Gene3D G3DSA:1.10.8.60 488 557 1.1E-22 T 25-04-2017 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 338 351 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 SMART SM00091 190 255 0.0096 T 25-04-2017 IPR000014 PAS domain CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 Pfam PF00158 Sigma-54 interaction domain 314 481 3.8E-67 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 SUPERFAMILY SSF46689 528 618 8.36E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 Pfam PF06506 Propionate catabolism activator 26 185 2.3E-36 T 25-04-2017 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 Gene3D G3DSA:3.30.450.20 190 286 2.5E-6 T 25-04-2017 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 SUPERFAMILY SSF159800 4 179 6.54E-37 T 25-04-2017 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 Gene3D G3DSA:3.40.50.300 311 487 6.5E-54 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 528 537 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 SUPERFAMILY SSF55785 185 285 5.93E-6 T 25-04-2017 IPR000014 PAS domain CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 Gene3D G3DSA:3.40.50.10660 77 161 9.1E-11 T 25-04-2017 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 SUPERFAMILY SSF52540 314 556 3.04E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 SMART SM00382 334 479 8.9E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 Gene3D G3DSA:1.10.10.60 577 617 3.6E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 Gene3D G3DSA:3.40.50.2300 163 186 3.4E-12 T 25-04-2017 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 Gene3D G3DSA:3.40.50.2300 4 76 3.4E-12 T 25-04-2017 CLFO_RS02595 c2a3205e824ccb00d607ca03cd4ffe13 621 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 401 416 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS17045 20ba8a7440840b7412bd7d27cf125d80 192 SMART SM00267 23 191 1.9E-28 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS17045 20ba8a7440840b7412bd7d27cf125d80 192 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 32 190 1.1E-37 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS17045 20ba8a7440840b7412bd7d27cf125d80 192 Gene3D G3DSA:3.30.70.270 36 189 3.6E-38 T 25-04-2017 CLFO_RS17045 20ba8a7440840b7412bd7d27cf125d80 192 Pfam PF00990 Diguanylate cyclase, GGDEF domain 34 190 4.4E-35 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS17045 20ba8a7440840b7412bd7d27cf125d80 192 SUPERFAMILY SSF55073 39 188 2.43E-35 T 25-04-2017 IPR029787 Nucleotide cyclase CLFO_RS17820 2973f9202099827fa8efd2589887b26c 390 Gene3D G3DSA:3.10.580.10 272 388 1.4E-19 T 25-04-2017 CLFO_RS17820 2973f9202099827fa8efd2589887b26c 390 Pfam PF00005 ABC transporter 44 192 7.1E-36 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS17820 2973f9202099827fa8efd2589887b26c 390 Pfam PF00571 CBS domain 286 331 6.3E-7 T 25-04-2017 IPR000644 CBS domain CLFO_RS17820 2973f9202099827fa8efd2589887b26c 390 SMART SM00382 53 250 8.9E-20 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS17820 2973f9202099827fa8efd2589887b26c 390 SUPERFAMILY SSF52540 32 269 1.06E-78 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17820 2973f9202099827fa8efd2589887b26c 390 Gene3D G3DSA:3.40.50.300 26 266 3.3E-81 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17820 2973f9202099827fa8efd2589887b26c 390 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS17820 2973f9202099827fa8efd2589887b26c 390 SUPERFAMILY SSF54631 275 387 5.31E-20 T 25-04-2017 CLFO_RS17820 2973f9202099827fa8efd2589887b26c 390 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 387 1.6E-135 T 25-04-2017 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 CLFO_RS17820 2973f9202099827fa8efd2589887b26c 390 SMART SM00116 343 390 20.0 T 25-04-2017 IPR000644 CBS domain CLFO_RS17820 2973f9202099827fa8efd2589887b26c 390 SMART SM00116 283 331 3.5E-4 T 25-04-2017 IPR000644 CBS domain CLFO_RS10080 8bc2c806a5837738ca7ef4fd3b1c179c 245 Pfam PF12833 Helix-turn-helix domain 165 242 4.7E-19 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS10080 8bc2c806a5837738ca7ef4fd3b1c179c 245 SMART SM00342 158 241 2.7E-27 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS10080 8bc2c806a5837738ca7ef4fd3b1c179c 245 SUPERFAMILY SSF46689 194 243 1.84E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS10080 8bc2c806a5837738ca7ef4fd3b1c179c 245 SUPERFAMILY SSF46689 142 191 7.31E-10 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS10080 8bc2c806a5837738ca7ef4fd3b1c179c 245 SUPERFAMILY SSF52172 3 129 1.71E-33 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS10080 8bc2c806a5837738ca7ef4fd3b1c179c 245 Gene3D G3DSA:3.40.50.2300 3 128 3.0E-34 T 25-04-2017 CLFO_RS10080 8bc2c806a5837738ca7ef4fd3b1c179c 245 Pfam PF00072 Response regulator receiver domain 5 116 2.7E-24 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS10080 8bc2c806a5837738ca7ef4fd3b1c179c 245 Gene3D G3DSA:1.10.10.60 195 244 2.2E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS10080 8bc2c806a5837738ca7ef4fd3b1c179c 245 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 195 237 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS10080 8bc2c806a5837738ca7ef4fd3b1c179c 245 SMART SM00448 2 116 9.1E-29 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS10080 8bc2c806a5837738ca7ef4fd3b1c179c 245 Gene3D G3DSA:1.10.10.60 140 194 7.0E-17 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS03410 c490c00b37c5410d0d3313d53354fe97 1932 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1622 1702 7.7E-24 T 25-04-2017 IPR022385 Rhs repeat-associated core GO:0097264 CLFO_RS03410 c490c00b37c5410d0d3313d53354fe97 1932 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1340 1381 0.0013 T 25-04-2017 IPR006530 YD repeat CLFO_RS03410 c490c00b37c5410d0d3313d53354fe97 1932 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1044 1077 0.0017 T 25-04-2017 IPR006530 YD repeat CLFO_RS03410 c490c00b37c5410d0d3313d53354fe97 1932 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1199 1229 5.8E-6 T 25-04-2017 IPR006530 YD repeat CLFO_RS03410 c490c00b37c5410d0d3313d53354fe97 1932 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1090 1126 7.8E-4 T 25-04-2017 IPR006530 YD repeat CLFO_RS03410 c490c00b37c5410d0d3313d53354fe97 1932 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1181 1219 4.2E-7 T 25-04-2017 IPR006530 YD repeat CLFO_RS03410 c490c00b37c5410d0d3313d53354fe97 1932 Pfam PF05593 RHS Repeat 1220 1264 1.4E-4 T 25-04-2017 IPR031325 RHS repeat CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 Gene3D G3DSA:3.50.50.60 101 299 2.7E-47 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 SUPERFAMILY SSF51905 1 300 1.85E-38 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 2.8E-7 T 25-04-2017 CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 2.8E-7 T 25-04-2017 CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 2.8E-7 T 25-04-2017 CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 2.8E-7 T 25-04-2017 CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 Gene3D G3DSA:3.50.50.60 1 100 4.0E-20 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 2.5E-19 T 25-04-2017 CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 115 2.5E-19 T 25-04-2017 CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 2.5E-19 T 25-04-2017 CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 2.5E-19 T 25-04-2017 CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 2.5E-19 T 25-04-2017 CLFO_RS08360 366c1c6b73ff2ec561c746f071e5fa0e 408 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 290 5.3E-49 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS00745 4b8f4d0dfcad59fb761da80a215f3b53 467 Pfam PF13727 CoA-binding domain 68 243 1.1E-29 T 25-04-2017 CLFO_RS00745 4b8f4d0dfcad59fb761da80a215f3b53 467 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 16 467 3.1E-149 T 25-04-2017 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CLFO_RS00745 4b8f4d0dfcad59fb761da80a215f3b53 467 Gene3D G3DSA:3.40.50.720 138 215 4.4E-4 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS00745 4b8f4d0dfcad59fb761da80a215f3b53 467 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 16 467 2.9E-159 T 25-04-2017 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 CLFO_RS00745 4b8f4d0dfcad59fb761da80a215f3b53 467 Pfam PF02397 Bacterial sugar transferase 280 459 2.8E-61 T 25-04-2017 IPR003362 Bacterial sugar transferase CLFO_RS04580 353d52d0e2283a492ddfd1d1f385f2c4 324 Gene3D G3DSA:1.10.3720.10 96 322 7.9E-20 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04580 353d52d0e2283a492ddfd1d1f385f2c4 324 SUPERFAMILY SSF161098 96 311 1.83E-20 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04580 353d52d0e2283a492ddfd1d1f385f2c4 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 323 1.3E-43 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS05350 86ce920cd3c8c57467b8d0acc717482f 261 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 2 191 3.7E-50 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS05350 86ce920cd3c8c57467b8d0acc717482f 261 SUPERFAMILY SSF53187 2 194 9.73E-47 T 25-04-2017 CLFO_RS05350 86ce920cd3c8c57467b8d0acc717482f 261 Gene3D G3DSA:3.40.630.40 2 194 4.3E-52 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS05350 86ce920cd3c8c57467b8d0acc717482f 261 SMART SM00646 61 191 3.3E-34 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS00155 6a9d7871b7f9529f5916e819de3964b0 200 Gene3D G3DSA:3.40.1260.10 130 186 2.0E-13 T 25-04-2017 IPR027396 DsrEFH-like CLFO_RS00155 6a9d7871b7f9529f5916e819de3964b0 200 Pfam PF02635 DsrE/DsrF-like family 130 198 1.7E-5 T 25-04-2017 IPR003787 Sulphur relay, DsrE/F-like protein CLFO_RS00155 6a9d7871b7f9529f5916e819de3964b0 200 Pfam PF01206 Sulfurtransferase TusA 3 65 1.5E-15 T 25-04-2017 IPR001455 TusA-like domain CLFO_RS00155 6a9d7871b7f9529f5916e819de3964b0 200 SUPERFAMILY SSF64307 2 68 1.44E-14 T 25-04-2017 IPR001455 TusA-like domain CLFO_RS00155 6a9d7871b7f9529f5916e819de3964b0 200 SUPERFAMILY SSF75169 93 199 1.18E-14 T 25-04-2017 IPR027396 DsrEFH-like CLFO_RS00155 6a9d7871b7f9529f5916e819de3964b0 200 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 5 29 - T 25-04-2017 IPR001455 TusA-like domain CLFO_RS00155 6a9d7871b7f9529f5916e819de3964b0 200 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 5 199 1.2E-69 T 25-04-2017 IPR019870 Selenium metabolism protein YedF CLFO_RS00155 6a9d7871b7f9529f5916e819de3964b0 200 Gene3D G3DSA:3.30.110.40 3 69 6.3E-16 T 25-04-2017 IPR001455 TusA-like domain CLFO_RS20050 1f7869039e2e037da79fab4c9974fdc3 66 SUPERFAMILY SSF47413 4 63 2.17E-13 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS20050 1f7869039e2e037da79fab4c9974fdc3 66 SMART SM00530 6 62 3.4E-11 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS20050 1f7869039e2e037da79fab4c9974fdc3 66 Gene3D G3DSA:1.10.260.40 4 63 1.4E-16 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS20050 1f7869039e2e037da79fab4c9974fdc3 66 Pfam PF12844 Helix-turn-helix domain 6 62 2.7E-10 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS19735 4658e3f85a0931287e0433e5408d3ed9 81 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 4 80 8.1E-11 T 25-04-2017 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 CLFO_RS19735 4658e3f85a0931287e0433e5408d3ed9 81 SUPERFAMILY SSF55315 2 80 1.66E-17 T 25-04-2017 IPR029064 50S ribosomal protein L30e-like CLFO_RS19735 4658e3f85a0931287e0433e5408d3ed9 81 Gene3D G3DSA:3.30.1330.30 2 79 2.6E-13 T 25-04-2017 IPR029064 50S ribosomal protein L30e-like CLFO_RS12785 8b16b6364bcb69a9b8262548986ed744 429 Pfam PF00152 tRNA synthetases class II (D, K and N) 110 422 2.9E-79 T 25-04-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS12785 8b16b6364bcb69a9b8262548986ed744 429 TIGRFAM TIGR00458 aspS_nondisc: aspartate--tRNA(Asn) ligase 12 429 2.9E-121 T 25-04-2017 IPR004523 Aspartyl-tRNA synthetase, archaeal-type GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLFO_RS12785 8b16b6364bcb69a9b8262548986ed744 429 PRINTS PR01042 Aspartyl-tRNA synthetase signature 344 360 3.1E-19 T 25-04-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS12785 8b16b6364bcb69a9b8262548986ed744 429 PRINTS PR01042 Aspartyl-tRNA synthetase signature 179 191 3.1E-19 T 25-04-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS12785 8b16b6364bcb69a9b8262548986ed744 429 PRINTS PR01042 Aspartyl-tRNA synthetase signature 384 398 3.1E-19 T 25-04-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS12785 8b16b6364bcb69a9b8262548986ed744 429 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 209 3.1E-19 T 25-04-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS12785 8b16b6364bcb69a9b8262548986ed744 429 SUPERFAMILY SSF55681 96 429 1.84E-86 T 25-04-2017 CLFO_RS12785 8b16b6364bcb69a9b8262548986ed744 429 Gene3D G3DSA:3.30.930.10 102 429 1.7E-96 T 25-04-2017 CLFO_RS12785 8b16b6364bcb69a9b8262548986ed744 429 SUPERFAMILY SSF50249 13 91 6.64E-15 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS12785 8b16b6364bcb69a9b8262548986ed744 429 Pfam PF01336 OB-fold nucleic acid binding domain 16 88 2.3E-10 T 25-04-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLFO_RS12785 8b16b6364bcb69a9b8262548986ed744 429 Gene3D G3DSA:2.40.50.140 12 91 1.3E-17 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS01365 08797133a93ceae101bc95168c325f09 166 Gene3D G3DSA:2.30.290.10 1 147 1.3E-57 T 25-04-2017 IPR024046 Flagellar assembly factor FliW domain CLFO_RS01365 08797133a93ceae101bc95168c325f09 166 Pfam PF02623 FliW protein 20 139 4.7E-46 T 25-04-2017 IPR003775 Flagellar assembly factor FliW GO:0044780 CLFO_RS01365 08797133a93ceae101bc95168c325f09 166 SUPERFAMILY SSF141457 1 145 1.11E-51 T 25-04-2017 IPR024046 Flagellar assembly factor FliW domain CLFO_RS01365 08797133a93ceae101bc95168c325f09 166 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 142 28.595 T 25-04-2017 IPR003775 Flagellar assembly factor FliW GO:0044780 CLFO_RS20775 15991284a2aa60280bfe809cff007e0a 428 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 250 417 4.7E-30 T 25-04-2017 IPR031475 Putative nucleotide-binding C-terminal domain CLFO_RS20775 15991284a2aa60280bfe809cff007e0a 428 Pfam PF07005 Putative sugar-binding N-terminal domain 5 228 4.7E-62 T 25-04-2017 IPR010737 Putative sugar-binding, N-terminal domain CLFO_RS20775 15991284a2aa60280bfe809cff007e0a 428 SUPERFAMILY SSF142764 5 423 2.48E-96 T 25-04-2017 CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 SUPERFAMILY SSF54631 78 138 1.3E-15 T 25-04-2017 CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 SUPERFAMILY SSF54631 216 292 1.3E-15 T 25-04-2017 CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 Pfam PF00571 CBS domain 240 291 1.4E-5 T 25-04-2017 IPR000644 CBS domain CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 Pfam PF00571 CBS domain 89 118 0.0015 T 25-04-2017 IPR000644 CBS domain CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 Pfam PF07085 DRTGG domain 135 236 1.9E-20 T 25-04-2017 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 SUPERFAMILY SSF75138 132 243 4.97E-21 T 25-04-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 Gene3D G3DSA:3.40.1390.20 132 246 8.8E-24 T 25-04-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 Pfam PF02833 DHHA2 domain 409 532 4.8E-21 T 25-04-2017 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 Gene3D G3DSA:3.90.1640.10 2 69 2.5E-63 T 25-04-2017 CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 Gene3D G3DSA:3.90.1640.10 298 413 2.5E-63 T 25-04-2017 CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 Gene3D G3DSA:3.10.580.10 247 292 3.2E-15 T 25-04-2017 CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 Gene3D G3DSA:3.10.580.10 81 129 3.2E-15 T 25-04-2017 CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 SUPERFAMILY SSF64182 2 69 2.54E-72 T 25-04-2017 CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 SUPERFAMILY SSF64182 298 533 2.54E-72 T 25-04-2017 CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 Pfam PF01368 DHH family 3 373 9.3E-27 T 25-04-2017 IPR001667 DDH domain CLFO_RS20220 99bf2b3b08d65f24ec7baedf6619efec 537 SMART SM01131 408 533 2.6E-45 T 25-04-2017 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 Pfam PF00672 HAMP domain 285 352 1.0E-10 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 Gene3D G3DSA:3.30.450.20 163 276 4.8E-7 T 25-04-2017 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 586 1.9E-26 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 Gene3D G3DSA:3.30.565.10 419 587 1.5E-46 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 SUPERFAMILY SSF47384 347 432 3.14E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 SMART SM00304 304 356 3.9E-7 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 Pfam PF02743 Cache domain 33 225 5.0E-13 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 SUPERFAMILY SSF158472 309 354 1.44E-5 T 25-04-2017 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 Gene3D G3DSA:3.30.450.20 84 162 1.7E-7 T 25-04-2017 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 Pfam PF00512 His Kinase A (phospho-acceptor) domain 365 430 2.7E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 SUPERFAMILY SSF55874 420 591 5.63E-45 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 SMART SM00387 477 589 4.0E-40 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 2.6E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 528 2.6E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 542 2.6E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 586 2.6E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 Gene3D G3DSA:1.10.287.130 356 418 7.9E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS19455 e7418308f266df10ac313ccca58dce79 617 SMART SM00388 364 431 3.5E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS19925 8cce415a828df3500a050cd80b7ee392 637 Gene3D G3DSA:3.40.50.2030 405 630 6.2E-90 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS19925 8cce415a828df3500a050cd80b7ee392 637 Pfam PF03063 Prismane/CO dehydrogenase family 46 610 5.5E-169 T 25-04-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS19925 8cce415a828df3500a050cd80b7ee392 637 PIRSF PIRSF005023 1 631 2.4E-234 T 25-04-2017 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS19925 8cce415a828df3500a050cd80b7ee392 637 SUPERFAMILY SSF56821 6 634 2.09E-189 T 25-04-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLFO_RS19925 8cce415a828df3500a050cd80b7ee392 637 Gene3D G3DSA:1.20.1270.30 64 235 4.8E-70 T 25-04-2017 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS19925 8cce415a828df3500a050cd80b7ee392 637 Gene3D G3DSA:3.40.50.2030 237 404 1.5E-72 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS19925 8cce415a828df3500a050cd80b7ee392 637 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 8 630 5.4E-208 T 25-04-2017 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS06330 f3ba49fa3c5654a6226253e3b94a7363 128 Pfam PF10990 Protein of unknown function (DUF2809) 28 111 5.9E-28 T 25-04-2017 IPR021257 Protein of unknown function DUF2809 CLFO_RS00900 5b8ae93a9359989a3d558c5f38d32c44 65 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 64 27.99 T 25-04-2017 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS00900 5b8ae93a9359989a3d558c5f38d32c44 65 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 25-04-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS00900 5b8ae93a9359989a3d558c5f38d32c44 65 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.2E-21 T 25-04-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS00900 5b8ae93a9359989a3d558c5f38d32c44 65 PRINTS PR01249 Ribosomal protein L31 signature 30 45 1.2E-21 T 25-04-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS00900 5b8ae93a9359989a3d558c5f38d32c44 65 PRINTS PR01249 Ribosomal protein L31 signature 45 63 1.2E-21 T 25-04-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS00900 5b8ae93a9359989a3d558c5f38d32c44 65 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.1E-32 T 25-04-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS00900 5b8ae93a9359989a3d558c5f38d32c44 65 Pfam PF01197 Ribosomal protein L31 1 64 1.1E-32 T 25-04-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS00900 5b8ae93a9359989a3d558c5f38d32c44 65 SUPERFAMILY SSF143800 1 65 3.92E-27 T 25-04-2017 CLFO_RS10770 89b5c96dd97fbcbf00536a9de06bfc13 513 Gene3D G3DSA:3.30.1370.10 213 289 9.6E-8 T 25-04-2017 IPR004088 K Homology domain, type 1 GO:0003723 CLFO_RS10770 89b5c96dd97fbcbf00536a9de06bfc13 513 Pfam PF00013 KH domain 205 261 6.1E-6 T 25-04-2017 IPR004088 K Homology domain, type 1 GO:0003723 CLFO_RS10770 89b5c96dd97fbcbf00536a9de06bfc13 513 SUPERFAMILY SSF109604 309 460 2.69E-31 T 25-04-2017 CLFO_RS10770 89b5c96dd97fbcbf00536a9de06bfc13 513 Pfam PF12072 Domain of unknown function (DUF3552) 6 198 9.7E-69 T 25-04-2017 IPR022711 Ribonuclease Y, N-terminal CLFO_RS10770 89b5c96dd97fbcbf00536a9de06bfc13 513 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 7 513 2.4E-241 T 25-04-2017 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 CLFO_RS10770 89b5c96dd97fbcbf00536a9de06bfc13 513 TIGRFAM TIGR00277 HDIG: HDIG domain 325 402 1.2E-24 T 25-04-2017 IPR006675 HDIG domain CLFO_RS10770 89b5c96dd97fbcbf00536a9de06bfc13 513 Gene3D G3DSA:1.10.3210.10 309 488 5.3E-45 T 25-04-2017 IPR006674 HD domain CLFO_RS10770 89b5c96dd97fbcbf00536a9de06bfc13 513 SUPERFAMILY SSF54791 201 297 2.2E-17 T 25-04-2017 IPR004088 K Homology domain, type 1 GO:0003723 CLFO_RS10770 89b5c96dd97fbcbf00536a9de06bfc13 513 SMART SM00471 325 431 1.9E-13 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS10770 89b5c96dd97fbcbf00536a9de06bfc13 513 SMART SM00322 201 267 2.8E-6 T 25-04-2017 IPR004087 K Homology domain GO:0003676 CLFO_RS10770 89b5c96dd97fbcbf00536a9de06bfc13 513 Pfam PF01966 HD domain 330 421 3.9E-19 T 25-04-2017 IPR006674 HD domain CLFO_RS10770 89b5c96dd97fbcbf00536a9de06bfc13 513 Hamap MF_00335 Ribonuclease Y [rny]. 5 513 25.724 T 25-04-2017 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 CLFO_RS05295 0022b1eceb2c4d33ddbe4ffaac56e31a 199 SMART SM00855 3 155 3.5E-23 T 25-04-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CLFO_RS05295 0022b1eceb2c4d33ddbe4ffaac56e31a 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 195 7.5E-58 T 25-04-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CLFO_RS05295 0022b1eceb2c4d33ddbe4ffaac56e31a 199 Gene3D G3DSA:3.40.50.1240 1 198 7.5E-60 T 25-04-2017 IPR029033 Histidine phosphatase superfamily CLFO_RS05295 0022b1eceb2c4d33ddbe4ffaac56e31a 199 SUPERFAMILY SSF53254 1 198 4.53E-59 T 25-04-2017 IPR029033 Histidine phosphatase superfamily CLFO_RS05295 0022b1eceb2c4d33ddbe4ffaac56e31a 199 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 25-04-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CLFO_RS02060 b24bfa7199e6ab0aa144b0df58bee269 279 SUPERFAMILY SSF53850 44 279 3.5E-82 T 25-04-2017 CLFO_RS02060 b24bfa7199e6ab0aa144b0df58bee269 279 PIRSF PIRSF002854 1 279 8.2E-103 T 25-04-2017 IPR004872 Lipoprotein NlpA family CLFO_RS02060 b24bfa7199e6ab0aa144b0df58bee269 279 Gene3D G3DSA:3.40.190.10 43 171 2.8E-51 T 25-04-2017 CLFO_RS02060 b24bfa7199e6ab0aa144b0df58bee269 279 Pfam PF03180 NLPA lipoprotein 44 279 2.6E-91 T 25-04-2017 IPR004872 Lipoprotein NlpA family CLFO_RS16885 d01064c1ae6394c23ed3013afb63f464 333 SMART SM00342 247 330 1.5E-23 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS16885 d01064c1ae6394c23ed3013afb63f464 333 Gene3D G3DSA:1.10.10.60 284 332 3.1E-15 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16885 d01064c1ae6394c23ed3013afb63f464 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 3.8E-5 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS16885 d01064c1ae6394c23ed3013afb63f464 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 3.8E-5 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS16885 d01064c1ae6394c23ed3013afb63f464 333 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 284 326 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS16885 d01064c1ae6394c23ed3013afb63f464 333 Pfam PF12833 Helix-turn-helix domain 254 331 4.7E-17 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS16885 d01064c1ae6394c23ed3013afb63f464 333 SUPERFAMILY SSF46689 284 332 2.15E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16885 d01064c1ae6394c23ed3013afb63f464 333 Gene3D G3DSA:1.10.10.60 229 283 7.5E-9 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 138 3.6E-13 T 25-04-2017 CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 Gene3D G3DSA:3.30.565.10 5 203 1.4E-67 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 3 611 24.877 T 25-04-2017 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 Gene3D G3DSA:3.30.230.10 204 327 1.8E-36 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 SMART SM00853 431 571 1.1E-35 T 25-04-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 SUPERFAMILY SSF118116 429 613 2.35E-43 T 25-04-2017 CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 SUPERFAMILY SSF54211 192 328 8.34E-36 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 Pfam PF08676 MutL C terminal dimerisation domain 430 571 6.5E-34 T 25-04-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 95 101 - T 25-04-2017 IPR014762 DNA mismatch repair, conserved site CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 SUPERFAMILY SSF55874 2 213 9.69E-50 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 211 327 1.1E-36 T 25-04-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 307 3.0E-92 T 25-04-2017 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 CLFO_RS10300 df43f8d28bda5020757fa40cc77dec97 615 SMART SM01340 210 328 3.4E-49 T 25-04-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS18015 940d28300913e67290ef6df833946297 191 Gene3D G3DSA:2.20.28.10 147 180 2.8E-11 T 25-04-2017 IPR004039 Rubredoxin-type fold CLFO_RS18015 940d28300913e67290ef6df833946297 191 Gene3D G3DSA:1.20.1260.10 2 142 4.1E-38 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS18015 940d28300913e67290ef6df833946297 191 Pfam PF02915 Rubrerythrin 8 135 5.2E-22 T 25-04-2017 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLFO_RS18015 940d28300913e67290ef6df833946297 191 SUPERFAMILY SSF47240 1 144 1.21E-32 T 25-04-2017 IPR009078 Ferritin-like superfamily CLFO_RS18015 940d28300913e67290ef6df833946297 191 SUPERFAMILY SSF57802 148 180 9.6E-8 T 25-04-2017 CLFO_RS13600 c2520963144a6669647cce5e7d4ce14e 204 SUPERFAMILY SSF53335 8 195 1.56E-37 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS13600 c2520963144a6669647cce5e7d4ce14e 204 Pfam PF08241 Methyltransferase domain 47 140 2.1E-22 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS13600 c2520963144a6669647cce5e7d4ce14e 204 Gene3D G3DSA:3.40.50.150 6 198 3.7E-37 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 427 511 7.4E-33 T 25-04-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 SMART SM00928 426 471 2.0E-21 T 25-04-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 SUPERFAMILY SSF54862 529 581 2.13E-14 T 25-04-2017 CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 Pfam PF10531 SLBB domain 340 388 3.2E-7 T 25-04-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 SUPERFAMILY SSF142984 338 421 4.58E-25 T 25-04-2017 CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 SUPERFAMILY SSF140490 422 523 1.2E-37 T 25-04-2017 CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 Gene3D G3DSA:3.30.70.20 531 581 1.0E-13 T 25-04-2017 CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 534 545 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 Gene3D G3DSA:3.40.30.10 2 93 1.6E-16 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 SUPERFAMILY SSF142019 98 337 7.32E-89 T 25-04-2017 CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 Pfam PF12838 4Fe-4S dicluster domain 534 578 1.8E-8 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 144 316 3.9E-50 T 25-04-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS04240 04fdfb63142d1e095254cb92f4068243 582 SUPERFAMILY SSF52833 3 83 3.8E-13 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS00205 ee5a916e90b05ba220d860d62f88dc03 192 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 3 94 3.0E-24 T 25-04-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLFO_RS00205 ee5a916e90b05ba220d860d62f88dc03 192 Gene3D G3DSA:2.170.120.20 97 183 4.3E-19 T 25-04-2017 IPR020057 Ribosomal protein L25, beta domain CLFO_RS00205 ee5a916e90b05ba220d860d62f88dc03 192 SUPERFAMILY SSF50715 9 179 5.23E-46 T 25-04-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLFO_RS00205 ee5a916e90b05ba220d860d62f88dc03 192 Pfam PF01386 Ribosomal L25p family 8 91 6.9E-22 T 25-04-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLFO_RS00205 ee5a916e90b05ba220d860d62f88dc03 192 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 179 8.2E-41 T 25-04-2017 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLFO_RS00205 ee5a916e90b05ba220d860d62f88dc03 192 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 182 24.744 T 25-04-2017 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLFO_RS00205 ee5a916e90b05ba220d860d62f88dc03 192 Gene3D G3DSA:2.40.240.10 5 94 1.3E-25 T 25-04-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLFO_RS00205 ee5a916e90b05ba220d860d62f88dc03 192 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 180 1.6E-17 T 25-04-2017 IPR020057 Ribosomal protein L25, beta domain CLFO_RS12210 1a5a09f48e69544f302ef3e583fd8682 355 Gene3D G3DSA:2.40.50.140 289 349 6.4E-5 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS12210 1a5a09f48e69544f302ef3e583fd8682 355 Pfam PF08402 TOBE domain 286 350 7.5E-7 T 25-04-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CLFO_RS12210 1a5a09f48e69544f302ef3e583fd8682 355 SMART SM00382 27 210 1.4E-16 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12210 1a5a09f48e69544f302ef3e583fd8682 355 Gene3D G3DSA:3.40.50.300 3 233 1.8E-80 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12210 1a5a09f48e69544f302ef3e583fd8682 355 SUPERFAMILY SSF50331 236 350 5.35E-11 T 25-04-2017 IPR008995 Molybdate/tungstate binding, C-terminal CLFO_RS12210 1a5a09f48e69544f302ef3e583fd8682 355 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS12210 1a5a09f48e69544f302ef3e583fd8682 355 SUPERFAMILY SSF52540 3 242 7.01E-85 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12210 1a5a09f48e69544f302ef3e583fd8682 355 Pfam PF00005 ABC transporter 18 160 2.1E-35 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS16585 386161611c7c5a01435a24dd31c64b14 380 Gene3D G3DSA:1.20.1090.10 173 380 6.5E-66 T 25-04-2017 CLFO_RS16585 386161611c7c5a01435a24dd31c64b14 380 Gene3D G3DSA:3.40.50.1970 5 172 1.3E-45 T 25-04-2017 CLFO_RS16585 386161611c7c5a01435a24dd31c64b14 380 SUPERFAMILY SSF56796 7 380 4.45E-105 T 25-04-2017 CLFO_RS16585 386161611c7c5a01435a24dd31c64b14 380 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 372 3.1E-105 T 25-04-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLFO_RS16585 386161611c7c5a01435a24dd31c64b14 380 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 161 189 - T 25-04-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLFO_RS05695 0182b8c5a216b180c8953df8139e1fd4 221 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 123 2.0E-10 T 25-04-2017 CLFO_RS05695 0182b8c5a216b180c8953df8139e1fd4 221 PIRSF PIRSF016262 1 216 4.7E-60 T 25-04-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CLFO_RS05695 0182b8c5a216b180c8953df8139e1fd4 221 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 32 203 4.6E-51 T 25-04-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CLFO_RS05695 0182b8c5a216b180c8953df8139e1fd4 221 SUPERFAMILY SSF55681 2 206 1.66E-60 T 25-04-2017 CLFO_RS05695 0182b8c5a216b180c8953df8139e1fd4 221 Gene3D G3DSA:3.90.1550.10 2 203 2.3E-68 T 25-04-2017 CLFO_RS05695 0182b8c5a216b180c8953df8139e1fd4 221 Hamap MF_00013 Octanoyltransferase [lipB]. 1 206 32.963 T 25-04-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CLFO_RS05695 0182b8c5a216b180c8953df8139e1fd4 221 Pfam PF03099 Biotin/lipoate A/B protein ligase family 57 159 1.5E-7 T 25-04-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CLFO_RS05695 0182b8c5a216b180c8953df8139e1fd4 221 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 25-04-2017 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 PRINTS PR00059 Ribosomal protein L6 signature 142 163 3.5E-34 T 25-04-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 PRINTS PR00059 Ribosomal protein L6 signature 72 97 3.5E-34 T 25-04-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 3.5E-34 T 25-04-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 PIRSF PIRSF002162 1 178 1.6E-51 T 25-04-2017 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 Gene3D G3DSA:3.90.930.12 84 178 4.8E-41 T 25-04-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 Gene3D G3DSA:3.90.930.12 2 83 1.6E-26 T 25-04-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 25-04-2017 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 37.464 T 25-04-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 Pfam PF00347 Ribosomal protein L6 15 83 9.7E-18 T 25-04-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 Pfam PF00347 Ribosomal protein L6 91 165 9.9E-19 T 25-04-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 1.9E-73 T 25-04-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 SUPERFAMILY SSF56053 84 178 2.62E-37 T 25-04-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19630 89a018e5576403cfecd66422d1dc7587 179 SUPERFAMILY SSF56053 1 83 4.68E-22 T 25-04-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 PIRSF PIRSF001604 1 660 8.0E-230 T 25-04-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 10 654 4.7E-215 T 25-04-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Gene3D G3DSA:3.40.50.10190 577 660 1.1E-22 T 25-04-2017 IPR001357 BRCT domain CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 312 386 1.5E-26 T 25-04-2017 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Pfam PF14520 Helix-hairpin-helix domain 432 487 9.2E-7 T 25-04-2017 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 SUPERFAMILY SSF47781 393 570 5.93E-58 T 25-04-2017 IPR010994 RuvA domain 2-like CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Gene3D G3DSA:1.10.287.610 5 65 1.5E-21 T 25-04-2017 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Gene3D G3DSA:1.10.150.20 421 489 1.7E-25 T 25-04-2017 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 SUPERFAMILY SSF56091 2 306 1.31E-103 T 25-04-2017 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 SUPERFAMILY SSF52113 577 659 1.05E-16 T 25-04-2017 IPR001357 BRCT domain CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 309 3.1E-100 T 25-04-2017 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 SMART SM00292 578 660 2.7E-7 T 25-04-2017 IPR001357 BRCT domain CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 580 658 2.5E-12 T 25-04-2017 IPR001357 BRCT domain CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Hamap MF_01588 DNA ligase [ligA]. 1 659 45.613 T 25-04-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 SMART SM00278 466 485 0.2 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 SMART SM00278 530 549 78.0 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 SMART SM00278 498 517 54.0 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 SMART SM00278 432 451 0.27 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Gene3D G3DSA:2.40.50.140 311 380 6.8E-27 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Gene3D G3DSA:3.30.470.30 118 243 8.2E-38 T 25-04-2017 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Pfam PF12826 Helix-hairpin-helix motif 497 557 8.7E-21 T 25-04-2017 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Gene3D G3DSA:1.10.150.20 493 571 1.1E-25 T 25-04-2017 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 SUPERFAMILY SSF50249 309 384 1.64E-21 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS02325 3388238be21b414cb93661c160397c94 660 SMART SM00532 2 434 2.5E-185 T 25-04-2017 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CLFO_RS02325 3388238be21b414cb93661c160397c94 660 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 395 419 2.4E-6 T 25-04-2017 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CLFO_RS01755 87dcaedd1b15b8b79cf47f2f3bb3722d 512 PIRSF PIRSF000538 1 508 1.3E-152 T 25-04-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLFO_RS01755 87dcaedd1b15b8b79cf47f2f3bb3722d 512 Gene3D G3DSA:3.30.420.40 251 501 3.0E-57 T 25-04-2017 CLFO_RS01755 87dcaedd1b15b8b79cf47f2f3bb3722d 512 SUPERFAMILY SSF53067 3 252 1.3E-60 T 25-04-2017 CLFO_RS01755 87dcaedd1b15b8b79cf47f2f3bb3722d 512 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 455 5.0E-38 T 25-04-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CLFO_RS01755 87dcaedd1b15b8b79cf47f2f3bb3722d 512 Gene3D G3DSA:3.30.420.40 1 250 5.6E-61 T 25-04-2017 CLFO_RS01755 87dcaedd1b15b8b79cf47f2f3bb3722d 512 SUPERFAMILY SSF53067 251 501 1.77E-58 T 25-04-2017 CLFO_RS01755 87dcaedd1b15b8b79cf47f2f3bb3722d 512 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 1.0E-56 T 25-04-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CLFO_RS00735 ceff5c0fc51251c80cad8a46077e8aac 306 SMART SM00046 3 133 2.6E-13 T 25-04-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CLFO_RS00735 ceff5c0fc51251c80cad8a46077e8aac 306 SUPERFAMILY SSF111331 1 298 6.98E-70 T 25-04-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain CLFO_RS00735 ceff5c0fc51251c80cad8a46077e8aac 306 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 297 1.7E-70 T 25-04-2017 IPR005218 Diacylglycerol/lipid kinase CLFO_RS00735 ceff5c0fc51251c80cad8a46077e8aac 306 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 129 9.7E-30 T 25-04-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CLFO_RS03065 f68de1cf323501b9b670cf7f138bf65a 412 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 401 1.4E-153 T 25-04-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CLFO_RS03065 f68de1cf323501b9b670cf7f138bf65a 412 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 318 339 - T 25-04-2017 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CLFO_RS03065 f68de1cf323501b9b670cf7f138bf65a 412 Pfam PF00171 Aldehyde dehydrogenase family 304 401 4.2E-8 T 25-04-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CLFO_RS03065 f68de1cf323501b9b670cf7f138bf65a 412 Pfam PF00171 Aldehyde dehydrogenase family 17 278 1.1E-13 T 25-04-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CLFO_RS03065 f68de1cf323501b9b670cf7f138bf65a 412 Gene3D G3DSA:3.40.309.10 224 369 1.3E-43 T 25-04-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLFO_RS03065 f68de1cf323501b9b670cf7f138bf65a 412 SUPERFAMILY SSF53720 7 411 1.1E-110 T 25-04-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CLFO_RS03065 f68de1cf323501b9b670cf7f138bf65a 412 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 411 39.525 T 25-04-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CLFO_RS03065 f68de1cf323501b9b670cf7f138bf65a 412 PIRSF PIRSF000151 1 412 1.9E-173 T 25-04-2017 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CLFO_RS03065 f68de1cf323501b9b670cf7f138bf65a 412 Gene3D G3DSA:3.40.605.10 5 221 1.3E-90 T 25-04-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CLFO_RS03065 f68de1cf323501b9b670cf7f138bf65a 412 Gene3D G3DSA:3.40.605.10 370 411 1.3E-90 T 25-04-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CLFO_RS19595 789b72417a5a24d25c097a5174817c1c 248 Gene3D G3DSA:3.90.230.10 1 246 4.5E-92 T 25-04-2017 IPR000994 Peptidase M24, structural domain CLFO_RS19595 789b72417a5a24d25c097a5174817c1c 248 Pfam PF00557 Metallopeptidase family M24 12 238 6.3E-55 T 25-04-2017 IPR000994 Peptidase M24, structural domain CLFO_RS19595 789b72417a5a24d25c097a5174817c1c 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 42.532 T 25-04-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CLFO_RS19595 789b72417a5a24d25c097a5174817c1c 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 25-04-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CLFO_RS19595 789b72417a5a24d25c097a5174817c1c 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 246 6.4E-104 T 25-04-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CLFO_RS19595 789b72417a5a24d25c097a5174817c1c 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 3.1E-23 T 25-04-2017 IPR001714 Peptidase M24, methionine aminopeptidase CLFO_RS19595 789b72417a5a24d25c097a5174817c1c 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 3.1E-23 T 25-04-2017 IPR001714 Peptidase M24, methionine aminopeptidase CLFO_RS19595 789b72417a5a24d25c097a5174817c1c 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 3.1E-23 T 25-04-2017 IPR001714 Peptidase M24, methionine aminopeptidase CLFO_RS19595 789b72417a5a24d25c097a5174817c1c 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 3.1E-23 T 25-04-2017 IPR001714 Peptidase M24, methionine aminopeptidase CLFO_RS19595 789b72417a5a24d25c097a5174817c1c 248 SUPERFAMILY SSF55920 1 246 2.36E-89 T 25-04-2017 IPR000994 Peptidase M24, structural domain CLFO_RS10000 0295fed288dad1cee281c0c1e594aa39 263 Gene3D G3DSA:1.10.10.60 146 197 5.2E-12 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS10000 0295fed288dad1cee281c0c1e594aa39 263 SUPERFAMILY SSF46689 146 193 3.0E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS10000 0295fed288dad1cee281c0c1e594aa39 263 Pfam PF12833 Helix-turn-helix domain 168 245 3.2E-15 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS10000 0295fed288dad1cee281c0c1e594aa39 263 SUPERFAMILY SSF46689 197 247 2.08E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS10000 0295fed288dad1cee281c0c1e594aa39 263 SMART SM00342 161 244 2.1E-24 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS10000 0295fed288dad1cee281c0c1e594aa39 263 Gene3D G3DSA:1.10.10.60 198 247 3.0E-15 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS10000 0295fed288dad1cee281c0c1e594aa39 263 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 240 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS05185 1c2a94d791dc12199141761d02cde9bd 142 Gene3D G3DSA:3.10.580.10 1 117 6.6E-34 T 25-04-2017 CLFO_RS05185 1c2a94d791dc12199141761d02cde9bd 142 SMART SM00116 10 58 0.011 T 25-04-2017 IPR000644 CBS domain CLFO_RS05185 1c2a94d791dc12199141761d02cde9bd 142 SMART SM00116 75 122 4.1E-10 T 25-04-2017 IPR000644 CBS domain CLFO_RS05185 1c2a94d791dc12199141761d02cde9bd 142 SUPERFAMILY SSF54631 1 117 1.17E-33 T 25-04-2017 CLFO_RS05185 1c2a94d791dc12199141761d02cde9bd 142 Pfam PF00571 CBS domain 69 118 7.3E-13 T 25-04-2017 IPR000644 CBS domain CLFO_RS05185 1c2a94d791dc12199141761d02cde9bd 142 Pfam PF00571 CBS domain 3 54 5.0E-10 T 25-04-2017 IPR000644 CBS domain CLFO_RS12985 11ab7f8726fea89517f2cbfcd6d9d84c 482 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 448 2.5E-140 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS12985 11ab7f8726fea89517f2cbfcd6d9d84c 482 Pfam PF01235 Sodium:alanine symporter family 51 460 2.2E-155 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS12985 11ab7f8726fea89517f2cbfcd6d9d84c 482 PRINTS PR00175 Sodium/alanine symporter signature 353 375 1.8E-60 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS12985 11ab7f8726fea89517f2cbfcd6d9d84c 482 PRINTS PR00175 Sodium/alanine symporter signature 204 223 1.8E-60 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS12985 11ab7f8726fea89517f2cbfcd6d9d84c 482 PRINTS PR00175 Sodium/alanine symporter signature 176 194 1.8E-60 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS12985 11ab7f8726fea89517f2cbfcd6d9d84c 482 PRINTS PR00175 Sodium/alanine symporter signature 295 313 1.8E-60 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS12985 11ab7f8726fea89517f2cbfcd6d9d84c 482 PRINTS PR00175 Sodium/alanine symporter signature 417 437 1.8E-60 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS12985 11ab7f8726fea89517f2cbfcd6d9d84c 482 PRINTS PR00175 Sodium/alanine symporter signature 86 108 1.8E-60 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS04185 4ee6da77b940bfb63fbfbfc44ce24882 53 SUPERFAMILY SSF140500 6 50 2.09E-6 T 25-04-2017 CLFO_RS04185 4ee6da77b940bfb63fbfbfc44ce24882 53 Pfam PF09388 Spo0E like sporulation regulatory protein 6 44 4.4E-7 T 25-04-2017 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 CLFO_RS14780 79daed097c60f216f9b9e61c4ce32649 293 Pfam PF01584 CheW-like domain 16 151 1.1E-30 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS14780 79daed097c60f216f9b9e61c4ce32649 293 Gene3D G3DSA:2.30.30.40 83 141 2.8E-10 T 25-04-2017 CLFO_RS14780 79daed097c60f216f9b9e61c4ce32649 293 SMART SM00448 170 285 9.3E-19 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS14780 79daed097c60f216f9b9e61c4ce32649 293 SUPERFAMILY SSF50341 5 154 8.5E-30 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS14780 79daed097c60f216f9b9e61c4ce32649 293 PIRSF PIRSF002867 1 293 6.7E-83 T 25-04-2017 IPR024181 Chemotaxis response regulator CheV CLFO_RS14780 79daed097c60f216f9b9e61c4ce32649 293 SUPERFAMILY SSF52172 169 290 4.7E-23 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS14780 79daed097c60f216f9b9e61c4ce32649 293 SMART SM00260 11 149 1.5E-27 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS14780 79daed097c60f216f9b9e61c4ce32649 293 Gene3D G3DSA:2.40.50.180 53 82 3.1E-4 T 25-04-2017 CLFO_RS14780 79daed097c60f216f9b9e61c4ce32649 293 Pfam PF00072 Response regulator receiver domain 173 285 4.4E-21 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS14780 79daed097c60f216f9b9e61c4ce32649 293 Gene3D G3DSA:3.40.50.2300 168 290 1.6E-27 T 25-04-2017 CLFO_RS14370 dc4226d9bf83d56361fc7e001833676b 156 PIRSF PIRSF029256 2 156 5.9E-62 T 25-04-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CLFO_RS14370 dc4226d9bf83d56361fc7e001833676b 156 Pfam PF00588 SpoU rRNA Methylase family 3 144 9.8E-34 T 25-04-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CLFO_RS14370 dc4226d9bf83d56361fc7e001833676b 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 3 154 2.6E-57 T 25-04-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CLFO_RS14370 dc4226d9bf83d56361fc7e001833676b 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 153 33.902 T 25-04-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CLFO_RS14370 dc4226d9bf83d56361fc7e001833676b 156 SUPERFAMILY SSF75217 3 155 5.69E-41 T 25-04-2017 IPR029028 Alpha/beta knot methyltransferases CLFO_RS14370 dc4226d9bf83d56361fc7e001833676b 156 Gene3D G3DSA:3.40.1280.10 2 155 4.0E-62 T 25-04-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2003 2201 6.2E-33 T 25-04-2017 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SMART SM01294 2291 2357 4.3E-7 T 25-04-2017 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Gene3D G3DSA:3.40.109.10 17 155 6.4E-10 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SUPERFAMILY SSF53901 419 785 7.77E-75 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1544 1662 1.5E-10 T 25-04-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Gene3D G3DSA:3.40.109.10 202 376 8.5E-8 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1171 1415 2.1E-86 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2411 2643 7.7E-66 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 421 668 1.3E-70 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SUPERFAMILY SSF51735 2003 2214 8.7E-28 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2316 2331 - T 25-04-2017 IPR006162 Phosphopantetheine attachment site CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SUPERFAMILY SSF53901 2407 2759 5.46E-64 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Gene3D G3DSA:3.40.47.10 681 856 2.6E-41 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Gene3D G3DSA:3.40.47.10 1428 1601 6.1E-52 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Gene3D G3DSA:3.40.47.10 2658 2818 5.0E-37 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1423 1540 4.3E-40 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2651 2765 1.7E-28 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 677 793 5.1E-30 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SUPERFAMILY SSF47336 2292 2362 3.66E-14 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SUPERFAMILY SSF47336 2395 2425 3.66E-14 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SMART SM00823 Phosphopantetheine attachment site 2290 2361 5.0E-4 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SMART SM00823 Phosphopantetheine attachment site 1051 1121 0.016 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SUPERFAMILY SSF53901 1578 1597 1.67E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SUPERFAMILY SSF53901 1167 1533 1.67E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Gene3D G3DSA:3.40.47.10 1178 1427 6.7E-89 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Gene3D G3DSA:3.40.47.10 422 680 8.0E-78 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SUPERFAMILY SSF55469 17 148 2.62E-11 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Pfam PF08659 KR domain 2006 2200 3.9E-39 T 25-04-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Gene3D G3DSA:1.10.1200.10 2292 2365 9.3E-11 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Gene3D G3DSA:1.10.1200.10 1049 1177 1.2E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Pfam PF00881 Nitroreductase family 200 376 2.9E-8 T 25-04-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Pfam PF00881 Nitroreductase family 17 100 1.4E-5 T 25-04-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SMART SM00825 Beta-ketoacyl synthase 422 855 3.3E-123 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SMART SM00825 Beta-ketoacyl synthase 1172 1602 4.0E-198 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SMART SM00825 Beta-ketoacyl synthase 2413 2817 2.5E-105 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Gene3D G3DSA:3.40.47.10 2407 2655 1.3E-69 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2556 2572 - T 25-04-2017 IPR018201 Beta-ketoacyl synthase, active site CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SUPERFAMILY SSF55469 200 263 9.28E-10 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SUPERFAMILY SSF55469 291 383 9.28E-10 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Pfam PF00550 Phosphopantetheine attachment site 2292 2357 5.7E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Pfam PF00550 Phosphopantetheine attachment site 1053 1116 4.6E-8 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 SUPERFAMILY SSF47336 1049 1127 1.07E-10 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04790 d34455ccfbaf81d798c5efa85c555b57 2892 Gene3D G3DSA:3.40.50.720 2004 2226 3.3E-35 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS18325 addcefbf35c36675cb11527376b01694 399 Pfam PF00999 Sodium/hydrogen exchanger family 9 380 1.9E-31 T 25-04-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CLFO_RS20670 02be6cb678851d98259a9e700b97e02e 243 Gene3D G3DSA:3.40.50.300 6 201 1.5E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20670 02be6cb678851d98259a9e700b97e02e 243 Pfam PF00005 ABC transporter 23 153 1.0E-25 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS20670 02be6cb678851d98259a9e700b97e02e 243 SUPERFAMILY SSF52540 6 218 1.82E-52 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20670 02be6cb678851d98259a9e700b97e02e 243 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS20670 02be6cb678851d98259a9e700b97e02e 243 SMART SM00382 30 204 2.9E-7 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS10095 f14c653dcdf3b461b4be9b56fa7b5771 297 Gene3D G3DSA:3.40.50.300 3 225 5.3E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10095 f14c653dcdf3b461b4be9b56fa7b5771 297 SMART SM00382 28 205 1.0E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS10095 f14c653dcdf3b461b4be9b56fa7b5771 297 SUPERFAMILY SSF52540 3 218 3.34E-56 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10095 f14c653dcdf3b461b4be9b56fa7b5771 297 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS10095 f14c653dcdf3b461b4be9b56fa7b5771 297 Pfam PF00005 ABC transporter 19 158 1.5E-26 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 208 219 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 19 79 5.7E-14 T 25-04-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 103 299 1.4E-23 T 25-04-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 Gene3D G3DSA:3.30.413.10 105 169 3.3E-35 T 25-04-2017 CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 Gene3D G3DSA:3.30.413.10 230 301 3.3E-35 T 25-04-2017 CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 SUPERFAMILY SSF54862 169 232 2.48E-16 T 25-04-2017 CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 SUPERFAMILY SSF56014 229 305 3.36E-33 T 25-04-2017 CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 SUPERFAMILY SSF56014 105 169 3.36E-33 T 25-04-2017 CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 TIGRFAM TIGR02912 sulfite_red_C: sulfite reductase, subunit C 3 318 3.0E-148 T 25-04-2017 IPR014261 Sulphite reductase, subunit C CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 Pfam PF12838 4Fe-4S dicluster domain 175 222 5.3E-7 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 PRINTS PR00397 Sirohaem Fe-binding site signature 147 165 5.8E-7 T 25-04-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 PRINTS PR00397 Sirohaem Fe-binding site signature 106 124 5.8E-7 T 25-04-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 Gene3D G3DSA:3.30.70.20 170 224 8.4E-13 T 25-04-2017 CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 SUPERFAMILY SSF55124 16 80 1.96E-15 T 25-04-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS20240 7cf3c610677fd482b27a404b63645af0 331 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 147 163 - T 25-04-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CLFO_RS15905 0b848b2c372dfaef1f43070386eba5e1 324 SMART SM00382 37 252 2.4E-13 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15905 0b848b2c372dfaef1f43070386eba5e1 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 322 3.9E-24 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS15905 0b848b2c372dfaef1f43070386eba5e1 324 SUPERFAMILY SSF52540 9 257 2.24E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15905 0b848b2c372dfaef1f43070386eba5e1 324 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15905 0b848b2c372dfaef1f43070386eba5e1 324 Pfam PF00005 ABC transporter 28 186 7.9E-26 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15905 0b848b2c372dfaef1f43070386eba5e1 324 Gene3D G3DSA:3.40.50.300 7 259 5.5E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15905 0b848b2c372dfaef1f43070386eba5e1 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 302 3.6E-15 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS09250 1af23b92a7308acb6a6a84f4e922f698 144 TIGRFAM TIGR03419 NifU_clost: FeS cluster assembly scaffold protein NifU 1 115 7.9E-63 T 25-04-2017 IPR017787 NIF system FeS cluster assembly, NifU-like CLFO_RS09250 1af23b92a7308acb6a6a84f4e922f698 144 SUPERFAMILY SSF82649 1 117 2.88E-46 T 25-04-2017 CLFO_RS09250 1af23b92a7308acb6a6a84f4e922f698 144 Pfam PF01592 NifU-like N terminal domain 1 115 4.2E-49 T 25-04-2017 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CLFO_RS09250 1af23b92a7308acb6a6a84f4e922f698 144 Gene3D G3DSA:3.90.1010.10 1 116 5.0E-48 T 25-04-2017 CLFO_RS05395 b075d1397116c2fd0cf0e82d215b9569 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 292 35.73 T 25-04-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CLFO_RS05395 b075d1397116c2fd0cf0e82d215b9569 292 SUPERFAMILY SSF118352 233 291 1.7E-18 T 25-04-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CLFO_RS05395 b075d1397116c2fd0cf0e82d215b9569 292 Pfam PF01430 Hsp33 protein 5 280 2.6E-80 T 25-04-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CLFO_RS05395 b075d1397116c2fd0cf0e82d215b9569 292 PIRSF PIRSF005261 1 292 1.4E-75 T 25-04-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CLFO_RS05395 b075d1397116c2fd0cf0e82d215b9569 292 SUPERFAMILY SSF64397 3 242 4.32E-66 T 25-04-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CLFO_RS05395 b075d1397116c2fd0cf0e82d215b9569 292 Gene3D G3DSA:3.90.1280.10 235 291 1.1E-21 T 25-04-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CLFO_RS05395 b075d1397116c2fd0cf0e82d215b9569 292 Gene3D G3DSA:3.55.30.10 4 234 2.2E-72 T 25-04-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CLFO_RS18435 5cef2ce12d4d5ec04558562e78e7373c 87 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 8 82 1.0E-29 T 25-04-2017 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CLFO_RS18435 5cef2ce12d4d5ec04558562e78e7373c 87 PIRSF PIRSF002736 1 87 2.0E-35 T 25-04-2017 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CLFO_RS18435 5cef2ce12d4d5ec04558562e78e7373c 87 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 86 4.1E-31 T 25-04-2017 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CLFO_RS18435 5cef2ce12d4d5ec04558562e78e7373c 87 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 3.9E-32 T 25-04-2017 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CLFO_RS05020 0ce64c25b9ab29bf6db11cedd2daf796 331 Gene3D G3DSA:3.30.360.10 142 311 5.6E-75 T 25-04-2017 CLFO_RS05020 0ce64c25b9ab29bf6db11cedd2daf796 331 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 328 35.867 T 25-04-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS05020 0ce64c25b9ab29bf6db11cedd2daf796 331 PIRSF PIRSF000148 2 331 1.1E-122 T 25-04-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS05020 0ce64c25b9ab29bf6db11cedd2daf796 331 SUPERFAMILY SSF55347 128 315 3.13E-73 T 25-04-2017 CLFO_RS05020 0ce64c25b9ab29bf6db11cedd2daf796 331 SUPERFAMILY SSF51735 3 156 1.97E-48 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS05020 0ce64c25b9ab29bf6db11cedd2daf796 331 Gene3D G3DSA:3.40.50.720 2 141 1.4E-60 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS05020 0ce64c25b9ab29bf6db11cedd2daf796 331 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 138 314 6.5E-54 T 25-04-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLFO_RS05020 0ce64c25b9ab29bf6db11cedd2daf796 331 SMART SM00859 4 120 1.2E-40 T 25-04-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CLFO_RS05020 0ce64c25b9ab29bf6db11cedd2daf796 331 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 327 1.3E-129 T 25-04-2017 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS05020 0ce64c25b9ab29bf6db11cedd2daf796 331 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 118 1.9E-29 T 25-04-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CLFO_RS04650 6cd27cf61c895a4a494e255d6a273e1d 577 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS04650 6cd27cf61c895a4a494e255d6a273e1d 577 SUPERFAMILY SSF52540 326 569 1.13E-92 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04650 6cd27cf61c895a4a494e255d6a273e1d 577 Pfam PF00005 ABC transporter 349 498 1.1E-36 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS04650 6cd27cf61c895a4a494e255d6a273e1d 577 Gene3D G3DSA:1.20.1560.10 3 316 8.9E-75 T 25-04-2017 CLFO_RS04650 6cd27cf61c895a4a494e255d6a273e1d 577 Pfam PF00664 ABC transporter transmembrane region 17 287 2.1E-53 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS04650 6cd27cf61c895a4a494e255d6a273e1d 577 SUPERFAMILY SSF90123 3 319 6.41E-79 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS04650 6cd27cf61c895a4a494e255d6a273e1d 577 SMART SM00382 358 550 3.4E-16 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04650 6cd27cf61c895a4a494e255d6a273e1d 577 Gene3D G3DSA:3.40.50.300 332 562 2.2E-83 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11430 1c7e311b2251e0e7342c9a81a6061c3d 200 Hamap MF_00328 Guanylate kinase [gmk]. 3 186 36.462 T 25-04-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CLFO_RS11430 1c7e311b2251e0e7342c9a81a6061c3d 200 SUPERFAMILY SSF52540 3 189 1.8E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11430 1c7e311b2251e0e7342c9a81a6061c3d 200 SMART SM00072 4 186 6.9E-56 T 25-04-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CLFO_RS11430 1c7e311b2251e0e7342c9a81a6061c3d 200 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 183 4.6E-73 T 25-04-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CLFO_RS11430 1c7e311b2251e0e7342c9a81a6061c3d 200 Gene3D G3DSA:3.30.63.10 46 86 2.1E-26 T 25-04-2017 CLFO_RS11430 1c7e311b2251e0e7342c9a81a6061c3d 200 Gene3D G3DSA:3.40.50.300 87 198 1.6E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11430 1c7e311b2251e0e7342c9a81a6061c3d 200 Gene3D G3DSA:3.40.50.300 2 45 1.3E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11430 1c7e311b2251e0e7342c9a81a6061c3d 200 ProSitePatterns PS00856 Guanylate kinase-like signature. 39 56 - T 25-04-2017 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CLFO_RS11430 1c7e311b2251e0e7342c9a81a6061c3d 200 Pfam PF00625 Guanylate kinase 7 184 3.5E-50 T 25-04-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CLFO_RS18760 12e9449e4e5d15361c615adcb6c56a47 720 Gene3D G3DSA:3.30.420.10 278 436 2.4E-12 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS18760 12e9449e4e5d15361c615adcb6c56a47 720 Pfam PF00665 Integrase core domain 283 422 6.0E-17 T 25-04-2017 IPR001584 Integrase, catalytic core GO:0015074 CLFO_RS18760 12e9449e4e5d15361c615adcb6c56a47 720 SUPERFAMILY SSF53098 281 428 9.56E-7 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS18760 12e9449e4e5d15361c615adcb6c56a47 720 Pfam PF09299 Mu transposase, C-terminal 515 577 9.0E-10 T 25-04-2017 IPR015378 Transposase-like, Mu, C-terminal CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 Gene3D G3DSA:2.40.50.140 3 139 2.8E-43 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 430 205.039 T 25-04-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 TIGRFAM TIGR00767 rho: transcription termination factor Rho 4 427 1.8E-187 T 25-04-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 SUPERFAMILY SSF68912 2 45 3.14E-6 T 25-04-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 SUPERFAMILY SSF50249 67 139 1.41E-23 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 SMART SM00959 5 47 4.2E-6 T 25-04-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 SMART SM00382 181 366 6.3E-8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 170 374 3.4E-21 T 25-04-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 Pfam PF07497 Rho termination factor, RNA-binding domain 68 139 2.5E-31 T 25-04-2017 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 Pfam PF07498 Rho termination factor, N-terminal domain 5 45 9.2E-9 T 25-04-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 Gene3D G3DSA:3.40.50.300 144 429 5.0E-97 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 SUPERFAMILY SSF52540 105 382 6.57E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00895 ad408803ff7b341985a5524504f3ee9e 431 SMART SM00357 68 132 8.5E-16 T 25-04-2017 IPR011129 Cold shock protein GO:0003676 CLFO_RS00905 a65a3bbde3a07129743b8d96eda4c8f4 196 SUPERFAMILY SSF52540 12 147 1.74E-42 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00905 a65a3bbde3a07129743b8d96eda4c8f4 196 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 179 192 - T 25-04-2017 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 CLFO_RS00905 a65a3bbde3a07129743b8d96eda4c8f4 196 SUPERFAMILY SSF57716 147 194 3.49E-15 T 25-04-2017 CLFO_RS00905 a65a3bbde3a07129743b8d96eda4c8f4 196 Hamap MF_00124 Thymidine kinase [tdk]. 11 195 35.473 T 25-04-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 CLFO_RS00905 a65a3bbde3a07129743b8d96eda4c8f4 196 PIRSF PIRSF035805 9 196 3.5E-64 T 25-04-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 CLFO_RS00905 a65a3bbde3a07129743b8d96eda4c8f4 196 Gene3D G3DSA:3.30.60.20 147 192 1.2E-14 T 25-04-2017 CLFO_RS00905 a65a3bbde3a07129743b8d96eda4c8f4 196 Pfam PF00265 Thymidine kinase 12 192 4.2E-57 T 25-04-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 PRINTS PR00046 Major sigma-70 factor signature 210 222 3.0E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 PRINTS PR00046 Major sigma-70 factor signature 242 253 3.0E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 PRINTS PR00046 Major sigma-70 factor signature 227 242 3.0E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 PRINTS PR00046 Major sigma-70 factor signature 90 98 3.0E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 PRINTS PR00046 Major sigma-70 factor signature 66 79 3.0E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 37 256 2.8E-82 T 25-04-2017 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 PIRSF PIRSF000770 11 257 3.0E-34 T 25-04-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 227 253 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 SUPERFAMILY SSF88659 175 257 3.55E-17 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 SUPERFAMILY SSF88659 114 189 8.72E-15 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 Gene3D G3DSA:1.10.10.10 110 165 6.6E-19 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 SUPERFAMILY SSF88946 5 110 4.19E-35 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 256 1.8E-38 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 Pfam PF04539 Sigma-70 region 3 122 174 3.7E-6 T 25-04-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 Pfam PF04542 Sigma-70 region 2 42 111 4.7E-18 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 Gene3D G3DSA:1.10.601.10 15 109 4.2E-33 T 25-04-2017 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 257 3.5E-149 T 25-04-2017 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 Gene3D G3DSA:1.10.10.10 203 255 1.0E-9 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 Pfam PF04545 Sigma-70, region 4 206 255 2.9E-15 T 25-04-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11680 d67ddd6ed0ec23fa942553cd6ae76bdb 257 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 66 79 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12460 7934214f18104479a801fa63c13fb10e 377 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 153 367 6.5E-25 T 25-04-2017 IPR005135 Endonuclease/exonuclease/phosphatase CLFO_RS12460 7934214f18104479a801fa63c13fb10e 377 SUPERFAMILY SSF56219 149 375 2.09E-43 T 25-04-2017 IPR005135 Endonuclease/exonuclease/phosphatase CLFO_RS12460 7934214f18104479a801fa63c13fb10e 377 Gene3D G3DSA:3.60.10.10 142 374 1.0E-18 T 25-04-2017 IPR005135 Endonuclease/exonuclease/phosphatase CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 SUPERFAMILY SSF52518 787 1174 1.01E-134 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 6.0E-37 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 SUPERFAMILY SSF52518 3 258 3.53E-79 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 247 1.1E-80 T 25-04-2017 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 Gene3D G3DSA:3.30.70.20 672 781 5.4E-19 T 25-04-2017 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 SUPERFAMILY SSF53323 415 668 3.14E-91 T 25-04-2017 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 SUPERFAMILY SSF54862 665 831 4.6E-20 T 25-04-2017 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 Gene3D G3DSA:3.40.920.10 416 624 2.5E-91 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 374 2.1E-16 T 25-04-2017 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 Pfam PF13484 4Fe-4S double cluster binding domain 688 757 1.6E-8 T 25-04-2017 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 Pfam PF10371 Domain of unknown function 631 678 1.8E-24 T 25-04-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 PIRSF PIRSF000159 1 1174 0.0 T 25-04-2017 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 SMART SM00890 621 679 7.6E-32 T 25-04-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 Gene3D G3DSA:3.40.50.970 3 258 5.1E-114 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1070 1.2E-9 T 25-04-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 Gene3D G3DSA:4.10.780.10 631 668 1.4E-18 T 25-04-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 Gene3D G3DSA:3.40.50.970 788 1172 1.2E-152 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 Gene3D G3DSA:3.40.50.920 259 413 7.7E-65 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 SUPERFAMILY SSF52922 259 413 1.43E-51 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS05565 3362edd890745ac06c2fd3cbb37c322a 1174 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1171 0.0 T 25-04-2017 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLFO_RS13215 154903a432cf6754d84912926c2056a3 277 SMART SM00518 3 275 1.0E-94 T 25-04-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CLFO_RS13215 154903a432cf6754d84912926c2056a3 277 Gene3D G3DSA:3.20.20.150 1 276 4.4E-99 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS13215 154903a432cf6754d84912926c2056a3 277 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 210 226 - T 25-04-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CLFO_RS13215 154903a432cf6754d84912926c2056a3 277 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 272 7.3E-90 T 25-04-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CLFO_RS13215 154903a432cf6754d84912926c2056a3 277 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 275 39.653 T 25-04-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CLFO_RS13215 154903a432cf6754d84912926c2056a3 277 Pfam PF01261 Xylose isomerase-like TIM barrel 20 234 1.4E-30 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS13215 154903a432cf6754d84912926c2056a3 277 SUPERFAMILY SSF51658 2 275 1.57E-84 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS13215 154903a432cf6754d84912926c2056a3 277 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 172 179 - T 25-04-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CLFO_RS05280 e4a61cd9a3edf9c86cf3265218702357 187 Gene3D G3DSA:3.40.50.300 6 187 1.8E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05280 e4a61cd9a3edf9c86cf3265218702357 187 SUPERFAMILY SSF52540 6 187 9.19E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05280 e4a61cd9a3edf9c86cf3265218702357 187 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 7 185 1.9E-57 T 25-04-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CLFO_RS05280 e4a61cd9a3edf9c86cf3265218702357 187 PIRSF PIRSF006135 5 187 1.3E-53 T 25-04-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CLFO_RS09245 96cf7a0ed3dcbf018b305415066823df 393 Gene3D G3DSA:3.90.1150.10 247 370 3.0E-49 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS09245 96cf7a0ed3dcbf018b305415066823df 393 SUPERFAMILY SSF53383 3 373 9.14E-112 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS09245 96cf7a0ed3dcbf018b305415066823df 393 Gene3D G3DSA:3.40.640.10 15 246 2.6E-94 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS09245 96cf7a0ed3dcbf018b305415066823df 393 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 3 382 1.4E-186 T 25-04-2017 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CLFO_RS09245 96cf7a0ed3dcbf018b305415066823df 393 PIRSF PIRSF005572 1 380 1.1E-137 T 25-04-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CLFO_RS09245 96cf7a0ed3dcbf018b305415066823df 393 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 391 53.676 T 25-04-2017 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CLFO_RS09245 96cf7a0ed3dcbf018b305415066823df 393 Pfam PF00266 Aminotransferase class-V 3 365 3.0E-87 T 25-04-2017 IPR000192 Aminotransferase class V domain CLFO_RS10010 3e8adfa2ed42db4d6408db7d16b83fcf 437 Gene3D G3DSA:1.10.3080.10 25 408 5.0E-47 T 25-04-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CLFO_RS10010 3e8adfa2ed42db4d6408db7d16b83fcf 437 Pfam PF00654 Voltage gated chloride channel 68 400 2.7E-65 T 25-04-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CLFO_RS10010 3e8adfa2ed42db4d6408db7d16b83fcf 437 SUPERFAMILY SSF81340 13 411 2.62E-76 T 25-04-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CLFO_RS00530 bbafd31ef38b45dc4bf0fc94fc466bac 272 Pfam PF09182 Bacterial purine repressor, N-terminal 5 74 1.3E-30 T 25-04-2017 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 CLFO_RS00530 bbafd31ef38b45dc4bf0fc94fc466bac 272 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 4 265 1.0E-112 T 25-04-2017 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 CLFO_RS00530 bbafd31ef38b45dc4bf0fc94fc466bac 272 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 13 74 6.0E-23 T 25-04-2017 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 CLFO_RS00530 bbafd31ef38b45dc4bf0fc94fc466bac 272 Pfam PF00156 Phosphoribosyl transferase domain 116 243 2.7E-15 T 25-04-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLFO_RS00530 bbafd31ef38b45dc4bf0fc94fc466bac 272 SUPERFAMILY SSF46785 3 75 1.39E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS00530 bbafd31ef38b45dc4bf0fc94fc466bac 272 Gene3D G3DSA:1.10.10.10 2 74 2.2E-30 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS00530 bbafd31ef38b45dc4bf0fc94fc466bac 272 Gene3D G3DSA:3.40.50.2020 84 262 5.8E-51 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS00530 bbafd31ef38b45dc4bf0fc94fc466bac 272 SUPERFAMILY SSF53271 86 257 1.61E-36 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS17165 8f03d3f8253e82962a96a782addd8058 710 SMART SM00220 6 283 1.7E-33 T 25-04-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLFO_RS17165 8f03d3f8253e82962a96a782addd8058 710 Gene3D G3DSA:1.10.510.10 127 277 1.4E-32 T 25-04-2017 CLFO_RS17165 8f03d3f8253e82962a96a782addd8058 710 Gene3D G3DSA:3.30.200.20 15 126 8.5E-20 T 25-04-2017 CLFO_RS17165 8f03d3f8253e82962a96a782addd8058 710 SUPERFAMILY SSF109604 296 696 2.77E-77 T 25-04-2017 CLFO_RS17165 8f03d3f8253e82962a96a782addd8058 710 SUPERFAMILY SSF56112 15 286 3.24E-51 T 25-04-2017 IPR011009 Protein kinase-like domain CLFO_RS17165 8f03d3f8253e82962a96a782addd8058 710 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 135 147 - T 25-04-2017 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CLFO_RS17165 8f03d3f8253e82962a96a782addd8058 710 Pfam PF00069 Protein kinase domain 15 268 6.3E-38 T 25-04-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLFO_RS17165 8f03d3f8253e82962a96a782addd8058 710 Gene3D G3DSA:1.10.3210.10 298 560 6.7E-69 T 25-04-2017 IPR006674 HD domain CLFO_RS17165 8f03d3f8253e82962a96a782addd8058 710 SMART SM00471 342 488 5.0E-6 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS17165 8f03d3f8253e82962a96a782addd8058 710 Pfam PF01966 HD domain 346 478 6.8E-10 T 25-04-2017 IPR006674 HD domain CLFO_RS12185 37f28ca85d7bd75aa9518b29831e50ed 206 Gene3D G3DSA:1.10.3720.10 2 204 2.2E-46 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12185 37f28ca85d7bd75aa9518b29831e50ed 206 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 98 1.9E-20 T 25-04-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CLFO_RS12185 37f28ca85d7bd75aa9518b29831e50ed 206 SUPERFAMILY SSF161098 2 189 1.7E-42 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12185 37f28ca85d7bd75aa9518b29831e50ed 206 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 203 3.9E-19 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS13700 247bdff615be3107f36cec27dd4aadd2 273 SUPERFAMILY SSF48371 43 248 8.16E-6 T 25-04-2017 IPR016024 Armadillo-type fold GO:0005488 CLFO_RS13700 247bdff615be3107f36cec27dd4aadd2 273 Gene3D G3DSA:1.25.10.10 226 250 5.4E-4 T 25-04-2017 IPR011989 Armadillo-like helical CLFO_RS13700 247bdff615be3107f36cec27dd4aadd2 273 Gene3D G3DSA:1.25.10.10 90 165 5.4E-4 T 25-04-2017 IPR011989 Armadillo-like helical CLFO_RS11775 123f75e7c64fc46b5bb5e8047e3b5387 246 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 241 3.2E-66 T 25-04-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CLFO_RS11775 123f75e7c64fc46b5bb5e8047e3b5387 246 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 234 2.4E-80 T 25-04-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CLFO_RS11775 123f75e7c64fc46b5bb5e8047e3b5387 246 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 241 17.599 T 25-04-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CLFO_RS11775 123f75e7c64fc46b5bb5e8047e3b5387 246 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 129 141 - T 25-04-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CLFO_RS10295 a10b370137b656ac1022671ed5f55910 313 SUPERFAMILY SSF52540 6 151 2.75E-20 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10295 a10b370137b656ac1022671ed5f55910 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 307 30.907 T 25-04-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CLFO_RS10295 a10b370137b656ac1022671ed5f55910 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 6 288 3.8E-102 T 25-04-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CLFO_RS10295 a10b370137b656ac1022671ed5f55910 313 Gene3D G3DSA:1.10.287.890 200 280 4.5E-31 T 25-04-2017 CLFO_RS10295 a10b370137b656ac1022671ed5f55910 313 SUPERFAMILY SSF52540 4 37 2.66E-6 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10295 a10b370137b656ac1022671ed5f55910 313 SUPERFAMILY SSF52540 138 239 2.66E-6 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10295 a10b370137b656ac1022671ed5f55910 313 Pfam PF01715 IPP transferase 38 283 9.0E-84 T 25-04-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CLFO_RS10295 a10b370137b656ac1022671ed5f55910 313 Gene3D G3DSA:3.40.50.300 2 172 1.2E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12830 0487082f9a03ad1551c471b787e5d420 102 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 38 93 2.5E-17 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS12830 0487082f9a03ad1551c471b787e5d420 102 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 37 93 2.8E-20 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS12830 0487082f9a03ad1551c471b787e5d420 102 Gene3D G3DSA:3.40.50.300 1 67 4.1E-15 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12830 0487082f9a03ad1551c471b787e5d420 102 SUPERFAMILY SSF52540 2 72 3.88E-13 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12660 8f5b4881ee54ad0e676383c80d12cdbb 159 SUPERFAMILY SSF101307 3 152 1.44E-50 T 25-04-2017 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CLFO_RS12660 8f5b4881ee54ad0e676383c80d12cdbb 159 Pfam PF04608 Phosphatidylglycerophosphatase A 8 149 2.9E-23 T 25-04-2017 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CLFO_RS12660 8f5b4881ee54ad0e676383c80d12cdbb 159 Gene3D G3DSA:1.10.3760.10 2 157 3.3E-68 T 25-04-2017 IPR027416 YutG-like domain CLFO_RS12660 8f5b4881ee54ad0e676383c80d12cdbb 159 PIRSF PIRSF019587 1 159 1.6E-69 T 25-04-2017 IPR026038 Putative phosphatidylglycerophosphatase CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 SUPERFAMILY SSF54001 411 535 1.08E-32 T 25-04-2017 CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 Gene3D G3DSA:3.90.1720.10 689 783 1.3E-15 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 Gene3D G3DSA:3.90.1720.10 163 275 9.8E-25 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 Gene3D G3DSA:3.90.1720.10 412 537 3.7E-35 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 SUPERFAMILY SSF54001 163 275 3.09E-21 T 25-04-2017 CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 SUPERFAMILY SSF54001 34 154 1.03E-20 T 25-04-2017 CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 SUPERFAMILY SSF54001 544 665 2.45E-26 T 25-04-2017 CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 Pfam PF00877 NlpC/P60 family 44 149 1.0E-10 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 Pfam PF00877 NlpC/P60 family 555 661 1.6E-15 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 Pfam PF00877 NlpC/P60 family 428 533 5.3E-22 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 Pfam PF00877 NlpC/P60 family 296 397 1.3E-13 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 Pfam PF00877 NlpC/P60 family 169 272 1.9E-15 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 Pfam PF00877 NlpC/P60 family 690 782 4.9E-10 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 SUPERFAMILY SSF54001 282 400 1.18E-20 T 25-04-2017 CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 SUPERFAMILY SSF54001 688 783 4.02E-13 T 25-04-2017 CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 Gene3D G3DSA:3.90.1720.10 36 153 4.7E-22 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 Gene3D G3DSA:3.90.1720.10 286 401 3.5E-24 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS15390 fec3d50b629c3d90298b82d6c49a16f5 784 Gene3D G3DSA:3.90.1720.10 544 668 8.9E-30 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS03745 7c1cddf7acd38a939c4e4b38058a3aad 507 SUPERFAMILY SSF55874 349 495 2.23E-23 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03745 7c1cddf7acd38a939c4e4b38058a3aad 507 Pfam PF06580 Histidine kinase 294 371 4.4E-21 T 25-04-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLFO_RS03745 7c1cddf7acd38a939c4e4b38058a3aad 507 SMART SM00387 383 497 7.8E-13 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03745 7c1cddf7acd38a939c4e4b38058a3aad 507 Pfam PF00672 HAMP domain 192 259 4.7E-8 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS03745 7c1cddf7acd38a939c4e4b38058a3aad 507 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 496 4.3E-15 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03745 7c1cddf7acd38a939c4e4b38058a3aad 507 Gene3D G3DSA:3.30.565.10 342 498 1.7E-27 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03745 7c1cddf7acd38a939c4e4b38058a3aad 507 SUPERFAMILY SSF158472 217 261 3.79E-5 T 25-04-2017 CLFO_RS03745 7c1cddf7acd38a939c4e4b38058a3aad 507 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 494 1.7E-8 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03745 7c1cddf7acd38a939c4e4b38058a3aad 507 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 1.7E-8 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03745 7c1cddf7acd38a939c4e4b38058a3aad 507 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 1.7E-8 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS14920 db4dc4207a5e217d0684e1ad259a0129 298 PIRSF PIRSF001365 1 298 1.7E-72 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14920 db4dc4207a5e217d0684e1ad259a0129 298 Gene3D G3DSA:3.20.20.70 7 298 1.7E-84 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS14920 db4dc4207a5e217d0684e1ad259a0129 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 5.9E-17 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14920 db4dc4207a5e217d0684e1ad259a0129 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 5.9E-17 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14920 db4dc4207a5e217d0684e1ad259a0129 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 5.9E-17 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14920 db4dc4207a5e217d0684e1ad259a0129 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 5.9E-17 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14920 db4dc4207a5e217d0684e1ad259a0129 298 Pfam PF00701 Dihydrodipicolinate synthetase family 4 292 3.7E-70 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14920 db4dc4207a5e217d0684e1ad259a0129 298 SUPERFAMILY SSF51569 7 298 2.2E-79 T 25-04-2017 CLFO_RS14920 db4dc4207a5e217d0684e1ad259a0129 298 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 25-04-2017 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS14920 db4dc4207a5e217d0684e1ad259a0129 298 SMART SM01130 2 296 1.8E-85 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS02650 a67a9aa79f78ad2bc8e3d010c84e8d52 103 Gene3D G3DSA:3.30.460.10 3 100 8.8E-15 T 25-04-2017 CLFO_RS02650 a67a9aa79f78ad2bc8e3d010c84e8d52 103 Pfam PF01909 Nucleotidyltransferase domain 20 54 1.3E-6 T 25-04-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CLFO_RS02650 a67a9aa79f78ad2bc8e3d010c84e8d52 103 SUPERFAMILY SSF81301 11 92 9.81E-12 T 25-04-2017 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 Gene3D G3DSA:3.30.70.1110 168 249 5.0E-28 T 25-04-2017 IPR010808 Signal transduction histidine kinase, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 SMART SM01231 299 359 6.3E-18 T 25-04-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 407 546 4.2E-18 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 Gene3D G3DSA:2.40.50.180 571 633 1.3E-15 T 25-04-2017 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 Pfam PF01627 Hpt domain 5 96 4.0E-19 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 SUPERFAMILY SSF47384 300 360 3.26E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 Gene3D G3DSA:3.30.565.10 361 546 1.6E-40 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 Gene3D G3DSA:1.10.287.560 299 360 4.7E-20 T 25-04-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 SUPERFAMILY SSF55052 168 250 9.94E-22 T 25-04-2017 IPR015162 CheY binding CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 544 9.4E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 525 9.4E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 463 9.4E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 501 9.4E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 SMART SM00387 404 547 1.6E-26 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 Pfam PF07194 P2 response regulator binding domain 171 249 1.3E-23 T 25-04-2017 IPR010808 Signal transduction histidine kinase, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 300 359 1.8E-15 T 25-04-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 SUPERFAMILY SSF55874 361 545 6.02E-41 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 Gene3D G3DSA:1.20.120.160 1 134 3.9E-45 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 Pfam PF01584 CheW-like domain 551 676 4.5E-25 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 SMART SM00260 539 678 8.5E-40 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 SMART SM00073 3 100 4.2E-31 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 Gene3D G3DSA:2.30.30.40 547 568 2.5E-25 T 25-04-2017 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 Gene3D G3DSA:2.30.30.40 634 676 2.5E-25 T 25-04-2017 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 SUPERFAMILY SSF50341 546 677 1.83E-33 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS11005 85d69bc43d0bb29b89094ce2794929c3 678 SUPERFAMILY SSF47226 2 127 5.76E-34 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS01120 18a919d6eb497b3af8357984681f83ed 598 Pfam PF02719 Polysaccharide biosynthesis protein 272 554 4.2E-131 T 25-04-2017 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CLFO_RS01120 18a919d6eb497b3af8357984681f83ed 598 Gene3D G3DSA:3.40.50.720 271 450 4.1E-59 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01120 18a919d6eb497b3af8357984681f83ed 598 SUPERFAMILY SSF51735 271 533 5.21E-64 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01120 18a919d6eb497b3af8357984681f83ed 598 SUPERFAMILY SSF53335 94 316 3.32E-16 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS01120 18a919d6eb497b3af8357984681f83ed 598 Pfam PF13727 CoA-binding domain 54 227 3.4E-17 T 25-04-2017 CLFO_RS01120 18a919d6eb497b3af8357984681f83ed 598 Gene3D G3DSA:3.40.50.720 128 237 6.6E-11 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01120 18a919d6eb497b3af8357984681f83ed 598 Gene3D G3DSA:3.90.25.10 451 567 4.2E-8 T 25-04-2017 CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 598 3.6E-279 T 25-04-2017 IPR006298 GTP-binding protein TypA GO:0005525 CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 Pfam PF03144 Elongation factor Tu domain 2 220 290 1.8E-7 T 25-04-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 SUPERFAMILY SSF54980 303 387 1.15E-12 T 25-04-2017 IPR009022 Elongation factor G, III-V domain CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 Pfam PF00009 Elongation factor Tu GTP binding domain 5 196 5.6E-56 T 25-04-2017 CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 SMART SM00838 395 483 4.7E-4 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 Gene3D G3DSA:2.40.30.10 208 303 1.3E-24 T 25-04-2017 CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 25-04-2017 IPR031157 Tr-type G domain, conserved site CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 Gene3D G3DSA:3.40.50.300 2 207 5.4E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 PRINTS PR00315 GTP-binding elongation factor signature 52 60 4.4E-13 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 PRINTS PR00315 GTP-binding elongation factor signature 8 21 4.4E-13 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 PRINTS PR00315 GTP-binding elongation factor signature 124 133 4.4E-13 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 PRINTS PR00315 GTP-binding elongation factor signature 72 82 4.4E-13 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 SUPERFAMILY SSF54980 398 512 1.25E-27 T 25-04-2017 IPR009022 Elongation factor G, III-V domain CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 Gene3D G3DSA:3.30.70.870 304 399 4.7E-31 T 25-04-2017 CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 Gene3D G3DSA:2.40.50.250 482 576 1.1E-38 T 25-04-2017 CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 SUPERFAMILY SSF50447 153 301 3.28E-29 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 SUPERFAMILY SSF52540 2 206 2.83E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 Gene3D G3DSA:3.30.70.240 400 479 2.7E-29 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 Pfam PF00679 Elongation factor G C-terminus 396 479 1.2E-21 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS04230 f3a7d8bf1544941345d6395f6a09cf5e 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 141 6.1E-23 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS19935 53fe0fa9e3149570234c29f17d557621 784 Pfam PF03477 ATP cone domain 3 90 1.4E-18 T 25-04-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CLFO_RS19935 53fe0fa9e3149570234c29f17d557621 784 Pfam PF02867 Ribonucleotide reductase, barrel domain 310 557 7.7E-11 T 25-04-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CLFO_RS19935 53fe0fa9e3149570234c29f17d557621 784 Gene3D G3DSA:3.90.1390.10 725 784 2.7E-30 T 25-04-2017 CLFO_RS19935 53fe0fa9e3149570234c29f17d557621 784 Gene3D G3DSA:3.90.1390.10 623 664 2.7E-30 T 25-04-2017 CLFO_RS19935 53fe0fa9e3149570234c29f17d557621 784 Gene3D G3DSA:3.20.70.20 685 724 3.0E-92 T 25-04-2017 CLFO_RS19935 53fe0fa9e3149570234c29f17d557621 784 Gene3D G3DSA:3.20.70.20 117 229 3.0E-92 T 25-04-2017 CLFO_RS19935 53fe0fa9e3149570234c29f17d557621 784 Gene3D G3DSA:3.20.70.20 311 622 3.0E-92 T 25-04-2017 CLFO_RS19935 53fe0fa9e3149570234c29f17d557621 784 SUPERFAMILY SSF51998 117 752 5.49E-131 T 25-04-2017 CLFO_RS19935 53fe0fa9e3149570234c29f17d557621 784 TIGRFAM TIGR02505 RTPR: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent 119 784 4.1E-115 T 25-04-2017 IPR013345 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0006260|GO:0008998|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 SUPERFAMILY SSF52172 693 821 5.41E-39 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 Pfam PF00990 Diguanylate cyclase, GGDEF domain 824 981 3.9E-44 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 Gene3D G3DSA:3.40.50.2300 688 821 2.5E-39 T 25-04-2017 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 821 984 7.1E-54 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 SUPERFAMILY SSF55073 828 984 2.82E-44 T 25-04-2017 IPR029787 Nucleotide cyclase CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 Pfam PF00512 His Kinase A (phospho-acceptor) domain 438 503 6.3E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 Gene3D G3DSA:3.30.70.270 825 984 6.2E-49 T 25-04-2017 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 SMART SM00448 697 810 1.3E-38 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 Gene3D G3DSA:3.30.565.10 492 661 2.7E-48 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 552 660 1.9E-30 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 601 1.3E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 640 1.3E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 659 1.3E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 615 1.3E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 SMART SM00267 813 985 4.4E-49 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 SUPERFAMILY SSF55874 494 660 3.67E-46 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 SMART SM00388 437 505 1.0E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 SMART SM00387 551 662 8.1E-41 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 Pfam PF00072 Response regulator receiver domain 699 811 8.9E-28 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 SUPERFAMILY SSF47384 425 505 5.3E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 Gene3D G3DSA:1.10.287.130 429 491 1.0E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15660 ddc5d53ef39b99f046e798ca2eb7e51b 986 Pfam PF07695 7TM diverse intracellular signalling 216 414 1.2E-16 T 25-04-2017 IPR011623 7TM-DISM receptor, extracellular domain, type 1 CLFO_RS07010 d255de8043845ed5148d21bce2a6e20e 414 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 311 403 1.6E-16 T 25-04-2017 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLFO_RS07010 d255de8043845ed5148d21bce2a6e20e 414 SMART SM00729 28 254 2.5E-4 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS07010 d255de8043845ed5148d21bce2a6e20e 414 SUPERFAMILY SSF53146 301 408 1.23E-25 T 25-04-2017 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLFO_RS07010 d255de8043845ed5148d21bce2a6e20e 414 Gene3D G3DSA:3.30.420.130 299 412 2.0E-30 T 25-04-2017 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLFO_RS07010 d255de8043845ed5148d21bce2a6e20e 414 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 34 45 - T 25-04-2017 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS07010 d255de8043845ed5148d21bce2a6e20e 414 Pfam PF04055 Radical SAM superfamily 32 214 5.5E-24 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS07010 d255de8043845ed5148d21bce2a6e20e 414 SUPERFAMILY SSF102114 26 264 2.75E-40 T 25-04-2017 CLFO_RS07010 d255de8043845ed5148d21bce2a6e20e 414 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 8 286 1.6E-118 T 25-04-2017 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 CLFO_RS07010 d255de8043845ed5148d21bce2a6e20e 414 Gene3D G3DSA:3.20.20.70 27 248 6.3E-17 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS08375 57ffc5848c56c859cb187779c73ab474 188 Gene3D G3DSA:1.10.530.10 42 176 1.3E-51 T 25-04-2017 CLFO_RS08375 57ffc5848c56c859cb187779c73ab474 188 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 79 107 - T 25-04-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CLFO_RS08375 57ffc5848c56c859cb187779c73ab474 188 SUPERFAMILY SSF53955 49 178 5.63E-47 T 25-04-2017 IPR023346 Lysozyme-like domain CLFO_RS08375 57ffc5848c56c859cb187779c73ab474 188 Pfam PF01464 Transglycosylase SLT domain 61 168 9.1E-32 T 25-04-2017 IPR008258 Transglycosylase SLT domain 1 CLFO_RS16705 b379270ddbec5bec996194fef64f7251 361 Gene3D G3DSA:3.40.50.720 185 303 4.6E-30 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16705 b379270ddbec5bec996194fef64f7251 361 SMART SM00829 17 356 0.0049 T 25-04-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CLFO_RS16705 b379270ddbec5bec996194fef64f7251 361 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 74 88 - T 25-04-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CLFO_RS16705 b379270ddbec5bec996194fef64f7251 361 SUPERFAMILY SSF50129 4 190 3.77E-49 T 25-04-2017 IPR011032 GroES-like CLFO_RS16705 b379270ddbec5bec996194fef64f7251 361 SUPERFAMILY SSF51735 158 317 1.09E-31 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16705 b379270ddbec5bec996194fef64f7251 361 Gene3D G3DSA:3.90.180.10 3 184 1.5E-51 T 25-04-2017 IPR011032 GroES-like CLFO_RS16705 b379270ddbec5bec996194fef64f7251 361 Pfam PF00107 Zinc-binding dehydrogenase 192 319 1.7E-19 T 25-04-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLFO_RS16705 b379270ddbec5bec996194fef64f7251 361 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 146 3.8E-31 T 25-04-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLFO_RS17500 ccfb8506c390f284dbb3092c6e61fe0e 383 SUPERFAMILY SSF51726 9 379 5.41E-33 T 25-04-2017 CLFO_RS17500 ccfb8506c390f284dbb3092c6e61fe0e 383 Gene3D G3DSA:3.20.20.210 182 379 3.1E-16 T 25-04-2017 CLFO_RS17500 ccfb8506c390f284dbb3092c6e61fe0e 383 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 181 379 6.4E-10 T 25-04-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 1.1E-77 T 25-04-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 10 26 1.1E-77 T 25-04-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 200 225 1.1E-77 T 25-04-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 1.1E-77 T 25-04-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 39 65 1.1E-77 T 25-04-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 251 1.1E-77 T 25-04-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 277 303 1.1E-77 T 25-04-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 Pfam PF14842 FliG N-terminal domain 9 112 6.3E-39 T 25-04-2017 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 3 339 2.7E-141 T 25-04-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 Pfam PF01706 FliG C-terminal domain 223 329 4.1E-44 T 25-04-2017 IPR023087 Flagellar motor switch protein FliG, C-terminal CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 Gene3D G3DSA:1.10.220.30 14 76 1.7E-17 T 25-04-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 SUPERFAMILY SSF48029 119 330 2.35E-72 T 25-04-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 Gene3D G3DSA:1.10.220.30 200 338 2.4E-47 T 25-04-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 Gene3D G3DSA:1.10.220.30 78 196 5.1E-35 T 25-04-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 Pfam PF14841 FliG middle domain 120 194 5.2E-32 T 25-04-2017 IPR032779 Flagellar motor switch protein FliG, middle domain CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 SUPERFAMILY SSF48029 11 105 3.4E-23 T 25-04-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLFO_RS11135 747fbfa96cfb2f7d5f5d8a2327550a62 339 PIRSF PIRSF003161 4 339 2.7E-125 T 25-04-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CLFO_RS02015 dd37b1befedac9860caf842b02728a62 171 Gene3D G3DSA:3.40.50.7700 2 162 1.5E-76 T 25-04-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLFO_RS02015 dd37b1befedac9860caf842b02728a62 171 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 158 5.8E-68 T 25-04-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLFO_RS02015 dd37b1befedac9860caf842b02728a62 171 PIRSF PIRSF001338 1 164 4.1E-75 T 25-04-2017 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CLFO_RS02015 dd37b1befedac9860caf842b02728a62 171 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 157 34.019 T 25-04-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLFO_RS02015 dd37b1befedac9860caf842b02728a62 171 SMART SM01001 4 153 6.0E-101 T 25-04-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLFO_RS02015 dd37b1befedac9860caf842b02728a62 171 Pfam PF00731 AIR carboxylase 6 151 1.9E-69 T 25-04-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLFO_RS02015 dd37b1befedac9860caf842b02728a62 171 SUPERFAMILY SSF52255 5 169 5.1E-69 T 25-04-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLFO_RS18110 82b3f8a656e62b70f700c0be47747a2a 404 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 296 381 3.6E-9 T 25-04-2017 IPR023885 4Fe4S-binding SPASM domain CLFO_RS18110 82b3f8a656e62b70f700c0be47747a2a 404 SMART SM00729 37 239 3.3E-4 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS18110 82b3f8a656e62b70f700c0be47747a2a 404 Gene3D G3DSA:3.20.20.70 35 372 7.3E-74 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS18110 82b3f8a656e62b70f700c0be47747a2a 404 Pfam PF13353 4Fe-4S single cluster domain 44 127 8.0E-10 T 25-04-2017 CLFO_RS18110 82b3f8a656e62b70f700c0be47747a2a 404 SUPERFAMILY SSF102114 36 361 1.22E-69 T 25-04-2017 CLFO_RS18110 82b3f8a656e62b70f700c0be47747a2a 404 TIGRFAM TIGR04054 rSAM_NirJ1: putative heme d1 biosynthesis radical SAM protein NirJ1 2 388 2.9E-217 T 25-04-2017 IPR023930 Putative heme d1 biosynthesis protein, NirJ1 CLFO_RS18110 82b3f8a656e62b70f700c0be47747a2a 404 PIRSF PIRSF037420 22 399 3.7E-139 T 25-04-2017 IPR017200 Coenzyme PQQ synthesis protein E CLFO_RS18110 82b3f8a656e62b70f700c0be47747a2a 404 Pfam PF04055 Radical SAM superfamily 42 198 2.0E-21 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS01140 4592a0c150f9e029865dc21372746387 439 SUPERFAMILY SSF52413 314 437 2.75E-26 T 25-04-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS01140 4592a0c150f9e029865dc21372746387 439 Gene3D G3DSA:3.40.50.720 237 436 7.2E-45 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01140 4592a0c150f9e029865dc21372746387 439 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 207 295 6.8E-24 T 25-04-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS01140 4592a0c150f9e029865dc21372746387 439 PIRSF PIRSF500136 2 439 2.8E-150 T 25-04-2017 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CLFO_RS01140 4592a0c150f9e029865dc21372746387 439 SMART SM00984 322 426 4.8E-28 T 25-04-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS01140 4592a0c150f9e029865dc21372746387 439 PIRSF PIRSF000124 12 439 7.6E-61 T 25-04-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CLFO_RS01140 4592a0c150f9e029865dc21372746387 439 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 13 406 4.2E-118 T 25-04-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CLFO_RS01140 4592a0c150f9e029865dc21372746387 439 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 13 188 2.4E-38 T 25-04-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS01140 4592a0c150f9e029865dc21372746387 439 SUPERFAMILY SSF48179 206 296 1.62E-24 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS01140 4592a0c150f9e029865dc21372746387 439 Gene3D G3DSA:3.40.50.720 7 227 5.8E-59 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01140 4592a0c150f9e029865dc21372746387 439 SUPERFAMILY SSF51735 13 196 2.59E-46 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01140 4592a0c150f9e029865dc21372746387 439 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 323 426 6.2E-22 T 25-04-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS00385 15c4b8644d5ea787f1349d72c28d64d7 331 Gene3D G3DSA:3.40.50.300 5 152 2.6E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00385 15c4b8644d5ea787f1349d72c28d64d7 331 Pfam PF13177 DNA polymerase III, delta subunit 8 164 3.0E-57 T 25-04-2017 CLFO_RS00385 15c4b8644d5ea787f1349d72c28d64d7 331 SUPERFAMILY SSF52540 4 204 7.79E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00385 15c4b8644d5ea787f1349d72c28d64d7 331 Gene3D G3DSA:1.10.8.60 153 206 1.4E-5 T 25-04-2017 CLFO_RS00385 15c4b8644d5ea787f1349d72c28d64d7 331 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 323 1.7E-5 T 25-04-2017 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS00385 15c4b8644d5ea787f1349d72c28d64d7 331 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 14 199 6.4E-59 T 25-04-2017 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS18195 5610199a6eb06e6b2510846adb14029f 371 SUPERFAMILY SSF51161 289 356 2.65E-14 T 25-04-2017 IPR011004 Trimeric LpxA-like CLFO_RS18195 5610199a6eb06e6b2510846adb14029f 371 Gene3D G3DSA:3.90.550.10 303 345 9.8E-33 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS18195 5610199a6eb06e6b2510846adb14029f 371 Gene3D G3DSA:3.90.550.10 17 266 9.8E-33 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS18195 5610199a6eb06e6b2510846adb14029f 371 SUPERFAMILY SSF53448 19 259 2.05E-39 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS18195 5610199a6eb06e6b2510846adb14029f 371 SUPERFAMILY SSF53448 303 319 2.05E-39 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS18195 5610199a6eb06e6b2510846adb14029f 371 TIGRFAM TIGR02092 glgD: glucose-1-phosphate adenylyltransferase, GlgD subunit 3 370 3.8E-110 T 25-04-2017 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 CLFO_RS18195 5610199a6eb06e6b2510846adb14029f 371 Pfam PF00483 Nucleotidyl transferase 20 175 2.7E-11 T 25-04-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLFO_RS03355 d955559386fd4c4dccd8f4b126ba9d30 241 Gene3D G3DSA:3.40.50.2300 2 127 9.8E-26 T 25-04-2017 CLFO_RS03355 d955559386fd4c4dccd8f4b126ba9d30 241 Pfam PF04397 LytTr DNA-binding domain 144 234 1.7E-19 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS03355 d955559386fd4c4dccd8f4b126ba9d30 241 Gene3D G3DSA:2.40.50.40 135 202 7.1E-18 T 25-04-2017 CLFO_RS03355 d955559386fd4c4dccd8f4b126ba9d30 241 Pfam PF00072 Response regulator receiver domain 5 112 8.7E-19 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS03355 d955559386fd4c4dccd8f4b126ba9d30 241 SUPERFAMILY SSF52172 3 133 1.57E-24 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS03355 d955559386fd4c4dccd8f4b126ba9d30 241 SMART SM00448 3 116 6.1E-15 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS03355 d955559386fd4c4dccd8f4b126ba9d30 241 SMART SM00850 142 235 2.4E-18 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS20430 e11eed1a0743138d9d3698a67f492cd6 249 Pfam PF13616 PPIC-type PPIASE domain 113 205 1.3E-27 T 25-04-2017 CLFO_RS20430 e11eed1a0743138d9d3698a67f492cd6 249 SUPERFAMILY SSF109998 5 143 9.42E-19 T 25-04-2017 IPR027304 Trigger factor/SurA domain CLFO_RS20430 e11eed1a0743138d9d3698a67f492cd6 249 Gene3D G3DSA:3.10.50.40 107 229 2.1E-47 T 25-04-2017 CLFO_RS20430 e11eed1a0743138d9d3698a67f492cd6 249 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 143 163 - T 25-04-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 CLFO_RS20430 e11eed1a0743138d9d3698a67f492cd6 249 SUPERFAMILY SSF54534 95 203 1.24E-33 T 25-04-2017 CLFO_RS20340 43697a47ee9c461524bd08f1170d063b 651 Pfam PF01568 Molydopterin dinucleotide binding domain 543 644 3.6E-11 T 25-04-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CLFO_RS20340 43697a47ee9c461524bd08f1170d063b 651 Gene3D G3DSA:3.40.50.740 311 524 5.5E-36 T 25-04-2017 CLFO_RS20340 43697a47ee9c461524bd08f1170d063b 651 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 55 2.7E-12 T 25-04-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS20340 43697a47ee9c461524bd08f1170d063b 651 SUPERFAMILY SSF53706 2 527 1.57E-128 T 25-04-2017 CLFO_RS20340 43697a47ee9c461524bd08f1170d063b 651 Gene3D G3DSA:3.40.228.10 133 310 1.4E-50 T 25-04-2017 CLFO_RS20340 43697a47ee9c461524bd08f1170d063b 651 Pfam PF00384 Molybdopterin oxidoreductase 59 457 4.0E-48 T 25-04-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS20340 43697a47ee9c461524bd08f1170d063b 651 Gene3D G3DSA:2.40.40.20 535 649 7.2E-16 T 25-04-2017 CLFO_RS20340 43697a47ee9c461524bd08f1170d063b 651 Gene3D G3DSA:3.40.50.740 61 109 2.3E-8 T 25-04-2017 CLFO_RS20340 43697a47ee9c461524bd08f1170d063b 651 Gene3D G3DSA:2.20.25.90 2 60 8.8E-13 T 25-04-2017 CLFO_RS20340 43697a47ee9c461524bd08f1170d063b 651 SMART SM00926 1 56 7.4E-13 T 25-04-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS20340 43697a47ee9c461524bd08f1170d063b 651 SUPERFAMILY SSF50692 537 649 1.51E-19 T 25-04-2017 IPR009010 Aspartate decarboxylase-like domain CLFO_RS14375 47eef52b7c2c358d38900c9707795ccb 330 Gene3D G3DSA:3.40.190.10 259 328 3.2E-50 T 25-04-2017 CLFO_RS14375 47eef52b7c2c358d38900c9707795ccb 330 Gene3D G3DSA:3.40.190.10 38 117 3.2E-50 T 25-04-2017 CLFO_RS14375 47eef52b7c2c358d38900c9707795ccb 330 Gene3D G3DSA:3.40.190.10 126 258 1.3E-35 T 25-04-2017 CLFO_RS14375 47eef52b7c2c358d38900c9707795ccb 330 SUPERFAMILY SSF53850 38 329 7.51E-71 T 25-04-2017 CLFO_RS14375 47eef52b7c2c358d38900c9707795ccb 330 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 327 1.1E-93 T 25-04-2017 IPR011852 TRAP transporter solute receptor, TAXI family CLFO_RS14375 47eef52b7c2c358d38900c9707795ccb 330 Pfam PF16868 NMT1-like family 41 327 6.2E-87 T 25-04-2017 IPR011852 TRAP transporter solute receptor, TAXI family CLFO_RS13445 78a8063c172eef8554785584fd3678e4 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 165 1.5E-20 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS13445 78a8063c172eef8554785584fd3678e4 175 Pfam PF04545 Sigma-70, region 4 117 165 1.5E-12 T 25-04-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS13445 78a8063c172eef8554785584fd3678e4 175 Gene3D G3DSA:1.10.1740.10 4 108 1.8E-16 T 25-04-2017 CLFO_RS13445 78a8063c172eef8554785584fd3678e4 175 SUPERFAMILY SSF88946 2 100 2.31E-13 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS13445 78a8063c172eef8554785584fd3678e4 175 SUPERFAMILY SSF88659 101 167 3.92E-16 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS13445 78a8063c172eef8554785584fd3678e4 175 Gene3D G3DSA:1.10.10.10 109 169 1.9E-19 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13445 78a8063c172eef8554785584fd3678e4 175 Pfam PF04542 Sigma-70 region 2 28 87 4.5E-5 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS14030 b4c1e22a1361e1ca1a48a43b33d838ac 288 Pfam PF14526 Integron-associated effector binding protein 135 285 3.2E-21 T 25-04-2017 IPR029441 Integron-associated effector binding protein CLFO_RS14030 b4c1e22a1361e1ca1a48a43b33d838ac 288 Gene3D G3DSA:1.10.10.60 58 108 8.2E-12 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS14030 b4c1e22a1361e1ca1a48a43b33d838ac 288 Pfam PF12833 Helix-turn-helix domain 28 105 2.0E-13 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS14030 b4c1e22a1361e1ca1a48a43b33d838ac 288 SMART SM00342 21 104 3.6E-16 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS14030 b4c1e22a1361e1ca1a48a43b33d838ac 288 SUPERFAMILY SSF55136 133 288 1.34E-25 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS14030 b4c1e22a1361e1ca1a48a43b33d838ac 288 Gene3D G3DSA:1.10.10.60 1 57 9.7E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS14030 b4c1e22a1361e1ca1a48a43b33d838ac 288 SUPERFAMILY SSF46689 58 108 7.17E-8 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS14030 b4c1e22a1361e1ca1a48a43b33d838ac 288 Gene3D G3DSA:3.20.80.10 133 286 4.5E-28 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS14030 b4c1e22a1361e1ca1a48a43b33d838ac 288 SMART SM00871 132 286 4.9E-19 T 25-04-2017 IPR010499 Bacterial transcription activator, effector binding CLFO_RS14030 b4c1e22a1361e1ca1a48a43b33d838ac 288 SUPERFAMILY SSF46689 6 54 5.38E-8 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 SUPERFAMILY SSF51905 6 250 1.3E-60 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 SUPERFAMILY SSF51905 354 406 1.3E-60 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 Gene3D G3DSA:3.90.700.10 238 345 4.0E-25 T 25-04-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 Pfam PF00890 FAD binding domain 13 379 1.8E-25 T 25-04-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 Gene3D G3DSA:1.20.58.100 424 528 3.5E-30 T 25-04-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 SUPERFAMILY SSF46977 429 552 2.75E-29 T 25-04-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 550 2.9E-6 T 25-04-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.4E-6 T 25-04-2017 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 375 1.4E-6 T 25-04-2017 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 PIRSF PIRSF000171 2 564 1.0E-207 T 25-04-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 SUPERFAMILY SSF56425 233 352 5.02E-32 T 25-04-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 Gene3D G3DSA:3.50.50.60 353 399 7.5E-48 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS06525 a7619f86cd0da65a3e2c913f5dce98d1 564 Gene3D G3DSA:3.50.50.60 8 234 7.5E-48 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS02370 d2fafa4e3c5b9efb380fefd73340c86b 696 Gene3D G3DSA:3.40.630.40 511 693 3.2E-61 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS02370 d2fafa4e3c5b9efb380fefd73340c86b 696 SMART SM00646 572 689 2.0E-35 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS02370 d2fafa4e3c5b9efb380fefd73340c86b 696 SUPERFAMILY SSF53187 510 692 2.51E-55 T 25-04-2017 CLFO_RS02370 d2fafa4e3c5b9efb380fefd73340c86b 696 SUPERFAMILY SSF55383 63 151 1.96E-14 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02370 d2fafa4e3c5b9efb380fefd73340c86b 696 Gene3D G3DSA:3.30.457.10 71 140 9.7E-15 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02370 d2fafa4e3c5b9efb380fefd73340c86b 696 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 512 689 2.7E-52 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS02370 d2fafa4e3c5b9efb380fefd73340c86b 696 Pfam PF11741 AMIN domain 295 372 1.3E-10 T 25-04-2017 IPR021731 AMIN domain CLFO_RS02370 d2fafa4e3c5b9efb380fefd73340c86b 696 Pfam PF11741 AMIN domain 171 269 5.1E-14 T 25-04-2017 IPR021731 AMIN domain CLFO_RS02370 d2fafa4e3c5b9efb380fefd73340c86b 696 Pfam PF07833 Copper amine oxidase N-terminal domain 61 156 1.8E-20 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS08265 30ee6ba2123f13bee041d90e6d853e55 215 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 202 1.4E-60 T 25-04-2017 IPR015796 Impact family, bacterial/archaeal CLFO_RS08265 30ee6ba2123f13bee041d90e6d853e55 215 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 25-04-2017 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CLFO_RS08265 30ee6ba2123f13bee041d90e6d853e55 215 Gene3D G3DSA:3.30.70.240 136 206 3.4E-9 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS08265 30ee6ba2123f13bee041d90e6d853e55 215 Pfam PF09186 Domain of unknown function (DUF1949) 140 195 6.5E-16 T 25-04-2017 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CLFO_RS08265 30ee6ba2123f13bee041d90e6d853e55 215 Gene3D G3DSA:3.30.230.30 5 131 1.1E-45 T 25-04-2017 IPR001498 Impact, N-terminal CLFO_RS08265 30ee6ba2123f13bee041d90e6d853e55 215 Pfam PF01205 Uncharacterized protein family UPF0029 20 124 1.7E-30 T 25-04-2017 IPR001498 Impact, N-terminal CLFO_RS08265 30ee6ba2123f13bee041d90e6d853e55 215 SUPERFAMILY SSF54211 2 130 8.34E-42 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS08265 30ee6ba2123f13bee041d90e6d853e55 215 SUPERFAMILY SSF54980 135 202 7.05E-12 T 25-04-2017 IPR009022 Elongation factor G, III-V domain CLFO_RS10290 fe6b32300ce3a3566b005a1319ac69dd 77 SUPERFAMILY SSF50182 6 65 5.93E-25 T 25-04-2017 IPR010920 LSM domain CLFO_RS10290 fe6b32300ce3a3566b005a1319ac69dd 77 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 30.193 T 25-04-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CLFO_RS10290 fe6b32300ce3a3566b005a1319ac69dd 77 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 65 7.3E-32 T 25-04-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CLFO_RS10290 fe6b32300ce3a3566b005a1319ac69dd 77 Gene3D G3DSA:2.30.30.100 1 76 2.6E-34 T 25-04-2017 CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 364 44.05 T 25-04-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 1.7E-39 T 25-04-2017 IPR013029 Domain of unknown function DUF933 CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 PIRSF PIRSF006641 1 364 1.5E-157 T 25-04-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 2 364 1.5E-154 T 25-04-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 SUPERFAMILY SSF52540 1 302 6.75E-85 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 Pfam PF01926 50S ribosome-binding GTPase 3 116 4.8E-22 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 Gene3D G3DSA:3.10.20.30 268 364 1.4E-48 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 Gene3D G3DSA:1.10.150.300 129 197 2.2E-25 T 25-04-2017 IPR023192 TGS-like domain CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 SUPERFAMILY SSF81271 280 361 2.83E-35 T 25-04-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 Gene3D G3DSA:3.40.50.300 198 267 1.5E-45 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 Gene3D G3DSA:3.40.50.300 2 128 1.5E-45 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 85 103 1.6E-34 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 68 83 1.6E-34 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 42 1.6E-34 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS02880 95677944065a06610feda2303ac16f8a 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 3 23 1.6E-34 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS14825 90c0367d78494de182aadcc25f8f9e0f 217 Gene3D G3DSA:1.10.10.60 3 46 5.1E-18 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS14825 90c0367d78494de182aadcc25f8f9e0f 217 SUPERFAMILY SSF46689 3 77 3.94E-18 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS14825 90c0367d78494de182aadcc25f8f9e0f 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 1.0E-12 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS14825 90c0367d78494de182aadcc25f8f9e0f 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 2.5E-6 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS14825 90c0367d78494de182aadcc25f8f9e0f 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 2.5E-6 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS14825 90c0367d78494de182aadcc25f8f9e0f 217 Gene3D G3DSA:1.10.10.60 47 80 3.2E-6 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS14825 90c0367d78494de182aadcc25f8f9e0f 217 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 58 - T 25-04-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLFO_RS19645 9c9b3fd698651a1e8368eb93e73ee1af 179 Gene3D G3DSA:3.30.1440.10 1 177 2.2E-80 T 25-04-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19645 9c9b3fd698651a1e8368eb93e73ee1af 179 Pfam PF00281 Ribosomal protein L5 24 80 9.5E-29 T 25-04-2017 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19645 9c9b3fd698651a1e8368eb93e73ee1af 179 Pfam PF00673 ribosomal L5P family C-terminus 85 177 1.1E-42 T 25-04-2017 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19645 9c9b3fd698651a1e8368eb93e73ee1af 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.154 T 25-04-2017 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19645 9c9b3fd698651a1e8368eb93e73ee1af 179 SUPERFAMILY SSF55282 3 178 7.77E-78 T 25-04-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19645 9c9b3fd698651a1e8368eb93e73ee1af 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 25-04-2017 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19645 9c9b3fd698651a1e8368eb93e73ee1af 179 PIRSF PIRSF002161 1 179 3.5E-68 T 25-04-2017 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS06520 93db06a5ea2a5a474b1ae5d6246b159f 203 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 23 194 38.453 T 25-04-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CLFO_RS06520 93db06a5ea2a5a474b1ae5d6246b159f 203 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 7 190 6.0E-83 T 25-04-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CLFO_RS06520 93db06a5ea2a5a474b1ae5d6246b159f 203 SUPERFAMILY SSF52540 23 190 2.99E-39 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06520 93db06a5ea2a5a474b1ae5d6246b159f 203 Gene3D G3DSA:3.40.50.300 2 198 5.2E-88 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06520 93db06a5ea2a5a474b1ae5d6246b159f 203 Pfam PF01583 Adenylylsulphate kinase 24 177 4.9E-73 T 25-04-2017 CLFO_RS16520 6bd0b53a21314a3656bb49f811d4bf69 87 Gene3D G3DSA:2.40.50.220 1 82 1.3E-27 T 25-04-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLFO_RS16520 6bd0b53a21314a3656bb49f811d4bf69 87 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 81 1.2E-26 T 25-04-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLFO_RS16520 6bd0b53a21314a3656bb49f811d4bf69 87 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 12 81 6.0E-20 T 25-04-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLFO_RS16520 6bd0b53a21314a3656bb49f811d4bf69 87 SUPERFAMILY SSF159133 1 82 1.07E-25 T 25-04-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLFO_RS00570 a8c36e96592a63b17094d33d25763828 183 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.2E-9 T 25-04-2017 IPR007159 SpoVT-AbrB domain GO:0003677 CLFO_RS00570 a8c36e96592a63b17094d33d25763828 183 Gene3D G3DSA:2.10.260.10 2 52 1.5E-27 T 25-04-2017 CLFO_RS00570 a8c36e96592a63b17094d33d25763828 183 PIRSF PIRSF026579 1 183 3.0E-91 T 25-04-2017 IPR014213 Sporulation stage V, protein T CLFO_RS00570 a8c36e96592a63b17094d33d25763828 183 Gene3D G3DSA:3.30.450.40 104 178 6.1E-4 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS00570 a8c36e96592a63b17094d33d25763828 183 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 182 2.6E-50 T 25-04-2017 CLFO_RS00570 a8c36e96592a63b17094d33d25763828 183 SMART SM00966 8 52 2.2E-9 T 25-04-2017 IPR007159 SpoVT-AbrB domain GO:0003677 CLFO_RS00570 a8c36e96592a63b17094d33d25763828 183 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 5.0E-15 T 25-04-2017 IPR007159 SpoVT-AbrB domain GO:0003677 CLFO_RS00570 a8c36e96592a63b17094d33d25763828 183 SUPERFAMILY SSF55781 70 181 5.89E-5 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS00570 a8c36e96592a63b17094d33d25763828 183 SUPERFAMILY SSF89447 2 52 9.94E-14 T 25-04-2017 CLFO_RS00570 a8c36e96592a63b17094d33d25763828 183 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 182 5.1E-89 T 25-04-2017 IPR014213 Sporulation stage V, protein T CLFO_RS11070 fa3e5477cab6dbdd5e2fcf2fd406fc0d 331 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 322 8.2E-20 T 25-04-2017 IPR001543 Surface presentation of antigen (SpoA) CLFO_RS11070 fa3e5477cab6dbdd5e2fcf2fd406fc0d 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 1.4E-24 T 25-04-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLFO_RS11070 fa3e5477cab6dbdd5e2fcf2fd406fc0d 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 1.4E-24 T 25-04-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLFO_RS11070 fa3e5477cab6dbdd5e2fcf2fd406fc0d 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.4E-24 T 25-04-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLFO_RS11070 fa3e5477cab6dbdd5e2fcf2fd406fc0d 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 1.4E-24 T 25-04-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLFO_RS11070 fa3e5477cab6dbdd5e2fcf2fd406fc0d 331 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 321 7.7E-102 T 25-04-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLFO_RS11070 fa3e5477cab6dbdd5e2fcf2fd406fc0d 331 SUPERFAMILY SSF101801 250 328 7.19E-17 T 25-04-2017 IPR001543 Surface presentation of antigen (SpoA) CLFO_RS11070 fa3e5477cab6dbdd5e2fcf2fd406fc0d 331 PIRSF PIRSF002888 1 330 1.1E-107 T 25-04-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLFO_RS11070 fa3e5477cab6dbdd5e2fcf2fd406fc0d 331 SUPERFAMILY SSF103039 45 230 5.49E-25 T 25-04-2017 IPR028976 CheC-like domain CLFO_RS11070 fa3e5477cab6dbdd5e2fcf2fd406fc0d 331 Gene3D G3DSA:2.30.330.10 243 326 2.2E-18 T 25-04-2017 CLFO_RS11070 fa3e5477cab6dbdd5e2fcf2fd406fc0d 331 Pfam PF02154 Flagellar motor switch protein FliM 39 229 1.3E-64 T 25-04-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CLFO_RS11070 fa3e5477cab6dbdd5e2fcf2fd406fc0d 331 Gene3D G3DSA:3.40.1550.10 46 217 2.3E-7 T 25-04-2017 IPR028976 CheC-like domain CLFO_RS01660 0343eba8b1a107a4fea0b4dca4c11c01 126 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 119 2.8E-38 T 25-04-2017 IPR003713 Flagellar protein FliS GO:0044780 CLFO_RS01660 0343eba8b1a107a4fea0b4dca4c11c01 126 PIRSF PIRSF039090 1 125 7.5E-41 T 25-04-2017 IPR003713 Flagellar protein FliS GO:0044780 CLFO_RS01660 0343eba8b1a107a4fea0b4dca4c11c01 126 Gene3D G3DSA:1.20.120.340 3 121 6.0E-44 T 25-04-2017 IPR003713 Flagellar protein FliS GO:0044780 CLFO_RS01660 0343eba8b1a107a4fea0b4dca4c11c01 126 SUPERFAMILY SSF101116 4 122 7.98E-40 T 25-04-2017 IPR003713 Flagellar protein FliS GO:0044780 CLFO_RS01660 0343eba8b1a107a4fea0b4dca4c11c01 126 Pfam PF02561 Flagellar protein FliS 7 119 4.9E-42 T 25-04-2017 IPR003713 Flagellar protein FliS GO:0044780 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 Pfam PF03129 Anticodon binding domain 541 630 1.2E-24 T 25-04-2017 IPR004154 Anticodon-binding CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 Gene3D G3DSA:3.30.980.10 67 131 1.2E-43 T 25-04-2017 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 Gene3D G3DSA:3.30.980.10 189 225 1.2E-43 T 25-04-2017 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 Gene3D G3DSA:3.30.930.10 243 530 1.5E-124 T 25-04-2017 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 74 631 6.8E-235 T 25-04-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 Gene3D G3DSA:3.30.54.20 132 188 1.6E-25 T 25-04-2017 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 SMART SM00863 171 220 4.0E-24 T 25-04-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 SUPERFAMILY SSF81271 4 63 7.63E-14 T 25-04-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 SUPERFAMILY SSF55681 244 526 1.05E-96 T 25-04-2017 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 6.1E-53 T 25-04-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 6.1E-53 T 25-04-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 6.1E-53 T 25-04-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 6.1E-53 T 25-04-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 6.1E-53 T 25-04-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 SUPERFAMILY SSF55186 66 242 1.31E-67 T 25-04-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 SUPERFAMILY SSF52954 529 634 6.34E-34 T 25-04-2017 IPR004154 Anticodon-binding CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 220 7.8E-15 T 25-04-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 Gene3D G3DSA:3.10.20.30 4 66 1.7E-21 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 68 634 36.104 T 25-04-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 Pfam PF02824 TGS domain 4 62 6.4E-13 T 25-04-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 324 529 8.3E-39 T 25-04-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS05485 af6c5d9275c7e7f9f43d6330277ad59d 638 Gene3D G3DSA:3.40.50.800 531 635 3.7E-37 T 25-04-2017 IPR004154 Anticodon-binding CLFO_RS12885 c210e882a30ed95e31bda442388cd3cb 604 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 33 558 1.9E-102 T 25-04-2017 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 CLFO_RS12885 c210e882a30ed95e31bda442388cd3cb 604 Gene3D G3DSA:1.20.1560.10 32 345 4.4E-48 T 25-04-2017 CLFO_RS12885 c210e882a30ed95e31bda442388cd3cb 604 SMART SM00382 388 574 3.0E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12885 c210e882a30ed95e31bda442388cd3cb 604 SUPERFAMILY SSF90123 32 347 1.83E-56 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS12885 c210e882a30ed95e31bda442388cd3cb 604 SUPERFAMILY SSF52540 358 598 1.92E-91 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12885 c210e882a30ed95e31bda442388cd3cb 604 ProSitePatterns PS00211 ABC transporters family signature. 500 514 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS12885 c210e882a30ed95e31bda442388cd3cb 604 Gene3D G3DSA:3.40.50.300 362 592 4.8E-82 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12885 c210e882a30ed95e31bda442388cd3cb 604 Pfam PF00005 ABC transporter 379 527 7.2E-31 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS12885 c210e882a30ed95e31bda442388cd3cb 604 Pfam PF00664 ABC transporter transmembrane region 47 315 6.8E-24 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS19490 a5745e86af63451d4a2407d67a841210 275 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 10 271 2.3E-133 T 25-04-2017 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CLFO_RS19490 a5745e86af63451d4a2407d67a841210 275 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 275 147.432 T 25-04-2017 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CLFO_RS19490 a5745e86af63451d4a2407d67a841210 275 SUPERFAMILY SSF56276 122 183 2.47E-22 T 25-04-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CLFO_RS19490 a5745e86af63451d4a2407d67a841210 275 SUPERFAMILY SSF56276 50 91 2.47E-22 T 25-04-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CLFO_RS19490 a5745e86af63451d4a2407d67a841210 275 Gene3D G3DSA:3.60.90.10 42 195 2.9E-46 T 25-04-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CLFO_RS19490 a5745e86af63451d4a2407d67a841210 275 Pfam PF02675 S-adenosylmethionine decarboxylase 45 179 5.5E-30 T 25-04-2017 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CLFO_RS19490 a5745e86af63451d4a2407d67a841210 275 PIRSF PIRSF001356 5 273 1.8E-133 T 25-04-2017 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CLFO_RS20795 20b61c8395d64331ff593655d890db32 135 Pfam PF09391 Protein of unknown function (DUF2000) 1 135 1.7E-40 T 25-04-2017 IPR018988 Protein of unknown function DUF2000 CLFO_RS20795 20b61c8395d64331ff593655d890db32 135 SUPERFAMILY SSF102462 1 135 2.25E-34 T 25-04-2017 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 CLFO_RS20795 20b61c8395d64331ff593655d890db32 135 Gene3D G3DSA:3.40.1490.10 1 135 1.1E-29 T 25-04-2017 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 CLFO_RS20795 20b61c8395d64331ff593655d890db32 135 PIRSF PIRSF033736 1 135 4.1E-37 T 25-04-2017 IPR017021 Uncharacterised conserved protein UCP033763 CLFO_RS01475 b489a1daa314e607e6de104768e4b751 337 Pfam PF02719 Polysaccharide biosynthesis protein 7 286 1.4E-105 T 25-04-2017 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CLFO_RS01475 b489a1daa314e607e6de104768e4b751 337 SUPERFAMILY SSF51735 1 279 2.31E-51 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01475 b489a1daa314e607e6de104768e4b751 337 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 328 2.3E-163 T 25-04-2017 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 CLFO_RS01475 b489a1daa314e607e6de104768e4b751 337 Gene3D G3DSA:3.40.50.720 3 225 6.9E-45 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS13960 bc0f237749991c460931d7b9e8d8b609 212 Pfam PF01066 CDP-alcohol phosphatidyltransferase 41 105 2.3E-11 T 25-04-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLFO_RS13960 bc0f237749991c460931d7b9e8d8b609 212 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 83 105 - T 25-04-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLFO_RS09635 df1c91c85068a6b97f6202077d6abb9f 144 SUPERFAMILY SSF52304 3 142 5.23E-56 T 25-04-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS09635 df1c91c85068a6b97f6202077d6abb9f 144 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 138 8.0E-42 T 25-04-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS09635 df1c91c85068a6b97f6202077d6abb9f 144 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 25-04-2017 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS09635 df1c91c85068a6b97f6202077d6abb9f 144 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 144 60.399 T 25-04-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS09635 df1c91c85068a6b97f6202077d6abb9f 144 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 140 3.6E-57 T 25-04-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS09635 df1c91c85068a6b97f6202077d6abb9f 144 PIRSF PIRSF001399 1 144 2.5E-59 T 25-04-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS09635 df1c91c85068a6b97f6202077d6abb9f 144 Gene3D G3DSA:3.40.50.9100 3 142 4.0E-59 T 25-04-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS09635 df1c91c85068a6b97f6202077d6abb9f 144 Pfam PF01220 Dehydroquinase class II 4 138 2.0E-55 T 25-04-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS15040 41e0856ffd686c29af257f90a90e36e4 482 Pfam PF12704 MacB-like periplasmic core domain 25 287 4.9E-8 T 25-04-2017 IPR025857 MacB-like periplasmic core domain CLFO_RS15040 41e0856ffd686c29af257f90a90e36e4 482 Pfam PF02687 FtsX-like permease family 321 474 4.3E-31 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS17410 5a4f4f77ef983b081a7ce13dc473503a 452 Gene3D G3DSA:2.40.50.140 2 78 7.7E-25 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS17410 5a4f4f77ef983b081a7ce13dc473503a 452 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 432 442 - T 25-04-2017 IPR030391 RNA methyltransferase TrmA, conserved site CLFO_RS17410 5a4f4f77ef983b081a7ce13dc473503a 452 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 16 442 1.4E-161 T 25-04-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CLFO_RS17410 5a4f4f77ef983b081a7ce13dc473503a 452 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 89 446 3.2E-21 T 25-04-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CLFO_RS17410 5a4f4f77ef983b081a7ce13dc473503a 452 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 380 411 - T 25-04-2017 IPR030390 RNA methyltransferase TrmA, active site CLFO_RS17410 5a4f4f77ef983b081a7ce13dc473503a 452 SUPERFAMILY SSF50249 2 58 2.34E-13 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS17410 5a4f4f77ef983b081a7ce13dc473503a 452 Pfam PF01938 TRAM domain 4 57 1.3E-9 T 25-04-2017 IPR002792 TRAM domain CLFO_RS17410 5a4f4f77ef983b081a7ce13dc473503a 452 SUPERFAMILY SSF53335 66 447 3.08E-91 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS17410 5a4f4f77ef983b081a7ce13dc473503a 452 Gene3D G3DSA:3.40.50.150 243 445 8.8E-74 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10920 51179cc1bc6bcabf7d5255411d3951bb 336 SUPERFAMILY SSF50156 79 185 4.6E-18 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS10920 51179cc1bc6bcabf7d5255411d3951bb 336 Gene3D G3DSA:2.30.42.10 88 186 1.6E-21 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS10920 51179cc1bc6bcabf7d5255411d3951bb 336 Pfam PF13180 PDZ domain 119 179 2.2E-9 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS10920 51179cc1bc6bcabf7d5255411d3951bb 336 Pfam PF02163 Peptidase family M50 7 321 2.2E-74 T 25-04-2017 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 CLFO_RS10920 51179cc1bc6bcabf7d5255411d3951bb 336 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 120 333 6.6E-52 T 25-04-2017 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CLFO_RS10920 51179cc1bc6bcabf7d5255411d3951bb 336 SMART SM00228 103 176 5.3E-7 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS13780 f542e1970aeacb5595edc4dbb4fdfe11 255 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS13780 f542e1970aeacb5595edc4dbb4fdfe11 255 Pfam PF00005 ABC transporter 28 168 7.0E-31 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS13780 f542e1970aeacb5595edc4dbb4fdfe11 255 Gene3D G3DSA:3.40.50.300 3 223 1.3E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13780 f542e1970aeacb5595edc4dbb4fdfe11 255 SUPERFAMILY SSF52540 27 240 2.26E-69 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13780 f542e1970aeacb5595edc4dbb4fdfe11 255 SMART SM00382 37 217 9.5E-15 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS19705 ca1a22099b1a2a4c5ea73f9c80773733 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 203 1.7E-91 T 25-04-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19705 ca1a22099b1a2a4c5ea73f9c80773733 210 Gene3D G3DSA:4.10.960.10 76 156 4.4E-35 T 25-04-2017 CLFO_RS19705 ca1a22099b1a2a4c5ea73f9c80773733 210 SUPERFAMILY SSF50447 1 208 9.71E-83 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS19705 ca1a22099b1a2a4c5ea73f9c80773733 210 Pfam PF00297 Ribosomal protein L3 97 181 3.0E-16 T 25-04-2017 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19705 ca1a22099b1a2a4c5ea73f9c80773733 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 25-04-2017 IPR019926 Ribosomal protein L3, conserved site CLFO_RS19705 ca1a22099b1a2a4c5ea73f9c80773733 210 Gene3D G3DSA:2.40.30.10 3 32 2.4E-13 T 25-04-2017 CLFO_RS19705 ca1a22099b1a2a4c5ea73f9c80773733 210 Gene3D G3DSA:2.40.30.10 157 208 2.4E-13 T 25-04-2017 CLFO_RS19705 ca1a22099b1a2a4c5ea73f9c80773733 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 206 41.242 T 25-04-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS02340 b95e576a08a682ada06636d801289d0b 71 Gene3D G3DSA:2.30.30.90 23 69 2.3E-4 T 25-04-2017 CLFO_RS02340 b95e576a08a682ada06636d801289d0b 71 SUPERFAMILY SSF50037 6 70 1.14E-11 T 25-04-2017 IPR008988 Transcriptional repressor, C-terminal CLFO_RS02340 b95e576a08a682ada06636d801289d0b 71 Pfam PF04023 FeoA domain 1 68 1.0E-11 T 25-04-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLFO_RS02340 b95e576a08a682ada06636d801289d0b 71 SMART SM00899 1 69 1.6E-13 T 25-04-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLFO_RS14845 a3e2797f4911201c1d94afffe844ce92 565 Pfam PF00005 ABC transporter 356 505 7.3E-24 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS14845 a3e2797f4911201c1d94afffe844ce92 565 Gene3D G3DSA:3.40.50.300 340 550 1.8E-54 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14845 a3e2797f4911201c1d94afffe844ce92 565 Pfam PF00664 ABC transporter transmembrane region 34 291 3.7E-26 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS14845 a3e2797f4911201c1d94afffe844ce92 565 SUPERFAMILY SSF52540 335 548 6.85E-56 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14845 a3e2797f4911201c1d94afffe844ce92 565 Gene3D G3DSA:1.20.1560.10 9 318 7.0E-46 T 25-04-2017 CLFO_RS14845 a3e2797f4911201c1d94afffe844ce92 565 SMART SM00382 364 552 8.2E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS14845 a3e2797f4911201c1d94afffe844ce92 565 SUPERFAMILY SSF90123 9 320 3.66E-48 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS03365 c9e3ac92511b60394cc8ed7e04dc7592 190 Pfam PF05685 Putative restriction endonuclease 14 183 3.6E-33 T 25-04-2017 IPR008538 Domain of unknown function DUF820 CLFO_RS03365 c9e3ac92511b60394cc8ed7e04dc7592 190 SUPERFAMILY SSF52980 3 187 1.23E-38 T 25-04-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLFO_RS03365 c9e3ac92511b60394cc8ed7e04dc7592 190 Gene3D G3DSA:3.90.1570.10 5 187 2.5E-41 T 25-04-2017 IPR012296 Nuclease, putative, TT1808 CLFO_RS09905 2e7f9a76304fa09419b3f74825f6cdbc 238 Pfam PF00440 Bacterial regulatory proteins, tetR family 52 96 1.6E-6 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS09905 2e7f9a76304fa09419b3f74825f6cdbc 238 SUPERFAMILY SSF46689 43 105 1.12E-13 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09905 2e7f9a76304fa09419b3f74825f6cdbc 238 Gene3D G3DSA:1.10.357.10 39 223 9.8E-18 T 25-04-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLFO_RS18765 874b85ec4e515e5ed256ba7eb2c2ef45 281 Pfam PF08721 TnsA endonuclease C terminal 172 254 2.2E-19 T 25-04-2017 IPR014832 TnsA endonuclease C-terminal CLFO_RS18765 874b85ec4e515e5ed256ba7eb2c2ef45 281 Gene3D G3DSA:1.10.10.10 177 259 2.4E-10 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18765 874b85ec4e515e5ed256ba7eb2c2ef45 281 SUPERFAMILY SSF52980 10 173 4.93E-58 T 25-04-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLFO_RS18765 874b85ec4e515e5ed256ba7eb2c2ef45 281 Pfam PF08722 TnsA endonuclease N terminal 74 170 1.9E-16 T 25-04-2017 IPR014833 TnsA endonuclease, N-terminal CLFO_RS18765 874b85ec4e515e5ed256ba7eb2c2ef45 281 Gene3D G3DSA:3.40.1350.10 8 173 3.8E-58 T 25-04-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 CLFO_RS13665 40e888d3f26e12cf14120eb8bf528ead 300 PIRSF PIRSF004869 2 300 1.7E-83 T 25-04-2017 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted CLFO_RS13665 40e888d3f26e12cf14120eb8bf528ead 300 Gene3D G3DSA:3.20.20.70 81 293 1.9E-16 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS13665 40e888d3f26e12cf14120eb8bf528ead 300 Pfam PF13353 4Fe-4S single cluster domain 77 127 4.5E-5 T 25-04-2017 CLFO_RS13665 40e888d3f26e12cf14120eb8bf528ead 300 Pfam PF04055 Radical SAM superfamily 78 206 6.6E-9 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS13665 40e888d3f26e12cf14120eb8bf528ead 300 SUPERFAMILY SSF102114 81 286 6.47E-13 T 25-04-2017 CLFO_RS00285 cd7d1378a9041acad773fb36f64c37b4 325 SMART SM01004 2 321 7.8E-231 T 25-04-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00285 cd7d1378a9041acad773fb36f64c37b4 325 SUPERFAMILY SSF51569 4 323 1.76E-144 T 25-04-2017 CLFO_RS00285 cd7d1378a9041acad773fb36f64c37b4 325 Pfam PF00490 Delta-aminolevulinic acid dehydratase 5 320 3.5E-154 T 25-04-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00285 cd7d1378a9041acad773fb36f64c37b4 325 PIRSF PIRSF001415 1 324 5.4E-153 T 25-04-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00285 cd7d1378a9041acad773fb36f64c37b4 325 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 25-04-2017 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00285 cd7d1378a9041acad773fb36f64c37b4 325 Gene3D G3DSA:3.20.20.70 3 323 1.0E-154 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS00285 cd7d1378a9041acad773fb36f64c37b4 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 3.5E-61 T 25-04-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00285 cd7d1378a9041acad773fb36f64c37b4 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 3.5E-61 T 25-04-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00285 cd7d1378a9041acad773fb36f64c37b4 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 120 134 3.5E-61 T 25-04-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00285 cd7d1378a9041acad773fb36f64c37b4 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 150 169 3.5E-61 T 25-04-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00285 cd7d1378a9041acad773fb36f64c37b4 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 188 207 3.5E-61 T 25-04-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS00285 cd7d1378a9041acad773fb36f64c37b4 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 3.5E-61 T 25-04-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CLFO_RS19660 f7cfd6c3a7618efeabbb6734405a95c3 93 Pfam PF00366 Ribosomal protein S17 20 87 6.5E-34 T 25-04-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19660 f7cfd6c3a7618efeabbb6734405a95c3 93 PRINTS PR00973 Ribosomal protein S17 family signature 66 76 9.4E-13 T 25-04-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19660 f7cfd6c3a7618efeabbb6734405a95c3 93 PRINTS PR00973 Ribosomal protein S17 family signature 76 83 9.4E-13 T 25-04-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19660 f7cfd6c3a7618efeabbb6734405a95c3 93 PRINTS PR00973 Ribosomal protein S17 family signature 34 57 9.4E-13 T 25-04-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19660 f7cfd6c3a7618efeabbb6734405a95c3 93 ProSitePatterns PS00056 Ribosomal protein S17 signature. 66 78 - T 25-04-2017 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19660 f7cfd6c3a7618efeabbb6734405a95c3 93 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 15 86 8.0E-32 T 25-04-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19660 f7cfd6c3a7618efeabbb6734405a95c3 93 Gene3D G3DSA:2.40.50.140 14 92 8.6E-37 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS19660 f7cfd6c3a7618efeabbb6734405a95c3 93 SUPERFAMILY SSF50249 14 92 3.17E-32 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS19660 f7cfd6c3a7618efeabbb6734405a95c3 93 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 15 86 2.5E-37 T 25-04-2017 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19660 f7cfd6c3a7618efeabbb6734405a95c3 93 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 13 91 26.38 T 25-04-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS21180 79bace311d7cc36edc2784216309e4be 708 Gene3D G3DSA:3.30.420.10 304 466 5.6E-8 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS21180 79bace311d7cc36edc2784216309e4be 708 Pfam PF09299 Mu transposase, C-terminal 513 571 9.5E-8 T 25-04-2017 IPR015378 Transposase-like, Mu, C-terminal CLFO_RS21180 79bace311d7cc36edc2784216309e4be 708 Pfam PF00665 Integrase core domain 303 416 2.0E-8 T 25-04-2017 IPR001584 Integrase, catalytic core GO:0015074 CLFO_RS21180 79bace311d7cc36edc2784216309e4be 708 SUPERFAMILY SSF53098 290 472 1.37E-5 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS15155 60e0d6f22244b4e5c6307b4bcd3b24f6 202 SUPERFAMILY SSF51206 4 119 1.7E-28 T 25-04-2017 IPR018490 Cyclic nucleotide-binding-like CLFO_RS15155 60e0d6f22244b4e5c6307b4bcd3b24f6 202 Pfam PF13545 Crp-like helix-turn-helix domain 125 197 1.6E-19 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS15155 60e0d6f22244b4e5c6307b4bcd3b24f6 202 Gene3D G3DSA:1.10.10.10 126 200 1.1E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15155 60e0d6f22244b4e5c6307b4bcd3b24f6 202 SMART SM00100 1 104 1.3E-7 T 25-04-2017 IPR000595 Cyclic nucleotide-binding domain CLFO_RS15155 60e0d6f22244b4e5c6307b4bcd3b24f6 202 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 165 180 1.2E-9 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS15155 60e0d6f22244b4e5c6307b4bcd3b24f6 202 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 149 165 1.2E-9 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS15155 60e0d6f22244b4e5c6307b4bcd3b24f6 202 SMART SM00419 143 192 3.3E-15 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS15155 60e0d6f22244b4e5c6307b4bcd3b24f6 202 Pfam PF00027 Cyclic nucleotide-binding domain 5 90 3.5E-20 T 25-04-2017 IPR000595 Cyclic nucleotide-binding domain CLFO_RS15155 60e0d6f22244b4e5c6307b4bcd3b24f6 202 Gene3D G3DSA:2.60.120.10 5 125 2.1E-26 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS15155 60e0d6f22244b4e5c6307b4bcd3b24f6 202 SUPERFAMILY SSF46785 121 200 2.05E-20 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18230 fba2eb236db099c91b2f4fa0fb677b5b 361 Pfam PF03845 Spore germination protein 6 311 6.9E-60 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS18230 fba2eb236db099c91b2f4fa0fb677b5b 361 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 6 356 1.7E-67 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS04595 512af7b6ef4b867a25b74f330e699d1b 576 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 223 558 3.5E-76 T 25-04-2017 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS04595 512af7b6ef4b867a25b74f330e699d1b 576 SUPERFAMILY SSF48310 214 575 1.83E-94 T 25-04-2017 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS04595 512af7b6ef4b867a25b74f330e699d1b 576 Gene3D G3DSA:1.10.569.10 245 420 2.1E-49 T 25-04-2017 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 CLFO_RS04595 512af7b6ef4b867a25b74f330e699d1b 576 SMART SM00790 1 208 1.7E-86 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS04595 512af7b6ef4b867a25b74f330e699d1b 576 Gene3D G3DSA:3.60.9.10 1 209 1.3E-67 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS04595 512af7b6ef4b867a25b74f330e699d1b 576 SUPERFAMILY SSF56228 2 209 9.81E-57 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS04595 512af7b6ef4b867a25b74f330e699d1b 576 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 4 205 4.3E-61 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 Pfam PF02779 Transketolase, pyrimidine binding domain 312 473 1.4E-38 T 25-04-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 Gene3D G3DSA:3.40.50.920 488 616 1.0E-29 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 SMART SM00861 313 477 5.4E-63 T 25-04-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 Pfam PF02780 Transketolase, C-terminal domain 488 610 3.1E-26 T 25-04-2017 IPR033248 Transketolase, C-terminal domain CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 Gene3D G3DSA:3.40.50.970 2 186 3.1E-59 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 Gene3D G3DSA:3.40.50.970 234 296 3.1E-59 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 ProSitePatterns PS00801 Transketolase signature 1. 27 46 - T 25-04-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 1 619 45.184 T 25-04-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 Gene3D G3DSA:3.40.50.970 297 487 2.8E-73 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 ProSitePatterns PS00802 Transketolase signature 2. 419 435 - T 25-04-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 3 617 2.5E-252 T 25-04-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 SUPERFAMILY SSF52518 2 190 1.17E-78 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 SUPERFAMILY SSF52518 238 375 1.17E-78 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 2 277 1.2E-124 T 25-04-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 SUPERFAMILY SSF52922 484 616 1.31E-28 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS09740 fa1321cec6044120486af0c5a32bee6c 629 SUPERFAMILY SSF52518 311 497 6.77E-56 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 Gene3D G3DSA:3.40.50.1000 451 593 1.8E-45 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 Gene3D G3DSA:3.40.50.1000 295 335 1.8E-45 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 Pfam PF00122 E1-E2 ATPase 103 313 7.1E-66 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 SUPERFAMILY SSF56784 380 624 5.39E-52 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 SUPERFAMILY SSF56784 320 340 5.39E-52 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 524 543 8.0E-21 T 25-04-2017 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 548 560 8.0E-21 T 25-04-2017 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 180 194 8.0E-21 T 25-04-2017 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 322 336 8.0E-21 T 25-04-2017 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 Gene3D G3DSA:3.40.1110.10 336 450 7.6E-20 T 25-04-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 324 330 - T 25-04-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 103 605 1.6E-81 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 Gene3D G3DSA:2.70.150.10 125 230 1.4E-30 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 82 626 1.4E-175 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 Pfam PF00702 haloacid dehalogenase-like hydrolase 318 538 2.0E-40 T 25-04-2017 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 82 627 2.3E-133 T 25-04-2017 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 SUPERFAMILY SSF81653 133 230 1.15E-26 T 25-04-2017 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 SUPERFAMILY SSF81665 231 316 4.05E-16 T 25-04-2017 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 SUPERFAMILY SSF81665 574 604 4.05E-16 T 25-04-2017 CLFO_RS18560 3dfa6fd81603549b9099264ea7ac3745 632 SUPERFAMILY SSF81665 83 134 4.05E-16 T 25-04-2017 CLFO_RS13705 c9b3df91dd9b54d6eb9db482c0f1cd48 296 Pfam PF00892 EamA-like transporter family 142 282 4.3E-17 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS13705 c9b3df91dd9b54d6eb9db482c0f1cd48 296 Pfam PF00892 EamA-like transporter family 9 130 2.2E-12 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS13705 c9b3df91dd9b54d6eb9db482c0f1cd48 296 SUPERFAMILY SSF103481 40 134 1.11E-11 T 25-04-2017 CLFO_RS13705 c9b3df91dd9b54d6eb9db482c0f1cd48 296 SUPERFAMILY SSF103481 196 288 1.7E-12 T 25-04-2017 CLFO_RS13205 d096d04cf2c165fd3f6c73bb6113d187 294 Pfam PF03466 LysR substrate binding domain 92 291 7.5E-31 T 25-04-2017 IPR005119 LysR, substrate-binding CLFO_RS13205 d096d04cf2c165fd3f6c73bb6113d187 294 Gene3D G3DSA:1.10.10.10 4 81 1.8E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13205 d096d04cf2c165fd3f6c73bb6113d187 294 SUPERFAMILY SSF53850 92 292 2.31E-33 T 25-04-2017 CLFO_RS13205 d096d04cf2c165fd3f6c73bb6113d187 294 SUPERFAMILY SSF46785 3 112 5.44E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13205 d096d04cf2c165fd3f6c73bb6113d187 294 Gene3D G3DSA:3.40.190.10 91 194 2.1E-20 T 25-04-2017 CLFO_RS13205 d096d04cf2c165fd3f6c73bb6113d187 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.3E-20 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS13205 d096d04cf2c165fd3f6c73bb6113d187 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.6E-9 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS13205 d096d04cf2c165fd3f6c73bb6113d187 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.6E-9 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS13205 d096d04cf2c165fd3f6c73bb6113d187 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.6E-9 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS13205 d096d04cf2c165fd3f6c73bb6113d187 294 Gene3D G3DSA:3.40.190.10 195 257 1.5E-10 T 25-04-2017 CLFO_RS17635 3a2e9e0144a9d24b9dff0348ec4fae81 122 SUPERFAMILY SSF52833 28 118 9.69E-18 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS17635 3a2e9e0144a9d24b9dff0348ec4fae81 122 Gene3D G3DSA:3.40.30.10 28 119 1.7E-21 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS17655 3a2e9e0144a9d24b9dff0348ec4fae81 122 SUPERFAMILY SSF52833 28 118 9.69E-18 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS17655 3a2e9e0144a9d24b9dff0348ec4fae81 122 Gene3D G3DSA:3.40.30.10 28 119 1.7E-21 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 25-04-2017 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 SMART SM01383 42 118 1.1E-44 T 25-04-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 PIRSF PIRSF002158 3 276 9.8E-99 T 25-04-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 3.2E-57 T 25-04-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 Gene3D G3DSA:2.30.30.30 119 195 7.3E-36 T 25-04-2017 IPR014722 Ribosomal protein L2 domain 2 CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 276 5.3E-138 T 25-04-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.9E-33 T 25-04-2017 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 SUPERFAMILY SSF50249 3 125 5.14E-50 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 Gene3D G3DSA:4.10.950.10 196 275 5.4E-36 T 25-04-2017 IPR014726 Ribosomal protein L2, domain 3 CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 Gene3D G3DSA:2.40.50.140 1 114 9.2E-53 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 SUPERFAMILY SSF50104 126 273 1.14E-62 T 25-04-2017 IPR008991 Translation protein SH3-like domain CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 SMART SM01382 124 253 9.2E-96 T 25-04-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CLFO_RS19690 366336279d28d784b1a8d6ea8a7a74ad 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 49.403 T 25-04-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS01650 67ab4e47c7f0691c75f75a46eee46b62 115 Gene3D G3DSA:3.30.160.170 24 111 2.2E-25 T 25-04-2017 IPR005186 FlaG protein CLFO_RS01650 67ab4e47c7f0691c75f75a46eee46b62 115 SUPERFAMILY SSF160214 32 115 1.27E-24 T 25-04-2017 IPR005186 FlaG protein CLFO_RS01650 67ab4e47c7f0691c75f75a46eee46b62 115 Pfam PF03646 FlaG protein 24 113 7.7E-25 T 25-04-2017 IPR005186 FlaG protein CLFO_RS16525 0980a5f3bf1a3743dce989d517e0b833 101 Pfam PF00936 BMC domain 34 90 4.9E-6 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS16525 0980a5f3bf1a3743dce989d517e0b833 101 SUPERFAMILY SSF143414 33 92 3.92E-9 T 25-04-2017 CLFO_RS16525 0980a5f3bf1a3743dce989d517e0b833 101 SMART SM00877 33 100 3.1E-6 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS19635 02993d280abb24578fb0e958c43f9ae0 132 Gene3D G3DSA:3.30.1370.30 2 73 1.4E-30 T 25-04-2017 CLFO_RS19635 02993d280abb24578fb0e958c43f9ae0 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 25-04-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19635 02993d280abb24578fb0e958c43f9ae0 132 Gene3D G3DSA:3.30.1490.10 76 132 7.8E-29 T 25-04-2017 CLFO_RS19635 02993d280abb24578fb0e958c43f9ae0 132 Pfam PF00410 Ribosomal protein S8 5 132 3.3E-52 T 25-04-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19635 02993d280abb24578fb0e958c43f9ae0 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 33.187 T 25-04-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19635 02993d280abb24578fb0e958c43f9ae0 132 SUPERFAMILY SSF56047 3 132 1.44E-47 T 25-04-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS02365 deed0a00cf99eb1b501177d00253bcd3 327 SUPERFAMILY SSF55326 4 143 7.15E-24 T 25-04-2017 CLFO_RS02365 deed0a00cf99eb1b501177d00253bcd3 327 PIRSF PIRSF005644 1 327 2.6E-82 T 25-04-2017 IPR011854 Hydrogenase expression/formation protein HypE CLFO_RS02365 deed0a00cf99eb1b501177d00253bcd3 327 SUPERFAMILY SSF56042 145 310 7.92E-36 T 25-04-2017 IPR010918 AIR synthase-related protein, C-terminal domain CLFO_RS02365 deed0a00cf99eb1b501177d00253bcd3 327 Gene3D G3DSA:3.90.650.10 148 313 2.7E-26 T 25-04-2017 IPR010918 AIR synthase-related protein, C-terminal domain CLFO_RS02365 deed0a00cf99eb1b501177d00253bcd3 327 Pfam PF00586 AIR synthase related protein, N-terminal domain 34 137 1.9E-12 T 25-04-2017 IPR016188 PurM-like, N-terminal domain CLFO_RS02365 deed0a00cf99eb1b501177d00253bcd3 327 Gene3D G3DSA:3.30.1330.10 4 141 2.1E-23 T 25-04-2017 IPR016188 PurM-like, N-terminal domain CLFO_RS02365 deed0a00cf99eb1b501177d00253bcd3 327 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 306 1.5E-24 T 25-04-2017 IPR010918 AIR synthase-related protein, C-terminal domain CLFO_RS01085 96bbcfff351276c70c34365b48ff6568 264 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 25-04-2017 IPR019776 Flagellar basal body rod protein, conserved site CLFO_RS01085 96bbcfff351276c70c34365b48ff6568 264 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 186 262 9.4E-26 T 25-04-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLFO_RS01085 96bbcfff351276c70c34365b48ff6568 264 Pfam PF00460 Flagella basal body rod protein 4 34 1.4E-12 T 25-04-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLFO_RS01085 96bbcfff351276c70c34365b48ff6568 264 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 3 262 3.4E-85 T 25-04-2017 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CLFO_RS01085 96bbcfff351276c70c34365b48ff6568 264 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 243 9.7E-54 T 25-04-2017 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 CLFO_RS01085 96bbcfff351276c70c34365b48ff6568 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 150 245 2.0E-28 T 25-04-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLFO_RS01085 96bbcfff351276c70c34365b48ff6568 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 136 5.1E-46 T 25-04-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLFO_RS01085 96bbcfff351276c70c34365b48ff6568 264 SUPERFAMILY SSF117143 89 224 9.02E-31 T 25-04-2017 CLFO_RS21250 ab9d413a6f08882f6ee656bd832eb3c7 682 TIGRFAM TIGR02653 Lon_rel_chp: conserved hypothetical protein 9 681 0.0 T 25-04-2017 IPR013473 Conserved hypothetical protein CHP02653, peptidase S16 non-peptidase homologue CLFO_RS21250 ab9d413a6f08882f6ee656bd832eb3c7 682 TIGRFAM TIGR02688 TIGR02688: TIGR02688 family protein 14 463 1.1E-193 T 25-04-2017 IPR014061 Conserved hypothetical protein CHP02688 CLFO_RS21250 ab9d413a6f08882f6ee656bd832eb3c7 682 SUPERFAMILY SSF54211 501 681 4.17E-25 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS21250 ab9d413a6f08882f6ee656bd832eb3c7 682 Gene3D G3DSA:3.30.230.10 501 679 5.8E-21 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS21250 ab9d413a6f08882f6ee656bd832eb3c7 682 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 518 679 7.4E-10 T 25-04-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CLFO_RS21250 ab9d413a6f08882f6ee656bd832eb3c7 682 Pfam PF13337 Putative ATP-dependent Lon protease 17 472 3.4E-210 T 25-04-2017 IPR014061 Conserved hypothetical protein CHP02688 CLFO_RS00915 62f17ef8b9a19d88627f67f63bbac6c0 311 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 56 299 4.0E-83 T 25-04-2017 IPR010787 Protein of unknown function DUF1385 CLFO_RS00915 62f17ef8b9a19d88627f67f63bbac6c0 311 Pfam PF07136 Protein of unknown function (DUF1385) 56 302 1.1E-91 T 25-04-2017 IPR010787 Protein of unknown function DUF1385 CLFO_RS07300 255ca3adc4d7c7a0e04d0c258b9a4e1f 82 Gene3D G3DSA:2.10.260.10 1 52 2.5E-27 T 25-04-2017 CLFO_RS07300 255ca3adc4d7c7a0e04d0c258b9a4e1f 82 SUPERFAMILY SSF89447 1 53 3.14E-16 T 25-04-2017 CLFO_RS07300 255ca3adc4d7c7a0e04d0c258b9a4e1f 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 3.9E-12 T 25-04-2017 IPR007159 SpoVT-AbrB domain GO:0003677 CLFO_RS07300 255ca3adc4d7c7a0e04d0c258b9a4e1f 82 SMART SM00966 8 51 1.1E-9 T 25-04-2017 IPR007159 SpoVT-AbrB domain GO:0003677 CLFO_RS07300 255ca3adc4d7c7a0e04d0c258b9a4e1f 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 46 4.7E-14 T 25-04-2017 IPR007159 SpoVT-AbrB domain GO:0003677 CLFO_RS09495 b60f88d1a4dc0042636387217271b362 270 SUPERFAMILY SSF52540 5 254 4.75E-54 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09495 b60f88d1a4dc0042636387217271b362 270 Gene3D G3DSA:3.40.50.300 5 256 1.4E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09495 b60f88d1a4dc0042636387217271b362 270 SMART SM00382 34 232 5.9E-13 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS09495 b60f88d1a4dc0042636387217271b362 270 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS09495 b60f88d1a4dc0042636387217271b362 270 Pfam PF00005 ABC transporter 26 182 9.9E-24 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS16850 c33fa14f36eed57c5b8ff65ea150fbb3 458 Gene3D G3DSA:1.10.40.30 407 458 7.9E-12 T 25-04-2017 CLFO_RS16850 c33fa14f36eed57c5b8ff65ea150fbb3 458 SUPERFAMILY SSF48557 7 455 1.57E-119 T 25-04-2017 IPR008948 L-Aspartase-like GO:0003824 CLFO_RS16850 c33fa14f36eed57c5b8ff65ea150fbb3 458 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.1E-20 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS16850 c33fa14f36eed57c5b8ff65ea150fbb3 458 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 1.1E-20 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS16850 c33fa14f36eed57c5b8ff65ea150fbb3 458 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 1.1E-20 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS16850 c33fa14f36eed57c5b8ff65ea150fbb3 458 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 1.1E-20 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS16850 c33fa14f36eed57c5b8ff65ea150fbb3 458 Gene3D G3DSA:1.10.275.10 6 137 1.1E-51 T 25-04-2017 IPR024083 Fumarase/histidase, N-terminal CLFO_RS16850 c33fa14f36eed57c5b8ff65ea150fbb3 458 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 25-04-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 CLFO_RS16850 c33fa14f36eed57c5b8ff65ea150fbb3 458 Pfam PF00206 Lyase 16 341 2.5E-83 T 25-04-2017 IPR022761 Fumarate lyase, N-terminal CLFO_RS16850 c33fa14f36eed57c5b8ff65ea150fbb3 458 Pfam PF10415 Fumarase C C-terminus 407 458 2.6E-10 T 25-04-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CLFO_RS16850 c33fa14f36eed57c5b8ff65ea150fbb3 458 Gene3D G3DSA:1.20.200.10 138 401 2.6E-74 T 25-04-2017 CLFO_RS09825 8500392d3af6564b17029db6bc468673 390 PIRSF PIRSF001491 1 389 6.1E-158 T 25-04-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CLFO_RS09825 8500392d3af6564b17029db6bc468673 390 Pfam PF01676 Metalloenzyme superfamily 4 375 2.2E-41 T 25-04-2017 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CLFO_RS09825 8500392d3af6564b17029db6bc468673 390 SUPERFAMILY SSF143856 99 214 2.22E-48 T 25-04-2017 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CLFO_RS09825 8500392d3af6564b17029db6bc468673 390 Gene3D G3DSA:3.40.720.10 218 387 1.8E-78 T 25-04-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLFO_RS09825 8500392d3af6564b17029db6bc468673 390 Gene3D G3DSA:3.40.720.10 2 98 1.8E-78 T 25-04-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLFO_RS09825 8500392d3af6564b17029db6bc468673 390 SUPERFAMILY SSF53649 215 387 5.23E-78 T 25-04-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLFO_RS09825 8500392d3af6564b17029db6bc468673 390 SUPERFAMILY SSF53649 1 99 5.23E-78 T 25-04-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLFO_RS09825 8500392d3af6564b17029db6bc468673 390 Gene3D G3DSA:3.30.70.1250 99 214 7.7E-54 T 25-04-2017 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CLFO_RS09825 8500392d3af6564b17029db6bc468673 390 TIGRFAM TIGR01696 deoB: phosphopentomutase 4 377 1.5E-158 T 25-04-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CLFO_RS09825 8500392d3af6564b17029db6bc468673 390 Hamap MF_00740 Phosphopentomutase [deoB]. 2 385 52.734 T 25-04-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CLFO_RS07910 f0ede802d18b284d550a5051d8b21ed8 385 PIRSF PIRSF005572 1 382 1.3E-128 T 25-04-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CLFO_RS07910 f0ede802d18b284d550a5051d8b21ed8 385 SUPERFAMILY SSF53383 3 377 1.16E-105 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS07910 f0ede802d18b284d550a5051d8b21ed8 385 Gene3D G3DSA:3.90.1150.10 249 374 1.8E-38 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS07910 f0ede802d18b284d550a5051d8b21ed8 385 Pfam PF00266 Aminotransferase class-V 3 367 2.1E-85 T 25-04-2017 IPR000192 Aminotransferase class V domain CLFO_RS07910 f0ede802d18b284d550a5051d8b21ed8 385 Gene3D G3DSA:3.40.640.10 15 248 5.7E-87 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS00600 d3c7dd86d22a4a8788a9234048967d31 96 Pfam PF07873 YabP family 12 77 4.4E-19 T 25-04-2017 IPR022476 Sporulation protein YabP/YqfC CLFO_RS00600 d3c7dd86d22a4a8788a9234048967d31 96 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 12 96 3.0E-17 T 25-04-2017 IPR012504 Sporulation protein YabP CLFO_RS00600 d3c7dd86d22a4a8788a9234048967d31 96 PIRSF PIRSF011576 1 96 1.7E-21 T 25-04-2017 IPR012504 Sporulation protein YabP CLFO_RS00600 d3c7dd86d22a4a8788a9234048967d31 96 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 12 96 3.6E-28 T 25-04-2017 IPR012504 Sporulation protein YabP CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 Gene3D G3DSA:3.40.50.10380 5 157 3.9E-60 T 25-04-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 PIRSF PIRSF000106 4 390 1.4E-90 T 25-04-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 Pfam PF00390 Malic enzyme, N-terminal domain 17 111 3.9E-25 T 25-04-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 SUPERFAMILY SSF53223 6 158 2.01E-59 T 25-04-2017 CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 Pfam PF03949 Malic enzyme, NAD binding domain 162 382 6.2E-26 T 25-04-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 SUPERFAMILY SSF51735 160 389 9.32E-78 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 PRINTS PR00072 Malic enzyme signature 156 172 1.2E-9 T 25-04-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 PRINTS PR00072 Malic enzyme signature 77 99 1.2E-9 T 25-04-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 PRINTS PR00072 Malic enzyme signature 187 203 1.2E-9 T 25-04-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 SMART SM00919 160 383 6.1E-125 T 25-04-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 SMART SM01274 15 148 4.7E-89 T 25-04-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 Gene3D G3DSA:3.40.50.720 158 389 1.3E-81 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15520 4c70efc242b3c9fecbc4c43f83dc30f5 390 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 25-04-2017 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CLFO_RS15960 c10ee0e8c627d9f26156b8ca332eba48 340 Pfam PF00107 Zinc-binding dehydrogenase 170 300 1.3E-18 T 25-04-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLFO_RS15960 c10ee0e8c627d9f26156b8ca332eba48 340 SUPERFAMILY SSF51735 137 308 5.22E-30 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15960 c10ee0e8c627d9f26156b8ca332eba48 340 Gene3D G3DSA:3.90.180.10 1 162 6.4E-60 T 25-04-2017 IPR011032 GroES-like CLFO_RS15960 c10ee0e8c627d9f26156b8ca332eba48 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 25-04-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CLFO_RS15960 c10ee0e8c627d9f26156b8ca332eba48 340 SUPERFAMILY SSF50129 1 169 3.8E-55 T 25-04-2017 IPR011032 GroES-like CLFO_RS15960 c10ee0e8c627d9f26156b8ca332eba48 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 128 4.5E-35 T 25-04-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLFO_RS15960 c10ee0e8c627d9f26156b8ca332eba48 340 SMART SM00829 7 338 2.0E-5 T 25-04-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CLFO_RS15960 c10ee0e8c627d9f26156b8ca332eba48 340 Gene3D G3DSA:3.40.50.720 163 286 9.2E-30 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 Gene3D G3DSA:3.30.930.10 6 239 6.5E-100 T 25-04-2017 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 177.261 T 25-04-2017 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 SUPERFAMILY SSF50447 455 554 2.35E-17 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 857 0.0 T 25-04-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 SMART SM00863 655 698 1.1E-20 T 25-04-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 SUPERFAMILY SSF101353 244 461 3.66E-65 T 25-04-2017 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 2.0E-28 T 25-04-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 2.0E-28 T 25-04-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 197 208 2.0E-28 T 25-04-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 224 237 2.0E-28 T 25-04-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 2.0E-28 T 25-04-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 Pfam PF01411 tRNA synthetases class II (A) 8 557 2.0E-204 T 25-04-2017 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 Pfam PF02272 DHHA1 domain 802 872 4.7E-17 T 25-04-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 Gene3D G3DSA:3.30.980.10 563 623 9.5E-4 T 25-04-2017 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 9.6E-18 T 25-04-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 SUPERFAMILY SSF55186 554 711 1.7E-49 T 25-04-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CLFO_RS09270 4e271662dda6377900b7ca45752b35c1 880 SUPERFAMILY SSF55681 6 243 9.44E-97 T 25-04-2017 CLFO_RS10900 00cb8646704039179d7e86934d56d709 154 SUPERFAMILY SSF74942 86 154 3.01E-16 T 25-04-2017 IPR028998 Ribosome maturation factor RimP, C-terminal CLFO_RS10900 00cb8646704039179d7e86934d56d709 154 Gene3D G3DSA:3.30.300.70 5 82 8.3E-31 T 25-04-2017 IPR028989 Ribosome maturation factor RimP, N-terminal CLFO_RS10900 00cb8646704039179d7e86934d56d709 154 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 154 24.874 T 25-04-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 CLFO_RS10900 00cb8646704039179d7e86934d56d709 154 Pfam PF02576 Putative ribosome maturation factor RimP 13 146 8.9E-46 T 25-04-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 CLFO_RS10900 00cb8646704039179d7e86934d56d709 154 Gene3D G3DSA:2.30.30.180 89 152 1.2E-17 T 25-04-2017 IPR028998 Ribosome maturation factor RimP, C-terminal CLFO_RS10900 00cb8646704039179d7e86934d56d709 154 SUPERFAMILY SSF75420 6 85 1.7E-26 T 25-04-2017 IPR028989 Ribosome maturation factor RimP, N-terminal CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 Pfam PF00467 KOW motif 121 151 1.7E-8 T 25-04-2017 IPR005824 KOW CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 Gene3D G3DSA:3.30.70.940 6 108 1.5E-46 T 25-04-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 SUPERFAMILY SSF50104 116 171 3.91E-18 T 25-04-2017 IPR008991 Translation protein SH3-like domain CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 4 172 24.239 T 25-04-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 Gene3D G3DSA:2.30.30.30 112 170 1.0E-26 T 25-04-2017 IPR014722 Ribosomal protein L2 domain 2 CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 ProSitePatterns PS01014 Transcription termination factor nusG signature. 155 164 - T 25-04-2017 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 7 171 8.6E-63 T 25-04-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 SMART SM00738 4 112 2.1E-47 T 25-04-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 PRINTS PR00338 Transcription termination factor NUSG signature 130 145 5.3E-18 T 25-04-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 PRINTS PR00338 Transcription termination factor NUSG signature 59 71 5.3E-18 T 25-04-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 PRINTS PR00338 Transcription termination factor NUSG signature 148 164 5.3E-18 T 25-04-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 Pfam PF02357 Transcription termination factor nusG 6 108 1.5E-30 T 25-04-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 SUPERFAMILY SSF82679 5 108 2.22E-41 T 25-04-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CLFO_RS19770 7fe5f2d6ae70590cefffed02afa4fec1 172 SMART SM00739 118 145 3.9E-6 T 25-04-2017 IPR005824 KOW CLFO_RS01570 823cb1167922f4330b0c5afa6d0a51b1 120 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 45 89 1.2E-16 T 25-04-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CLFO_RS01570 823cb1167922f4330b0c5afa6d0a51b1 120 Pfam PF02627 Carboxymuconolactone decarboxylase family 28 106 2.9E-20 T 25-04-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CLFO_RS01570 823cb1167922f4330b0c5afa6d0a51b1 120 SUPERFAMILY SSF69118 6 113 3.8E-27 T 25-04-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 CLFO_RS01570 823cb1167922f4330b0c5afa6d0a51b1 120 Gene3D G3DSA:1.20.1290.10 6 113 5.8E-33 T 25-04-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 CLFO_RS07570 0bf24bcf562732cdf27fc880083ba965 197 SUPERFAMILY SSF53955 22 192 1.31E-44 T 25-04-2017 IPR023346 Lysozyme-like domain CLFO_RS07570 0bf24bcf562732cdf27fc880083ba965 197 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 69 97 - T 25-04-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CLFO_RS07570 0bf24bcf562732cdf27fc880083ba965 197 Gene3D G3DSA:1.10.530.10 44 196 5.3E-50 T 25-04-2017 CLFO_RS07570 0bf24bcf562732cdf27fc880083ba965 197 Pfam PF01464 Transglycosylase SLT domain 52 160 5.3E-31 T 25-04-2017 IPR008258 Transglycosylase SLT domain 1 CLFO_RS12500 e68640e029335cdc280de22759981582 609 Gene3D G3DSA:1.20.1270.10 504 575 5.2E-25 T 25-04-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 Gene3D G3DSA:3.30.30.30 39 100 1.3E-17 T 25-04-2017 CLFO_RS12500 e68640e029335cdc280de22759981582 609 SUPERFAMILY SSF53067 1 159 1.78E-60 T 25-04-2017 CLFO_RS12500 e68640e029335cdc280de22759981582 609 PRINTS PR00301 70kDa heat shock protein signature 360 379 7.9E-81 T 25-04-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 PRINTS PR00301 70kDa heat shock protein signature 306 322 7.9E-81 T 25-04-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 PRINTS PR00301 70kDa heat shock protein signature 54 62 7.9E-81 T 25-04-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.9E-81 T 25-04-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 PRINTS PR00301 70kDa heat shock protein signature 114 134 7.9E-81 T 25-04-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 PRINTS PR00301 70kDa heat shock protein signature 337 357 7.9E-81 T 25-04-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 PRINTS PR00301 70kDa heat shock protein signature 174 184 7.9E-81 T 25-04-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.9E-81 T 25-04-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 PRINTS PR00301 70kDa heat shock protein signature 441 457 7.9E-81 T 25-04-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 SUPERFAMILY SSF53067 163 354 3.24E-67 T 25-04-2017 CLFO_RS12500 e68640e029335cdc280de22759981582 609 Gene3D G3DSA:3.30.420.40 3 38 3.7E-60 T 25-04-2017 CLFO_RS12500 e68640e029335cdc280de22759981582 609 Gene3D G3DSA:3.30.420.40 101 166 3.7E-60 T 25-04-2017 CLFO_RS12500 e68640e029335cdc280de22759981582 609 Gene3D G3DSA:2.60.34.10 362 503 3.8E-73 T 25-04-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 25-04-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 SUPERFAMILY SSF100920 356 512 1.27E-62 T 25-04-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 576 4.5E-292 T 25-04-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 25-04-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 Gene3D G3DSA:3.30.420.40 167 201 2.3E-34 T 25-04-2017 CLFO_RS12500 e68640e029335cdc280de22759981582 609 Gene3D G3DSA:3.30.420.40 291 333 2.3E-34 T 25-04-2017 CLFO_RS12500 e68640e029335cdc280de22759981582 609 SUPERFAMILY SSF100934 479 580 4.71E-14 T 25-04-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 603 37.612 T 25-04-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 Gene3D G3DSA:3.90.640.10 202 287 2.3E-30 T 25-04-2017 CLFO_RS12500 e68640e029335cdc280de22759981582 609 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 25-04-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLFO_RS12500 e68640e029335cdc280de22759981582 609 Pfam PF00012 Hsp70 protein 4 576 2.9E-251 T 25-04-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CLFO_RS12150 0f74a7e4c09acf62e971d12a38c75795 147 Pfam PF07883 Cupin domain 49 124 4.7E-15 T 25-04-2017 IPR013096 Cupin 2, conserved barrel CLFO_RS12150 0f74a7e4c09acf62e971d12a38c75795 147 Gene3D G3DSA:2.60.120.10 24 144 1.4E-43 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS12150 0f74a7e4c09acf62e971d12a38c75795 147 SUPERFAMILY SSF51182 5 129 2.12E-26 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS13290 46d0bba4a8c5129b468578bbd6beb4fe 178 Pfam PF04542 Sigma-70 region 2 32 96 8.7E-10 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS13290 46d0bba4a8c5129b468578bbd6beb4fe 178 SUPERFAMILY SSF88946 15 109 2.09E-20 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS13290 46d0bba4a8c5129b468578bbd6beb4fe 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 174 7.1E-27 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS13290 46d0bba4a8c5129b468578bbd6beb4fe 178 Gene3D G3DSA:1.10.1740.10 13 113 4.3E-24 T 25-04-2017 CLFO_RS13290 46d0bba4a8c5129b468578bbd6beb4fe 178 Gene3D G3DSA:1.10.10.10 114 177 1.1E-22 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13290 46d0bba4a8c5129b468578bbd6beb4fe 178 SUPERFAMILY SSF88659 108 175 6.54E-17 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS13290 46d0bba4a8c5129b468578bbd6beb4fe 178 Pfam PF08281 Sigma-70, region 4 119 170 2.0E-15 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS19815 0b942f705d8f1776c89210fd4fb45499 146 Pfam PF00636 Ribonuclease III domain 28 123 2.1E-12 T 25-04-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CLFO_RS19815 0b942f705d8f1776c89210fd4fb45499 146 SMART SM00535 4 143 0.0026 T 25-04-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CLFO_RS19815 0b942f705d8f1776c89210fd4fb45499 146 SUPERFAMILY SSF69065 20 140 2.09E-35 T 25-04-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CLFO_RS19815 0b942f705d8f1776c89210fd4fb45499 146 Gene3D G3DSA:1.10.1520.10 17 144 7.1E-45 T 25-04-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CLFO_RS19815 0b942f705d8f1776c89210fd4fb45499 146 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 18 142 29.32 T 25-04-2017 IPR008226 Mini-ribonuclease 3 family CLFO_RS19815 0b942f705d8f1776c89210fd4fb45499 146 PIRSF PIRSF005520 13 146 1.4E-47 T 25-04-2017 IPR008226 Mini-ribonuclease 3 family CLFO_RS15590 e2d3f113b30924da5bbf9c7a1d11aa9c 421 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 210 419 9.7E-36 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS15590 e2d3f113b30924da5bbf9c7a1d11aa9c 421 SUPERFAMILY SSF58104 91 118 1.96E-61 T 25-04-2017 CLFO_RS15590 e2d3f113b30924da5bbf9c7a1d11aa9c 421 SUPERFAMILY SSF58104 151 420 1.96E-61 T 25-04-2017 CLFO_RS15590 e2d3f113b30924da5bbf9c7a1d11aa9c 421 Gene3D G3DSA:1.10.287.950 160 319 4.9E-39 T 25-04-2017 CLFO_RS15590 e2d3f113b30924da5bbf9c7a1d11aa9c 421 Gene3D G3DSA:1.10.287.950 362 409 4.9E-39 T 25-04-2017 CLFO_RS15590 e2d3f113b30924da5bbf9c7a1d11aa9c 421 Gene3D G3DSA:1.20.120.370 10 91 8.0E-4 T 25-04-2017 IPR027361 Nicotinic acetylcholine-gated receptor, transmembrane domain CLFO_RS15590 e2d3f113b30924da5bbf9c7a1d11aa9c 421 SMART SM00304 368 417 97.0 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS15590 e2d3f113b30924da5bbf9c7a1d11aa9c 421 SMART SM00304 61 116 5.5E-5 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS15590 e2d3f113b30924da5bbf9c7a1d11aa9c 421 Pfam PF00672 HAMP domain 42 113 9.6E-10 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS15590 e2d3f113b30924da5bbf9c7a1d11aa9c 421 SMART SM00283 124 420 9.3E-43 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS01465 c97941257ed2bfff7a5e5f2240086ff7 391 Gene3D G3DSA:3.40.640.10 20 245 1.8E-69 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS01465 c97941257ed2bfff7a5e5f2240086ff7 391 SUPERFAMILY SSF53383 8 371 1.67E-89 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS01465 c97941257ed2bfff7a5e5f2240086ff7 391 PIRSF PIRSF000390 5 375 6.4E-99 T 25-04-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLFO_RS01465 c97941257ed2bfff7a5e5f2240086ff7 391 Gene3D G3DSA:3.90.1150.10 248 374 1.3E-23 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS01465 c97941257ed2bfff7a5e5f2240086ff7 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 22 370 1.4E-96 T 25-04-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLFO_RS06455 2d444a3f662cb629f37d8bd5e0d98b59 392 SMART SM00919 161 385 8.4E-124 T 25-04-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CLFO_RS06455 2d444a3f662cb629f37d8bd5e0d98b59 392 SMART SM01274 16 149 5.0E-90 T 25-04-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLFO_RS06455 2d444a3f662cb629f37d8bd5e0d98b59 392 Gene3D G3DSA:3.40.50.720 159 391 9.7E-79 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS06455 2d444a3f662cb629f37d8bd5e0d98b59 392 Gene3D G3DSA:3.40.50.10380 6 158 6.3E-60 T 25-04-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLFO_RS06455 2d444a3f662cb629f37d8bd5e0d98b59 392 Pfam PF00390 Malic enzyme, N-terminal domain 19 149 8.4E-34 T 25-04-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CLFO_RS06455 2d444a3f662cb629f37d8bd5e0d98b59 392 SUPERFAMILY SSF51735 161 391 7.41E-76 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS06455 2d444a3f662cb629f37d8bd5e0d98b59 392 SUPERFAMILY SSF53223 10 159 3.88E-59 T 25-04-2017 CLFO_RS06455 2d444a3f662cb629f37d8bd5e0d98b59 392 PIRSF PIRSF000106 11 392 8.7E-84 T 25-04-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 CLFO_RS06455 2d444a3f662cb629f37d8bd5e0d98b59 392 Pfam PF03949 Malic enzyme, NAD binding domain 163 384 8.4E-22 T 25-04-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CLFO_RS14175 0efce458b4c0515091c804daabbf4dc4 293 Pfam PF01476 LysM domain 3 46 1.7E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS14175 0efce458b4c0515091c804daabbf4dc4 293 Pfam PF01476 LysM domain 61 103 2.0E-8 T 25-04-2017 IPR018392 LysM domain CLFO_RS14175 0efce458b4c0515091c804daabbf4dc4 293 Gene3D G3DSA:3.10.350.10 60 103 9.0E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS14175 0efce458b4c0515091c804daabbf4dc4 293 SMART SM00257 2 46 6.2E-15 T 25-04-2017 IPR018392 LysM domain CLFO_RS14175 0efce458b4c0515091c804daabbf4dc4 293 SMART SM00257 60 104 2.9E-9 T 25-04-2017 IPR018392 LysM domain CLFO_RS14175 0efce458b4c0515091c804daabbf4dc4 293 SUPERFAMILY SSF48371 134 211 1.67E-7 T 25-04-2017 IPR016024 Armadillo-type fold GO:0005488 CLFO_RS14175 0efce458b4c0515091c804daabbf4dc4 293 SUPERFAMILY SSF54106 60 104 3.27E-8 T 25-04-2017 IPR018392 LysM domain CLFO_RS14175 0efce458b4c0515091c804daabbf4dc4 293 Gene3D G3DSA:3.10.350.10 2 47 5.5E-17 T 25-04-2017 IPR018392 LysM domain CLFO_RS14175 0efce458b4c0515091c804daabbf4dc4 293 Gene3D G3DSA:1.25.10.10 147 207 2.4E-4 T 25-04-2017 IPR011989 Armadillo-like helical CLFO_RS14175 0efce458b4c0515091c804daabbf4dc4 293 SUPERFAMILY SSF54106 2 46 6.41E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS15710 ab3ad4864063a84076f08945f359f8d9 470 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 12 461 1.5E-145 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS15710 ab3ad4864063a84076f08945f359f8d9 470 PIRSF PIRSF005690 2 470 6.1E-145 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS01810 9ec3f37454b26af236b92a22b8897eeb 680 SUPERFAMILY SSF52540 48 281 1.86E-30 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01810 9ec3f37454b26af236b92a22b8897eeb 680 Gene3D G3DSA:1.20.120.20 589 657 4.6E-4 T 25-04-2017 CLFO_RS01810 9ec3f37454b26af236b92a22b8897eeb 680 Gene3D G3DSA:1.20.120.20 432 477 4.6E-4 T 25-04-2017 CLFO_RS01810 9ec3f37454b26af236b92a22b8897eeb 680 Gene3D G3DSA:3.40.50.300 155 280 2.6E-22 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01810 9ec3f37454b26af236b92a22b8897eeb 680 Gene3D G3DSA:3.40.50.300 56 104 2.6E-22 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01810 9ec3f37454b26af236b92a22b8897eeb 680 Pfam PF00350 Dynamin family 61 220 5.2E-30 T 25-04-2017 IPR022812 Dynamin superfamily CLFO_RS15215 9389a261fcba20ea862c154e740fba06 314 Gene3D G3DSA:3.40.50.300 6 236 2.4E-72 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15215 9389a261fcba20ea862c154e740fba06 314 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15215 9389a261fcba20ea862c154e740fba06 314 Pfam PF00005 ABC transporter 20 162 2.4E-29 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15215 9389a261fcba20ea862c154e740fba06 314 Pfam PF13732 Domain of unknown function (DUF4162) 216 303 1.1E-6 T 25-04-2017 IPR025302 Domain of unknown function DUF4162 CLFO_RS15215 9389a261fcba20ea862c154e740fba06 314 SUPERFAMILY SSF52540 5 227 7.61E-64 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15215 9389a261fcba20ea862c154e740fba06 314 SMART SM00382 28 211 1.6E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 SUPERFAMILY SSF52540 5 276 3.33E-85 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 TIGRFAM TIGR00484 EF-G: translation elongation factor G 7 685 1.5E-222 T 25-04-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 Pfam PF00009 Elongation factor Tu GTP binding domain 8 275 2.0E-45 T 25-04-2017 CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 SUPERFAMILY SSF50447 259 394 1.87E-30 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 Gene3D G3DSA:3.40.50.300 5 281 2.8E-84 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 SMART SM00889 474 590 1.9E-66 T 25-04-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 Pfam PF03144 Elongation factor Tu domain 2 318 385 2.7E-10 T 25-04-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 SMART SM00838 592 680 8.7E-42 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 Gene3D G3DSA:3.30.70.240 591 678 3.0E-31 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 Gene3D G3DSA:3.30.70.870 399 473 1.6E-27 T 25-04-2017 CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 Gene3D G3DSA:2.40.30.10 302 398 1.0E-30 T 25-04-2017 CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 SUPERFAMILY SSF54980 399 476 1.47E-20 T 25-04-2017 IPR009022 Elongation factor G, III-V domain CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 Pfam PF14492 Elongation Factor G, domain II 400 471 2.9E-26 T 25-04-2017 IPR009022 Elongation factor G, III-V domain CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 Pfam PF03764 Elongation factor G, domain IV 474 590 2.2E-41 T 25-04-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 178 2.2E-20 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 Pfam PF00679 Elongation factor G C-terminus 592 678 3.9E-29 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 SUPERFAMILY SSF54980 595 683 2.39E-28 T 25-04-2017 IPR009022 Elongation factor G, III-V domain CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 PRINTS PR00315 GTP-binding elongation factor signature 129 138 3.1E-7 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 PRINTS PR00315 GTP-binding elongation factor signature 11 24 3.1E-7 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 PRINTS PR00315 GTP-binding elongation factor signature 57 65 3.1E-7 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 PRINTS PR00315 GTP-binding elongation factor signature 77 87 3.1E-7 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 Gene3D G3DSA:3.30.230.10 478 590 4.4E-47 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS19900 773ae1363c439f2ecd7704951476c3d3 689 SUPERFAMILY SSF54211 476 591 5.82E-42 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS17545 9f6b14be787c5a2773949ef0f2e25778 205 SUPERFAMILY SSF101262 1 203 6.8E-62 T 25-04-2017 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 CLFO_RS17545 9f6b14be787c5a2773949ef0f2e25778 205 Pfam PF04961 Formiminotransferase-cyclodeaminase 6 185 4.7E-66 T 25-04-2017 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 CLFO_RS06530 0e1403fa26797c0738d3ea3c8e0dee22 104 Pfam PF13237 4Fe-4S dicluster domain 3 51 9.0E-9 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS06530 0e1403fa26797c0738d3ea3c8e0dee22 104 SUPERFAMILY SSF54862 3 61 2.46E-15 T 25-04-2017 CLFO_RS06530 0e1403fa26797c0738d3ea3c8e0dee22 104 Gene3D G3DSA:3.30.70.20 1 58 3.4E-15 T 25-04-2017 CLFO_RS06565 8960a3869d47adffc81eb01fced7caa2 289 SMART SM00342 200 283 2.4E-27 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS06565 8960a3869d47adffc81eb01fced7caa2 289 Gene3D G3DSA:1.10.10.60 182 236 6.0E-13 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS06565 8960a3869d47adffc81eb01fced7caa2 289 SUPERFAMILY SSF46689 237 284 9.41E-13 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS06565 8960a3869d47adffc81eb01fced7caa2 289 Gene3D G3DSA:1.10.10.60 237 284 4.5E-17 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS06565 8960a3869d47adffc81eb01fced7caa2 289 Gene3D G3DSA:2.60.120.280 38 167 3.0E-7 T 25-04-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLFO_RS06565 8960a3869d47adffc81eb01fced7caa2 289 Pfam PF12833 Helix-turn-helix domain 208 284 1.0E-20 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS06565 8960a3869d47adffc81eb01fced7caa2 289 SUPERFAMILY SSF46689 185 234 6.87E-8 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS06565 8960a3869d47adffc81eb01fced7caa2 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 283 2.1E-7 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS06565 8960a3869d47adffc81eb01fced7caa2 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 267 2.1E-7 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS06565 8960a3869d47adffc81eb01fced7caa2 289 SUPERFAMILY SSF51215 39 160 5.75E-9 T 25-04-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLFO_RS06565 8960a3869d47adffc81eb01fced7caa2 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 279 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 PIRSF PIRSF037472 1 793 0.0 T 25-04-2017 IPR017215 5-methyltetrahydrofolate-homocysteine S-methyltransferase, bacterial CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 SUPERFAMILY SSF52242 656 792 2.75E-40 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 SMART SM01018 586 669 4.4E-18 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 Gene3D G3DSA:3.20.20.330 2 319 1.3E-106 T 25-04-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 Pfam PF00809 Pterin binding enzyme 316 536 2.0E-28 T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 SUPERFAMILY SSF82282 2 354 7.72E-113 T 25-04-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 Pfam PF02310 B12 binding domain 675 780 2.0E-26 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 Gene3D G3DSA:3.40.50.280 661 793 1.2E-45 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 Pfam PF02607 B12 binding domain 591 662 4.3E-13 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 SUPERFAMILY SSF51717 313 569 5.23E-73 T 25-04-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 SUPERFAMILY SSF47644 585 668 3.14E-16 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 Gene3D G3DSA:3.20.20.20 320 565 9.0E-80 T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 Pfam PF02574 Homocysteine S-methyltransferase 8 279 6.2E-74 T 25-04-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CLFO_RS03660 efeea266cc6046a5e4b6c319f506aab2 795 Gene3D G3DSA:1.10.1240.10 582 660 9.6E-16 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1251 1437 3.0E-49 T 25-04-2017 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 SUPERFAMILY SSF53901 137 510 1.69E-92 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 SUPERFAMILY SSF53901 552 572 1.69E-92 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 SUPERFAMILY SSF53901 2066 2085 6.57E-77 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 SUPERFAMILY SSF53901 1655 2021 6.57E-77 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 SMART SM00823 Phosphopantetheine attachment site 1530 1597 8.1E-8 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 299 315 - T 25-04-2017 IPR018201 Beta-ketoacyl synthase, active site CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 SMART SM00825 Beta-ketoacyl synthase 1658 2090 1.6E-164 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 SMART SM00825 Beta-ketoacyl synthase 140 576 5.9E-201 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 SUPERFAMILY SSF51735 1247 1475 5.67E-38 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 SMART SM00826 769 937 1.7E-18 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 SUPERFAMILY SSF47336 1528 1598 1.07E-12 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Pfam PF00550 Phosphopantetheine attachment site 32 88 2.5E-4 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Pfam PF00550 Phosphopantetheine attachment site 1529 1592 3.1E-12 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Gene3D G3DSA:3.40.47.10 399 575 6.6E-55 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Gene3D G3DSA:3.40.47.10 1917 2089 3.4E-46 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Gene3D G3DSA:3.40.47.10 145 398 3.8E-99 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 394 517 2.7E-35 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1911 2027 6.1E-35 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Gene3D G3DSA:3.40.47.10 1664 1915 6.0E-82 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Gene3D G3DSA:1.10.1200.10 1530 1614 1.3E-14 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Gene3D G3DSA:1.10.1200.10 22 144 2.5E-9 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Gene3D G3DSA:1.10.1200.10 1654 1663 1.3E-14 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Gene3D G3DSA:3.40.50.720 1249 1472 3.5E-52 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1657 1901 1.0E-79 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 138 386 1.3E-90 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 SUPERFAMILY SSF47336 22 152 3.01E-9 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 521 626 1.5E-13 T 25-04-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Pfam PF14765 Polyketide synthase dehydratase 769 1060 2.5E-60 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1553 1568 - T 25-04-2017 IPR006162 Phosphopantetheine attachment site CLFO_RS04765 1add216cada7d1080d21c63b6513630b 2115 Pfam PF08659 KR domain 1251 1436 5.2E-59 T 25-04-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1063 13.297 T 25-04-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 12.725 T 25-04-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Gene3D G3DSA:3.40.50.1380 936 1053 1.6E-23 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Gene3D G3DSA:3.40.50.20 4 108 2.9E-42 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.9E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.9E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.9E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.9E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.9E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.9E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.9E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 1050 0.0 T 25-04-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Gene3D G3DSA:3.40.50.20 537 660 1.1E-57 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Gene3D G3DSA:3.30.1490.20 142 203 3.4E-20 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 SUPERFAMILY SSF52440 555 673 4.17E-49 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 SUPERFAMILY SSF52440 2 127 2.73E-48 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 SMART SM01096 425 545 5.0E-64 T 25-04-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 835 842 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Gene3D G3DSA:3.30.1490.20 684 746 5.0E-18 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 SUPERFAMILY SSF48108 395 551 2.35E-49 T 25-04-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 545 6.5E-45 T 25-04-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 SUPERFAMILY SSF56059 671 932 1.47E-90 T 25-04-2017 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 SUPERFAMILY SSF56059 128 399 2.12E-108 T 25-04-2017 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Pfam PF02142 MGS-like domain 956 1038 8.0E-10 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 SUPERFAMILY SSF52335 934 1056 1.57E-23 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 671 872 6.5E-34 T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 9.2E-80 T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 SMART SM00851 954 1038 3.1E-10 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Gene3D G3DSA:1.10.1030.10 399 536 5.9E-52 T 25-04-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Gene3D G3DSA:3.30.470.20 747 933 6.9E-65 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS03945 9f1567a59de60f2d3c9f1b7fae279ab7 1064 Gene3D G3DSA:3.30.470.20 204 398 5.3E-77 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS01385 7bed7a5bf70ffd3ba10106ad161eb13f 1036 Gene3D G3DSA:3.90.550.10 800 1025 6.1E-68 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS01385 7bed7a5bf70ffd3ba10106ad161eb13f 1036 Pfam PF01973 Protein of unknown function DUF115 211 388 5.4E-37 T 25-04-2017 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CLFO_RS01385 7bed7a5bf70ffd3ba10106ad161eb13f 1036 Pfam PF00571 CBS domain 687 732 1.8E-4 T 25-04-2017 IPR000644 CBS domain CLFO_RS01385 7bed7a5bf70ffd3ba10106ad161eb13f 1036 Gene3D G3DSA:3.10.580.10 684 793 9.7E-18 T 25-04-2017 CLFO_RS01385 7bed7a5bf70ffd3ba10106ad161eb13f 1036 Pfam PF00483 Nucleotidyl transferase 801 1024 2.3E-46 T 25-04-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLFO_RS01385 7bed7a5bf70ffd3ba10106ad161eb13f 1036 SUPERFAMILY SSF53448 726 1026 2.09E-67 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS19545 9228671217b3051b473b920bdcf2ba15 287 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 278 1.2E-124 T 25-04-2017 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 CLFO_RS19545 9228671217b3051b473b920bdcf2ba15 287 Gene3D G3DSA:3.40.50.300 2 238 4.2E-73 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19545 9228671217b3051b473b920bdcf2ba15 287 Pfam PF00005 ABC transporter 23 173 3.4E-33 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS19545 9228671217b3051b473b920bdcf2ba15 287 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS19545 9228671217b3051b473b920bdcf2ba15 287 SMART SM00382 32 222 2.7E-16 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS19545 9228671217b3051b473b920bdcf2ba15 287 SUPERFAMILY SSF52540 3 238 3.97E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02790 ea0450737090e8063c9df56850af877f 394 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 9 393 6.2E-95 T 25-04-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CLFO_RS02790 ea0450737090e8063c9df56850af877f 394 Gene3D G3DSA:3.30.930.10 6 207 8.0E-83 T 25-04-2017 CLFO_RS02790 ea0450737090e8063c9df56850af877f 394 Gene3D G3DSA:3.30.930.10 244 330 8.0E-83 T 25-04-2017 CLFO_RS02790 ea0450737090e8063c9df56850af877f 394 SUPERFAMILY SSF55681 10 329 2.11E-68 T 25-04-2017 CLFO_RS02790 ea0450737090e8063c9df56850af877f 394 PIRSF PIRSF001549 3 394 3.6E-102 T 25-04-2017 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CLFO_RS02790 ea0450737090e8063c9df56850af877f 394 Pfam PF13393 Histidyl-tRNA synthetase 12 321 2.0E-42 T 25-04-2017 CLFO_RS20680 960b11395706ec4b385c32f230c501dd 318 SUPERFAMILY SSF53850 26 314 2.66E-34 T 25-04-2017 CLFO_RS20680 960b11395706ec4b385c32f230c501dd 318 Pfam PF02621 Menaquinone biosynthesis 59 283 3.6E-9 T 25-04-2017 IPR003773 Menaquinone biosynthesis enzyme CLFO_RS20680 960b11395706ec4b385c32f230c501dd 318 PIRSF PIRSF027386 1 318 3.3E-100 T 25-04-2017 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type CLFO_RS20680 960b11395706ec4b385c32f230c501dd 318 Gene3D G3DSA:3.40.190.10 107 237 3.4E-16 T 25-04-2017 CLFO_RS11715 04a41eabdad373ae31fd934af6f302e3 265 Pfam PF03799 Cell division protein FtsQ 126 249 4.6E-6 T 25-04-2017 IPR005548 Cell division protein FtsQ/DivIB CLFO_RS11715 04a41eabdad373ae31fd934af6f302e3 265 Pfam PF08478 POTRA domain, FtsQ-type 49 116 1.9E-14 T 25-04-2017 IPR013685 Polypeptide-transport-associated, FtsQ-type CLFO_RS08650 0da03a48f3d163f72eac1e47c75bde48 249 Pfam PF13730 Helix-turn-helix domain 15 62 3.9E-6 T 25-04-2017 CLFO_RS20245 980a086f4ccbf0e7a0320a1a641d14bf 223 Pfam PF13483 Beta-lactamase superfamily domain 2 189 7.2E-26 T 25-04-2017 CLFO_RS20245 980a086f4ccbf0e7a0320a1a641d14bf 223 SMART SM00849 7 189 2.8E-9 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS20245 980a086f4ccbf0e7a0320a1a641d14bf 223 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 223 35.529 T 25-04-2017 IPR022877 Protein of unknown funcion UPF0173 CLFO_RS20245 980a086f4ccbf0e7a0320a1a641d14bf 223 Gene3D G3DSA:3.60.15.10 1 222 4.5E-53 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS20245 980a086f4ccbf0e7a0320a1a641d14bf 223 SUPERFAMILY SSF56281 1 203 1.02E-33 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS12215 44e7d0cbfd3579fdb82de0d58ab71838 115 Gene3D G3DSA:3.90.780.10 5 113 4.6E-24 T 25-04-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 CLFO_RS12215 44e7d0cbfd3579fdb82de0d58ab71838 115 SUPERFAMILY SSF55816 5 113 1.57E-25 T 25-04-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 CLFO_RS12215 44e7d0cbfd3579fdb82de0d58ab71838 115 Pfam PF02872 5'-nucleotidase, C-terminal domain 5 93 9.8E-18 T 25-04-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 CLFO_RS07640 754f72df451a908c3cd2ab3bbdd4c297 359 SUPERFAMILY SSF52980 150 246 7.51E-5 T 25-04-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLFO_RS07640 754f72df451a908c3cd2ab3bbdd4c297 359 Pfam PF05626 Protein of unknown function (DUF790) 141 229 2.7E-9 T 25-04-2017 IPR008508 Protein of unknown function DUF790, endonuclease-like CLFO_RS07640 754f72df451a908c3cd2ab3bbdd4c297 359 Gene3D G3DSA:3.40.91.30 145 237 1.6E-14 T 25-04-2017 IPR011578 Restriction endonuclease, FokI, C-terminal/endonuclease I, core GO:0003677|GO:0004536 CLFO_RS07640 754f72df451a908c3cd2ab3bbdd4c297 359 SMART SM00910 252 351 3.4E-13 T 25-04-2017 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 CLFO_RS07640 754f72df451a908c3cd2ab3bbdd4c297 359 Pfam PF08797 HIRAN domain 254 329 1.1E-12 T 25-04-2017 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 CLFO_RS12760 d34e9703f8bcf4caecc6ac4550dbfe42 189 SMART SM01012 130 185 2.4E-20 T 25-04-2017 IPR005561 ANTAR domain GO:0003723 CLFO_RS12760 d34e9703f8bcf4caecc6ac4550dbfe42 189 Gene3D G3DSA:1.10.10.10 132 188 1.7E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12760 d34e9703f8bcf4caecc6ac4550dbfe42 189 Pfam PF00072 Response regulator receiver domain 6 115 1.3E-8 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS12760 d34e9703f8bcf4caecc6ac4550dbfe42 189 Pfam PF03861 ANTAR domain 132 185 1.8E-17 T 25-04-2017 IPR005561 ANTAR domain GO:0003723 CLFO_RS12760 d34e9703f8bcf4caecc6ac4550dbfe42 189 SUPERFAMILY SSF52172 1 185 1.99E-37 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS12760 d34e9703f8bcf4caecc6ac4550dbfe42 189 SMART SM00448 4 114 3.2E-5 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS12760 d34e9703f8bcf4caecc6ac4550dbfe42 189 PIRSF PIRSF036382 1 189 8.8E-43 T 25-04-2017 IPR008327 Signal transduction response regulator, antiterminator CLFO_RS12760 d34e9703f8bcf4caecc6ac4550dbfe42 189 Gene3D G3DSA:3.40.50.2300 2 130 1.3E-14 T 25-04-2017 CLFO_RS18600 30bf65836f21a85f078828bf4d42acb9 361 Pfam PF00266 Aminotransferase class-V 4 348 3.3E-54 T 25-04-2017 IPR000192 Aminotransferase class V domain CLFO_RS18600 30bf65836f21a85f078828bf4d42acb9 361 SUPERFAMILY SSF53383 1 358 1.72E-116 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS18600 30bf65836f21a85f078828bf4d42acb9 361 Gene3D G3DSA:3.40.640.10 17 256 2.8E-107 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS18600 30bf65836f21a85f078828bf4d42acb9 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 50.836 T 25-04-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CLFO_RS18600 30bf65836f21a85f078828bf4d42acb9 361 PIRSF PIRSF000525 1 360 2.0E-156 T 25-04-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CLFO_RS18600 30bf65836f21a85f078828bf4d42acb9 361 Gene3D G3DSA:3.90.1150.10 258 359 4.1E-43 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS18600 30bf65836f21a85f078828bf4d42acb9 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 4.9E-160 T 25-04-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 Pfam PF00581 Rhodanese-like domain 461 545 3.4E-12 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 Gene3D G3DSA:3.50.50.60 1 111 2.4E-19 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 Gene3D G3DSA:3.50.50.60 112 318 1.1E-54 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 332 434 9.9E-12 T 25-04-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.1E-22 T 25-04-2017 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 2.1E-22 T 25-04-2017 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 2.1E-22 T 25-04-2017 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.1E-22 T 25-04-2017 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 2.1E-22 T 25-04-2017 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 SMART SM00450 456 549 2.7E-19 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 Gene3D G3DSA:3.30.390.30 339 441 2.1E-39 T 25-04-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 1.5E-14 T 25-04-2017 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 1.5E-14 T 25-04-2017 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.5E-14 T 25-04-2017 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 1.5E-14 T 25-04-2017 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 Gene3D G3DSA:3.40.250.10 442 544 6.8E-26 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 309 2.0E-61 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 SUPERFAMILY SSF55424 325 447 9.11E-30 T 25-04-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 SUPERFAMILY SSF51905 1 320 2.13E-42 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS04480 6618b69eac72c41a15d2d35b289cf98e 570 SUPERFAMILY SSF52821 436 545 5.24E-28 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 ProSitePatterns PS01155 Endonuclease III family signature. 114 141 - T 25-04-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 SUPERFAMILY SSF48150 18 234 3.45E-77 T 25-04-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 Gene3D G3DSA:1.10.1670.10 135 237 2.5E-41 T 25-04-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 Pfam PF14815 NUDIX domain 248 359 1.0E-20 T 25-04-2017 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 Gene3D G3DSA:1.10.340.30 34 134 1.4E-47 T 25-04-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 47 179 1.1E-24 T 25-04-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 SMART SM00478 51 202 5.8E-55 T 25-04-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 Gene3D G3DSA:3.90.79.10 247 359 1.9E-26 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 SMART SM00525 203 223 0.0013 T 25-04-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 SUPERFAMILY SSF55811 232 359 2.44E-24 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 20 283 9.6E-102 T 25-04-2017 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 Pfam PF00633 Helix-hairpin-helix motif 111 140 4.6E-9 T 25-04-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CLFO_RS18265 e005416ac28461fce177d8c88251d512 362 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 204 220 - T 25-04-2017 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CLFO_RS02910 f43bf06fc6dfb7db0cf63308d34a2750 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 221 1.3E-17 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS02910 f43bf06fc6dfb7db0cf63308d34a2750 221 SUPERFAMILY SSF161098 13 209 1.96E-39 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS02910 f43bf06fc6dfb7db0cf63308d34a2750 221 Gene3D G3DSA:1.10.3720.10 12 220 4.2E-33 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS18025 7aa4b2283b5f96b109cac65338ba5967 192 SUPERFAMILY SSF53271 4 148 1.22E-39 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS18025 7aa4b2283b5f96b109cac65338ba5967 192 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 7 190 2.5E-62 T 25-04-2017 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686 CLFO_RS18025 7aa4b2283b5f96b109cac65338ba5967 192 Gene3D G3DSA:3.40.50.2020 3 186 8.1E-50 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS18025 7aa4b2283b5f96b109cac65338ba5967 192 Pfam PF00156 Phosphoribosyl transferase domain 40 150 2.7E-19 T 25-04-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLFO_RS18025 7aa4b2283b5f96b109cac65338ba5967 192 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 192 26.086 T 25-04-2017 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CLFO_RS15975 0d23c33715eb7ab8d9119a8594a68358 221 SUPERFAMILY SSF52499 36 194 3.92E-30 T 25-04-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CLFO_RS15975 0d23c33715eb7ab8d9119a8594a68358 221 Gene3D G3DSA:3.40.50.850 42 197 2.3E-28 T 25-04-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CLFO_RS15975 0d23c33715eb7ab8d9119a8594a68358 221 Pfam PF00857 Isochorismatase family 47 198 2.3E-23 T 25-04-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CLFO_RS19385 7daa1ec1a4f8c4021ee3d8eca9a855a1 397 Gene3D G3DSA:3.40.630.10 302 394 7.0E-101 T 25-04-2017 CLFO_RS19385 7daa1ec1a4f8c4021ee3d8eca9a855a1 397 Gene3D G3DSA:3.40.630.10 3 182 7.0E-101 T 25-04-2017 CLFO_RS19385 7daa1ec1a4f8c4021ee3d8eca9a855a1 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 380 6.5E-116 T 25-04-2017 IPR017439 Amidohydrolase GO:0016787 CLFO_RS19385 7daa1ec1a4f8c4021ee3d8eca9a855a1 397 SUPERFAMILY SSF55031 187 291 4.45E-29 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS19385 7daa1ec1a4f8c4021ee3d8eca9a855a1 397 PIRSF PIRSF005962 1 396 2.5E-136 T 25-04-2017 IPR017439 Amidohydrolase GO:0016787 CLFO_RS19385 7daa1ec1a4f8c4021ee3d8eca9a855a1 397 SUPERFAMILY SSF53187 5 201 2.38E-82 T 25-04-2017 CLFO_RS19385 7daa1ec1a4f8c4021ee3d8eca9a855a1 397 SUPERFAMILY SSF53187 302 392 2.38E-82 T 25-04-2017 CLFO_RS19385 7daa1ec1a4f8c4021ee3d8eca9a855a1 397 Pfam PF07687 Peptidase dimerisation domain 189 283 1.1E-13 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS19385 7daa1ec1a4f8c4021ee3d8eca9a855a1 397 Gene3D G3DSA:3.30.70.360 185 301 9.4E-37 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS19385 7daa1ec1a4f8c4021ee3d8eca9a855a1 397 Pfam PF01546 Peptidase family M20/M25/M40 75 374 1.1E-31 T 25-04-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLFO_RS04100 3d7421ddab9f9addb32b0cd40ed65a47 486 Pfam PF15975 Flotillin 326 443 3.7E-7 T 25-04-2017 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 CLFO_RS04100 3d7421ddab9f9addb32b0cd40ed65a47 486 SMART SM00244 26 199 1.4E-4 T 25-04-2017 IPR001107 Band 7 domain CLFO_RS04100 3d7421ddab9f9addb32b0cd40ed65a47 486 Pfam PF01145 SPFH domain / Band 7 family 32 215 4.9E-21 T 25-04-2017 IPR001107 Band 7 domain CLFO_RS04100 3d7421ddab9f9addb32b0cd40ed65a47 486 SUPERFAMILY SSF117892 64 203 9.42E-33 T 25-04-2017 IPR001107 Band 7 domain CLFO_RS02920 b717785bce55cee31f804853bfde4121 391 Pfam PF00155 Aminotransferase class I and II 29 378 4.1E-70 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS02920 b717785bce55cee31f804853bfde4121 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 229 242 - T 25-04-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CLFO_RS02920 b717785bce55cee31f804853bfde4121 391 Gene3D G3DSA:3.40.640.10 40 251 5.7E-78 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS02920 b717785bce55cee31f804853bfde4121 391 Gene3D G3DSA:3.90.1150.10 252 382 2.6E-33 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS02920 b717785bce55cee31f804853bfde4121 391 SUPERFAMILY SSF53383 1 383 2.37E-117 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS09960 18b2aed82b87fbc84cc7d7ee1d0d082a 315 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 23 304 3.0E-71 T 25-04-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLFO_RS09960 18b2aed82b87fbc84cc7d7ee1d0d082a 315 Pfam PF03812 2-keto-3-deoxygluconate permease 3 304 3.4E-117 T 25-04-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLFO_RS09960 18b2aed82b87fbc84cc7d7ee1d0d082a 315 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 311 32.047 T 25-04-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLFO_RS05065 d86d6dd574760d308f855a79d29c41a1 637 PIRSF PIRSF005023 1 631 5.4E-235 T 25-04-2017 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS05065 d86d6dd574760d308f855a79d29c41a1 637 Gene3D G3DSA:3.40.50.2030 237 404 1.1E-73 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05065 d86d6dd574760d308f855a79d29c41a1 637 SUPERFAMILY SSF56821 2 630 7.85E-188 T 25-04-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLFO_RS05065 d86d6dd574760d308f855a79d29c41a1 637 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 8 630 9.7E-207 T 25-04-2017 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS05065 d86d6dd574760d308f855a79d29c41a1 637 Gene3D G3DSA:3.40.50.2030 405 630 1.1E-88 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05065 d86d6dd574760d308f855a79d29c41a1 637 Gene3D G3DSA:1.20.1270.30 64 235 4.7E-70 T 25-04-2017 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS05065 d86d6dd574760d308f855a79d29c41a1 637 Pfam PF03063 Prismane/CO dehydrogenase family 46 610 2.2E-170 T 25-04-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS16700 fa94a44eedf8abbc26633ed016d23b9e 153 Pfam PF02502 Ribose/Galactose Isomerase 3 140 3.3E-50 T 25-04-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLFO_RS16700 fa94a44eedf8abbc26633ed016d23b9e 153 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 146 1.0E-44 T 25-04-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLFO_RS16700 fa94a44eedf8abbc26633ed016d23b9e 153 PIRSF PIRSF005384 1 147 5.0E-52 T 25-04-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLFO_RS16700 fa94a44eedf8abbc26633ed016d23b9e 153 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 141 3.3E-45 T 25-04-2017 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 CLFO_RS16700 fa94a44eedf8abbc26633ed016d23b9e 153 Gene3D G3DSA:3.40.1400.10 1 151 6.5E-58 T 25-04-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLFO_RS16700 fa94a44eedf8abbc26633ed016d23b9e 153 SUPERFAMILY SSF89623 1 144 3.53E-54 T 25-04-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CLFO_RS19975 6ce1d384d181b50ec2e015dccb8cde87 322 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 5.0E-126 T 25-04-2017 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CLFO_RS19975 6ce1d384d181b50ec2e015dccb8cde87 322 Gene3D G3DSA:1.10.1200.80 251 317 7.7E-27 T 25-04-2017 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CLFO_RS19975 6ce1d384d181b50ec2e015dccb8cde87 322 Pfam PF01207 Dihydrouridine synthase (Dus) 14 311 1.9E-102 T 25-04-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLFO_RS19975 6ce1d384d181b50ec2e015dccb8cde87 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 25-04-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLFO_RS19975 6ce1d384d181b50ec2e015dccb8cde87 322 SUPERFAMILY SSF51395 10 317 2.97E-90 T 25-04-2017 CLFO_RS19975 6ce1d384d181b50ec2e015dccb8cde87 322 PIRSF PIRSF006621 1 321 1.3E-109 T 25-04-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CLFO_RS19975 6ce1d384d181b50ec2e015dccb8cde87 322 Gene3D G3DSA:3.20.20.70 7 243 2.3E-87 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 Pfam PF00158 Sigma-54 interaction domain 311 478 1.6E-67 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 SMART SM00382 331 475 8.7E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 Pfam PF02954 Bacterial regulatory protein, Fis family 576 616 3.1E-6 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 Gene3D G3DSA:3.30.450.20 7 68 1.3E-6 T 25-04-2017 CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 Gene3D G3DSA:3.30.450.20 230 286 1.3E-6 T 25-04-2017 CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 Gene3D G3DSA:1.10.8.60 485 558 2.8E-21 T 25-04-2017 CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 Gene3D G3DSA:3.40.50.300 308 484 2.5E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 398 413 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 335 348 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 525 534 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 Gene3D G3DSA:1.10.10.60 568 618 2.2E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 SUPERFAMILY SSF52540 310 553 2.87E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19415 cd7155765ede31320d08fc0500e349a0 619 SUPERFAMILY SSF46689 523 619 8.96E-10 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 SUPERFAMILY SSF47384 239 309 1.12E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 307 3.0E-11 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.2E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.2E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 1.2E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 1.2E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 SMART SM00387 352 458 2.5E-32 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 SMART SM00388 246 311 1.2E-10 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 456 7.0E-19 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 SUPERFAMILY SSF55874 301 456 3.8E-37 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 Gene3D G3DSA:1.10.287.130 242 296 3.3E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 Gene3D G3DSA:3.30.565.10 297 457 1.9E-39 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 Gene3D G3DSA:3.30.450.20 124 227 1.3E-11 T 25-04-2017 CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 235 1.1E-6 T 25-04-2017 IPR000014 PAS domain CLFO_RS17720 e1f6a54d9433002753f8737fd3dfa9c5 458 SUPERFAMILY SSF55785 119 225 4.0E-8 T 25-04-2017 IPR000014 PAS domain CLFO_RS04895 9e2eafe3fd90228d4a60a8308bf3d19f 225 Pfam PF00005 ABC transporter 20 165 6.0E-30 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS04895 9e2eafe3fd90228d4a60a8308bf3d19f 225 SMART SM00382 29 214 8.9E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04895 9e2eafe3fd90228d4a60a8308bf3d19f 225 Gene3D G3DSA:3.40.50.300 4 219 1.8E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04895 9e2eafe3fd90228d4a60a8308bf3d19f 225 SUPERFAMILY SSF52540 4 216 2.87E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04895 9e2eafe3fd90228d4a60a8308bf3d19f 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 Gene3D G3DSA:3.30.565.10 348 519 9.2E-46 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 472 4.3E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 4.3E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 458 4.3E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 4.3E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 SMART SM00387 408 521 2.7E-35 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 SUPERFAMILY SSF55874 351 522 1.83E-44 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 Gene3D G3DSA:3.30.450.20 102 164 5.7E-4 T 25-04-2017 CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 SUPERFAMILY SSF47384 281 363 3.34E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 Gene3D G3DSA:1.10.287.130 288 347 7.0E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 408 519 1.9E-25 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 SMART SM00388 295 362 3.0E-21 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15380 68af776dccddaeb29bd8af6b948d1d52 534 Pfam PF00512 His Kinase A (phospho-acceptor) domain 296 362 1.2E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS11285 ec419a38b1d44a43a30ea1d22da2e69f 332 Gene3D G3DSA:3.40.47.10 165 329 3.6E-59 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS11285 ec419a38b1d44a43a30ea1d22da2e69f 332 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 188 1.2E-33 T 25-04-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLFO_RS11285 ec419a38b1d44a43a30ea1d22da2e69f 332 Gene3D G3DSA:3.40.47.10 6 164 4.2E-68 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS11285 ec419a38b1d44a43a30ea1d22da2e69f 332 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 240 329 1.0E-38 T 25-04-2017 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLFO_RS11285 ec419a38b1d44a43a30ea1d22da2e69f 332 SUPERFAMILY SSF53901 7 330 1.84E-74 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS11285 ec419a38b1d44a43a30ea1d22da2e69f 332 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 329 74.697 T 25-04-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLFO_RS11285 ec419a38b1d44a43a30ea1d22da2e69f 332 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 7 329 3.8E-134 T 25-04-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 Pfam PF00989 PAS fold 196 248 1.2E-6 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 Gene3D G3DSA:3.40.50.10660 76 166 2.4E-9 T 25-04-2017 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 SUPERFAMILY SSF46689 536 627 3.45E-8 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 Gene3D G3DSA:3.40.50.300 319 495 1.5E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 Pfam PF00158 Sigma-54 interaction domain 322 489 2.1E-68 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 Pfam PF02954 Bacterial regulatory protein, Fis family 591 626 2.5E-7 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 Gene3D G3DSA:1.10.8.60 496 570 1.3E-15 T 25-04-2017 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 SUPERFAMILY SSF159800 3 186 5.89E-36 T 25-04-2017 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 Pfam PF06506 Propionate catabolism activator 25 189 5.7E-38 T 25-04-2017 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 SUPERFAMILY SSF52540 321 567 1.04E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 SUPERFAMILY SSF55785 196 256 1.79E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 SMART SM00382 342 486 4.5E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 409 424 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 Gene3D G3DSA:3.40.50.2300 4 75 2.7E-11 T 25-04-2017 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 Gene3D G3DSA:3.40.50.2300 168 193 2.7E-11 T 25-04-2017 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 346 359 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 Gene3D G3DSA:1.10.10.60 587 626 7.8E-9 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS20545 9838b08d2b642efa1840746e3b4fda75 635 Gene3D G3DSA:3.30.450.20 194 306 6.9E-14 T 25-04-2017 CLFO_RS14015 d17c536b52d3e26d4f47dffb62f24af1 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 2.2E-7 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS14015 d17c536b52d3e26d4f47dffb62f24af1 224 Gene3D G3DSA:1.10.357.10 6 118 3.3E-17 T 25-04-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLFO_RS14015 d17c536b52d3e26d4f47dffb62f24af1 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.4E-6 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS14015 d17c536b52d3e26d4f47dffb62f24af1 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.4E-6 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS14015 d17c536b52d3e26d4f47dffb62f24af1 224 SUPERFAMILY SSF46689 4 78 5.64E-13 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS15580 ecc18109d9cfd69fc57fbb6d1fd59d06 347 SUPERFAMILY SSF58104 153 344 1.57E-41 T 25-04-2017 CLFO_RS15580 ecc18109d9cfd69fc57fbb6d1fd59d06 347 Pfam PF10114 Sensory domain found in PocR 19 179 2.8E-57 T 25-04-2017 IPR018771 PocR domain CLFO_RS15580 ecc18109d9cfd69fc57fbb6d1fd59d06 347 SMART SM00283 146 346 3.4E-4 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS15580 ecc18109d9cfd69fc57fbb6d1fd59d06 347 Gene3D G3DSA:1.10.287.950 161 343 2.4E-37 T 25-04-2017 CLFO_RS15580 ecc18109d9cfd69fc57fbb6d1fd59d06 347 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 220 342 2.2E-28 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS07020 6e3594760132c39524ef3a441d21e1c3 594 SUPERFAMILY SSF58104 259 290 5.67E-54 T 25-04-2017 CLFO_RS07020 6e3594760132c39524ef3a441d21e1c3 594 SUPERFAMILY SSF58104 323 593 5.67E-54 T 25-04-2017 CLFO_RS07020 6e3594760132c39524ef3a441d21e1c3 594 Gene3D G3DSA:3.30.450.20 38 192 2.3E-44 T 25-04-2017 CLFO_RS07020 6e3594760132c39524ef3a441d21e1c3 594 Pfam PF00672 HAMP domain 216 283 2.0E-7 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS07020 6e3594760132c39524ef3a441d21e1c3 594 Gene3D G3DSA:1.10.287.950 267 347 2.3E-8 T 25-04-2017 CLFO_RS07020 6e3594760132c39524ef3a441d21e1c3 594 Gene3D G3DSA:1.10.287.950 348 546 1.2E-42 T 25-04-2017 CLFO_RS07020 6e3594760132c39524ef3a441d21e1c3 594 SMART SM01049 43 137 4.1E-32 T 25-04-2017 IPR033480 Single Cache domain 2 CLFO_RS07020 6e3594760132c39524ef3a441d21e1c3 594 SMART SM00283 310 593 3.0E-23 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS07020 6e3594760132c39524ef3a441d21e1c3 594 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 393 591 1.0E-29 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS07020 6e3594760132c39524ef3a441d21e1c3 594 Pfam PF17200 Single Cache domain 2 49 198 4.9E-44 T 25-04-2017 IPR033480 Single Cache domain 2 CLFO_RS03705 fb21b2595ec1e9e98c0b9f1f2474bcd5 255 SMART SM00346 5 95 1.2E-32 T 25-04-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CLFO_RS03705 fb21b2595ec1e9e98c0b9f1f2474bcd5 255 Pfam PF09339 IclR helix-turn-helix domain 7 58 2.8E-17 T 25-04-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CLFO_RS03705 fb21b2595ec1e9e98c0b9f1f2474bcd5 255 SUPERFAMILY SSF55781 71 251 9.16E-56 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS03705 fb21b2595ec1e9e98c0b9f1f2474bcd5 255 Pfam PF01614 Bacterial transcriptional regulator 122 247 3.3E-44 T 25-04-2017 IPR014757 Transcription regulator IclR, C-terminal CLFO_RS03705 fb21b2595ec1e9e98c0b9f1f2474bcd5 255 SUPERFAMILY SSF46785 5 78 1.67E-19 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03705 fb21b2595ec1e9e98c0b9f1f2474bcd5 255 Gene3D G3DSA:3.30.450.40 79 252 2.5E-63 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS03705 fb21b2595ec1e9e98c0b9f1f2474bcd5 255 Gene3D G3DSA:1.10.10.10 3 77 2.4E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS14280 3a59b827065f15d8ab8d2dfd7db83cbf 670 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 5 664 6.5E-268 T 25-04-2017 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 CLFO_RS14280 3a59b827065f15d8ab8d2dfd7db83cbf 670 Pfam PF03030 Inorganic H+ pyrophosphatase 12 654 4.9E-284 T 25-04-2017 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 CLFO_RS14280 3a59b827065f15d8ab8d2dfd7db83cbf 670 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 659 26.436 T 25-04-2017 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 CLFO_RS14280 3a59b827065f15d8ab8d2dfd7db83cbf 670 PIRSF PIRSF001265 2 667 5.5E-279 T 25-04-2017 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 CLFO_RS03185 9c6a9bddca8d55ce0f3fc438c37c2dc5 303 Gene3D G3DSA:3.40.50.300 14 286 3.4E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03185 9c6a9bddca8d55ce0f3fc438c37c2dc5 303 Pfam PF02374 Anion-transporting ATPase 16 295 5.3E-79 T 25-04-2017 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CLFO_RS03185 9c6a9bddca8d55ce0f3fc438c37c2dc5 303 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 19 293 1.3E-69 T 25-04-2017 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 CLFO_RS03185 9c6a9bddca8d55ce0f3fc438c37c2dc5 303 SUPERFAMILY SSF52540 16 291 1.38E-40 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00100 9fdd1d8de8345773fd867d442ac6009b 307 Hamap MF_00568 Quinolinate synthase A [nadA]. 8 306 44.912 T 25-04-2017 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CLFO_RS00100 9fdd1d8de8345773fd867d442ac6009b 307 SUPERFAMILY SSF142754 9 305 3.27E-120 T 25-04-2017 CLFO_RS00100 9fdd1d8de8345773fd867d442ac6009b 307 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 8 306 1.2E-110 T 25-04-2017 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CLFO_RS00100 9fdd1d8de8345773fd867d442ac6009b 307 Pfam PF02445 Quinolinate synthetase A protein 12 305 1.6E-124 T 25-04-2017 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CLFO_RS18855 bd5063f486d7c56f092a18f5628f1746 181 SUPERFAMILY SSF53323 5 179 5.1E-44 T 25-04-2017 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLFO_RS18855 bd5063f486d7c56f092a18f5628f1746 181 Gene3D G3DSA:3.40.920.10 3 179 5.4E-54 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS18855 bd5063f486d7c56f092a18f5628f1746 181 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 6 180 7.1E-26 T 25-04-2017 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 CLFO_RS18855 bd5063f486d7c56f092a18f5628f1746 181 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 12 176 1.1E-36 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 833 840 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 SUPERFAMILY SSF52440 553 671 8.78E-49 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Gene3D G3DSA:3.40.50.1380 937 1059 2.6E-34 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Gene3D G3DSA:3.40.50.20 535 658 1.8E-56 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Gene3D G3DSA:3.40.50.20 5 108 1.7E-42 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 SMART SM00851 953 1040 6.9E-22 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1061 12.885 T 25-04-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1066 13.389 T 25-04-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 4 1051 0.0 T 25-04-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 SMART SM01209 675 839 5.1E-4 T 25-04-2017 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 SMART SM01096 420 543 7.1E-59 T 25-04-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 543 3.3E-35 T 25-04-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.5E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.5E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.5E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.5E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.5E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.5E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.5E-63 T 25-04-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 705 719 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Gene3D G3DSA:3.30.1490.20 682 740 7.2E-23 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Gene3D G3DSA:3.30.1490.20 142 199 6.2E-22 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 SUPERFAMILY SSF52440 1 127 9.78E-49 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Pfam PF02142 MGS-like domain 954 1040 4.1E-17 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 SUPERFAMILY SSF56059 669 930 4.42E-96 T 25-04-2017 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Gene3D G3DSA:3.30.470.20 741 931 3.5E-67 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Gene3D G3DSA:3.30.470.20 200 397 2.3E-76 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Gene3D G3DSA:1.10.1030.10 398 534 8.2E-45 T 25-04-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 SUPERFAMILY SSF52335 940 1056 2.62E-30 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 SUPERFAMILY SSF56059 128 399 2.3E-106 T 25-04-2017 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 669 870 8.9E-39 T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 2.4E-82 T 25-04-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CLFO_RS18040 f16858bb056fa8643df1bd53d02e4e49 1070 SUPERFAMILY SSF48108 395 549 8.5E-45 T 25-04-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS00485 e358b9f82e59de6b0c7003e905896ccc 109 Pfam PF14034 Sporulation protein YtrH 7 105 2.3E-39 T 25-04-2017 IPR025689 Sporulation protein YtrH CLFO_RS18365 d4c1281e3808998bde0ff2183e50fb4e 331 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS18365 d4c1281e3808998bde0ff2183e50fb4e 331 SUPERFAMILY SSF52540 6 255 9.82E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18365 d4c1281e3808998bde0ff2183e50fb4e 331 SMART SM00382 35 241 8.0E-7 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS18365 d4c1281e3808998bde0ff2183e50fb4e 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 317 1.2E-21 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS18365 d4c1281e3808998bde0ff2183e50fb4e 331 Pfam PF00005 ABC transporter 27 184 3.8E-27 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS18365 d4c1281e3808998bde0ff2183e50fb4e 331 Gene3D G3DSA:3.40.50.300 5 259 1.9E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18365 d4c1281e3808998bde0ff2183e50fb4e 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 298 7.9E-17 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS12085 e3d352abb9adb021a73c812ec8587750 316 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 314 4.9E-142 T 25-04-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12085 e3d352abb9adb021a73c812ec8587750 316 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 147 5.8E-62 T 25-04-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12085 e3d352abb9adb021a73c812ec8587750 316 Gene3D G3DSA:3.90.226.10 55 271 4.5E-48 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS12085 e3d352abb9adb021a73c812ec8587750 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 2.6E-47 T 25-04-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12085 e3d352abb9adb021a73c812ec8587750 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 2.6E-47 T 25-04-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12085 e3d352abb9adb021a73c812ec8587750 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 2.6E-47 T 25-04-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12085 e3d352abb9adb021a73c812ec8587750 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 2.6E-47 T 25-04-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12085 e3d352abb9adb021a73c812ec8587750 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 2.6E-47 T 25-04-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12085 e3d352abb9adb021a73c812ec8587750 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 2.6E-47 T 25-04-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12085 e3d352abb9adb021a73c812ec8587750 316 SUPERFAMILY SSF52096 4 315 2.87E-98 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS12085 e3d352abb9adb021a73c812ec8587750 316 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 48.351 T 25-04-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS14765 cd8f02e2e9d91b74d165dd19e6464b19 565 Pfam PF01432 Peptidase family M3 310 548 1.0E-26 T 25-04-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 CLFO_RS14765 cd8f02e2e9d91b74d165dd19e6464b19 565 Pfam PF01432 Peptidase family M3 166 269 3.9E-5 T 25-04-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 CLFO_RS14765 cd8f02e2e9d91b74d165dd19e6464b19 565 Gene3D G3DSA:1.10.1370.10 117 283 4.4E-10 T 25-04-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CLFO_RS14765 cd8f02e2e9d91b74d165dd19e6464b19 565 Gene3D G3DSA:1.10.1370.10 387 533 4.4E-10 T 25-04-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CLFO_RS14765 cd8f02e2e9d91b74d165dd19e6464b19 565 SUPERFAMILY SSF55486 41 559 6.47E-123 T 25-04-2017 CLFO_RS14765 cd8f02e2e9d91b74d165dd19e6464b19 565 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 15 561 9.7E-223 T 25-04-2017 IPR011976 Peptidase M3B, oligoendopeptidase-related clade 2 CLFO_RS05030 9ccc4fde0545b20ea6d7a1e165cd76bb 240 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 104 237 4.5E-42 T 25-04-2017 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS05030 9ccc4fde0545b20ea6d7a1e165cd76bb 240 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 41 238 5.2E-63 T 25-04-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS05030 9ccc4fde0545b20ea6d7a1e165cd76bb 240 PIRSF PIRSF000161 1 240 3.9E-73 T 25-04-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS05030 9ccc4fde0545b20ea6d7a1e165cd76bb 240 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 126 143 - T 25-04-2017 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS05030 9ccc4fde0545b20ea6d7a1e165cd76bb 240 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 238 28.832 T 25-04-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS05030 9ccc4fde0545b20ea6d7a1e165cd76bb 240 SUPERFAMILY SSF51735 2 102 6.38E-34 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS05030 9ccc4fde0545b20ea6d7a1e165cd76bb 240 SUPERFAMILY SSF51735 209 239 6.38E-34 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS05030 9ccc4fde0545b20ea6d7a1e165cd76bb 240 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 101 2.4E-20 T 25-04-2017 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS05030 9ccc4fde0545b20ea6d7a1e165cd76bb 240 SUPERFAMILY SSF55347 103 209 3.27E-28 T 25-04-2017 CLFO_RS05030 9ccc4fde0545b20ea6d7a1e165cd76bb 240 Gene3D G3DSA:3.40.50.720 1 136 7.6E-43 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01515 a6fee0a44cd2bba74ca5f2cb51577380 386 Gene3D G3DSA:3.90.1150.10 256 383 2.0E-41 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS01515 a6fee0a44cd2bba74ca5f2cb51577380 386 Gene3D G3DSA:3.40.640.10 5 253 1.1E-95 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS01515 a6fee0a44cd2bba74ca5f2cb51577380 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 377 2.9E-135 T 25-04-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLFO_RS01515 a6fee0a44cd2bba74ca5f2cb51577380 386 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 5 380 5.4E-163 T 25-04-2017 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase CLFO_RS01515 a6fee0a44cd2bba74ca5f2cb51577380 386 SUPERFAMILY SSF53383 5 382 3.16E-132 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS01515 a6fee0a44cd2bba74ca5f2cb51577380 386 PIRSF PIRSF000390 1 384 8.3E-130 T 25-04-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLFO_RS12290 6f8cb15e6e971bba8dee4064fc118672 604 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 112 602 2.1E-200 T 25-04-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLFO_RS12290 6f8cb15e6e971bba8dee4064fc118672 604 Gene3D G3DSA:3.40.50.300 160 343 8.3E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12290 6f8cb15e6e971bba8dee4064fc118672 604 Gene3D G3DSA:1.10.8.60 344 408 7.0E-20 T 25-04-2017 CLFO_RS12290 6f8cb15e6e971bba8dee4064fc118672 604 Pfam PF06480 FtsH Extracellular 12 99 3.1E-7 T 25-04-2017 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 CLFO_RS12290 6f8cb15e6e971bba8dee4064fc118672 604 Pfam PF01434 Peptidase family M41 395 601 2.3E-65 T 25-04-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CLFO_RS12290 6f8cb15e6e971bba8dee4064fc118672 604 ProSitePatterns PS00674 AAA-protein family signature. 304 322 - T 25-04-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CLFO_RS12290 6f8cb15e6e971bba8dee4064fc118672 604 SMART SM00382 197 336 9.0E-23 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12290 6f8cb15e6e971bba8dee4064fc118672 604 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 9 604 33.415 T 25-04-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLFO_RS12290 6f8cb15e6e971bba8dee4064fc118672 604 SUPERFAMILY SSF140990 415 603 4.19E-65 T 25-04-2017 CLFO_RS12290 6f8cb15e6e971bba8dee4064fc118672 604 SUPERFAMILY SSF52540 162 430 3.15E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12290 6f8cb15e6e971bba8dee4064fc118672 604 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 333 1.0E-45 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS12290 6f8cb15e6e971bba8dee4064fc118672 604 Gene3D G3DSA:3.40.50.300 554 600 5.2E-4 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12590 041d20b9efcc8458b8b0cd1dee5ee459 223 SUPERFAMILY SSF52540 4 221 1.36E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12590 041d20b9efcc8458b8b0cd1dee5ee459 223 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS12590 041d20b9efcc8458b8b0cd1dee5ee459 223 SMART SM00382 28 217 7.7E-9 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12590 041d20b9efcc8458b8b0cd1dee5ee459 223 Pfam PF00005 ABC transporter 20 168 1.5E-27 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS12590 041d20b9efcc8458b8b0cd1dee5ee459 223 Gene3D G3DSA:3.40.50.300 4 220 3.6E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12065 f14cec214f4cad5e7fa03a340f4d1fe3 261 Pfam PF00005 ABC transporter 19 161 1.3E-32 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS12065 f14cec214f4cad5e7fa03a340f4d1fe3 261 Gene3D G3DSA:3.40.50.300 4 225 1.2E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12065 f14cec214f4cad5e7fa03a340f4d1fe3 261 SUPERFAMILY SSF52540 4 217 1.89E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12065 f14cec214f4cad5e7fa03a340f4d1fe3 261 SMART SM00382 28 214 1.3E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS20060 52b689690e73569141bca678246a8c8a 370 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 205 357 1.1E-18 T 25-04-2017 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLFO_RS20060 52b689690e73569141bca678246a8c8a 370 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 363 8.0E-68 T 25-04-2017 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 SMART SM01130 1 287 3.4E-131 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 PIRSF PIRSF001365 1 289 2.0E-97 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 25-04-2017 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 2.7E-31 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 2.7E-31 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 2.7E-31 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 2.7E-31 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 25-04-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 SUPERFAMILY SSF51569 1 286 2.83E-100 T 25-04-2017 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 286 63.326 T 25-04-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 Gene3D G3DSA:3.20.20.70 1 289 4.6E-115 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 Pfam PF00701 Dihydrodipicolinate synthetase family 2 285 2.8E-96 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS05025 3e60388690515a3f02d3adb16844a205 290 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 283 3.7E-104 T 25-04-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS18160 376e28118d732e209f865cc6e4de675b 482 SUPERFAMILY SSF51905 423 480 5.38E-69 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18160 376e28118d732e209f865cc6e4de675b 482 SUPERFAMILY SSF51905 38 296 5.38E-69 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18160 376e28118d732e209f865cc6e4de675b 482 Gene3D G3DSA:3.90.700.10 279 415 1.5E-45 T 25-04-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS18160 376e28118d732e209f865cc6e4de675b 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 428 450 3.7E-6 T 25-04-2017 CLFO_RS18160 376e28118d732e209f865cc6e4de675b 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 44 63 3.7E-6 T 25-04-2017 CLFO_RS18160 376e28118d732e209f865cc6e4de675b 482 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 43 476 5.6E-157 T 25-04-2017 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 CLFO_RS18160 376e28118d732e209f865cc6e4de675b 482 Pfam PF00890 FAD binding domain 43 464 4.7E-103 T 25-04-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS18160 376e28118d732e209f865cc6e4de675b 482 Gene3D G3DSA:3.50.50.60 420 480 2.1E-106 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18160 376e28118d732e209f865cc6e4de675b 482 Gene3D G3DSA:3.50.50.60 29 273 2.1E-106 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18160 376e28118d732e209f865cc6e4de675b 482 SUPERFAMILY SSF56425 279 424 1.26E-46 T 25-04-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS15775 beef0b33b9a2d3c10da9337da0b4d99b 123 SMART SM00028 21 54 0.0014 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15775 beef0b33b9a2d3c10da9337da0b4d99b 123 SMART SM00028 55 88 2.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15775 beef0b33b9a2d3c10da9337da0b4d99b 123 SMART SM00028 89 122 15.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15775 beef0b33b9a2d3c10da9337da0b4d99b 123 Pfam PF13181 Tetratricopeptide repeat 90 121 0.0043 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15775 beef0b33b9a2d3c10da9337da0b4d99b 123 Pfam PF14559 Tetratricopeptide repeat 31 75 1.9E-8 T 25-04-2017 CLFO_RS15775 beef0b33b9a2d3c10da9337da0b4d99b 123 Gene3D G3DSA:1.25.40.10 15 120 9.7E-24 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS15775 beef0b33b9a2d3c10da9337da0b4d99b 123 SUPERFAMILY SSF48452 17 122 1.06E-22 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS07945 b5fc9004f4d853911d5561904c0594ef 145 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 4 138 1.5E-64 T 25-04-2017 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0030435|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 CLFO_RS07945 b5fc9004f4d853911d5561904c0594ef 145 SUPERFAMILY SSF55874 27 135 1.96E-20 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS07945 b5fc9004f4d853911d5561904c0594ef 145 SMART SM00387 37 141 7.8E-9 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS07945 b5fc9004f4d853911d5561904c0594ef 145 Gene3D G3DSA:3.30.565.10 31 137 1.1E-21 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS07945 b5fc9004f4d853911d5561904c0594ef 145 Pfam PF13581 Histidine kinase-like ATPase domain 19 137 1.9E-24 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS07945 b5fc9004f4d853911d5561904c0594ef 145 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 3 141 36.415 T 25-04-2017 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0030435|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 CLFO_RS16595 25e77f54c28d290fc0da492aa9f92a9f 256 Gene3D G3DSA:3.40.50.2300 4 127 6.8E-28 T 25-04-2017 CLFO_RS16595 25e77f54c28d290fc0da492aa9f92a9f 256 Pfam PF12833 Helix-turn-helix domain 170 247 6.1E-20 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS16595 25e77f54c28d290fc0da492aa9f92a9f 256 Gene3D G3DSA:1.10.10.60 200 248 1.9E-16 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16595 25e77f54c28d290fc0da492aa9f92a9f 256 SUPERFAMILY SSF46689 148 197 2.51E-8 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16595 25e77f54c28d290fc0da492aa9f92a9f 256 Gene3D G3DSA:1.10.10.60 142 199 2.8E-18 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16595 25e77f54c28d290fc0da492aa9f92a9f 256 SUPERFAMILY SSF52172 4 122 5.69E-28 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS16595 25e77f54c28d290fc0da492aa9f92a9f 256 SMART SM00448 2 116 7.4E-24 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS16595 25e77f54c28d290fc0da492aa9f92a9f 256 SMART SM00342 163 246 2.9E-30 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS16595 25e77f54c28d290fc0da492aa9f92a9f 256 SUPERFAMILY SSF46689 199 250 8.06E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16595 25e77f54c28d290fc0da492aa9f92a9f 256 Pfam PF00072 Response regulator receiver domain 4 114 5.5E-19 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS09210 4b735902f17510d46da2ae1e952fa1db 224 SUPERFAMILY SSF53448 148 195 7.09E-9 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS09210 4b735902f17510d46da2ae1e952fa1db 224 SUPERFAMILY SSF53448 23 112 7.09E-9 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS09210 4b735902f17510d46da2ae1e952fa1db 224 Gene3D G3DSA:3.90.550.10 55 193 1.7E-5 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS09210 4b735902f17510d46da2ae1e952fa1db 224 Pfam PF04765 Protein of unknown function (DUF616) 4 212 1.3E-21 T 25-04-2017 IPR006852 Protein of unknown function DUF616 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 Hamap MF_00347 Polyphosphate kinase [ppk]. 10 688 35.0 T 25-04-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 12 682 1.4E-288 T 25-04-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 Gene3D G3DSA:3.30.1840.10 116 306 1.2E-70 T 25-04-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 Pfam PF13089 Polyphosphate kinase N-terminal domain 13 118 6.2E-42 T 25-04-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 PIRSF PIRSF015589 1 700 2.4E-292 T 25-04-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 Gene3D G3DSA:3.30.870.10 506 689 2.4E-73 T 25-04-2017 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 Pfam PF02503 Polyphosphate kinase middle domain 128 327 3.3E-76 T 25-04-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 Pfam PF13090 Polyphosphate kinase C-terminal domain 336 682 4.3E-161 T 25-04-2017 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 SUPERFAMILY SSF56024 323 500 1.41E-56 T 25-04-2017 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 SUPERFAMILY SSF143724 117 319 1.69E-64 T 25-04-2017 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 SUPERFAMILY SSF140356 10 114 7.98E-41 T 25-04-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 SUPERFAMILY SSF56024 506 690 1.13E-71 T 25-04-2017 CLFO_RS01585 f71a265bc52a5af6a724569f69c9455e 715 Gene3D G3DSA:3.30.870.10 324 505 6.8E-79 T 25-04-2017 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 Gene3D G3DSA:3.40.50.880 543 712 4.6E-44 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 Gene3D G3DSA:2.40.180.10 10 388 3.5E-184 T 25-04-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 Pfam PF00199 Catalase 33 418 3.6E-180 T 25-04-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 ProSitePatterns PS00438 Catalase proximal active site signature. 69 85 - T 25-04-2017 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 Pfam PF01965 DJ-1/PfpI family 544 677 2.3E-12 T 25-04-2017 IPR002818 DJ-1/PfpI CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 Pfam PF06628 Catalase-related immune-responsive 449 512 8.1E-22 T 25-04-2017 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 PRINTS PR00067 Catalase signature 46 69 5.7E-70 T 25-04-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 PRINTS PR00067 Catalase signature 318 345 5.7E-70 T 25-04-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 PRINTS PR00067 Catalase signature 149 167 5.7E-70 T 25-04-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 PRINTS PR00067 Catalase signature 130 147 5.7E-70 T 25-04-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 PRINTS PR00067 Catalase signature 350 376 5.7E-70 T 25-04-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 PRINTS PR00067 Catalase signature 109 127 5.7E-70 T 25-04-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 SUPERFAMILY SSF52317 542 701 4.0E-20 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 SMART SM01060 33 421 5.0E-272 T 25-04-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 PIRSF PIRSF038927 1 710 0.0 T 25-04-2017 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 SUPERFAMILY SSF56634 10 534 1.7E-224 T 25-04-2017 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS11960 efadcda500a28985de7ec5c7b45dbba6 712 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 363 371 - T 25-04-2017 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 CLFO_RS00200 b9f61e4537acc9ff5214f88c47b6fa9c 199 Gene3D G3DSA:2.170.120.20 98 191 3.9E-15 T 25-04-2017 IPR020057 Ribosomal protein L25, beta domain CLFO_RS00200 b9f61e4537acc9ff5214f88c47b6fa9c 199 Pfam PF01386 Ribosomal L25p family 6 92 3.2E-18 T 25-04-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLFO_RS00200 b9f61e4537acc9ff5214f88c47b6fa9c 199 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 182 1.5E-13 T 25-04-2017 IPR020057 Ribosomal protein L25, beta domain CLFO_RS00200 b9f61e4537acc9ff5214f88c47b6fa9c 199 Gene3D G3DSA:2.40.240.10 6 94 5.2E-20 T 25-04-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLFO_RS00200 b9f61e4537acc9ff5214f88c47b6fa9c 199 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 7.0E-23 T 25-04-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLFO_RS00200 b9f61e4537acc9ff5214f88c47b6fa9c 199 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 183 20.053 T 25-04-2017 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLFO_RS00200 b9f61e4537acc9ff5214f88c47b6fa9c 199 SUPERFAMILY SSF50715 10 183 8.02E-39 T 25-04-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLFO_RS00200 b9f61e4537acc9ff5214f88c47b6fa9c 199 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 181 7.1E-33 T 25-04-2017 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CLFO_RS08800 09c73b7920a5c44130ace12163c7d9f2 111 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 5 109 8.8E-22 T 25-04-2017 IPR008767 Bacteriophage SPP1, head-tail adaptor CLFO_RS08800 09c73b7920a5c44130ace12163c7d9f2 111 Pfam PF05521 Phage head-tail joining protein 7 107 2.0E-27 T 25-04-2017 IPR008767 Bacteriophage SPP1, head-tail adaptor CLFO_RS00865 516878203fa5e67e6f467e12eddd41c9 252 Pfam PF00977 Histidine biosynthesis protein 5 234 1.1E-91 T 25-04-2017 IPR006062 Histidine biosynthesis GO:0000105 CLFO_RS00865 516878203fa5e67e6f467e12eddd41c9 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 1.5E-118 T 25-04-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CLFO_RS00865 516878203fa5e67e6f467e12eddd41c9 252 SUPERFAMILY SSF51366 1 251 1.02E-84 T 25-04-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLFO_RS00865 516878203fa5e67e6f467e12eddd41c9 252 Gene3D G3DSA:3.20.20.70 4 251 1.7E-107 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS00865 516878203fa5e67e6f467e12eddd41c9 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 49.276 T 25-04-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CLFO_RS15365 0fc1c61f9ad64aebb7d9d93cb743e14f 381 Gene3D G3DSA:3.40.50.150 93 366 2.6E-91 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS15365 0fc1c61f9ad64aebb7d9d93cb743e14f 381 SUPERFAMILY SSF53335 103 368 2.43E-74 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS15365 0fc1c61f9ad64aebb7d9d93cb743e14f 381 PIRSF PIRSF003085 2 380 1.3E-122 T 25-04-2017 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CLFO_RS15365 0fc1c61f9ad64aebb7d9d93cb743e14f 381 Pfam PF02353 Mycolic acid cyclopropane synthetase 95 362 1.8E-99 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 SMART SM01005 249 376 4.1E-59 T 25-04-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 Gene3D G3DSA:2.40.37.10 225 382 7.6E-56 T 25-04-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 Pfam PF00842 Alanine racemase, C-terminal domain 249 375 3.5E-39 T 25-04-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 SUPERFAMILY SSF51419 14 250 9.81E-70 T 25-04-2017 IPR029066 PLP-binding barrel CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 TIGRFAM TIGR00492 alr: alanine racemase 8 377 1.3E-117 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 Gene3D G3DSA:3.20.20.10 16 224 1.6E-76 T 25-04-2017 IPR029066 PLP-binding barrel CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 SUPERFAMILY SSF50621 244 383 1.22E-46 T 25-04-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 Hamap MF_01201 Alanine racemase. 7 376 34.498 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 Pfam PF01168 Alanine racemase, N-terminal domain 14 235 1.1E-71 T 25-04-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 38 48 - T 25-04-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 PRINTS PR00992 Alanine racemase signature 69 87 5.7E-62 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 PRINTS PR00992 Alanine racemase signature 165 176 5.7E-62 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 PRINTS PR00992 Alanine racemase signature 208 235 5.7E-62 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 PRINTS PR00992 Alanine racemase signature 33 49 5.7E-62 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 PRINTS PR00992 Alanine racemase signature 358 371 5.7E-62 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 PRINTS PR00992 Alanine racemase signature 130 142 5.7E-62 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 PRINTS PR00992 Alanine racemase signature 265 280 5.7E-62 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 PRINTS PR00992 Alanine racemase signature 303 320 5.7E-62 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS17895 a47c170b7f8d98b6a610ae8ddfe40c12 390 PRINTS PR00992 Alanine racemase signature 282 297 5.7E-62 T 25-04-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS07935 9934b9d4a53739361bd5db103beb1964 742 ProSitePatterns PS00850 Glycine radical domain signature. 711 719 - T 25-04-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CLFO_RS07935 9934b9d4a53739361bd5db103beb1964 742 Gene3D G3DSA:3.20.70.20 4 739 0.0 T 25-04-2017 CLFO_RS07935 9934b9d4a53739361bd5db103beb1964 742 PIRSF PIRSF000379 2 741 0.0 T 25-04-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CLFO_RS07935 9934b9d4a53739361bd5db103beb1964 742 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 5 740 0.0 T 25-04-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CLFO_RS07935 9934b9d4a53739361bd5db103beb1964 742 Pfam PF01228 Glycine radical 616 722 1.4E-43 T 25-04-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CLFO_RS07935 9934b9d4a53739361bd5db103beb1964 742 SUPERFAMILY SSF51998 5 739 7.02E-287 T 25-04-2017 CLFO_RS07935 9934b9d4a53739361bd5db103beb1964 742 Pfam PF02901 Pyruvate formate lyase-like 15 600 5.4E-213 T 25-04-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 CLFO_RS01430 b05b380067dd9dbe1fb4e80f24546572 447 Pfam PF00501 AMP-binding enzyme 12 356 2.0E-34 T 25-04-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CLFO_RS01430 b05b380067dd9dbe1fb4e80f24546572 447 Pfam PF13193 AMP-binding enzyme C-terminal domain 365 434 9.2E-7 T 25-04-2017 IPR025110 AMP-binding enzyme C-terminal domain CLFO_RS01430 b05b380067dd9dbe1fb4e80f24546572 447 ProSitePatterns PS00455 Putative AMP-binding domain signature. 135 146 - T 25-04-2017 IPR020845 AMP-binding, conserved site CLFO_RS01430 b05b380067dd9dbe1fb4e80f24546572 447 Gene3D G3DSA:2.30.38.10 303 350 7.9E-7 T 25-04-2017 CLFO_RS01430 b05b380067dd9dbe1fb4e80f24546572 447 Gene3D G3DSA:3.30.300.30 352 446 3.4E-14 T 25-04-2017 CLFO_RS01430 b05b380067dd9dbe1fb4e80f24546572 447 Gene3D G3DSA:3.40.50.980 6 142 4.2E-16 T 25-04-2017 CLFO_RS01430 b05b380067dd9dbe1fb4e80f24546572 447 Gene3D G3DSA:3.40.50.980 143 286 3.2E-26 T 25-04-2017 CLFO_RS01430 b05b380067dd9dbe1fb4e80f24546572 447 SUPERFAMILY SSF56801 4 446 6.93E-72 T 25-04-2017 CLFO_RS09565 321bb3577c59d91c6faea4abecc533be 132 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 2.9E-10 T 25-04-2017 IPR012902 Prokaryotic N-terminal methylation site CLFO_RS09565 321bb3577c59d91c6faea4abecc533be 132 Pfam PF13633 Prokaryotic N-terminal methylation site 13 36 4.6E-11 T 25-04-2017 IPR012902 Prokaryotic N-terminal methylation site CLFO_RS09565 321bb3577c59d91c6faea4abecc533be 132 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 25-04-2017 IPR012902 Prokaryotic N-terminal methylation site CLFO_RS09565 321bb3577c59d91c6faea4abecc533be 132 SUPERFAMILY SSF54523 15 130 6.12E-18 T 25-04-2017 CLFO_RS09565 321bb3577c59d91c6faea4abecc533be 132 Gene3D G3DSA:3.30.700.10 15 76 1.9E-10 T 25-04-2017 CLFO_RS20800 31124bc5aa729eb1d309d8217d8cc3f1 265 Pfam PF12833 Helix-turn-helix domain 187 261 3.4E-15 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS20800 31124bc5aa729eb1d309d8217d8cc3f1 265 SMART SM00342 178 260 6.2E-19 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS20800 31124bc5aa729eb1d309d8217d8cc3f1 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 229 244 1.5E-6 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS20800 31124bc5aa729eb1d309d8217d8cc3f1 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 260 1.5E-6 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS20800 31124bc5aa729eb1d309d8217d8cc3f1 265 SUPERFAMILY SSF51215 22 148 3.4E-15 T 25-04-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLFO_RS20800 31124bc5aa729eb1d309d8217d8cc3f1 265 SUPERFAMILY SSF46689 216 262 1.79E-10 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS20800 31124bc5aa729eb1d309d8217d8cc3f1 265 Gene3D G3DSA:2.60.120.280 20 107 1.6E-15 T 25-04-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLFO_RS20800 31124bc5aa729eb1d309d8217d8cc3f1 265 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 256 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS20800 31124bc5aa729eb1d309d8217d8cc3f1 265 SUPERFAMILY SSF46689 162 212 4.93E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS20800 31124bc5aa729eb1d309d8217d8cc3f1 265 Gene3D G3DSA:1.10.10.60 216 262 8.8E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS20800 31124bc5aa729eb1d309d8217d8cc3f1 265 Pfam PF02311 AraC-like ligand binding domain 27 119 3.9E-16 T 25-04-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLFO_RS20800 31124bc5aa729eb1d309d8217d8cc3f1 265 Gene3D G3DSA:1.10.10.60 160 215 1.0E-9 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS03575 ef42a283b024df9fa80e78e29bc8f491 238 Gene3D G3DSA:3.40.50.1000 1 215 4.9E-27 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS03575 ef42a283b024df9fa80e78e29bc8f491 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.5E-7 T 25-04-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLFO_RS03575 ef42a283b024df9fa80e78e29bc8f491 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 1.5E-7 T 25-04-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLFO_RS03575 ef42a283b024df9fa80e78e29bc8f491 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 166 186 1.5E-7 T 25-04-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLFO_RS03575 ef42a283b024df9fa80e78e29bc8f491 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 193 206 1.5E-7 T 25-04-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLFO_RS03575 ef42a283b024df9fa80e78e29bc8f491 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 164 1.5E-7 T 25-04-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CLFO_RS03575 ef42a283b024df9fa80e78e29bc8f491 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 199 1.9E-15 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS03575 ef42a283b024df9fa80e78e29bc8f491 238 SUPERFAMILY SSF56784 1 232 3.74E-27 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS15250 e543852ed7e5897466e61df2e260a8c0 517 Pfam PF01144 Coenzyme A transferase 6 241 6.5E-32 T 25-04-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CLFO_RS15250 e543852ed7e5897466e61df2e260a8c0 517 Gene3D G3DSA:3.40.810.20 273 509 5.6E-65 T 25-04-2017 CLFO_RS15250 e543852ed7e5897466e61df2e260a8c0 517 Gene3D G3DSA:3.40.1080.10 4 241 6.2E-74 T 25-04-2017 CLFO_RS15250 e543852ed7e5897466e61df2e260a8c0 517 SMART SM00882 5 242 3.8E-74 T 25-04-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CLFO_RS15250 e543852ed7e5897466e61df2e260a8c0 517 SUPERFAMILY SSF100950 4 252 2.16E-92 T 25-04-2017 CLFO_RS15250 e543852ed7e5897466e61df2e260a8c0 517 PIRSF PIRSF000858 1 517 1.5E-236 T 25-04-2017 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 CLFO_RS15250 e543852ed7e5897466e61df2e260a8c0 517 SUPERFAMILY SSF100950 275 513 3.35E-77 T 25-04-2017 CLFO_RS01060 b41cf836ab746e9f125e561a85389199 333 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 57 328 5.5E-77 T 25-04-2017 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 CLFO_RS01060 b41cf836ab746e9f125e561a85389199 333 Pfam PF08486 Stage II sporulation protein 52 161 2.0E-24 T 25-04-2017 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal CLFO_RS01060 b41cf836ab746e9f125e561a85389199 333 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 35 328 1.0E-113 T 25-04-2017 IPR014225 Sporulation stage II, protein D firmicutes CLFO_RS00270 58fd19112636bb1552de2c0250fa5441 212 Gene3D G3DSA:3.40.50.720 4 113 2.6E-35 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS00270 58fd19112636bb1552de2c0250fa5441 212 Gene3D G3DSA:3.30.160.110 114 148 4.6E-13 T 25-04-2017 CLFO_RS00270 58fd19112636bb1552de2c0250fa5441 212 Pfam PF14824 Sirohaem biosynthesis protein central 120 145 1.5E-10 T 25-04-2017 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CLFO_RS00270 58fd19112636bb1552de2c0250fa5441 212 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 5 185 3.5E-41 T 25-04-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CLFO_RS00270 58fd19112636bb1552de2c0250fa5441 212 SUPERFAMILY SSF51735 4 113 6.66E-21 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS00270 58fd19112636bb1552de2c0250fa5441 212 SUPERFAMILY SSF75615 110 199 9.81E-18 T 25-04-2017 CLFO_RS00270 58fd19112636bb1552de2c0250fa5441 212 Pfam PF13241 Putative NAD(P)-binding 7 116 9.4E-29 T 25-04-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CLFO_RS02560 bcd9ed7bab318470b83652afa549bcf4 128 Pfam PF09585 Conserved hypothetical protein (Lin0512_fam) 5 116 4.4E-42 T 25-04-2017 IPR011719 Conserved hypothetical protein CHP02058 CLFO_RS02560 bcd9ed7bab318470b83652afa549bcf4 128 TIGRFAM TIGR02058 lin0512_fam: conserved hypothetical protein 4 117 3.7E-32 T 25-04-2017 IPR011719 Conserved hypothetical protein CHP02058 CLFO_RS02560 bcd9ed7bab318470b83652afa549bcf4 128 Gene3D G3DSA:3.30.1330.20 1 118 4.0E-45 T 25-04-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 CLFO_RS04975 8b5ecf222793bf4c549c976a6b34921e 332 Gene3D G3DSA:3.40.718.10 2 324 8.4E-118 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS04975 8b5ecf222793bf4c549c976a6b34921e 332 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 327 32.908 T 25-04-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CLFO_RS04975 8b5ecf222793bf4c549c976a6b34921e 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 322 5.8E-99 T 25-04-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CLFO_RS04975 8b5ecf222793bf4c549c976a6b34921e 332 SUPERFAMILY SSF53659 4 326 1.17E-97 T 25-04-2017 CLFO_RS04975 8b5ecf222793bf4c549c976a6b34921e 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 1.1E-97 T 25-04-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CLFO_RS01350 319f55caa108eb56820e9778f5a6d3f9 164 Gene3D G3DSA:1.20.58.300 4 134 3.5E-11 T 25-04-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CLFO_RS01350 319f55caa108eb56820e9778f5a6d3f9 164 Pfam PF05130 FlgN protein 1 150 1.7E-26 T 25-04-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CLFO_RS01350 319f55caa108eb56820e9778f5a6d3f9 164 SUPERFAMILY SSF140566 4 135 1.31E-17 T 25-04-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CLFO_RS13570 6c6c8edb7abba46e8d6ee1f42ac71076 789 Pfam PF00395 S-layer homology domain 663 706 3.5E-9 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS13570 6c6c8edb7abba46e8d6ee1f42ac71076 789 Pfam PF00395 S-layer homology domain 605 647 5.5E-16 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS13570 6c6c8edb7abba46e8d6ee1f42ac71076 789 Pfam PF00395 S-layer homology domain 733 779 5.3E-4 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS04155 7a2524fdb7943d85830d2496326a8669 232 Pfam PF04239 Protein of unknown function (DUF421) 88 156 1.9E-21 T 25-04-2017 IPR007353 Protein of unknown function DUF421 CLFO_RS04155 7a2524fdb7943d85830d2496326a8669 232 Pfam PF04239 Protein of unknown function (DUF421) 173 222 1.0E-8 T 25-04-2017 IPR007353 Protein of unknown function DUF421 CLFO_RS04155 7a2524fdb7943d85830d2496326a8669 232 Gene3D G3DSA:3.30.240.20 171 228 4.5E-17 T 25-04-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLFO_RS04155 7a2524fdb7943d85830d2496326a8669 232 Gene3D G3DSA:3.30.240.20 80 153 4.8E-24 T 25-04-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 Gene3D G3DSA:1.10.287.130 231 303 2.4E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 SMART SM00387 353 461 9.9E-33 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 459 3.1E-23 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 7.6E-11 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 7.6E-11 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 7.6E-11 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 Pfam PF00672 HAMP domain 169 235 1.7E-11 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 SUPERFAMILY SSF158472 189 236 6.15E-8 T 25-04-2017 CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 Gene3D G3DSA:3.30.565.10 314 459 2.0E-43 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 SMART SM00304 188 240 5.5E-5 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 304 1.2E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 SUPERFAMILY SSF47384 224 307 6.47E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 SMART SM00388 241 307 1.0E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 SUPERFAMILY SSF55874 297 459 1.96E-44 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16825 93e534e846642f107d362898f3e3e779 463 Gene3D G3DSA:3.30.450.20 45 159 8.0E-7 T 25-04-2017 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 8 493 82.764 T 25-04-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 243 6.2E-49 T 25-04-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 335 361 6.2E-49 T 25-04-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 150 163 6.2E-49 T 25-04-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 174 202 6.2E-49 T 25-04-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 244 260 6.2E-49 T 25-04-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 Gene3D G3DSA:3.40.50.720 8 193 1.1E-64 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 12 194 2.2E-57 T 25-04-2017 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 493 2.9E-194 T 25-04-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 SUPERFAMILY SSF55347 189 492 2.94E-115 T 25-04-2017 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 SUPERFAMILY SSF51735 8 197 6.5E-55 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 Gene3D G3DSA:3.30.360.10 194 491 1.0E-120 T 25-04-2017 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 196 491 1.4E-117 T 25-04-2017 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 184 190 - T 25-04-2017 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CLFO_RS12030 a77e1292ecc127762b1b64763e1a00b6 494 PIRSF PIRSF000110 1 494 3.7E-179 T 25-04-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CLFO_RS03565 f4e30402db6bdb02a926eac1ae6a3b62 418 SMART SM00852 4 171 9.7E-44 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS03565 f4e30402db6bdb02a926eac1ae6a3b62 418 PIRSF PIRSF006728 1 413 2.1E-162 T 25-04-2017 IPR008135 Competence-induced protein CinA CLFO_RS03565 f4e30402db6bdb02a926eac1ae6a3b62 418 Pfam PF02464 Competence-damaged protein 256 408 4.0E-56 T 25-04-2017 IPR008136 CinA, C-terminal CLFO_RS03565 f4e30402db6bdb02a926eac1ae6a3b62 418 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 408 1.8E-130 T 25-04-2017 IPR008135 Competence-induced protein CinA CLFO_RS03565 f4e30402db6bdb02a926eac1ae6a3b62 418 Gene3D G3DSA:3.90.950.20 247 409 1.8E-55 T 25-04-2017 IPR008136 CinA, C-terminal CLFO_RS03565 f4e30402db6bdb02a926eac1ae6a3b62 418 Pfam PF00994 Probable molybdopterin binding domain 4 169 5.9E-36 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS03565 f4e30402db6bdb02a926eac1ae6a3b62 418 Gene3D G3DSA:3.40.980.10 1 209 3.1E-38 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS03565 f4e30402db6bdb02a926eac1ae6a3b62 418 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 261 408 1.6E-46 T 25-04-2017 IPR008136 CinA, C-terminal CLFO_RS03565 f4e30402db6bdb02a926eac1ae6a3b62 418 SUPERFAMILY SSF142433 248 409 5.62E-54 T 25-04-2017 IPR008136 CinA, C-terminal CLFO_RS03565 f4e30402db6bdb02a926eac1ae6a3b62 418 SUPERFAMILY SSF53218 1 204 1.26E-41 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS03565 f4e30402db6bdb02a926eac1ae6a3b62 418 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 165 3.1E-29 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS03565 f4e30402db6bdb02a926eac1ae6a3b62 418 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 418 174.011 T 25-04-2017 IPR008135 Competence-induced protein CinA CLFO_RS02865 0af9a1988afe07608cbcb1c6970a4534 388 Gene3D G3DSA:3.60.21.10 1 267 9.1E-68 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS02865 0af9a1988afe07608cbcb1c6970a4534 388 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 270 358 3.6E-13 T 25-04-2017 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CLFO_RS02865 0af9a1988afe07608cbcb1c6970a4534 388 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 247 2.8E-51 T 25-04-2017 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 CLFO_RS02865 0af9a1988afe07608cbcb1c6970a4534 388 Pfam PF00149 Calcineurin-like phosphoesterase 1 219 1.2E-16 T 25-04-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CLFO_RS02865 0af9a1988afe07608cbcb1c6970a4534 388 SUPERFAMILY SSF56300 1 324 1.12E-51 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS16170 091504544fc00c7a5966de1471e5111a 587 Gene3D G3DSA:3.40.50.300 348 577 2.4E-74 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16170 091504544fc00c7a5966de1471e5111a 587 Pfam PF00005 ABC transporter 364 513 4.2E-32 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS16170 091504544fc00c7a5966de1471e5111a 587 SUPERFAMILY SSF52540 340 584 1.07E-87 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16170 091504544fc00c7a5966de1471e5111a 587 SMART SM00382 373 565 1.5E-15 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS16170 091504544fc00c7a5966de1471e5111a 587 Gene3D G3DSA:1.20.1560.10 16 330 1.2E-86 T 25-04-2017 CLFO_RS16170 091504544fc00c7a5966de1471e5111a 587 Pfam PF00664 ABC transporter transmembrane region 28 301 2.0E-50 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS16170 091504544fc00c7a5966de1471e5111a 587 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS16170 091504544fc00c7a5966de1471e5111a 587 SUPERFAMILY SSF90123 16 331 1.44E-82 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS01955 80d1dfcbc88674b282a9970595ff0d93 132 PIRSF PIRSF014972 2 132 1.5E-47 T 25-04-2017 IPR025540 Fluoroacetyl-CoA thioesterase CLFO_RS01955 80d1dfcbc88674b282a9970595ff0d93 132 Gene3D G3DSA:3.10.129.10 1 130 2.0E-51 T 25-04-2017 IPR029069 HotDog domain CLFO_RS01955 80d1dfcbc88674b282a9970595ff0d93 132 Pfam PF03061 Thioesterase superfamily 37 106 1.2E-4 T 25-04-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 CLFO_RS01955 80d1dfcbc88674b282a9970595ff0d93 132 SUPERFAMILY SSF54637 1 127 2.14E-45 T 25-04-2017 IPR029069 HotDog domain CLFO_RS01975 ea4c3bac818b629fa3fc2abbca88bef3 82 SUPERFAMILY SSF143120 1 78 2.35E-16 T 25-04-2017 CLFO_RS01975 ea4c3bac818b629fa3fc2abbca88bef3 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 69 3.7E-11 T 25-04-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CLFO_RS20890 58cd8216ab6cce1293747514e582b798 469 Pfam PF00155 Aminotransferase class I and II 135 423 6.0E-13 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS20890 58cd8216ab6cce1293747514e582b798 469 Gene3D G3DSA:3.40.640.10 134 349 1.3E-52 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS20890 58cd8216ab6cce1293747514e582b798 469 SUPERFAMILY SSF53383 90 459 2.77E-78 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS20890 58cd8216ab6cce1293747514e582b798 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 6.9E-14 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20890 58cd8216ab6cce1293747514e582b798 469 Gene3D G3DSA:1.10.10.10 5 78 1.4E-19 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20890 58cd8216ab6cce1293747514e582b798 469 SMART SM00345 18 77 5.3E-12 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20890 58cd8216ab6cce1293747514e582b798 469 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 5.7E-7 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20890 58cd8216ab6cce1293747514e582b798 469 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 5.7E-7 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20890 58cd8216ab6cce1293747514e582b798 469 SUPERFAMILY SSF46785 8 79 6.23E-17 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20685 714616c2c1997fee9211e0af11c7e2b6 561 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 3 556 40.371 T 25-04-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS20685 714616c2c1997fee9211e0af11c7e2b6 561 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 121 131 - T 25-04-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS20685 714616c2c1997fee9211e0af11c7e2b6 561 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 555 1.3E-196 T 25-04-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS20685 714616c2c1997fee9211e0af11c7e2b6 561 Pfam PF00920 Dehydratase family 33 553 7.5E-198 T 25-04-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS20685 714616c2c1997fee9211e0af11c7e2b6 561 SUPERFAMILY SSF52016 378 556 7.85E-54 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS20685 714616c2c1997fee9211e0af11c7e2b6 561 SUPERFAMILY SSF143975 4 375 3.66E-128 T 25-04-2017 CLFO_RS02755 b18017fb708e83d3315571b3831d5684 296 Gene3D G3DSA:3.20.20.370 97 261 6.3E-25 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS02755 b18017fb708e83d3315571b3831d5684 296 Pfam PF01522 Polysaccharide deacetylase 123 256 1.8E-21 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS02755 b18017fb708e83d3315571b3831d5684 296 SUPERFAMILY SSF88713 85 269 7.23E-33 T 25-04-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 Gene3D G3DSA:3.30.70.20 143 180 2.4E-12 T 25-04-2017 CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 219 230 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 Gene3D G3DSA:3.30.70.20 181 227 1.9E-12 T 25-04-2017 CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 280 291 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 248 259 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 Pfam PF13187 4Fe-4S dicluster domain 218 263 1.3E-7 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 Gene3D G3DSA:3.30.70.20 228 253 1.3E-13 T 25-04-2017 CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 Gene3D G3DSA:3.30.70.20 286 327 2.9E-14 T 25-04-2017 CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 SUPERFAMILY SSF54862 205 327 3.6E-26 T 25-04-2017 CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 6 102 6.9E-22 T 25-04-2017 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 174 185 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 Pfam PF00037 4Fe-4S binding domain 168 189 1.1E-7 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 310 321 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 Pfam PF14697 4Fe-4S dicluster domain 273 327 2.2E-10 T 25-04-2017 CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 Gene3D G3DSA:3.30.70.20 254 285 2.5E-12 T 25-04-2017 CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 Pfam PF04060 Putative Fe-S cluster 46 78 8.9E-13 T 25-04-2017 IPR007202 4Fe-4S domain GO:0051536 CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 SUPERFAMILY SSF54862 144 195 3.53E-14 T 25-04-2017 CLFO_RS08435 0585dd1a56c28fa3d9d000441f9ea343 328 SUPERFAMILY SSF54862 42 111 3.53E-14 T 25-04-2017 CLFO_RS14620 0239163f84498765041b479aa5014e0e 120 Gene3D G3DSA:3.40.50.2300 2 119 8.9E-38 T 25-04-2017 CLFO_RS14620 0239163f84498765041b479aa5014e0e 120 SMART SM00448 3 116 2.1E-36 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS14620 0239163f84498765041b479aa5014e0e 120 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-25 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS14620 0239163f84498765041b479aa5014e0e 120 SUPERFAMILY SSF52172 3 120 3.98E-37 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS06980 9935b09a179ae9ee6d2eba281e5f6de5 108 Gene3D G3DSA:3.30.70.120 1 106 6.5E-32 T 25-04-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLFO_RS06980 9935b09a179ae9ee6d2eba281e5f6de5 108 PRINTS PR00340 P-II protein signature 2 17 1.3E-19 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS06980 9935b09a179ae9ee6d2eba281e5f6de5 108 PRINTS PR00340 P-II protein signature 23 41 1.3E-19 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS06980 9935b09a179ae9ee6d2eba281e5f6de5 108 PRINTS PR00340 P-II protein signature 82 102 1.3E-19 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS06980 9935b09a179ae9ee6d2eba281e5f6de5 108 SMART SM00938 4 104 1.1E-39 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS06980 9935b09a179ae9ee6d2eba281e5f6de5 108 SUPERFAMILY SSF54913 1 107 5.72E-29 T 25-04-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLFO_RS06980 9935b09a179ae9ee6d2eba281e5f6de5 108 Pfam PF00543 Nitrogen regulatory protein P-II 4 104 3.3E-26 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS09640 e43795a3a311c24028fdbd3d66ff1c12 355 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 127 1.5E-23 T 25-04-2017 IPR000587 Creatinase, N-terminal GO:0016787 CLFO_RS09640 e43795a3a311c24028fdbd3d66ff1c12 355 Pfam PF00557 Metallopeptidase family M24 135 336 7.4E-69 T 25-04-2017 IPR000994 Peptidase M24, structural domain CLFO_RS09640 e43795a3a311c24028fdbd3d66ff1c12 355 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 283 295 - T 25-04-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CLFO_RS09640 e43795a3a311c24028fdbd3d66ff1c12 355 Gene3D G3DSA:3.90.230.10 126 354 1.5E-86 T 25-04-2017 IPR000994 Peptidase M24, structural domain CLFO_RS09640 e43795a3a311c24028fdbd3d66ff1c12 355 SUPERFAMILY SSF55920 126 353 9.55E-81 T 25-04-2017 IPR000994 Peptidase M24, structural domain CLFO_RS09640 e43795a3a311c24028fdbd3d66ff1c12 355 PRINTS PR00599 Methionine aminopeptidase-1 signature 305 317 5.0E-8 T 25-04-2017 IPR001714 Peptidase M24, methionine aminopeptidase CLFO_RS09640 e43795a3a311c24028fdbd3d66ff1c12 355 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 5.0E-8 T 25-04-2017 IPR001714 Peptidase M24, methionine aminopeptidase CLFO_RS09640 e43795a3a311c24028fdbd3d66ff1c12 355 PRINTS PR00599 Methionine aminopeptidase-1 signature 274 286 5.0E-8 T 25-04-2017 IPR001714 Peptidase M24, methionine aminopeptidase CLFO_RS09640 e43795a3a311c24028fdbd3d66ff1c12 355 Gene3D G3DSA:3.40.350.10 1 125 4.5E-30 T 25-04-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLFO_RS09640 e43795a3a311c24028fdbd3d66ff1c12 355 SUPERFAMILY SSF53092 8 127 1.92E-24 T 25-04-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLFO_RS03335 4be8529e6197d519a01ae27151689084 143 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 10 133 1.3E-44 T 25-04-2017 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CLFO_RS03335 4be8529e6197d519a01ae27151689084 143 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 11 133 6.5E-29 T 25-04-2017 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CLFO_RS03335 4be8529e6197d519a01ae27151689084 143 SUPERFAMILY SSF81593 4 132 2.63E-45 T 25-04-2017 CLFO_RS03335 4be8529e6197d519a01ae27151689084 143 Gene3D G3DSA:1.20.120.330 5 135 1.1E-52 T 25-04-2017 CLFO_RS16860 dd7918da20cd59a5682177abc8ac90f8 409 Gene3D G3DSA:1.20.1250.20 2 188 3.5E-24 T 25-04-2017 CLFO_RS16860 dd7918da20cd59a5682177abc8ac90f8 409 Pfam PF07690 Major Facilitator Superfamily 10 363 1.2E-24 T 25-04-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLFO_RS16860 dd7918da20cd59a5682177abc8ac90f8 409 Gene3D G3DSA:1.20.1250.20 215 398 1.4E-9 T 25-04-2017 CLFO_RS16860 dd7918da20cd59a5682177abc8ac90f8 409 SUPERFAMILY SSF103473 2 400 3.79E-41 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS03960 d5e8c8a0149c8da31394b5d1ebcbbe66 310 SUPERFAMILY SSF46785 2 54 7.52E-10 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03960 d5e8c8a0149c8da31394b5d1ebcbbe66 310 Pfam PF08279 HTH domain 5 54 4.8E-12 T 25-04-2017 IPR013196 Helix-turn-helix, type 11 CLFO_RS03960 d5e8c8a0149c8da31394b5d1ebcbbe66 310 Gene3D G3DSA:1.10.10.10 4 57 1.5E-11 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03960 d5e8c8a0149c8da31394b5d1ebcbbe66 310 PIRSF PIRSF016838 1 310 5.9E-27 T 25-04-2017 IPR028349 Protein PafC CLFO_RS03960 d5e8c8a0149c8da31394b5d1ebcbbe66 310 Pfam PF13280 WYL domain 142 305 1.8E-34 T 25-04-2017 IPR026881 WYL domain CLFO_RS05225 025c7ae7bd7aacd3897e885fab3c4aa6 395 Gene3D G3DSA:3.40.640.10 61 277 3.2E-93 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS05225 025c7ae7bd7aacd3897e885fab3c4aa6 395 Pfam PF00155 Aminotransferase class I and II 42 383 7.6E-67 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS05225 025c7ae7bd7aacd3897e885fab3c4aa6 395 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 385 1.5E-133 T 25-04-2017 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CLFO_RS05225 025c7ae7bd7aacd3897e885fab3c4aa6 395 Gene3D G3DSA:3.90.1150.10 278 391 1.1E-31 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS05225 025c7ae7bd7aacd3897e885fab3c4aa6 395 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 10 395 4.7E-181 T 25-04-2017 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type CLFO_RS05225 025c7ae7bd7aacd3897e885fab3c4aa6 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 25-04-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CLFO_RS05225 025c7ae7bd7aacd3897e885fab3c4aa6 395 SUPERFAMILY SSF53383 7 393 2.99E-118 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 322 37.994 T 25-04-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 159 4.5E-53 T 25-04-2017 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 9.5E-48 T 25-04-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 9.5E-48 T 25-04-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 9.5E-48 T 25-04-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 9.5E-48 T 25-04-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 9.5E-48 T 25-04-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 9.5E-48 T 25-04-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 25-04-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 SUPERFAMILY SSF48179 180 332 7.99E-59 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 Gene3D G3DSA:3.40.50.720 1 183 6.2E-64 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 PIRSF PIRSF000114 1 332 7.6E-113 T 25-04-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 320 2.2E-54 T 25-04-2017 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 SUPERFAMILY SSF51735 5 178 6.04E-56 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS11605 a75ada8dd92bddb79a197f31a47bfc68 344 Gene3D G3DSA:1.10.1040.10 184 326 1.9E-59 T 25-04-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLFO_RS10085 fb206794beca728bdcd6160fd7e745ba 308 Gene3D G3DSA:3.80.30.10 129 305 2.9E-63 T 25-04-2017 CLFO_RS10085 fb206794beca728bdcd6160fd7e745ba 308 Gene3D G3DSA:3.30.70.20 42 121 3.5E-13 T 25-04-2017 CLFO_RS10085 fb206794beca728bdcd6160fd7e745ba 308 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 12 296 2.5E-117 T 25-04-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLFO_RS10085 fb206794beca728bdcd6160fd7e745ba 308 Pfam PF04055 Radical SAM superfamily 29 235 2.0E-28 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS10085 fb206794beca728bdcd6160fd7e745ba 308 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 25-04-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLFO_RS10085 fb206794beca728bdcd6160fd7e745ba 308 PIRSF PIRSF000371 1 306 1.1E-108 T 25-04-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLFO_RS10085 fb206794beca728bdcd6160fd7e745ba 308 SUPERFAMILY SSF102114 99 267 4.05E-19 T 25-04-2017 CLFO_RS10085 fb206794beca728bdcd6160fd7e745ba 308 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS10085 fb206794beca728bdcd6160fd7e745ba 308 Pfam PF13353 4Fe-4S single cluster domain 22 197 9.9E-14 T 25-04-2017 CLFO_RS10085 fb206794beca728bdcd6160fd7e745ba 308 SUPERFAMILY SSF54862 10 149 3.22E-21 T 25-04-2017 CLFO_RS08940 80a596b280c1d93e84edfe19ea83bc88 91 PRINTS PR01853 Bacterial YajC preprotein translocase signature 42 60 6.5E-13 T 25-04-2017 IPR003849 Preprotein translocase YajC CLFO_RS08940 80a596b280c1d93e84edfe19ea83bc88 91 PRINTS PR01853 Bacterial YajC preprotein translocase signature 4 24 6.5E-13 T 25-04-2017 IPR003849 Preprotein translocase YajC CLFO_RS08940 80a596b280c1d93e84edfe19ea83bc88 91 SMART SM01323 2 85 2.3E-38 T 25-04-2017 IPR003849 Preprotein translocase YajC CLFO_RS08940 80a596b280c1d93e84edfe19ea83bc88 91 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 9 85 5.0E-26 T 25-04-2017 IPR003849 Preprotein translocase YajC CLFO_RS08940 80a596b280c1d93e84edfe19ea83bc88 91 Pfam PF02699 Preprotein translocase subunit 8 82 1.3E-29 T 25-04-2017 IPR003849 Preprotein translocase YajC CLFO_RS10925 f735e5699e9d1b6424cfe433ca4e2e36 382 Gene3D G3DSA:3.40.50.720 2 148 5.7E-55 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS10925 f735e5699e9d1b6424cfe433ca4e2e36 382 PIRSF PIRSF006205 2 381 8.7E-159 T 25-04-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CLFO_RS10925 f735e5699e9d1b6424cfe433ca4e2e36 382 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 227 3.1E-41 T 25-04-2017 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CLFO_RS10925 f735e5699e9d1b6424cfe433ca4e2e36 382 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 375 4.1E-41 T 25-04-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CLFO_RS10925 f735e5699e9d1b6424cfe433ca4e2e36 382 SUPERFAMILY SSF51735 3 148 2.56E-41 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS10925 f735e5699e9d1b6424cfe433ca4e2e36 382 Gene3D G3DSA:1.10.1740.10 301 378 1.4E-26 T 25-04-2017 CLFO_RS10925 f735e5699e9d1b6424cfe433ca4e2e36 382 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 379 9.7E-155 T 25-04-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CLFO_RS10925 f735e5699e9d1b6424cfe433ca4e2e36 382 SUPERFAMILY SSF55347 124 262 2.75E-61 T 25-04-2017 CLFO_RS10925 f735e5699e9d1b6424cfe433ca4e2e36 382 SUPERFAMILY SSF69055 290 379 2.09E-30 T 25-04-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CLFO_RS10925 f735e5699e9d1b6424cfe433ca4e2e36 382 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 380 46.689 T 25-04-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CLFO_RS10925 f735e5699e9d1b6424cfe433ca4e2e36 382 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 130 1.3E-43 T 25-04-2017 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CLFO_RS01670 b0ca89e222d7865a04b1115a73fcfe18 179 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 119 173 1.2E-29 T 25-04-2017 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal CLFO_RS01670 b0ca89e222d7865a04b1115a73fcfe18 179 Gene3D G3DSA:3.30.160.100 1 94 2.9E-34 T 25-04-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CLFO_RS01670 b0ca89e222d7865a04b1115a73fcfe18 179 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 2.0E-28 T 25-04-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CLFO_RS01670 b0ca89e222d7865a04b1115a73fcfe18 179 SUPERFAMILY SSF69754 1 101 2.75E-32 T 25-04-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CLFO_RS01670 b0ca89e222d7865a04b1115a73fcfe18 179 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 2.2E-28 T 25-04-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 Gene3D G3DSA:3.40.1190.10 479 713 7.5E-38 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 SUPERFAMILY SSF56059 380 475 1.94E-37 T 25-04-2017 CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 SUPERFAMILY SSF56059 214 344 1.94E-37 T 25-04-2017 CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 Gene3D G3DSA:3.90.190.20 723 849 6.2E-24 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 SUPERFAMILY SSF53623 443 734 1.44E-44 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 Pfam PF08443 RimK-like ATP-grasp domain 386 468 1.1E-5 T 25-04-2017 IPR013651 ATP-grasp fold, RimK-type CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 Pfam PF08443 RimK-like ATP-grasp domain 213 317 8.0E-9 T 25-04-2017 IPR013651 ATP-grasp fold, RimK-type CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 Gene3D G3DSA:3.30.470.20 208 335 1.7E-31 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 Gene3D G3DSA:3.30.470.20 393 474 1.7E-31 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 Pfam PF08245 Mur ligase middle domain 485 696 4.3E-29 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 864 0.0 T 25-04-2017 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 SUPERFAMILY SSF53244 721 849 4.94E-25 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS03620 573732a9ba190ba051a5ad2a6ec5ebb6 884 Pfam PF02875 Mur ligase family, glutamate ligase domain 721 794 1.6E-10 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS14660 424f059a8424af202a0a399d75997258 584 Pfam PF11738 Protein of unknown function (DUF3298) 492 567 8.9E-21 T 25-04-2017 IPR021729 Domain of unknown function DUF3298 CLFO_RS14660 424f059a8424af202a0a399d75997258 584 Gene3D G3DSA:3.30.565.40 396 488 1.1E-12 T 25-04-2017 IPR025303 Domain of unknown function DUF4163 CLFO_RS14660 424f059a8424af202a0a399d75997258 584 Gene3D G3DSA:3.90.640.20 492 580 5.4E-24 T 25-04-2017 IPR021729 Domain of unknown function DUF3298 CLFO_RS14660 424f059a8424af202a0a399d75997258 584 Pfam PF14903 WG containing repeat 297 323 0.23 T 25-04-2017 IPR032774 WG containing repeat CLFO_RS14660 424f059a8424af202a0a399d75997258 584 Pfam PF14903 WG containing repeat 70 97 0.032 T 25-04-2017 IPR032774 WG containing repeat CLFO_RS14660 424f059a8424af202a0a399d75997258 584 Pfam PF14903 WG containing repeat 251 280 1.6E-6 T 25-04-2017 IPR032774 WG containing repeat CLFO_RS14660 424f059a8424af202a0a399d75997258 584 Pfam PF14903 WG containing repeat 177 207 0.23 T 25-04-2017 IPR032774 WG containing repeat CLFO_RS14660 424f059a8424af202a0a399d75997258 584 Pfam PF14903 WG containing repeat 142 172 1.1E-6 T 25-04-2017 IPR032774 WG containing repeat CLFO_RS14660 424f059a8424af202a0a399d75997258 584 Pfam PF14903 WG containing repeat 34 67 9.4E-10 T 25-04-2017 IPR032774 WG containing repeat CLFO_RS14660 424f059a8424af202a0a399d75997258 584 Pfam PF14903 WG containing repeat 213 236 1.9E-6 T 25-04-2017 IPR032774 WG containing repeat CLFO_RS04295 ceaa69b06af30b9ac8b1e68b88846826 491 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 45 487 6.9E-152 T 25-04-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CLFO_RS04295 ceaa69b06af30b9ac8b1e68b88846826 491 ProSitePatterns PS01303 BCCT family of transporters signature. 309 318 - T 25-04-2017 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 CLFO_RS04295 ceaa69b06af30b9ac8b1e68b88846826 491 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 7 486 1.9E-186 T 25-04-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CLFO_RS19565 0ed2d57074ca7bbe4151962b2f8de36e 207 Pfam PF01479 S4 domain 99 145 3.9E-22 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS19565 0ed2d57074ca7bbe4151962b2f8de36e 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 1.0E-73 T 25-04-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLFO_RS19565 0ed2d57074ca7bbe4151962b2f8de36e 207 SMART SM01390 3 97 2.4E-55 T 25-04-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CLFO_RS19565 0ed2d57074ca7bbe4151962b2f8de36e 207 SUPERFAMILY SSF55174 2 207 3.79E-69 T 25-04-2017 CLFO_RS19565 0ed2d57074ca7bbe4151962b2f8de36e 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 35.749 T 25-04-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLFO_RS19565 0ed2d57074ca7bbe4151962b2f8de36e 207 Gene3D G3DSA:1.10.1050.10 1 100 5.8E-44 T 25-04-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CLFO_RS19565 0ed2d57074ca7bbe4151962b2f8de36e 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 25-04-2017 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19565 0ed2d57074ca7bbe4151962b2f8de36e 207 SMART SM00363 98 163 1.1E-19 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS19565 0ed2d57074ca7bbe4151962b2f8de36e 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 4.0E-28 T 25-04-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CLFO_RS19565 0ed2d57074ca7bbe4151962b2f8de36e 207 Gene3D G3DSA:3.10.290.10 101 198 4.0E-30 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS12345 e9e737ae5453ec6444c8b6fe0838cf76 408 Pfam PF00155 Aminotransferase class I and II 68 390 1.2E-31 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS12345 e9e737ae5453ec6444c8b6fe0838cf76 408 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 394 1.3E-110 T 25-04-2017 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CLFO_RS12345 e9e737ae5453ec6444c8b6fe0838cf76 408 SUPERFAMILY SSF53383 32 395 5.24E-88 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS12345 e9e737ae5453ec6444c8b6fe0838cf76 408 Gene3D G3DSA:3.40.640.10 53 260 1.2E-46 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS12345 e9e737ae5453ec6444c8b6fe0838cf76 408 Gene3D G3DSA:3.90.1150.10 261 395 1.0E-33 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS19510 30232f544c4bffaa81633f0a0732ee10 238 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 47 231 5.1E-50 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS19510 30232f544c4bffaa81633f0a0732ee10 238 SUPERFAMILY SSF53187 45 234 2.42E-52 T 25-04-2017 CLFO_RS19510 30232f544c4bffaa81633f0a0732ee10 238 Gene3D G3DSA:3.40.630.40 45 234 1.4E-56 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS19510 30232f544c4bffaa81633f0a0732ee10 238 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 45 233 3.3E-72 T 25-04-2017 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD CLFO_RS19510 30232f544c4bffaa81633f0a0732ee10 238 SMART SM00646 119 231 2.0E-22 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS08905 df39bcb397dc442908571d6b63cbe072 164 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 151 2.2E-54 T 25-04-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CLFO_RS08905 df39bcb397dc442908571d6b63cbe072 164 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 148 - T 25-04-2017 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CLFO_RS08905 df39bcb397dc442908571d6b63cbe072 164 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 46.415 T 25-04-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CLFO_RS08905 df39bcb397dc442908571d6b63cbe072 164 Gene3D G3DSA:3.30.420.10 1 156 4.6E-66 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS08905 df39bcb397dc442908571d6b63cbe072 164 SUPERFAMILY SSF53098 1 156 5.69E-52 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS08905 df39bcb397dc442908571d6b63cbe072 164 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 1.7E-50 T 25-04-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CLFO_RS08905 df39bcb397dc442908571d6b63cbe072 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.6E-35 T 25-04-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CLFO_RS08905 df39bcb397dc442908571d6b63cbe072 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.6E-35 T 25-04-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CLFO_RS08905 df39bcb397dc442908571d6b63cbe072 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 2.6E-35 T 25-04-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CLFO_RS08905 df39bcb397dc442908571d6b63cbe072 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.6E-35 T 25-04-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CLFO_RS08905 df39bcb397dc442908571d6b63cbe072 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.6E-35 T 25-04-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 SUPERFAMILY SSF56601 170 268 5.09E-104 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 SUPERFAMILY SSF56601 298 588 5.09E-104 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 Pfam PF03793 PASTA domain 598 657 7.4E-6 T 25-04-2017 IPR005543 PASTA domain CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 Pfam PF03793 PASTA domain 667 719 4.2E-7 T 25-04-2017 IPR005543 PASTA domain CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 SUPERFAMILY SSF56519 51 218 3.53E-39 T 25-04-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 Pfam PF00905 Penicillin binding protein transpeptidase domain 245 573 5.7E-81 T 25-04-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 Gene3D G3DSA:3.40.710.10 226 583 1.8E-108 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 12 657 1.4E-208 T 25-04-2017 IPR011927 Stage V sporulation protein D CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 Gene3D G3DSA:3.90.1310.10 125 225 5.5E-26 T 25-04-2017 CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 SMART SM00740 663 722 7.4E-5 T 25-04-2017 IPR005543 PASTA domain CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 SMART SM00740 594 659 9.7E-4 T 25-04-2017 IPR005543 PASTA domain CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 SUPERFAMILY SSF54184 667 720 5.1E-9 T 25-04-2017 CLFO_RS11755 12c63bc51bc2eed4bc29955a24263327 723 Pfam PF03717 Penicillin-binding Protein dimerisation domain 55 200 5.0E-18 T 25-04-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLFO_RS10935 d18213f751da6ff86f98860661a5361e 246 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 17 245 41.025 T 25-04-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CLFO_RS10935 d18213f751da6ff86f98860661a5361e 246 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 17 244 5.5E-93 T 25-04-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CLFO_RS10935 d18213f751da6ff86f98860661a5361e 246 SUPERFAMILY SSF64005 13 239 2.09E-90 T 25-04-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CLFO_RS10935 d18213f751da6ff86f98860661a5361e 246 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 190 207 - T 25-04-2017 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 CLFO_RS10935 d18213f751da6ff86f98860661a5361e 246 Gene3D G3DSA:3.40.1180.10 12 245 4.8E-101 T 25-04-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CLFO_RS10935 d18213f751da6ff86f98860661a5361e 246 Pfam PF01255 Putative undecaprenyl diphosphate synthase 24 244 5.4E-85 T 25-04-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CLFO_RS00405 093bbc0c16ea6346dc1901f4f9bd300e 285 PIRSF PIRSF005917 1 285 7.2E-104 T 25-04-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS00405 093bbc0c16ea6346dc1901f4f9bd300e 285 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 9 227 37.623 T 25-04-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS00405 093bbc0c16ea6346dc1901f4f9bd300e 285 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 208 4.8E-27 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00405 093bbc0c16ea6346dc1901f4f9bd300e 285 Gene3D G3DSA:3.40.1010.10 8 117 8.6E-16 T 25-04-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00405 093bbc0c16ea6346dc1901f4f9bd300e 285 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 87 98 - T 25-04-2017 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS00405 093bbc0c16ea6346dc1901f4f9bd300e 285 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 10 281 4.5E-85 T 25-04-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS00405 093bbc0c16ea6346dc1901f4f9bd300e 285 Gene3D G3DSA:3.30.950.10 118 227 4.6E-42 T 25-04-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00405 093bbc0c16ea6346dc1901f4f9bd300e 285 SUPERFAMILY SSF53790 7 225 2.36E-84 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS14535 af1f3619af39e7533fe67b87a5aeffde 623 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 424 622 8.2E-17 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS14535 af1f3619af39e7533fe67b87a5aeffde 623 Gene3D G3DSA:3.30.450.20 196 317 2.3E-11 T 25-04-2017 CLFO_RS14535 af1f3619af39e7533fe67b87a5aeffde 623 SMART SM00331 399 622 0.0044 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS14535 af1f3619af39e7533fe67b87a5aeffde 623 Pfam PF02743 Cache domain 58 301 4.9E-15 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS04625 cb73c0436887d053146831dc1a43ea10 136 Gene3D G3DSA:1.20.120.50 2 127 2.7E-27 T 25-04-2017 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CLFO_RS04625 cb73c0436887d053146831dc1a43ea10 136 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 127 3.5E-28 T 25-04-2017 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CLFO_RS04625 cb73c0436887d053146831dc1a43ea10 136 ProSitePatterns PS00550 Hemerythrin family signature. 55 78 - T 25-04-2017 IPR016131 Haemerythrin, iron-binding site GO:0046872 CLFO_RS04625 cb73c0436887d053146831dc1a43ea10 136 SUPERFAMILY SSF47188 1 127 2.09E-26 T 25-04-2017 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CLFO_RS04625 cb73c0436887d053146831dc1a43ea10 136 Pfam PF01814 Hemerythrin HHE cation binding domain 14 124 1.0E-9 T 25-04-2017 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 CLFO_RS17525 85ea67dad863735b3db533cdc7d03ca5 386 Gene3D G3DSA:3.20.20.210 185 382 2.3E-14 T 25-04-2017 CLFO_RS17525 85ea67dad863735b3db533cdc7d03ca5 386 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 245 380 1.7E-6 T 25-04-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CLFO_RS17525 85ea67dad863735b3db533cdc7d03ca5 386 SUPERFAMILY SSF51726 11 382 1.36E-35 T 25-04-2017 CLFO_RS17445 6a21e9ae300dbdd4455faf5074c93161 376 Pfam PF01336 OB-fold nucleic acid binding domain 227 296 1.0E-6 T 25-04-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLFO_RS17445 6a21e9ae300dbdd4455faf5074c93161 376 Gene3D G3DSA:2.40.50.140 212 295 1.6E-5 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS17445 6a21e9ae300dbdd4455faf5074c93161 376 Pfam PF14579 Helix-hairpin-helix motif 26 115 2.4E-29 T 25-04-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS17445 6a21e9ae300dbdd4455faf5074c93161 376 Gene3D G3DSA:1.10.150.280 52 99 3.4E-4 T 25-04-2017 CLFO_RS15655 ca65ed49092fa5311ce0e411eace4950 497 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 224 238 - T 25-04-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CLFO_RS15655 ca65ed49092fa5311ce0e411eace4950 497 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 416 467 1.1E-9 T 25-04-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLFO_RS15655 ca65ed49092fa5311ce0e411eace4950 497 Gene3D G3DSA:3.90.100.10 401 494 1.0E-28 T 25-04-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLFO_RS15655 ca65ed49092fa5311ce0e411eace4950 497 Gene3D G3DSA:3.40.640.10 9 285 1.2E-107 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS15655 ca65ed49092fa5311ce0e411eace4950 497 Gene3D G3DSA:3.90.1150.10 318 392 5.4E-15 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS15655 ca65ed49092fa5311ce0e411eace4950 497 SUPERFAMILY SSF53383 9 387 3.32E-96 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS15655 ca65ed49092fa5311ce0e411eace4950 497 SUPERFAMILY SSF55904 345 494 5.1E-36 T 25-04-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLFO_RS15655 ca65ed49092fa5311ce0e411eace4950 497 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 9 374 2.2E-98 T 25-04-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CLFO_RS12950 180a11a8fd1b223b8a5977747ae2d42a 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 6.4E-18 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS12950 180a11a8fd1b223b8a5977747ae2d42a 228 SMART SM00345 16 74 8.7E-17 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS12950 180a11a8fd1b223b8a5977747ae2d42a 228 SUPERFAMILY SSF48008 82 215 4.18E-17 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS12950 180a11a8fd1b223b8a5977747ae2d42a 228 SMART SM00895 84 210 1.1E-6 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS12950 180a11a8fd1b223b8a5977747ae2d42a 228 Pfam PF07729 FCD domain 84 209 1.0E-17 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS12950 180a11a8fd1b223b8a5977747ae2d42a 228 SUPERFAMILY SSF46785 13 83 2.21E-16 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12950 180a11a8fd1b223b8a5977747ae2d42a 228 Gene3D G3DSA:1.10.10.10 8 75 5.9E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12950 180a11a8fd1b223b8a5977747ae2d42a 228 Gene3D G3DSA:1.20.120.530 78 218 5.3E-20 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS18575 2d43cd676b5443b4af4ea402bc4644ca 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 1.0E-16 T 25-04-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain CLFO_RS18575 2d43cd676b5443b4af4ea402bc4644ca 95 Gene3D G3DSA:3.30.70.900 1 94 1.3E-25 T 25-04-2017 CLFO_RS18575 2d43cd676b5443b4af4ea402bc4644ca 95 SUPERFAMILY SSF54909 1 93 1.11E-23 T 25-04-2017 IPR011008 Dimeric alpha-beta barrel CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 Gene3D G3DSA:3.40.50.970 791 1167 1.5E-155 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 Gene3D G3DSA:3.40.50.920 259 412 2.0E-64 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 Gene3D G3DSA:3.40.920.10 416 621 3.3E-91 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 PIRSF PIRSF000159 1 1168 0.0 T 25-04-2017 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 SMART SM00890 620 679 2.2E-31 T 25-04-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 Gene3D G3DSA:4.10.780.10 632 668 9.1E-19 T 25-04-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1167 0.0 T 25-04-2017 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 SUPERFAMILY SSF52518 3 258 4.41E-80 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 958 1067 6.5E-10 T 25-04-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 Pfam PF12838 4Fe-4S dicluster domain 689 758 1.2E-9 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 Gene3D G3DSA:3.30.70.20 672 781 6.5E-22 T 25-04-2017 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 SUPERFAMILY SSF53323 415 668 1.96E-91 T 25-04-2017 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 609 3.4E-33 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 372 2.8E-15 T 25-04-2017 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 SUPERFAMILY SSF52518 789 1166 3.07E-138 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 18 248 4.7E-81 T 25-04-2017 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 SUPERFAMILY SSF54862 665 832 1.33E-22 T 25-04-2017 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 Pfam PF10371 Domain of unknown function 629 678 9.0E-25 T 25-04-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 SUPERFAMILY SSF52922 259 411 1.86E-49 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS20375 9d1aee197fff05e6f55326b4c559d6a2 1168 Gene3D G3DSA:3.40.50.970 3 258 6.4E-115 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Pfam PF04560 RNA polymerase Rpb2, domain 7 1084 1159 2.3E-27 T 25-04-2017 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 SUPERFAMILY SSF64484 12 285 0.0 T 25-04-2017 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 SUPERFAMILY SSF64484 398 1169 0.0 T 25-04-2017 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Gene3D G3DSA:2.40.270.10 932 1060 4.3E-80 T 25-04-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Gene3D G3DSA:2.40.270.10 765 792 4.3E-80 T 25-04-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Pfam PF04561 RNA polymerase Rpb2, domain 2 139 287 8.6E-23 T 25-04-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Pfam PF04561 RNA polymerase Rpb2, domain 2 399 430 1.2E-6 T 25-04-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Gene3D G3DSA:3.90.1110.10 396 420 5.1E-71 T 25-04-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Gene3D G3DSA:3.90.1110.10 141 294 5.1E-71 T 25-04-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Gene3D G3DSA:3.90.1100.10 421 567 4.6E-151 T 25-04-2017 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Gene3D G3DSA:3.90.1100.10 638 692 4.6E-151 T 25-04-2017 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Gene3D G3DSA:3.90.1100.10 19 139 4.6E-151 T 25-04-2017 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 ProSitePatterns PS01166 RNA polymerases beta chain signature. 935 947 - T 25-04-2017 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Gene3D G3DSA:2.40.50.100 693 764 5.6E-32 T 25-04-2017 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Pfam PF10385 RNA polymerase beta subunit external 1 domain 567 635 1.1E-24 T 25-04-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Gene3D G3DSA:2.40.50.150 800 931 5.2E-60 T 25-04-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Gene3D G3DSA:2.30.150.10 568 635 4.6E-24 T 25-04-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Pfam PF04565 RNA polymerase Rpb2, domain 3 489 557 4.6E-31 T 25-04-2017 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Pfam PF04563 RNA polymerase beta subunit 27 475 8.8E-27 T 25-04-2017 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1160 12.652 T 25-04-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 Pfam PF00562 RNA polymerase Rpb2, domain 6 696 1082 1.3E-173 T 25-04-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS19745 7c51ca61a9e27e452677470d6dc835bf 1254 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 212 909 0.0 T 25-04-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS04320 c78da5a448dcd1b2e605f5b3e557dcd7 320 Gene3D G3DSA:3.30.420.40 100 239 2.9E-50 T 25-04-2017 CLFO_RS04320 c78da5a448dcd1b2e605f5b3e557dcd7 320 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 5 256 3.6E-56 T 25-04-2017 IPR008275 CoA enzyme activase CLFO_RS04320 c78da5a448dcd1b2e605f5b3e557dcd7 320 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 257 2.8E-42 T 25-04-2017 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLFO_RS04320 c78da5a448dcd1b2e605f5b3e557dcd7 320 Gene3D G3DSA:3.30.420.40 3 66 8.8E-5 T 25-04-2017 CLFO_RS04320 c78da5a448dcd1b2e605f5b3e557dcd7 320 SUPERFAMILY SSF53067 4 257 4.58E-41 T 25-04-2017 CLFO_RS02320 97c54b3481e7ebf8e506fc9431ee91a9 726 Gene3D G3DSA:3.40.50.300 547 635 2.0E-71 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02320 97c54b3481e7ebf8e506fc9431ee91a9 726 Gene3D G3DSA:3.40.50.300 285 385 2.0E-71 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02320 97c54b3481e7ebf8e506fc9431ee91a9 726 Gene3D G3DSA:1.10.10.160 110 189 1.1E-22 T 25-04-2017 IPR013986 DExx box DNA helicase domain CLFO_RS02320 97c54b3481e7ebf8e506fc9431ee91a9 726 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 3 721 2.5E-295 T 25-04-2017 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 CLFO_RS02320 97c54b3481e7ebf8e506fc9431ee91a9 726 Pfam PF13361 UvrD-like helicase C-terminal domain 275 608 6.2E-78 T 25-04-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CLFO_RS02320 97c54b3481e7ebf8e506fc9431ee91a9 726 Gene3D G3DSA:1.10.486.10 386 536 7.7E-48 T 25-04-2017 CLFO_RS02320 97c54b3481e7ebf8e506fc9431ee91a9 726 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 270 1.8E-85 T 25-04-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CLFO_RS02320 97c54b3481e7ebf8e506fc9431ee91a9 726 SUPERFAMILY SSF52540 3 635 1.18E-184 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02320 97c54b3481e7ebf8e506fc9431ee91a9 726 Pfam PF12073 Protein of unknown function (DUF3553) 682 725 1.4E-6 T 25-04-2017 IPR021938 Protein of unknown function DUF3553 CLFO_RS02320 97c54b3481e7ebf8e506fc9431ee91a9 726 Gene3D G3DSA:3.40.50.300 190 284 1.7E-75 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02320 97c54b3481e7ebf8e506fc9431ee91a9 726 Gene3D G3DSA:3.40.50.300 3 107 1.7E-75 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13085 dfe6dd4d5159e33e506980b6dd976c27 147 SMART SM00530 13 67 6.0E-4 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS13085 dfe6dd4d5159e33e506980b6dd976c27 147 SUPERFAMILY SSF47413 8 65 4.56E-10 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS13085 dfe6dd4d5159e33e506980b6dd976c27 147 Gene3D G3DSA:1.10.260.40 4 61 5.8E-10 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS13085 dfe6dd4d5159e33e506980b6dd976c27 147 Pfam PF01381 Helix-turn-helix 14 47 2.4E-6 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS04770 a6eea2afe7b886f286c525d83ed701e2 1254 SUPERFAMILY SSF52777 989 1228 1.78E-28 T 25-04-2017 CLFO_RS04770 a6eea2afe7b886f286c525d83ed701e2 1254 SUPERFAMILY SSF52777 503 753 8.78E-33 T 25-04-2017 CLFO_RS04770 a6eea2afe7b886f286c525d83ed701e2 1254 Pfam PF08415 Nonribosomal peptide synthase 644 703 2.8E-11 T 25-04-2017 IPR013624 Non-ribosomal peptide synthetase CLFO_RS04770 a6eea2afe7b886f286c525d83ed701e2 1254 Pfam PF08415 Nonribosomal peptide synthase 1124 1156 4.0E-5 T 25-04-2017 IPR013624 Non-ribosomal peptide synthetase CLFO_RS04770 a6eea2afe7b886f286c525d83ed701e2 1254 Pfam PF00550 Phosphopantetheine attachment site 206 267 9.6E-8 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04770 a6eea2afe7b886f286c525d83ed701e2 1254 SUPERFAMILY SSF47336 197 273 3.4E-11 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04770 a6eea2afe7b886f286c525d83ed701e2 1254 SMART SM00823 Phosphopantetheine attachment site 204 261 0.0031 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04770 a6eea2afe7b886f286c525d83ed701e2 1254 Pfam PF00668 Condensation domain 810 1095 1.6E-40 T 25-04-2017 IPR001242 Condensation domain CLFO_RS04770 a6eea2afe7b886f286c525d83ed701e2 1254 Pfam PF00668 Condensation domain 322 620 3.1E-38 T 25-04-2017 IPR001242 Condensation domain CLFO_RS04770 a6eea2afe7b886f286c525d83ed701e2 1254 SUPERFAMILY SSF52777 809 1001 7.89E-20 T 25-04-2017 CLFO_RS04770 a6eea2afe7b886f286c525d83ed701e2 1254 SUPERFAMILY SSF52777 320 516 1.01E-19 T 25-04-2017 CLFO_RS04770 a6eea2afe7b886f286c525d83ed701e2 1254 Gene3D G3DSA:1.10.1200.10 193 267 7.6E-10 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS12800 7c988a26934ec878d8ac6483a7b29d06 414 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 264 340 3.7E-16 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS12800 7c988a26934ec878d8ac6483a7b29d06 414 Pfam PF01385 Probable transposase 183 298 3.7E-13 T 25-04-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 CLFO_RS08510 a9281d62dc98c61599f9645f571c8428 612 Gene3D G3DSA:3.80.30.20 257 493 9.8E-46 T 25-04-2017 IPR023404 Radical SAM, alpha/beta horseshoe CLFO_RS08510 a9281d62dc98c61599f9645f571c8428 612 SMART SM00729 258 483 5.5E-35 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS08510 a9281d62dc98c61599f9645f571c8428 612 Pfam PF04055 Radical SAM superfamily 263 423 2.4E-16 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS08510 a9281d62dc98c61599f9645f571c8428 612 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 8 612 1.6E-299 T 25-04-2017 IPR023862 Conserved hypothetical protein CHP03960, radical SAM CLFO_RS08510 a9281d62dc98c61599f9645f571c8428 612 SUPERFAMILY SSF102114 226 594 1.44E-54 T 25-04-2017 CLFO_RS11550 b2c22aa4780d4204aca1da1be090c95d 101 Pfam PF01381 Helix-turn-helix 41 90 1.8E-16 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS11550 b2c22aa4780d4204aca1da1be090c95d 101 Gene3D G3DSA:1.10.260.40 32 93 3.7E-18 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS11550 b2c22aa4780d4204aca1da1be090c95d 101 SUPERFAMILY SSF47413 26 94 5.12E-19 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS11550 b2c22aa4780d4204aca1da1be090c95d 101 SMART SM00530 38 93 3.7E-14 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 35 45 - T 25-04-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 SUPERFAMILY SSF55424 335 454 7.9E-38 T 25-04-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 1.9E-38 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 1.9E-38 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 1.9E-38 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 1.9E-38 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.9E-38 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 SUPERFAMILY SSF51905 3 313 2.59E-65 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 319 3.5E-72 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 Gene3D G3DSA:3.30.390.30 326 454 4.7E-43 T 25-04-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 Gene3D G3DSA:3.50.50.60 2 138 7.1E-46 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 445 3.0E-32 T 25-04-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 3.3E-72 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 3.3E-72 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 34 49 3.3E-72 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 3.3E-72 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 398 413 3.3E-72 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 3.3E-72 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 3.3E-72 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 440 3.3E-72 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 3.3E-72 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 2 455 7.1E-169 T 25-04-2017 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 PIRSF PIRSF000350 1 454 1.4E-100 T 25-04-2017 CLFO_RS05620 e6dec52057a4a188e0e4c41e221d4589 457 Gene3D G3DSA:3.50.50.60 139 325 1.6E-56 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS05055 4f830d2fdfae534bdaf0a4c140a584ca 124 Hamap MF_00674 UPF0251 protein . 2 98 21.119 T 25-04-2017 IPR002852 Uncharacterised protein family UPF0251 CLFO_RS05055 4f830d2fdfae534bdaf0a4c140a584ca 124 Pfam PF02001 Protein of unknown function DUF134 2 95 3.5E-22 T 25-04-2017 IPR002852 Uncharacterised protein family UPF0251 CLFO_RS05055 4f830d2fdfae534bdaf0a4c140a584ca 124 Gene3D G3DSA:1.10.10.10 37 81 3.5E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS05055 4f830d2fdfae534bdaf0a4c140a584ca 124 SUPERFAMILY SSF88659 34 79 2.8E-6 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07050 8533d8b5a52efcc14500a0a3357defef 623 SUPERFAMILY SSF53649 229 537 8.5E-58 T 25-04-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLFO_RS07050 8533d8b5a52efcc14500a0a3357defef 623 Pfam PF00884 Sulfatase 230 518 2.9E-35 T 25-04-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CLFO_RS07050 8533d8b5a52efcc14500a0a3357defef 623 Gene3D G3DSA:3.40.720.10 230 536 3.5E-45 T 25-04-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLFO_RS07050 8533d8b5a52efcc14500a0a3357defef 623 PIRSF PIRSF005091 5 613 2.6E-144 T 25-04-2017 IPR012160 Lipoteichoic acid synthase-like CLFO_RS16590 a3da998118f55d0bd746d3675aab7b89 407 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 293 389 1.9E-8 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16590 a3da998118f55d0bd746d3675aab7b89 407 SUPERFAMILY SSF55874 252 390 1.1E-16 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16590 a3da998118f55d0bd746d3675aab7b89 407 Gene3D G3DSA:3.30.565.10 246 391 1.6E-17 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16590 a3da998118f55d0bd746d3675aab7b89 407 SMART SM00387 289 393 1.4E-5 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16590 a3da998118f55d0bd746d3675aab7b89 407 Pfam PF06580 Histidine kinase 197 274 1.5E-20 T 25-04-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLFO_RS16590 a3da998118f55d0bd746d3675aab7b89 407 Pfam PF10114 Sensory domain found in PocR 26 164 6.3E-8 T 25-04-2017 IPR018771 PocR domain CLFO_RS00260 75b59aad0c893aaaad8ba84a39a9fbd5 127 Gene3D G3DSA:3.40.50.1400 3 124 3.2E-33 T 25-04-2017 CLFO_RS00260 75b59aad0c893aaaad8ba84a39a9fbd5 127 SUPERFAMILY SSF53800 3 123 1.31E-28 T 25-04-2017 CLFO_RS00260 75b59aad0c893aaaad8ba84a39a9fbd5 127 Pfam PF01903 CbiX 10 117 5.8E-28 T 25-04-2017 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CLFO_RS13810 3493b8bd6a1c93c9322604850ff84cf3 249 Gene3D G3DSA:3.40.190.10 202 241 1.4E-17 T 25-04-2017 CLFO_RS13810 3493b8bd6a1c93c9322604850ff84cf3 249 Gene3D G3DSA:3.40.190.10 15 100 1.4E-17 T 25-04-2017 CLFO_RS13810 3493b8bd6a1c93c9322604850ff84cf3 249 PIRSF PIRSF004846 1 244 1.9E-61 T 25-04-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 CLFO_RS13810 3493b8bd6a1c93c9322604850ff84cf3 249 Gene3D G3DSA:3.40.190.10 101 201 2.8E-27 T 25-04-2017 CLFO_RS13810 3493b8bd6a1c93c9322604850ff84cf3 249 Pfam PF13531 Bacterial extracellular solute-binding protein 20 240 1.5E-40 T 25-04-2017 CLFO_RS13810 3493b8bd6a1c93c9322604850ff84cf3 249 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 23 239 4.8E-52 T 25-04-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 CLFO_RS13810 3493b8bd6a1c93c9322604850ff84cf3 249 SUPERFAMILY SSF53850 17 241 8.03E-55 T 25-04-2017 CLFO_RS03920 0639f4aa38c8bc27ccb019e7aa752300 346 SUPERFAMILY SSF51735 2 177 1.36E-50 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03920 0639f4aa38c8bc27ccb019e7aa752300 346 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 159 317 5.9E-30 T 25-04-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLFO_RS03920 0639f4aa38c8bc27ccb019e7aa752300 346 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 142 4.6E-31 T 25-04-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CLFO_RS03920 0639f4aa38c8bc27ccb019e7aa752300 346 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 340 43.734 T 25-04-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLFO_RS03920 0639f4aa38c8bc27ccb019e7aa752300 346 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 346 5.9E-140 T 25-04-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLFO_RS03920 0639f4aa38c8bc27ccb019e7aa752300 346 Gene3D G3DSA:3.40.50.720 1 158 7.5E-60 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03920 0639f4aa38c8bc27ccb019e7aa752300 346 Gene3D G3DSA:3.30.360.10 159 314 2.6E-63 T 25-04-2017 CLFO_RS03920 0639f4aa38c8bc27ccb019e7aa752300 346 SUPERFAMILY SSF55347 150 314 3.15E-57 T 25-04-2017 CLFO_RS03920 0639f4aa38c8bc27ccb019e7aa752300 346 SMART SM00859 3 142 3.0E-49 T 25-04-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CLFO_RS03920 0639f4aa38c8bc27ccb019e7aa752300 346 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 145 161 - T 25-04-2017 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLFO_RS02120 90e3e5e079ae058ead6ac5b035b64078 170 Gene3D G3DSA:3.40.30.10 89 168 7.9E-18 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS02120 90e3e5e079ae058ead6ac5b035b64078 170 SUPERFAMILY SSF52833 18 169 1.45E-50 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS02120 90e3e5e079ae058ead6ac5b035b64078 170 PIRSF PIRSF000216 3 170 9.4E-54 T 25-04-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS02120 90e3e5e079ae058ead6ac5b035b64078 170 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 26 169 1.0E-48 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.0E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 PRINTS PR00702 Acriflavin resistance protein family signature 326 349 5.0E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 PRINTS PR00702 Acriflavin resistance protein family signature 538 555 5.0E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 PRINTS PR00702 Acriflavin resistance protein family signature 353 374 5.0E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 PRINTS PR00702 Acriflavin resistance protein family signature 381 405 5.0E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.0E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 5.0E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 5.0E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 PRINTS PR00702 Acriflavin resistance protein family signature 434 457 5.0E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 SUPERFAMILY SSF82866 789 1011 1.05E-50 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 SUPERFAMILY SSF82693 41 134 1.36E-24 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 Gene3D G3DSA:3.30.2090.10 704 793 8.0E-10 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 SUPERFAMILY SSF82866 289 485 1.1E-43 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 Gene3D G3DSA:1.10.3850.10 796 1010 4.4E-60 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 SUPERFAMILY SSF82693 265 320 1.57E-13 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 SUPERFAMILY SSF82693 135 179 1.57E-13 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 Pfam PF00873 AcrB/AcrD/AcrF family 4 1009 6.6E-261 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 Gene3D G3DSA:1.20.1640.10 296 490 3.1E-54 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 SUPERFAMILY SSF82693 552 654 1.05E-13 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 Gene3D G3DSA:3.30.2090.10 180 262 1.0E-9 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 Gene3D G3DSA:3.30.70.1430 41 138 6.6E-28 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 Gene3D G3DSA:3.30.70.1320 267 295 1.7E-8 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 Gene3D G3DSA:3.30.70.1320 139 176 1.7E-8 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 Gene3D G3DSA:3.30.70.1430 553 653 7.4E-13 T 25-04-2017 CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 SUPERFAMILY SSF82714 181 261 1.44E-9 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS05235 5d0a7f1617c07d1bd11ecaa7dca1712c 1022 SUPERFAMILY SSF82714 705 790 1.14E-10 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS06555 4deb5ba2b38ddd3d329c416ae6fbc74a 381 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 331 374 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS06555 4deb5ba2b38ddd3d329c416ae6fbc74a 381 Gene3D G3DSA:1.10.10.60 274 330 9.6E-10 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS06555 4deb5ba2b38ddd3d329c416ae6fbc74a 381 Gene3D G3DSA:1.10.10.60 331 379 4.7E-16 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS06555 4deb5ba2b38ddd3d329c416ae6fbc74a 381 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 362 378 1.0E-7 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS06555 4deb5ba2b38ddd3d329c416ae6fbc74a 381 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 347 362 1.0E-7 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS06555 4deb5ba2b38ddd3d329c416ae6fbc74a 381 SMART SM00342 294 378 1.0E-29 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS06555 4deb5ba2b38ddd3d329c416ae6fbc74a 381 SUPERFAMILY SSF46689 330 379 8.96E-12 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS06555 4deb5ba2b38ddd3d329c416ae6fbc74a 381 Pfam PF12833 Helix-turn-helix domain 300 378 6.6E-23 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS06555 4deb5ba2b38ddd3d329c416ae6fbc74a 381 SUPERFAMILY SSF46689 277 328 2.06E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS17530 f3421790bc15beebdd8e9230e4590083 216 SMART SM01018 5 90 2.8E-20 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17530 f3421790bc15beebdd8e9230e4590083 216 SUPERFAMILY SSF47644 9 88 6.93E-18 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17530 f3421790bc15beebdd8e9230e4590083 216 Gene3D G3DSA:1.10.1240.10 11 81 3.3E-12 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17530 f3421790bc15beebdd8e9230e4590083 216 SUPERFAMILY SSF52242 77 216 3.66E-41 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS17530 f3421790bc15beebdd8e9230e4590083 216 Pfam PF02607 B12 binding domain 11 83 8.4E-14 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17530 f3421790bc15beebdd8e9230e4590083 216 Gene3D G3DSA:3.40.50.280 82 216 9.5E-47 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS17530 f3421790bc15beebdd8e9230e4590083 216 Pfam PF02310 B12 binding domain 96 198 9.9E-23 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS01830 b7c6b70b9ce1541ff5d4199d2c769243 233 SUPERFAMILY SSF53067 1 102 2.72E-29 T 25-04-2017 CLFO_RS01830 b7c6b70b9ce1541ff5d4199d2c769243 233 Gene3D G3DSA:3.30.420.40 118 192 9.1E-8 T 25-04-2017 CLFO_RS01830 b7c6b70b9ce1541ff5d4199d2c769243 233 Pfam PF00814 Glycoprotease family 32 227 2.2E-31 T 25-04-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS01830 b7c6b70b9ce1541ff5d4199d2c769243 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 219 9.0E-57 T 25-04-2017 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 CLFO_RS01830 b7c6b70b9ce1541ff5d4199d2c769243 233 Gene3D G3DSA:3.30.420.40 1 117 2.0E-40 T 25-04-2017 CLFO_RS01830 b7c6b70b9ce1541ff5d4199d2c769243 233 SUPERFAMILY SSF53067 109 217 8.67E-17 T 25-04-2017 CLFO_RS13125 978f1baf9f050b604bf6e0d098052262 539 Pfam PF00072 Response regulator receiver domain 4 115 4.1E-25 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13125 978f1baf9f050b604bf6e0d098052262 539 SMART SM00342 446 529 3.3E-24 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS13125 978f1baf9f050b604bf6e0d098052262 539 Pfam PF12833 Helix-turn-helix domain 452 529 5.1E-19 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS13125 978f1baf9f050b604bf6e0d098052262 539 SMART SM00448 2 117 1.3E-26 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13125 978f1baf9f050b604bf6e0d098052262 539 SUPERFAMILY SSF46689 430 480 2.69E-6 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS13125 978f1baf9f050b604bf6e0d098052262 539 SUPERFAMILY SSF46689 482 533 1.43E-10 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS13125 978f1baf9f050b604bf6e0d098052262 539 Gene3D G3DSA:1.10.10.60 425 482 1.8E-17 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS13125 978f1baf9f050b604bf6e0d098052262 539 Gene3D G3DSA:3.40.50.2300 2 129 4.3E-30 T 25-04-2017 CLFO_RS13125 978f1baf9f050b604bf6e0d098052262 539 SUPERFAMILY SSF52172 2 120 1.71E-28 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS13125 978f1baf9f050b604bf6e0d098052262 539 Gene3D G3DSA:1.10.10.60 483 531 1.0E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS20190 e6719e56bbf21fff9abbcb01926b8c14 216 Gene3D G3DSA:1.20.58.220 1 112 1.1E-34 T 25-04-2017 CLFO_RS20190 e6719e56bbf21fff9abbcb01926b8c14 216 PIRSF PIRSF003107 1 216 1.7E-75 T 25-04-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CLFO_RS20190 e6719e56bbf21fff9abbcb01926b8c14 216 Pfam PF01895 PhoU domain 16 103 5.5E-24 T 25-04-2017 IPR026022 PhoU domain CLFO_RS20190 e6719e56bbf21fff9abbcb01926b8c14 216 Pfam PF01895 PhoU domain 120 204 2.9E-22 T 25-04-2017 IPR026022 PhoU domain CLFO_RS20190 e6719e56bbf21fff9abbcb01926b8c14 216 SUPERFAMILY SSF109755 3 215 2.09E-72 T 25-04-2017 CLFO_RS20190 e6719e56bbf21fff9abbcb01926b8c14 216 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 213 1.8E-69 T 25-04-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CLFO_RS20190 e6719e56bbf21fff9abbcb01926b8c14 216 Gene3D G3DSA:1.20.58.220 117 214 1.4E-33 T 25-04-2017 CLFO_RS16015 53015d1855750efb2949812d0c9d545d 125 Gene3D G3DSA:3.30.479.10 2 118 1.0E-39 T 25-04-2017 CLFO_RS16015 53015d1855750efb2949812d0c9d545d 125 PIRSF PIRSF006113 1 119 6.7E-31 T 25-04-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CLFO_RS16015 53015d1855750efb2949812d0c9d545d 125 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 91 1.8E-32 T 25-04-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CLFO_RS16015 53015d1855750efb2949812d0c9d545d 125 SUPERFAMILY SSF55620 3 117 6.67E-40 T 25-04-2017 CLFO_RS16015 53015d1855750efb2949812d0c9d545d 125 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 118 3.6E-38 T 25-04-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CLFO_RS04865 712772077a26e05793db805e5234e26b 63 Pfam PF04024 PspC domain 3 59 2.6E-21 T 25-04-2017 IPR007168 Phage shock protein, PspC, N-terminal CLFO_RS08915 e6e065ee582ee1ddd899712c7bbf6d67 337 SMART SM00382 56 187 1.6E-13 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS08915 e6e065ee582ee1ddd899712c7bbf6d67 337 Gene3D G3DSA:1.10.8.60 188 260 1.0E-31 T 25-04-2017 CLFO_RS08915 e6e065ee582ee1ddd899712c7bbf6d67 337 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 337 169.765 T 25-04-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CLFO_RS08915 e6e065ee582ee1ddd899712c7bbf6d67 337 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 3.2E-34 T 25-04-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CLFO_RS08915 e6e065ee582ee1ddd899712c7bbf6d67 337 Gene3D G3DSA:1.10.10.10 262 333 1.5E-33 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS08915 e6e065ee582ee1ddd899712c7bbf6d67 337 SUPERFAMILY SSF46785 261 333 2.81E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS08915 e6e065ee582ee1ddd899712c7bbf6d67 337 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 29 331 3.8E-146 T 25-04-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CLFO_RS08915 e6e065ee582ee1ddd899712c7bbf6d67 337 Gene3D G3DSA:3.40.50.300 26 184 3.5E-34 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08915 e6e065ee582ee1ddd899712c7bbf6d67 337 SUPERFAMILY SSF52540 25 253 5.02E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08915 e6e065ee582ee1ddd899712c7bbf6d67 337 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 267 332 9.0E-27 T 25-04-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CLFO_RS08915 e6e065ee582ee1ddd899712c7bbf6d67 337 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 240 8.6E-119 T 25-04-2017 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CLFO_RS07185 ef1e93724ebb8c055d6584688fbe2551 582 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS07185 ef1e93724ebb8c055d6584688fbe2551 582 Gene3D G3DSA:1.20.1560.10 4 320 2.4E-73 T 25-04-2017 CLFO_RS07185 ef1e93724ebb8c055d6584688fbe2551 582 SMART SM00382 363 555 6.0E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS07185 ef1e93724ebb8c055d6584688fbe2551 582 Pfam PF00664 ABC transporter transmembrane region 19 290 2.4E-44 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS07185 ef1e93724ebb8c055d6584688fbe2551 582 SUPERFAMILY SSF90123 5 323 3.53E-74 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS07185 ef1e93724ebb8c055d6584688fbe2551 582 Pfam PF00005 ABC transporter 354 502 4.7E-30 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS07185 ef1e93724ebb8c055d6584688fbe2551 582 SUPERFAMILY SSF52540 332 574 2.24E-85 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07185 ef1e93724ebb8c055d6584688fbe2551 582 Gene3D G3DSA:3.40.50.300 339 577 2.0E-74 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16640 df265e1dcd9af849c70eb1aad01acda6 154 Pfam PF01799 [2Fe-2S] binding domain 76 145 9.8E-26 T 25-04-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLFO_RS16640 df265e1dcd9af849c70eb1aad01acda6 154 SUPERFAMILY SSF54292 3 81 1.84E-22 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS16640 df265e1dcd9af849c70eb1aad01acda6 154 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 57 5.3E-6 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS16640 df265e1dcd9af849c70eb1aad01acda6 154 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 25-04-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CLFO_RS16640 df265e1dcd9af849c70eb1aad01acda6 154 SUPERFAMILY SSF47741 76 149 2.75E-27 T 25-04-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLFO_RS16640 df265e1dcd9af849c70eb1aad01acda6 154 Gene3D G3DSA:1.10.150.120 78 151 3.3E-27 T 25-04-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLFO_RS16640 df265e1dcd9af849c70eb1aad01acda6 154 Gene3D G3DSA:3.10.20.30 3 77 1.6E-28 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS09205 74e7421452478e7b430d3800ad771540 295 Pfam PF00535 Glycosyl transferase family 2 22 196 5.5E-27 T 25-04-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLFO_RS09205 74e7421452478e7b430d3800ad771540 295 SUPERFAMILY SSF53448 17 245 4.4E-45 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS09205 74e7421452478e7b430d3800ad771540 295 Gene3D G3DSA:3.90.550.10 19 260 5.0E-45 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 324 336 1.0E-29 T 25-04-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 427 444 1.0E-29 T 25-04-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 257 267 1.0E-29 T 25-04-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 374 390 1.0E-29 T 25-04-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 228 242 1.0E-29 T 25-04-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 Gene3D G3DSA:3.40.50.150 240 445 5.9E-62 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 SUPERFAMILY SSF48013 1 153 4.97E-37 T 25-04-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 Gene3D G3DSA:3.30.70.1170 179 234 4.1E-6 T 25-04-2017 CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 Pfam PF01189 16S rRNA methyltransferase RsmB/F 246 443 4.2E-61 T 25-04-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 154 242 2.7E-7 T 25-04-2017 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 181 444 3.1E-63 T 25-04-2017 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 445 5.2E-121 T 25-04-2017 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 Pfam PF01029 NusB family 1 125 1.3E-33 T 25-04-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 SUPERFAMILY SSF53335 141 445 2.23E-70 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11390 f524e1c25069534c63ddb92ca5f26bc7 445 Gene3D G3DSA:1.10.940.10 1 154 1.7E-44 T 25-04-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLFO_RS09665 f964242b9ffe51ce76f432dc3ed48dde 65 Pfam PF06686 Stage III sporulation protein AC/AD protein family 6 61 3.5E-18 T 25-04-2017 IPR025664 Stage III sporulation protein AC/AD family CLFO_RS09665 f964242b9ffe51ce76f432dc3ed48dde 65 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 1 64 2.6E-30 T 25-04-2017 IPR009570 Stage III sporulation protein AC CLFO_RS08495 a60b19b6afc87507d84f28a1b83b7c9b 133 SMART SM00851 14 107 5.9E-18 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS08495 a60b19b6afc87507d84f28a1b83b7c9b 133 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 2 121 2.6E-59 T 25-04-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CLFO_RS08495 a60b19b6afc87507d84f28a1b83b7c9b 133 SUPERFAMILY SSF52335 1 131 1.68E-51 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS08495 a60b19b6afc87507d84f28a1b83b7c9b 133 ProSitePatterns PS01335 Methylglyoxal synthase active site. 54 62 - T 25-04-2017 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CLFO_RS08495 a60b19b6afc87507d84f28a1b83b7c9b 133 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 35.203 T 25-04-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CLFO_RS08495 a60b19b6afc87507d84f28a1b83b7c9b 133 Pfam PF02142 MGS-like domain 15 107 1.4E-16 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS08495 a60b19b6afc87507d84f28a1b83b7c9b 133 Gene3D G3DSA:3.40.50.1380 1 131 1.4E-60 T 25-04-2017 IPR011607 Methylglyoxal synthase-like domain CLFO_RS08495 a60b19b6afc87507d84f28a1b83b7c9b 133 PIRSF PIRSF006614 1 133 9.1E-61 T 25-04-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CLFO_RS06700 cc9b65ff87d10d6d41fea8615fb1e865 79 Pfam PF00578 AhpC/TSA family 38 77 1.2E-7 T 25-04-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CLFO_RS06700 cc9b65ff87d10d6d41fea8615fb1e865 79 SUPERFAMILY SSF52833 36 78 1.72E-10 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS06700 cc9b65ff87d10d6d41fea8615fb1e865 79 Gene3D G3DSA:3.40.30.10 37 79 9.6E-11 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS09440 a10ff61f67c64dd9ad0d3c9e47357a57 159 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 158 37.64 T 25-04-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CLFO_RS09440 a10ff61f67c64dd9ad0d3c9e47357a57 159 SUPERFAMILY SSF55068 1 156 9.16E-69 T 25-04-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CLFO_RS09440 a10ff61f67c64dd9ad0d3c9e47357a57 159 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 152 3.0E-63 T 25-04-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CLFO_RS09440 a10ff61f67c64dd9ad0d3c9e47357a57 159 Pfam PF01625 Peptide methionine sulfoxide reductase 3 153 2.5E-64 T 25-04-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CLFO_RS09440 a10ff61f67c64dd9ad0d3c9e47357a57 159 Gene3D G3DSA:3.30.1060.10 1 153 1.5E-69 T 25-04-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 Gene3D G3DSA:2.40.50.140 128 185 1.3E-30 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 25-04-2017 IPR013852 Translation elongation factor P/YeiP, conserved site CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 Gene3D G3DSA:2.40.50.140 64 127 1.1E-25 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 SUPERFAMILY SSF50249 128 185 2.57E-19 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 3.7E-22 T 25-04-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 50.3 T 25-04-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 SMART SM01185 67 121 1.5E-25 T 25-04-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 PIRSF PIRSF005901 1 185 9.7E-67 T 25-04-2017 IPR020599 Translation elongation factor P/YeiP CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 Gene3D G3DSA:2.30.30.30 1 63 1.0E-28 T 25-04-2017 IPR014722 Ribosomal protein L2 domain 2 CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 6.9E-27 T 25-04-2017 IPR013185 Translation elongation factor, KOW-like CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 2.8E-29 T 25-04-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 SUPERFAMILY SSF50104 1 62 2.06E-21 T 25-04-2017 IPR008991 Translation protein SH3-like domain CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 SMART SM00841 129 184 8.4E-36 T 25-04-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 SUPERFAMILY SSF50249 65 129 9.85E-19 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS09645 fde0a86e00f73a9dbfd5286bb6988dad 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 5.6E-79 T 25-04-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CLFO_RS17755 c6c41d14cc9cc7c7a097c08134d07910 283 Gene3D G3DSA:3.40.50.1000 2 104 7.0E-16 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS17755 c6c41d14cc9cc7c7a097c08134d07910 283 Gene3D G3DSA:3.40.50.1000 180 229 7.0E-16 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS17755 c6c41d14cc9cc7c7a097c08134d07910 283 PIRSF PIRSF030802 1 242 8.8E-20 T 25-04-2017 IPR024197 Uncharacterised conserved protein UCP030802 CLFO_RS17755 c6c41d14cc9cc7c7a097c08134d07910 283 SUPERFAMILY SSF56784 2 227 3.83E-23 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS17755 c6c41d14cc9cc7c7a097c08134d07910 283 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 48 226 1.0E-7 T 25-04-2017 IPR006380 Sucrose-phosphatase, N-terminal CLFO_RS18905 b277f656e90793387511674defe0bf69 274 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 13 255 2.5E-78 T 25-04-2017 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 CLFO_RS18905 b277f656e90793387511674defe0bf69 274 Gene3D G3DSA:3.40.1700.10 114 242 4.6E-51 T 25-04-2017 CLFO_RS18905 b277f656e90793387511674defe0bf69 274 SUPERFAMILY SSF143597 41 243 5.89E-66 T 25-04-2017 CLFO_RS18905 b277f656e90793387511674defe0bf69 274 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 120 237 1.1E-43 T 25-04-2017 IPR003390 DNA integrity scanning protein, DisA, N-terminal CLFO_RS18905 b277f656e90793387511674defe0bf69 274 PIRSF PIRSF004793 6 270 5.7E-90 T 25-04-2017 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 CLFO_RS14295 2642420d17be5485c29b4e631bb895d2 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 297 2.2E-88 T 25-04-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14295 2642420d17be5485c29b4e631bb895d2 511 SUPERFAMILY SSF64158 76 305 2.48E-88 T 25-04-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14295 2642420d17be5485c29b4e631bb895d2 511 Gene3D G3DSA:3.40.720.10 313 509 2.2E-89 T 25-04-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLFO_RS14295 2642420d17be5485c29b4e631bb895d2 511 Gene3D G3DSA:3.40.720.10 2 76 2.2E-89 T 25-04-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLFO_RS14295 2642420d17be5485c29b4e631bb895d2 511 Pfam PF01676 Metalloenzyme superfamily 3 498 7.4E-78 T 25-04-2017 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CLFO_RS14295 2642420d17be5485c29b4e631bb895d2 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 3 509 2.5E-221 T 25-04-2017 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14295 2642420d17be5485c29b4e631bb895d2 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 510 50.69 T 25-04-2017 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14295 2642420d17be5485c29b4e631bb895d2 511 Gene3D G3DSA:3.40.1450.10 77 309 1.9E-100 T 25-04-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS14295 2642420d17be5485c29b4e631bb895d2 511 SUPERFAMILY SSF53649 309 508 8.77E-75 T 25-04-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLFO_RS14295 2642420d17be5485c29b4e631bb895d2 511 SUPERFAMILY SSF53649 2 76 8.77E-75 T 25-04-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLFO_RS14295 2642420d17be5485c29b4e631bb895d2 511 PIRSF PIRSF001492 1 511 2.4E-211 T 25-04-2017 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS08255 16553a0f69243c07fff55ecd9d4e6068 432 Pfam PF01926 50S ribosome-binding GTPase 210 336 9.3E-18 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS08255 16553a0f69243c07fff55ecd9d4e6068 432 Gene3D G3DSA:3.40.50.300 187 219 1.2E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08255 16553a0f69243c07fff55ecd9d4e6068 432 PIRSF PIRSF006809 8 432 3.2E-152 T 25-04-2017 IPR016496 GTPase HflX GO:0005525 CLFO_RS08255 16553a0f69243c07fff55ecd9d4e6068 432 Pfam PF13167 GTP-binding GTPase N-terminal 35 122 2.2E-35 T 25-04-2017 IPR025121 GTPase HflX, N-terminal CLFO_RS08255 16553a0f69243c07fff55ecd9d4e6068 432 Hamap MF_00900 GTPase HflX [hflX]. 37 403 47.271 T 25-04-2017 IPR016496 GTPase HflX GO:0005525 CLFO_RS08255 16553a0f69243c07fff55ecd9d4e6068 432 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 18 373 3.4E-141 T 25-04-2017 IPR016496 GTPase HflX GO:0005525 CLFO_RS08255 16553a0f69243c07fff55ecd9d4e6068 432 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 285 303 1.8E-6 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS08255 16553a0f69243c07fff55ecd9d4e6068 432 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 230 1.8E-6 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS08255 16553a0f69243c07fff55ecd9d4e6068 432 SUPERFAMILY SSF52540 207 377 8.46E-34 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08255 16553a0f69243c07fff55ecd9d4e6068 432 Pfam PF16360 GTP-binding GTPase Middle Region 124 202 7.0E-33 T 25-04-2017 IPR032305 GTP-binding protein, middle domain CLFO_RS08255 16553a0f69243c07fff55ecd9d4e6068 432 Gene3D G3DSA:3.40.50.300 220 375 1.5E-29 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04615 e2ee402f3ec8230e5f8dda5a8dc8ea36 497 Pfam PF02875 Mur ligase family, glutamate ligase domain 324 388 1.4E-6 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS04615 e2ee402f3ec8230e5f8dda5a8dc8ea36 497 Gene3D G3DSA:3.40.1190.10 83 326 2.1E-72 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS04615 e2ee402f3ec8230e5f8dda5a8dc8ea36 497 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 90 113 - T 25-04-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CLFO_RS04615 e2ee402f3ec8230e5f8dda5a8dc8ea36 497 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 5 485 1.0E-100 T 25-04-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CLFO_RS04615 e2ee402f3ec8230e5f8dda5a8dc8ea36 497 SUPERFAMILY SSF53623 83 320 3.14E-65 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS04615 e2ee402f3ec8230e5f8dda5a8dc8ea36 497 SUPERFAMILY SSF53244 324 463 2.56E-14 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS04615 e2ee402f3ec8230e5f8dda5a8dc8ea36 497 Gene3D G3DSA:3.90.190.20 327 464 2.1E-12 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS04615 e2ee402f3ec8230e5f8dda5a8dc8ea36 497 Gene3D G3DSA:3.40.1390.10 5 81 6.3E-22 T 25-04-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLFO_RS04615 e2ee402f3ec8230e5f8dda5a8dc8ea36 497 Pfam PF08245 Mur ligase middle domain 92 303 2.1E-52 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS04615 e2ee402f3ec8230e5f8dda5a8dc8ea36 497 Pfam PF01225 Mur ligase family, catalytic domain 7 66 6.8E-13 T 25-04-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLFO_RS04615 e2ee402f3ec8230e5f8dda5a8dc8ea36 497 SUPERFAMILY SSF63418 4 81 3.4E-21 T 25-04-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLFO_RS16155 c6a2533989e754c7686d46e9d8a1d4fa 649 Gene3D G3DSA:3.60.110.10 10 287 1.9E-45 T 25-04-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CLFO_RS16155 c6a2533989e754c7686d46e9d8a1d4fa 649 Pfam PF00795 Carbon-nitrogen hydrolase 34 276 9.2E-11 T 25-04-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CLFO_RS16155 c6a2533989e754c7686d46e9d8a1d4fa 649 PIRSF PIRSF006630 8 640 1.9E-153 T 25-04-2017 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 CLFO_RS16155 c6a2533989e754c7686d46e9d8a1d4fa 649 SUPERFAMILY SSF52402 319 619 4.93E-72 T 25-04-2017 CLFO_RS16155 c6a2533989e754c7686d46e9d8a1d4fa 649 SUPERFAMILY SSF56317 9 289 8.5E-42 T 25-04-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CLFO_RS16155 c6a2533989e754c7686d46e9d8a1d4fa 649 Gene3D G3DSA:3.40.50.620 320 618 5.6E-67 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS16155 c6a2533989e754c7686d46e9d8a1d4fa 649 Pfam PF02540 NAD synthase 344 555 1.9E-32 T 25-04-2017 IPR022310 NAD/GMP synthase CLFO_RS16155 c6a2533989e754c7686d46e9d8a1d4fa 649 TIGRFAM TIGR00552 nadE: NAD+ synthetase 344 507 2.9E-26 T 25-04-2017 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 818 1233 9.4E-90 T 25-04-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 SUPERFAMILY SSF160975 1370 1414 5.23E-6 T 25-04-2017 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Gene3D G3DSA:3.20.20.140 626 789 2.5E-62 T 25-04-2017 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Gene3D G3DSA:3.20.20.140 331 418 2.5E-62 T 25-04-2017 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Pfam PF02811 PHP domain 334 691 5.8E-53 T 25-04-2017 IPR004013 PHP domain GO:0003824 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 235 1431 0.0 T 25-04-2017 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1431 375.466 T 25-04-2017 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 SMART SM00479 418 583 3.5E-50 T 25-04-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Pfam PF01336 OB-fold nucleic acid binding domain 238 304 8.6E-7 T 25-04-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Gene3D G3DSA:2.40.50.140 228 323 7.3E-10 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Pfam PF11490 DNA polymerase III polC-type N-terminus II 93 206 6.1E-9 T 25-04-2017 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Pfam PF00929 Exonuclease 420 574 4.0E-36 T 25-04-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 416 632 8.9E-43 T 25-04-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Pfam PF14579 Helix-hairpin-helix motif 1343 1423 5.4E-13 T 25-04-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 SMART SM00481 333 400 1.6E-24 T 25-04-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Gene3D G3DSA:3.30.420.10 419 555 1.5E-48 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Gene3D G3DSA:1.20.5.140 557 591 1.6E-17 T 25-04-2017 IPR023223 DNA polymerase III/inhibitor IA3, alpha-helix domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 Gene3D G3DSA:1.10.150.280 1367 1419 1.7E-11 T 25-04-2017 CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 SUPERFAMILY SSF50249 233 307 2.14E-7 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10905 f5e088674c65e474ade43bc824fe0475 1431 SUPERFAMILY SSF53098 418 871 9.97E-105 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS00460 91a562748eda3a617e50c7703d025b30 287 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 51 78 - T 25-04-2017 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CLFO_RS00460 91a562748eda3a617e50c7703d025b30 287 Gene3D G3DSA:3.40.50.150 4 211 5.9E-78 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS00460 91a562748eda3a617e50c7703d025b30 287 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 19 282 2.1E-86 T 25-04-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CLFO_RS00460 91a562748eda3a617e50c7703d025b30 287 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 284 55.846 T 25-04-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CLFO_RS00460 91a562748eda3a617e50c7703d025b30 287 SMART SM00650 35 210 1.2E-78 T 25-04-2017 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CLFO_RS00460 91a562748eda3a617e50c7703d025b30 287 Gene3D G3DSA:1.10.8.100 214 283 1.1E-20 T 25-04-2017 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 CLFO_RS00460 91a562748eda3a617e50c7703d025b30 287 Pfam PF00398 Ribosomal RNA adenine dimethylase 19 277 1.6E-67 T 25-04-2017 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CLFO_RS00460 91a562748eda3a617e50c7703d025b30 287 SUPERFAMILY SSF53335 12 283 1.48E-74 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS09680 f709ee8bca5c67ec413309a2b1145e40 210 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 2 109 1.8E-22 T 25-04-2017 IPR014245 Sporulation stage III, protein AF CLFO_RS09680 f709ee8bca5c67ec413309a2b1145e40 210 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 12 204 1.4E-36 T 25-04-2017 IPR014245 Sporulation stage III, protein AF CLFO_RS02795 dac90f00572a107e4ee3e9b811af4d92 543 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 3 540 1.8E-219 T 25-04-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS02795 dac90f00572a107e4ee3e9b811af4d92 543 Hamap MF_00069 Hydroxylamine reductase [hcp]. 3 542 22.75 T 25-04-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS02795 dac90f00572a107e4ee3e9b811af4d92 543 Gene3D G3DSA:1.20.1270.20 1 146 7.5E-42 T 25-04-2017 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS02795 dac90f00572a107e4ee3e9b811af4d92 543 SUPERFAMILY SSF56821 1 540 1.83E-201 T 25-04-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLFO_RS02795 dac90f00572a107e4ee3e9b811af4d92 543 Gene3D G3DSA:3.40.50.2030 372 540 2.6E-73 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS02795 dac90f00572a107e4ee3e9b811af4d92 543 PIRSF PIRSF000076 3 543 2.5E-253 T 25-04-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS02795 dac90f00572a107e4ee3e9b811af4d92 543 Gene3D G3DSA:3.40.50.2030 222 371 1.6E-67 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS02795 dac90f00572a107e4ee3e9b811af4d92 543 Pfam PF03063 Prismane/CO dehydrogenase family 3 538 6.7E-175 T 25-04-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS02795 dac90f00572a107e4ee3e9b811af4d92 543 Gene3D G3DSA:1.20.1270.20 147 220 9.8E-29 T 25-04-2017 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 Pfam PF01471 Putative peptidoglycan binding domain 135 190 3.9E-17 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 SUPERFAMILY SSF47090 120 193 2.62E-24 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 SUPERFAMILY SSF54106 71 116 2.49E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 SMART SM00257 14 58 4.4E-14 T 25-04-2017 IPR018392 LysM domain CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 SMART SM00257 72 116 1.3E-15 T 25-04-2017 IPR018392 LysM domain CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 SMART SM00257 208 252 6.9E-15 T 25-04-2017 IPR018392 LysM domain CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 Gene3D G3DSA:3.10.350.10 14 58 1.4E-13 T 25-04-2017 IPR018392 LysM domain CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 Gene3D G3DSA:3.10.350.10 71 116 2.1E-15 T 25-04-2017 IPR018392 LysM domain CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 Gene3D G3DSA:3.10.350.10 207 253 1.6E-15 T 25-04-2017 IPR018392 LysM domain CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 SUPERFAMILY SSF54106 207 253 6.41E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 Pfam PF01476 LysM domain 209 252 1.8E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 Pfam PF01476 LysM domain 73 116 1.7E-14 T 25-04-2017 IPR018392 LysM domain CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 Pfam PF01476 LysM domain 15 58 2.1E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 Gene3D G3DSA:1.10.101.10 126 192 7.4E-26 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS19475 5c1d907ea5ee43f6af1fd4d941c1cc6e 254 SUPERFAMILY SSF54106 14 58 1.24E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS02150 507a289b4f52e8588b7800837c05f46b 455 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 4.5E-215 T 25-04-2017 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CLFO_RS02150 507a289b4f52e8588b7800837c05f46b 455 Gene3D G3DSA:2.30.170.30 1 54 8.2E-23 T 25-04-2017 CLFO_RS02150 507a289b4f52e8588b7800837c05f46b 455 Gene3D G3DSA:3.20.20.70 143 453 1.1E-158 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS02150 507a289b4f52e8588b7800837c05f46b 455 Gene3D G3DSA:1.10.220.70 55 141 4.7E-38 T 25-04-2017 CLFO_RS02150 507a289b4f52e8588b7800837c05f46b 455 PIRSF PIRSF018788 1 455 1.6E-237 T 25-04-2017 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CLFO_RS20620 53e583bf8bfd12d3241c6d0f22d4f8fa 65 SUPERFAMILY SSF54285 1 65 1.4E-11 T 25-04-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLFO_RS20620 53e583bf8bfd12d3241c6d0f22d4f8fa 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 2.7E-11 T 25-04-2017 IPR010035 ThiS, thiamine-biosynthesis CLFO_RS20620 53e583bf8bfd12d3241c6d0f22d4f8fa 65 Gene3D G3DSA:3.10.20.30 1 65 8.4E-13 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS20620 53e583bf8bfd12d3241c6d0f22d4f8fa 65 Pfam PF02597 ThiS family 7 65 1.3E-6 T 25-04-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CLFO_RS15100 5b58a834780e34b1cb25a01ecf908447 234 Pfam PF09335 SNARE associated Golgi protein 75 191 4.2E-30 T 25-04-2017 IPR032816 SNARE associated Golgi protein CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 Pfam PF01522 Polysaccharide deacetylase 215 333 5.4E-35 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 SMART SM00257 138 182 1.4E-14 T 25-04-2017 IPR018392 LysM domain CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 SMART SM00257 28 73 1.3E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 SMART SM00257 80 124 2.0E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 SUPERFAMILY SSF54106 80 124 8.5E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 Gene3D G3DSA:3.20.20.370 206 406 2.1E-68 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 Gene3D G3DSA:3.10.350.10 27 74 9.4E-15 T 25-04-2017 IPR018392 LysM domain CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 SUPERFAMILY SSF54106 138 182 1.57E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 Gene3D G3DSA:3.10.350.10 138 183 4.3E-16 T 25-04-2017 IPR018392 LysM domain CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 Gene3D G3DSA:3.10.350.10 80 125 1.9E-14 T 25-04-2017 IPR018392 LysM domain CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 SUPERFAMILY SSF88713 206 407 1.71E-65 T 25-04-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 Pfam PF01476 LysM domain 139 182 1.6E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 Pfam PF01476 LysM domain 81 124 1.1E-9 T 25-04-2017 IPR018392 LysM domain CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 Pfam PF01476 LysM domain 29 73 2.8E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS19365 772172b53826dc2c2f207b7c6cb91ca6 411 SUPERFAMILY SSF54106 27 73 2.88E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS07685 6907a453ff89cf06b3264c39dd9280ed 282 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 86 7.7E-9 T 25-04-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLFO_RS07685 6907a453ff89cf06b3264c39dd9280ed 282 SUPERFAMILY SSF56349 5 277 4.12E-41 T 25-04-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLFO_RS07685 6907a453ff89cf06b3264c39dd9280ed 282 Pfam PF00589 Phage integrase family 108 266 1.8E-34 T 25-04-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS07685 6907a453ff89cf06b3264c39dd9280ed 282 Gene3D G3DSA:1.10.443.10 108 276 1.1E-36 T 25-04-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS07685 6907a453ff89cf06b3264c39dd9280ed 282 Gene3D G3DSA:1.10.150.130 4 90 1.5E-12 T 25-04-2017 IPR023109 Integrase/recombinase, N-terminal CLFO_RS15605 a6f321f96fd3c3486c1bb7a41fedf52f 404 Pfam PF13533 Biotin-lipoyl like 66 111 1.0E-8 T 25-04-2017 CLFO_RS15605 a6f321f96fd3c3486c1bb7a41fedf52f 404 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 180 400 6.8E-49 T 25-04-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CLFO_RS15605 a6f321f96fd3c3486c1bb7a41fedf52f 404 SUPERFAMILY SSF111369 57 118 5.75E-28 T 25-04-2017 CLFO_RS15605 a6f321f96fd3c3486c1bb7a41fedf52f 404 SUPERFAMILY SSF111369 193 322 5.75E-28 T 25-04-2017 CLFO_RS15605 a6f321f96fd3c3486c1bb7a41fedf52f 404 SUPERFAMILY SSF111369 147 166 5.75E-28 T 25-04-2017 CLFO_RS15605 a6f321f96fd3c3486c1bb7a41fedf52f 404 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 205 318 5.7E-25 T 25-04-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLFO_RS15605 a6f321f96fd3c3486c1bb7a41fedf52f 404 Gene3D G3DSA:2.40.50.100 214 247 2.0E-16 T 25-04-2017 CLFO_RS15605 a6f321f96fd3c3486c1bb7a41fedf52f 404 Gene3D G3DSA:2.40.50.100 66 99 2.0E-16 T 25-04-2017 CLFO_RS06620 27585fa888b4b626064f5b24f946357a 234 Pfam PF07702 UTRA domain 98 227 5.6E-28 T 25-04-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CLFO_RS06620 27585fa888b4b626064f5b24f946357a 234 SUPERFAMILY SSF64288 65 231 9.58E-35 T 25-04-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLFO_RS06620 27585fa888b4b626064f5b24f946357a 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 4.0E-5 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS06620 27585fa888b4b626064f5b24f946357a 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 4.0E-5 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS06620 27585fa888b4b626064f5b24f946357a 234 Gene3D G3DSA:1.10.10.10 6 72 1.2E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06620 27585fa888b4b626064f5b24f946357a 234 SMART SM00866 92 229 1.3E-23 T 25-04-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CLFO_RS06620 27585fa888b4b626064f5b24f946357a 234 SUPERFAMILY SSF46785 7 88 2.59E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06620 27585fa888b4b626064f5b24f946357a 234 Gene3D G3DSA:3.40.1410.10 73 230 2.1E-37 T 25-04-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLFO_RS06620 27585fa888b4b626064f5b24f946357a 234 SMART SM00345 16 75 1.1E-21 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS06620 27585fa888b4b626064f5b24f946357a 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 3.7E-19 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS16115 19a89a5285d20ef77524dedb6aa41115 655 Gene3D G3DSA:3.50.50.60 401 459 3.3E-30 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS16115 19a89a5285d20ef77524dedb6aa41115 655 Gene3D G3DSA:3.50.50.60 4 247 3.3E-30 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS16115 19a89a5285d20ef77524dedb6aa41115 655 SUPERFAMILY SSF51905 409 466 3.25E-19 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS16115 19a89a5285d20ef77524dedb6aa41115 655 SUPERFAMILY SSF51905 9 244 3.25E-19 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS16115 19a89a5285d20ef77524dedb6aa41115 655 Gene3D G3DSA:1.20.58.100 495 561 3.7E-5 T 25-04-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS16115 19a89a5285d20ef77524dedb6aa41115 655 Pfam PF00890 FAD binding domain 12 443 4.4E-13 T 25-04-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS03730 33287ae1d5c42336b44bfb18c1bd7276 483 PRINTS PR00084 Mannitol dehydrogenase signature 18 28 9.4E-6 T 25-04-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CLFO_RS03730 33287ae1d5c42336b44bfb18c1bd7276 483 PRINTS PR00084 Mannitol dehydrogenase signature 204 217 9.4E-6 T 25-04-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CLFO_RS03730 33287ae1d5c42336b44bfb18c1bd7276 483 PRINTS PR00084 Mannitol dehydrogenase signature 234 249 9.4E-6 T 25-04-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CLFO_RS03730 33287ae1d5c42336b44bfb18c1bd7276 483 Gene3D G3DSA:3.40.50.720 10 267 1.9E-76 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03730 33287ae1d5c42336b44bfb18c1bd7276 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 457 5.8E-60 T 25-04-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CLFO_RS03730 33287ae1d5c42336b44bfb18c1bd7276 483 SUPERFAMILY SSF51735 9 266 1.69E-75 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03730 33287ae1d5c42336b44bfb18c1bd7276 483 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 482 55.355 T 25-04-2017 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58 CLFO_RS03730 33287ae1d5c42336b44bfb18c1bd7276 483 SUPERFAMILY SSF48179 272 482 1.05E-45 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS03730 33287ae1d5c42336b44bfb18c1bd7276 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 171 5.0E-22 T 25-04-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CLFO_RS03730 33287ae1d5c42336b44bfb18c1bd7276 483 Gene3D G3DSA:1.10.1040.10 271 482 2.0E-62 T 25-04-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLFO_RS18680 a54f02b5c3f365c90b4803deb01b7548 571 Gene3D G3DSA:3.30.565.10 422 565 2.9E-21 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18680 a54f02b5c3f365c90b4803deb01b7548 571 SMART SM00387 464 565 1.9E-6 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18680 a54f02b5c3f365c90b4803deb01b7548 571 SUPERFAMILY SSF55874 426 563 6.42E-20 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18680 a54f02b5c3f365c90b4803deb01b7548 571 Pfam PF13492 GAF domain 267 358 1.6E-6 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS18680 a54f02b5c3f365c90b4803deb01b7548 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 515 8.4E-7 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18680 a54f02b5c3f365c90b4803deb01b7548 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 540 8.4E-7 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18680 a54f02b5c3f365c90b4803deb01b7548 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 562 8.4E-7 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18680 a54f02b5c3f365c90b4803deb01b7548 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 564 6.3E-9 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18680 a54f02b5c3f365c90b4803deb01b7548 571 SUPERFAMILY SSF55781 281 360 3.68E-6 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS18680 a54f02b5c3f365c90b4803deb01b7548 571 Pfam PF07694 5TMR of 5TMR-LYT 30 201 5.0E-58 T 25-04-2017 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CLFO_RS18680 a54f02b5c3f365c90b4803deb01b7548 571 Gene3D G3DSA:3.30.450.40 306 364 2.1E-5 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS18680 a54f02b5c3f365c90b4803deb01b7548 571 Pfam PF06580 Histidine kinase 372 450 1.9E-26 T 25-04-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLFO_RS09380 6eaee377b5b5f8aab0ccadd2d65d7a32 141 Gene3D G3DSA:3.20.80.10 44 138 1.2E-10 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS09380 6eaee377b5b5f8aab0ccadd2d65d7a32 141 Pfam PF14526 Integron-associated effector binding protein 15 136 4.3E-14 T 25-04-2017 IPR029441 Integron-associated effector binding protein CLFO_RS09380 6eaee377b5b5f8aab0ccadd2d65d7a32 141 SUPERFAMILY SSF55136 14 138 6.8E-8 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS09380 6eaee377b5b5f8aab0ccadd2d65d7a32 141 SMART SM00871 7 139 0.0016 T 25-04-2017 IPR010499 Bacterial transcription activator, effector binding CLFO_RS00945 780a551f17c0d6faa10ccc85c1245fa4 467 Gene3D G3DSA:3.90.1310.10 71 144 7.3E-12 T 25-04-2017 CLFO_RS00945 780a551f17c0d6faa10ccc85c1245fa4 467 Gene3D G3DSA:3.40.710.10 145 464 2.0E-96 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS00945 780a551f17c0d6faa10ccc85c1245fa4 467 SUPERFAMILY SSF56519 46 138 4.24E-10 T 25-04-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLFO_RS00945 780a551f17c0d6faa10ccc85c1245fa4 467 Pfam PF00905 Penicillin binding protein transpeptidase domain 157 460 6.6E-65 T 25-04-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLFO_RS00945 780a551f17c0d6faa10ccc85c1245fa4 467 SUPERFAMILY SSF56601 139 464 5.46E-92 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS00245 abcead816792da518e664ec091162f05 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 337 3.0E-75 T 25-04-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like CLFO_RS00245 abcead816792da518e664ec091162f05 338 Pfam PF02618 YceG-like family 37 329 7.4E-79 T 25-04-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like CLFO_RS00245 abcead816792da518e664ec091162f05 338 Gene3D G3DSA:3.30.160.60 304 336 8.6E-10 T 25-04-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 CLFO_RS08470 f50e70cbb629df8b8ec8f7cf152419a0 162 Pfam PF04093 rod shape-determining protein MreD 3 156 2.1E-15 T 25-04-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CLFO_RS08470 f50e70cbb629df8b8ec8f7cf152419a0 162 PIRSF PIRSF037497 1 162 2.7E-41 T 25-04-2017 IPR017225 Cell shape-determining protein MreD, predicted CLFO_RS08470 f50e70cbb629df8b8ec8f7cf152419a0 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 3 149 3.4E-19 T 25-04-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CLFO_RS04680 59d8a1dc72c716d8fa81edb36cd21c60 477 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 48 471 2.4E-96 T 25-04-2017 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 CLFO_RS04680 59d8a1dc72c716d8fa81edb36cd21c60 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 49 68 1.9E-5 T 25-04-2017 CLFO_RS04680 59d8a1dc72c716d8fa81edb36cd21c60 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 423 445 1.9E-5 T 25-04-2017 CLFO_RS04680 59d8a1dc72c716d8fa81edb36cd21c60 477 Pfam PF00890 FAD binding domain 48 458 1.3E-71 T 25-04-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS04680 59d8a1dc72c716d8fa81edb36cd21c60 477 Gene3D G3DSA:3.90.700.10 297 410 6.3E-24 T 25-04-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS04680 59d8a1dc72c716d8fa81edb36cd21c60 477 Gene3D G3DSA:3.50.50.60 415 474 1.6E-82 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS04680 59d8a1dc72c716d8fa81edb36cd21c60 477 Gene3D G3DSA:3.50.50.60 34 274 1.6E-82 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS04680 59d8a1dc72c716d8fa81edb36cd21c60 477 SUPERFAMILY SSF56425 286 419 1.41E-23 T 25-04-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS04680 59d8a1dc72c716d8fa81edb36cd21c60 477 SUPERFAMILY SSF51905 36 291 1.19E-60 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS04680 59d8a1dc72c716d8fa81edb36cd21c60 477 SUPERFAMILY SSF51905 418 475 1.19E-60 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS04960 ef515e3dfd6c1ff1868a0cca0c5bbb02 716 Pfam PF02421 Ferrous iron transport protein B 28 181 8.3E-58 T 25-04-2017 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLFO_RS04960 ef515e3dfd6c1ff1868a0cca0c5bbb02 716 Pfam PF07670 Nucleoside recognition 389 480 4.8E-6 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS04960 ef515e3dfd6c1ff1868a0cca0c5bbb02 716 Pfam PF07670 Nucleoside recognition 561 684 1.1E-15 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS04960 ef515e3dfd6c1ff1868a0cca0c5bbb02 716 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 33 681 6.3E-120 T 25-04-2017 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLFO_RS04960 ef515e3dfd6c1ff1868a0cca0c5bbb02 716 Gene3D G3DSA:3.40.50.300 22 187 4.7E-28 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04960 ef515e3dfd6c1ff1868a0cca0c5bbb02 716 SUPERFAMILY SSF52540 29 204 3.94E-35 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04960 ef515e3dfd6c1ff1868a0cca0c5bbb02 716 Pfam PF07664 Ferrous iron transport protein B C terminus 501 550 1.8E-14 T 25-04-2017 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CLFO_RS16315 641b197055c5eab04c4673322419ceed 284 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 249 4.4E-27 T 25-04-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLFO_RS16315 641b197055c5eab04c4673322419ceed 284 Pfam PF00037 4Fe-4S binding domain 91 113 7.0E-5 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS16315 641b197055c5eab04c4673322419ceed 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 97 108 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS16315 641b197055c5eab04c4673322419ceed 284 Gene3D G3DSA:3.40.50.300 87 279 2.2E-52 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16315 641b197055c5eab04c4673322419ceed 284 Gene3D G3DSA:3.40.50.300 1 46 2.2E-52 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16315 641b197055c5eab04c4673322419ceed 284 SUPERFAMILY SSF52540 142 282 5.05E-31 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16315 641b197055c5eab04c4673322419ceed 284 SUPERFAMILY SSF52540 1 96 5.05E-31 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16315 641b197055c5eab04c4673322419ceed 284 Gene3D G3DSA:3.30.70.20 49 86 3.7E-5 T 25-04-2017 CLFO_RS20850 3db69b355726257a65e17facfd971f8c 487 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 10 478 2.8E-76 T 25-04-2017 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 CLFO_RS13090 cdfc5616e60fd41ab5aa6cdfad00ace9 377 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 25-04-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLFO_RS13090 cdfc5616e60fd41ab5aa6cdfad00ace9 377 Gene3D G3DSA:3.90.1150.10 244 376 6.1E-46 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS13090 cdfc5616e60fd41ab5aa6cdfad00ace9 377 SUPERFAMILY SSF53383 4 376 1.02E-108 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS13090 cdfc5616e60fd41ab5aa6cdfad00ace9 377 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 376 8.7E-150 T 25-04-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLFO_RS13090 cdfc5616e60fd41ab5aa6cdfad00ace9 377 Gene3D G3DSA:3.40.640.10 2 243 1.6E-94 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS13090 cdfc5616e60fd41ab5aa6cdfad00ace9 377 PIRSF PIRSF001434 1 377 3.3E-142 T 25-04-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLFO_RS04745 44c9ebf213862a425299a77425001ef0 327 Pfam PF00698 Acyl transferase domain 6 322 8.2E-36 T 25-04-2017 IPR014043 Acyl transferase CLFO_RS04745 44c9ebf213862a425299a77425001ef0 327 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 308 4.1E-25 T 25-04-2017 IPR020801 Polyketide synthase, acyl transferase domain CLFO_RS04745 44c9ebf213862a425299a77425001ef0 327 SUPERFAMILY SSF52151 198 290 2.62E-48 T 25-04-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CLFO_RS04745 44c9ebf213862a425299a77425001ef0 327 SUPERFAMILY SSF52151 5 135 2.62E-48 T 25-04-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CLFO_RS04745 44c9ebf213862a425299a77425001ef0 327 SUPERFAMILY SSF55048 134 197 1.44E-5 T 25-04-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CLFO_RS04745 44c9ebf213862a425299a77425001ef0 327 Gene3D G3DSA:3.40.366.10 197 290 1.9E-55 T 25-04-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CLFO_RS04745 44c9ebf213862a425299a77425001ef0 327 Gene3D G3DSA:3.40.366.10 3 130 1.9E-55 T 25-04-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CLFO_RS10875 779b45384a545c490756ea0b8565be80 129 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 116 21.109 T 25-04-2017 IPR000238 Ribosome-binding factor A GO:0006364 CLFO_RS10875 779b45384a545c490756ea0b8565be80 129 SUPERFAMILY SSF89919 3 103 7.46E-31 T 25-04-2017 IPR023799 Ribosome-binding factor A domain CLFO_RS10875 779b45384a545c490756ea0b8565be80 129 Gene3D G3DSA:3.30.300.20 4 116 1.2E-34 T 25-04-2017 IPR015946 K homology domain-like, alpha/beta CLFO_RS10875 779b45384a545c490756ea0b8565be80 129 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 114 2.8E-27 T 25-04-2017 IPR000238 Ribosome-binding factor A GO:0006364 CLFO_RS10875 779b45384a545c490756ea0b8565be80 129 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 96 6.0E-30 T 25-04-2017 IPR000238 Ribosome-binding factor A GO:0006364 CLFO_RS10875 779b45384a545c490756ea0b8565be80 129 Pfam PF02033 Ribosome-binding factor A 5 105 5.8E-29 T 25-04-2017 IPR000238 Ribosome-binding factor A GO:0006364 CLFO_RS19885 e2b9f9fdbbb8cecaa699a5181c16ba84 340 Hamap MF_00602 Protein-arginine kinase [mcsB]. 3 340 35.737 T 25-04-2017 IPR023660 Arginine kinase GO:0016775 CLFO_RS19885 e2b9f9fdbbb8cecaa699a5181c16ba84 340 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 10 243 3.3E-85 T 25-04-2017 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 CLFO_RS19885 e2b9f9fdbbb8cecaa699a5181c16ba84 340 SUPERFAMILY SSF55931 2 259 4.49E-84 T 25-04-2017 CLFO_RS19885 e2b9f9fdbbb8cecaa699a5181c16ba84 340 Gene3D G3DSA:3.30.590.10 3 245 8.7E-79 T 25-04-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CLFO_RS19885 e2b9f9fdbbb8cecaa699a5181c16ba84 340 ProSitePatterns PS00112 Phosphagen kinase active site signature. 158 164 - T 25-04-2017 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 CLFO_RS19620 131c44b6ffaf7375d89bfe560a9b956d 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 159 8.9E-31 T 25-04-2017 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CLFO_RS19620 131c44b6ffaf7375d89bfe560a9b956d 168 Gene3D G3DSA:3.30.160.20 12 75 7.3E-31 T 25-04-2017 IPR014720 Double-stranded RNA-binding domain CLFO_RS19620 131c44b6ffaf7375d89bfe560a9b956d 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 77 4.2E-30 T 25-04-2017 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CLFO_RS19620 131c44b6ffaf7375d89bfe560a9b956d 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 12 165 5.5E-68 T 25-04-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLFO_RS19620 131c44b6ffaf7375d89bfe560a9b956d 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 165 34.61 T 25-04-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLFO_RS19620 131c44b6ffaf7375d89bfe560a9b956d 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 25-04-2017 IPR018192 Ribosomal protein S5, N-terminal, conserved site CLFO_RS19620 131c44b6ffaf7375d89bfe560a9b956d 168 SUPERFAMILY SSF54211 82 161 1.92E-26 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS19620 131c44b6ffaf7375d89bfe560a9b956d 168 Gene3D G3DSA:3.30.230.10 78 161 3.3E-33 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS19620 131c44b6ffaf7375d89bfe560a9b956d 168 SUPERFAMILY SSF54768 10 78 6.17E-23 T 25-04-2017 CLFO_RS06770 7988afbdf8126850f4d489c248a17b2a 375 Pfam PF07687 Peptidase dimerisation domain 175 265 1.5E-9 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS06770 7988afbdf8126850f4d489c248a17b2a 375 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 7 361 5.7E-90 T 25-04-2017 IPR017439 Amidohydrolase GO:0016787 CLFO_RS06770 7988afbdf8126850f4d489c248a17b2a 375 Pfam PF01546 Peptidase family M20/M25/M40 65 370 4.2E-28 T 25-04-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLFO_RS06770 7988afbdf8126850f4d489c248a17b2a 375 Gene3D G3DSA:3.40.630.10 288 369 1.8E-77 T 25-04-2017 CLFO_RS06770 7988afbdf8126850f4d489c248a17b2a 375 Gene3D G3DSA:3.40.630.10 4 168 1.8E-77 T 25-04-2017 CLFO_RS06770 7988afbdf8126850f4d489c248a17b2a 375 PIRSF PIRSF005962 1 374 4.8E-106 T 25-04-2017 IPR017439 Amidohydrolase GO:0016787 CLFO_RS06770 7988afbdf8126850f4d489c248a17b2a 375 SUPERFAMILY SSF53187 288 369 5.91E-68 T 25-04-2017 CLFO_RS06770 7988afbdf8126850f4d489c248a17b2a 375 SUPERFAMILY SSF53187 4 187 5.91E-68 T 25-04-2017 CLFO_RS06770 7988afbdf8126850f4d489c248a17b2a 375 Gene3D G3DSA:3.30.70.360 174 287 5.9E-32 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS06770 7988afbdf8126850f4d489c248a17b2a 375 SUPERFAMILY SSF55031 176 285 2.62E-23 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS11515 2d9d7cca983df94fb684a215a89dd80c 321 SUPERFAMILY SSF88713 99 304 3.46E-51 T 25-04-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLFO_RS11515 2d9d7cca983df94fb684a215a89dd80c 321 Gene3D G3DSA:3.20.20.370 91 305 9.7E-56 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS11515 2d9d7cca983df94fb684a215a89dd80c 321 Pfam PF01522 Polysaccharide deacetylase 96 206 1.0E-27 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS09070 fb6acb2afd85d9c5719f959523ec0aae 473 SUPERFAMILY SSF53686 52 367 9.43E-56 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS09070 fb6acb2afd85d9c5719f959523ec0aae 473 Gene3D G3DSA:3.40.50.1100 198 366 1.2E-21 T 25-04-2017 CLFO_RS09070 fb6acb2afd85d9c5719f959523ec0aae 473 Gene3D G3DSA:3.40.50.1100 96 197 6.8E-18 T 25-04-2017 CLFO_RS09070 fb6acb2afd85d9c5719f959523ec0aae 473 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 59 366 6.5E-56 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS11215 264385fbadf2381981d9d99b8bba5dbe 166 SUPERFAMILY SSF50447 3 85 1.13E-16 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS11215 264385fbadf2381981d9d99b8bba5dbe 166 Gene3D G3DSA:2.30.30.240 94 164 2.4E-20 T 25-04-2017 CLFO_RS11215 264385fbadf2381981d9d99b8bba5dbe 166 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 163 1.4E-45 T 25-04-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CLFO_RS11215 264385fbadf2381981d9d99b8bba5dbe 166 Pfam PF05239 PRC-barrel domain 91 164 1.5E-10 T 25-04-2017 IPR027275 PRC-barrel domain CLFO_RS11215 264385fbadf2381981d9d99b8bba5dbe 166 SUPERFAMILY SSF50346 94 164 9.03E-19 T 25-04-2017 IPR011033 PRC-barrel-like CLFO_RS11215 264385fbadf2381981d9d99b8bba5dbe 166 Pfam PF01782 RimM N-terminal domain 6 85 4.6E-18 T 25-04-2017 IPR002676 RimM protein GO:0006364 CLFO_RS11215 264385fbadf2381981d9d99b8bba5dbe 166 Gene3D G3DSA:2.40.30.60 3 85 9.3E-13 T 25-04-2017 IPR002676 RimM protein GO:0006364 CLFO_RS11215 264385fbadf2381981d9d99b8bba5dbe 166 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 3 164 23.892 T 25-04-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 SMART SM00387 499 610 2.3E-32 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 271 384 9.6E-10 T 25-04-2017 IPR000014 PAS domain CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 Gene3D G3DSA:1.10.287.130 383 449 6.5E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 Gene3D G3DSA:3.30.450.20 268 382 1.4E-12 T 25-04-2017 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 609 7.0E-24 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 SUPERFAMILY SSF47384 370 453 7.46E-20 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 Pfam PF00672 HAMP domain 185 251 3.6E-13 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 SUPERFAMILY SSF55785 278 384 1.12E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 SUPERFAMILY SSF55874 442 607 1.83E-43 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 Gene3D G3DSA:3.30.565.10 459 607 8.3E-43 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 564 1.2E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 588 1.2E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 550 1.2E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 607 1.2E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 Pfam PF00512 His Kinase A (phospho-acceptor) domain 385 452 1.1E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 SMART SM00091 267 334 0.0054 T 25-04-2017 IPR000014 PAS domain CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 SUPERFAMILY SSF158472 206 251 7.19E-10 T 25-04-2017 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 SMART SM00388 385 453 9.2E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 Pfam PF00989 PAS fold 270 375 6.7E-7 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS14590 2fac65fad2dd61c47c9aeb559fc21ac6 611 SMART SM00304 204 256 3.5E-10 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS11530 102d7e587341f60a5bf1566890402c7f 64 SUPERFAMILY SSF55331 1 61 5.19E-11 T 25-04-2017 IPR014347 Tautomerase/MIF superfamily CLFO_RS11530 102d7e587341f60a5bf1566890402c7f 64 Pfam PF01361 Tautomerase enzyme 2 53 1.9E-6 T 25-04-2017 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CLFO_RS11530 102d7e587341f60a5bf1566890402c7f 64 Gene3D G3DSA:3.30.429.20 1 61 2.5E-13 T 25-04-2017 CLFO_RS05430 7410fbfe5bdd77b78ce373141a712ebd 507 SMART SM00917 369 499 1.0E-42 T 25-04-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS05430 7410fbfe5bdd77b78ce373141a712ebd 507 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 25-04-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS05430 7410fbfe5bdd77b78ce373141a712ebd 507 Pfam PF00682 HMGL-like 5 273 1.3E-99 T 25-04-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLFO_RS05430 7410fbfe5bdd77b78ce373141a712ebd 507 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 507 43.584 T 25-04-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS05430 7410fbfe5bdd77b78ce373141a712ebd 507 Gene3D G3DSA:3.20.20.70 1 346 2.0E-148 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS05430 7410fbfe5bdd77b78ce373141a712ebd 507 SUPERFAMILY SSF110921 397 498 2.75E-27 T 25-04-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS05430 7410fbfe5bdd77b78ce373141a712ebd 507 SUPERFAMILY SSF51569 1 291 2.2E-99 T 25-04-2017 CLFO_RS05430 7410fbfe5bdd77b78ce373141a712ebd 507 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 496 6.8E-228 T 25-04-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS05430 7410fbfe5bdd77b78ce373141a712ebd 507 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 499 1.8E-39 T 25-04-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS05430 7410fbfe5bdd77b78ce373141a712ebd 507 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 25-04-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS17955 d8c816923799627d587a455c61eb8af4 96 Pfam PF03334 Na+/H+ antiporter subunit 10 89 1.0E-26 T 25-04-2017 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 CLFO_RS17955 d8c816923799627d587a455c61eb8af4 96 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 10 94 3.0E-24 T 25-04-2017 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 Gene3D G3DSA:3.30.565.10 5 240 7.4E-60 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 154 9.4E-11 T 25-04-2017 CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 PIRSF PIRSF002583 1 626 2.5E-154 T 25-04-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 PRINTS PR00775 90kDa heat shock protein signature 92 109 6.2E-35 T 25-04-2017 IPR020575 Heat shock protein Hsp90, N-terminal CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 PRINTS PR00775 90kDa heat shock protein signature 118 140 6.2E-35 T 25-04-2017 IPR020575 Heat shock protein Hsp90, N-terminal CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 PRINTS PR00775 90kDa heat shock protein signature 187 205 6.2E-35 T 25-04-2017 IPR020575 Heat shock protein Hsp90, N-terminal CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 PRINTS PR00775 90kDa heat shock protein signature 169 186 6.2E-35 T 25-04-2017 IPR020575 Heat shock protein Hsp90, N-terminal CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 PRINTS PR00775 90kDa heat shock protein signature 25 47 6.2E-35 T 25-04-2017 IPR020575 Heat shock protein Hsp90, N-terminal CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 PRINTS PR00775 90kDa heat shock protein signature 74 91 6.2E-35 T 25-04-2017 IPR020575 Heat shock protein Hsp90, N-terminal CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 Pfam PF00183 Hsp90 protein 213 624 1.4E-61 T 25-04-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 SUPERFAMILY SSF110942 504 622 3.66E-9 T 25-04-2017 CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 SUPERFAMILY SSF55874 4 209 5.37E-55 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS20725 0ab4164015a1fbb31325db9d0e3a009e 627 SUPERFAMILY SSF54211 233 479 4.93E-68 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS11765 9657155a8b96af7eaabebdb76e5d3bbb 311 Gene3D G3DSA:3.40.50.150 5 110 1.8E-51 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11765 9657155a8b96af7eaabebdb76e5d3bbb 311 Gene3D G3DSA:3.40.50.150 218 311 1.8E-51 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11765 9657155a8b96af7eaabebdb76e5d3bbb 311 SUPERFAMILY SSF81799 114 215 2.62E-35 T 25-04-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS11765 9657155a8b96af7eaabebdb76e5d3bbb 311 SUPERFAMILY SSF53335 5 113 2.05E-43 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11765 9657155a8b96af7eaabebdb76e5d3bbb 311 SUPERFAMILY SSF53335 215 311 2.05E-43 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11765 9657155a8b96af7eaabebdb76e5d3bbb 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 311 39.007 T 25-04-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS11765 9657155a8b96af7eaabebdb76e5d3bbb 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 310 3.3E-121 T 25-04-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS11765 9657155a8b96af7eaabebdb76e5d3bbb 311 Gene3D G3DSA:1.10.150.170 112 217 2.0E-38 T 25-04-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS11765 9657155a8b96af7eaabebdb76e5d3bbb 311 PIRSF PIRSF004486 1 311 4.4E-117 T 25-04-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS11765 9657155a8b96af7eaabebdb76e5d3bbb 311 Pfam PF01795 MraW methylase family 3 310 5.9E-127 T 25-04-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 SUPERFAMILY SSF81923 6 150 2.98E-30 T 25-04-2017 IPR004176 Clp, N-terminal GO:0019538 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 Pfam PF02151 UvrB/uvrC motif 423 453 6.6E-6 T 25-04-2017 IPR001943 UVR domain GO:0005515 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 300 312 - T 25-04-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 SUPERFAMILY SSF52540 166 480 8.91E-79 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 SMART SM00382 542 723 2.9E-9 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 SMART SM00382 205 349 3.2E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 SMART SM01086 722 811 2.7E-35 T 25-04-2017 IPR019489 Clp ATPase, C-terminal CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 2.9E-18 T 25-04-2017 IPR004176 Clp, N-terminal GO:0019538 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 19 67 1.8E-16 T 25-04-2017 IPR004176 Clp, N-terminal GO:0019538 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 722 802 7.1E-27 T 25-04-2017 IPR019489 Clp ATPase, C-terminal CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 Gene3D G3DSA:3.40.50.300 495 668 6.6E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 Gene3D G3DSA:3.40.50.300 705 733 6.6E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 Pfam PF07724 AAA domain (Cdc48 subfamily) 541 716 1.0E-57 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 SUPERFAMILY SSF52540 491 806 1.81E-81 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 Gene3D G3DSA:1.10.8.60 734 812 1.5E-32 T 25-04-2017 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 Gene3D G3DSA:1.10.1780.10 5 146 2.6E-43 T 25-04-2017 IPR004176 Clp, N-terminal GO:0019538 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 339 1.3E-15 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 576 594 - T 25-04-2017 IPR028299 ClpA/B, conserved site 2 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 591 609 1.5E-42 T 25-04-2017 IPR001270 ClpA/B family GO:0005524 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 546 564 1.5E-42 T 25-04-2017 IPR001270 ClpA/B family GO:0005524 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 620 638 1.5E-42 T 25-04-2017 IPR001270 ClpA/B family GO:0005524 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 667 1.5E-42 T 25-04-2017 IPR001270 ClpA/B family GO:0005524 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 Gene3D G3DSA:1.10.8.60 349 433 1.4E-34 T 25-04-2017 CLFO_RS19880 ba4edb9986508719d127e54e2da20378 814 Gene3D G3DSA:3.40.50.300 167 348 1.4E-48 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05895 d30b464cacd2e75cf9062bf6781c2969 448 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 102 113 - T 25-04-2017 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS05895 d30b464cacd2e75cf9062bf6781c2969 448 Gene3D G3DSA:3.20.20.70 84 342 1.4E-57 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS05895 d30b464cacd2e75cf9062bf6781c2969 448 Pfam PF04055 Radical SAM superfamily 100 260 9.2E-21 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS05895 d30b464cacd2e75cf9062bf6781c2969 448 SUPERFAMILY SSF102114 87 315 4.71E-44 T 25-04-2017 CLFO_RS05895 d30b464cacd2e75cf9062bf6781c2969 448 SMART SM00729 96 303 0.0017 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS05895 d30b464cacd2e75cf9062bf6781c2969 448 Pfam PF13353 4Fe-4S single cluster domain 103 187 4.4E-7 T 25-04-2017 CLFO_RS12010 120e53e6d73e9159e8e32a3f7bdc64c9 556 Pfam PF09706 CRISPR-associated protein (Cas_CXXC_CXXC) 226 286 8.7E-20 T 25-04-2017 IPR019121 CRISPR-associated protein, CXXC-CXXC domain CLFO_RS12010 120e53e6d73e9159e8e32a3f7bdc64c9 556 TIGRFAM TIGR01908 cas_CXXC_CXXC: CRISPR-associated protein Cas8b1/Cst1, subtype I-B/TNEAP 225 507 2.3E-10 T 25-04-2017 IPR010180 CRISPR-associated protein, CXXC-CXXC CLFO_RS12520 5b488249217dce8239234aa50920f672 602 Pfam PF00009 Elongation factor Tu GTP binding domain 7 186 3.0E-55 T 25-04-2017 CLFO_RS12520 5b488249217dce8239234aa50920f672 602 Pfam PF00679 Elongation factor G C-terminus 404 491 1.1E-26 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS12520 5b488249217dce8239234aa50920f672 602 Hamap MF_00071 Elongation factor 4 [lepA]. 1 602 307.816 T 25-04-2017 IPR006297 Elongation factor 4 GO:0005525 CLFO_RS12520 5b488249217dce8239234aa50920f672 602 Pfam PF06421 GTP-binding protein LepA C-terminus 493 599 1.1E-51 T 25-04-2017 IPR013842 GTP-binding protein LepA, C-terminal CLFO_RS12520 5b488249217dce8239234aa50920f672 602 Gene3D G3DSA:3.30.70.870 297 374 1.9E-26 T 25-04-2017 CLFO_RS12520 5b488249217dce8239234aa50920f672 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 1.2E-22 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS12520 5b488249217dce8239234aa50920f672 602 Gene3D G3DSA:3.40.50.300 4 198 9.7E-63 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12520 5b488249217dce8239234aa50920f672 602 Gene3D G3DSA:2.40.30.10 199 294 2.3E-28 T 25-04-2017 CLFO_RS12520 5b488249217dce8239234aa50920f672 602 SMART SM00838 406 491 1.6E-4 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS12520 5b488249217dce8239234aa50920f672 602 Pfam PF03144 Elongation factor Tu domain 2 210 280 1.1E-12 T 25-04-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLFO_RS12520 5b488249217dce8239234aa50920f672 602 PRINTS PR00315 GTP-binding elongation factor signature 131 140 6.9E-15 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS12520 5b488249217dce8239234aa50920f672 602 PRINTS PR00315 GTP-binding elongation factor signature 95 106 6.9E-15 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS12520 5b488249217dce8239234aa50920f672 602 PRINTS PR00315 GTP-binding elongation factor signature 79 89 6.9E-15 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS12520 5b488249217dce8239234aa50920f672 602 PRINTS PR00315 GTP-binding elongation factor signature 11 24 6.9E-15 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS12520 5b488249217dce8239234aa50920f672 602 PRINTS PR00315 GTP-binding elongation factor signature 54 62 6.9E-15 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS12520 5b488249217dce8239234aa50920f672 602 Gene3D G3DSA:3.30.70.240 406 494 6.9E-25 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS12520 5b488249217dce8239234aa50920f672 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 25-04-2017 IPR031157 Tr-type G domain, conserved site CLFO_RS12520 5b488249217dce8239234aa50920f672 602 SUPERFAMILY SSF54980 297 375 1.15E-18 T 25-04-2017 IPR009022 Elongation factor G, III-V domain CLFO_RS12520 5b488249217dce8239234aa50920f672 602 TIGRFAM TIGR01393 lepA: elongation factor 4 7 601 0.0 T 25-04-2017 IPR006297 Elongation factor 4 GO:0005525 CLFO_RS12520 5b488249217dce8239234aa50920f672 602 SUPERFAMILY SSF54980 405 499 9.11E-28 T 25-04-2017 IPR009022 Elongation factor G, III-V domain CLFO_RS12520 5b488249217dce8239234aa50920f672 602 SUPERFAMILY SSF52540 5 227 8.64E-56 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17485 089e0cbb9caaff1778a3d811b2761ff3 232 Gene3D G3DSA:3.40.1410.10 65 228 1.3E-29 T 25-04-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLFO_RS17485 089e0cbb9caaff1778a3d811b2761ff3 232 SMART SM00866 86 226 1.5E-14 T 25-04-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CLFO_RS17485 089e0cbb9caaff1778a3d811b2761ff3 232 Gene3D G3DSA:1.10.10.10 2 64 6.8E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS17485 089e0cbb9caaff1778a3d811b2761ff3 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.6E-7 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS17485 089e0cbb9caaff1778a3d811b2761ff3 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.6E-7 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS17485 089e0cbb9caaff1778a3d811b2761ff3 232 SMART SM00345 9 68 9.2E-17 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS17485 089e0cbb9caaff1778a3d811b2761ff3 232 Pfam PF07702 UTRA domain 93 225 8.6E-21 T 25-04-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CLFO_RS17485 089e0cbb9caaff1778a3d811b2761ff3 232 SUPERFAMILY SSF64288 56 228 1.88E-25 T 25-04-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLFO_RS17485 089e0cbb9caaff1778a3d811b2761ff3 232 SUPERFAMILY SSF46785 4 78 3.24E-20 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS17485 089e0cbb9caaff1778a3d811b2761ff3 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 1.9E-17 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS13560 83cb636c4bde64b1111d30df01fa2dff 278 Gene3D G3DSA:3.30.70.20 35 107 1.0E-27 T 25-04-2017 CLFO_RS13560 83cb636c4bde64b1111d30df01fa2dff 278 Gene3D G3DSA:3.30.70.20 179 219 1.0E-27 T 25-04-2017 CLFO_RS13560 83cb636c4bde64b1111d30df01fa2dff 278 Pfam PF13247 4Fe-4S dicluster domain 98 193 2.0E-16 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS13560 83cb636c4bde64b1111d30df01fa2dff 278 Gene3D G3DSA:3.30.70.20 142 178 2.6E-9 T 25-04-2017 CLFO_RS13560 83cb636c4bde64b1111d30df01fa2dff 278 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 137 148 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS13560 83cb636c4bde64b1111d30df01fa2dff 278 SUPERFAMILY SSF54862 35 226 1.57E-51 T 25-04-2017 CLFO_RS13560 83cb636c4bde64b1111d30df01fa2dff 278 Gene3D G3DSA:3.30.70.20 108 141 6.2E-11 T 25-04-2017 CLFO_RS11590 ea32286bcd1880a70efec60091b1e595 84 SUPERFAMILY SSF53041 14 79 1.01E-9 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS11590 ea32286bcd1880a70efec60091b1e595 84 Pfam PF00239 Resolvase, N terminal domain 15 83 1.9E-7 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS11590 ea32286bcd1880a70efec60091b1e595 84 Gene3D G3DSA:3.40.50.1390 14 79 6.7E-8 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS09555 acc2767061520307b5f33ce31d5814ce 351 SMART SM00382 122 247 6.7E-6 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS09555 acc2767061520307b5f33ce31d5814ce 351 Gene3D G3DSA:3.40.50.300 101 342 3.7E-73 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09555 acc2767061520307b5f33ce31d5814ce 351 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 25-04-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CLFO_RS09555 acc2767061520307b5f33ce31d5814ce 351 SUPERFAMILY SSF52540 5 333 8.04E-72 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09555 acc2767061520307b5f33ce31d5814ce 351 Pfam PF00437 Type II/IV secretion system protein 8 264 1.7E-45 T 25-04-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CLFO_RS09555 acc2767061520307b5f33ce31d5814ce 351 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 337 4.1E-150 T 25-04-2017 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CLFO_RS14100 35c0b59ac83b88bc0da0c9e09a5fadb1 168 Pfam PF09512 Thiamine-precursor transporter protein (ThiW) 6 154 2.4E-55 T 25-04-2017 IPR012652 Energy coupling factor transporter S component ThiW CLFO_RS14100 35c0b59ac83b88bc0da0c9e09a5fadb1 168 TIGRFAM TIGR02359 thiW: energy coupling factor transporter S component ThiW 4 157 5.3E-50 T 25-04-2017 IPR012652 Energy coupling factor transporter S component ThiW CLFO_RS14100 35c0b59ac83b88bc0da0c9e09a5fadb1 168 PIRSF PIRSF024534 1 164 6.4E-54 T 25-04-2017 IPR012652 Energy coupling factor transporter S component ThiW CLFO_RS01155 5848bd6ec8ae0062152c116513621690 359 SUPERFAMILY SSF53756 6 354 5.5E-63 T 25-04-2017 CLFO_RS01155 5848bd6ec8ae0062152c116513621690 359 Gene3D G3DSA:3.40.50.2000 182 335 6.8E-19 T 25-04-2017 CLFO_RS01155 5848bd6ec8ae0062152c116513621690 359 Pfam PF13439 Glycosyltransferase Family 4 17 166 4.5E-10 T 25-04-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CLFO_RS01155 5848bd6ec8ae0062152c116513621690 359 Pfam PF00534 Glycosyl transferases group 1 182 334 8.0E-36 T 25-04-2017 IPR001296 Glycosyl transferase, family 1 CLFO_RS19700 0ec35fbcdb4cbe9f3c9120dfcada6cf1 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 37.841 T 25-04-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19700 0ec35fbcdb4cbe9f3c9120dfcada6cf1 207 Gene3D G3DSA:3.40.1370.10 58 207 8.2E-66 T 25-04-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CLFO_RS19700 0ec35fbcdb4cbe9f3c9120dfcada6cf1 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 2.4E-77 T 25-04-2017 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CLFO_RS19700 0ec35fbcdb4cbe9f3c9120dfcada6cf1 207 SUPERFAMILY SSF52166 1 206 7.59E-87 T 25-04-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CLFO_RS19700 0ec35fbcdb4cbe9f3c9120dfcada6cf1 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 9.0E-85 T 25-04-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS21095 57b39dbb6cfaa82b14bfdc5bea6a2559 186 Gene3D G3DSA:3.40.630.30 25 139 5.9E-23 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS21095 57b39dbb6cfaa82b14bfdc5bea6a2559 186 Pfam PF13302 Acetyltransferase (GNAT) domain 19 134 6.1E-16 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS21095 57b39dbb6cfaa82b14bfdc5bea6a2559 186 SUPERFAMILY SSF55729 20 140 2.34E-22 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS20515 e867fb177b4dc1c78365cc3d659dc7ee 341 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 32 340 1.9E-140 T 25-04-2017 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: R-HSA-70895 CLFO_RS20515 e867fb177b4dc1c78365cc3d659dc7ee 341 Gene3D G3DSA:3.20.10.10 164 326 1.4E-57 T 25-04-2017 CLFO_RS20515 e867fb177b4dc1c78365cc3d659dc7ee 341 Gene3D G3DSA:3.30.470.10 3 163 1.2E-68 T 25-04-2017 CLFO_RS20515 e867fb177b4dc1c78365cc3d659dc7ee 341 ProSitePatterns PS00770 Aminotransferases class-IV signature. 221 250 - T 25-04-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CLFO_RS20515 e867fb177b4dc1c78365cc3d659dc7ee 341 PIRSF PIRSF006468 1 341 5.4E-122 T 25-04-2017 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: R-HSA-70895 CLFO_RS20515 e867fb177b4dc1c78365cc3d659dc7ee 341 SUPERFAMILY SSF56752 5 337 1.57E-105 T 25-04-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CLFO_RS20515 e867fb177b4dc1c78365cc3d659dc7ee 341 Pfam PF01063 Amino-transferase class IV 57 294 5.0E-35 T 25-04-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CLFO_RS01880 43bb55ff2417fb67b5d18f859d17aba5 56 SUPERFAMILY SSF54862 1 53 1.08E-18 T 25-04-2017 CLFO_RS01880 43bb55ff2417fb67b5d18f859d17aba5 56 PRINTS PR00354 7Fe ferredoxin signature 33 50 4.2E-5 T 25-04-2017 IPR000813 7Fe ferredoxin GO:0009055 CLFO_RS01880 43bb55ff2417fb67b5d18f859d17aba5 56 PRINTS PR00354 7Fe ferredoxin signature 17 27 4.2E-5 T 25-04-2017 IPR000813 7Fe ferredoxin GO:0009055 CLFO_RS01880 43bb55ff2417fb67b5d18f859d17aba5 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS01880 43bb55ff2417fb67b5d18f859d17aba5 56 Gene3D G3DSA:3.30.70.20 3 53 4.2E-18 T 25-04-2017 CLFO_RS01880 43bb55ff2417fb67b5d18f859d17aba5 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS01880 43bb55ff2417fb67b5d18f859d17aba5 56 Pfam PF12838 4Fe-4S dicluster domain 8 52 1.4E-10 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS11290 16f42961efa1cf566a32f1e2b88f4f97 332 Pfam PF02504 Fatty acid synthesis protein 1 320 9.7E-118 T 25-04-2017 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CLFO_RS11290 16f42961efa1cf566a32f1e2b88f4f97 332 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 332 144.141 T 25-04-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CLFO_RS11290 16f42961efa1cf566a32f1e2b88f4f97 332 SUPERFAMILY SSF53659 1 328 9.46E-101 T 25-04-2017 CLFO_RS11290 16f42961efa1cf566a32f1e2b88f4f97 332 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 328 2.0E-115 T 25-04-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CLFO_RS11290 16f42961efa1cf566a32f1e2b88f4f97 332 PIRSF PIRSF002465 1 332 1.9E-124 T 25-04-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CLFO_RS11290 16f42961efa1cf566a32f1e2b88f4f97 332 Gene3D G3DSA:3.40.718.10 1 326 3.1E-132 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS15830 13626470207d2b10ac2cb16416230ec4 391 SUPERFAMILY SSF53383 23 389 1.93E-100 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS15830 13626470207d2b10ac2cb16416230ec4 391 Gene3D G3DSA:3.90.1150.10 282 388 4.3E-27 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS15830 13626470207d2b10ac2cb16416230ec4 391 PIRSF PIRSF000390 22 391 5.0E-97 T 25-04-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLFO_RS15830 13626470207d2b10ac2cb16416230ec4 391 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 25 385 6.8E-164 T 25-04-2017 IPR026385 Aminotransferase, LLPSF_NHT_00031 family CLFO_RS15830 13626470207d2b10ac2cb16416230ec4 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 36 389 4.6E-92 T 25-04-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLFO_RS15830 13626470207d2b10ac2cb16416230ec4 391 Gene3D G3DSA:3.40.640.10 24 280 3.7E-88 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS13715 4b479cd00bb9d082a431f824b1d88900 509 SMART SM00345 20 79 1.0E-15 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS13715 4b479cd00bb9d082a431f824b1d88900 509 Gene3D G3DSA:3.90.1150.10 370 489 8.7E-14 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS13715 4b479cd00bb9d082a431f824b1d88900 509 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 9.1E-16 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS13715 4b479cd00bb9d082a431f824b1d88900 509 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 1.7E-7 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS13715 4b479cd00bb9d082a431f824b1d88900 509 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 1.7E-7 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS13715 4b479cd00bb9d082a431f824b1d88900 509 Pfam PF00155 Aminotransferase class I and II 127 483 4.5E-30 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS13715 4b479cd00bb9d082a431f824b1d88900 509 Gene3D G3DSA:3.40.640.10 165 369 8.4E-69 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS13715 4b479cd00bb9d082a431f824b1d88900 509 SUPERFAMILY SSF53383 98 489 1.87E-96 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS13715 4b479cd00bb9d082a431f824b1d88900 509 Gene3D G3DSA:1.10.10.10 8 79 1.6E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13715 4b479cd00bb9d082a431f824b1d88900 509 SUPERFAMILY SSF46785 9 81 1.36E-19 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS01685 11be00a1d91be418c089cabce95df49d 341 SUPERFAMILY SSF75620 5 337 2.22E-131 T 25-04-2017 CLFO_RS01685 11be00a1d91be418c089cabce95df49d 341 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 337 5.5E-151 T 25-04-2017 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CLFO_RS01685 11be00a1d91be418c089cabce95df49d 341 Pfam PF00472 RF-1 domain 202 311 2.4E-42 T 25-04-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLFO_RS01685 11be00a1d91be418c089cabce95df49d 341 Gene3D G3DSA:1.20.58.410 2 88 4.0E-17 T 25-04-2017 CLFO_RS01685 11be00a1d91be418c089cabce95df49d 341 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 218 234 - T 25-04-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLFO_RS01685 11be00a1d91be418c089cabce95df49d 341 Pfam PF03462 PCRF domain 7 193 5.9E-58 T 25-04-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CLFO_RS01685 11be00a1d91be418c089cabce95df49d 341 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 339 36.554 T 25-04-2017 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 CLFO_RS01685 11be00a1d91be418c089cabce95df49d 341 Gene3D G3DSA:3.30.160.20 201 279 3.8E-38 T 25-04-2017 IPR014720 Double-stranded RNA-binding domain CLFO_RS01685 11be00a1d91be418c089cabce95df49d 341 SMART SM00937 59 168 8.3E-42 T 25-04-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CLFO_RS08490 6949a535ecea8eb68737679c7cccb6ba 95 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 86 8.0E-21 T 25-04-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 CLFO_RS08490 6949a535ecea8eb68737679c7cccb6ba 95 Pfam PF03776 Septum formation topological specificity factor MinE 14 86 2.4E-24 T 25-04-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 CLFO_RS08490 6949a535ecea8eb68737679c7cccb6ba 95 Gene3D G3DSA:3.30.1070.10 30 91 1.3E-19 T 25-04-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 CLFO_RS08490 6949a535ecea8eb68737679c7cccb6ba 95 SUPERFAMILY SSF55229 31 89 6.8E-11 T 25-04-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 CLFO_RS08490 6949a535ecea8eb68737679c7cccb6ba 95 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 90 15.808 T 25-04-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 CLFO_RS14725 07a13ae511c6666f7a824fb53011c23c 335 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 319 7.4E-75 T 25-04-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CLFO_RS14725 07a13ae511c6666f7a824fb53011c23c 335 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 43 297 4.6E-53 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS14725 07a13ae511c6666f7a824fb53011c23c 335 PIRSF PIRSF006470 6 330 3.3E-72 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS14115 1579135e5f34221504a1cff34e908a89 65 SUPERFAMILY SSF54285 1 65 1.57E-10 T 25-04-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLFO_RS14115 1579135e5f34221504a1cff34e908a89 65 Gene3D G3DSA:3.10.20.30 1 65 5.4E-13 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS14115 1579135e5f34221504a1cff34e908a89 65 Pfam PF02597 ThiS family 7 65 1.1E-6 T 25-04-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CLFO_RS14115 1579135e5f34221504a1cff34e908a89 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 3.9E-11 T 25-04-2017 IPR010035 ThiS, thiamine-biosynthesis CLFO_RS20835 705970611ffe5e98796444799b74aef7 178 Gene3D G3DSA:1.10.10.10 108 164 3.6E-8 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20835 705970611ffe5e98796444799b74aef7 178 SUPERFAMILY SSF88659 101 165 3.18E-8 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20835 705970611ffe5e98796444799b74aef7 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 163 1.3E-20 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20835 705970611ffe5e98796444799b74aef7 178 Gene3D G3DSA:1.10.1740.10 1 103 2.0E-23 T 25-04-2017 CLFO_RS20835 705970611ffe5e98796444799b74aef7 178 Pfam PF04542 Sigma-70 region 2 23 86 4.4E-14 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20835 705970611ffe5e98796444799b74aef7 178 Pfam PF08281 Sigma-70, region 4 110 160 3.0E-9 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20835 705970611ffe5e98796444799b74aef7 178 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 43 73 - T 25-04-2017 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20835 705970611ffe5e98796444799b74aef7 178 SUPERFAMILY SSF88946 1 91 5.89E-21 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS17675 ae57b72dded613dff7706dae0f676249 184 SUPERFAMILY SSF55383 29 80 1.57E-8 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS17675 ae57b72dded613dff7706dae0f676249 184 Pfam PF07833 Copper amine oxidase N-terminal domain 33 83 1.1E-7 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS17675 ae57b72dded613dff7706dae0f676249 184 Gene3D G3DSA:3.30.457.10 33 72 7.4E-6 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS13230 0b0009ffc88e9af9aa39e3f802b0c2b0 138 Gene3D G3DSA:1.20.1290.10 16 134 5.5E-11 T 25-04-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 CLFO_RS13230 0b0009ffc88e9af9aa39e3f802b0c2b0 138 SUPERFAMILY SSF69118 15 134 9.6E-19 T 25-04-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 276 4.7E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 Gene3D G3DSA:1.10.287.130 201 273 2.5E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 SUPERFAMILY SSF55874 267 429 9.69E-41 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 SMART SM00304 158 210 2.2E-11 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 429 1.4E-25 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 SUPERFAMILY SSF47384 194 277 8.63E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 SMART SM00388 211 277 1.1E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.7E-14 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 1.7E-14 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 1.7E-14 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.7E-14 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 Pfam PF00672 HAMP domain 139 206 1.6E-16 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 SUPERFAMILY SSF158472 159 207 3.53E-12 T 25-04-2017 CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 Gene3D G3DSA:3.30.565.10 283 429 2.0E-40 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS12305 3b7e80aec8e130bcbb875fa575120c0c 429 SMART SM00387 321 429 9.2E-31 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 Gene3D G3DSA:1.10.8.60 501 553 2.0E-21 T 25-04-2017 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 Gene3D G3DSA:1.10.10.60 554 631 8.8E-15 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 SUPERFAMILY SSF52540 331 570 4.41E-69 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 197 308 2.2E-10 T 25-04-2017 IPR000014 PAS domain CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 602 619 7.6E-5 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 619 634 7.6E-5 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 541 550 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 Pfam PF02954 Bacterial regulatory protein, Fis family 596 629 7.6E-7 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 Pfam PF00989 PAS fold 201 252 4.0E-8 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 Gene3D G3DSA:3.40.50.10660 76 159 3.0E-10 T 25-04-2017 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 SUPERFAMILY SSF55785 200 269 1.05E-14 T 25-04-2017 IPR000014 PAS domain CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 SUPERFAMILY SSF46689 541 631 6.66E-9 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 SUPERFAMILY SSF159800 3 191 1.44E-42 T 25-04-2017 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 Gene3D G3DSA:3.30.450.20 197 253 4.6E-15 T 25-04-2017 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 Gene3D G3DSA:3.40.50.300 324 500 4.4E-54 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 SMART SM00091 200 266 3.1E-7 T 25-04-2017 IPR000014 PAS domain CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 351 364 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 Pfam PF06506 Propionate catabolism activator 26 195 5.7E-42 T 25-04-2017 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 SMART SM00382 347 495 1.4E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 414 429 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 Pfam PF00158 Sigma-54 interaction domain 329 494 2.7E-68 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 Gene3D G3DSA:3.40.50.2300 3 75 1.2E-21 T 25-04-2017 CLFO_RS09975 30e9d7e8125b2332c85b1b1d3799fee4 634 Gene3D G3DSA:3.40.50.2300 173 196 1.2E-21 T 25-04-2017 CLFO_RS12765 164e7d12354308a328e8388fd89e84dc 444 Pfam PF00120 Glutamine synthetase, catalytic domain 106 440 3.7E-136 T 25-04-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS12765 164e7d12354308a328e8388fd89e84dc 444 Gene3D G3DSA:3.10.20.70 7 108 2.1E-40 T 25-04-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS12765 164e7d12354308a328e8388fd89e84dc 444 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 25-04-2017 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CLFO_RS12765 164e7d12354308a328e8388fd89e84dc 444 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 441 7.1E-171 T 25-04-2017 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS12765 164e7d12354308a328e8388fd89e84dc 444 SMART SM01230 105 354 8.4E-136 T 25-04-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS12765 164e7d12354308a328e8388fd89e84dc 444 SUPERFAMILY SSF55931 105 441 2.65E-127 T 25-04-2017 CLFO_RS12765 164e7d12354308a328e8388fd89e84dc 444 SUPERFAMILY SSF54368 7 104 2.88E-32 T 25-04-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS12765 164e7d12354308a328e8388fd89e84dc 444 Gene3D G3DSA:3.30.590.10 109 431 7.7E-125 T 25-04-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CLFO_RS12765 164e7d12354308a328e8388fd89e84dc 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 19 99 5.7E-32 T 25-04-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 354 49.15 T 25-04-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 Pfam PF00117 Glutamine amidotransferase class-I 173 348 3.4E-51 T 25-04-2017 IPR017926 Glutamine amidotransferase CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 240 251 6.7E-13 T 25-04-2017 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 325 338 6.7E-13 T 25-04-2017 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 213 222 6.7E-13 T 25-04-2017 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 Gene3D G3DSA:3.40.50.880 140 352 2.0E-70 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 SUPERFAMILY SSF52317 134 351 2.82E-60 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 3 350 6.7E-150 T 25-04-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 SMART SM01097 1 131 1.1E-92 T 25-04-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 9.1E-55 T 25-04-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 210 224 9.2E-37 T 25-04-2017 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 240 256 9.2E-37 T 25-04-2017 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 257 274 9.2E-37 T 25-04-2017 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 293 9.2E-37 T 25-04-2017 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 171 185 9.2E-37 T 25-04-2017 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 SUPERFAMILY SSF52021 1 146 6.54E-59 T 25-04-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 Gene3D G3DSA:3.50.30.20 1 139 2.3E-62 T 25-04-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 PRINTS PR00097 Anthranilate synthase component II signature 240 251 1.3E-7 T 25-04-2017 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 PRINTS PR00097 Anthranilate synthase component II signature 325 338 1.3E-7 T 25-04-2017 CLFO_RS18045 5a025f44547535c0d544dc025931ecc5 361 PRINTS PR00097 Anthranilate synthase component II signature 213 222 1.3E-7 T 25-04-2017 CLFO_RS18030 2faf9c816ba2934d039a48a54d479934 306 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 300 1.8E-119 T 25-04-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CLFO_RS18030 2faf9c816ba2934d039a48a54d479934 306 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 240 260 - T 25-04-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CLFO_RS18030 2faf9c816ba2934d039a48a54d479934 306 Pfam PF01180 Dihydroorotate dehydrogenase 6 287 1.6E-79 T 25-04-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CLFO_RS18030 2faf9c816ba2934d039a48a54d479934 306 Gene3D G3DSA:3.20.20.70 3 302 8.4E-96 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS18030 2faf9c816ba2934d039a48a54d479934 306 PIRSF PIRSF000164 1 304 1.9E-84 T 25-04-2017 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CLFO_RS18030 2faf9c816ba2934d039a48a54d479934 306 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 6 302 41.842 T 25-04-2017 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 CLFO_RS18030 2faf9c816ba2934d039a48a54d479934 306 SUPERFAMILY SSF51395 3 302 5.86E-90 T 25-04-2017 CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 Gene3D G3DSA:1.10.287.130 244 306 1.2E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 Gene3D G3DSA:3.30.565.10 307 475 1.0E-47 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 SUPERFAMILY SSF47384 237 320 1.88E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 SMART SM00388 254 321 2.3E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 Pfam PF00672 HAMP domain 181 249 3.1E-14 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 319 1.6E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 SUPERFAMILY SSF55874 311 474 3.67E-43 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 SMART SM00304 200 253 1.8E-13 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 473 1.9E-25 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 SUPERFAMILY SSF158472 200 250 2.35E-8 T 25-04-2017 CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 SMART SM00387 364 476 1.4E-36 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 5.9E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 5.9E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 5.9E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS04020 02def430ac9fcc1b1b8145ceea428ecc 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 473 5.9E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS04945 6545a1b2e194cdba4fd5d9bb076ab662 257 Pfam PF13938 Putative heavy-metal chelation 11 92 2.2E-11 T 25-04-2017 IPR025251 Domain of unknown function DUF4213 CLFO_RS04945 6545a1b2e194cdba4fd5d9bb076ab662 257 Pfam PF04016 Putative heavy-metal chelation 110 253 8.3E-35 T 25-04-2017 IPR007161 Putative heavy-metal chelation domain CLFO_RS04945 6545a1b2e194cdba4fd5d9bb076ab662 257 SUPERFAMILY SSF159713 8 248 9.29E-42 T 25-04-2017 CLFO_RS07280 2813c2696563e0bda842c187f5c31731 205 Pfam PF01381 Helix-turn-helix 7 61 6.6E-18 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS07280 2813c2696563e0bda842c187f5c31731 205 Gene3D G3DSA:1.10.260.40 1 64 1.1E-23 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS07280 2813c2696563e0bda842c187f5c31731 205 SUPERFAMILY SSF47413 1 63 1.61E-20 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS07280 2813c2696563e0bda842c187f5c31731 205 SMART SM00530 69 125 36.0 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS07280 2813c2696563e0bda842c187f5c31731 205 SMART SM00530 6 61 1.2E-19 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS15125 6a9ea5c560a4a3afe232ce4c6fcd2a87 253 Gene3D G3DSA:3.40.50.300 1 231 2.9E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15125 6a9ea5c560a4a3afe232ce4c6fcd2a87 253 SUPERFAMILY SSF52540 7 230 3.59E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15125 6a9ea5c560a4a3afe232ce4c6fcd2a87 253 Pfam PF00005 ABC transporter 23 165 3.4E-33 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15125 6a9ea5c560a4a3afe232ce4c6fcd2a87 253 SMART SM00382 31 222 3.4E-13 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS05325 a5f6ee8ed4585d651e65fdab8a8e5a29 363 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 241 313 4.1E-10 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS05325 a5f6ee8ed4585d651e65fdab8a8e5a29 363 Pfam PF01385 Probable transposase 159 272 7.1E-23 T 25-04-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 CLFO_RS05325 a5f6ee8ed4585d651e65fdab8a8e5a29 363 Pfam PF07282 Putative transposase DNA-binding domain 286 355 3.1E-22 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS05325 a5f6ee8ed4585d651e65fdab8a8e5a29 363 Pfam PF12323 Helix-turn-helix domain 2 45 2.3E-22 T 25-04-2017 IPR021027 Transposase, putative, helix-turn-helix domain CLFO_RS02745 1f8b254e018343370e9cc16d5742bc40 127 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 9.9E-5 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS02745 1f8b254e018343370e9cc16d5742bc40 127 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 9.9E-5 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS02745 1f8b254e018343370e9cc16d5742bc40 127 SUPERFAMILY SSF46785 5 101 6.65E-22 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS02745 1f8b254e018343370e9cc16d5742bc40 127 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 1.5E-16 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS02745 1f8b254e018343370e9cc16d5742bc40 127 SMART SM00345 16 75 3.1E-16 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS02745 1f8b254e018343370e9cc16d5742bc40 127 Gene3D G3DSA:1.10.10.10 1 76 1.1E-27 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS01175 1770588077097d71f972cd02cbf27978 339 PRINTS PR01713 Nucleotide sugar epimerase signature 258 273 2.0E-29 T 25-04-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CLFO_RS01175 1770588077097d71f972cd02cbf27978 339 PRINTS PR01713 Nucleotide sugar epimerase signature 218 233 2.0E-29 T 25-04-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CLFO_RS01175 1770588077097d71f972cd02cbf27978 339 PRINTS PR01713 Nucleotide sugar epimerase signature 31 47 2.0E-29 T 25-04-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CLFO_RS01175 1770588077097d71f972cd02cbf27978 339 PRINTS PR01713 Nucleotide sugar epimerase signature 297 314 2.0E-29 T 25-04-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CLFO_RS01175 1770588077097d71f972cd02cbf27978 339 Gene3D G3DSA:3.90.25.10 186 336 5.3E-31 T 25-04-2017 CLFO_RS01175 1770588077097d71f972cd02cbf27978 339 SUPERFAMILY SSF51735 1 335 1.25E-95 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01175 1770588077097d71f972cd02cbf27978 339 Gene3D G3DSA:3.40.50.720 3 185 4.3E-55 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01175 1770588077097d71f972cd02cbf27978 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 325 1.1E-58 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14880 76c113534863acbbe55cf66d4224ced2 80 Gene3D G3DSA:3.90.1340.10 1 62 3.3E-26 T 25-04-2017 IPR011083 Phage tail collar domain CLFO_RS14880 76c113534863acbbe55cf66d4224ced2 80 SUPERFAMILY SSF88874 2 62 1.7E-24 T 25-04-2017 CLFO_RS14880 76c113534863acbbe55cf66d4224ced2 80 Pfam PF07484 Phage Tail Collar Domain 6 60 1.0E-24 T 25-04-2017 IPR011083 Phage tail collar domain CLFO_RS20675 4f23667233f0f298f4a565803844c8bc 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 241 1.7E-13 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS20675 4f23667233f0f298f4a565803844c8bc 264 SUPERFAMILY SSF161098 57 242 1.7E-21 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS20675 4f23667233f0f298f4a565803844c8bc 264 Gene3D G3DSA:1.10.3720.10 58 242 7.3E-18 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12875 8a82736b35667f6bb28029d1a60e5446 502 PIRSF PIRSF033132 1 502 2.0E-272 T 25-04-2017 IPR014999 Uncharacterised protein family UPF0371 CLFO_RS12875 8a82736b35667f6bb28029d1a60e5446 502 Pfam PF08903 Domain of unknown function (DUF1846) 3 499 1.5E-241 T 25-04-2017 IPR014999 Uncharacterised protein family UPF0371 CLFO_RS12875 8a82736b35667f6bb28029d1a60e5446 502 Hamap MF_01567 UPF0371 protein . 1 502 60.051 T 25-04-2017 IPR014999 Uncharacterised protein family UPF0371 CLFO_RS12875 8a82736b35667f6bb28029d1a60e5446 502 Gene3D G3DSA:1.20.1570.10 282 339 5.8E-48 T 25-04-2017 CLFO_RS12875 8a82736b35667f6bb28029d1a60e5446 502 Gene3D G3DSA:1.20.1570.10 206 244 5.8E-48 T 25-04-2017 CLFO_RS12875 8a82736b35667f6bb28029d1a60e5446 502 Gene3D G3DSA:3.10.630.10 1 205 1.4E-120 T 25-04-2017 CLFO_RS12875 8a82736b35667f6bb28029d1a60e5446 502 Gene3D G3DSA:3.10.630.10 251 281 1.4E-120 T 25-04-2017 CLFO_RS07545 0c74c21e024d3190a18c17a4ef078dfc 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 180 5.4E-38 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07545 0c74c21e024d3190a18c17a4ef078dfc 191 SUPERFAMILY SSF88659 121 182 5.98E-18 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07545 0c74c21e024d3190a18c17a4ef078dfc 191 Pfam PF04542 Sigma-70 region 2 23 90 5.7E-20 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07545 0c74c21e024d3190a18c17a4ef078dfc 191 Gene3D G3DSA:1.10.10.10 121 185 6.3E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS07545 0c74c21e024d3190a18c17a4ef078dfc 191 SUPERFAMILY SSF88946 4 101 2.04E-29 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07545 0c74c21e024d3190a18c17a4ef078dfc 191 Gene3D G3DSA:1.10.1740.10 3 108 5.3E-33 T 25-04-2017 CLFO_RS07545 0c74c21e024d3190a18c17a4ef078dfc 191 Pfam PF08281 Sigma-70, region 4 128 179 1.9E-20 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20550 34de91381674748b126627d4539f49ac 518 SMART SM00382 349 518 2.3E-8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS20550 34de91381674748b126627d4539f49ac 518 SMART SM00382 28 236 4.3E-7 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS20550 34de91381674748b126627d4539f49ac 518 Pfam PF00005 ABC transporter 20 191 2.8E-27 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS20550 34de91381674748b126627d4539f49ac 518 Pfam PF00005 ABC transporter 341 469 1.5E-20 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS20550 34de91381674748b126627d4539f49ac 518 Gene3D G3DSA:3.40.50.300 2 90 7.1E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20550 34de91381674748b126627d4539f49ac 518 Gene3D G3DSA:3.40.50.300 124 280 7.1E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20550 34de91381674748b126627d4539f49ac 518 Gene3D G3DSA:3.40.50.300 326 508 6.9E-33 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20550 34de91381674748b126627d4539f49ac 518 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS20550 34de91381674748b126627d4539f49ac 518 SUPERFAMILY SSF52540 4 245 4.75E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20550 34de91381674748b126627d4539f49ac 518 SUPERFAMILY SSF52540 308 507 1.51E-34 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20550 34de91381674748b126627d4539f49ac 518 Pfam PF12848 ABC transporter 230 315 1.1E-21 T 25-04-2017 IPR032781 ABC-transporter extension domain CLFO_RS20550 34de91381674748b126627d4539f49ac 518 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 SUPERFAMILY SSF53448 3 238 8.35E-74 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 SUPERFAMILY SSF53448 266 277 8.35E-74 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 Gene3D G3DSA:3.30.310.50 737 819 1.5E-12 T 25-04-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 252 284 4.1E-6 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 321 355 6.0E-5 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 Gene3D G3DSA:3.40.120.10 384 529 4.0E-19 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 SUPERFAMILY SSF55957 733 820 2.62E-13 T 25-04-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 SUPERFAMILY SSF51161 239 415 1.06E-26 T 25-04-2017 IPR011004 Trimeric LpxA-like CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 Pfam PF00483 Nucleotidyl transferase 5 234 1.8E-50 T 25-04-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 385 516 8.4E-21 T 25-04-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 Gene3D G3DSA:3.40.120.10 630 695 2.1E-4 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 Gene3D G3DSA:3.90.550.10 4 235 1.2E-70 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 Gene3D G3DSA:2.160.10.10 236 373 6.3E-21 T 25-04-2017 CLFO_RS02720 f0e9773b4887525b29e5f4e2ebe226e1 823 SUPERFAMILY SSF53738 378 518 1.33E-20 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18155 f119ed4066f880aaaab29a6e88c92538 223 Pfam PF08279 HTH domain 169 205 1.9E-5 T 25-04-2017 IPR013196 Helix-turn-helix, type 11 CLFO_RS18155 f119ed4066f880aaaab29a6e88c92538 223 PIRSF PIRSF006171 1 223 4.3E-76 T 25-04-2017 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CLFO_RS18155 f119ed4066f880aaaab29a6e88c92538 223 Gene3D G3DSA:3.40.50.2300 1 124 8.6E-35 T 25-04-2017 CLFO_RS18155 f119ed4066f880aaaab29a6e88c92538 223 SMART SM00448 2 115 3.5E-30 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18155 f119ed4066f880aaaab29a6e88c92538 223 SUPERFAMILY SSF46785 157 204 5.67E-6 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18155 f119ed4066f880aaaab29a6e88c92538 223 Gene3D G3DSA:1.10.10.10 157 202 7.9E-6 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18155 f119ed4066f880aaaab29a6e88c92538 223 Pfam PF00072 Response regulator receiver domain 4 115 2.6E-29 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18155 f119ed4066f880aaaab29a6e88c92538 223 SUPERFAMILY SSF52172 1 127 1.71E-36 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS20465 53275ab10efc3afba75d73185d6cb62f 504 SUPERFAMILY SSF50022 384 504 2.23E-26 T 25-04-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CLFO_RS20465 53275ab10efc3afba75d73185d6cb62f 504 Gene3D G3DSA:2.102.10.10 406 504 4.4E-33 T 25-04-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CLFO_RS20465 53275ab10efc3afba75d73185d6cb62f 504 SUPERFAMILY SSF51971 31 261 1.88E-31 T 25-04-2017 CLFO_RS20465 53275ab10efc3afba75d73185d6cb62f 504 SUPERFAMILY SSF51971 322 384 1.88E-31 T 25-04-2017 CLFO_RS20465 53275ab10efc3afba75d73185d6cb62f 504 Gene3D G3DSA:3.50.50.60 337 396 1.1E-40 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS20465 53275ab10efc3afba75d73185d6cb62f 504 Gene3D G3DSA:3.50.50.60 18 121 1.1E-40 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS20465 53275ab10efc3afba75d73185d6cb62f 504 Gene3D G3DSA:3.50.50.60 169 250 1.1E-40 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS20465 53275ab10efc3afba75d73185d6cb62f 504 PRINTS PR00162 Rieske 2Fe-2S subunit signature 455 466 8.8E-6 T 25-04-2017 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CLFO_RS20465 53275ab10efc3afba75d73185d6cb62f 504 PRINTS PR00162 Rieske 2Fe-2S subunit signature 488 500 8.8E-6 T 25-04-2017 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CLFO_RS20465 53275ab10efc3afba75d73185d6cb62f 504 PRINTS PR00162 Rieske 2Fe-2S subunit signature 476 488 8.8E-6 T 25-04-2017 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CLFO_RS20465 53275ab10efc3afba75d73185d6cb62f 504 Pfam PF00355 Rieske [2Fe-2S] domain 421 504 1.1E-14 T 25-04-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CLFO_RS20465 53275ab10efc3afba75d73185d6cb62f 504 Pfam PF01266 FAD dependent oxidoreductase 32 376 1.1E-38 T 25-04-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CLFO_RS03225 05a079a6431434442d18e602544b09bc 159 Pfam PF12801 4Fe-4S binding domain 27 74 0.001 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS03225 05a079a6431434442d18e602544b09bc 159 Pfam PF12801 4Fe-4S binding domain 87 99 210.0 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS03225 05a079a6431434442d18e602544b09bc 159 Pfam PF12801 4Fe-4S binding domain 120 156 0.11 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS03910 36edacc2ddc6acd77eddcc57751d86e3 113 Pfam PF12732 YtxH-like protein 3 87 5.5E-15 T 25-04-2017 IPR024623 Uncharacterised protein family YtxH CLFO_RS03910 36edacc2ddc6acd77eddcc57751d86e3 113 SUPERFAMILY SSF58113 25 91 6.28E-7 T 25-04-2017 CLFO_RS03910 36edacc2ddc6acd77eddcc57751d86e3 113 Gene3D G3DSA:1.20.120.20 26 91 3.8E-6 T 25-04-2017 CLFO_RS03195 09630d463ca4fe5c2645d56d5dc607f6 438 SUPERFAMILY SSF111369 66 141 2.35E-6 T 25-04-2017 CLFO_RS03195 09630d463ca4fe5c2645d56d5dc607f6 438 SUPERFAMILY SSF111369 180 188 1.01E-11 T 25-04-2017 CLFO_RS03195 09630d463ca4fe5c2645d56d5dc607f6 438 SUPERFAMILY SSF111369 229 360 1.01E-11 T 25-04-2017 CLFO_RS03195 09630d463ca4fe5c2645d56d5dc607f6 438 Gene3D G3DSA:2.40.50.100 250 282 3.2E-15 T 25-04-2017 CLFO_RS03195 09630d463ca4fe5c2645d56d5dc607f6 438 Gene3D G3DSA:2.40.50.100 75 109 3.2E-15 T 25-04-2017 CLFO_RS03195 09630d463ca4fe5c2645d56d5dc607f6 438 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 217 435 9.7E-43 T 25-04-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CLFO_RS03195 09630d463ca4fe5c2645d56d5dc607f6 438 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 356 5.1E-27 T 25-04-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLFO_RS09325 0b25ae839b5fbe992d1486c6bfab1938 199 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 36 180 2.0E-34 T 25-04-2017 IPR005642 Lysine exporter LysO CLFO_RS09325 0b25ae839b5fbe992d1486c6bfab1938 199 Pfam PF03956 Membrane protein of unknown function (DUF340) 7 194 2.8E-59 T 25-04-2017 IPR005642 Lysine exporter LysO CLFO_RS01805 af61de0c019f8de5a3b912f1fe6d4b19 598 Pfam PF00350 Dynamin family 54 213 2.4E-28 T 25-04-2017 IPR022812 Dynamin superfamily CLFO_RS01805 af61de0c019f8de5a3b912f1fe6d4b19 598 Gene3D G3DSA:3.40.50.300 26 63 9.8E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01805 af61de0c019f8de5a3b912f1fe6d4b19 598 Gene3D G3DSA:3.40.50.300 125 154 9.8E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01805 af61de0c019f8de5a3b912f1fe6d4b19 598 SUPERFAMILY SSF52540 38 238 2.14E-29 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01805 af61de0c019f8de5a3b912f1fe6d4b19 598 Gene3D G3DSA:3.40.50.300 64 96 4.0E-19 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01805 af61de0c019f8de5a3b912f1fe6d4b19 598 Gene3D G3DSA:3.40.50.300 155 244 4.0E-19 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07255 6ecc2af17b133ac1259851757ab4ad40 299 Gene3D G3DSA:1.10.10.10 1 85 6.3E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS07255 6ecc2af17b133ac1259851757ab4ad40 299 Gene3D G3DSA:3.40.190.10 90 170 1.5E-15 T 25-04-2017 CLFO_RS07255 6ecc2af17b133ac1259851757ab4ad40 299 SUPERFAMILY SSF53850 89 298 1.6E-35 T 25-04-2017 CLFO_RS07255 6ecc2af17b133ac1259851757ab4ad40 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-18 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS07255 6ecc2af17b133ac1259851757ab4ad40 299 Pfam PF03466 LysR substrate binding domain 88 296 6.3E-38 T 25-04-2017 IPR005119 LysR, substrate-binding CLFO_RS07255 6ecc2af17b133ac1259851757ab4ad40 299 Gene3D G3DSA:3.40.190.10 171 265 2.4E-15 T 25-04-2017 CLFO_RS07255 6ecc2af17b133ac1259851757ab4ad40 299 SUPERFAMILY SSF46785 1 86 1.21E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS07255 6ecc2af17b133ac1259851757ab4ad40 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.0E-6 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS07255 6ecc2af17b133ac1259851757ab4ad40 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.0E-6 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS07255 6ecc2af17b133ac1259851757ab4ad40 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.0E-6 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS00110 3d2b9691054a144177c13e68245a5374 282 SUPERFAMILY SSF51690 112 279 1.41E-59 T 25-04-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CLFO_RS00110 3d2b9691054a144177c13e68245a5374 282 PIRSF PIRSF006250 5 281 3.0E-103 T 25-04-2017 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CLFO_RS00110 3d2b9691054a144177c13e68245a5374 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 112 276 1.0E-62 T 25-04-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CLFO_RS00110 3d2b9691054a144177c13e68245a5374 282 SUPERFAMILY SSF54675 4 111 1.15E-31 T 25-04-2017 CLFO_RS00110 3d2b9691054a144177c13e68245a5374 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 110 2.2E-28 T 25-04-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CLFO_RS00110 3d2b9691054a144177c13e68245a5374 282 Gene3D G3DSA:3.20.20.70 134 268 1.3E-60 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS00110 3d2b9691054a144177c13e68245a5374 282 Gene3D G3DSA:3.90.1170.20 4 133 2.5E-47 T 25-04-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CLFO_RS00110 3d2b9691054a144177c13e68245a5374 282 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 13 277 5.8E-106 T 25-04-2017 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CLFO_RS10810 ab5a6893871c51677cf2c31b70b99ff1 178 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 176 9.3E-54 T 25-04-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 CLFO_RS10810 ab5a6893871c51677cf2c31b70b99ff1 178 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 25-04-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLFO_RS10810 ab5a6893871c51677cf2c31b70b99ff1 178 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 9.7E-19 T 25-04-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLFO_RS10810 ab5a6893871c51677cf2c31b70b99ff1 178 PIRSF PIRSF000847 1 178 1.1E-50 T 25-04-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 CLFO_RS07820 2d2745df76e24498d0c273376c142ba5 233 Gene3D G3DSA:3.40.1130.10 18 223 1.1E-25 T 25-04-2017 CLFO_RS07820 2d2745df76e24498d0c273376c142ba5 233 SMART SM00563 51 164 1.2E-24 T 25-04-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CLFO_RS07820 2d2745df76e24498d0c273376c142ba5 233 Pfam PF01553 Acyltransferase 36 160 1.7E-20 T 25-04-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CLFO_RS07820 2d2745df76e24498d0c273376c142ba5 233 SUPERFAMILY SSF69593 17 233 2.22E-40 T 25-04-2017 CLFO_RS11160 03a9aa94f9932279ce56672613ca1d57 259 Pfam PF06018 CodY GAF-like domain 4 179 4.6E-64 T 25-04-2017 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 CLFO_RS11160 03a9aa94f9932279ce56672613ca1d57 259 PIRSF PIRSF011572 1 258 2.8E-115 T 25-04-2017 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 CLFO_RS11160 03a9aa94f9932279ce56672613ca1d57 259 Gene3D G3DSA:1.10.10.10 191 245 8.4E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS11160 03a9aa94f9932279ce56672613ca1d57 259 Pfam PF08222 CodY helix-turn-helix domain 199 258 7.0E-34 T 25-04-2017 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal CLFO_RS11160 03a9aa94f9932279ce56672613ca1d57 259 SUPERFAMILY SSF46785 168 257 9.3E-42 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS11160 03a9aa94f9932279ce56672613ca1d57 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 134.915 T 25-04-2017 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 CLFO_RS11160 03a9aa94f9932279ce56672613ca1d57 259 SUPERFAMILY SSF55781 90 167 3.3E-5 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS11160 03a9aa94f9932279ce56672613ca1d57 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 5 254 1.5E-112 T 25-04-2017 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 CLFO_RS12775 6168e868086d743b66704a1cc5667028 490 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 479 92.187 T 25-04-2017 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLFO_RS12775 6168e868086d743b66704a1cc5667028 490 ProSitePatterns PS00571 Amidases signature. 152 183 - T 25-04-2017 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CLFO_RS12775 6168e868086d743b66704a1cc5667028 490 PIRSF PIRSF001221 1 451 2.3E-44 T 25-04-2017 CLFO_RS12775 6168e868086d743b66704a1cc5667028 490 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 15 479 4.6E-193 T 25-04-2017 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLFO_RS12775 6168e868086d743b66704a1cc5667028 490 Gene3D G3DSA:3.90.1300.10 2 483 2.2E-183 T 25-04-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLFO_RS12775 6168e868086d743b66704a1cc5667028 490 Pfam PF01425 Amidase 24 468 6.2E-164 T 25-04-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLFO_RS12775 6168e868086d743b66704a1cc5667028 490 SUPERFAMILY SSF75304 1 481 4.19E-166 T 25-04-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 Gene3D G3DSA:3.30.420.40 181 338 5.3E-46 T 25-04-2017 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 Hamap MF_00542 Probable butyrate kinase [buk]. 1 365 152.03 T 25-04-2017 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 SUPERFAMILY SSF53067 5 173 4.75E-64 T 25-04-2017 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 PIRSF PIRSF036458 2 355 3.4E-153 T 25-04-2017 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 PRINTS PR00471 Acetate kinase family signature 5 16 4.3E-18 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 PRINTS PR00471 Acetate kinase family signature 179 200 4.3E-18 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 PRINTS PR00471 Acetate kinase family signature 273 286 4.3E-18 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 PRINTS PR00471 Acetate kinase family signature 296 312 4.3E-18 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 SUPERFAMILY SSF53067 118 345 4.37E-48 T 25-04-2017 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 Gene3D G3DSA:3.30.420.40 5 180 1.5E-74 T 25-04-2017 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 Pfam PF00871 Acetokinase family 5 341 1.2E-63 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 5 352 1.9E-153 T 25-04-2017 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLFO_RS18890 69bb1b728fb6aba907fceb8de8f4b57c 365 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 25-04-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS04390 ebbd58fb33cd6978c586ea77656b0b86 248 Gene3D G3DSA:3.30.70.20 5 68 2.6E-13 T 25-04-2017 CLFO_RS04390 ebbd58fb33cd6978c586ea77656b0b86 248 Pfam PF12837 4Fe-4S binding domain 6 29 8.5E-7 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS04390 ebbd58fb33cd6978c586ea77656b0b86 248 SUPERFAMILY SSF54862 3 101 2.49E-16 T 25-04-2017 CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.9E-9 T 25-04-2017 CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.9E-9 T 25-04-2017 CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 362 384 1.9E-9 T 25-04-2017 CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 406 6.7E-137 T 25-04-2017 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 Gene3D G3DSA:3.50.50.60 355 409 2.1E-51 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 Gene3D G3DSA:3.50.50.60 4 190 2.1E-51 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 1.6E-8 T 25-04-2017 CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.6E-8 T 25-04-2017 CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 SUPERFAMILY SSF160996 192 355 1.15E-34 T 25-04-2017 CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 SUPERFAMILY SSF51905 1 190 4.78E-55 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 SUPERFAMILY SSF51905 352 410 4.78E-55 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 Pfam PF03486 HI0933-like protein 6 407 3.1E-125 T 25-04-2017 CLFO_RS18090 312a393e44149db61fff4bb49883ecfc 415 Gene3D G3DSA:2.40.30.10 192 281 7.3E-14 T 25-04-2017 CLFO_RS12425 5266a58ecd2a5a7bba9e1a23941b84de 704 Pfam PF01966 HD domain 482 625 3.7E-16 T 25-04-2017 IPR006674 HD domain CLFO_RS12425 5266a58ecd2a5a7bba9e1a23941b84de 704 TIGRFAM TIGR00277 HDIG: HDIG domain 479 578 1.1E-21 T 25-04-2017 IPR006675 HDIG domain CLFO_RS12425 5266a58ecd2a5a7bba9e1a23941b84de 704 SUPERFAMILY SSF109604 481 629 6.91E-16 T 25-04-2017 CLFO_RS12425 5266a58ecd2a5a7bba9e1a23941b84de 704 Pfam PF07698 7TM receptor with intracellular HD hydrolase 275 457 8.8E-39 T 25-04-2017 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain CLFO_RS12425 5266a58ecd2a5a7bba9e1a23941b84de 704 SMART SM00471 478 635 1.4E-12 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS12425 5266a58ecd2a5a7bba9e1a23941b84de 704 Gene3D G3DSA:1.10.3210.10 480 649 1.4E-21 T 25-04-2017 IPR006674 HD domain CLFO_RS12425 5266a58ecd2a5a7bba9e1a23941b84de 704 Pfam PF07697 7TM-HD extracellular 56 263 2.6E-40 T 25-04-2017 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain CLFO_RS02315 7aea834956ae54226091bfcc75fa94d2 584 SMART SM00304 224 279 8.4E-4 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS02315 7aea834956ae54226091bfcc75fa94d2 584 SUPERFAMILY SSF58104 314 583 8.11E-67 T 25-04-2017 CLFO_RS02315 7aea834956ae54226091bfcc75fa94d2 584 SUPERFAMILY SSF58104 254 281 8.11E-67 T 25-04-2017 CLFO_RS02315 7aea834956ae54226091bfcc75fa94d2 584 Gene3D G3DSA:1.10.287.950 323 538 4.0E-51 T 25-04-2017 CLFO_RS02315 7aea834956ae54226091bfcc75fa94d2 584 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 364 582 4.3E-47 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS02315 7aea834956ae54226091bfcc75fa94d2 584 SUPERFAMILY SSF103190 47 192 7.46E-9 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS02315 7aea834956ae54226091bfcc75fa94d2 584 SMART SM00283 308 583 6.8E-61 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS09540 f988f15cfd8b866d4d6d132cec4feb66 167 Pfam PF09419 Mitochondrial PGP phosphatase 2 134 1.5E-9 T 25-04-2017 IPR027706 Mitochondrial PGP phosphatase KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668 CLFO_RS09540 f988f15cfd8b866d4d6d132cec4feb66 167 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 27 137 4.9E-19 T 25-04-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CLFO_RS09540 f988f15cfd8b866d4d6d132cec4feb66 167 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 2 163 3.3E-49 T 25-04-2017 IPR010021 HAD-superfamily phosphatase, YqeG-like CLFO_RS09540 f988f15cfd8b866d4d6d132cec4feb66 167 SUPERFAMILY SSF56784 8 137 4.78E-24 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS09540 f988f15cfd8b866d4d6d132cec4feb66 167 Gene3D G3DSA:3.40.50.1000 23 149 1.3E-24 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS11355 59b424c4a27661a9de7353ab21ad3586 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 18.403 T 25-04-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS11355 59b424c4a27661a9de7353ab21ad3586 63 Pfam PF00830 Ribosomal L28 family 3 58 7.8E-25 T 25-04-2017 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11355 59b424c4a27661a9de7353ab21ad3586 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 1.2E-23 T 25-04-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS11355 59b424c4a27661a9de7353ab21ad3586 63 SUPERFAMILY SSF143800 1 61 9.22E-26 T 25-04-2017 CLFO_RS11355 59b424c4a27661a9de7353ab21ad3586 63 Gene3D G3DSA:4.10.1160.10 19 63 1.2E-25 T 25-04-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS02940 4c98d4454181b550dea9966dd27e4085 301 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 50 212 1.6E-22 T 25-04-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLFO_RS02940 4c98d4454181b550dea9966dd27e4085 301 SUPERFAMILY SSF52518 10 295 3.24E-69 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS02940 4c98d4454181b550dea9966dd27e4085 301 Gene3D G3DSA:3.40.50.970 12 297 4.2E-66 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS01580 bcf49bac20b0687992e49366facbc9e6 509 SUPERFAMILY SSF109604 315 504 1.92E-35 T 25-04-2017 CLFO_RS01580 bcf49bac20b0687992e49366facbc9e6 509 PIRSF PIRSF001267 1 489 3.3E-98 T 25-04-2017 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CLFO_RS01580 bcf49bac20b0687992e49366facbc9e6 509 Gene3D G3DSA:3.30.420.40 3 125 6.4E-41 T 25-04-2017 CLFO_RS01580 bcf49bac20b0687992e49366facbc9e6 509 Gene3D G3DSA:1.10.3210.10 329 456 7.1E-10 T 25-04-2017 IPR006674 HD domain CLFO_RS01580 bcf49bac20b0687992e49366facbc9e6 509 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 5 302 9.5E-96 T 25-04-2017 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CLFO_RS01580 bcf49bac20b0687992e49366facbc9e6 509 SUPERFAMILY SSF53067 129 303 1.5E-40 T 25-04-2017 CLFO_RS01580 bcf49bac20b0687992e49366facbc9e6 509 Pfam PF01966 HD domain 334 450 2.0E-6 T 25-04-2017 IPR006674 HD domain CLFO_RS01580 bcf49bac20b0687992e49366facbc9e6 509 Gene3D G3DSA:3.30.420.150 129 303 3.7E-43 T 25-04-2017 CLFO_RS01580 bcf49bac20b0687992e49366facbc9e6 509 Pfam PF02541 Ppx/GppA phosphatase family 28 302 6.5E-66 T 25-04-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CLFO_RS01580 bcf49bac20b0687992e49366facbc9e6 509 SUPERFAMILY SSF53067 5 126 7.4E-35 T 25-04-2017 CLFO_RS08305 5e24af7ae5693e263327dc6a3f5c3283 460 Pfam PF00704 Glycosyl hydrolases family 18 37 312 4.1E-44 T 25-04-2017 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 CLFO_RS08305 5e24af7ae5693e263327dc6a3f5c3283 460 SMART SM00636 36 312 5.3E-34 T 25-04-2017 IPR011583 Chitinase II GO:0004568|GO:0006032 CLFO_RS08305 5e24af7ae5693e263327dc6a3f5c3283 460 SUPERFAMILY SSF55383 369 453 7.45E-20 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS08305 5e24af7ae5693e263327dc6a3f5c3283 460 Gene3D G3DSA:3.30.457.10 370 448 1.2E-19 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS08305 5e24af7ae5693e263327dc6a3f5c3283 460 SUPERFAMILY SSF51445 300 329 1.46E-52 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS08305 5e24af7ae5693e263327dc6a3f5c3283 460 SUPERFAMILY SSF51445 33 259 1.46E-52 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS08305 5e24af7ae5693e263327dc6a3f5c3283 460 Pfam PF07833 Copper amine oxidase N-terminal domain 366 458 1.8E-24 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS08305 5e24af7ae5693e263327dc6a3f5c3283 460 Gene3D G3DSA:3.20.20.80 34 253 7.9E-57 T 25-04-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLFO_RS08305 5e24af7ae5693e263327dc6a3f5c3283 460 Gene3D G3DSA:3.20.20.80 289 330 7.9E-57 T 25-04-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLFO_RS05475 56604cf9addc26a965d53fcd652c419b 305 Pfam PF08812 YtxC-like family 71 286 4.2E-60 T 25-04-2017 IPR014199 Sporulation protein YtxC CLFO_RS02095 ac559c6c79a95cf5b36fcc9919e14922 461 Gene3D G3DSA:1.10.45.10 419 458 1.9E-11 T 25-04-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLFO_RS02095 ac559c6c79a95cf5b36fcc9919e14922 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 220 458 3.1E-50 T 25-04-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CLFO_RS02095 ac559c6c79a95cf5b36fcc9919e14922 461 Gene3D G3DSA:3.30.43.10 2 98 1.2E-23 T 25-04-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CLFO_RS02095 ac559c6c79a95cf5b36fcc9919e14922 461 SUPERFAMILY SSF55103 223 459 1.14E-51 T 25-04-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CLFO_RS02095 ac559c6c79a95cf5b36fcc9919e14922 461 Pfam PF01565 FAD binding domain 46 182 2.2E-32 T 25-04-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CLFO_RS02095 ac559c6c79a95cf5b36fcc9919e14922 461 SUPERFAMILY SSF56176 3 220 1.4E-61 T 25-04-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLFO_RS02095 ac559c6c79a95cf5b36fcc9919e14922 461 Gene3D G3DSA:3.30.465.10 99 220 8.0E-34 T 25-04-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLFO_RS00505 e11680890f579fe2d331e853fea63ec7 371 Pfam PF07687 Peptidase dimerisation domain 182 273 6.1E-14 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS00505 e11680890f579fe2d331e853fea63ec7 371 Gene3D G3DSA:3.30.70.360 179 283 5.3E-25 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS00505 e11680890f579fe2d331e853fea63ec7 371 Pfam PF01546 Peptidase family M20/M25/M40 72 367 7.1E-22 T 25-04-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLFO_RS00505 e11680890f579fe2d331e853fea63ec7 371 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 366 3.0E-131 T 25-04-2017 IPR010162 Peptidase M20B, peptidase T-like CLFO_RS00505 e11680890f579fe2d331e853fea63ec7 371 SUPERFAMILY SSF53187 5 176 1.49E-62 T 25-04-2017 CLFO_RS00505 e11680890f579fe2d331e853fea63ec7 371 SUPERFAMILY SSF53187 287 369 1.49E-62 T 25-04-2017 CLFO_RS00505 e11680890f579fe2d331e853fea63ec7 371 Gene3D G3DSA:3.40.630.10 287 371 1.6E-71 T 25-04-2017 CLFO_RS00505 e11680890f579fe2d331e853fea63ec7 371 Gene3D G3DSA:3.40.630.10 1 177 1.6E-71 T 25-04-2017 CLFO_RS00505 e11680890f579fe2d331e853fea63ec7 371 SUPERFAMILY SSF55031 179 289 1.83E-21 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 368 8.1E-33 T 25-04-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 251 8.1E-21 T 25-04-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 25-04-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 SUPERFAMILY SSF53738 3 180 1.69E-50 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 SUPERFAMILY SSF55957 357 448 2.09E-24 T 25-04-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 SUPERFAMILY SSF53738 257 364 8.24E-30 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 444 9.3E-179 T 25-04-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 Gene3D G3DSA:3.30.310.50 361 444 5.4E-20 T 25-04-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 Gene3D G3DSA:3.40.120.10 175 249 2.0E-27 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 135 2.1E-46 T 25-04-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 Gene3D G3DSA:3.40.120.10 250 360 2.9E-35 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 Gene3D G3DSA:3.40.120.10 3 148 2.5E-48 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 1.1E-15 T 25-04-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 1.1E-15 T 25-04-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 1.1E-15 T 25-04-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 SUPERFAMILY SSF53738 157 255 5.89E-30 T 25-04-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 444 7.2E-18 T 25-04-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS18830 1edafe5450ec0ffd69f0920cc4f39168 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 446 44.686 T 25-04-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CLFO_RS00790 0e3c87dcb806e0debef149d326be51a9 306 SUPERFAMILY SSF53448 1 267 5.63E-70 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00790 0e3c87dcb806e0debef149d326be51a9 306 Pfam PF00483 Nucleotidyl transferase 5 264 1.9E-33 T 25-04-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLFO_RS00790 0e3c87dcb806e0debef149d326be51a9 306 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 263 6.0E-125 T 25-04-2017 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CLFO_RS00790 0e3c87dcb806e0debef149d326be51a9 306 Gene3D G3DSA:3.90.550.10 4 273 1.0E-76 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS02495 d4ef142148c1644ba3efb6cfc97bbf42 394 Pfam PF00999 Sodium/hydrogen exchanger family 5 384 6.7E-35 T 25-04-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CLFO_RS03255 1674fab9133a022c5a061c7cf5fed130 276 TIGRFAM TIGR00861 MIP: MIP family channel proteins 11 251 9.3E-67 T 25-04-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CLFO_RS03255 1674fab9133a022c5a061c7cf5fed130 276 Gene3D G3DSA:1.20.1080.10 2 253 2.6E-81 T 25-04-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CLFO_RS03255 1674fab9133a022c5a061c7cf5fed130 276 Pfam PF00230 Major intrinsic protein 4 251 4.4E-60 T 25-04-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CLFO_RS03255 1674fab9133a022c5a061c7cf5fed130 276 PRINTS PR00783 Major intrinsic protein family signature 7 26 6.0E-50 T 25-04-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CLFO_RS03255 1674fab9133a022c5a061c7cf5fed130 276 PRINTS PR00783 Major intrinsic protein family signature 149 167 6.0E-50 T 25-04-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CLFO_RS03255 1674fab9133a022c5a061c7cf5fed130 276 PRINTS PR00783 Major intrinsic protein family signature 234 254 6.0E-50 T 25-04-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CLFO_RS03255 1674fab9133a022c5a061c7cf5fed130 276 PRINTS PR00783 Major intrinsic protein family signature 83 102 6.0E-50 T 25-04-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CLFO_RS03255 1674fab9133a022c5a061c7cf5fed130 276 PRINTS PR00783 Major intrinsic protein family signature 186 208 6.0E-50 T 25-04-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CLFO_RS03255 1674fab9133a022c5a061c7cf5fed130 276 PRINTS PR00783 Major intrinsic protein family signature 46 70 6.0E-50 T 25-04-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CLFO_RS03255 1674fab9133a022c5a061c7cf5fed130 276 SUPERFAMILY SSF81338 6 254 3.66E-72 T 25-04-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CLFO_RS03255 1674fab9133a022c5a061c7cf5fed130 276 ProSitePatterns PS00221 MIP family signature. 64 72 - T 25-04-2017 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CLFO_RS00920 070807027f7b0e593d54aa48e63459ec 292 Gene3D G3DSA:1.10.8.10 4 87 7.9E-20 T 25-04-2017 CLFO_RS00920 070807027f7b0e593d54aa48e63459ec 292 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 5 290 5.2E-75 T 25-04-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CLFO_RS00920 070807027f7b0e593d54aa48e63459ec 292 Gene3D G3DSA:3.40.50.150 89 288 2.3E-67 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS00920 070807027f7b0e593d54aa48e63459ec 292 Pfam PF05175 Methyltransferase small domain 116 198 1.4E-11 T 25-04-2017 IPR007848 Methyltransferase small domain GO:0008168 CLFO_RS00920 070807027f7b0e593d54aa48e63459ec 292 SUPERFAMILY SSF53335 6 286 2.31E-54 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS00920 070807027f7b0e593d54aa48e63459ec 292 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 26 284 1.1E-81 T 25-04-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CLFO_RS00920 070807027f7b0e593d54aa48e63459ec 292 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 192 198 - T 25-04-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLFO_RS00920 070807027f7b0e593d54aa48e63459ec 292 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 288 44.07 T 25-04-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CLFO_RS14540 c52fc7f8c2fb89bf6efb01dea74bbeab 250 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 88 246 2.3E-34 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS14540 c52fc7f8c2fb89bf6efb01dea74bbeab 250 Pfam PF00990 Diguanylate cyclase, GGDEF domain 90 245 3.5E-35 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS14540 c52fc7f8c2fb89bf6efb01dea74bbeab 250 SMART SM00267 79 250 8.8E-35 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS14540 c52fc7f8c2fb89bf6efb01dea74bbeab 250 SUPERFAMILY SSF55073 95 245 4.71E-36 T 25-04-2017 IPR029787 Nucleotide cyclase CLFO_RS14540 c52fc7f8c2fb89bf6efb01dea74bbeab 250 Gene3D G3DSA:3.30.70.270 92 246 3.5E-38 T 25-04-2017 CLFO_RS03925 8a779ceeb1cbe0e7404878ba66c03a17 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 30 406 2.0E-147 T 25-04-2017 CLFO_RS03925 8a779ceeb1cbe0e7404878ba66c03a17 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 147.907 T 25-04-2017 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLFO_RS03925 8a779ceeb1cbe0e7404878ba66c03a17 406 SUPERFAMILY SSF56266 14 402 5.49E-141 T 25-04-2017 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLFO_RS03925 8a779ceeb1cbe0e7404878ba66c03a17 406 Gene3D G3DSA:3.60.70.12 9 275 1.9E-105 T 25-04-2017 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLFO_RS03925 8a779ceeb1cbe0e7404878ba66c03a17 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 8 406 1.7E-153 T 25-04-2017 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLFO_RS03925 8a779ceeb1cbe0e7404878ba66c03a17 406 Pfam PF01960 ArgJ family 19 406 2.0E-153 T 25-04-2017 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLFO_RS19340 ed10b67b83f28c96cf19a1cea8269621 181 Pfam PF00578 AhpC/TSA family 6 140 7.4E-42 T 25-04-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CLFO_RS19340 ed10b67b83f28c96cf19a1cea8269621 181 PIRSF PIRSF000239 1 181 4.1E-62 T 25-04-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CLFO_RS19340 ed10b67b83f28c96cf19a1cea8269621 181 Gene3D G3DSA:3.40.30.10 6 179 1.2E-70 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS19340 ed10b67b83f28c96cf19a1cea8269621 181 SUPERFAMILY SSF52833 5 179 1.92E-62 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS16515 507255987211501efd2bae0e6228309c 451 SUPERFAMILY SSF46548 240 329 1.92E-9 T 25-04-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 CLFO_RS16515 507255987211501efd2bae0e6228309c 451 Pfam PF13375 RnfC Barrel sandwich hybrid domain 372 438 1.1E-16 T 25-04-2017 IPR026902 RnfC Barrel sandwich hybrid domain CLFO_RS16515 507255987211501efd2bae0e6228309c 451 Gene3D G3DSA:1.10.1060.10 243 332 5.0E-8 T 25-04-2017 CLFO_RS16515 507255987211501efd2bae0e6228309c 451 Pfam PF10531 SLBB domain 164 209 3.8E-6 T 25-04-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS16515 507255987211501efd2bae0e6228309c 451 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 254 265 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS16515 507255987211501efd2bae0e6228309c 451 SUPERFAMILY SSF142019 2 168 9.81E-45 T 25-04-2017 CLFO_RS16515 507255987211501efd2bae0e6228309c 451 PIRSF PIRSF036408 1 442 3.2E-188 T 25-04-2017 IPR017054 Propanediol utilization protein, PduS, predicted CLFO_RS16515 507255987211501efd2bae0e6228309c 451 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 7 151 8.0E-47 T 25-04-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS16515 507255987211501efd2bae0e6228309c 451 SUPERFAMILY SSF142984 163 229 2.62E-8 T 25-04-2017 CLFO_RS16515 507255987211501efd2bae0e6228309c 451 Pfam PF13534 4Fe-4S dicluster domain 253 313 4.5E-10 T 25-04-2017 CLFO_RS18180 ca629a2f6e9d9cc8935d52235c6acdc9 644 SUPERFAMILY SSF51445 118 558 8.3E-92 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS18180 ca629a2f6e9d9cc8935d52235c6acdc9 644 Pfam PF00128 Alpha amylase, catalytic domain 193 525 4.1E-66 T 25-04-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLFO_RS18180 ca629a2f6e9d9cc8935d52235c6acdc9 644 SUPERFAMILY SSF51011 560 640 2.42E-6 T 25-04-2017 CLFO_RS18180 ca629a2f6e9d9cc8935d52235c6acdc9 644 Gene3D G3DSA:2.60.40.1180 563 639 3.0E-8 T 25-04-2017 IPR013780 Glycosyl hydrolase, all-beta CLFO_RS18180 ca629a2f6e9d9cc8935d52235c6acdc9 644 Gene3D G3DSA:2.60.40.10 5 133 1.7E-12 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS18180 ca629a2f6e9d9cc8935d52235c6acdc9 644 SMART SM00642 142 551 1.2E-74 T 25-04-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CLFO_RS18180 ca629a2f6e9d9cc8935d52235c6acdc9 644 SUPERFAMILY SSF81296 7 102 9.33E-6 T 25-04-2017 IPR014756 Immunoglobulin E-set CLFO_RS18180 ca629a2f6e9d9cc8935d52235c6acdc9 644 Gene3D G3DSA:3.20.20.80 134 552 2.3E-102 T 25-04-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLFO_RS15820 7f2b8dc19b3a71033d1fd0fbc82ec2e9 205 Pfam PF03102 NeuB family 33 138 5.8E-44 T 25-04-2017 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 CLFO_RS15820 7f2b8dc19b3a71033d1fd0fbc82ec2e9 205 Gene3D G3DSA:3.90.1210.10 153 204 5.9E-17 T 25-04-2017 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 CLFO_RS15820 7f2b8dc19b3a71033d1fd0fbc82ec2e9 205 Gene3D G3DSA:3.20.20.70 39 137 1.2E-42 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS15820 7f2b8dc19b3a71033d1fd0fbc82ec2e9 205 SUPERFAMILY SSF51269 144 204 2.04E-16 T 25-04-2017 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 CLFO_RS15820 7f2b8dc19b3a71033d1fd0fbc82ec2e9 205 SUPERFAMILY SSF51569 2 162 1.47E-39 T 25-04-2017 CLFO_RS12045 3cd16f86e289db763bdd8a87c2530789 216 SMART SM01018 5 88 4.2E-22 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS12045 3cd16f86e289db763bdd8a87c2530789 216 SUPERFAMILY SSF47644 4 86 3.92E-20 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS12045 3cd16f86e289db763bdd8a87c2530789 216 Pfam PF02607 B12 binding domain 11 80 3.2E-10 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS12045 3cd16f86e289db763bdd8a87c2530789 216 SUPERFAMILY SSF52242 73 214 6.54E-43 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS12045 3cd16f86e289db763bdd8a87c2530789 216 Gene3D G3DSA:3.40.50.280 80 214 8.2E-49 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS12045 3cd16f86e289db763bdd8a87c2530789 216 Pfam PF02310 B12 binding domain 94 206 1.1E-23 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS12045 3cd16f86e289db763bdd8a87c2530789 216 Gene3D G3DSA:1.10.1240.10 4 79 5.8E-15 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS19890 d1442c592df39f97fb66afca801d9b45 169 PIRSF PIRSF015034 1 169 1.3E-61 T 25-04-2017 IPR025542 YacH protein CLFO_RS19890 d1442c592df39f97fb66afca801d9b45 169 SUPERFAMILY SSF46600 129 167 1.44E-6 T 25-04-2017 IPR001943 UVR domain GO:0005515 CLFO_RS19890 d1442c592df39f97fb66afca801d9b45 169 Gene3D G3DSA:4.10.860.10 129 167 7.6E-7 T 25-04-2017 IPR001943 UVR domain GO:0005515 CLFO_RS19890 d1442c592df39f97fb66afca801d9b45 169 Pfam PF02151 UvrB/uvrC motif 130 164 3.4E-8 T 25-04-2017 IPR001943 UVR domain GO:0005515 CLFO_RS15060 dadec26620b686da6972b6b248240e51 371 Pfam PF08402 TOBE domain 286 360 1.9E-7 T 25-04-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CLFO_RS15060 dadec26620b686da6972b6b248240e51 371 Pfam PF00005 ABC transporter 22 162 2.9E-31 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15060 dadec26620b686da6972b6b248240e51 371 Gene3D G3DSA:2.40.50.140 290 353 1.6E-13 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS15060 dadec26620b686da6972b6b248240e51 371 SUPERFAMILY SSF52540 4 245 9.88E-86 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15060 dadec26620b686da6972b6b248240e51 371 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15060 dadec26620b686da6972b6b248240e51 371 Gene3D G3DSA:3.40.50.300 4 235 1.2E-76 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15060 dadec26620b686da6972b6b248240e51 371 SMART SM00382 29 217 1.3E-13 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15060 dadec26620b686da6972b6b248240e51 371 Gene3D G3DSA:2.40.50.100 240 289 3.2E-21 T 25-04-2017 CLFO_RS15060 dadec26620b686da6972b6b248240e51 371 Gene3D G3DSA:2.40.50.100 354 369 3.2E-21 T 25-04-2017 CLFO_RS15060 dadec26620b686da6972b6b248240e51 371 SUPERFAMILY SSF50331 237 368 2.43E-26 T 25-04-2017 IPR008995 Molybdate/tungstate binding, C-terminal CLFO_RS02705 f35472dd64bf09d80f64a5c8b750174e 489 Gene3D G3DSA:1.50.10.20 170 323 1.3E-22 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS02705 f35472dd64bf09d80f64a5c8b750174e 489 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 242 280 0.075 T 25-04-2017 IPR001330 PFTB repeat GO:0003824 CLFO_RS02705 f35472dd64bf09d80f64a5c8b750174e 489 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 183 236 0.026 T 25-04-2017 IPR001330 PFTB repeat GO:0003824 CLFO_RS02705 f35472dd64bf09d80f64a5c8b750174e 489 SUPERFAMILY SSF48239 164 344 1.74E-24 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS14470 863af0636d9013d2e82be5925fb23825 104 Pfam PF07875 Coat F domain 17 78 1.6E-8 T 25-04-2017 IPR012851 Spore coat protein CotF-like CLFO_RS20140 917097478779768acd5775e3102fec35 292 SUPERFAMILY SSF55060 163 276 3.49E-28 T 25-04-2017 IPR013750 GHMP kinase, C-terminal domain CLFO_RS20140 917097478779768acd5775e3102fec35 292 PRINTS PR00958 Homoserine kinase signature 170 187 2.5E-7 T 25-04-2017 CLFO_RS20140 917097478779768acd5775e3102fec35 292 PRINTS PR00958 Homoserine kinase signature 243 258 2.5E-7 T 25-04-2017 CLFO_RS20140 917097478779768acd5775e3102fec35 292 PRINTS PR00958 Homoserine kinase signature 8 23 2.5E-7 T 25-04-2017 CLFO_RS20140 917097478779768acd5775e3102fec35 292 PRINTS PR00958 Homoserine kinase signature 105 120 2.5E-7 T 25-04-2017 CLFO_RS20140 917097478779768acd5775e3102fec35 292 Gene3D G3DSA:3.30.230.10 5 160 2.1E-55 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS20140 917097478779768acd5775e3102fec35 292 PIRSF PIRSF010376 2 288 1.7E-96 T 25-04-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CLFO_RS20140 917097478779768acd5775e3102fec35 292 Pfam PF08544 GHMP kinases C terminal 201 272 4.3E-9 T 25-04-2017 IPR013750 GHMP kinase, C-terminal domain CLFO_RS20140 917097478779768acd5775e3102fec35 292 Gene3D G3DSA:3.30.70.890 164 285 1.1E-34 T 25-04-2017 IPR013750 GHMP kinase, C-terminal domain CLFO_RS20140 917097478779768acd5775e3102fec35 292 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 283 1.3E-89 T 25-04-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CLFO_RS20140 917097478779768acd5775e3102fec35 292 SUPERFAMILY SSF54211 4 159 2.5E-44 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS20140 917097478779768acd5775e3102fec35 292 Pfam PF00288 GHMP kinases N terminal domain 89 146 7.4E-12 T 25-04-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 CLFO_RS20140 917097478779768acd5775e3102fec35 292 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 282 35.157 T 25-04-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CLFO_RS01965 655682e176a788c902211f01608d867d 510 Gene3D G3DSA:3.40.50.620 211 385 9.9E-59 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS01965 655682e176a788c902211f01608d867d 510 Gene3D G3DSA:3.30.300.10 386 510 1.5E-52 T 25-04-2017 CLFO_RS01965 655682e176a788c902211f01608d867d 510 SUPERFAMILY SSF52317 5 197 7.12E-57 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS01965 655682e176a788c902211f01608d867d 510 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 201 510 2.7E-156 T 25-04-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CLFO_RS01965 655682e176a788c902211f01608d867d 510 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 193 6.8E-80 T 25-04-2017 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CLFO_RS01965 655682e176a788c902211f01608d867d 510 Pfam PF00958 GMP synthase C terminal domain 418 509 1.4E-44 T 25-04-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CLFO_RS01965 655682e176a788c902211f01608d867d 510 Gene3D G3DSA:3.40.50.880 2 210 5.8E-67 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS01965 655682e176a788c902211f01608d867d 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 8.8E-6 T 25-04-2017 CLFO_RS01965 655682e176a788c902211f01608d867d 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 8.8E-6 T 25-04-2017 CLFO_RS01965 655682e176a788c902211f01608d867d 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 8.8E-6 T 25-04-2017 CLFO_RS01965 655682e176a788c902211f01608d867d 510 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 510 55.635 T 25-04-2017 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CLFO_RS01965 655682e176a788c902211f01608d867d 510 SUPERFAMILY SSF52402 181 432 4.39E-58 T 25-04-2017 CLFO_RS01965 655682e176a788c902211f01608d867d 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 2.7E-6 T 25-04-2017 CLFO_RS01965 655682e176a788c902211f01608d867d 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 2.7E-6 T 25-04-2017 CLFO_RS01965 655682e176a788c902211f01608d867d 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 2.7E-6 T 25-04-2017 CLFO_RS01965 655682e176a788c902211f01608d867d 510 Pfam PF00117 Glutamine amidotransferase class-I 8 188 9.0E-43 T 25-04-2017 IPR017926 Glutamine amidotransferase CLFO_RS01965 655682e176a788c902211f01608d867d 510 Pfam PF02540 NAD synthase 211 387 2.9E-7 T 25-04-2017 IPR022310 NAD/GMP synthase CLFO_RS20420 9a37ad1da4d10fc76e890a6386453ac8 114 Gene3D G3DSA:2.60.120.10 4 109 1.2E-26 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS20420 9a37ad1da4d10fc76e890a6386453ac8 114 SUPERFAMILY SSF51182 11 109 1.86E-25 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS20420 9a37ad1da4d10fc76e890a6386453ac8 114 Pfam PF07883 Cupin domain 40 108 8.3E-18 T 25-04-2017 IPR013096 Cupin 2, conserved barrel CLFO_RS06365 64a0a9e115dffe143474191eb0b81a16 307 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 299 1.0E-58 T 25-04-2017 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 CLFO_RS06365 64a0a9e115dffe143474191eb0b81a16 307 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 181 299 3.0E-20 T 25-04-2017 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 CLFO_RS06365 64a0a9e115dffe143474191eb0b81a16 307 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 141 2.7E-32 T 25-04-2017 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 CLFO_RS06365 64a0a9e115dffe143474191eb0b81a16 307 Gene3D G3DSA:1.10.1040.10 181 299 3.2E-26 T 25-04-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLFO_RS06365 64a0a9e115dffe143474191eb0b81a16 307 Gene3D G3DSA:3.40.50.720 1 179 3.4E-48 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS06365 64a0a9e115dffe143474191eb0b81a16 307 SUPERFAMILY SSF51735 1 165 2.56E-13 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS06365 64a0a9e115dffe143474191eb0b81a16 307 SUPERFAMILY SSF48179 181 305 1.77E-19 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS07215 7e6a51b8f899512e5a4ce1b058304f35 507 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 25-04-2017 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 CLFO_RS07215 7e6a51b8f899512e5a4ce1b058304f35 507 Pfam PF00221 Aromatic amino acid lyase 11 469 2.5E-204 T 25-04-2017 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 CLFO_RS07215 7e6a51b8f899512e5a4ce1b058304f35 507 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 503 4.6E-215 T 25-04-2017 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS07215 7e6a51b8f899512e5a4ce1b058304f35 507 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 502 47.653 T 25-04-2017 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS07215 7e6a51b8f899512e5a4ce1b058304f35 507 SUPERFAMILY SSF48557 3 498 4.47E-201 T 25-04-2017 IPR008948 L-Aspartase-like GO:0003824 CLFO_RS07215 7e6a51b8f899512e5a4ce1b058304f35 507 Gene3D G3DSA:1.10.275.10 3 197 1.0E-82 T 25-04-2017 IPR024083 Fumarase/histidase, N-terminal CLFO_RS07215 7e6a51b8f899512e5a4ce1b058304f35 507 Gene3D G3DSA:1.20.200.10 198 504 4.4E-133 T 25-04-2017 CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 Pfam PF00158 Sigma-54 interaction domain 153 318 3.5E-61 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 Pfam PF00989 PAS fold 11 83 3.8E-9 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 123 1.5E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 177 190 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 SMART SM00382 173 315 1.1E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 Pfam PF02954 Bacterial regulatory protein, Fis family 420 457 2.5E-10 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 Gene3D G3DSA:3.30.450.20 11 131 1.4E-14 T 25-04-2017 CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 SUPERFAMILY SSF55785 10 108 3.49E-12 T 25-04-2017 IPR000014 PAS domain CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 SUPERFAMILY SSF52540 152 392 1.39E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 SMART SM00091 9 74 0.0052 T 25-04-2017 IPR000014 PAS domain CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 460 7.7E-8 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 423 440 7.7E-8 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 238 253 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 365 374 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 SUPERFAMILY SSF46689 365 459 1.97E-13 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 Gene3D G3DSA:1.10.10.60 406 459 1.2E-13 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 Gene3D G3DSA:1.10.8.60 325 395 1.3E-23 T 25-04-2017 CLFO_RS09050 ab33372b2150e68033ef2d7672537b22 464 Gene3D G3DSA:3.40.50.300 149 324 9.1E-52 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SUPERFAMILY SSF117281 660 857 5.1E-55 T 25-04-2017 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SUPERFAMILY SSF117281 1130 1360 6.54E-70 T 25-04-2017 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 977 1024 5.7E-12 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 1308 1354 1.9E-14 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 1214 1260 3.4E-14 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 567 604 13.0 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 1071 1117 1.1E-7 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 1025 1070 6.3E-11 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 1165 1213 2.6E-14 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 1261 1307 1.8E-13 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 649 694 1.0E-17 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 1355 1404 0.0013 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 836 879 0.084 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 1118 1164 5.5E-9 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 880 929 2.7E-14 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 742 788 1.1E-4 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 695 741 1.8E-12 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 789 835 1.4E-7 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 605 648 1.5E-13 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SMART SM00612 930 976 1.6E-14 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Gene3D G3DSA:3.40.50.200 137 160 1.2E-86 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Gene3D G3DSA:3.40.50.200 208 220 1.2E-86 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Gene3D G3DSA:3.40.50.200 254 531 1.2E-86 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 271 282 - T 25-04-2017 IPR023827 Peptidase S8, subtilisin, Asp-active site CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 5.3E-15 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 PRINTS PR00723 Subtilisin serine protease family (S8) signature 330 343 5.3E-15 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 PRINTS PR00723 Subtilisin serine protease family (S8) signature 266 285 5.3E-15 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 PRINTS PR00501 Kelch repeat signature 603 616 2.7E-5 T 25-04-2017 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 PRINTS PR00501 Kelch repeat signature 617 631 2.7E-5 T 25-04-2017 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 PRINTS PR00501 Kelch repeat signature 819 831 2.7E-5 T 25-04-2017 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Gene3D G3DSA:2.130.10.80 951 1194 1.0E-75 T 25-04-2017 IPR015916 Galactose oxidase, beta-propeller CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Gene3D G3DSA:2.130.10.80 580 765 6.3E-62 T 25-04-2017 IPR015916 Galactose oxidase, beta-propeller CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Gene3D G3DSA:2.130.10.80 766 950 1.8E-46 T 25-04-2017 IPR015916 Galactose oxidase, beta-propeller CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SUPERFAMILY SSF52743 254 529 1.96E-75 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF00082 Subtilase family 266 526 1.3E-49 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 SUPERFAMILY SSF117281 859 1077 1.31E-67 T 25-04-2017 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 1394 1426 3.2E-8 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 965 1011 1.3E-11 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 638 681 9.2E-14 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 1108 1151 5.2E-10 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 1296 1340 9.9E-11 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 732 773 3.4E-7 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 784 816 1.8E-5 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 593 635 1.4E-11 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 683 728 1.1E-16 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 1059 1104 1.5E-6 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 1014 1057 4.2E-11 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 1250 1294 3.3E-13 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 1347 1391 3.2E-7 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 918 963 1.4E-13 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 1202 1247 8.3E-13 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 1154 1200 9.5E-14 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Pfam PF01344 Kelch motif 868 916 9.9E-16 T 25-04-2017 IPR006652 Kelch repeat type 1 GO:0005515 CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 334 344 - T 25-04-2017 IPR022398 Peptidase S8, subtilisin, His-active site CLFO_RS03405 4bb19d37c444b4f36e873fe68600db17 1472 Gene3D G3DSA:2.120.10.80 1195 1430 1.6E-70 T 25-04-2017 IPR015915 Kelch-type beta propeller GO:0005515 CLFO_RS15190 f69de2917a79962f2c062562e98e4709 395 SUPERFAMILY SSF56281 8 283 2.62E-53 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS15190 f69de2917a79962f2c062562e98e4709 395 SMART SM00849 34 225 1.5E-27 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS15190 f69de2917a79962f2c062562e98e4709 395 SUPERFAMILY SSF52218 249 395 3.83E-34 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS15190 f69de2917a79962f2c062562e98e4709 395 Gene3D G3DSA:3.60.15.10 3 244 2.2E-88 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS15190 f69de2917a79962f2c062562e98e4709 395 Pfam PF00753 Metallo-beta-lactamase superfamily 34 169 3.8E-10 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS15190 f69de2917a79962f2c062562e98e4709 395 Pfam PF00258 Flavodoxin 254 359 1.1E-6 T 25-04-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLFO_RS15190 f69de2917a79962f2c062562e98e4709 395 Gene3D G3DSA:3.40.50.360 247 393 1.8E-46 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS15190 f69de2917a79962f2c062562e98e4709 395 PIRSF PIRSF005243 1 395 2.0E-148 T 25-04-2017 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CLFO_RS10125 e993703c962f0f78b5be7d076abdd8b5 402 Pfam PF12704 MacB-like periplasmic core domain 28 218 7.9E-26 T 25-04-2017 IPR025857 MacB-like periplasmic core domain CLFO_RS10125 e993703c962f0f78b5be7d076abdd8b5 402 Pfam PF02687 FtsX-like permease family 284 395 1.4E-20 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS06305 77501123536bc24e1e88dcff74fa35af 264 Gene3D G3DSA:3.30.390.50 166 261 9.0E-13 T 25-04-2017 CLFO_RS06305 77501123536bc24e1e88dcff74fa35af 264 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 7 154 9.8E-20 T 25-04-2017 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CLFO_RS06305 77501123536bc24e1e88dcff74fa35af 264 Gene3D G3DSA:3.30.465.10 53 158 2.6E-13 T 25-04-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLFO_RS06305 77501123536bc24e1e88dcff74fa35af 264 SUPERFAMILY SSF56176 5 159 7.63E-23 T 25-04-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLFO_RS06305 77501123536bc24e1e88dcff74fa35af 264 SUPERFAMILY SSF55447 163 262 2.09E-11 T 25-04-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLFO_RS06305 77501123536bc24e1e88dcff74fa35af 264 SMART SM01092 165 260 4.1E-8 T 25-04-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLFO_RS06305 77501123536bc24e1e88dcff74fa35af 264 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 174 259 1.5E-6 T 25-04-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLFO_RS11785 8c60cbcf813ffba3edd64f6b3b305f7f 224 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 103 222 2.3E-34 T 25-04-2017 IPR014247 Sporulation lipoprotein YhcN/YlaJ CLFO_RS11785 8c60cbcf813ffba3edd64f6b3b305f7f 224 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 95 220 1.6E-24 T 25-04-2017 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like CLFO_RS12745 06a4262442dfb4ff3a051e62bb35d526 399 Pfam PF13186 Iron-sulfur cluster-binding domain 286 363 1.4E-11 T 25-04-2017 IPR023885 4Fe4S-binding SPASM domain CLFO_RS12745 06a4262442dfb4ff3a051e62bb35d526 399 SMART SM00729 58 264 3.5E-4 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS12745 06a4262442dfb4ff3a051e62bb35d526 399 SUPERFAMILY SSF102114 58 369 1.7E-45 T 25-04-2017 CLFO_RS12745 06a4262442dfb4ff3a051e62bb35d526 399 Pfam PF13394 4Fe-4S single cluster domain 65 145 1.8E-6 T 25-04-2017 CLFO_RS12745 06a4262442dfb4ff3a051e62bb35d526 399 TIGRFAM TIGR04317 W_rSAM_matur: tungsten cofactor oxidoreducase radical SAM maturase 56 399 3.8E-128 T 25-04-2017 IPR027604 Tungsten cofactor oxidoreducase radical SAM maturase CLFO_RS12745 06a4262442dfb4ff3a051e62bb35d526 399 Pfam PF04055 Radical SAM superfamily 62 194 1.8E-13 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS12745 06a4262442dfb4ff3a051e62bb35d526 399 Gene3D G3DSA:3.20.20.70 57 370 1.9E-52 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS20130 323dec749b1370485486cb41b362b789 244 Pfam PF12804 MobA-like NTP transferase domain 3 130 4.5E-17 T 25-04-2017 IPR025877 MobA-like NTP transferase CLFO_RS20130 323dec749b1370485486cb41b362b789 244 Gene3D G3DSA:3.90.550.10 1 244 5.0E-18 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS20130 323dec749b1370485486cb41b362b789 244 SUPERFAMILY SSF53448 1 236 5.18E-32 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS09990 dafce933f8fbd4869ed36059ffc60054 316 SUPERFAMILY SSF81345 6 312 5.36E-60 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS09990 dafce933f8fbd4869ed36059ffc60054 316 Gene3D G3DSA:1.10.3470.10 8 315 1.7E-61 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS09990 dafce933f8fbd4869ed36059ffc60054 316 Pfam PF01032 FecCD transport family 26 312 3.8E-55 T 25-04-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CLFO_RS00355 7bd4c028b64bce469a58df9f79e471e2 256 Gene3D G3DSA:3.40.50.720 11 78 6.4E-4 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS00355 7bd4c028b64bce469a58df9f79e471e2 256 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 2 253 3.8E-63 T 25-04-2017 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CLFO_RS00355 7bd4c028b64bce469a58df9f79e471e2 256 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 241 2.4E-75 T 25-04-2017 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CLFO_RS03775 1b288dcc9323b2764f20916d5638a3ca 373 Gene3D G3DSA:2.40.50.140 293 339 1.0E-8 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS03775 1b288dcc9323b2764f20916d5638a3ca 373 Pfam PF08402 TOBE domain 289 363 1.1E-4 T 25-04-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CLFO_RS03775 1b288dcc9323b2764f20916d5638a3ca 373 SMART SM00382 29 217 2.8E-9 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS03775 1b288dcc9323b2764f20916d5638a3ca 373 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS03775 1b288dcc9323b2764f20916d5638a3ca 373 SUPERFAMILY SSF50331 243 371 6.56E-24 T 25-04-2017 IPR008995 Molybdate/tungstate binding, C-terminal CLFO_RS03775 1b288dcc9323b2764f20916d5638a3ca 373 Pfam PF00005 ABC transporter 21 162 3.1E-28 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS03775 1b288dcc9323b2764f20916d5638a3ca 373 Gene3D G3DSA:3.40.50.300 4 240 1.8E-71 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03775 1b288dcc9323b2764f20916d5638a3ca 373 Gene3D G3DSA:2.40.50.100 357 371 1.1E-17 T 25-04-2017 CLFO_RS03775 1b288dcc9323b2764f20916d5638a3ca 373 Gene3D G3DSA:2.40.50.100 245 292 1.1E-17 T 25-04-2017 CLFO_RS03775 1b288dcc9323b2764f20916d5638a3ca 373 SUPERFAMILY SSF52540 5 248 2.28E-80 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16555 4b258a5cf2efc2e0736790e3d3f6e92c 846 SUPERFAMILY SSF51998 58 843 2.81E-240 T 25-04-2017 CLFO_RS16555 4b258a5cf2efc2e0736790e3d3f6e92c 846 Hamap MF_02058 Choline trimethylamine-lyase [cutC]. 54 846 58.211 T 25-04-2017 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167 CLFO_RS16555 4b258a5cf2efc2e0736790e3d3f6e92c 846 Pfam PF02901 Pyruvate formate lyase-like 58 707 1.7E-234 T 25-04-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 CLFO_RS16555 4b258a5cf2efc2e0736790e3d3f6e92c 846 Pfam PF01228 Glycine radical 724 827 8.9E-27 T 25-04-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CLFO_RS16555 4b258a5cf2efc2e0736790e3d3f6e92c 846 Gene3D G3DSA:3.20.70.20 51 844 4.2E-254 T 25-04-2017 CLFO_RS16555 4b258a5cf2efc2e0736790e3d3f6e92c 846 ProSitePatterns PS00850 Glycine radical domain signature. 816 824 - T 25-04-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CLFO_RS16555 4b258a5cf2efc2e0736790e3d3f6e92c 846 TIGRFAM TIGR04394 choline_CutC: choline trimethylamine-lyase 58 846 0.0 T 25-04-2017 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167 CLFO_RS16555 4b258a5cf2efc2e0736790e3d3f6e92c 846 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 58 842 2.0E-206 T 25-04-2017 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CLFO_RS18050 cce24bd3438beba501eae895e55a5d2f 308 SUPERFAMILY SSF51366 2 278 5.57E-76 T 25-04-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLFO_RS18050 cce24bd3438beba501eae895e55a5d2f 308 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 4 305 34.915 T 25-04-2017 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686 CLFO_RS18050 cce24bd3438beba501eae895e55a5d2f 308 Gene3D G3DSA:3.20.20.70 3 279 4.5E-64 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS18050 cce24bd3438beba501eae895e55a5d2f 308 SMART SM00934 15 282 1.0E-20 T 25-04-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CLFO_RS18050 cce24bd3438beba501eae895e55a5d2f 308 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 278 1.1E-79 T 25-04-2017 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686 CLFO_RS18050 cce24bd3438beba501eae895e55a5d2f 308 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 56 276 1.8E-24 T 25-04-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 Gene3D G3DSA:3.50.50.60 1 100 1.5E-22 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 SUPERFAMILY SSF51905 1 299 3.86E-41 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 1.2E-11 T 25-04-2017 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 1.2E-11 T 25-04-2017 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 1.2E-11 T 25-04-2017 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 1.2E-11 T 25-04-2017 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 4.3E-22 T 25-04-2017 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 4.3E-22 T 25-04-2017 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 4.3E-22 T 25-04-2017 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 4.3E-22 T 25-04-2017 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 115 4.3E-22 T 25-04-2017 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 Gene3D G3DSA:3.50.50.60 101 298 1.1E-49 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS13465 b23fce957c907b5df33e2c54a648a5aa 408 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 289 1.8E-53 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS15150 3736c6705c0994b67128cb914a0848db 409 Gene3D G3DSA:3.40.50.360 248 404 2.1E-40 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS15150 3736c6705c0994b67128cb914a0848db 409 SUPERFAMILY SSF52218 249 407 7.08E-30 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS15150 3736c6705c0994b67128cb914a0848db 409 Pfam PF00753 Metallo-beta-lactamase superfamily 62 165 2.7E-5 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS15150 3736c6705c0994b67128cb914a0848db 409 SMART SM00849 34 223 1.4E-23 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS15150 3736c6705c0994b67128cb914a0848db 409 SUPERFAMILY SSF56281 12 284 8.67E-47 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS15150 3736c6705c0994b67128cb914a0848db 409 Pfam PF00258 Flavodoxin 253 366 6.7E-9 T 25-04-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLFO_RS15150 3736c6705c0994b67128cb914a0848db 409 Gene3D G3DSA:3.60.15.10 4 242 2.6E-80 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS15150 3736c6705c0994b67128cb914a0848db 409 ProSitePatterns PS00201 Flavodoxin signature. 253 269 - T 25-04-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLFO_RS15150 3736c6705c0994b67128cb914a0848db 409 PIRSF PIRSF005243 1 408 4.8E-127 T 25-04-2017 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CLFO_RS02270 9fd2c3c98b280b5c52c36a4c863fd9c6 399 SUPERFAMILY SSF53686 7 390 1.96E-148 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS02270 9fd2c3c98b280b5c52c36a4c863fd9c6 399 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 391 8.0E-203 T 25-04-2017 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLFO_RS02270 9fd2c3c98b280b5c52c36a4c863fd9c6 399 Gene3D G3DSA:3.40.50.1100 100 178 3.7E-19 T 25-04-2017 CLFO_RS02270 9fd2c3c98b280b5c52c36a4c863fd9c6 399 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 82 96 - T 25-04-2017 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLFO_RS02270 9fd2c3c98b280b5c52c36a4c863fd9c6 399 PIRSF PIRSF001413 2 398 6.7E-175 T 25-04-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLFO_RS02270 9fd2c3c98b280b5c52c36a4c863fd9c6 399 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 3 392 53.879 T 25-04-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLFO_RS02270 9fd2c3c98b280b5c52c36a4c863fd9c6 399 Gene3D G3DSA:3.40.50.1100 179 395 1.3E-96 T 25-04-2017 CLFO_RS02270 9fd2c3c98b280b5c52c36a4c863fd9c6 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 54 379 2.2E-47 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS16510 bd6916d02fabc69546c7c01b9b6a8c7c 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 154 1.0E-21 T 25-04-2017 CLFO_RS16510 bd6916d02fabc69546c7c01b9b6a8c7c 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 60 6.0E-20 T 25-04-2017 CLFO_RS16510 bd6916d02fabc69546c7c01b9b6a8c7c 182 SUPERFAMILY SSF143414 95 180 4.05E-20 T 25-04-2017 CLFO_RS16510 bd6916d02fabc69546c7c01b9b6a8c7c 182 Pfam PF00936 BMC domain 4 76 4.5E-23 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS16510 bd6916d02fabc69546c7c01b9b6a8c7c 182 Pfam PF00936 BMC domain 96 173 1.8E-20 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS16510 bd6916d02fabc69546c7c01b9b6a8c7c 182 PIRSF PIRSF034834 1 182 1.3E-55 T 25-04-2017 IPR011238 Polyhedral organelle shell protein PduT CLFO_RS16510 bd6916d02fabc69546c7c01b9b6a8c7c 182 SUPERFAMILY SSF143414 3 94 2.35E-26 T 25-04-2017 CLFO_RS16510 bd6916d02fabc69546c7c01b9b6a8c7c 182 SMART SM00877 3 77 7.4E-26 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS16510 bd6916d02fabc69546c7c01b9b6a8c7c 182 SMART SM00877 95 173 3.9E-24 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS05590 0c02c6029548e953b835669b42edd50c 257 PIRSF PIRSF005647 1 257 3.6E-81 T 25-04-2017 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type CLFO_RS05590 0c02c6029548e953b835669b42edd50c 257 SUPERFAMILY SSF52540 1 239 2.2E-36 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05590 0c02c6029548e953b835669b42edd50c 257 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 209 1.7E-31 T 25-04-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLFO_RS05590 0c02c6029548e953b835669b42edd50c 257 Gene3D G3DSA:3.40.50.300 1 248 1.6E-43 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17700 d63065892f98ed54ac21cf92d513429e 307 PIRSF PIRSF003097 1 307 1.7E-76 T 25-04-2017 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CLFO_RS17700 d63065892f98ed54ac21cf92d513429e 307 Pfam PF02687 FtsX-like permease family 185 305 3.7E-14 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 Gene3D G3DSA:3.40.50.10490 23 99 1.6E-68 T 25-04-2017 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 Gene3D G3DSA:3.40.50.10490 158 227 1.6E-68 T 25-04-2017 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 Gene3D G3DSA:1.10.287.610 100 152 2.2E-26 T 25-04-2017 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 Pfam PF00318 Ribosomal protein S2 9 224 1.2E-101 T 25-04-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 25-04-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 SUPERFAMILY SSF52313 6 228 3.66E-99 T 25-04-2017 IPR023591 Ribosomal protein S2, flavodoxin-like domain CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 25-04-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 6.5E-112 T 25-04-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.1E-42 T 25-04-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.1E-42 T 25-04-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.1E-42 T 25-04-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.1E-42 T 25-04-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.1E-42 T 25-04-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.1E-42 T 25-04-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS10960 344e16b80c06fff632387437db9c2fee 232 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 43.752 T 25-04-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CLFO_RS02260 1269e2bfc3cd3b0355d601455ac317ba 257 SUPERFAMILY SSF51366 10 256 9.3E-85 T 25-04-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLFO_RS02260 1269e2bfc3cd3b0355d601455ac317ba 257 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 25-04-2017 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CLFO_RS02260 1269e2bfc3cd3b0355d601455ac317ba 257 Gene3D G3DSA:3.20.20.70 1 256 1.2E-99 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS02260 1269e2bfc3cd3b0355d601455ac317ba 257 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 257 33.732 T 25-04-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CLFO_RS02260 1269e2bfc3cd3b0355d601455ac317ba 257 Pfam PF00218 Indole-3-glycerol phosphate synthase 3 254 1.7E-88 T 25-04-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CLFO_RS13470 3829393012087ec1a6de969231ad795a 148 Gene3D G3DSA:3.30.70.20 6 62 1.6E-7 T 25-04-2017 CLFO_RS13470 3829393012087ec1a6de969231ad795a 148 SUPERFAMILY SSF54862 4 143 1.51E-33 T 25-04-2017 CLFO_RS13470 3829393012087ec1a6de969231ad795a 148 Gene3D G3DSA:3.30.70.20 63 99 2.8E-9 T 25-04-2017 CLFO_RS13470 3829393012087ec1a6de969231ad795a 148 Gene3D G3DSA:3.30.70.20 100 145 3.3E-12 T 25-04-2017 CLFO_RS13470 3829393012087ec1a6de969231ad795a 148 Pfam PF13247 4Fe-4S dicluster domain 58 144 4.8E-21 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS13470 3829393012087ec1a6de969231ad795a 148 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 94 105 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS14530 448708a2d30ac0f7dfa081d9e550daf1 129 Pfam PF09345 Domain of unknown function (DUF1987) 13 112 1.3E-30 T 25-04-2017 IPR018530 Domain of unknown function DUF1987 CLFO_RS15850 e1aef8f1174b650da710ce8a08272c6e 575 SUPERFAMILY SSF90123 6 320 9.94E-49 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS15850 e1aef8f1174b650da710ce8a08272c6e 575 Pfam PF00664 ABC transporter transmembrane region 29 281 7.0E-22 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS15850 e1aef8f1174b650da710ce8a08272c6e 575 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15850 e1aef8f1174b650da710ce8a08272c6e 575 Gene3D G3DSA:1.20.1560.10 6 320 1.9E-39 T 25-04-2017 CLFO_RS15850 e1aef8f1174b650da710ce8a08272c6e 575 SMART SM00382 363 549 1.3E-15 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15850 e1aef8f1174b650da710ce8a08272c6e 575 Pfam PF00005 ABC transporter 354 503 9.6E-36 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15850 e1aef8f1174b650da710ce8a08272c6e 575 Gene3D G3DSA:3.40.50.300 337 567 4.6E-81 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15850 e1aef8f1174b650da710ce8a08272c6e 575 SUPERFAMILY SSF52540 335 573 1.36E-91 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04535 24074f5e47f11ec0b487443bda43d7c1 334 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 333 6.7E-161 T 25-04-2017 IPR010894 Stage V sporulation AD CLFO_RS04535 24074f5e47f11ec0b487443bda43d7c1 334 Gene3D G3DSA:3.40.47.10 52 172 8.9E-12 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04535 24074f5e47f11ec0b487443bda43d7c1 334 PIRSF PIRSF011570 1 334 5.6E-164 T 25-04-2017 IPR010894 Stage V sporulation AD CLFO_RS04535 24074f5e47f11ec0b487443bda43d7c1 334 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 333 2.6E-155 T 25-04-2017 IPR010894 Stage V sporulation AD CLFO_RS04535 24074f5e47f11ec0b487443bda43d7c1 334 SUPERFAMILY SSF53901 55 263 5.39E-19 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS10580 7bcddf1bc55287642070489cf55c04f3 264 Pfam PF03837 RecT family 22 193 2.9E-39 T 25-04-2017 IPR018330 RecT family GO:0003677|GO:0006259 CLFO_RS10580 7bcddf1bc55287642070489cf55c04f3 264 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 6 186 1.7E-48 T 25-04-2017 IPR010183 Bacteriophage lambda, Bet CLFO_RS05810 3cbfd07acd572aad1993d6ab4e0b5f1a 230 Gene3D G3DSA:3.40.50.300 1 221 2.5E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05810 3cbfd07acd572aad1993d6ab4e0b5f1a 230 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 229 3.7E-101 T 25-04-2017 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE CLFO_RS05810 3cbfd07acd572aad1993d6ab4e0b5f1a 230 SMART SM00382 26 209 2.1E-9 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS05810 3cbfd07acd572aad1993d6ab4e0b5f1a 230 Pfam PF00005 ABC transporter 17 159 2.8E-34 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS05810 3cbfd07acd572aad1993d6ab4e0b5f1a 230 SUPERFAMILY SSF52540 2 218 2.15E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19725 7a5cfdbdfb8bfae4dae06b723644b21c 156 Gene3D G3DSA:1.10.455.10 7 156 3.7E-66 T 25-04-2017 IPR023798 Ribosomal protein S7 domain CLFO_RS19725 7a5cfdbdfb8bfae4dae06b723644b21c 156 PIRSF PIRSF002122 3 156 3.5E-59 T 25-04-2017 IPR000235 Ribosomal protein S5/S7 GO:0006412 CLFO_RS19725 7a5cfdbdfb8bfae4dae06b723644b21c 156 SUPERFAMILY SSF47973 7 149 2.22E-61 T 25-04-2017 IPR023798 Ribosomal protein S7 domain CLFO_RS19725 7a5cfdbdfb8bfae4dae06b723644b21c 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.414 T 25-04-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CLFO_RS19725 7a5cfdbdfb8bfae4dae06b723644b21c 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.5E-70 T 25-04-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CLFO_RS19725 7a5cfdbdfb8bfae4dae06b723644b21c 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 2.9E-67 T 25-04-2017 IPR023798 Ribosomal protein S7 domain CLFO_RS19725 7a5cfdbdfb8bfae4dae06b723644b21c 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 25-04-2017 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS18310 2055f3379534ff7de9c7873dbd9db2eb 685 Pfam PF00672 HAMP domain 306 374 1.9E-10 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS18310 2055f3379534ff7de9c7873dbd9db2eb 685 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 680 3.3E-38 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS18310 2055f3379534ff7de9c7873dbd9db2eb 685 Pfam PF17201 Cache 3/Cache 2 fusion domain 30 302 5.0E-72 T 25-04-2017 IPR033462 Cache 3/Cache 2 fusion domain CLFO_RS18310 2055f3379534ff7de9c7873dbd9db2eb 685 SUPERFAMILY SSF58104 415 684 2.88E-62 T 25-04-2017 CLFO_RS18310 2055f3379534ff7de9c7873dbd9db2eb 685 SUPERFAMILY SSF58104 356 382 2.88E-62 T 25-04-2017 CLFO_RS18310 2055f3379534ff7de9c7873dbd9db2eb 685 SUPERFAMILY SSF103190 114 204 9.02E-13 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS18310 2055f3379534ff7de9c7873dbd9db2eb 685 SMART SM00283 409 684 5.4E-48 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS18310 2055f3379534ff7de9c7873dbd9db2eb 685 Gene3D G3DSA:1.10.287.950 423 642 6.4E-42 T 25-04-2017 CLFO_RS18310 2055f3379534ff7de9c7873dbd9db2eb 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 536 565 1.3E-19 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS18310 2055f3379534ff7de9c7873dbd9db2eb 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 1.3E-19 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS18310 2055f3379534ff7de9c7873dbd9db2eb 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 507 534 1.3E-19 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS18310 2055f3379534ff7de9c7873dbd9db2eb 685 Gene3D G3DSA:3.30.450.20 172 302 2.9E-20 T 25-04-2017 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 Gene3D G3DSA:1.10.10.10 172 228 3.1E-15 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 80 93 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 PIRSF PIRSF000770 4 234 1.2E-75 T 25-04-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 51 228 4.3E-30 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 5 230 5.5E-110 T 25-04-2017 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 PRINTS PR00046 Major sigma-70 factor signature 80 93 1.7E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 PRINTS PR00046 Major sigma-70 factor signature 215 226 1.7E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 PRINTS PR00046 Major sigma-70 factor signature 179 191 1.7E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 PRINTS PR00046 Major sigma-70 factor signature 200 215 1.7E-12 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 Pfam PF04542 Sigma-70 region 2 56 124 5.5E-15 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 SUPERFAMILY SSF88946 22 123 4.71E-34 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 Gene3D G3DSA:1.10.601.10 26 121 1.8E-31 T 25-04-2017 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 Pfam PF04545 Sigma-70, region 4 178 227 6.4E-14 T 25-04-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 SUPERFAMILY SSF88659 140 228 3.49E-17 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS09530 0258a9b534d9c3411c61da1b1b1b21a8 234 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 200 226 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS15090 767c551b5bbc07e728886b1fe318cf60 129 PIRSF PIRSF019455 1 129 2.0E-35 T 25-04-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLFO_RS15090 767c551b5bbc07e728886b1fe318cf60 129 SUPERFAMILY SSF46785 7 123 2.38E-30 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15090 767c551b5bbc07e728886b1fe318cf60 129 Pfam PF03965 Penicillinase repressor 8 121 1.2E-33 T 25-04-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLFO_RS15090 767c551b5bbc07e728886b1fe318cf60 129 Gene3D G3DSA:1.10.10.10 4 79 9.8E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS00540 7f64d651212112520ec231b85eef3768 459 SUPERFAMILY SSF53448 1 251 3.13E-66 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00540 7f64d651212112520ec231b85eef3768 459 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 450 40.22 T 25-04-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CLFO_RS00540 7f64d651212112520ec231b85eef3768 459 SUPERFAMILY SSF51161 248 447 1.22E-46 T 25-04-2017 IPR011004 Trimeric LpxA-like CLFO_RS00540 7f64d651212112520ec231b85eef3768 459 Gene3D G3DSA:2.160.10.10 244 321 1.8E-18 T 25-04-2017 CLFO_RS00540 7f64d651212112520ec231b85eef3768 459 Gene3D G3DSA:3.90.550.10 1 243 2.2E-78 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00540 7f64d651212112520ec231b85eef3768 459 Pfam PF12804 MobA-like NTP transferase domain 5 130 4.8E-23 T 25-04-2017 IPR025877 MobA-like NTP transferase CLFO_RS00540 7f64d651212112520ec231b85eef3768 459 Gene3D G3DSA:2.160.10.10 322 450 2.9E-31 T 25-04-2017 CLFO_RS00540 7f64d651212112520ec231b85eef3768 459 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 450 5.0E-177 T 25-04-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CLFO_RS00540 7f64d651212112520ec231b85eef3768 459 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 393 427 6.6E-4 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS00540 7f64d651212112520ec231b85eef3768 459 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 317 350 6.7E-7 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS00540 7f64d651212112520ec231b85eef3768 459 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 282 312 1.7E-5 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS12110 e541b251128bec02b4a12c3b215388ba 289 SUPERFAMILY SSF51726 26 219 4.71E-23 T 25-04-2017 CLFO_RS12110 e541b251128bec02b4a12c3b215388ba 289 Gene3D G3DSA:3.20.20.210 22 235 1.9E-21 T 25-04-2017 CLFO_RS12110 e541b251128bec02b4a12c3b215388ba 289 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 18 221 3.5E-24 T 25-04-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CLFO_RS13095 6ff15ae7d0be154a68b83fcc6db15c7a 385 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 192 206 - T 25-04-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLFO_RS13095 6ff15ae7d0be154a68b83fcc6db15c7a 385 Gene3D G3DSA:3.90.1150.10 249 382 1.4E-49 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS13095 6ff15ae7d0be154a68b83fcc6db15c7a 385 PIRSF PIRSF001434 1 384 2.8E-144 T 25-04-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLFO_RS13095 6ff15ae7d0be154a68b83fcc6db15c7a 385 Gene3D G3DSA:3.40.640.10 7 248 3.3E-94 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS13095 6ff15ae7d0be154a68b83fcc6db15c7a 385 SUPERFAMILY SSF53383 22 382 1.38E-113 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS13095 6ff15ae7d0be154a68b83fcc6db15c7a 385 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 382 4.1E-151 T 25-04-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLFO_RS08365 da5183650040e36a591986fc94ab4a9c 151 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 11 144 1.0E-46 T 25-04-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLFO_RS08365 da5183650040e36a591986fc94ab4a9c 151 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 7 25 1.5E-39 T 25-04-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLFO_RS08365 da5183650040e36a591986fc94ab4a9c 151 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 30 48 1.5E-39 T 25-04-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLFO_RS08365 da5183650040e36a591986fc94ab4a9c 151 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 75 93 1.5E-39 T 25-04-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLFO_RS08365 da5183650040e36a591986fc94ab4a9c 151 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 116 135 1.5E-39 T 25-04-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLFO_RS08365 da5183650040e36a591986fc94ab4a9c 151 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 51 69 1.5E-39 T 25-04-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLFO_RS08365 da5183650040e36a591986fc94ab4a9c 151 SUPERFAMILY SSF63411 4 146 2.29E-57 T 25-04-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLFO_RS08365 da5183650040e36a591986fc94ab4a9c 151 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 6 146 2.5E-52 T 25-04-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLFO_RS08365 da5183650040e36a591986fc94ab4a9c 151 Gene3D G3DSA:3.30.1360.80 6 147 3.6E-59 T 25-04-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLFO_RS08365 da5183650040e36a591986fc94ab4a9c 151 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 3 150 33.347 T 25-04-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLFO_RS08365 da5183650040e36a591986fc94ab4a9c 151 PIRSF PIRSF006160 3 151 8.8E-60 T 25-04-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLFO_RS11140 804db51e0b8dec5a5c1e0dbe59a4e90b 519 Pfam PF01514 Secretory protein of YscJ/FliF family 31 222 2.4E-50 T 25-04-2017 IPR006182 Secretory protein YscJ/FliF CLFO_RS11140 804db51e0b8dec5a5c1e0dbe59a4e90b 519 PIRSF PIRSF004862 1 519 7.8E-96 T 25-04-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLFO_RS11140 804db51e0b8dec5a5c1e0dbe59a4e90b 519 Pfam PF08345 Flagellar M-ring protein C-terminal 256 407 3.0E-24 T 25-04-2017 IPR013556 Flagellar M-ring C-terminal CLFO_RS11140 804db51e0b8dec5a5c1e0dbe59a4e90b 519 PRINTS PR01009 Flagellar M-ring protein signature 198 216 3.0E-12 T 25-04-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLFO_RS11140 804db51e0b8dec5a5c1e0dbe59a4e90b 519 PRINTS PR01009 Flagellar M-ring protein signature 269 287 3.0E-12 T 25-04-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLFO_RS11140 804db51e0b8dec5a5c1e0dbe59a4e90b 519 PRINTS PR01009 Flagellar M-ring protein signature 346 370 3.0E-12 T 25-04-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLFO_RS11140 804db51e0b8dec5a5c1e0dbe59a4e90b 519 PRINTS PR01009 Flagellar M-ring protein signature 153 167 3.0E-12 T 25-04-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLFO_RS11140 804db51e0b8dec5a5c1e0dbe59a4e90b 519 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 4 518 1.6E-69 T 25-04-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CLFO_RS03560 cf1fb60832ff3060bd3e749b3cecc9b4 63 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 12 23 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS03560 cf1fb60832ff3060bd3e749b3cecc9b4 63 SUPERFAMILY SSF54862 5 61 9.22E-17 T 25-04-2017 CLFO_RS03560 cf1fb60832ff3060bd3e749b3cecc9b4 63 Pfam PF14697 4Fe-4S dicluster domain 5 55 9.8E-11 T 25-04-2017 CLFO_RS03560 cf1fb60832ff3060bd3e749b3cecc9b4 63 Gene3D G3DSA:3.30.70.20 5 62 6.9E-16 T 25-04-2017 CLFO_RS05815 6b19073df09888eb6349c939a1dc7ca3 105 Gene3D G3DSA:3.30.280.10 1 100 2.4E-46 T 25-04-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05815 6b19073df09888eb6349c939a1dc7ca3 105 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 2.3E-49 T 25-04-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05815 6b19073df09888eb6349c939a1dc7ca3 105 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 2.0E-30 T 25-04-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05815 6b19073df09888eb6349c939a1dc7ca3 105 SUPERFAMILY SSF54111 1 101 8.63E-44 T 25-04-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05815 6b19073df09888eb6349c939a1dc7ca3 105 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 32.41 T 25-04-2017 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05815 6b19073df09888eb6349c939a1dc7ca3 105 PIRSF PIRSF001223 1 100 1.6E-47 T 25-04-2017 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05815 6b19073df09888eb6349c939a1dc7ca3 105 Pfam PF00547 Urease, gamma subunit 1 99 4.6E-45 T 25-04-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS17665 54ca0083cc8136dfd0a1f4b98337ed92 308 Gene3D G3DSA:3.40.1390.20 1 132 2.0E-42 T 25-04-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CLFO_RS17665 54ca0083cc8136dfd0a1f4b98337ed92 308 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 4.1E-73 T 25-04-2017 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 CLFO_RS17665 54ca0083cc8136dfd0a1f4b98337ed92 308 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 4 302 2.3E-118 T 25-04-2017 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 CLFO_RS17665 54ca0083cc8136dfd0a1f4b98337ed92 308 Pfam PF02603 HPr Serine kinase N terminus 4 127 2.1E-41 T 25-04-2017 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 CLFO_RS17665 54ca0083cc8136dfd0a1f4b98337ed92 308 SUPERFAMILY SSF53795 132 298 2.56E-40 T 25-04-2017 CLFO_RS17665 54ca0083cc8136dfd0a1f4b98337ed92 308 Gene3D G3DSA:3.40.50.300 134 303 9.1E-69 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17665 54ca0083cc8136dfd0a1f4b98337ed92 308 SUPERFAMILY SSF75138 4 130 8.24E-35 T 25-04-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CLFO_RS17665 54ca0083cc8136dfd0a1f4b98337ed92 308 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 306 41.248 T 25-04-2017 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 CLFO_RS14545 e586421ae1fd996e67103c74db6ae985 298 SUPERFAMILY SSF51569 7 297 2.09E-79 T 25-04-2017 CLFO_RS14545 e586421ae1fd996e67103c74db6ae985 298 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 165 - T 25-04-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS14545 e586421ae1fd996e67103c74db6ae985 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 1.1E-15 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14545 e586421ae1fd996e67103c74db6ae985 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.1E-15 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14545 e586421ae1fd996e67103c74db6ae985 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 1.1E-15 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14545 e586421ae1fd996e67103c74db6ae985 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.1E-15 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14545 e586421ae1fd996e67103c74db6ae985 298 SMART SM01130 2 296 2.2E-84 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14545 e586421ae1fd996e67103c74db6ae985 298 Gene3D G3DSA:3.20.20.70 7 298 9.2E-85 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS14545 e586421ae1fd996e67103c74db6ae985 298 PIRSF PIRSF001365 1 297 1.0E-71 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14545 e586421ae1fd996e67103c74db6ae985 298 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 25-04-2017 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS14545 e586421ae1fd996e67103c74db6ae985 298 Pfam PF00701 Dihydrodipicolinate synthetase family 6 293 8.4E-69 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS10930 058faec7b101daddafef7d2e7be40afc 263 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 216 242 - T 25-04-2017 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 CLFO_RS10930 058faec7b101daddafef7d2e7be40afc 263 Pfam PF01148 Cytidylyltransferase family 3 256 6.0E-55 T 25-04-2017 CLFO_RS04570 1d9241a1734ea808919031d81482b3cf 273 Pfam PF13847 Methyltransferase domain 57 174 1.0E-15 T 25-04-2017 IPR025714 Methyltransferase domain CLFO_RS04570 1d9241a1734ea808919031d81482b3cf 273 Gene3D G3DSA:3.40.50.150 46 255 4.8E-25 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS04570 1d9241a1734ea808919031d81482b3cf 273 SUPERFAMILY SSF53335 26 233 2.71E-27 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS04930 ba207bc7dc9620648682dc38f7e171ed 346 Pfam PF01497 Periplasmic binding protein 88 288 2.8E-33 T 25-04-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CLFO_RS04930 ba207bc7dc9620648682dc38f7e171ed 346 SUPERFAMILY SSF53807 40 341 1.65E-56 T 25-04-2017 CLFO_RS04930 ba207bc7dc9620648682dc38f7e171ed 346 Gene3D G3DSA:3.40.50.1980 167 317 7.4E-26 T 25-04-2017 CLFO_RS04930 ba207bc7dc9620648682dc38f7e171ed 346 Gene3D G3DSA:3.40.50.1980 36 165 1.8E-21 T 25-04-2017 CLFO_RS17920 01c05ee3a93afaf0a2e77dffa79b89d4 610 Pfam PF00361 Proton-conducting membrane transporter 125 418 3.5E-54 T 25-04-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17920 01c05ee3a93afaf0a2e77dffa79b89d4 610 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 231 255 2.0E-7 T 25-04-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17920 01c05ee3a93afaf0a2e77dffa79b89d4 610 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 161 185 2.0E-7 T 25-04-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS06300 e23aab2d3ffdb409c4250e2e27c6192c 340 SUPERFAMILY SSF53218 170 336 5.5E-35 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS06300 e23aab2d3ffdb409c4250e2e27c6192c 340 Pfam PF00994 Probable molybdopterin binding domain 173 290 9.3E-23 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS06300 e23aab2d3ffdb409c4250e2e27c6192c 340 SMART SM00852 173 305 7.3E-26 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS06300 e23aab2d3ffdb409c4250e2e27c6192c 340 Gene3D G3DSA:3.40.980.10 162 304 2.7E-33 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 435 1.1E-12 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 449 1.1E-12 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 1.1E-12 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 474 1.1E-12 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 494 6.1E-24 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 SUPERFAMILY SSF55874 329 494 2.49E-38 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 Pfam PF00672 HAMP domain 188 253 4.4E-14 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 SMART SM00388 272 339 1.6E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 SMART SM00304 205 257 1.1E-12 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 Gene3D G3DSA:1.10.287.130 264 324 8.0E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 SMART SM00387 384 496 4.9E-31 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 Gene3D G3DSA:3.30.565.10 325 494 8.0E-42 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 Pfam PF00512 His Kinase A (phospho-acceptor) domain 274 337 3.2E-11 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 SUPERFAMILY SSF47384 260 338 2.75E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13690 c24f6d0d0ed31c157cd3c8774ce4e392 503 SUPERFAMILY SSF158472 206 256 7.32E-11 T 25-04-2017 CLFO_RS01460 c6f828eb1c3c999ec4558bd5eca9d8a4 677 Gene3D G3DSA:3.40.50.720 368 548 2.2E-25 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01460 c6f828eb1c3c999ec4558bd5eca9d8a4 677 SUPERFAMILY SSF51735 363 671 7.9E-47 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01460 c6f828eb1c3c999ec4558bd5eca9d8a4 677 Gene3D G3DSA:3.30.1490.20 116 177 2.1E-9 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS01460 c6f828eb1c3c999ec4558bd5eca9d8a4 677 SUPERFAMILY SSF56059 107 312 1.83E-14 T 25-04-2017 CLFO_RS01460 c6f828eb1c3c999ec4558bd5eca9d8a4 677 Gene3D G3DSA:3.40.50.20 3 115 2.0E-24 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS01460 c6f828eb1c3c999ec4558bd5eca9d8a4 677 Gene3D G3DSA:3.30.470.20 214 318 5.9E-9 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS01460 c6f828eb1c3c999ec4558bd5eca9d8a4 677 Pfam PF01370 NAD dependent epimerase/dehydratase family 369 596 1.7E-24 T 25-04-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CLFO_RS01460 c6f828eb1c3c999ec4558bd5eca9d8a4 677 Gene3D G3DSA:3.90.25.10 549 672 8.4E-16 T 25-04-2017 CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 SUPERFAMILY SSF48557 32 470 1.4E-105 T 25-04-2017 IPR008948 L-Aspartase-like GO:0003824 CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 Gene3D G3DSA:1.10.275.10 40 112 5.2E-11 T 25-04-2017 IPR024083 Fumarase/histidase, N-terminal CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 TIGRFAM TIGR00838 argH: argininosuccinate lyase 35 471 2.5E-131 T 25-04-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 Hamap MF_00006 Argininosuccinate lyase [argH]. 5 469 32.288 T 25-04-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 Pfam PF14698 Argininosuccinate lyase C-terminal 370 446 1.8E-16 T 25-04-2017 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 Gene3D G3DSA:1.10.40.30 382 446 1.0E-17 T 25-04-2017 CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 Gene3D G3DSA:1.20.200.10 113 381 5.5E-78 T 25-04-2017 CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 2.8E-35 T 25-04-2017 CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 PRINTS PR00145 Argininosuccinate lyase family signature 199 215 2.8E-35 T 25-04-2017 CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 PRINTS PR00145 Argininosuccinate lyase family signature 237 261 2.8E-35 T 25-04-2017 CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 PRINTS PR00145 Argininosuccinate lyase family signature 107 129 2.8E-35 T 25-04-2017 CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 2.8E-35 T 25-04-2017 CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 5.8E-23 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 5.8E-23 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 5.8E-23 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 5.8E-23 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS06615 624be9a2d0cfd1e71284548272492229 499 Pfam PF00206 Lyase 101 306 4.0E-51 T 25-04-2017 IPR022761 Fumarate lyase, N-terminal CLFO_RS15010 7db3fb84697e0f4bcdf8f6679630fd70 89 SMART SM00116 30 78 1.7E-4 T 25-04-2017 IPR000644 CBS domain CLFO_RS15010 7db3fb84697e0f4bcdf8f6679630fd70 89 Gene3D G3DSA:3.10.580.10 18 74 3.4E-14 T 25-04-2017 CLFO_RS15010 7db3fb84697e0f4bcdf8f6679630fd70 89 SUPERFAMILY SSF54631 19 80 1.05E-16 T 25-04-2017 CLFO_RS15010 7db3fb84697e0f4bcdf8f6679630fd70 89 Pfam PF00571 CBS domain 23 74 1.2E-10 T 25-04-2017 IPR000644 CBS domain CLFO_RS04655 3103efd16176d5292a4675ea3df5fc12 144 SUPERFAMILY SSF54001 8 142 8.83E-18 T 25-04-2017 CLFO_RS04655 3103efd16176d5292a4675ea3df5fc12 144 Pfam PF00877 NlpC/P60 family 21 138 8.4E-8 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS04655 3103efd16176d5292a4675ea3df5fc12 144 Gene3D G3DSA:3.90.1720.10 13 142 5.1E-20 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS16650 c44fc7759932e52ba432217e46804279 234 Pfam PF01522 Polysaccharide deacetylase 44 163 4.4E-29 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS16650 c44fc7759932e52ba432217e46804279 234 Gene3D G3DSA:3.20.20.370 7 231 5.9E-57 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS16650 c44fc7759932e52ba432217e46804279 234 SUPERFAMILY SSF88713 30 232 1.56E-50 T 25-04-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLFO_RS05640 7f2ebe3aa9e3c1f793f73ea42b326b38 261 Pfam PF00809 Pterin binding enzyme 23 232 2.6E-31 T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS05640 7f2ebe3aa9e3c1f793f73ea42b326b38 261 SUPERFAMILY SSF51717 4 260 1.83E-68 T 25-04-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS05640 7f2ebe3aa9e3c1f793f73ea42b326b38 261 Gene3D G3DSA:3.20.20.20 4 259 4.2E-76 T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS06805 dc9632e422edf28836ef35e7cb0b52d5 252 Pfam PF00455 DeoR C terminal sensor domain 75 231 5.8E-57 T 25-04-2017 IPR014036 DeoR C-terminal sensor domain CLFO_RS06805 dc9632e422edf28836ef35e7cb0b52d5 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 2.4E-17 T 25-04-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLFO_RS06805 dc9632e422edf28836ef35e7cb0b52d5 252 Gene3D G3DSA:3.40.50.1360 77 215 4.5E-15 T 25-04-2017 CLFO_RS06805 dc9632e422edf28836ef35e7cb0b52d5 252 SMART SM00420 6 58 1.2E-17 T 25-04-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLFO_RS06805 dc9632e422edf28836ef35e7cb0b52d5 252 SUPERFAMILY SSF100950 74 233 1.42E-36 T 25-04-2017 CLFO_RS06805 dc9632e422edf28836ef35e7cb0b52d5 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.0E-11 T 25-04-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLFO_RS06805 dc9632e422edf28836ef35e7cb0b52d5 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.0E-11 T 25-04-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLFO_RS06805 dc9632e422edf28836ef35e7cb0b52d5 252 SUPERFAMILY SSF46785 4 70 1.61E-16 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06805 dc9632e422edf28836ef35e7cb0b52d5 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 25-04-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLFO_RS06805 dc9632e422edf28836ef35e7cb0b52d5 252 SMART SM01134 73 233 5.9E-77 T 25-04-2017 CLFO_RS06805 dc9632e422edf28836ef35e7cb0b52d5 252 Gene3D G3DSA:1.10.10.10 5 72 2.0E-12 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS08410 dd83583f4e3fde009b259911765b2f65 444 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 436 1.7E-171 T 25-04-2017 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CLFO_RS08410 dd83583f4e3fde009b259911765b2f65 444 Pfam PF13237 4Fe-4S dicluster domain 364 417 6.1E-9 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS08410 dd83583f4e3fde009b259911765b2f65 444 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 104 5.9E-39 T 25-04-2017 IPR026902 RnfC Barrel sandwich hybrid domain CLFO_RS08410 dd83583f4e3fde009b259911765b2f65 444 SUPERFAMILY SSF46548 326 437 6.15E-18 T 25-04-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 CLFO_RS08410 dd83583f4e3fde009b259911765b2f65 444 Pfam PF10531 SLBB domain 287 336 1.6E-13 T 25-04-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS08410 dd83583f4e3fde009b259911765b2f65 444 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 129 274 2.0E-57 T 25-04-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS08410 dd83583f4e3fde009b259911765b2f65 444 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 444 159.547 T 25-04-2017 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CLFO_RS08410 dd83583f4e3fde009b259911765b2f65 444 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 367 378 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS08410 dd83583f4e3fde009b259911765b2f65 444 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 406 417 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS08410 dd83583f4e3fde009b259911765b2f65 444 Gene3D G3DSA:1.10.1060.10 314 441 7.3E-16 T 25-04-2017 CLFO_RS08410 dd83583f4e3fde009b259911765b2f65 444 SUPERFAMILY SSF142019 93 294 2.35E-63 T 25-04-2017 CLFO_RS13435 5db4cb9d67f8a1c909409600135dd3e3 313 Pfam PF14262 Domain of unknown function (DUF4353) 60 305 8.4E-77 T 25-04-2017 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 CLFO_RS05255 e5e6acb8b3c2c1aea1060782cc5d3038 503 SMART SM01208 375 452 7.2E-22 T 25-04-2017 IPR011098 G5 domain CLFO_RS05255 e5e6acb8b3c2c1aea1060782cc5d3038 503 Pfam PF12229 Putative peptidoglycan binding domain 88 202 3.3E-21 T 25-04-2017 IPR022029 Putative peptidoglycan binding domain CLFO_RS05255 e5e6acb8b3c2c1aea1060782cc5d3038 503 Pfam PF04294 VanW like protein 240 368 9.0E-52 T 25-04-2017 IPR007391 Vancomycin resistance VanW CLFO_RS05255 e5e6acb8b3c2c1aea1060782cc5d3038 503 Pfam PF07501 G5 domain 382 451 1.5E-15 T 25-04-2017 IPR011098 G5 domain CLFO_RS06410 f58af22166d617e7442cf9c70a6d84fe 252 SUPERFAMILY SSF88713 3 250 3.26E-101 T 25-04-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLFO_RS06410 f58af22166d617e7442cf9c70a6d84fe 252 Pfam PF03746 LamB/YcsF family 4 241 1.4E-103 T 25-04-2017 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CLFO_RS06410 f58af22166d617e7442cf9c70a6d84fe 252 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 46.197 T 25-04-2017 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CLFO_RS18530 9d9b617e6cc371af4813e63a1464cf1f 563 SMART SM00304 212 264 4.6E-12 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS18530 9d9b617e6cc371af4813e63a1464cf1f 563 Pfam PF00672 HAMP domain 193 260 6.5E-17 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS18530 9d9b617e6cc371af4813e63a1464cf1f 563 SUPERFAMILY SSF58104 232 514 3.53E-68 T 25-04-2017 CLFO_RS18530 9d9b617e6cc371af4813e63a1464cf1f 563 Gene3D G3DSA:1.10.287.950 279 483 5.7E-53 T 25-04-2017 CLFO_RS18530 9d9b617e6cc371af4813e63a1464cf1f 563 SMART SM00283 265 512 1.5E-85 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS18530 9d9b617e6cc371af4813e63a1464cf1f 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 511 1.4E-59 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS18530 9d9b617e6cc371af4813e63a1464cf1f 563 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 2.5E-35 T 25-04-2017 IPR024478 4HB MCP domain CLFO_RS18530 9d9b617e6cc371af4813e63a1464cf1f 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 1.7E-43 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS18530 9d9b617e6cc371af4813e63a1464cf1f 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 1.7E-43 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS18530 9d9b617e6cc371af4813e63a1464cf1f 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 1.7E-43 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS18530 9d9b617e6cc371af4813e63a1464cf1f 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 11 36 1.7E-43 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS18530 9d9b617e6cc371af4813e63a1464cf1f 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 1.7E-43 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS03015 6a18469348ffd99be835e25917c111e2 429 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 1.2E-41 T 25-04-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CLFO_RS03015 6a18469348ffd99be835e25917c111e2 429 SUPERFAMILY SSF54534 96 245 2.55E-35 T 25-04-2017 CLFO_RS03015 6a18469348ffd99be835e25917c111e2 429 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 424 5.8E-43 T 25-04-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CLFO_RS03015 6a18469348ffd99be835e25917c111e2 429 SUPERFAMILY SSF109998 251 428 1.83E-43 T 25-04-2017 IPR027304 Trigger factor/SurA domain CLFO_RS03015 6a18469348ffd99be835e25917c111e2 429 Gene3D G3DSA:1.10.3120.10 206 399 3.7E-59 T 25-04-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CLFO_RS03015 6a18469348ffd99be835e25917c111e2 429 Gene3D G3DSA:3.30.70.1050 1 119 6.2E-34 T 25-04-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CLFO_RS03015 6a18469348ffd99be835e25917c111e2 429 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 240 2.2E-14 T 25-04-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CLFO_RS03015 6a18469348ffd99be835e25917c111e2 429 TIGRFAM TIGR00115 tig: trigger factor 12 423 2.3E-139 T 25-04-2017 IPR005215 Trigger factor GO:0015031 CLFO_RS03015 6a18469348ffd99be835e25917c111e2 429 PIRSF PIRSF003095 1 429 6.8E-129 T 25-04-2017 IPR005215 Trigger factor GO:0015031 CLFO_RS03015 6a18469348ffd99be835e25917c111e2 429 Hamap MF_00303 Trigger factor [tig]. 1 429 23.012 T 25-04-2017 IPR005215 Trigger factor GO:0015031 CLFO_RS03015 6a18469348ffd99be835e25917c111e2 429 SUPERFAMILY SSF102735 1 131 4.05E-35 T 25-04-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 Pfam PF00672 HAMP domain 293 360 7.7E-11 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 Pfam PF00563 EAL domain 543 776 2.8E-69 T 25-04-2017 IPR001633 EAL domain CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 Gene3D G3DSA:3.30.450.20 81 160 6.9E-4 T 25-04-2017 CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 SUPERFAMILY SSF55073 370 527 8.63E-36 T 25-04-2017 IPR029787 Nucleotide cyclase CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 Gene3D G3DSA:3.30.450.20 161 285 3.2E-21 T 25-04-2017 CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 SMART SM00304 313 365 1.8E-9 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 SUPERFAMILY SSF158472 316 362 5.1E-7 T 25-04-2017 CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 SUPERFAMILY SSF141868 541 789 1.96E-88 T 25-04-2017 IPR001633 EAL domain CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 SMART SM00052 535 781 3.9E-116 T 25-04-2017 IPR001633 EAL domain CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 Pfam PF02743 Cache domain 45 275 5.7E-29 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 524 3.3E-29 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 SMART SM00267 353 525 4.8E-31 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 Pfam PF00990 Diguanylate cyclase, GGDEF domain 365 519 1.6E-35 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 SUPERFAMILY SSF103190 79 185 9.61E-7 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 Gene3D G3DSA:3.20.20.450 539 789 5.8E-97 T 25-04-2017 IPR001633 EAL domain CLFO_RS15530 67388122df5abc539ccc055054ed1f60 793 Gene3D G3DSA:3.30.70.270 365 532 1.2E-40 T 25-04-2017 CLFO_RS19310 be08428d7e2733a8ca44f2c2380982e1 365 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 6 357 3.2E-111 T 25-04-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CLFO_RS19310 be08428d7e2733a8ca44f2c2380982e1 365 SUPERFAMILY SSF53597 144 363 9.51E-58 T 25-04-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CLFO_RS19310 be08428d7e2733a8ca44f2c2380982e1 365 SUPERFAMILY SSF53927 1 140 9.97E-48 T 25-04-2017 IPR016193 Cytidine deaminase-like GO:0003824 CLFO_RS19310 be08428d7e2733a8ca44f2c2380982e1 365 Pfam PF01872 RibD C-terminal domain 146 352 4.6E-52 T 25-04-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CLFO_RS19310 be08428d7e2733a8ca44f2c2380982e1 365 Gene3D G3DSA:3.40.430.10 127 363 7.1E-78 T 25-04-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CLFO_RS19310 be08428d7e2733a8ca44f2c2380982e1 365 PIRSF PIRSF006769 1 365 1.3E-135 T 25-04-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CLFO_RS19310 be08428d7e2733a8ca44f2c2380982e1 365 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 25-04-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLFO_RS19310 be08428d7e2733a8ca44f2c2380982e1 365 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 98 1.7E-20 T 25-04-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CLFO_RS19310 be08428d7e2733a8ca44f2c2380982e1 365 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 145 361 1.1E-67 T 25-04-2017 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CLFO_RS19310 be08428d7e2733a8ca44f2c2380982e1 365 Gene3D G3DSA:3.40.140.10 2 126 3.0E-36 T 25-04-2017 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SMART SM00823 Phosphopantetheine attachment site 3138 3209 2.2E-6 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SMART SM00823 Phosphopantetheine attachment site 1569 1639 8.2E-5 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SMART SM00823 Phosphopantetheine attachment site 63 133 4.6E-8 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1958 2075 1.1E-41 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3496 3613 4.8E-39 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 452 569 1.4E-42 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:1.10.1200.10 1568 1642 1.1E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:1.10.1200.10 3140 3263 1.5E-16 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:1.10.1200.10 60 136 2.4E-15 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:1.10.1200.10 174 195 2.4E-15 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:1.10.1200.10 1681 1705 1.1E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:3.40.47.10 1706 1962 1.6E-88 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 ProSitePatterns PS00012 Phosphopantetheine attachment site. 89 104 - T 25-04-2017 IPR006162 Phosphopantetheine attachment site CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF08659 KR domain 4337 4522 2.8E-58 T 25-04-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF08659 KR domain 2866 3045 1.8E-47 T 25-04-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF08659 KR domain 1299 1484 3.6E-58 T 25-04-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF51735 2864 3085 2.12E-33 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF14765 Polyketide synthase dehydratase 822 1109 2.0E-61 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF14765 Polyketide synthase dehydratase 2328 2615 2.7E-57 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF14765 Polyketide synthase dehydratase 3860 4147 2.1E-61 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF47336 3242 3272 4.32E-14 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF47336 3140 3210 4.32E-14 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3401 3417 - T 25-04-2017 IPR018201 Beta-ketoacyl synthase, active site CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF51735 4333 4561 6.2E-40 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF53901 1696 2068 2.81E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF53901 2113 2132 2.81E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:3.40.50.720 2864 3086 2.2E-46 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:3.40.50.720 1297 1488 2.2E-54 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:3.40.50.720 4335 4543 1.2E-55 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF51735 1295 1524 2.11E-39 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF47336 64 134 4.84E-12 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF53901 3255 3604 8.05E-86 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4337 4523 1.1E-48 T 25-04-2017 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1299 1485 6.3E-49 T 25-04-2017 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2866 3046 8.1E-37 T 25-04-2017 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 573 691 1.8E-13 T 25-04-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2079 2197 7.0E-13 T 25-04-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3617 3734 4.1E-11 T 25-04-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:3.40.47.10 3264 3500 2.7E-83 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:3.40.47.10 196 456 1.0E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:3.40.47.10 3501 3665 3.2E-50 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:3.40.47.10 1963 2136 1.2E-54 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Gene3D G3DSA:3.40.47.10 457 630 3.2E-55 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF47336 1569 1640 2.49E-10 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF47336 1681 1709 2.49E-10 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SMART SM00826 3860 4027 2.2E-17 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SMART SM00826 822 989 1.2E-18 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SMART SM00826 2328 2495 6.3E-10 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1697 1950 4.1E-81 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 191 444 1.4E-89 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3258 3488 3.3E-71 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF53901 189 562 4.71E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SUPERFAMILY SSF53901 607 626 4.71E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SMART SM00825 Beta-ketoacyl synthase 192 631 3.5E-209 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SMART SM00825 Beta-ketoacyl synthase 3260 3666 4.7E-157 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 SMART SM00825 Beta-ketoacyl synthase 1699 2137 3.8E-192 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF00550 Phosphopantetheine attachment site 66 128 3.8E-12 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF00550 Phosphopantetheine attachment site 1571 1634 2.3E-10 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04835 2fbd210916b70fcafec98e3b116c757d 4623 Pfam PF00550 Phosphopantetheine attachment site 3141 3204 6.8E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS07610 30d38533e5ca94a4b50f441fdac9666b 117 Pfam PF11535 Calcium binding 28 114 1.4E-13 T 25-04-2017 IPR020994 Uncharacterised protein family, calcium binding protein, CcbP CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 Gene3D G3DSA:1.10.8.60 321 396 2.8E-23 T 25-04-2017 CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 SUPERFAMILY SSF55785 9 103 3.49E-12 T 25-04-2017 IPR000014 PAS domain CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 SMART SM00091 9 75 3.5E-5 T 25-04-2017 IPR000014 PAS domain CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 Gene3D G3DSA:3.30.450.20 8 65 4.2E-9 T 25-04-2017 CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 Pfam PF02954 Bacterial regulatory protein, Fis family 412 453 4.6E-13 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 SUPERFAMILY SSF52540 147 382 1.42E-71 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 Pfam PF00158 Sigma-54 interaction domain 147 315 9.5E-70 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 98 5.4E-6 T 25-04-2017 IPR000014 PAS domain CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 436 1.3E-7 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 456 1.3E-7 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 Gene3D G3DSA:1.10.10.60 400 455 7.8E-17 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 Gene3D G3DSA:3.40.50.300 144 320 5.2E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 SMART SM00382 167 311 2.2E-9 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15230 576dbfc954b231de73c416a5ca19425c 458 SUPERFAMILY SSF46689 361 455 2.33E-15 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16160 e0e9aa98feafa7fb8ff0d3ad3c48ca13 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 1.3E-15 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS16160 e0e9aa98feafa7fb8ff0d3ad3c48ca13 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 1.3E-15 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS16160 e0e9aa98feafa7fb8ff0d3ad3c48ca13 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 1.3E-15 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS16160 e0e9aa98feafa7fb8ff0d3ad3c48ca13 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 1.3E-15 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS16160 e0e9aa98feafa7fb8ff0d3ad3c48ca13 150 Gene3D G3DSA:1.10.10.10 4 136 1.3E-32 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16160 e0e9aa98feafa7fb8ff0d3ad3c48ca13 150 SUPERFAMILY SSF46785 4 137 5.68E-31 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16160 e0e9aa98feafa7fb8ff0d3ad3c48ca13 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 25-04-2017 IPR023187 Transcriptional regulator MarR-type, conserved site CLFO_RS16160 e0e9aa98feafa7fb8ff0d3ad3c48ca13 150 Pfam PF01047 MarR family 32 85 3.3E-15 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS16160 e0e9aa98feafa7fb8ff0d3ad3c48ca13 150 SMART SM00347 21 121 2.6E-24 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS18185 331ba7582134ba0687ed02f45b607988 815 Gene3D G3DSA:3.40.50.2000 475 795 1.2E-127 T 25-04-2017 CLFO_RS18185 331ba7582134ba0687ed02f45b607988 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 8 810 0.0 T 25-04-2017 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CLFO_RS18185 331ba7582134ba0687ed02f45b607988 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 649 661 - T 25-04-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CLFO_RS18185 331ba7582134ba0687ed02f45b607988 815 SUPERFAMILY SSF53756 5 813 0.0 T 25-04-2017 CLFO_RS18185 331ba7582134ba0687ed02f45b607988 815 Gene3D G3DSA:3.40.50.2000 5 474 4.0E-196 T 25-04-2017 CLFO_RS18185 331ba7582134ba0687ed02f45b607988 815 PIRSF PIRSF000460 2 815 3.1E-226 T 25-04-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CLFO_RS18185 331ba7582134ba0687ed02f45b607988 815 Pfam PF00343 Carbohydrate phosphorylase 97 810 0.0 T 25-04-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CLFO_RS19580 8875674834db3d6539d6c9dd2454a4ee 37 Pfam PF00444 Ribosomal protein L36 1 37 1.2E-18 T 25-04-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19580 8875674834db3d6539d6c9dd2454a4ee 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 25-04-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19580 8875674834db3d6539d6c9dd2454a4ee 37 SUPERFAMILY SSF57840 1 37 8.24E-17 T 25-04-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19580 8875674834db3d6539d6c9dd2454a4ee 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 3.5E-24 T 25-04-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19580 8875674834db3d6539d6c9dd2454a4ee 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 4.0E-8 T 25-04-2017 CLFO_RS19580 8875674834db3d6539d6c9dd2454a4ee 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.381 T 25-04-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS01310 7d3e61b13cb7a0f6df5a0e1cbc214519 155 Pfam PF06695 Putative small multi-drug export protein 24 144 2.5E-38 T 25-04-2017 IPR009577 Putative small multi-drug export CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 SUPERFAMILY SSF52343 89 256 6.68E-32 T 25-04-2017 CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 Gene3D G3DSA:2.10.240.10 225 256 2.1E-12 T 25-04-2017 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 Gene3D G3DSA:3.40.50.80 85 213 3.6E-31 T 25-04-2017 CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 PRINTS PR00410 Phenol hydroxylase reductase family signature 105 124 4.0E-8 T 25-04-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 PRINTS PR00410 Phenol hydroxylase reductase family signature 33 45 4.0E-8 T 25-04-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 PRINTS PR00410 Phenol hydroxylase reductase family signature 194 202 4.0E-8 T 25-04-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 PIRSF PIRSF006816 4 262 2.7E-70 T 25-04-2017 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 Pfam PF00175 Oxidoreductase NAD-binding domain 108 207 9.8E-16 T 25-04-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 TIGRFAM TIGR02911 sulfite_red_B: sulfite reductase, subunit B 3 262 8.1E-113 T 25-04-2017 IPR014260 Sulphite reductase, subunit B CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 Gene3D G3DSA:2.40.30.10 33 84 8.6E-12 T 25-04-2017 CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 Pfam PF00970 Oxidoreductase FAD-binding domain 50 92 1.7E-4 T 25-04-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 225 256 1.0E-8 T 25-04-2017 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLFO_RS20235 53d0c0b18ac9610ce906eb5c4b2d43c9 262 SUPERFAMILY SSF63380 6 94 1.02E-17 T 25-04-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLFO_RS20970 05fde2be65ffc266329253e63b9e9ea4 266 SUPERFAMILY SSF56281 1 226 2.49E-46 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS20970 05fde2be65ffc266329253e63b9e9ea4 266 Pfam PF00753 Metallo-beta-lactamase superfamily 12 218 1.6E-22 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS20970 05fde2be65ffc266329253e63b9e9ea4 266 Gene3D G3DSA:3.60.15.10 11 156 3.5E-36 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS20970 05fde2be65ffc266329253e63b9e9ea4 266 Gene3D G3DSA:3.60.15.10 188 233 3.5E-36 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS20970 05fde2be65ffc266329253e63b9e9ea4 266 SMART SM00849 13 191 4.3E-13 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS01135 f1ddca39c4d7d798eab5f6e7a0183d8a 369 Pfam PF00534 Glycosyl transferases group 1 184 341 7.9E-26 T 25-04-2017 IPR001296 Glycosyl transferase, family 1 CLFO_RS01135 f1ddca39c4d7d798eab5f6e7a0183d8a 369 SUPERFAMILY SSF53756 19 365 1.53E-58 T 25-04-2017 CLFO_RS01135 f1ddca39c4d7d798eab5f6e7a0183d8a 369 Pfam PF13477 Glycosyl transferase 4-like 3 147 2.1E-22 T 25-04-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CLFO_RS01135 f1ddca39c4d7d798eab5f6e7a0183d8a 369 Gene3D G3DSA:3.40.50.2000 184 333 3.8E-16 T 25-04-2017 CLFO_RS04470 5724533213d2ec3b81f91fb54f5b1538 375 Gene3D G3DSA:3.90.1720.10 207 336 0.001 T 25-04-2017 IPR000064 Endopeptidase, NLPC/P60 domain CLFO_RS04470 5724533213d2ec3b81f91fb54f5b1538 375 Pfam PF12671 Putative amidase domain 211 370 6.5E-45 T 25-04-2017 IPR024301 Putative amidase domain CLFO_RS04130 f1c3f48aad3f9f5d7d77c1ee4ffe7411 414 Gene3D G3DSA:3.30.465.10 332 412 5.9E-25 T 25-04-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLFO_RS04130 f1c3f48aad3f9f5d7d77c1ee4ffe7411 414 SUPERFAMILY SSF54631 199 339 4.55E-32 T 25-04-2017 CLFO_RS04130 f1c3f48aad3f9f5d7d77c1ee4ffe7411 414 SMART SM00116 275 323 4.8 T 25-04-2017 IPR000644 CBS domain CLFO_RS04130 f1c3f48aad3f9f5d7d77c1ee4ffe7411 414 SMART SM00116 213 264 3.2 T 25-04-2017 IPR000644 CBS domain CLFO_RS04130 f1c3f48aad3f9f5d7d77c1ee4ffe7411 414 Pfam PF00571 CBS domain 278 323 3.0E-6 T 25-04-2017 IPR000644 CBS domain CLFO_RS04130 f1c3f48aad3f9f5d7d77c1ee4ffe7411 414 Pfam PF00571 CBS domain 205 258 9.4E-6 T 25-04-2017 IPR000644 CBS domain CLFO_RS04130 f1c3f48aad3f9f5d7d77c1ee4ffe7411 414 SMART SM01091 338 414 1.5E-19 T 25-04-2017 IPR005170 Transporter-associated domain CLFO_RS04130 f1c3f48aad3f9f5d7d77c1ee4ffe7411 414 Gene3D G3DSA:3.10.580.10 190 331 1.1E-23 T 25-04-2017 CLFO_RS04130 f1c3f48aad3f9f5d7d77c1ee4ffe7411 414 Pfam PF03471 Transporter associated domain 339 412 7.0E-20 T 25-04-2017 IPR005170 Transporter-associated domain CLFO_RS04130 f1c3f48aad3f9f5d7d77c1ee4ffe7411 414 Pfam PF01595 Domain of unknown function DUF21 10 188 1.4E-52 T 25-04-2017 IPR002550 Domain of unknown function DUF21 CLFO_RS04130 f1c3f48aad3f9f5d7d77c1ee4ffe7411 414 SUPERFAMILY SSF56176 336 413 2.43E-19 T 25-04-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 Gene3D G3DSA:1.10.287.80 199 232 5.9E-28 T 25-04-2017 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 Gene3D G3DSA:1.10.287.80 16 57 5.9E-28 T 25-04-2017 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 Gene3D G3DSA:3.40.1380.10 61 185 1.4E-45 T 25-04-2017 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 284 1.1E-100 T 25-04-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 SUPERFAMILY SSF52943 2 284 2.35E-90 T 25-04-2017 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 PRINTS PR00126 ATP synthase gamma subunit signature 70 89 9.7E-40 T 25-04-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 PRINTS PR00126 ATP synthase gamma subunit signature 231 250 9.7E-40 T 25-04-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 PRINTS PR00126 ATP synthase gamma subunit signature 159 176 9.7E-40 T 25-04-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 PRINTS PR00126 ATP synthase gamma subunit signature 262 283 9.7E-40 T 25-04-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 270 283 - T 25-04-2017 IPR023632 ATPase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 Gene3D G3DSA:1.10.287.80 233 279 5.8E-30 T 25-04-2017 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 284 34.618 T 25-04-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS01025 f5a86d7ce675c6422f65859859da4ba2 285 Pfam PF00231 ATP synthase 1 284 9.1E-97 T 25-04-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 CLFO_RS08085 52c6ab444598313c0a5354ec223f0e87 252 SUPERFAMILY SSF52540 76 235 3.16E-13 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08085 52c6ab444598313c0a5354ec223f0e87 252 Pfam PF01695 IstB-like ATP binding protein 68 218 5.1E-15 T 25-04-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 CLFO_RS08085 52c6ab444598313c0a5354ec223f0e87 252 Gene3D G3DSA:3.40.50.300 50 232 1.3E-27 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20575 43b08f93050797b0e9d002766684070f 380 TIGRFAM TIGR00277 HDIG: HDIG domain 211 300 5.6E-10 T 25-04-2017 IPR006675 HDIG domain CLFO_RS20575 43b08f93050797b0e9d002766684070f 380 Gene3D G3DSA:1.10.3210.10 205 376 2.2E-24 T 25-04-2017 IPR006674 HD domain CLFO_RS20575 43b08f93050797b0e9d002766684070f 380 SUPERFAMILY SSF109604 193 372 5.8E-40 T 25-04-2017 CLFO_RS20575 43b08f93050797b0e9d002766684070f 380 Pfam PF01966 HD domain 212 332 4.7E-19 T 25-04-2017 IPR006674 HD domain CLFO_RS20575 43b08f93050797b0e9d002766684070f 380 Gene3D G3DSA:3.30.450.40 17 182 1.7E-12 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS20575 43b08f93050797b0e9d002766684070f 380 SUPERFAMILY SSF55781 21 183 1.55E-12 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS20575 43b08f93050797b0e9d002766684070f 380 SMART SM00471 206 341 1.5E-8 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS04060 4a6cfd2a4b56ae14e74729f8b5ea4756 247 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 27 234 1.8E-56 T 25-04-2017 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 CLFO_RS04060 4a6cfd2a4b56ae14e74729f8b5ea4756 247 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 26 235 1.9E-82 T 25-04-2017 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 CLFO_RS04060 4a6cfd2a4b56ae14e74729f8b5ea4756 247 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 26 241 27.528 T 25-04-2017 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 CLFO_RS05045 95a240480f28b53124dfd34c3762c2d2 393 Pfam PF00202 Aminotransferase class-III 18 390 5.4E-99 T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS05045 95a240480f28b53124dfd34c3762c2d2 393 Gene3D G3DSA:3.40.640.10 57 297 1.7E-73 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS05045 95a240480f28b53124dfd34c3762c2d2 393 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 217 254 - T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS05045 95a240480f28b53124dfd34c3762c2d2 393 Gene3D G3DSA:3.90.1150.10 300 392 2.5E-34 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS05045 95a240480f28b53124dfd34c3762c2d2 393 Gene3D G3DSA:3.90.1150.10 5 56 2.5E-34 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS05045 95a240480f28b53124dfd34c3762c2d2 393 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 10 391 37.04 T 25-04-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CLFO_RS05045 95a240480f28b53124dfd34c3762c2d2 393 SUPERFAMILY SSF53383 11 392 4.23E-105 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS01105 4157a636622d455d42aa91079c4d47a3 227 Pfam PF02706 Chain length determinant protein 4 141 1.9E-27 T 25-04-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 CLFO_RS01105 4157a636622d455d42aa91079c4d47a3 227 Pfam PF13807 G-rich domain on putative tyrosine kinase 130 194 5.3E-12 T 25-04-2017 IPR032807 Tyrosine kinase, G-rich domain CLFO_RS17465 38803adc313706862c020e73932b17e2 779 Gene3D G3DSA:3.20.20.140 21 278 1.8E-55 T 25-04-2017 CLFO_RS17465 38803adc313706862c020e73932b17e2 779 SUPERFAMILY SSF89550 21 285 1.06E-43 T 25-04-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLFO_RS17465 38803adc313706862c020e73932b17e2 779 SMART SM00481 22 89 3.3E-32 T 25-04-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLFO_RS17465 38803adc313706862c020e73932b17e2 779 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 313 732 1.3E-178 T 25-04-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS17465 38803adc313706862c020e73932b17e2 779 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 21 777 0.0 T 25-04-2017 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS17465 38803adc313706862c020e73932b17e2 779 Pfam PF02811 PHP domain 23 195 2.4E-54 T 25-04-2017 IPR004013 PHP domain GO:0003824 CLFO_RS10950 4749674a3afdacc0ccf3197eb8e5b86e 238 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 235 4.0E-98 T 25-04-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CLFO_RS10950 4749674a3afdacc0ccf3197eb8e5b86e 238 Pfam PF00696 Amino acid kinase family 7 214 3.1E-28 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS10950 4749674a3afdacc0ccf3197eb8e5b86e 238 PIRSF PIRSF005650 1 238 2.0E-96 T 25-04-2017 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CLFO_RS10950 4749674a3afdacc0ccf3197eb8e5b86e 238 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 235 44.114 T 25-04-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CLFO_RS10950 4749674a3afdacc0ccf3197eb8e5b86e 238 SUPERFAMILY SSF53633 4 235 3.67E-73 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS10950 4749674a3afdacc0ccf3197eb8e5b86e 238 Gene3D G3DSA:3.40.1160.10 3 235 1.6E-85 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS18835 b8bc5457988e213f33f2052a75e3a040 539 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 374 489 8.9E-37 T 25-04-2017 IPR025299 CstA, C-terminal domain CLFO_RS18835 b8bc5457988e213f33f2052a75e3a040 539 Pfam PF02554 Carbon starvation protein CstA 1 346 2.2E-133 T 25-04-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CLFO_RS03740 7c2196a2a7646cb23751663181864a2b 470 Pfam PF02614 Glucuronate isomerase 1 464 1.7E-234 T 25-04-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CLFO_RS03740 7c2196a2a7646cb23751663181864a2b 470 Gene3D G3DSA:3.20.20.140 138 465 3.1E-164 T 25-04-2017 CLFO_RS03740 7c2196a2a7646cb23751663181864a2b 470 Gene3D G3DSA:3.20.20.140 3 44 3.1E-164 T 25-04-2017 CLFO_RS03740 7c2196a2a7646cb23751663181864a2b 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 466 51.93 T 25-04-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CLFO_RS03740 7c2196a2a7646cb23751663181864a2b 470 Gene3D G3DSA:1.10.2020.10 47 135 4.5E-44 T 25-04-2017 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CLFO_RS03740 7c2196a2a7646cb23751663181864a2b 470 SUPERFAMILY SSF51556 2 465 1.7E-194 T 25-04-2017 IPR032466 Metal-dependent hydrolase CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 SUPERFAMILY SSF48452 835 990 1.19E-15 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 SMART SM01043 97 229 4.3E-13 T 25-04-2017 IPR005158 Bacterial transcriptional activator domain CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 Pfam PF13191 AAA ATPase domain 247 424 2.3E-22 T 25-04-2017 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 SMART SM00028 917 950 40.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 SMART SM00028 712 745 55.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 SMART SM00028 837 870 0.0056 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 SMART SM00028 877 910 0.28 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 SMART SM00028 792 825 79.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 SMART SM00028 179 212 170.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 Gene3D G3DSA:1.25.40.10 841 986 1.7E-13 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 Gene3D G3DSA:1.25.40.10 711 840 2.8E-11 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 Gene3D G3DSA:1.25.40.10 180 205 2.8E-11 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 Gene3D G3DSA:1.25.40.10 488 489 2.8E-11 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 Pfam PF03704 Bacterial transcriptional activator domain 108 228 9.9E-14 T 25-04-2017 IPR005158 Bacterial transcriptional activator domain CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 SUPERFAMILY SSF48452 132 229 1.33E-10 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 SUPERFAMILY SSF52540 244 518 1.02E-17 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 SUPERFAMILY SSF48452 712 825 4.64E-9 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 Gene3D G3DSA:3.40.50.300 238 308 3.2E-10 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 Gene3D G3DSA:3.40.50.300 362 434 3.2E-10 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17540 6916721b1d54431be55401b31ca78b35 1019 Pfam PF13432 Tetratricopeptide repeat 882 943 0.0022 T 25-04-2017 CLFO_RS16870 00af1eea1f090045ec8fe53c9ad90806 335 SUPERFAMILY SSF81345 4 333 2.48E-75 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS16870 00af1eea1f090045ec8fe53c9ad90806 335 Pfam PF01032 FecCD transport family 16 333 8.1E-88 T 25-04-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CLFO_RS16870 00af1eea1f090045ec8fe53c9ad90806 335 Gene3D G3DSA:1.10.3470.10 2 335 5.3E-94 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS01395 fd79640115c7d8bebee9a9575ccecc5c 375 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 2 352 1.1E-126 T 25-04-2017 IPR026385 Aminotransferase, LLPSF_NHT_00031 family CLFO_RS01395 fd79640115c7d8bebee9a9575ccecc5c 375 SUPERFAMILY SSF53383 2 371 1.55E-113 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS01395 fd79640115c7d8bebee9a9575ccecc5c 375 Gene3D G3DSA:3.90.1150.10 250 371 5.6E-29 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS01395 fd79640115c7d8bebee9a9575ccecc5c 375 PIRSF PIRSF000390 1 372 5.0E-113 T 25-04-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLFO_RS01395 fd79640115c7d8bebee9a9575ccecc5c 375 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 367 4.8E-115 T 25-04-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLFO_RS01395 fd79640115c7d8bebee9a9575ccecc5c 375 Gene3D G3DSA:3.40.640.10 1 247 1.7E-88 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS16350 45fbd5d60d34258bd64b512524018719 216 SUPERFAMILY SSF52242 78 216 5.36E-40 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS16350 45fbd5d60d34258bd64b512524018719 216 SUPERFAMILY SSF47644 8 87 4.97E-17 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS16350 45fbd5d60d34258bd64b512524018719 216 Gene3D G3DSA:1.10.1240.10 9 81 9.8E-11 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS16350 45fbd5d60d34258bd64b512524018719 216 Pfam PF02607 B12 binding domain 9 83 1.4E-12 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS16350 45fbd5d60d34258bd64b512524018719 216 Gene3D G3DSA:3.40.50.280 82 216 5.5E-45 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS16350 45fbd5d60d34258bd64b512524018719 216 Pfam PF02310 B12 binding domain 96 198 5.3E-22 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS16350 45fbd5d60d34258bd64b512524018719 216 SMART SM01018 5 90 2.4E-16 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS13375 cfb050942b7253d4a704218a09fb9d4f 129 SUPERFAMILY SSF50630 25 116 2.51E-7 T 25-04-2017 IPR021109 Aspartic peptidase domain CLFO_RS13375 cfb050942b7253d4a704218a09fb9d4f 129 Pfam PF13650 Aspartyl protease 24 106 7.4E-12 T 25-04-2017 CLFO_RS00265 ba445831234f982c5de6a9bebb9e21e3 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 414 1.1E-117 T 25-04-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLFO_RS00265 ba445831234f982c5de6a9bebb9e21e3 418 SUPERFAMILY SSF69742 1 158 2.22E-40 T 25-04-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLFO_RS00265 ba445831234f982c5de6a9bebb9e21e3 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 7 156 1.9E-41 T 25-04-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLFO_RS00265 ba445831234f982c5de6a9bebb9e21e3 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 173 305 8.8E-35 T 25-04-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CLFO_RS00265 ba445831234f982c5de6a9bebb9e21e3 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 417 5.7E-16 T 25-04-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLFO_RS00265 ba445831234f982c5de6a9bebb9e21e3 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 415 26.449 T 25-04-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLFO_RS00265 ba445831234f982c5de6a9bebb9e21e3 418 PIRSF PIRSF000445 1 418 5.9E-132 T 25-04-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLFO_RS00265 ba445831234f982c5de6a9bebb9e21e3 418 SUPERFAMILY SSF51735 163 314 3.74E-29 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS00265 ba445831234f982c5de6a9bebb9e21e3 418 SUPERFAMILY SSF69075 317 404 1.31E-11 T 25-04-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLFO_RS00265 ba445831234f982c5de6a9bebb9e21e3 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 25-04-2017 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CLFO_RS00265 ba445831234f982c5de6a9bebb9e21e3 418 Gene3D G3DSA:3.40.50.720 164 311 4.1E-29 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04115 42e050867d716dc9fa7fd613970fe817 220 SUPERFAMILY SSF52172 2 129 5.69E-34 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS04115 42e050867d716dc9fa7fd613970fe817 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 217 1.1E-20 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS04115 42e050867d716dc9fa7fd613970fe817 220 Gene3D G3DSA:1.10.10.10 128 218 1.5E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS04115 42e050867d716dc9fa7fd613970fe817 220 Pfam PF00072 Response regulator receiver domain 5 111 1.8E-23 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS04115 42e050867d716dc9fa7fd613970fe817 220 Gene3D G3DSA:3.40.50.2300 2 121 1.5E-35 T 25-04-2017 CLFO_RS04115 42e050867d716dc9fa7fd613970fe817 220 SUPERFAMILY SSF46894 121 218 1.56E-24 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS04115 42e050867d716dc9fa7fd613970fe817 220 SMART SM00862 146 217 4.1E-18 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS04115 42e050867d716dc9fa7fd613970fe817 220 SMART SM00448 3 113 1.2E-34 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 Gene3D G3DSA:1.10.287.130 306 365 4.6E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 Pfam PF00072 Response regulator receiver domain 567 678 5.9E-29 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 540 5.0E-25 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 SUPERFAMILY SSF55874 368 537 5.76E-45 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 SUPERFAMILY SSF52172 564 691 1.57E-39 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 SUPERFAMILY SSF47226 661 674 3.27E-19 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 SUPERFAMILY SSF47226 701 798 3.27E-19 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 Gene3D G3DSA:3.40.50.2300 563 690 2.0E-41 T 25-04-2017 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 SMART SM00388 314 379 8.6E-22 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 SUPERFAMILY SSF47384 301 380 6.08E-22 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 Gene3D G3DSA:3.30.565.10 366 539 1.5E-43 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 Pfam PF00512 His Kinase A (phospho-acceptor) domain 314 379 1.1E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 Gene3D G3DSA:1.20.120.160 713 810 1.9E-19 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 SMART SM00448 565 678 2.2E-39 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 SMART SM00387 426 542 3.8E-36 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 Pfam PF01627 Hpt domain 722 787 8.8E-9 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 539 8.1E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 495 8.1E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 520 8.1E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS05780 3d1ff8180ac1bb720c2925dec7afa0a0 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 8.1E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13365 921d99541711032c0c578f30c2678814 213 Gene3D G3DSA:3.40.50.10420 11 154 1.4E-7 T 25-04-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CLFO_RS13365 921d99541711032c0c578f30c2678814 213 SUPERFAMILY SSF100950 10 155 7.11E-6 T 25-04-2017 CLFO_RS13365 921d99541711032c0c578f30c2678814 213 PIRSF PIRSF020269 1 213 9.9E-90 T 25-04-2017 IPR009501 Uncharacterised conserved protein UCP020269 CLFO_RS13365 921d99541711032c0c578f30c2678814 213 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 13 207 5.7E-56 T 25-04-2017 IPR003741 LUD domain CLFO_RS12145 9a9aca90c53ce19327b4ddee654a7f2b 436 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 100 314 4.1E-37 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS12145 9a9aca90c53ce19327b4ddee654a7f2b 436 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 43 406 1.9E-127 T 25-04-2017 IPR030931 Group II intron reverse transcriptase/maturase CLFO_RS12145 9a9aca90c53ce19327b4ddee654a7f2b 436 SUPERFAMILY SSF56672 35 336 5.34E-49 T 25-04-2017 CLFO_RS12145 9a9aca90c53ce19327b4ddee654a7f2b 436 Pfam PF08388 Group II intron, maturase-specific domain 340 413 3.0E-9 T 25-04-2017 IPR013597 Group II intron, maturase-specific CLFO_RS13990 5547cea88b2319c8c1af20fc5f13c9bf 65 SMART SM00357 2 65 2.9E-29 T 25-04-2017 IPR011129 Cold shock protein GO:0003676 CLFO_RS13990 5547cea88b2319c8c1af20fc5f13c9bf 65 Gene3D G3DSA:2.40.50.140 2 64 4.7E-31 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS13990 5547cea88b2319c8c1af20fc5f13c9bf 65 PRINTS PR00050 Cold shock protein signature 23 32 6.2E-18 T 25-04-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLFO_RS13990 5547cea88b2319c8c1af20fc5f13c9bf 65 PRINTS PR00050 Cold shock protein signature 38 56 6.2E-18 T 25-04-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLFO_RS13990 5547cea88b2319c8c1af20fc5f13c9bf 65 PRINTS PR00050 Cold shock protein signature 3 18 6.2E-18 T 25-04-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLFO_RS13990 5547cea88b2319c8c1af20fc5f13c9bf 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 32 - T 25-04-2017 IPR019844 Cold-shock conserved site CLFO_RS13990 5547cea88b2319c8c1af20fc5f13c9bf 65 Pfam PF00313 'Cold-shock' DNA-binding domain 1 63 4.7E-30 T 25-04-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLFO_RS13990 5547cea88b2319c8c1af20fc5f13c9bf 65 PIRSF PIRSF002599 1 65 2.3E-24 T 25-04-2017 IPR012156 Cold shock, CspA GO:0003676 CLFO_RS13990 5547cea88b2319c8c1af20fc5f13c9bf 65 SUPERFAMILY SSF50249 2 64 8.78E-24 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS12515 f29559fb84b28b9af5350b1400468d23 378 Pfam PF04055 Radical SAM superfamily 8 177 1.6E-18 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS12515 f29559fb84b28b9af5350b1400468d23 378 Pfam PF06969 HemN C-terminal domain 302 366 6.5E-16 T 25-04-2017 IPR010723 HemN, C-terminal CLFO_RS12515 f29559fb84b28b9af5350b1400468d23 378 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 5 361 3.4E-102 T 25-04-2017 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 CLFO_RS12515 f29559fb84b28b9af5350b1400468d23 378 SMART SM00729 3 223 2.8E-49 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS12515 f29559fb84b28b9af5350b1400468d23 378 Gene3D G3DSA:3.80.30.20 4 239 4.3E-37 T 25-04-2017 IPR023404 Radical SAM, alpha/beta horseshoe CLFO_RS12515 f29559fb84b28b9af5350b1400468d23 378 SUPERFAMILY SSF102114 3 377 3.4E-110 T 25-04-2017 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 SUPERFAMILY SSF48452 818 1044 1.06E-17 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 SUPERFAMILY SSF52540 282 542 5.43E-14 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 SMART SM00267 1444 1614 2.3E-64 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 Gene3D G3DSA:1.25.40.10 845 1046 6.5E-17 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 Gene3D G3DSA:3.40.50.300 399 488 2.9E-7 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 Gene3D G3DSA:3.40.50.300 289 355 2.9E-7 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 SUPERFAMILY SSF56112 62 258 4.25E-19 T 25-04-2017 IPR011009 Protein kinase-like domain CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 SUPERFAMILY SSF48452 693 857 4.64E-15 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 Pfam PF13181 Tetratricopeptide repeat 902 933 0.12 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1456 1610 1.7E-48 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 SMART SM00220 8 261 1.5E-4 T 25-04-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 Gene3D G3DSA:1.10.510.10 60 256 5.7E-19 T 25-04-2017 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 Pfam PF00069 Protein kinase domain 61 251 2.9E-14 T 25-04-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1453 1613 3.8E-53 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 Gene3D G3DSA:1.25.40.10 718 844 1.2E-13 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 Pfam PF13191 AAA ATPase domain 285 450 4.7E-14 T 25-04-2017 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 Pfam PF13424 Tetratricopeptide repeat 742 811 2.8E-8 T 25-04-2017 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 SUPERFAMILY SSF55073 1460 1615 3.69E-47 T 25-04-2017 IPR029787 Nucleotide cyclase CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 SMART SM00028 941 974 4.2 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 SMART SM00028 740 773 0.012 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 SMART SM00028 900 934 24.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 SMART SM00028 780 813 0.76 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 SMART SM00028 1176 1209 13.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS07205 27d92f54457d83f5ab9c05684d888330 1797 Gene3D G3DSA:3.30.70.270 1457 1616 6.9E-52 T 25-04-2017 CLFO_RS19315 8c128a870bdd4a559381d402e6b317eb 218 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 12 217 1.6E-53 T 25-04-2017 IPR014205 Sporulation protein YtaF CLFO_RS19315 8c128a870bdd4a559381d402e6b317eb 218 Pfam PF02659 Putative manganese efflux pump 134 215 2.6E-10 T 25-04-2017 IPR003810 Putative manganese efflux pump CLFO_RS19315 8c128a870bdd4a559381d402e6b317eb 218 Pfam PF02659 Putative manganese efflux pump 11 86 2.6E-9 T 25-04-2017 IPR003810 Putative manganese efflux pump CLFO_RS06940 84f59012ebb1e63e81ed8c2fa4ef7b3d 154 SUPERFAMILY SSF48695 8 143 2.51E-6 T 25-04-2017 IPR011031 Multihaem cytochrome CLFO_RS06940 84f59012ebb1e63e81ed8c2fa4ef7b3d 154 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 24 140 3.6E-24 T 25-04-2017 IPR010181 CGCAxxGCC motif CLFO_RS06940 84f59012ebb1e63e81ed8c2fa4ef7b3d 154 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 24 142 3.1E-34 T 25-04-2017 IPR010181 CGCAxxGCC motif CLFO_RS17760 f3b9194f947c133a10fee0ba40cb45df 366 Pfam PF11202 Phosphoribosyl transferase (PRTase) 8 256 2.8E-111 T 25-04-2017 IPR011215 Phosphoribosyl transferase CLFO_RS17760 f3b9194f947c133a10fee0ba40cb45df 366 Pfam PF15608 PELOTA RNA binding domain 281 360 9.4E-35 T 25-04-2017 IPR028157 PELOTA RNA-binding domain CLFO_RS17760 f3b9194f947c133a10fee0ba40cb45df 366 PIRSF PIRSF020979 1 362 1.4E-89 T 25-04-2017 IPR011215 Phosphoribosyl transferase CLFO_RS08450 dd9b188007195a51e109094f26254fd8 192 SUPERFAMILY SSF52972 1 184 1.31E-60 T 25-04-2017 IPR029001 Inosine triphosphate pyrophosphatase-like CLFO_RS08450 dd9b188007195a51e109094f26254fd8 192 Gene3D G3DSA:3.90.950.10 2 185 9.3E-68 T 25-04-2017 IPR029001 Inosine triphosphate pyrophosphatase-like CLFO_RS08450 dd9b188007195a51e109094f26254fd8 192 Pfam PF02545 Maf-like protein 3 184 4.7E-60 T 25-04-2017 IPR003697 Maf-like protein GO:0005737 CLFO_RS08450 dd9b188007195a51e109094f26254fd8 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 181 2.1E-60 T 25-04-2017 IPR003697 Maf-like protein GO:0005737 CLFO_RS08450 dd9b188007195a51e109094f26254fd8 192 Hamap MF_00528 Septum formation protein Maf [maf]. 3 190 30.251 T 25-04-2017 IPR003697 Maf-like protein GO:0005737 CLFO_RS08450 dd9b188007195a51e109094f26254fd8 192 PIRSF PIRSF006305 1 190 2.3E-62 T 25-04-2017 IPR003697 Maf-like protein GO:0005737 CLFO_RS03690 1301e0e4da2ed99a3bc370bd528d6812 368 TIGRFAM TIGR00277 HDIG: HDIG domain 150 241 3.5E-7 T 25-04-2017 IPR006675 HDIG domain CLFO_RS03690 1301e0e4da2ed99a3bc370bd528d6812 368 SMART SM00471 146 282 5.1E-8 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS03690 1301e0e4da2ed99a3bc370bd528d6812 368 Gene3D G3DSA:1.10.3210.10 147 302 9.4E-23 T 25-04-2017 IPR006674 HD domain CLFO_RS03690 1301e0e4da2ed99a3bc370bd528d6812 368 SUPERFAMILY SSF109604 145 309 8.44E-30 T 25-04-2017 CLFO_RS03690 1301e0e4da2ed99a3bc370bd528d6812 368 Pfam PF01966 HD domain 151 272 5.7E-14 T 25-04-2017 IPR006674 HD domain CLFO_RS20350 e343b4f143758d3b3c51349a37597337 405 Gene3D G3DSA:3.30.70.20 18 62 1.7E-4 T 25-04-2017 CLFO_RS20350 e343b4f143758d3b3c51349a37597337 405 SUPERFAMILY SSF52402 70 265 6.91E-52 T 25-04-2017 CLFO_RS20350 e343b4f143758d3b3c51349a37597337 405 SMART SM00893 72 263 2.1E-40 T 25-04-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLFO_RS20350 e343b4f143758d3b3c51349a37597337 405 Gene3D G3DSA:3.40.50.1220 264 391 3.4E-48 T 25-04-2017 IPR029035 DHS-like NAD/FAD-binding domain CLFO_RS20350 e343b4f143758d3b3c51349a37597337 405 SUPERFAMILY SSF52467 271 390 6.14E-43 T 25-04-2017 IPR029035 DHS-like NAD/FAD-binding domain CLFO_RS20350 e343b4f143758d3b3c51349a37597337 405 SUPERFAMILY SSF54862 3 48 4.87E-5 T 25-04-2017 CLFO_RS20350 e343b4f143758d3b3c51349a37597337 405 Pfam PF01012 Electron transfer flavoprotein domain 74 249 4.3E-40 T 25-04-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLFO_RS20350 e343b4f143758d3b3c51349a37597337 405 Gene3D G3DSA:3.40.50.620 70 262 1.6E-70 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS20350 e343b4f143758d3b3c51349a37597337 405 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 271 353 4.5E-30 T 25-04-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CLFO_RS11985 aec862d54a9c179537bd1cd74a2c3dda 330 Pfam PF01867 CRISPR associated protein Cas1 6 284 1.5E-91 T 25-04-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CLFO_RS11985 aec862d54a9c179537bd1cd74a2c3dda 330 TIGRFAM TIGR03641 cas1_HMARI: CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP 4 330 7.8E-132 T 25-04-2017 IPR019858 CRISPR-associated protein Cas1, HMARI/TNEAP subtype GO:0004520|GO:0043571|GO:0046872 CLFO_RS11985 aec862d54a9c179537bd1cd74a2c3dda 330 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 315 25.531 T 25-04-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CLFO_RS11985 aec862d54a9c179537bd1cd74a2c3dda 330 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 4 324 2.3E-97 T 25-04-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CLFO_RS07785 dab1fe277215bd519baaaba58b3a4ad0 127 Gene3D G3DSA:1.10.260.40 3 65 8.5E-6 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS07785 dab1fe277215bd519baaaba58b3a4ad0 127 SUPERFAMILY SSF47413 4 63 3.58E-5 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS05210 fac06ef8a8fdea0f069e8622a4588704 200 Pfam PF00717 Peptidase S24-like 53 114 2.8E-11 T 25-04-2017 IPR019759 Peptidase S24/S26A/S26B CLFO_RS05210 fac06ef8a8fdea0f069e8622a4588704 200 Gene3D G3DSA:2.10.109.10 149 197 5.8E-33 T 25-04-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain CLFO_RS05210 fac06ef8a8fdea0f069e8622a4588704 200 Gene3D G3DSA:2.10.109.10 43 111 5.8E-33 T 25-04-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain CLFO_RS05210 fac06ef8a8fdea0f069e8622a4588704 200 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 46 62 7.1E-15 T 25-04-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLFO_RS05210 fac06ef8a8fdea0f069e8622a4588704 200 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 149 168 7.1E-15 T 25-04-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLFO_RS05210 fac06ef8a8fdea0f069e8622a4588704 200 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 101 113 7.1E-15 T 25-04-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLFO_RS05210 fac06ef8a8fdea0f069e8622a4588704 200 ProSitePatterns PS00501 Signal peptidases I serine active site. 55 62 - T 25-04-2017 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CLFO_RS05210 fac06ef8a8fdea0f069e8622a4588704 200 SUPERFAMILY SSF51306 45 195 5.34E-40 T 25-04-2017 IPR015927 Peptidase S24/S26A/S26B/S26C CLFO_RS05210 fac06ef8a8fdea0f069e8622a4588704 200 ProSitePatterns PS00761 Signal peptidases I signature 3. 154 167 - T 25-04-2017 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CLFO_RS05210 fac06ef8a8fdea0f069e8622a4588704 200 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 31 189 7.3E-38 T 25-04-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLFO_RS14575 23ce7205b63cc95269c1b687e8ee683b 255 Gene3D G3DSA:3.30.450.40 82 254 2.0E-63 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS14575 23ce7205b63cc95269c1b687e8ee683b 255 Gene3D G3DSA:1.10.10.10 9 81 2.6E-18 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS14575 23ce7205b63cc95269c1b687e8ee683b 255 SUPERFAMILY SSF46785 9 81 5.47E-13 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS14575 23ce7205b63cc95269c1b687e8ee683b 255 SUPERFAMILY SSF55781 73 254 1.18E-54 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS14575 23ce7205b63cc95269c1b687e8ee683b 255 Pfam PF01614 Bacterial transcriptional regulator 126 250 5.2E-42 T 25-04-2017 IPR014757 Transcription regulator IclR, C-terminal CLFO_RS14575 23ce7205b63cc95269c1b687e8ee683b 255 SMART SM00346 9 98 3.9E-26 T 25-04-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CLFO_RS14575 23ce7205b63cc95269c1b687e8ee683b 255 Pfam PF09339 IclR helix-turn-helix domain 11 61 2.0E-10 T 25-04-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CLFO_RS12400 feceabfa5fad6b52b2a91a7630aa11bd 295 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 165 5.5E-29 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS12400 feceabfa5fad6b52b2a91a7630aa11bd 295 TIGRFAM TIGR00436 era: GTP-binding protein Era 6 277 1.2E-95 T 25-04-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CLFO_RS12400 feceabfa5fad6b52b2a91a7630aa11bd 295 Pfam PF01926 50S ribosome-binding GTPase 8 122 7.8E-25 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS12400 feceabfa5fad6b52b2a91a7630aa11bd 295 Hamap MF_00367 GTPase Era [era]. 3 294 38.144 T 25-04-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CLFO_RS12400 feceabfa5fad6b52b2a91a7630aa11bd 295 SUPERFAMILY SSF52540 8 203 2.24E-50 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12400 feceabfa5fad6b52b2a91a7630aa11bd 295 Gene3D G3DSA:3.30.300.20 189 290 4.0E-42 T 25-04-2017 IPR015946 K homology domain-like, alpha/beta CLFO_RS12400 feceabfa5fad6b52b2a91a7630aa11bd 295 SUPERFAMILY SSF54814 179 295 5.36E-43 T 25-04-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 CLFO_RS12400 feceabfa5fad6b52b2a91a7630aa11bd 295 Pfam PF07650 KH domain 205 283 4.4E-21 T 25-04-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS12400 feceabfa5fad6b52b2a91a7630aa11bd 295 Gene3D G3DSA:3.40.50.300 6 188 3.1E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15805 cca0b38bc629bfd4a743c6d8624ae3f6 303 Gene3D G3DSA:3.40.50.720 1 82 1.4E-6 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15805 cca0b38bc629bfd4a743c6d8624ae3f6 303 Gene3D G3DSA:3.30.360.10 108 301 4.2E-19 T 25-04-2017 CLFO_RS15805 cca0b38bc629bfd4a743c6d8624ae3f6 303 SUPERFAMILY SSF51735 155 176 1.42E-12 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15805 cca0b38bc629bfd4a743c6d8624ae3f6 303 SUPERFAMILY SSF51735 1 126 1.42E-12 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15805 cca0b38bc629bfd4a743c6d8624ae3f6 303 SUPERFAMILY SSF55347 111 245 1.37E-14 T 25-04-2017 CLFO_RS06925 84e99387aab097ead2d90c9c86da3984 406 Gene3D G3DSA:1.20.1250.20 15 195 7.6E-30 T 25-04-2017 CLFO_RS06925 84e99387aab097ead2d90c9c86da3984 406 SUPERFAMILY SSF103473 10 387 3.27E-62 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS06925 84e99387aab097ead2d90c9c86da3984 406 Pfam PF07690 Major Facilitator Superfamily 21 352 8.4E-38 T 25-04-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLFO_RS06925 84e99387aab097ead2d90c9c86da3984 406 Gene3D G3DSA:1.20.1250.20 212 389 1.6E-13 T 25-04-2017 CLFO_RS15925 32d78251baa699d5b1cb792ce4930c8d 324 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15925 32d78251baa699d5b1cb792ce4930c8d 324 SMART SM00382 36 228 2.2E-16 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15925 32d78251baa699d5b1cb792ce4930c8d 324 SUPERFAMILY SSF52540 6 249 1.2E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15925 32d78251baa699d5b1cb792ce4930c8d 324 Pfam PF00005 ABC transporter 28 179 1.1E-30 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15925 32d78251baa699d5b1cb792ce4930c8d 324 Gene3D G3DSA:3.40.50.300 5 252 1.3E-72 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15925 32d78251baa699d5b1cb792ce4930c8d 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 293 1.4E-9 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS15925 32d78251baa699d5b1cb792ce4930c8d 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 228 312 4.0E-14 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS14755 10866b9851aea8d74b5245ef138a6907 635 SUPERFAMILY SSF52540 4 234 1.18E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14755 10866b9851aea8d74b5245ef138a6907 635 Gene3D G3DSA:3.40.50.300 310 525 1.0E-45 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14755 10866b9851aea8d74b5245ef138a6907 635 SUPERFAMILY SSF52540 305 520 1.16E-44 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14755 10866b9851aea8d74b5245ef138a6907 635 Gene3D G3DSA:3.40.50.300 5 278 4.5E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14755 10866b9851aea8d74b5245ef138a6907 635 Pfam PF12848 ABC transporter 220 292 2.1E-14 T 25-04-2017 IPR032781 ABC-transporter extension domain CLFO_RS14755 10866b9851aea8d74b5245ef138a6907 635 Pfam PF16326 ABC transporter C-terminal domain 557 622 4.1E-16 T 25-04-2017 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CLFO_RS14755 10866b9851aea8d74b5245ef138a6907 635 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS14755 10866b9851aea8d74b5245ef138a6907 635 Pfam PF00005 ABC transporter 19 181 4.4E-27 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS14755 10866b9851aea8d74b5245ef138a6907 635 Pfam PF00005 ABC transporter 329 463 2.0E-19 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS14755 10866b9851aea8d74b5245ef138a6907 635 SMART SM00382 337 512 3.5E-6 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS14755 10866b9851aea8d74b5245ef138a6907 635 SMART SM00382 28 226 8.3E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15370 e1991e1ee8f5a58bd2d89efea0ab09cf 87 Gene3D G3DSA:3.30.70.1290 9 77 1.3E-7 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS15370 e1991e1ee8f5a58bd2d89efea0ab09cf 87 SMART SM01321 9 87 6.1E-5 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS15370 e1991e1ee8f5a58bd2d89efea0ab09cf 87 Pfam PF01797 Transposase IS200 like 13 83 3.5E-10 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS15370 e1991e1ee8f5a58bd2d89efea0ab09cf 87 SUPERFAMILY SSF143422 1 84 7.72E-13 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS05160 31bfbea48466d0e097e8c44e216c6045 191 Pfam PF05067 Manganese containing catalase 1 185 2.5E-64 T 25-04-2017 IPR007760 Manganese catalase CLFO_RS05160 31bfbea48466d0e097e8c44e216c6045 191 Gene3D G3DSA:1.20.1260.10 1 184 5.5E-70 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS05160 31bfbea48466d0e097e8c44e216c6045 191 SUPERFAMILY SSF47240 1 189 5.55E-71 T 25-04-2017 IPR009078 Ferritin-like superfamily CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 SMART SM00387 349 455 5.4E-20 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 Pfam PF00672 HAMP domain 167 236 5.0E-11 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 SMART SM00388 240 306 1.7E-11 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 SUPERFAMILY SSF158472 187 235 4.32E-7 T 25-04-2017 CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 453 3.0E-14 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 Gene3D G3DSA:3.30.565.10 314 454 2.4E-26 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 304 1.4E-10 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 SMART SM00304 187 239 1.3E-6 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 Gene3D G3DSA:1.10.287.130 232 302 6.0E-11 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 SUPERFAMILY SSF55874 312 454 6.02E-28 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 6.5E-6 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 6.5E-6 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 6.5E-6 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS04120 7724a4bb4f9524906467171cd31e2b97 455 SUPERFAMILY SSF47384 225 304 2.16E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15890 b6a7f789587001ed3831cd55921f01ad 228 Gene3D G3DSA:3.40.50.150 16 192 2.2E-21 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS15890 b6a7f789587001ed3831cd55921f01ad 228 Pfam PF13847 Methyltransferase domain 42 147 3.1E-12 T 25-04-2017 IPR025714 Methyltransferase domain CLFO_RS15890 b6a7f789587001ed3831cd55921f01ad 228 SUPERFAMILY SSF53335 23 195 4.26E-21 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS12560 4a462a2fa96b947241bfcaa0d3021aff 241 SMART SM00448 2 116 1.7E-13 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS12560 4a462a2fa96b947241bfcaa0d3021aff 241 Gene3D G3DSA:3.40.50.2300 1 124 2.8E-20 T 25-04-2017 CLFO_RS12560 4a462a2fa96b947241bfcaa0d3021aff 241 Pfam PF04397 LytTr DNA-binding domain 141 235 8.0E-19 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS12560 4a462a2fa96b947241bfcaa0d3021aff 241 SMART SM00850 139 238 2.4E-26 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS12560 4a462a2fa96b947241bfcaa0d3021aff 241 Gene3D G3DSA:2.40.50.40 131 199 2.8E-18 T 25-04-2017 CLFO_RS12560 4a462a2fa96b947241bfcaa0d3021aff 241 SUPERFAMILY SSF52172 1 121 7.26E-21 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS12560 4a462a2fa96b947241bfcaa0d3021aff 241 Pfam PF00072 Response regulator receiver domain 4 114 8.7E-15 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS16560 8c8eb9ecf294859bdee6e2fbc7ca5fd5 100 Pfam PF00936 BMC domain 6 82 3.2E-24 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS16560 8c8eb9ecf294859bdee6e2fbc7ca5fd5 100 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 5 64 7.0E-25 T 25-04-2017 CLFO_RS16560 8c8eb9ecf294859bdee6e2fbc7ca5fd5 100 SMART SM00877 5 82 9.3E-32 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS16560 8c8eb9ecf294859bdee6e2fbc7ca5fd5 100 SUPERFAMILY SSF143414 4 93 2.75E-29 T 25-04-2017 CLFO_RS16550 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF53098 150 315 3.54E-8 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS16550 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:3.30.420.10 209 320 2.4E-4 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS16550 dde0e709438eabc17756ae8920ffe057 527 Pfam PF00665 Integrase core domain 149 275 1.6E-9 T 25-04-2017 IPR001584 Integrase, catalytic core GO:0015074 CLFO_RS16550 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:1.10.10.60 7 79 2.4E-4 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16550 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF46689 5 134 5.47E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS07595 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF53098 150 315 3.54E-8 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS07595 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:3.30.420.10 209 320 2.4E-4 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS07595 dde0e709438eabc17756ae8920ffe057 527 Pfam PF00665 Integrase core domain 149 275 1.6E-9 T 25-04-2017 IPR001584 Integrase, catalytic core GO:0015074 CLFO_RS07595 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:1.10.10.60 7 79 2.4E-4 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS07595 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF46689 5 134 5.47E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS20905 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF53098 150 315 3.54E-8 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS20905 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:3.30.420.10 209 320 2.4E-4 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS20905 dde0e709438eabc17756ae8920ffe057 527 Pfam PF00665 Integrase core domain 149 275 1.6E-9 T 25-04-2017 IPR001584 Integrase, catalytic core GO:0015074 CLFO_RS20905 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:1.10.10.60 7 79 2.4E-4 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS20905 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF46689 5 134 5.47E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16980 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF53098 150 315 3.54E-8 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS16980 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:3.30.420.10 209 320 2.4E-4 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS16980 dde0e709438eabc17756ae8920ffe057 527 Pfam PF00665 Integrase core domain 149 275 1.6E-9 T 25-04-2017 IPR001584 Integrase, catalytic core GO:0015074 CLFO_RS16980 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:1.10.10.60 7 79 2.4E-4 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16980 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF46689 5 134 5.47E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS12165 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF53098 150 315 3.54E-8 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS12165 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:3.30.420.10 209 320 2.4E-4 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS12165 dde0e709438eabc17756ae8920ffe057 527 Pfam PF00665 Integrase core domain 149 275 1.6E-9 T 25-04-2017 IPR001584 Integrase, catalytic core GO:0015074 CLFO_RS12165 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:1.10.10.60 7 79 2.4E-4 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS12165 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF46689 5 134 5.47E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS08710 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF53098 150 315 3.54E-8 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS08710 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:3.30.420.10 209 320 2.4E-4 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS08710 dde0e709438eabc17756ae8920ffe057 527 Pfam PF00665 Integrase core domain 149 275 1.6E-9 T 25-04-2017 IPR001584 Integrase, catalytic core GO:0015074 CLFO_RS08710 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:1.10.10.60 7 79 2.4E-4 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS08710 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF46689 5 134 5.47E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS04785 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF53098 150 315 3.54E-8 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS04785 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:3.30.420.10 209 320 2.4E-4 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS04785 dde0e709438eabc17756ae8920ffe057 527 Pfam PF00665 Integrase core domain 149 275 1.6E-9 T 25-04-2017 IPR001584 Integrase, catalytic core GO:0015074 CLFO_RS04785 dde0e709438eabc17756ae8920ffe057 527 Gene3D G3DSA:1.10.10.60 7 79 2.4E-4 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS04785 dde0e709438eabc17756ae8920ffe057 527 SUPERFAMILY SSF46689 5 134 5.47E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS00995 24312961bd9d4f288c64a6bd065cf23a 233 ProSitePatterns PS00449 ATP synthase a subunit signature. 158 167 - T 25-04-2017 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 CLFO_RS00995 24312961bd9d4f288c64a6bd065cf23a 233 PRINTS PR00123 ATP synthase A subunit signature 215 230 8.2E-14 T 25-04-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CLFO_RS00995 24312961bd9d4f288c64a6bd065cf23a 233 PRINTS PR00123 ATP synthase A subunit signature 139 154 8.2E-14 T 25-04-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CLFO_RS00995 24312961bd9d4f288c64a6bd065cf23a 233 PRINTS PR00123 ATP synthase A subunit signature 155 177 8.2E-14 T 25-04-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CLFO_RS00995 24312961bd9d4f288c64a6bd065cf23a 233 PRINTS PR00123 ATP synthase A subunit signature 80 96 8.2E-14 T 25-04-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CLFO_RS00995 24312961bd9d4f288c64a6bd065cf23a 233 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 233 13.401 T 25-04-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CLFO_RS00995 24312961bd9d4f288c64a6bd065cf23a 233 Gene3D G3DSA:1.20.120.220 72 232 3.7E-40 T 25-04-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CLFO_RS00995 24312961bd9d4f288c64a6bd065cf23a 233 Pfam PF00119 ATP synthase A chain 24 229 2.7E-54 T 25-04-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CLFO_RS00995 24312961bd9d4f288c64a6bd065cf23a 233 SUPERFAMILY SSF81336 72 229 8.37E-34 T 25-04-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CLFO_RS00995 24312961bd9d4f288c64a6bd065cf23a 233 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 24 230 4.2E-37 T 25-04-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 CLFO_RS03210 1c5d1cee4e1649988a8ea7b9de2c28b9 708 Pfam PF03063 Prismane/CO dehydrogenase family 124 688 1.6E-132 T 25-04-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS03210 1c5d1cee4e1649988a8ea7b9de2c28b9 708 SUPERFAMILY SSF56821 73 708 1.98E-176 T 25-04-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLFO_RS03210 1c5d1cee4e1649988a8ea7b9de2c28b9 708 Gene3D G3DSA:3.40.50.2030 315 492 3.7E-51 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS03210 1c5d1cee4e1649988a8ea7b9de2c28b9 708 Gene3D G3DSA:1.20.1270.30 137 313 3.9E-51 T 25-04-2017 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS03210 1c5d1cee4e1649988a8ea7b9de2c28b9 708 Gene3D G3DSA:3.40.50.2030 493 708 1.5E-71 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS03210 1c5d1cee4e1649988a8ea7b9de2c28b9 708 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 86 708 2.1E-206 T 25-04-2017 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS04540 3e6061e919d59c4a1ddc17231abca376 117 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 4 117 7.9E-50 T 25-04-2017 IPR014204 Sporulation stage V, protein AE CLFO_RS04540 3e6061e919d59c4a1ddc17231abca376 117 Pfam PF03862 SpoVA protein 4 112 1.2E-38 T 25-04-2017 IPR005562 SpoVA CLFO_RS04125 c5b68648d3f02430fe288955807108f8 325 Gene3D G3DSA:1.10.287.70 57 152 1.1E-14 T 25-04-2017 CLFO_RS04125 c5b68648d3f02430fe288955807108f8 325 SUPERFAMILY SSF81324 48 157 4.84E-20 T 25-04-2017 CLFO_RS04125 c5b68648d3f02430fe288955807108f8 325 SUPERFAMILY SSF81324 287 319 4.84E-20 T 25-04-2017 CLFO_RS04125 c5b68648d3f02430fe288955807108f8 325 Pfam PF07885 Ion channel 67 153 1.4E-13 T 25-04-2017 IPR013099 Potassium channel domain CLFO_RS07115 b7a92e2caa31fec0a34db38fe2ff6f94 591 Gene3D G3DSA:3.40.50.300 148 333 7.3E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07115 b7a92e2caa31fec0a34db38fe2ff6f94 591 Gene3D G3DSA:1.10.8.60 334 399 3.4E-20 T 25-04-2017 CLFO_RS07115 b7a92e2caa31fec0a34db38fe2ff6f94 591 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 25-04-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CLFO_RS07115 b7a92e2caa31fec0a34db38fe2ff6f94 591 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 7 587 30.294 T 25-04-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLFO_RS07115 b7a92e2caa31fec0a34db38fe2ff6f94 591 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 109 585 9.8E-161 T 25-04-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLFO_RS07115 b7a92e2caa31fec0a34db38fe2ff6f94 591 Pfam PF01434 Peptidase family M41 386 584 8.0E-46 T 25-04-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CLFO_RS07115 b7a92e2caa31fec0a34db38fe2ff6f94 591 SUPERFAMILY SSF140990 409 589 4.32E-50 T 25-04-2017 CLFO_RS07115 b7a92e2caa31fec0a34db38fe2ff6f94 591 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 1.3E-42 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS07115 b7a92e2caa31fec0a34db38fe2ff6f94 591 Pfam PF06480 FtsH Extracellular 16 82 1.7E-6 T 25-04-2017 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 CLFO_RS07115 b7a92e2caa31fec0a34db38fe2ff6f94 591 SUPERFAMILY SSF52540 148 393 9.32E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07115 b7a92e2caa31fec0a34db38fe2ff6f94 591 SMART SM00382 188 327 1.2E-23 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS02605 5c6188037ff43976a5a0a64c2a3fc3dc 475 PIRSF PIRSF002746 5 475 3.1E-143 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS02605 5c6188037ff43976a5a0a64c2a3fc3dc 475 Pfam PF02447 GntP family permease 11 216 9.5E-68 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS02605 5c6188037ff43976a5a0a64c2a3fc3dc 475 Pfam PF02447 GntP family permease 248 472 1.3E-60 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS02605 5c6188037ff43976a5a0a64c2a3fc3dc 475 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 11 473 1.1E-98 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 225 377 1.1E-28 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 Pfam PF12631 MnmE helical domain 130 458 4.3E-59 T 25-04-2017 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 461 34.925 T 25-04-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 SUPERFAMILY SSF52540 204 378 6.9E-42 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 SUPERFAMILY SSF52540 82 170 6.9E-42 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 Gene3D G3DSA:3.40.50.300 225 254 4.1E-6 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 PRINTS PR00449 Transforming protein P21 ras signature 328 341 4.4E-5 T 25-04-2017 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 PRINTS PR00449 Transforming protein P21 ras signature 224 245 4.4E-5 T 25-04-2017 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 PRINTS PR00449 Transforming protein P21 ras signature 264 286 4.4E-5 T 25-04-2017 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 SUPERFAMILY SSF116878 128 227 4.97E-50 T 25-04-2017 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 SUPERFAMILY SSF116878 386 461 4.97E-50 T 25-04-2017 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 Pfam PF01926 50S ribosome-binding GTPase 226 338 1.9E-25 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 Gene3D G3DSA:3.30.1360.120 3 128 3.4E-43 T 25-04-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 127 1.2E-38 T 25-04-2017 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 Gene3D G3DSA:3.40.50.300 297 391 6.2E-13 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 461 6.1E-135 T 25-04-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 Gene3D G3DSA:1.20.120.430 255 278 5.4E-55 T 25-04-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 Gene3D G3DSA:1.20.120.430 392 461 5.4E-55 T 25-04-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 CLFO_RS21415 2aa60e904a16b64ce6a3ddfa86b1814b 461 Gene3D G3DSA:1.20.120.430 129 189 5.4E-55 T 25-04-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 CLFO_RS20095 ad3466679ad77f9cbbbd3a5f8ea8438d 349 SUPERFAMILY SSF56059 125 342 3.89E-63 T 25-04-2017 CLFO_RS20095 ad3466679ad77f9cbbbd3a5f8ea8438d 349 SUPERFAMILY SSF52440 3 124 1.06E-38 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS20095 ad3466679ad77f9cbbbd3a5f8ea8438d 349 Gene3D G3DSA:3.30.1490.20 152 211 2.1E-25 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS20095 ad3466679ad77f9cbbbd3a5f8ea8438d 349 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 339 43.812 T 25-04-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS20095 ad3466679ad77f9cbbbd3a5f8ea8438d 349 Pfam PF01820 D-ala D-ala ligase N-terminus 5 115 1.6E-34 T 25-04-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS20095 ad3466679ad77f9cbbbd3a5f8ea8438d 349 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 92 103 - T 25-04-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS20095 ad3466679ad77f9cbbbd3a5f8ea8438d 349 Gene3D G3DSA:3.30.470.20 212 344 6.7E-54 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS20095 ad3466679ad77f9cbbbd3a5f8ea8438d 349 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 338 2.4E-117 T 25-04-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS20095 ad3466679ad77f9cbbbd3a5f8ea8438d 349 PIRSF PIRSF039102 1 347 1.4E-125 T 25-04-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS20095 ad3466679ad77f9cbbbd3a5f8ea8438d 349 Pfam PF07478 D-ala D-ala ligase C-terminus 135 335 2.6E-81 T 25-04-2017 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS20095 ad3466679ad77f9cbbbd3a5f8ea8438d 349 Gene3D G3DSA:3.40.50.20 1 114 4.3E-37 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS20095 ad3466679ad77f9cbbbd3a5f8ea8438d 349 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 280 309 - T 25-04-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS00320 5b0b49edea6c2fcdfa2d065bcfdd5f37 371 PIRSF PIRSF026782 8 366 2.6E-132 T 25-04-2017 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CLFO_RS00320 5b0b49edea6c2fcdfa2d065bcfdd5f37 371 SUPERFAMILY SSF111342 3 286 6.41E-89 T 25-04-2017 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CLFO_RS00320 5b0b49edea6c2fcdfa2d065bcfdd5f37 371 Gene3D G3DSA:3.30.2110.10 15 183 1.1E-59 T 25-04-2017 CLFO_RS00320 5b0b49edea6c2fcdfa2d065bcfdd5f37 371 Pfam PF01888 CbiD 12 268 6.3E-103 T 25-04-2017 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CLFO_RS00320 5b0b49edea6c2fcdfa2d065bcfdd5f37 371 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 12 359 30.718 T 25-04-2017 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CLFO_RS00320 5b0b49edea6c2fcdfa2d065bcfdd5f37 371 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 19 363 3.4E-94 T 25-04-2017 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CLFO_RS19685 79ac826836b4fb177a0b99f61a660249 93 SUPERFAMILY SSF54570 3 84 1.03E-35 T 25-04-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19685 79ac826836b4fb177a0b99f61a660249 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 25-04-2017 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19685 79ac826836b4fb177a0b99f61a660249 93 Pfam PF00203 Ribosomal protein S19 3 83 1.5E-37 T 25-04-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19685 79ac826836b4fb177a0b99f61a660249 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.604 T 25-04-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19685 79ac826836b4fb177a0b99f61a660249 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.8E-24 T 25-04-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19685 79ac826836b4fb177a0b99f61a660249 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.8E-24 T 25-04-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19685 79ac826836b4fb177a0b99f61a660249 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.8E-24 T 25-04-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19685 79ac826836b4fb177a0b99f61a660249 93 Gene3D G3DSA:3.30.860.10 1 92 5.2E-41 T 25-04-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19685 79ac826836b4fb177a0b99f61a660249 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 5.4E-46 T 25-04-2017 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CLFO_RS19685 79ac826836b4fb177a0b99f61a660249 93 PIRSF PIRSF002144 1 93 2.5E-33 T 25-04-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS16470 7e9dc96a5b75b66ee5a27ef2459afd0a 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 271 2.6E-30 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS16470 7e9dc96a5b75b66ee5a27ef2459afd0a 302 SUPERFAMILY SSF161098 68 255 1.7E-25 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS16470 7e9dc96a5b75b66ee5a27ef2459afd0a 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 3 44 1.2E-9 T 25-04-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLFO_RS16470 7e9dc96a5b75b66ee5a27ef2459afd0a 302 Gene3D G3DSA:1.10.3720.10 67 271 2.5E-24 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15145 57f1e3a349066062b047afb134f39ba3 237 Pfam PF04405 Domain of Unknown function (DUF542) 8 61 2.4E-21 T 25-04-2017 IPR019903 Repair of iron centres family CLFO_RS15145 57f1e3a349066062b047afb134f39ba3 237 Pfam PF01814 Hemerythrin HHE cation binding domain 85 232 4.3E-20 T 25-04-2017 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 CLFO_RS15145 57f1e3a349066062b047afb134f39ba3 237 SUPERFAMILY SSF140683 4 64 6.28E-5 T 25-04-2017 CLFO_RS15145 57f1e3a349066062b047afb134f39ba3 237 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 11 231 8.2E-73 T 25-04-2017 IPR019903 Repair of iron centres family CLFO_RS15145 57f1e3a349066062b047afb134f39ba3 237 Gene3D G3DSA:1.20.120.520 74 233 3.6E-25 T 25-04-2017 CLFO_RS06090 a818aa315c6a96fea115635f56eb6e0f 230 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 7 214 1.2E-32 T 25-04-2017 IPR010178 Integral membrane protein 1906 CLFO_RS06090 a818aa315c6a96fea115635f56eb6e0f 230 Pfam PF07314 Protein of unknown function (DUF1461) 12 195 7.9E-50 T 25-04-2017 IPR010178 Integral membrane protein 1906 CLFO_RS15870 ceaf92a8a262e1fbd8d99fd4883a279a 277 Gene3D G3DSA:1.10.3720.10 66 270 1.5E-26 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15870 ceaf92a8a262e1fbd8d99fd4883a279a 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 271 1.2E-31 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15870 ceaf92a8a262e1fbd8d99fd4883a279a 277 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 6 49 1.3E-8 T 25-04-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLFO_RS15870 ceaf92a8a262e1fbd8d99fd4883a279a 277 SUPERFAMILY SSF161098 67 255 4.32E-26 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12260 4e832c382e4020f64afbe48b89d9b44b 339 SUPERFAMILY SSF109604 18 214 1.13E-69 T 25-04-2017 CLFO_RS12260 4e832c382e4020f64afbe48b89d9b44b 339 SUPERFAMILY SSF109604 243 335 1.13E-69 T 25-04-2017 CLFO_RS12260 4e832c382e4020f64afbe48b89d9b44b 339 Gene3D G3DSA:1.10.3210.10 36 332 9.5E-70 T 25-04-2017 IPR006674 HD domain CLFO_RS12260 4e832c382e4020f64afbe48b89d9b44b 339 Pfam PF13286 Phosphohydrolase-associated domain 247 329 4.1E-13 T 25-04-2017 IPR026875 Phosphohydrolase-associated domain CLFO_RS12260 4e832c382e4020f64afbe48b89d9b44b 339 SMART SM00471 72 195 1.4E-12 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS12260 4e832c382e4020f64afbe48b89d9b44b 339 Pfam PF01966 HD domain 76 184 2.0E-16 T 25-04-2017 IPR006674 HD domain CLFO_RS01750 db56a5da1b1707c98495472eb4bb440c 358 Gene3D G3DSA:3.40.50.720 185 305 7.3E-33 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01750 db56a5da1b1707c98495472eb4bb440c 358 SUPERFAMILY SSF50129 7 191 3.35E-47 T 25-04-2017 IPR011032 GroES-like CLFO_RS01750 db56a5da1b1707c98495472eb4bb440c 358 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 149 4.7E-30 T 25-04-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLFO_RS01750 db56a5da1b1707c98495472eb4bb440c 358 Pfam PF00107 Zinc-binding dehydrogenase 193 318 8.1E-23 T 25-04-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLFO_RS01750 db56a5da1b1707c98495472eb4bb440c 358 SMART SM00829 15 356 6.4E-4 T 25-04-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CLFO_RS01750 db56a5da1b1707c98495472eb4bb440c 358 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 25-04-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CLFO_RS01750 db56a5da1b1707c98495472eb4bb440c 358 SUPERFAMILY SSF51735 159 315 7.9E-36 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01750 db56a5da1b1707c98495472eb4bb440c 358 Gene3D G3DSA:3.90.180.10 5 184 1.5E-49 T 25-04-2017 IPR011032 GroES-like CLFO_RS14365 dfd7f4c2890369a06708d727dd30d094 283 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 281 6.2E-91 T 25-04-2017 IPR003797 DegV CLFO_RS14365 dfd7f4c2890369a06708d727dd30d094 283 SUPERFAMILY SSF82549 3 282 2.88E-86 T 25-04-2017 CLFO_RS14365 dfd7f4c2890369a06708d727dd30d094 283 Gene3D G3DSA:3.30.1180.10 156 282 1.9E-42 T 25-04-2017 CLFO_RS14365 dfd7f4c2890369a06708d727dd30d094 283 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 281 2.9E-99 T 25-04-2017 IPR003797 DegV CLFO_RS14365 dfd7f4c2890369a06708d727dd30d094 283 Gene3D G3DSA:3.40.50.10170 3 154 7.3E-46 T 25-04-2017 CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 543 706 5.8E-38 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 Gene3D G3DSA:3.30.450.20 406 542 5.9E-16 T 25-04-2017 CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 SUPERFAMILY SSF103190 191 294 1.33E-9 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 Gene3D G3DSA:3.30.70.270 549 714 5.8E-50 T 25-04-2017 CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 Gene3D G3DSA:3.30.450.20 197 294 1.5E-5 T 25-04-2017 CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 Gene3D G3DSA:3.20.20.450 720 966 1.4E-85 T 25-04-2017 IPR001633 EAL domain CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 Pfam PF00563 EAL domain 723 954 7.6E-65 T 25-04-2017 IPR001633 EAL domain CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 SUPERFAMILY SSF55785 428 538 1.8E-11 T 25-04-2017 IPR000014 PAS domain CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 SMART SM00267 536 707 2.7E-53 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 SMART SM00052 717 959 9.2E-97 T 25-04-2017 IPR001633 EAL domain CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 Pfam PF00990 Diguanylate cyclase, GGDEF domain 547 703 6.1E-43 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 SUPERFAMILY SSF141868 722 967 1.15E-77 T 25-04-2017 IPR001633 EAL domain CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 424 540 3.0E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 SUPERFAMILY SSF55073 552 709 7.38E-44 T 25-04-2017 IPR029787 Nucleotide cyclase CLFO_RS02760 77bdeca044d55dd7103e50cbaa30489e 975 Pfam PF08447 PAS fold 442 529 5.9E-7 T 25-04-2017 IPR013655 PAS fold-3 GO:0005515 CLFO_RS04315 51195892378d52a2a2fdcf63b546a057 363 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 7 69 1.9E-7 T 25-04-2017 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLFO_RS04315 51195892378d52a2a2fdcf63b546a057 363 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 162 352 3.3E-8 T 25-04-2017 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLFO_RS17605 47a7de2188bba98ff43ba19fd1a8d875 134 SUPERFAMILY SSF50800 54 133 1.05E-10 T 25-04-2017 IPR011037 Pyruvate kinase-like, insert domain CLFO_RS17605 47a7de2188bba98ff43ba19fd1a8d875 134 Gene3D G3DSA:2.40.33.20 58 133 4.3E-5 T 25-04-2017 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like CLFO_RS03980 97286b4a079284a0519498fc3394ed89 202 Gene3D G3DSA:1.10.1660.10 2 54 2.4E-14 T 25-04-2017 CLFO_RS03980 97286b4a079284a0519498fc3394ed89 202 SUPERFAMILY SSF53041 59 194 4.84E-23 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS03980 97286b4a079284a0519498fc3394ed89 202 Pfam PF13411 MerR HTH family regulatory protein 4 53 1.8E-11 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS03980 97286b4a079284a0519498fc3394ed89 202 ProSitePatterns PS00397 Site-specific recombinases active site. 64 72 - T 25-04-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CLFO_RS03980 97286b4a079284a0519498fc3394ed89 202 SMART SM00857 61 194 1.5E-16 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS03980 97286b4a079284a0519498fc3394ed89 202 Gene3D G3DSA:3.40.50.1390 60 177 1.7E-20 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS03980 97286b4a079284a0519498fc3394ed89 202 SUPERFAMILY SSF46955 2 61 6.41E-13 T 25-04-2017 IPR009061 Putative DNA-binding domain CLFO_RS03980 97286b4a079284a0519498fc3394ed89 202 Pfam PF00239 Resolvase, N terminal domain 61 193 1.3E-18 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS09255 540ad8ab3a5c20c8020134a423c3c177 361 SUPERFAMILY SSF52402 1 250 5.07E-61 T 25-04-2017 CLFO_RS09255 540ad8ab3a5c20c8020134a423c3c177 361 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 5 358 40.271 T 25-04-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CLFO_RS09255 540ad8ab3a5c20c8020134a423c3c177 361 Pfam PF03054 tRNA methyl transferase 6 357 9.8E-122 T 25-04-2017 CLFO_RS09255 540ad8ab3a5c20c8020134a423c3c177 361 Gene3D G3DSA:3.40.50.620 2 215 6.2E-87 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS09255 540ad8ab3a5c20c8020134a423c3c177 361 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 357 3.0E-108 T 25-04-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CLFO_RS09255 540ad8ab3a5c20c8020134a423c3c177 361 Gene3D G3DSA:2.30.30.280 225 277 1.1E-15 T 25-04-2017 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 CLFO_RS09255 540ad8ab3a5c20c8020134a423c3c177 361 Gene3D G3DSA:2.40.30.10 283 359 3.1E-24 T 25-04-2017 CLFO_RS07900 a0c3326b4bd5abde8eb869c29b04ff8f 330 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 25-04-2017 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CLFO_RS07900 a0c3326b4bd5abde8eb869c29b04ff8f 330 PIRSF PIRSF001220 1 329 2.6E-92 T 25-04-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CLFO_RS07900 a0c3326b4bd5abde8eb869c29b04ff8f 330 Pfam PF00710 Asparaginase, N-terminal 5 194 1.9E-52 T 25-04-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CLFO_RS07900 a0c3326b4bd5abde8eb869c29b04ff8f 330 Gene3D G3DSA:3.40.50.1170 2 211 2.6E-58 T 25-04-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CLFO_RS07900 a0c3326b4bd5abde8eb869c29b04ff8f 330 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 25-04-2017 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CLFO_RS07900 a0c3326b4bd5abde8eb869c29b04ff8f 330 SUPERFAMILY SSF53774 2 327 2.22E-100 T 25-04-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CLFO_RS07900 a0c3326b4bd5abde8eb869c29b04ff8f 330 SMART SM00870 5 321 8.5E-136 T 25-04-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CLFO_RS07900 a0c3326b4bd5abde8eb869c29b04ff8f 330 PIRSF PIRSF500176 2 329 2.6E-84 T 25-04-2017 CLFO_RS07900 a0c3326b4bd5abde8eb869c29b04ff8f 330 PRINTS PR00139 Asparaginase/glutaminase family signature 256 274 6.3E-16 T 25-04-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CLFO_RS07900 a0c3326b4bd5abde8eb869c29b04ff8f 330 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 6.3E-16 T 25-04-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CLFO_RS07900 a0c3326b4bd5abde8eb869c29b04ff8f 330 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 6.3E-16 T 25-04-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 CLFO_RS07900 a0c3326b4bd5abde8eb869c29b04ff8f 330 Gene3D G3DSA:3.40.50.40 212 325 6.9E-36 T 25-04-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CLFO_RS06995 b752bf2960e229f1215e4500e19d824c 454 SUPERFAMILY SSF53807 3 453 1.11E-152 T 25-04-2017 CLFO_RS06995 b752bf2960e229f1215e4500e19d824c 454 Gene3D G3DSA:3.40.50.1980 23 159 1.5E-48 T 25-04-2017 CLFO_RS06995 b752bf2960e229f1215e4500e19d824c 454 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 10 445 6.6E-142 T 25-04-2017 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CLFO_RS06995 b752bf2960e229f1215e4500e19d824c 454 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 41 48 - T 25-04-2017 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CLFO_RS06995 b752bf2960e229f1215e4500e19d824c 454 Gene3D G3DSA:3.40.50.1980 164 265 2.5E-37 T 25-04-2017 CLFO_RS06995 b752bf2960e229f1215e4500e19d824c 454 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 23 437 7.2E-128 T 25-04-2017 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CLFO_RS06995 b752bf2960e229f1215e4500e19d824c 454 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 104 118 - T 25-04-2017 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CLFO_RS06995 b752bf2960e229f1215e4500e19d824c 454 Gene3D G3DSA:3.40.50.1980 290 412 2.8E-51 T 25-04-2017 CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 Pfam PF00158 Sigma-54 interaction domain 322 489 3.0E-71 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 SMART SM00382 342 487 2.8E-13 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 Pfam PF01590 GAF domain 95 179 1.0E-4 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 SMART SM00091 195 262 2.2E-5 T 25-04-2017 IPR000014 PAS domain CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 Pfam PF13426 PAS domain 207 300 6.9E-7 T 25-04-2017 IPR000014 PAS domain CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 Gene3D G3DSA:3.40.50.300 318 495 7.0E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 Gene3D G3DSA:1.10.10.60 573 623 2.5E-20 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 SUPERFAMILY SSF55781 41 182 1.77E-6 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 Gene3D G3DSA:3.30.450.40 136 183 5.1E-4 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 197 308 1.4E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 Pfam PF02954 Bacterial regulatory protein, Fis family 580 620 1.5E-17 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 SUPERFAMILY SSF55785 184 298 2.62E-13 T 25-04-2017 IPR000014 PAS domain CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 Gene3D G3DSA:3.30.450.20 190 300 7.7E-14 T 25-04-2017 CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 603 623 2.1E-10 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 586 603 2.1E-10 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 409 424 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 SUPERFAMILY SSF46689 536 623 1.01E-16 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 Gene3D G3DSA:1.10.8.60 496 555 7.0E-18 T 25-04-2017 CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 346 359 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS20315 7814bdd0425fef0f461bdd7b2ca09038 629 SUPERFAMILY SSF52540 322 557 1.38E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15815 881901e8e9276ede1c6fdb630cce2b9c 207 Gene3D G3DSA:3.40.50.20 2 79 7.7E-16 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS15815 881901e8e9276ede1c6fdb630cce2b9c 207 Gene3D G3DSA:2.160.10.10 90 207 4.2E-22 T 25-04-2017 CLFO_RS15815 881901e8e9276ede1c6fdb630cce2b9c 207 SUPERFAMILY SSF51161 4 207 8.46E-28 T 25-04-2017 IPR011004 Trimeric LpxA-like CLFO_RS15815 881901e8e9276ede1c6fdb630cce2b9c 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 158 193 3.7E-4 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS18625 259c40e83c8cb297983701cc9257e840 552 Pfam PF00920 Dehydratase family 31 548 5.5E-210 T 25-04-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS18625 259c40e83c8cb297983701cc9257e840 552 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 551 43.906 T 25-04-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS18625 259c40e83c8cb297983701cc9257e840 552 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 15 551 1.6E-219 T 25-04-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS18625 259c40e83c8cb297983701cc9257e840 552 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 25-04-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS18625 259c40e83c8cb297983701cc9257e840 552 SUPERFAMILY SSF52016 370 550 7.69E-61 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS18625 259c40e83c8cb297983701cc9257e840 552 SUPERFAMILY SSF143975 1 369 4.45E-130 T 25-04-2017 CLFO_RS18625 259c40e83c8cb297983701cc9257e840 552 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 458 469 - T 25-04-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS09790 512e118c373090a80f84736519d09e7a 294 Pfam PF11382 Copper transport outer membrane protein, MctB 4 289 2.0E-38 T 25-04-2017 IPR021522 Copper transporter MctB GO:0006810 CLFO_RS05145 c6bf88524595b139cb1f61ba3be0a61a 509 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 4 217 7.1E-41 T 25-04-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLFO_RS05145 c6bf88524595b139cb1f61ba3be0a61a 509 Pfam PF01256 Carbohydrate kinase 255 500 5.1E-62 T 25-04-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CLFO_RS05145 c6bf88524595b139cb1f61ba3be0a61a 509 Pfam PF03853 YjeF-related protein N-terminus 26 195 2.8E-43 T 25-04-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLFO_RS05145 c6bf88524595b139cb1f61ba3be0a61a 509 PIRSF PIRSF017184 1 509 4.1E-152 T 25-04-2017 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CLFO_RS05145 c6bf88524595b139cb1f61ba3be0a61a 509 SUPERFAMILY SSF53613 228 506 2.25E-75 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS05145 c6bf88524595b139cb1f61ba3be0a61a 509 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 231 503 1.3E-71 T 25-04-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CLFO_RS05145 c6bf88524595b139cb1f61ba3be0a61a 509 Gene3D G3DSA:3.40.1190.20 238 506 4.4E-90 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS05145 c6bf88524595b139cb1f61ba3be0a61a 509 SUPERFAMILY SSF64153 1 253 2.09E-57 T 25-04-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLFO_RS05145 c6bf88524595b139cb1f61ba3be0a61a 509 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 443 453 - T 25-04-2017 IPR017953 Carbohydrate kinase, predicted, conserved site CLFO_RS05145 c6bf88524595b139cb1f61ba3be0a61a 509 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 231 508 23.989 T 25-04-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CLFO_RS05145 c6bf88524595b139cb1f61ba3be0a61a 509 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 216 25.613 T 25-04-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLFO_RS05145 c6bf88524595b139cb1f61ba3be0a61a 509 Gene3D G3DSA:3.40.50.10260 1 237 1.7E-65 T 25-04-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CLFO_RS05515 7cbb20cf53d86cf4757d93a1b8f786f2 214 Pfam PF02080 TrkA-C domain 150 213 5.1E-13 T 25-04-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLFO_RS05515 7cbb20cf53d86cf4757d93a1b8f786f2 214 SUPERFAMILY SSF51735 2 133 2.54E-38 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS05515 7cbb20cf53d86cf4757d93a1b8f786f2 214 SUPERFAMILY SSF116726 130 213 1.7E-19 T 25-04-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLFO_RS05515 7cbb20cf53d86cf4757d93a1b8f786f2 214 Pfam PF02254 TrkA-N domain 4 119 5.6E-33 T 25-04-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CLFO_RS05515 7cbb20cf53d86cf4757d93a1b8f786f2 214 Gene3D G3DSA:3.40.50.720 2 138 1.8E-40 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS05515 7cbb20cf53d86cf4757d93a1b8f786f2 214 Gene3D G3DSA:3.30.70.1450 150 214 1.4E-17 T 25-04-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLFO_RS09830 ed4e90ce2be9a85df8a0fea4b218fe64 272 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 23 270 8.7E-112 T 25-04-2017 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CLFO_RS09830 ed4e90ce2be9a85df8a0fea4b218fe64 272 Pfam PF01048 Phosphorylase superfamily 23 270 5.6E-56 T 25-04-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLFO_RS09830 ed4e90ce2be9a85df8a0fea4b218fe64 272 SUPERFAMILY SSF53167 3 272 4.71E-98 T 25-04-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLFO_RS09830 ed4e90ce2be9a85df8a0fea4b218fe64 272 Gene3D G3DSA:3.40.50.1580 4 271 7.5E-110 T 25-04-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLFO_RS09830 ed4e90ce2be9a85df8a0fea4b218fe64 272 PIRSF PIRSF000477 1 272 3.6E-116 T 25-04-2017 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CLFO_RS09830 ed4e90ce2be9a85df8a0fea4b218fe64 272 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 23 269 5.4E-114 T 25-04-2017 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CLFO_RS07830 59609286e8b173ab08e4e88dcfe19484 145 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 144 24.993 T 25-04-2017 IPR003791 Protein of unknown function UPF0178 CLFO_RS07830 59609286e8b173ab08e4e88dcfe19484 145 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 15 141 2.1E-37 T 25-04-2017 IPR003791 Protein of unknown function UPF0178 CLFO_RS01235 f4ce25d7d0fa6ed5f30688a06dcdae86 127 SUPERFAMILY SSF55486 6 106 1.98E-17 T 25-04-2017 CLFO_RS01235 f4ce25d7d0fa6ed5f30688a06dcdae86 127 Gene3D G3DSA:3.40.390.10 13 120 4.0E-4 T 25-04-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CLFO_RS01235 f4ce25d7d0fa6ed5f30688a06dcdae86 127 Pfam PF06262 Zinicin-like metallopeptidase 60 101 5.9E-6 T 25-04-2017 IPR010428 Zinicin-like metallopeptidase CLFO_RS08485 19c1f75a2cf250b17f0eca6b3fe8790d 265 SUPERFAMILY SSF52540 1 247 2.83E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08485 19c1f75a2cf250b17f0eca6b3fe8790d 265 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 209 1.3E-33 T 25-04-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLFO_RS08485 19c1f75a2cf250b17f0eca6b3fe8790d 265 PIRSF PIRSF003092 1 265 3.6E-91 T 25-04-2017 IPR025501 ATP binding protein MinD CLFO_RS08485 19c1f75a2cf250b17f0eca6b3fe8790d 265 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 261 2.8E-124 T 25-04-2017 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 CLFO_RS08485 19c1f75a2cf250b17f0eca6b3fe8790d 265 Gene3D G3DSA:3.40.50.300 1 238 1.6E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04400 82fbb591d097a137ee2d1de69c2c4cd8 278 SUPERFAMILY SSF53681 11 112 1.96E-31 T 25-04-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS04400 82fbb591d097a137ee2d1de69c2c4cd8 278 Hamap MF_00258 Glutamate racemase [murI]. 10 263 32.509 T 25-04-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS04400 82fbb591d097a137ee2d1de69c2c4cd8 278 Gene3D G3DSA:3.40.50.1860 9 177 9.1E-49 T 25-04-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS04400 82fbb591d097a137ee2d1de69c2c4cd8 278 SUPERFAMILY SSF53681 115 265 2.18E-25 T 25-04-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS04400 82fbb591d097a137ee2d1de69c2c4cd8 278 Pfam PF01177 Asp/Glu/Hydantoin racemase 12 219 1.2E-28 T 25-04-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS04400 82fbb591d097a137ee2d1de69c2c4cd8 278 TIGRFAM TIGR00067 glut_race: glutamate racemase 12 257 1.9E-69 T 25-04-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS04400 82fbb591d097a137ee2d1de69c2c4cd8 278 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 76 84 - T 25-04-2017 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS11275 45aa4a70854d50a25e89b68321871be2 313 SUPERFAMILY SSF55048 129 196 3.27E-15 T 25-04-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CLFO_RS11275 45aa4a70854d50a25e89b68321871be2 313 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 291 2.3E-21 T 25-04-2017 IPR020801 Polyketide synthase, acyl transferase domain CLFO_RS11275 45aa4a70854d50a25e89b68321871be2 313 Pfam PF00698 Acyl transferase domain 6 290 2.2E-27 T 25-04-2017 IPR014043 Acyl transferase CLFO_RS11275 45aa4a70854d50a25e89b68321871be2 313 Gene3D G3DSA:3.40.366.10 2 121 3.8E-62 T 25-04-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CLFO_RS11275 45aa4a70854d50a25e89b68321871be2 313 Gene3D G3DSA:3.40.366.10 196 295 3.8E-62 T 25-04-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CLFO_RS11275 45aa4a70854d50a25e89b68321871be2 313 Gene3D G3DSA:3.30.70.250 124 195 3.0E-25 T 25-04-2017 CLFO_RS11275 45aa4a70854d50a25e89b68321871be2 313 SUPERFAMILY SSF52151 189 294 5.75E-68 T 25-04-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CLFO_RS11275 45aa4a70854d50a25e89b68321871be2 313 SUPERFAMILY SSF52151 4 121 5.75E-68 T 25-04-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CLFO_RS11275 45aa4a70854d50a25e89b68321871be2 313 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 290 8.2E-96 T 25-04-2017 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CLFO_RS11275 45aa4a70854d50a25e89b68321871be2 313 PIRSF PIRSF000446 1 311 1.2E-96 T 25-04-2017 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CLFO_RS15620 1aae99ac121251e627c6ab11f52e96ab 229 SMART SM00448 2 112 1.6E-39 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15620 1aae99ac121251e627c6ab11f52e96ab 229 Gene3D G3DSA:1.10.10.10 130 228 5.6E-38 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15620 1aae99ac121251e627c6ab11f52e96ab 229 SUPERFAMILY SSF52172 1 123 8.54E-39 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS15620 1aae99ac121251e627c6ab11f52e96ab 229 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-26 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15620 1aae99ac121251e627c6ab11f52e96ab 229 SMART SM00862 151 227 2.4E-28 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS15620 1aae99ac121251e627c6ab11f52e96ab 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 4.2E-27 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS15620 1aae99ac121251e627c6ab11f52e96ab 229 Gene3D G3DSA:3.40.50.2300 2 120 5.0E-38 T 25-04-2017 CLFO_RS15620 1aae99ac121251e627c6ab11f52e96ab 229 SUPERFAMILY SSF46894 128 228 3.12E-32 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS05245 df0ac7e8f7bca95c518e1e1755c55bfb 207 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 33 165 3.9E-21 T 25-04-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CLFO_RS05245 df0ac7e8f7bca95c518e1e1755c55bfb 207 SUPERFAMILY SSF48150 5 206 5.5E-71 T 25-04-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CLFO_RS05245 df0ac7e8f7bca95c518e1e1755c55bfb 207 SMART SM00478 37 184 2.2E-56 T 25-04-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CLFO_RS05245 df0ac7e8f7bca95c518e1e1755c55bfb 207 TIGRFAM TIGR01083 nth: endonuclease III 3 193 3.7E-82 T 25-04-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 CLFO_RS05245 df0ac7e8f7bca95c518e1e1755c55bfb 207 Gene3D G3DSA:1.10.1670.10 122 207 1.8E-35 T 25-04-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CLFO_RS05245 df0ac7e8f7bca95c518e1e1755c55bfb 207 PIRSF PIRSF001435 1 207 1.1E-57 T 25-04-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 CLFO_RS05245 df0ac7e8f7bca95c518e1e1755c55bfb 207 Hamap MF_00942 Endonuclease III [nth]. 1 207 35.91 T 25-04-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 CLFO_RS05245 df0ac7e8f7bca95c518e1e1755c55bfb 207 Gene3D G3DSA:1.10.340.30 21 121 3.5E-36 T 25-04-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CLFO_RS05245 df0ac7e8f7bca95c518e1e1755c55bfb 207 Pfam PF00633 Helix-hairpin-helix motif 99 126 6.1E-7 T 25-04-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CLFO_RS18485 32856bc52e08232bb581a04ef52afac7 302 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 180 5.9E-39 T 25-04-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLFO_RS18485 32856bc52e08232bb581a04ef52afac7 302 Gene3D G3DSA:3.30.1220.10 216 300 3.3E-8 T 25-04-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLFO_RS18485 32856bc52e08232bb581a04ef52afac7 302 SUPERFAMILY SSF90002 221 300 3.79E-8 T 25-04-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLFO_RS18485 32856bc52e08232bb581a04ef52afac7 302 SUPERFAMILY SSF52540 6 189 4.33E-21 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18485 32856bc52e08232bb581a04ef52afac7 302 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 220 300 8.7E-8 T 25-04-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLFO_RS18485 32856bc52e08232bb581a04ef52afac7 302 Gene3D G3DSA:3.40.50.300 1 195 3.1E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15595 8a161b8b728577f8aeebc0cbc512b5be 279 SUPERFAMILY SSF50249 142 211 2.43E-12 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS15595 8a161b8b728577f8aeebc0cbc512b5be 279 Pfam PF13509 S1 domain 72 131 1.4E-8 T 25-04-2017 CLFO_RS15595 8a161b8b728577f8aeebc0cbc512b5be 279 Pfam PF13509 S1 domain 4 66 2.3E-24 T 25-04-2017 CLFO_RS15595 8a161b8b728577f8aeebc0cbc512b5be 279 Gene3D G3DSA:2.40.50.140 143 215 1.7E-8 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS15595 8a161b8b728577f8aeebc0cbc512b5be 279 Pfam PF00575 S1 RNA binding domain 144 207 2.0E-7 T 25-04-2017 IPR003029 S1 domain GO:0003676 CLFO_RS15595 8a161b8b728577f8aeebc0cbc512b5be 279 SMART SM00316 144 207 2.5E-11 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS15595 8a161b8b728577f8aeebc0cbc512b5be 279 SMART SM00316 3 66 1.7 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS15595 8a161b8b728577f8aeebc0cbc512b5be 279 PIRSF PIRSF012524 1 278 1.5E-79 T 25-04-2017 IPR014464 Conserved virulence factor B CLFO_RS05615 68453ed5166f76937997e66e36ac1dd6 293 Gene3D G3DSA:3.20.20.220 3 293 1.3E-57 T 25-04-2017 IPR029041 FAD-linked oxidoreductase-like CLFO_RS05615 68453ed5166f76937997e66e36ac1dd6 293 Pfam PF02219 Methylenetetrahydrofolate reductase 4 292 1.4E-39 T 25-04-2017 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CLFO_RS05615 68453ed5166f76937997e66e36ac1dd6 293 SUPERFAMILY SSF51730 1 292 2.94E-71 T 25-04-2017 IPR029041 FAD-linked oxidoreductase-like CLFO_RS17790 cf9f6f9f93ae26372392c1e7365371f2 253 SMART SM00382 28 227 5.3E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS17790 cf9f6f9f93ae26372392c1e7365371f2 253 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS17790 cf9f6f9f93ae26372392c1e7365371f2 253 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 250 4.7E-8 T 25-04-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLFO_RS17790 cf9f6f9f93ae26372392c1e7365371f2 253 Pfam PF00005 ABC transporter 20 179 2.5E-35 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS17790 cf9f6f9f93ae26372392c1e7365371f2 253 Gene3D G3DSA:3.40.50.300 3 249 8.8E-73 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17790 cf9f6f9f93ae26372392c1e7365371f2 253 SUPERFAMILY SSF52540 3 249 9.78E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13225 e2a3ecf26f0d8185011b7f2062ec9de3 149 SUPERFAMILY SSF46785 3 63 5.09E-18 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13225 e2a3ecf26f0d8185011b7f2062ec9de3 149 Gene3D G3DSA:3.30.70.920 56 126 4.9E-12 T 25-04-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLFO_RS13225 e2a3ecf26f0d8185011b7f2062ec9de3 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 25-04-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CLFO_RS13225 e2a3ecf26f0d8185011b7f2062ec9de3 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.2E-16 T 25-04-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLFO_RS13225 e2a3ecf26f0d8185011b7f2062ec9de3 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.2E-16 T 25-04-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLFO_RS13225 e2a3ecf26f0d8185011b7f2062ec9de3 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.2E-16 T 25-04-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLFO_RS13225 e2a3ecf26f0d8185011b7f2062ec9de3 149 Gene3D G3DSA:1.10.10.10 2 54 3.1E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13225 e2a3ecf26f0d8185011b7f2062ec9de3 149 Pfam PF01037 Lrp/AsnC ligand binding domain 69 135 4.1E-10 T 25-04-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLFO_RS13225 e2a3ecf26f0d8185011b7f2062ec9de3 149 SMART SM00344 3 109 1.0E-36 T 25-04-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CLFO_RS13225 e2a3ecf26f0d8185011b7f2062ec9de3 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 9.1E-18 T 25-04-2017 CLFO_RS13225 e2a3ecf26f0d8185011b7f2062ec9de3 149 SUPERFAMILY SSF54909 65 137 1.22E-10 T 25-04-2017 IPR011008 Dimeric alpha-beta barrel CLFO_RS04445 70bc38d97c592e377eb058c7b2572b29 229 SMART SM00419 170 218 1.4E-14 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS04445 70bc38d97c592e377eb058c7b2572b29 229 Pfam PF13545 Crp-like helix-turn-helix domain 152 223 3.4E-17 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS04445 70bc38d97c592e377eb058c7b2572b29 229 SUPERFAMILY SSF46785 150 223 6.36E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS04445 70bc38d97c592e377eb058c7b2572b29 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 9.9E-6 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS04445 70bc38d97c592e377eb058c7b2572b29 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 9.9E-6 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS04445 70bc38d97c592e377eb058c7b2572b29 229 Gene3D G3DSA:1.10.10.10 149 225 5.2E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS04445 70bc38d97c592e377eb058c7b2572b29 229 SUPERFAMILY SSF51206 6 142 1.31E-28 T 25-04-2017 IPR018490 Cyclic nucleotide-binding-like CLFO_RS04445 70bc38d97c592e377eb058c7b2572b29 229 SMART SM00100 14 131 1.5E-9 T 25-04-2017 IPR000595 Cyclic nucleotide-binding domain CLFO_RS04445 70bc38d97c592e377eb058c7b2572b29 229 Gene3D G3DSA:2.60.120.10 11 143 2.1E-28 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS04445 70bc38d97c592e377eb058c7b2572b29 229 Pfam PF00027 Cyclic nucleotide-binding domain 34 117 5.3E-14 T 25-04-2017 IPR000595 Cyclic nucleotide-binding domain CLFO_RS12605 1e1b889d94044c5d72ee77551121a932 149 SUPERFAMILY SSF55729 1 141 1.62E-21 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS12605 1e1b889d94044c5d72ee77551121a932 149 Pfam PF00583 Acetyltransferase (GNAT) family 66 139 4.5E-13 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS12605 1e1b889d94044c5d72ee77551121a932 149 Gene3D G3DSA:3.40.630.30 1 140 2.1E-23 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS09765 3f36ed99826aff9a6f930b2bbe7593f8 266 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 3 266 4.3E-129 T 25-04-2017 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 CLFO_RS09765 3f36ed99826aff9a6f930b2bbe7593f8 266 PIRSF PIRSF002937 1 266 4.1E-133 T 25-04-2017 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 CLFO_RS09765 3f36ed99826aff9a6f930b2bbe7593f8 266 SUPERFAMILY SSF46894 148 263 3.91E-48 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS09765 3f36ed99826aff9a6f930b2bbe7593f8 266 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 156 259 8.0E-46 T 25-04-2017 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 CLFO_RS09765 3f36ed99826aff9a6f930b2bbe7593f8 266 Gene3D G3DSA:3.40.50.2300 3 132 2.4E-33 T 25-04-2017 CLFO_RS09765 3f36ed99826aff9a6f930b2bbe7593f8 266 Pfam PF00072 Response regulator receiver domain 7 120 1.7E-26 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS09765 3f36ed99826aff9a6f930b2bbe7593f8 266 SMART SM00448 5 120 1.7E-32 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS09765 3f36ed99826aff9a6f930b2bbe7593f8 266 Gene3D G3DSA:1.10.10.10 149 264 1.1E-58 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09765 3f36ed99826aff9a6f930b2bbe7593f8 266 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 156 264 4.0E-54 T 25-04-2017 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 CLFO_RS09765 3f36ed99826aff9a6f930b2bbe7593f8 266 SUPERFAMILY SSF52172 4 125 7.26E-34 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS19640 554620042b7ab4995eca7841be1e71af 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 26.01 T 25-04-2017 IPR023053 Ribosomal protein S14, type Z CLFO_RS19640 554620042b7ab4995eca7841be1e71af 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 25-04-2017 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19640 554620042b7ab4995eca7841be1e71af 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 6.8E-26 T 25-04-2017 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19640 554620042b7ab4995eca7841be1e71af 61 SUPERFAMILY SSF57716 4 61 6.06E-23 T 25-04-2017 CLFO_RS19640 554620042b7ab4995eca7841be1e71af 61 Gene3D G3DSA:4.10.830.10 2 61 1.2E-29 T 25-04-2017 CLFO_RS05550 18d6a40c7b8c19e61b7141d77a6dba28 430 SUPERFAMILY SSF109604 28 181 1.17E-18 T 25-04-2017 CLFO_RS05550 18d6a40c7b8c19e61b7141d77a6dba28 430 SUPERFAMILY SSF109604 224 393 6.28E-34 T 25-04-2017 CLFO_RS05550 18d6a40c7b8c19e61b7141d77a6dba28 430 SMART SM00471 230 365 2.3E-9 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS05550 18d6a40c7b8c19e61b7141d77a6dba28 430 SMART SM00471 24 153 3.2 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS05550 18d6a40c7b8c19e61b7141d77a6dba28 430 TIGRFAM TIGR00277 HDIG: HDIG domain 237 324 6.1E-8 T 25-04-2017 IPR006675 HDIG domain CLFO_RS05550 18d6a40c7b8c19e61b7141d77a6dba28 430 Gene3D G3DSA:1.10.3210.10 13 190 1.1E-20 T 25-04-2017 IPR006674 HD domain CLFO_RS05550 18d6a40c7b8c19e61b7141d77a6dba28 430 Gene3D G3DSA:1.10.3210.10 218 419 3.1E-29 T 25-04-2017 IPR006674 HD domain CLFO_RS05550 18d6a40c7b8c19e61b7141d77a6dba28 430 Pfam PF01966 HD domain 30 142 1.9E-16 T 25-04-2017 IPR006674 HD domain CLFO_RS05550 18d6a40c7b8c19e61b7141d77a6dba28 430 Pfam PF01966 HD domain 235 355 1.3E-17 T 25-04-2017 IPR006674 HD domain CLFO_RS16285 bc2f83195e2f37c0b2d5d36becdcd86b 215 TIGRFAM TIGR03608 L_ocin_972_ABC: putative bacteriocin export ABC transporter, lactococcin 972 group 8 209 3.6E-78 T 25-04-2017 IPR019895 Putative bacteriocin export ABC transporter, lactococcin 972 group CLFO_RS16285 bc2f83195e2f37c0b2d5d36becdcd86b 215 SMART SM00382 28 213 3.7E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS16285 bc2f83195e2f37c0b2d5d36becdcd86b 215 Gene3D G3DSA:3.40.50.300 2 210 1.4E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16285 bc2f83195e2f37c0b2d5d36becdcd86b 215 Pfam PF00005 ABC transporter 19 165 2.8E-32 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS16285 bc2f83195e2f37c0b2d5d36becdcd86b 215 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS16285 bc2f83195e2f37c0b2d5d36becdcd86b 215 SUPERFAMILY SSF52540 8 210 1.61E-57 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13200 7c0637aac55c0736869763d82187b610 502 Gene3D G3DSA:3.90.1150.10 366 488 1.0E-11 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS13200 7c0637aac55c0736869763d82187b610 502 SUPERFAMILY SSF46785 12 85 1.24E-19 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13200 7c0637aac55c0736869763d82187b610 502 Gene3D G3DSA:3.40.640.10 163 365 2.2E-68 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS13200 7c0637aac55c0736869763d82187b610 502 Pfam PF00155 Aminotransferase class I and II 162 478 1.4E-29 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS13200 7c0637aac55c0736869763d82187b610 502 Gene3D G3DSA:1.10.10.10 10 82 2.2E-22 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13200 7c0637aac55c0736869763d82187b610 502 SUPERFAMILY SSF53383 122 487 2.06E-93 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS13200 7c0637aac55c0736869763d82187b610 502 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 5.6E-6 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS13200 7c0637aac55c0736869763d82187b610 502 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 5.6E-6 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS13200 7c0637aac55c0736869763d82187b610 502 SMART SM00345 22 81 2.2E-17 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS13200 7c0637aac55c0736869763d82187b610 502 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 81 3.2E-17 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS08420 d0c9af753bcf18b74dab2fb390b48e6b 189 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 1 184 24.796 T 25-04-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CLFO_RS08420 d0c9af753bcf18b74dab2fb390b48e6b 189 Pfam PF04205 FMN-binding domain 92 178 9.2E-19 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS08420 d0c9af753bcf18b74dab2fb390b48e6b 189 SMART SM00900 92 182 9.3E-23 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS08420 d0c9af753bcf18b74dab2fb390b48e6b 189 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 8 183 7.1E-39 T 25-04-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CLFO_RS08420 d0c9af753bcf18b74dab2fb390b48e6b 189 PIRSF PIRSF006091 1 189 1.5E-43 T 25-04-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CLFO_RS16710 fd00e24698ddcdd9744ae9ed05dd691a 463 SUPERFAMILY SSF53850 23 458 1.85E-72 T 25-04-2017 CLFO_RS16710 fd00e24698ddcdd9744ae9ed05dd691a 463 Pfam PF01547 Bacterial extracellular solute-binding protein 58 366 2.4E-33 T 25-04-2017 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 CLFO_RS16710 fd00e24698ddcdd9744ae9ed05dd691a 463 Gene3D G3DSA:3.40.190.10 188 387 7.3E-41 T 25-04-2017 CLFO_RS16710 fd00e24698ddcdd9744ae9ed05dd691a 463 Gene3D G3DSA:3.40.190.10 53 187 2.1E-21 T 25-04-2017 CLFO_RS06515 c770f015a792e1f32a16fac36d009cf4 480 Pfam PF00939 Sodium:sulfate symporter transmembrane region 29 478 2.8E-66 T 25-04-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CLFO_RS06515 c770f015a792e1f32a16fac36d009cf4 480 PIRSF PIRSF002457 21 480 3.1E-108 T 25-04-2017 IPR030676 Citrate carrier CitT-related CLFO_RS06515 c770f015a792e1f32a16fac36d009cf4 480 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 46 474 7.8E-82 T 25-04-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 Gene3D G3DSA:3.40.50.1440 13 214 5.4E-98 T 25-04-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 331 7.7E-139 T 25-04-2017 IPR000158 Cell division protein FtsZ GO:0005525 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 SUPERFAMILY SSF52490 12 208 6.54E-73 T 25-04-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 353 39.697 T 25-04-2017 IPR000158 Cell division protein FtsZ GO:0005525 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 Gene3D G3DSA:3.30.1330.20 215 318 5.3E-51 T 25-04-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 SMART SM00864 13 205 3.1E-120 T 25-04-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 SUPERFAMILY SSF55307 204 320 5.04E-47 T 25-04-2017 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 25-04-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 Pfam PF12327 FtsZ family, C-terminal domain 222 316 1.6E-38 T 25-04-2017 IPR024757 Cell division protein FtsZ, C-terminal CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 25-04-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 PRINTS PR00423 Cell division protein FtsZ signature 98 118 4.0E-51 T 25-04-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 PRINTS PR00423 Cell division protein FtsZ signature 126 147 4.0E-51 T 25-04-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 PRINTS PR00423 Cell division protein FtsZ signature 189 211 4.0E-51 T 25-04-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 PRINTS PR00423 Cell division protein FtsZ signature 212 233 4.0E-51 T 25-04-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 173 2.7E-44 T 25-04-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CLFO_RS11695 684c4bba5f6b61baa3c907c7423f0ee0 362 SMART SM00865 207 324 2.1E-61 T 25-04-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 Pfam PF01434 Peptidase family M41 507 705 2.0E-46 T 25-04-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 Pfam PF04011 LemA family 15 178 1.7E-42 T 25-04-2017 IPR007156 LemA CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 Gene3D G3DSA:1.20.1440.20 19 178 4.9E-38 T 25-04-2017 IPR023353 LemA-like domain CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 SUPERFAMILY SSF52540 269 514 5.5E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 SUPERFAMILY SSF140478 30 174 5.1E-35 T 25-04-2017 IPR023353 LemA-like domain CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 7 708 30.482 T 25-04-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 SUPERFAMILY SSF140990 530 708 1.57E-49 T 25-04-2017 CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 229 706 1.7E-161 T 25-04-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 Gene3D G3DSA:1.10.8.60 455 520 5.6E-21 T 25-04-2017 CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 ProSitePatterns PS00674 AAA-protein family signature. 416 434 - T 25-04-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 SMART SM00382 309 448 3.1E-23 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 Gene3D G3DSA:3.40.50.300 269 454 4.9E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04455 c436e6edea8d19d5abd1f6b9338e38a5 711 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 313 445 1.8E-42 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS15045 cc8be5dfe9ec3619fb655421e8dea9b6 427 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 270 2.2E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15045 cc8be5dfe9ec3619fb655421e8dea9b6 427 SUPERFAMILY SSF47384 192 270 1.71E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15045 cc8be5dfe9ec3619fb655421e8dea9b6 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 1.5E-8 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15045 cc8be5dfe9ec3619fb655421e8dea9b6 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 1.5E-8 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15045 cc8be5dfe9ec3619fb655421e8dea9b6 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 1.5E-8 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15045 cc8be5dfe9ec3619fb655421e8dea9b6 427 SMART SM00388 205 272 3.9E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15045 cc8be5dfe9ec3619fb655421e8dea9b6 427 Gene3D G3DSA:3.30.565.10 259 425 4.1E-43 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15045 cc8be5dfe9ec3619fb655421e8dea9b6 427 Gene3D G3DSA:1.10.287.130 199 258 4.1E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15045 cc8be5dfe9ec3619fb655421e8dea9b6 427 SMART SM00387 317 427 3.8E-32 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15045 cc8be5dfe9ec3619fb655421e8dea9b6 427 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 425 6.9E-24 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15045 cc8be5dfe9ec3619fb655421e8dea9b6 427 SUPERFAMILY SSF55874 261 425 3.01E-40 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16195 7cf55c9b5ab30c471a97e75691f12e59 205 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 115 127 4.6E-17 T 25-04-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLFO_RS16195 7cf55c9b5ab30c471a97e75691f12e59 205 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 30 46 4.6E-17 T 25-04-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLFO_RS16195 7cf55c9b5ab30c471a97e75691f12e59 205 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 159 178 4.6E-17 T 25-04-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLFO_RS16195 7cf55c9b5ab30c471a97e75691f12e59 205 Gene3D G3DSA:2.10.109.10 27 125 3.1E-31 T 25-04-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain CLFO_RS16195 7cf55c9b5ab30c471a97e75691f12e59 205 Gene3D G3DSA:2.10.109.10 159 203 3.1E-31 T 25-04-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain CLFO_RS16195 7cf55c9b5ab30c471a97e75691f12e59 205 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 15 200 5.1E-35 T 25-04-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CLFO_RS16195 7cf55c9b5ab30c471a97e75691f12e59 205 SUPERFAMILY SSF51306 30 205 6.8E-42 T 25-04-2017 IPR015927 Peptidase S24/S26A/S26B/S26C CLFO_RS16195 7cf55c9b5ab30c471a97e75691f12e59 205 ProSitePatterns PS00761 Signal peptidases I signature 3. 164 177 - T 25-04-2017 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CLFO_RS16195 7cf55c9b5ab30c471a97e75691f12e59 205 Pfam PF10502 Signal peptidase, peptidase S26 114 192 2.8E-8 T 25-04-2017 IPR019533 Peptidase S26 CLFO_RS01950 3311ca27ee033eb2adbdc9d9e475c15d 363 Pfam PF13534 4Fe-4S dicluster domain 281 351 2.9E-7 T 25-04-2017 CLFO_RS01950 3311ca27ee033eb2adbdc9d9e475c15d 363 Gene3D G3DSA:3.20.20.100 1 256 8.3E-38 T 25-04-2017 IPR023210 NADP-dependent oxidoreductase domain CLFO_RS01950 3311ca27ee033eb2adbdc9d9e475c15d 363 SUPERFAMILY SSF54862 264 358 2.3E-7 T 25-04-2017 CLFO_RS01950 3311ca27ee033eb2adbdc9d9e475c15d 363 Pfam PF00248 Aldo/keto reductase family 16 271 2.3E-26 T 25-04-2017 IPR023210 NADP-dependent oxidoreductase domain CLFO_RS01950 3311ca27ee033eb2adbdc9d9e475c15d 363 SUPERFAMILY SSF51430 1 300 2.49E-47 T 25-04-2017 IPR023210 NADP-dependent oxidoreductase domain CLFO_RS01950 3311ca27ee033eb2adbdc9d9e475c15d 363 Gene3D G3DSA:1.10.1060.10 257 360 3.7E-8 T 25-04-2017 CLFO_RS08805 d3c5366e38c82190bba76880f38f4eb7 135 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 7 131 2.7E-9 T 25-04-2017 IPR010064 Bacteriophage HK97-gp10, putative tail-component CLFO_RS08805 d3c5366e38c82190bba76880f38f4eb7 135 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 11 89 1.1E-7 T 25-04-2017 IPR010064 Bacteriophage HK97-gp10, putative tail-component CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 Gene3D G3DSA:3.40.50.620 210 260 3.2E-42 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 Gene3D G3DSA:3.40.50.620 27 95 3.2E-42 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 548 2.7E-229 T 25-04-2017 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 548 52.234 T 25-04-2017 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 218 9.7E-11 T 25-04-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 30 42 9.7E-11 T 25-04-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 59 72 9.7E-11 T 25-04-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 55 9.7E-11 T 25-04-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 26 335 2.6E-111 T 25-04-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 Gene3D G3DSA:2.40.240.10 461 545 3.1E-33 T 25-04-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 Gene3D G3DSA:1.10.1160.10 261 336 3.0E-38 T 25-04-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 33 44 - T 25-04-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 SUPERFAMILY SSF52374 9 335 5.63E-101 T 25-04-2017 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 Gene3D G3DSA:2.40.240.10 346 460 1.4E-54 T 25-04-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 Gene3D G3DSA:3.90.800.10 99 207 8.3E-48 T 25-04-2017 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 338 527 3.0E-61 T 25-04-2017 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLFO_RS20460 15b62cdb5ee2e13e5e2d56fb74e928fc 550 SUPERFAMILY SSF50715 338 546 3.61E-77 T 25-04-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLFO_RS08610 3b5280789b39ce17e868d1829ce474bb 441 SMART SM00936 288 379 1.2E-18 T 25-04-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLFO_RS08610 3b5280789b39ce17e868d1829ce474bb 441 Gene3D G3DSA:3.40.710.10 11 286 2.1E-87 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS08610 3b5280789b39ce17e868d1829ce474bb 441 SUPERFAMILY SSF56601 1 288 2.15E-69 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS08610 3b5280789b39ce17e868d1829ce474bb 441 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 288 378 1.1E-13 T 25-04-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLFO_RS08610 3b5280789b39ce17e868d1829ce474bb 441 SUPERFAMILY SSF69189 280 378 1.61E-16 T 25-04-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLFO_RS08610 3b5280789b39ce17e868d1829ce474bb 441 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 106 123 1.3E-12 T 25-04-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLFO_RS08610 3b5280789b39ce17e868d1829ce474bb 441 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 1.3E-12 T 25-04-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLFO_RS08610 3b5280789b39ce17e868d1829ce474bb 441 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 133 146 1.3E-12 T 25-04-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLFO_RS08610 3b5280789b39ce17e868d1829ce474bb 441 Gene3D G3DSA:2.60.410.10 288 378 6.4E-16 T 25-04-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLFO_RS08610 3b5280789b39ce17e868d1829ce474bb 441 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 25 269 1.3E-54 T 25-04-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CLFO_RS17555 3ce52ad912cf806f6c164c4e57aea973 301 SMART SM01222 6 183 2.8E-111 T 25-04-2017 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 CLFO_RS17555 3ce52ad912cf806f6c164c4e57aea973 301 Pfam PF02971 Formiminotransferase domain 185 288 6.1E-25 T 25-04-2017 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS17555 3ce52ad912cf806f6c164c4e57aea973 301 TIGRFAM TIGR02024 FtcD: glutamate formiminotransferase 5 300 4.6E-135 T 25-04-2017 IPR004227 Formiminotransferase catalytic domain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS17555 3ce52ad912cf806f6c164c4e57aea973 301 Gene3D G3DSA:3.30.70.670 185 300 1.6E-49 T 25-04-2017 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS17555 3ce52ad912cf806f6c164c4e57aea973 301 SUPERFAMILY SSF55116 184 300 2.04E-47 T 25-04-2017 IPR022384 Formiminotransferase subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 CLFO_RS17555 3ce52ad912cf806f6c164c4e57aea973 301 SMART SM01221 184 298 5.4E-76 T 25-04-2017 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS17555 3ce52ad912cf806f6c164c4e57aea973 301 Gene3D G3DSA:3.30.990.10 5 183 3.7E-76 T 25-04-2017 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 CLFO_RS17555 3ce52ad912cf806f6c164c4e57aea973 301 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 7 182 2.3E-75 T 25-04-2017 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 CLFO_RS17555 3ce52ad912cf806f6c164c4e57aea973 301 SUPERFAMILY SSF55116 6 183 2.35E-71 T 25-04-2017 IPR022384 Formiminotransferase subdomain GO:0005542|GO:0008152|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 CLFO_RS00395 5e2415fe708d4a864c833820aa083018 177 Gene3D G3DSA:3.40.30.10 3 175 5.8E-19 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS00395 5e2415fe708d4a864c833820aa083018 177 SUPERFAMILY SSF52833 6 171 1.06E-16 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS00395 5e2415fe708d4a864c833820aa083018 177 Pfam PF00578 AhpC/TSA family 55 155 2.5E-9 T 25-04-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CLFO_RS06990 6d6ff6a85546f55ad1eabd9514adf62e 535 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 54 503 6.1E-132 T 25-04-2017 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CLFO_RS06990 6d6ff6a85546f55ad1eabd9514adf62e 535 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 73 80 - T 25-04-2017 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CLFO_RS06990 6d6ff6a85546f55ad1eabd9514adf62e 535 Gene3D G3DSA:3.40.50.1980 197 306 3.0E-43 T 25-04-2017 CLFO_RS06990 6d6ff6a85546f55ad1eabd9514adf62e 535 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 9 518 5.3E-209 T 25-04-2017 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CLFO_RS06990 6d6ff6a85546f55ad1eabd9514adf62e 535 SUPERFAMILY SSF53807 5 520 1.99E-166 T 25-04-2017 CLFO_RS06990 6d6ff6a85546f55ad1eabd9514adf62e 535 Gene3D G3DSA:3.40.50.1980 6 154 6.7E-63 T 25-04-2017 CLFO_RS06990 6d6ff6a85546f55ad1eabd9514adf62e 535 Gene3D G3DSA:3.40.50.1980 334 376 3.4E-58 T 25-04-2017 CLFO_RS06990 6d6ff6a85546f55ad1eabd9514adf62e 535 Gene3D G3DSA:3.40.50.1980 428 526 3.4E-58 T 25-04-2017 CLFO_RS06990 6d6ff6a85546f55ad1eabd9514adf62e 535 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 143 157 - T 25-04-2017 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CLFO_RS06990 6d6ff6a85546f55ad1eabd9514adf62e 535 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 22 511 1.4E-185 T 25-04-2017 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CLFO_RS03750 1bb5b6cfbd99fe27e498af3b346676ee 523 Gene3D G3DSA:3.40.50.2300 3 138 1.1E-34 T 25-04-2017 CLFO_RS03750 1bb5b6cfbd99fe27e498af3b346676ee 523 Gene3D G3DSA:1.10.10.60 475 520 3.0E-15 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS03750 1bb5b6cfbd99fe27e498af3b346676ee 523 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 475 517 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS03750 1bb5b6cfbd99fe27e498af3b346676ee 523 Pfam PF12833 Helix-turn-helix domain 445 521 1.4E-21 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS03750 1bb5b6cfbd99fe27e498af3b346676ee 523 Gene3D G3DSA:1.10.10.60 417 474 5.8E-17 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS03750 1bb5b6cfbd99fe27e498af3b346676ee 523 Pfam PF00072 Response regulator receiver domain 9 121 6.9E-25 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS03750 1bb5b6cfbd99fe27e498af3b346676ee 523 SUPERFAMILY SSF46689 422 472 7.26E-8 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS03750 1bb5b6cfbd99fe27e498af3b346676ee 523 SMART SM00342 438 521 6.3E-32 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS03750 1bb5b6cfbd99fe27e498af3b346676ee 523 SMART SM00448 6 121 2.6E-30 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS03750 1bb5b6cfbd99fe27e498af3b346676ee 523 SUPERFAMILY SSF46689 474 522 9.41E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS03750 1bb5b6cfbd99fe27e498af3b346676ee 523 SUPERFAMILY SSF52172 4 163 3.13E-34 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS09655 04b84163009384a6c76942bc25d5c0ad 339 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 41 321 9.7E-113 T 25-04-2017 IPR014217 Sporulation stage III, protein AA CLFO_RS09655 04b84163009384a6c76942bc25d5c0ad 339 Gene3D G3DSA:3.40.50.300 148 287 2.0E-12 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09655 04b84163009384a6c76942bc25d5c0ad 339 SUPERFAMILY SSF52540 76 297 1.25E-13 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09655 04b84163009384a6c76942bc25d5c0ad 339 SMART SM00382 162 311 0.002 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS00165 62465ea6227f705f615c2e740cb01d21 290 Pfam PF00924 Mechanosensitive ion channel 81 278 8.8E-47 T 25-04-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CLFO_RS00165 62465ea6227f705f615c2e740cb01d21 290 Gene3D G3DSA:3.30.70.100 189 276 2.1E-13 T 25-04-2017 CLFO_RS00165 62465ea6227f705f615c2e740cb01d21 290 SUPERFAMILY SSF82861 33 122 3.14E-13 T 25-04-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CLFO_RS00165 62465ea6227f705f615c2e740cb01d21 290 SUPERFAMILY SSF50182 124 185 9.48E-15 T 25-04-2017 IPR010920 LSM domain CLFO_RS00165 62465ea6227f705f615c2e740cb01d21 290 SUPERFAMILY SSF82689 188 287 5.75E-22 T 25-04-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CLFO_RS00165 62465ea6227f705f615c2e740cb01d21 290 Gene3D G3DSA:2.30.30.60 139 185 1.7E-15 T 25-04-2017 CLFO_RS03120 5521ee670262438c1da51e8ee27fa735 355 Gene3D G3DSA:3.30.565.10 185 353 1.7E-39 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03120 5521ee670262438c1da51e8ee27fa735 355 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 246 353 1.9E-23 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03120 5521ee670262438c1da51e8ee27fa735 355 Pfam PF00512 His Kinase A (phospho-acceptor) domain 135 199 4.1E-9 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS03120 5521ee670262438c1da51e8ee27fa735 355 SMART SM00388 132 200 1.7E-8 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS03120 5521ee670262438c1da51e8ee27fa735 355 SMART SM00387 245 355 2.8E-30 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03120 5521ee670262438c1da51e8ee27fa735 355 SUPERFAMILY SSF47384 126 200 1.18E-10 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS03120 5521ee670262438c1da51e8ee27fa735 355 Gene3D G3DSA:1.10.287.130 127 184 3.1E-9 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS03120 5521ee670262438c1da51e8ee27fa735 355 SUPERFAMILY SSF55874 190 353 6.16E-38 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03120 5521ee670262438c1da51e8ee27fa735 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 310 4.7E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03120 5521ee670262438c1da51e8ee27fa735 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 352 4.7E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03120 5521ee670262438c1da51e8ee27fa735 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 4.7E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03120 5521ee670262438c1da51e8ee27fa735 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 4.7E-15 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 Pfam PF00082 Subtilase family 1270 1515 9.3E-45 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 Pfam PF00395 S-layer homology domain 93 133 1.0E-9 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 Pfam PF00395 S-layer homology domain 34 73 3.1E-12 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 Pfam PF00395 S-layer homology domain 152 195 6.7E-13 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 Gene3D G3DSA:2.60.40.10 427 516 2.3E-6 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 PRINTS PR00723 Subtilisin serine protease family (S8) signature 1468 1484 5.5E-17 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 PRINTS PR00723 Subtilisin serine protease family (S8) signature 1308 1321 5.5E-17 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 PRINTS PR00723 Subtilisin serine protease family (S8) signature 1269 1288 5.5E-17 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 SUPERFAMILY SSF49265 428 633 3.82E-8 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 1469 1479 - T 25-04-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 Gene3D G3DSA:2.60.40.10 913 976 1.2E-6 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 Gene3D G3DSA:3.40.50.200 1197 1524 9.7E-85 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS13680 f5b4ea1ef7348cae64d73c6edbe48c52 1621 SUPERFAMILY SSF52743 1252 1525 4.32E-83 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS16205 aad3bed5fc2bceef19b25cbc4941bafe 464 Pfam PF03734 L,D-transpeptidase catalytic domain 322 460 3.6E-10 T 25-04-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CLFO_RS16205 aad3bed5fc2bceef19b25cbc4941bafe 464 SUPERFAMILY SSF141523 323 458 3.27E-7 T 25-04-2017 CLFO_RS16205 aad3bed5fc2bceef19b25cbc4941bafe 464 Gene3D G3DSA:2.40.440.10 322 461 1.7E-4 T 25-04-2017 CLFO_RS14565 6013c4cdc1734a3c7fbed86e2e56a503 333 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 2 332 1.0E-149 T 25-04-2017 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CLFO_RS14565 6013c4cdc1734a3c7fbed86e2e56a503 333 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 333 160.464 T 25-04-2017 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CLFO_RS14565 6013c4cdc1734a3c7fbed86e2e56a503 333 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 266 332 3.0E-21 T 25-04-2017 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CLFO_RS14565 6013c4cdc1734a3c7fbed86e2e56a503 333 SUPERFAMILY SSF51569 1 265 6.41E-67 T 25-04-2017 CLFO_RS14565 6013c4cdc1734a3c7fbed86e2e56a503 333 SUPERFAMILY SSF89000 284 332 3.33E-17 T 25-04-2017 CLFO_RS14565 6013c4cdc1734a3c7fbed86e2e56a503 333 Gene3D G3DSA:3.20.20.70 1 258 8.0E-57 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS14565 6013c4cdc1734a3c7fbed86e2e56a503 333 Gene3D G3DSA:1.10.8.60 274 333 1.7E-29 T 25-04-2017 CLFO_RS14565 6013c4cdc1734a3c7fbed86e2e56a503 333 Pfam PF00682 HMGL-like 4 259 2.9E-59 T 25-04-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLFO_RS14565 6013c4cdc1734a3c7fbed86e2e56a503 333 Pfam PF07836 DmpG-like communication domain 273 331 2.6E-29 T 25-04-2017 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CLFO_RS16985 e0af179a954181b832a0ab1c7ff7171c 140 Gene3D G3DSA:1.10.10.10 74 137 2.3E-9 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16985 e0af179a954181b832a0ab1c7ff7171c 140 SUPERFAMILY SSF88659 68 137 2.24E-11 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS16985 e0af179a954181b832a0ab1c7ff7171c 140 Pfam PF08281 Sigma-70, region 4 80 131 4.5E-7 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS18915 134a3a95daaad4dab46bb5e1a3801213 411 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 25-04-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS18915 134a3a95daaad4dab46bb5e1a3801213 411 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 391 4.8E-153 T 25-04-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS18915 134a3a95daaad4dab46bb5e1a3801213 411 Gene3D G3DSA:3.90.1260.10 175 400 2.7E-96 T 25-04-2017 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS18915 134a3a95daaad4dab46bb5e1a3801213 411 Gene3D G3DSA:3.40.50.620 4 172 1.9E-63 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS18915 134a3a95daaad4dab46bb5e1a3801213 411 SUPERFAMILY SSF69864 172 399 1.01E-92 T 25-04-2017 CLFO_RS18915 134a3a95daaad4dab46bb5e1a3801213 411 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 398 53.382 T 25-04-2017 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS18915 134a3a95daaad4dab46bb5e1a3801213 411 SUPERFAMILY SSF52402 1 172 6.62E-47 T 25-04-2017 CLFO_RS18915 134a3a95daaad4dab46bb5e1a3801213 411 Pfam PF00764 Arginosuccinate synthase 7 391 2.5E-162 T 25-04-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS18915 134a3a95daaad4dab46bb5e1a3801213 411 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 25-04-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS10020 2804a7df4511f6561f3b608f10ae1c1f 381 SUPERFAMILY SSF56796 3 379 1.02E-127 T 25-04-2017 CLFO_RS10020 2804a7df4511f6561f3b608f10ae1c1f 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 372 1.8E-119 T 25-04-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLFO_RS10020 2804a7df4511f6561f3b608f10ae1c1f 381 Gene3D G3DSA:3.40.50.1970 2 182 6.2E-59 T 25-04-2017 CLFO_RS10020 2804a7df4511f6561f3b608f10ae1c1f 381 Gene3D G3DSA:1.20.1090.10 183 380 1.9E-71 T 25-04-2017 CLFO_RS10020 2804a7df4511f6561f3b608f10ae1c1f 381 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 25-04-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLFO_RS10020 2804a7df4511f6561f3b608f10ae1c1f 381 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 258 278 - T 25-04-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLFO_RS09175 39908f437536206ceda0b8d59634b160 231 SUPERFAMILY SSF53448 39 183 5.91E-5 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS09175 39908f437536206ceda0b8d59634b160 231 Pfam PF11316 Putative rhamnosyl transferase 24 157 1.2E-9 T 25-04-2017 IPR021466 Putative rhamnosyl transferase CLFO_RS09175 39908f437536206ceda0b8d59634b160 231 Gene3D G3DSA:3.90.550.10 39 153 5.4E-5 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS10890 6e9398350ece9825e503179f4f031b14 90 SUPERFAMILY SSF64376 4 86 4.84E-29 T 25-04-2017 IPR007393 Domain of unknown function DUF448 CLFO_RS10890 6e9398350ece9825e503179f4f031b14 90 Gene3D G3DSA:3.30.1230.10 1 86 2.3E-35 T 25-04-2017 IPR007393 Domain of unknown function DUF448 CLFO_RS10890 6e9398350ece9825e503179f4f031b14 90 Pfam PF04296 Protein of unknown function (DUF448) 9 82 9.9E-31 T 25-04-2017 IPR007393 Domain of unknown function DUF448 CLFO_RS15745 7495b4fcf4b714ef864b7e9711608ed7 290 Gene3D G3DSA:3.40.190.10 48 129 2.4E-5 T 25-04-2017 CLFO_RS15745 7495b4fcf4b714ef864b7e9711608ed7 290 SUPERFAMILY SSF53850 27 282 3.47E-45 T 25-04-2017 CLFO_RS15745 7495b4fcf4b714ef864b7e9711608ed7 290 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 30 272 5.9E-77 T 25-04-2017 CLFO_RS15745 7495b4fcf4b714ef864b7e9711608ed7 290 Gene3D G3DSA:3.40.190.10 130 235 2.1E-17 T 25-04-2017 CLFO_RS15745 7495b4fcf4b714ef864b7e9711608ed7 290 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 245 1.7E-68 T 25-04-2017 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 CLFO_RS15745 7495b4fcf4b714ef864b7e9711608ed7 290 SMART SM00062 27 261 6.1E-4 T 25-04-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLFO_RS10955 15cbdb620eddd4c0cac8f09f3d7583d1 215 Gene3D G3DSA:3.30.479.20 155 199 2.7E-37 T 25-04-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS10955 15cbdb620eddd4c0cac8f09f3d7583d1 215 Gene3D G3DSA:3.30.479.20 56 109 2.7E-37 T 25-04-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS10955 15cbdb620eddd4c0cac8f09f3d7583d1 215 Gene3D G3DSA:1.10.286.20 110 154 1.9E-21 T 25-04-2017 CLFO_RS10955 15cbdb620eddd4c0cac8f09f3d7583d1 215 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 25-04-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS10955 15cbdb620eddd4c0cac8f09f3d7583d1 215 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 95 4.7E-39 T 25-04-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS10955 15cbdb620eddd4c0cac8f09f3d7583d1 215 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 91 214 3.1E-43 T 25-04-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS10955 15cbdb620eddd4c0cac8f09f3d7583d1 215 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 25-04-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS10955 15cbdb620eddd4c0cac8f09f3d7583d1 215 Hamap MF_00050 Elongation factor Ts [tsf]. 1 213 57.397 T 25-04-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS10955 15cbdb620eddd4c0cac8f09f3d7583d1 215 SUPERFAMILY SSF54713 59 214 4.97E-56 T 25-04-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS10955 15cbdb620eddd4c0cac8f09f3d7583d1 215 SUPERFAMILY SSF46934 1 55 4.23E-19 T 25-04-2017 IPR009060 UBA-like GO:0005515 CLFO_RS10955 15cbdb620eddd4c0cac8f09f3d7583d1 215 Gene3D G3DSA:1.10.8.10 1 54 2.8E-27 T 25-04-2017 CLFO_RS10955 15cbdb620eddd4c0cac8f09f3d7583d1 215 Pfam PF00889 Elongation factor TS 27 196 7.7E-45 T 25-04-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CLFO_RS21060 5736ced2fb9808d237773d8650bf8f2f 84 Pfam PF04647 Accessory gene regulator B 6 73 2.0E-15 T 25-04-2017 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLFO_RS09450 623c541ec3be9ffc021bcb4898f40a08 120 PIRSF PIRSF019455 1 120 1.1E-21 T 25-04-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLFO_RS09450 623c541ec3be9ffc021bcb4898f40a08 120 SUPERFAMILY SSF46785 4 119 8.86E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09450 623c541ec3be9ffc021bcb4898f40a08 120 Pfam PF03965 Penicillinase repressor 8 115 3.7E-21 T 25-04-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLFO_RS09450 623c541ec3be9ffc021bcb4898f40a08 120 Gene3D G3DSA:1.10.10.10 5 75 4.5E-13 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10665 2c2df65c7dd6eb1b289bc3ac84155649 340 Pfam PF05343 M42 glutamyl aminopeptidase 40 326 1.4E-92 T 25-04-2017 IPR008007 Peptidase M42 CLFO_RS10665 2c2df65c7dd6eb1b289bc3ac84155649 340 PIRSF PIRSF001123 1 339 5.2E-116 T 25-04-2017 IPR008007 Peptidase M42 CLFO_RS10665 2c2df65c7dd6eb1b289bc3ac84155649 340 SUPERFAMILY SSF101821 65 170 1.83E-26 T 25-04-2017 CLFO_RS10665 2c2df65c7dd6eb1b289bc3ac84155649 340 Gene3D G3DSA:3.40.630.10 159 336 1.6E-72 T 25-04-2017 CLFO_RS10665 2c2df65c7dd6eb1b289bc3ac84155649 340 Gene3D G3DSA:3.40.630.10 2 66 1.6E-72 T 25-04-2017 CLFO_RS10665 2c2df65c7dd6eb1b289bc3ac84155649 340 Gene3D G3DSA:2.40.30.40 67 152 3.4E-33 T 25-04-2017 IPR023367 Peptidase M42, domain 2 CLFO_RS10665 2c2df65c7dd6eb1b289bc3ac84155649 340 SUPERFAMILY SSF53187 162 334 3.14E-60 T 25-04-2017 CLFO_RS10665 2c2df65c7dd6eb1b289bc3ac84155649 340 SUPERFAMILY SSF53187 2 75 3.14E-60 T 25-04-2017 CLFO_RS05290 a556029f986789bd009bc164a8bd018a 245 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 245 40.812 T 25-04-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CLFO_RS05290 a556029f986789bd009bc164a8bd018a 245 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 7 235 4.3E-43 T 25-04-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CLFO_RS05290 a556029f986789bd009bc164a8bd018a 245 Pfam PF02654 Cobalamin-5-phosphate synthase 8 234 6.8E-55 T 25-04-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CLFO_RS05155 71f476ca9d68c20d0b6b5f702e209d00 84 PIRSF PIRSF010606 1 82 1.4E-33 T 25-04-2017 IPR016571 Spore coat assembly protein CotJB CLFO_RS05155 71f476ca9d68c20d0b6b5f702e209d00 84 Pfam PF12652 CotJB protein 7 81 2.2E-29 T 25-04-2017 IPR024207 Spore coat assembly protein CotJB, domain CLFO_RS20400 44763027f81a776a08d6285501da41d2 124 SUPERFAMILY SSF49367 7 121 9.94E-34 T 25-04-2017 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 CLFO_RS20400 44763027f81a776a08d6285501da41d2 124 Gene3D G3DSA:2.60.40.730 8 123 6.9E-38 T 25-04-2017 CLFO_RS20400 44763027f81a776a08d6285501da41d2 124 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 10 122 8.2E-24 T 25-04-2017 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 CLFO_RS20400 44763027f81a776a08d6285501da41d2 124 Pfam PF01880 Desulfoferrodoxin 11 117 2.8E-29 T 25-04-2017 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 CLFO_RS08465 cac1977f1e19f1c3109ad6514e0d99c4 276 Pfam PF04085 rod shape-determining protein MreC 127 272 3.0E-39 T 25-04-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 CLFO_RS08465 cac1977f1e19f1c3109ad6514e0d99c4 276 PIRSF PIRSF038471 2 276 5.2E-67 T 25-04-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 CLFO_RS08465 cac1977f1e19f1c3109ad6514e0d99c4 276 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 13 274 3.9E-37 T 25-04-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 Gene3D G3DSA:1.10.240.10 231 312 8.8E-39 T 25-04-2017 CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 Gene3D G3DSA:3.40.50.620 2 230 3.3E-93 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 SUPERFAMILY SSF52374 1 319 5.63E-94 T 25-04-2017 CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 Pfam PF01479 S4 domain 346 387 2.6E-5 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 1 406 7.2E-127 T 25-04-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 Gene3D G3DSA:3.10.290.10 313 407 1.1E-29 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 SUPERFAMILY SSF55174 302 406 7.91E-15 T 25-04-2017 CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 2.0E-21 T 25-04-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 2.0E-21 T 25-04-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 2.0E-21 T 25-04-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 2.0E-21 T 25-04-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 407 42.065 T 25-04-2017 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 CLFO_RS05545 d4c46a2b8e0f9474abbc6e0697457bbf 408 Pfam PF00579 tRNA synthetases class I (W and Y) 30 319 9.2E-78 T 25-04-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS02845 efdbd6ec679f233c9e6acd732ece9063 336 Gene3D G3DSA:3.40.718.10 1 334 1.6E-139 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS02845 efdbd6ec679f233c9e6acd732ece9063 336 TIGRFAM TIGR00175 mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 2 330 1.9E-131 T 25-04-2017 IPR004434 Isocitrate dehydrogenase NAD-dependent GO:0004449|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.41|MetaCyc: PWY-5690|MetaCyc: PWY-6549|Reactome: R-HSA-71403 CLFO_RS02845 efdbd6ec679f233c9e6acd732ece9063 336 SMART SM01329 4 328 3.1E-182 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS02845 efdbd6ec679f233c9e6acd732ece9063 336 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 224 243 - T 25-04-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CLFO_RS02845 efdbd6ec679f233c9e6acd732ece9063 336 SUPERFAMILY SSF53659 1 332 5.76E-129 T 25-04-2017 CLFO_RS02845 efdbd6ec679f233c9e6acd732ece9063 336 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 328 1.2E-105 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 519 573 1.6E-4 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SUPERFAMILY SSF81296 1357 1433 6.65E-5 T 25-04-2017 IPR014756 Immunoglobulin E-set CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 1683 1772 7.7E-8 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 1361 1433 7.1E-6 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 1457 1549 1.2E-15 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 866 920 1.3E-6 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 926 1017 5.4E-14 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 1274 1331 2.1E-10 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 264 355 7.7E-5 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 1551 1579 1.2E-9 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 1615 1672 1.2E-9 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 1133 1168 2.1E-10 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 784 829 1.3E-6 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 697 777 1.2E-7 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Gene3D G3DSA:2.60.40.10 1022 1129 1.3E-16 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SUPERFAMILY SSF81296 696 770 9.8E-6 T 25-04-2017 IPR014756 Immunoglobulin E-set CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SUPERFAMILY SSF81296 1457 1543 5.14E-11 T 25-04-2017 IPR014756 Immunoglobulin E-set CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SUPERFAMILY SSF81296 1021 1125 2.71E-7 T 25-04-2017 IPR014756 Immunoglobulin E-set CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SUPERFAMILY SSF81296 926 1017 1.4E-8 T 25-04-2017 IPR014756 Immunoglobulin E-set CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SMART SM00429 926 1017 11.0 T 25-04-2017 IPR002909 IPT domain GO:0005515 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SMART SM00429 1133 1331 0.83 T 25-04-2017 IPR002909 IPT domain GO:0005515 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SMART SM00429 1022 1130 0.14 T 25-04-2017 IPR002909 IPT domain GO:0005515 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SMART SM00429 1457 1550 4.4E-4 T 25-04-2017 IPR002909 IPT domain GO:0005515 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SMART SM00429 697 780 13.0 T 25-04-2017 IPR002909 IPT domain GO:0005515 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Pfam PF01833 IPT/TIG domain 1458 1537 1.1E-8 T 25-04-2017 IPR002909 IPT domain GO:0005515 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Pfam PF01833 IPT/TIG domain 698 768 4.1E-4 T 25-04-2017 IPR002909 IPT domain GO:0005515 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Pfam PF01833 IPT/TIG domain 927 1016 3.7E-6 T 25-04-2017 IPR002909 IPT domain GO:0005515 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Pfam PF01833 IPT/TIG domain 1023 1129 1.3E-8 T 25-04-2017 IPR002909 IPT domain GO:0005515 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 Pfam PF01833 IPT/TIG domain 1361 1429 1.3E-5 T 25-04-2017 IPR002909 IPT domain GO:0005515 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SUPERFAMILY SSF81296 1134 1174 7.19E-6 T 25-04-2017 IPR014756 Immunoglobulin E-set CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 1465 1474 - T 25-04-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SMART SM00060 1677 1758 2.9E-4 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SUPERFAMILY SSF49265 1673 1770 4.38E-9 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SUPERFAMILY SSF81296 1615 1672 1.08E-5 T 25-04-2017 IPR014756 Immunoglobulin E-set CLFO_RS00635 13f23deb77e9dd9e0b066144944c0ce2 1991 SUPERFAMILY SSF81296 1552 1579 1.08E-5 T 25-04-2017 IPR014756 Immunoglobulin E-set CLFO_RS06835 259ae74396e9eae88de954e7d526240b 216 SUPERFAMILY SSF52172 3 122 2.7E-37 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS06835 259ae74396e9eae88de954e7d526240b 216 SMART SM00862 143 214 1.9E-26 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS06835 259ae74396e9eae88de954e7d526240b 216 SUPERFAMILY SSF46894 116 215 4.16E-29 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS06835 259ae74396e9eae88de954e7d526240b 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 214 2.2E-26 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS06835 259ae74396e9eae88de954e7d526240b 216 SMART SM00448 2 111 3.7E-38 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS06835 259ae74396e9eae88de954e7d526240b 216 Gene3D G3DSA:1.10.10.10 122 215 1.5E-31 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06835 259ae74396e9eae88de954e7d526240b 216 Pfam PF00072 Response regulator receiver domain 4 112 5.9E-27 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS06835 259ae74396e9eae88de954e7d526240b 216 Gene3D G3DSA:3.40.50.2300 3 121 7.1E-37 T 25-04-2017 CLFO_RS13875 0a2cf760c6936f2f792debd03b396de7 73 Pfam PF03717 Penicillin-binding Protein dimerisation domain 8 64 1.8E-14 T 25-04-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLFO_RS13875 0a2cf760c6936f2f792debd03b396de7 73 SUPERFAMILY SSF56519 5 64 2.75E-9 T 25-04-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLFO_RS08250 bf56c8195112fb1c5b5e6958957af684 282 Pfam PF12833 Helix-turn-helix domain 202 278 1.4E-22 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS08250 bf56c8195112fb1c5b5e6958957af684 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS08250 bf56c8195112fb1c5b5e6958957af684 282 SUPERFAMILY SSF46689 177 228 3.05E-8 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS08250 bf56c8195112fb1c5b5e6958957af684 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 6.7E-6 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS08250 bf56c8195112fb1c5b5e6958957af684 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 6.7E-6 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS08250 bf56c8195112fb1c5b5e6958957af684 282 SUPERFAMILY SSF51215 25 160 1.16E-15 T 25-04-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLFO_RS08250 bf56c8195112fb1c5b5e6958957af684 282 SMART SM00342 194 277 4.3E-30 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS08250 bf56c8195112fb1c5b5e6958957af684 282 Pfam PF02311 AraC-like ligand binding domain 29 155 1.0E-9 T 25-04-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLFO_RS08250 bf56c8195112fb1c5b5e6958957af684 282 Gene3D G3DSA:2.60.120.280 8 160 3.4E-15 T 25-04-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CLFO_RS08250 bf56c8195112fb1c5b5e6958957af684 282 Gene3D G3DSA:1.10.10.60 231 280 1.1E-18 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS08250 bf56c8195112fb1c5b5e6958957af684 282 SUPERFAMILY SSF46689 230 279 3.81E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS08250 bf56c8195112fb1c5b5e6958957af684 282 Gene3D G3DSA:1.10.10.60 171 230 1.5E-18 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS11855 d88464ff8bf8410c7913e5acf1ad23db 217 Gene3D G3DSA:3.40.50.1000 73 207 5.7E-13 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS11855 d88464ff8bf8410c7913e5acf1ad23db 217 Gene3D G3DSA:3.40.50.1000 3 23 5.7E-13 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS11855 d88464ff8bf8410c7913e5acf1ad23db 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 7 177 1.5E-26 T 25-04-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CLFO_RS11855 d88464ff8bf8410c7913e5acf1ad23db 217 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 7 184 1.4E-36 T 25-04-2017 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 CLFO_RS11855 d88464ff8bf8410c7913e5acf1ad23db 217 SUPERFAMILY SSF56784 7 211 3.74E-44 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS11855 d88464ff8bf8410c7913e5acf1ad23db 217 Pfam PF06888 Putative Phosphatase 7 184 7.7E-15 T 25-04-2017 IPR016965 Phosphatase PHOSPHO-type GO:0016791 CLFO_RS06395 872945c5cb242944236df2e4e5cf4028 328 Gene3D G3DSA:3.40.190.10 37 118 1.4E-56 T 25-04-2017 CLFO_RS06395 872945c5cb242944236df2e4e5cf4028 328 Gene3D G3DSA:3.40.190.10 260 326 1.4E-56 T 25-04-2017 CLFO_RS06395 872945c5cb242944236df2e4e5cf4028 328 Gene3D G3DSA:3.40.190.10 127 259 4.7E-44 T 25-04-2017 CLFO_RS06395 872945c5cb242944236df2e4e5cf4028 328 Pfam PF16868 NMT1-like family 42 326 1.9E-98 T 25-04-2017 IPR011852 TRAP transporter solute receptor, TAXI family CLFO_RS06395 872945c5cb242944236df2e4e5cf4028 328 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 12 326 4.0E-121 T 25-04-2017 IPR011852 TRAP transporter solute receptor, TAXI family CLFO_RS06395 872945c5cb242944236df2e4e5cf4028 328 SUPERFAMILY SSF53850 37 325 1.63E-83 T 25-04-2017 CLFO_RS18370 c27cc40bcaf9cbf2a5927416dca567c9 277 SUPERFAMILY SSF161098 71 260 9.29E-26 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS18370 c27cc40bcaf9cbf2a5927416dca567c9 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 274 3.1E-28 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS18370 c27cc40bcaf9cbf2a5927416dca567c9 277 Gene3D G3DSA:1.10.3720.10 70 273 6.2E-25 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS18370 c27cc40bcaf9cbf2a5927416dca567c9 277 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 11 53 5.1E-7 T 25-04-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLFO_RS18370 c27cc40bcaf9cbf2a5927416dca567c9 277 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 18 272 9.3E-114 T 25-04-2017 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 CLFO_RS18535 2b239a544b8646779191cad2e45d1292 162 SMART SM00260 14 150 8.5E-36 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS18535 2b239a544b8646779191cad2e45d1292 162 Gene3D G3DSA:2.40.50.180 56 92 2.1E-9 T 25-04-2017 CLFO_RS18535 2b239a544b8646779191cad2e45d1292 162 SUPERFAMILY SSF50341 13 154 8.24E-38 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS18535 2b239a544b8646779191cad2e45d1292 162 Pfam PF01584 CheW-like domain 18 153 2.9E-34 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS18535 2b239a544b8646779191cad2e45d1292 162 Gene3D G3DSA:2.30.30.40 93 143 1.7E-11 T 25-04-2017 CLFO_RS02740 267faf601511db6cb9970e33c9d7ee7f 299 Gene3D G3DSA:3.40.50.300 1 228 8.4E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02740 267faf601511db6cb9970e33c9d7ee7f 299 SUPERFAMILY SSF52540 2 217 1.17E-48 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02740 267faf601511db6cb9970e33c9d7ee7f 299 SMART SM00382 26 203 1.8E-5 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS02740 267faf601511db6cb9970e33c9d7ee7f 299 Pfam PF00005 ABC transporter 17 154 1.0E-22 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 SUPERFAMILY SSF50156 251 349 4.58E-10 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 Pfam PF13180 PDZ domain 265 348 2.4E-7 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 PRINTS PR00834 HtrA/DegQ protease family signature 299 311 1.6E-28 T 25-04-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.6E-28 T 25-04-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 1.6E-28 T 25-04-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.6E-28 T 25-04-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 PRINTS PR00834 HtrA/DegQ protease family signature 163 187 1.6E-28 T 25-04-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 PRINTS PR00834 HtrA/DegQ protease family signature 197 214 1.6E-28 T 25-04-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 SUPERFAMILY SSF50494 53 269 4.75E-54 T 25-04-2017 IPR009003 Peptidase S1, PA clan CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 Gene3D G3DSA:2.40.10.10 157 264 2.3E-33 T 25-04-2017 CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 Gene3D G3DSA:2.40.10.10 44 156 5.5E-26 T 25-04-2017 CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 Gene3D G3DSA:2.30.42.10 265 354 2.0E-13 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS18165 6951794f8e80f4befd3a2102483d6aec 354 Pfam PF13365 Trypsin-like peptidase domain 93 226 6.0E-32 T 25-04-2017 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 ProSitePatterns PS01120 Urease nickel ligands signature. 132 145 - T 25-04-2017 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 Pfam PF01979 Amidohydrolase family 130 457 4.0E-75 T 25-04-2017 IPR006680 Amidohydrolase-related GO:0016787 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 571 5.9E-289 T 25-04-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 SUPERFAMILY SSF51338 413 483 5.61E-10 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 SUPERFAMILY SSF51338 4 182 5.14E-66 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 Hamap MF_01953 Urease subunit alpha [ureC]. 3 571 56.063 T 25-04-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 Gene3D G3DSA:2.30.40.10 70 141 2.3E-12 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 300 317 3.4E-32 T 25-04-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 431 444 3.4E-32 T 25-04-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 339 355 3.4E-32 T 25-04-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 405 420 3.4E-32 T 25-04-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 SUPERFAMILY SSF51556 135 435 3.93E-192 T 25-04-2017 IPR032466 Metal-dependent hydrolase CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 SUPERFAMILY SSF51556 484 571 3.93E-192 T 25-04-2017 IPR032466 Metal-dependent hydrolase CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 ProSitePatterns PS00145 Urease active site. 322 338 - T 25-04-2017 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 Gene3D G3DSA:3.20.20.140 142 433 3.3E-201 T 25-04-2017 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 Gene3D G3DSA:3.20.20.140 492 569 3.3E-201 T 25-04-2017 CLFO_RS05825 1ff912bb93760907ea4507110421c41c 571 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 124 1.3E-56 T 25-04-2017 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS14705 5f2589d35fb1419611e0da536e85d03c 466 SUPERFAMILY SSF51556 3 464 7.71E-169 T 25-04-2017 IPR032466 Metal-dependent hydrolase CLFO_RS14705 5f2589d35fb1419611e0da536e85d03c 466 Gene3D G3DSA:3.20.20.140 138 465 1.2E-144 T 25-04-2017 CLFO_RS14705 5f2589d35fb1419611e0da536e85d03c 466 Gene3D G3DSA:3.20.20.140 3 44 1.2E-144 T 25-04-2017 CLFO_RS14705 5f2589d35fb1419611e0da536e85d03c 466 Hamap MF_00675 Uronate isomerase [uxaC]. 2 466 46.937 T 25-04-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CLFO_RS14705 5f2589d35fb1419611e0da536e85d03c 466 Gene3D G3DSA:1.10.2020.10 46 135 7.6E-39 T 25-04-2017 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CLFO_RS14705 5f2589d35fb1419611e0da536e85d03c 466 Pfam PF02614 Glucuronate isomerase 1 464 7.8E-206 T 25-04-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CLFO_RS00835 fe3765fd2be6de41e8c8855a2b4d8140 202 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 202 53.099 T 25-04-2017 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CLFO_RS00835 fe3765fd2be6de41e8c8855a2b4d8140 202 SUPERFAMILY SSF53850 1 199 3.26E-65 T 25-04-2017 CLFO_RS00835 fe3765fd2be6de41e8c8855a2b4d8140 202 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 1 177 1.4E-63 T 25-04-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CLFO_RS00835 fe3765fd2be6de41e8c8855a2b4d8140 202 Gene3D G3DSA:3.40.190.10 1 109 2.2E-38 T 25-04-2017 CLFO_RS00835 fe3765fd2be6de41e8c8855a2b4d8140 202 Gene3D G3DSA:3.40.190.10 110 170 8.4E-30 T 25-04-2017 CLFO_RS00835 fe3765fd2be6de41e8c8855a2b4d8140 202 Pfam PF01634 ATP phosphoribosyltransferase 48 197 1.2E-53 T 25-04-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CLFO_RS00835 fe3765fd2be6de41e8c8855a2b4d8140 202 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 137 158 - T 25-04-2017 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CLFO_RS10740 a4a751afe4469283c33bff3e1af5f0d7 432 Pfam PF01336 OB-fold nucleic acid binding domain 18 97 5.9E-13 T 25-04-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLFO_RS10740 a4a751afe4469283c33bff3e1af5f0d7 432 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 3 432 42.143 T 25-04-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CLFO_RS10740 a4a751afe4469283c33bff3e1af5f0d7 432 Gene3D G3DSA:3.30.930.10 104 430 1.4E-116 T 25-04-2017 CLFO_RS10740 a4a751afe4469283c33bff3e1af5f0d7 432 Gene3D G3DSA:2.40.50.140 3 98 1.4E-23 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10740 a4a751afe4469283c33bff3e1af5f0d7 432 SUPERFAMILY SSF55681 100 431 6.01E-96 T 25-04-2017 CLFO_RS10740 a4a751afe4469283c33bff3e1af5f0d7 432 Pfam PF00152 tRNA synthetases class II (D, K and N) 114 426 2.3E-84 T 25-04-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS10740 a4a751afe4469283c33bff3e1af5f0d7 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 199 212 1.0E-15 T 25-04-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS10740 a4a751afe4469283c33bff3e1af5f0d7 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 183 195 1.0E-15 T 25-04-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS10740 a4a751afe4469283c33bff3e1af5f0d7 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 387 401 1.0E-15 T 25-04-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS10740 a4a751afe4469283c33bff3e1af5f0d7 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 347 363 1.0E-15 T 25-04-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS10740 a4a751afe4469283c33bff3e1af5f0d7 432 SUPERFAMILY SSF50249 4 101 2.1E-23 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10740 a4a751afe4469283c33bff3e1af5f0d7 432 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 2 431 5.6E-158 T 25-04-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CLFO_RS19670 6ba036706352cf4b12292c33751e15d2 147 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 25-04-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19670 6ba036706352cf4b12292c33751e15d2 147 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.3E-51 T 25-04-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19670 6ba036706352cf4b12292c33751e15d2 147 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 25-04-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19670 6ba036706352cf4b12292c33751e15d2 147 Gene3D G3DSA:3.90.1170.10 22 138 8.6E-58 T 25-04-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19670 6ba036706352cf4b12292c33751e15d2 147 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.0E-60 T 25-04-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19670 6ba036706352cf4b12292c33751e15d2 147 SUPERFAMILY SSF54686 1 138 5.23E-60 T 25-04-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19670 6ba036706352cf4b12292c33751e15d2 147 PRINTS PR00060 Ribosomal protein L16 signature 58 87 7.8E-39 T 25-04-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19670 6ba036706352cf4b12292c33751e15d2 147 PRINTS PR00060 Ribosomal protein L16 signature 24 36 7.8E-39 T 25-04-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19670 6ba036706352cf4b12292c33751e15d2 147 PRINTS PR00060 Ribosomal protein L16 signature 88 117 7.8E-39 T 25-04-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19670 6ba036706352cf4b12292c33751e15d2 147 PRINTS PR00060 Ribosomal protein L16 signature 42 53 7.8E-39 T 25-04-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19670 6ba036706352cf4b12292c33751e15d2 147 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 40.867 T 25-04-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 504 513 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 SMART SM00382 310 454 5.4E-9 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 377 392 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 Gene3D G3DSA:1.10.8.60 464 538 9.8E-19 T 25-04-2017 CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 Pfam PF00158 Sigma-54 interaction domain 292 458 3.8E-67 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 578 598 5.6E-8 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 561 578 5.6E-8 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 Gene3D G3DSA:1.10.10.60 545 597 2.8E-15 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 SUPERFAMILY SSF52540 291 534 3.43E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 314 327 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 Pfam PF02954 Bacterial regulatory protein, Fis family 557 595 6.6E-13 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 Gene3D G3DSA:3.40.50.300 288 463 3.1E-56 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03375 d08fc77882422a7a1aad88c4c23abf93 600 SUPERFAMILY SSF46689 504 597 1.58E-12 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS18825 71560acc2f79b09150aa64125cbfd00c 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 41.154 T 25-04-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CLFO_RS18825 71560acc2f79b09150aa64125cbfd00c 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 4.1E-250 T 25-04-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CLFO_RS18825 71560acc2f79b09150aa64125cbfd00c 608 SUPERFAMILY SSF56235 2 234 3.26E-77 T 25-04-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CLFO_RS18825 71560acc2f79b09150aa64125cbfd00c 608 SUPERFAMILY SSF53697 244 608 8.54E-108 T 25-04-2017 CLFO_RS18825 71560acc2f79b09150aa64125cbfd00c 608 Gene3D G3DSA:3.60.20.10 2 239 5.3E-82 T 25-04-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CLFO_RS18825 71560acc2f79b09150aa64125cbfd00c 608 Pfam PF01380 SIS domain 464 590 8.4E-25 T 25-04-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 CLFO_RS18825 71560acc2f79b09150aa64125cbfd00c 608 Pfam PF01380 SIS domain 289 415 4.0E-32 T 25-04-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 CLFO_RS18825 71560acc2f79b09150aa64125cbfd00c 608 Pfam PF13522 Glutamine amidotransferase domain 63 191 3.8E-21 T 25-04-2017 CLFO_RS18825 71560acc2f79b09150aa64125cbfd00c 608 Gene3D G3DSA:3.40.50.10490 445 608 2.9E-59 T 25-04-2017 CLFO_RS18825 71560acc2f79b09150aa64125cbfd00c 608 Gene3D G3DSA:3.40.50.10490 243 444 3.4E-69 T 25-04-2017 CLFO_RS01800 23f3a9e100e96f7d488fe9431771ac23 255 SUPERFAMILY SSF52172 5 125 9.39E-30 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS01800 23f3a9e100e96f7d488fe9431771ac23 255 SMART SM00850 157 255 8.2E-33 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS01800 23f3a9e100e96f7d488fe9431771ac23 255 Gene3D G3DSA:2.40.50.40 150 217 2.8E-22 T 25-04-2017 CLFO_RS01800 23f3a9e100e96f7d488fe9431771ac23 255 Pfam PF00072 Response regulator receiver domain 5 113 2.2E-24 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS01800 23f3a9e100e96f7d488fe9431771ac23 255 Gene3D G3DSA:2.20.25.10 225 254 5.4E-6 T 25-04-2017 CLFO_RS01800 23f3a9e100e96f7d488fe9431771ac23 255 SMART SM00448 2 113 1.6E-25 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS01800 23f3a9e100e96f7d488fe9431771ac23 255 Gene3D G3DSA:3.40.50.2300 5 121 3.4E-31 T 25-04-2017 CLFO_RS01800 23f3a9e100e96f7d488fe9431771ac23 255 Pfam PF04397 LytTr DNA-binding domain 158 254 1.5E-28 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 SUPERFAMILY SSF56784 511 530 3.57E-60 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 SUPERFAMILY SSF56784 569 811 3.57E-60 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 SUPERFAMILY SSF55008 3 75 1.2E-21 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 SUPERFAMILY SSF81665 760 790 6.93E-9 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 SUPERFAMILY SSF81665 392 506 6.93E-9 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 SUPERFAMILY SSF81665 247 295 6.93E-9 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 9 72 1.4E-12 T 25-04-2017 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 83 147 1.4E-12 T 25-04-2017 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 231 813 5.5E-188 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 Pfam PF00702 haloacid dehalogenase-like hydrolase 508 725 1.5E-44 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 264 427 3.1E-23 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 455 799 6.2E-68 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 SUPERFAMILY SSF55008 79 151 1.96E-20 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 647 4.4E-30 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 658 668 4.4E-30 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 526 4.4E-30 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 711 730 4.4E-30 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 341 355 4.4E-30 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 734 746 4.4E-30 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 ProSitePatterns PS01047 Heavy-metal-associated domain. 88 117 - T 25-04-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 Gene3D G3DSA:2.70.150.10 256 392 2.1E-32 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 Gene3D G3DSA:3.40.1110.10 526 638 5.5E-27 T 25-04-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 514 520 - T 25-04-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 Gene3D G3DSA:3.30.70.100 3 72 1.7E-23 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 Gene3D G3DSA:3.30.70.100 78 148 8.1E-23 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 Pfam PF00122 E1-E2 ATPase 263 503 1.5E-65 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 PRINTS PR00941 Cadmium-transporting ATPase signature 97 118 9.7E-14 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 PRINTS PR00941 Cadmium-transporting ATPase signature 376 390 9.7E-14 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 PRINTS PR00941 Cadmium-transporting ATPase signature 276 296 9.7E-14 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 PRINTS PR00941 Cadmium-transporting ATPase signature 12 21 9.7E-14 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 PRINTS PR00941 Cadmium-transporting ATPase signature 357 373 9.7E-14 T 25-04-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 Gene3D G3DSA:3.40.50.1000 639 779 3.8E-53 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 Gene3D G3DSA:3.40.50.1000 483 525 3.8E-53 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 SUPERFAMILY SSF81653 295 391 1.15E-27 T 25-04-2017 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 Pfam PF00403 Heavy-metal-associated domain 85 146 6.5E-17 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS13580 fbb0d5057c89a475580c91a3ae5a9e09 825 Pfam PF00403 Heavy-metal-associated domain 12 72 6.2E-15 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS14900 b4226efc3b3de9b76d1bf41538014b7c 129 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 117 6.3E-52 T 25-04-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CLFO_RS14900 b4226efc3b3de9b76d1bf41538014b7c 129 SUPERFAMILY SSF50692 1 120 1.74E-50 T 25-04-2017 IPR009010 Aspartate decarboxylase-like domain CLFO_RS14900 b4226efc3b3de9b76d1bf41538014b7c 129 PIRSF PIRSF006246 1 128 3.7E-54 T 25-04-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CLFO_RS14900 b4226efc3b3de9b76d1bf41538014b7c 129 Pfam PF02261 Aspartate decarboxylase 1 114 4.3E-54 T 25-04-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CLFO_RS14900 b4226efc3b3de9b76d1bf41538014b7c 129 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 93 1.0E-36 T 25-04-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CLFO_RS14900 b4226efc3b3de9b76d1bf41538014b7c 129 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 69.771 T 25-04-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CLFO_RS14900 b4226efc3b3de9b76d1bf41538014b7c 129 Gene3D G3DSA:2.40.40.20 1 120 1.8E-56 T 25-04-2017 CLFO_RS09290 b004ee18751f4568add76ff6e816015e 138 SMART SM00732 2 102 9.2E-43 T 25-04-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 CLFO_RS09290 b004ee18751f4568add76ff6e816015e 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 137 27.277 T 25-04-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CLFO_RS09290 b004ee18751f4568add76ff6e816015e 138 SUPERFAMILY SSF53098 2 136 1.52E-46 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS09290 b004ee18751f4568add76ff6e816015e 138 Gene3D G3DSA:3.30.420.140 2 136 3.8E-54 T 25-04-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 CLFO_RS09290 b004ee18751f4568add76ff6e816015e 138 Pfam PF03652 Holliday junction resolvase 3 135 2.2E-48 T 25-04-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CLFO_RS09290 b004ee18751f4568add76ff6e816015e 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 134 1.2E-47 T 25-04-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CLFO_RS20520 661a2c9a0bba6bc5497036beb31e8d99 470 Gene3D G3DSA:3.50.50.60 127 271 1.4E-22 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS20520 661a2c9a0bba6bc5497036beb31e8d99 470 Gene3D G3DSA:3.50.50.60 2 91 1.4E-22 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS20520 661a2c9a0bba6bc5497036beb31e8d99 470 Gene3D G3DSA:3.50.50.60 400 465 1.2E-9 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS20520 661a2c9a0bba6bc5497036beb31e8d99 470 SUPERFAMILY SSF51905 2 113 2.35E-32 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS20520 661a2c9a0bba6bc5497036beb31e8d99 470 SUPERFAMILY SSF51905 146 247 2.35E-32 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS20520 661a2c9a0bba6bc5497036beb31e8d99 470 SUPERFAMILY SSF51905 417 465 2.35E-32 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS20520 661a2c9a0bba6bc5497036beb31e8d99 470 Pfam PF01266 FAD dependent oxidoreductase 4 213 1.1E-8 T 25-04-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CLFO_RS20825 064d47501fee5628779b7a861b535fa7 571 Pfam PF00920 Dehydratase family 29 567 4.4E-181 T 25-04-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS20825 064d47501fee5628779b7a861b535fa7 571 SUPERFAMILY SSF52016 383 570 3.3E-48 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS20825 064d47501fee5628779b7a861b535fa7 571 SUPERFAMILY SSF143975 10 380 1.96E-118 T 25-04-2017 CLFO_RS20825 064d47501fee5628779b7a861b535fa7 571 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 117 127 - T 25-04-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS20825 064d47501fee5628779b7a861b535fa7 571 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 469 480 - T 25-04-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS02645 240e9f5d8b982338782a83f85314908c 132 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 10 126 8.4E-29 T 25-04-2017 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CLFO_RS02645 240e9f5d8b982338782a83f85314908c 132 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 9 128 7.9E-38 T 25-04-2017 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 CLFO_RS02645 240e9f5d8b982338782a83f85314908c 132 SUPERFAMILY SSF81593 5 127 3.92E-36 T 25-04-2017 CLFO_RS02645 240e9f5d8b982338782a83f85314908c 132 Gene3D G3DSA:1.20.120.330 5 126 3.4E-43 T 25-04-2017 CLFO_RS09100 9bf348487de4f1c45e5ecb9944f9b488 145 SUPERFAMILY SSF46966 20 136 5.9E-5 T 25-04-2017 CLFO_RS09100 9bf348487de4f1c45e5ecb9944f9b488 145 Gene3D G3DSA:1.20.5.170 101 139 4.6E-5 T 25-04-2017 CLFO_RS15385 e1b9537f11ac9e7c7331abdaa3d45cd5 237 SMART SM00448 5 115 3.8E-45 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15385 e1b9537f11ac9e7c7331abdaa3d45cd5 237 Gene3D G3DSA:3.40.50.2300 6 124 2.5E-40 T 25-04-2017 CLFO_RS15385 e1b9537f11ac9e7c7331abdaa3d45cd5 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 2.0E-27 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS15385 e1b9537f11ac9e7c7331abdaa3d45cd5 237 Pfam PF00072 Response regulator receiver domain 7 116 3.6E-29 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15385 e1b9537f11ac9e7c7331abdaa3d45cd5 237 Gene3D G3DSA:1.10.10.10 133 228 1.1E-34 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15385 e1b9537f11ac9e7c7331abdaa3d45cd5 237 SUPERFAMILY SSF46894 132 226 5.26E-29 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS15385 e1b9537f11ac9e7c7331abdaa3d45cd5 237 SUPERFAMILY SSF52172 6 124 1.21E-40 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS15385 e1b9537f11ac9e7c7331abdaa3d45cd5 237 SMART SM00862 151 225 5.4E-28 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS19800 254e06e6c5541ff0a91b03d306135b1d 252 SMART SM00967 8 83 7.5E-24 T 25-04-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CLFO_RS19800 254e06e6c5541ff0a91b03d306135b1d 252 SUPERFAMILY SSF55315 8 79 1.34E-18 T 25-04-2017 IPR029064 50S ribosomal protein L30e-like CLFO_RS19800 254e06e6c5541ff0a91b03d306135b1d 252 Gene3D G3DSA:3.30.1330.30 6 78 4.5E-22 T 25-04-2017 IPR029064 50S ribosomal protein L30e-like CLFO_RS19800 254e06e6c5541ff0a91b03d306135b1d 252 Gene3D G3DSA:3.40.1280.10 94 248 1.3E-55 T 25-04-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLFO_RS19800 254e06e6c5541ff0a91b03d306135b1d 252 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 7 246 1.2E-81 T 25-04-2017 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 CLFO_RS19800 254e06e6c5541ff0a91b03d306135b1d 252 SUPERFAMILY SSF75217 71 248 9.81E-51 T 25-04-2017 IPR029028 Alpha/beta knot methyltransferases CLFO_RS19800 254e06e6c5541ff0a91b03d306135b1d 252 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 9 82 5.9E-24 T 25-04-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CLFO_RS19800 254e06e6c5541ff0a91b03d306135b1d 252 Pfam PF00588 SpoU rRNA Methylase family 100 240 1.3E-40 T 25-04-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CLFO_RS06430 b98aca28708902468502ec33aa0b8e00 225 SMART SM00448 1 112 3.8E-44 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS06430 b98aca28708902468502ec33aa0b8e00 225 SUPERFAMILY SSF52172 1 118 2.42E-40 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS06430 b98aca28708902468502ec33aa0b8e00 225 SMART SM00862 146 221 3.4E-15 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS06430 b98aca28708902468502ec33aa0b8e00 225 SUPERFAMILY SSF46894 123 222 7.94E-24 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS06430 b98aca28708902468502ec33aa0b8e00 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 2.9E-17 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS06430 b98aca28708902468502ec33aa0b8e00 225 Pfam PF00072 Response regulator receiver domain 3 113 3.6E-30 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS06430 b98aca28708902468502ec33aa0b8e00 225 Gene3D G3DSA:1.10.10.10 125 222 2.0E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06430 b98aca28708902468502ec33aa0b8e00 225 Gene3D G3DSA:3.40.50.2300 1 119 2.2E-39 T 25-04-2017 CLFO_RS15725 4ea0b02431607ea640be005f92fdfdbd 120 SMART SM00530 6 61 1.3E-17 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS15725 4ea0b02431607ea640be005f92fdfdbd 120 Gene3D G3DSA:1.10.260.40 1 65 1.1E-25 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS15725 4ea0b02431607ea640be005f92fdfdbd 120 SUPERFAMILY SSF47413 1 68 7.51E-20 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS15725 4ea0b02431607ea640be005f92fdfdbd 120 Pfam PF01381 Helix-turn-helix 7 61 9.3E-17 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS06415 6fce6d81a5878a76494a08f8ab8ebd72 246 SUPERFAMILY SSF50891 92 218 1.97E-44 T 25-04-2017 IPR029000 Cyclophilin-like domain CLFO_RS06415 6fce6d81a5878a76494a08f8ab8ebd72 246 Gene3D G3DSA:3.30.1360.40 5 83 1.6E-17 T 25-04-2017 IPR024946 Arginine repressor C-terminal-like domain CLFO_RS06415 6fce6d81a5878a76494a08f8ab8ebd72 246 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 8 213 4.1E-65 T 25-04-2017 IPR010016 KipI family CLFO_RS06415 6fce6d81a5878a76494a08f8ab8ebd72 246 SUPERFAMILY SSF160467 5 95 4.71E-15 T 25-04-2017 CLFO_RS06415 6fce6d81a5878a76494a08f8ab8ebd72 246 SMART SM00796 2 205 2.8E-90 T 25-04-2017 IPR003833 Carboxyltransferase domain, subdomain C and D CLFO_RS06415 6fce6d81a5878a76494a08f8ab8ebd72 246 Gene3D G3DSA:2.40.100.10 92 228 3.8E-50 T 25-04-2017 IPR029000 Cyclophilin-like domain CLFO_RS06415 6fce6d81a5878a76494a08f8ab8ebd72 246 Pfam PF02682 Allophanate hydrolase subunit 1 5 205 8.5E-71 T 25-04-2017 IPR003833 Carboxyltransferase domain, subdomain C and D CLFO_RS12690 e8f43d7592521ab09a4a6e92aa24add1 360 SUPERFAMILY SSF52540 126 176 4.02E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12690 e8f43d7592521ab09a4a6e92aa24add1 360 SUPERFAMILY SSF52540 21 70 4.02E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12690 e8f43d7592521ab09a4a6e92aa24add1 360 SUPERFAMILY SSF52540 302 352 2.18E-6 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12690 e8f43d7592521ab09a4a6e92aa24add1 360 SUPERFAMILY SSF52540 220 273 2.18E-6 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12690 e8f43d7592521ab09a4a6e92aa24add1 360 SUPERFAMILY SSF52540 221 256 2.35E-6 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12690 e8f43d7592521ab09a4a6e92aa24add1 360 Gene3D G3DSA:3.40.50.300 23 86 2.8E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12690 e8f43d7592521ab09a4a6e92aa24add1 360 Gene3D G3DSA:3.40.50.300 118 178 2.8E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12690 e8f43d7592521ab09a4a6e92aa24add1 360 Gene3D G3DSA:3.40.50.300 208 274 4.3E-6 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16045 aef6f555935bc6ab1a1fde876b0d79b4 236 SUPERFAMILY SSF52540 2 207 1.85E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16045 aef6f555935bc6ab1a1fde876b0d79b4 236 Gene3D G3DSA:3.40.50.300 2 193 1.3E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16045 aef6f555935bc6ab1a1fde876b0d79b4 236 SMART SM00382 27 195 2.6E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS16045 aef6f555935bc6ab1a1fde876b0d79b4 236 Pfam PF00005 ABC transporter 19 144 2.3E-31 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS10045 25c4613162d727f9e9b5df739634ad81 249 Gene3D G3DSA:3.40.50.1950 19 173 6.7E-15 T 25-04-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CLFO_RS10045 25c4613162d727f9e9b5df739634ad81 249 Pfam PF02441 Flavoprotein 21 131 3.1E-9 T 25-04-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CLFO_RS10045 25c4613162d727f9e9b5df739634ad81 249 SUPERFAMILY SSF52507 19 142 4.06E-12 T 25-04-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CLFO_RS05330 60c89e3584e3bc4a4df2ea749282a54d 278 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 25-04-2017 IPR000150 Cof protein GO:0016787 CLFO_RS05330 60c89e3584e3bc4a4df2ea749282a54d 278 Gene3D G3DSA:3.30.1240.10 135 187 1.4E-5 T 25-04-2017 CLFO_RS05330 60c89e3584e3bc4a4df2ea749282a54d 278 Gene3D G3DSA:3.30.1240.10 84 128 7.6E-4 T 25-04-2017 CLFO_RS05330 60c89e3584e3bc4a4df2ea749282a54d 278 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 268 9.9E-62 T 25-04-2017 IPR000150 Cof protein GO:0016787 CLFO_RS05330 60c89e3584e3bc4a4df2ea749282a54d 278 Gene3D G3DSA:3.40.50.1000 1 73 5.8E-52 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS05330 60c89e3584e3bc4a4df2ea749282a54d 278 Gene3D G3DSA:3.40.50.1000 188 273 5.8E-52 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS05330 60c89e3584e3bc4a4df2ea749282a54d 278 SUPERFAMILY SSF56784 1 272 6.75E-72 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS05330 60c89e3584e3bc4a4df2ea749282a54d 278 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 268 1.1E-66 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS05330 60c89e3584e3bc4a4df2ea749282a54d 278 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 241 2.7E-28 T 25-04-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CLFO_RS08270 95681f24aa218bf210e5623acfcf96fc 131 Gene3D G3DSA:3.40.50.720 6 128 2.2E-37 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS08270 95681f24aa218bf210e5623acfcf96fc 131 SMART SM00881 11 103 3.2E-16 T 25-04-2017 IPR003781 CoA-binding GO:0048037 CLFO_RS08270 95681f24aa218bf210e5623acfcf96fc 131 SUPERFAMILY SSF51735 8 128 9.31E-34 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS08270 95681f24aa218bf210e5623acfcf96fc 131 Pfam PF13380 CoA binding domain 15 129 4.2E-32 T 25-04-2017 IPR003781 CoA-binding GO:0048037 CLFO_RS17705 dd16c2aa6f22946cedaeee01ab0bc7ce 228 SUPERFAMILY SSF52540 1 220 9.69E-74 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17705 dd16c2aa6f22946cedaeee01ab0bc7ce 228 SMART SM00382 27 214 1.4E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS17705 dd16c2aa6f22946cedaeee01ab0bc7ce 228 Pfam PF00005 ABC transporter 18 165 3.0E-39 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS17705 dd16c2aa6f22946cedaeee01ab0bc7ce 228 Gene3D G3DSA:3.40.50.300 1 219 3.8E-74 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17705 dd16c2aa6f22946cedaeee01ab0bc7ce 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 5.2E-91 T 25-04-2017 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CLFO_RS17705 dd16c2aa6f22946cedaeee01ab0bc7ce 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS05345 2fe1367a9db2582e9329cff1ea305f92 283 Gene3D G3DSA:3.30.1180.10 155 280 1.4E-33 T 25-04-2017 CLFO_RS05345 2fe1367a9db2582e9329cff1ea305f92 283 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 280 8.6E-89 T 25-04-2017 IPR003797 DegV CLFO_RS05345 2fe1367a9db2582e9329cff1ea305f92 283 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 280 3.9E-81 T 25-04-2017 IPR003797 DegV CLFO_RS05345 2fe1367a9db2582e9329cff1ea305f92 283 Gene3D G3DSA:3.40.50.10170 4 152 3.3E-47 T 25-04-2017 CLFO_RS05345 2fe1367a9db2582e9329cff1ea305f92 283 SUPERFAMILY SSF82549 4 282 8.89E-78 T 25-04-2017 CLFO_RS15935 8bc3732107bce37e86475c53fba5dc82 519 Gene3D G3DSA:3.40.190.10 143 283 3.2E-33 T 25-04-2017 CLFO_RS15935 8bc3732107bce37e86475c53fba5dc82 519 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 439 5.5E-72 T 25-04-2017 IPR000914 Solute-binding protein family 5 domain CLFO_RS15935 8bc3732107bce37e86475c53fba5dc82 519 PIRSF PIRSF002741 1 519 2.9E-82 T 25-04-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLFO_RS15935 8bc3732107bce37e86475c53fba5dc82 519 SUPERFAMILY SSF53850 41 512 2.17E-106 T 25-04-2017 CLFO_RS15935 8bc3732107bce37e86475c53fba5dc82 519 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 25-04-2017 IPR023765 Solute-binding protein family 5, conserved site CLFO_RS15935 8bc3732107bce37e86475c53fba5dc82 519 Gene3D G3DSA:3.10.105.10 284 489 1.3E-49 T 25-04-2017 CLFO_RS10060 155fe078f720a7954ac9469542668372 147 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 54 9.0E-11 T 25-04-2017 CLFO_RS10060 155fe078f720a7954ac9469542668372 147 SMART SM00877 4 80 1.6E-28 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS10060 155fe078f720a7954ac9469542668372 147 SUPERFAMILY SSF143414 4 96 1.01E-26 T 25-04-2017 CLFO_RS10060 155fe078f720a7954ac9469542668372 147 Pfam PF00936 BMC domain 5 80 2.0E-23 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS00025 326c322dba3a6e512a670163887ae11c 99 Pfam PF04025 Domain of unknown function (DUF370) 2 88 6.1E-7 T 25-04-2017 IPR007169 Uncharacterised protein family UPF0296 CLFO_RS03265 267536259d7fc7c24c4b302b5bcdba2a 504 Pfam PF04324 BFD-like [2Fe-2S] binding domain 398 452 1.5E-16 T 25-04-2017 IPR007419 BFD-like [2Fe-2S]-binding domain CLFO_RS03265 267536259d7fc7c24c4b302b5bcdba2a 504 Gene3D G3DSA:3.50.50.60 314 356 2.8E-42 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS03265 267536259d7fc7c24c4b302b5bcdba2a 504 Gene3D G3DSA:3.50.50.60 1 82 2.8E-42 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS03265 267536259d7fc7c24c4b302b5bcdba2a 504 Gene3D G3DSA:3.50.50.60 139 216 2.8E-42 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS03265 267536259d7fc7c24c4b302b5bcdba2a 504 Pfam PF01266 FAD dependent oxidoreductase 3 352 2.7E-67 T 25-04-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CLFO_RS03265 267536259d7fc7c24c4b302b5bcdba2a 504 Gene3D G3DSA:3.30.9.10 217 273 1.5E-6 T 25-04-2017 CLFO_RS03265 267536259d7fc7c24c4b302b5bcdba2a 504 Gene3D G3DSA:3.30.9.10 85 138 1.5E-6 T 25-04-2017 CLFO_RS03265 267536259d7fc7c24c4b302b5bcdba2a 504 SUPERFAMILY SSF51905 1 217 1.6E-50 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS03265 267536259d7fc7c24c4b302b5bcdba2a 504 SUPERFAMILY SSF51905 314 401 1.6E-50 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS03265 267536259d7fc7c24c4b302b5bcdba2a 504 SUPERFAMILY SSF54373 218 311 1.39E-5 T 25-04-2017 CLFO_RS18640 acc4fc5aefe276fd345d0d04270d4647 324 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 310 4.3E-90 T 25-04-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CLFO_RS18640 acc4fc5aefe276fd345d0d04270d4647 324 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 42 285 3.6E-74 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS18640 acc4fc5aefe276fd345d0d04270d4647 324 PIRSF PIRSF006470 8 324 3.0E-104 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS06440 438a31ae52364fd7a3af99716ad4dfd0 227 Pfam PF16316 Domain of unknown function (DUF4956) 45 148 1.7E-14 T 25-04-2017 IPR032531 Protein of unknown function DUF4956 CLFO_RS19750 3750764d6a2d786ccbffd3f7805ea2e8 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 121 3.0E-49 T 25-04-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19750 3750764d6a2d786ccbffd3f7805ea2e8 121 Gene3D G3DSA:3.30.1390.10 50 121 2.3E-34 T 25-04-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLFO_RS19750 3750764d6a2d786ccbffd3f7805ea2e8 121 SUPERFAMILY SSF48300 1 57 1.26E-17 T 25-04-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19750 3750764d6a2d786ccbffd3f7805ea2e8 121 SUPERFAMILY SSF54736 50 121 2.79E-25 T 25-04-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLFO_RS19750 3750764d6a2d786ccbffd3f7805ea2e8 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 94 7.0E-12 T 25-04-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19750 3750764d6a2d786ccbffd3f7805ea2e8 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 121 25.506 T 25-04-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19750 3750764d6a2d786ccbffd3f7805ea2e8 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 2 48 3.1E-19 T 25-04-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19750 3750764d6a2d786ccbffd3f7805ea2e8 121 Gene3D G3DSA:1.20.5.710 1 49 7.7E-23 T 25-04-2017 CLFO_RS19750 3750764d6a2d786ccbffd3f7805ea2e8 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 2.3E-31 T 25-04-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS17210 68ce1abcdf9c9fb64941bc941113cba4 71 Pfam PF12728 Helix-turn-helix domain 7 54 2.2E-13 T 25-04-2017 CLFO_RS17210 68ce1abcdf9c9fb64941bc941113cba4 71 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 53 2.3E-9 T 25-04-2017 IPR010093 SinI-like, DNA-binding domain GO:0003677 CLFO_RS14425 528836706a9736d0802cf213a7f0040d 280 SUPERFAMILY SSF58104 113 278 1.31E-41 T 25-04-2017 CLFO_RS14425 528836706a9736d0802cf213a7f0040d 280 SMART SM00283 88 280 2.0E-4 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS14425 528836706a9736d0802cf213a7f0040d 280 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 156 273 1.6E-26 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS14425 528836706a9736d0802cf213a7f0040d 280 Gene3D G3DSA:1.10.287.950 114 278 3.0E-36 T 25-04-2017 CLFO_RS14425 528836706a9736d0802cf213a7f0040d 280 SUPERFAMILY SSF103190 28 117 3.81E-9 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS08630 f3ce911a3ba6fca47f1dcd6a5bbf91c7 466 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 8 461 5.3E-193 T 25-04-2017 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CLFO_RS08630 f3ce911a3ba6fca47f1dcd6a5bbf91c7 466 SUPERFAMILY SSF53383 77 464 3.16E-55 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS08630 f3ce911a3ba6fca47f1dcd6a5bbf91c7 466 Pfam PF03841 L-seryl-tRNA selenium transferase 86 448 2.9E-167 T 25-04-2017 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CLFO_RS08630 f3ce911a3ba6fca47f1dcd6a5bbf91c7 466 Gene3D G3DSA:3.40.640.10 85 324 2.7E-32 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS08630 f3ce911a3ba6fca47f1dcd6a5bbf91c7 466 Pfam PF12390 Selenocysteine synthase N terminal 7 46 2.9E-8 T 25-04-2017 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CLFO_RS08630 f3ce911a3ba6fca47f1dcd6a5bbf91c7 466 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 466 211.602 T 25-04-2017 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CLFO_RS20755 f9352005a72f1bcbdbda86e0171eff08 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 1 151 3.1E-25 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20755 f9352005a72f1bcbdbda86e0171eff08 165 Pfam PF08281 Sigma-70, region 4 95 147 2.9E-11 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20755 f9352005a72f1bcbdbda86e0171eff08 165 Pfam PF04542 Sigma-70 region 2 2 68 1.7E-13 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20755 f9352005a72f1bcbdbda86e0171eff08 165 Gene3D G3DSA:1.10.10.10 93 153 1.5E-16 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20755 f9352005a72f1bcbdbda86e0171eff08 165 SUPERFAMILY SSF88946 2 84 1.33E-19 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20755 f9352005a72f1bcbdbda86e0171eff08 165 Gene3D G3DSA:1.10.1740.10 2 87 4.0E-20 T 25-04-2017 CLFO_RS20755 f9352005a72f1bcbdbda86e0171eff08 165 SUPERFAMILY SSF88659 85 152 3.36E-13 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS05700 ab9b66aeefcf066f9b0dfa129d0eb5b2 290 Hamap MF_00206 Lipoyl synthase [lipA]. 1 289 132.108 T 25-04-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CLFO_RS05700 ab9b66aeefcf066f9b0dfa129d0eb5b2 290 SUPERFAMILY SSF102114 18 278 3.01E-59 T 25-04-2017 CLFO_RS05700 ab9b66aeefcf066f9b0dfa129d0eb5b2 290 SMART SM00729 51 258 6.5E-9 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS05700 ab9b66aeefcf066f9b0dfa129d0eb5b2 290 Pfam PF04055 Radical SAM superfamily 58 218 1.2E-13 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS05700 ab9b66aeefcf066f9b0dfa129d0eb5b2 290 Gene3D G3DSA:3.20.20.70 18 285 3.6E-64 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS05700 ab9b66aeefcf066f9b0dfa129d0eb5b2 290 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 287 8.4E-121 T 25-04-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CLFO_RS05700 ab9b66aeefcf066f9b0dfa129d0eb5b2 290 PIRSF PIRSF005963 1 290 6.4E-134 T 25-04-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CLFO_RS05040 2ded3eed7d244ee703ee3238d802b96c 406 SUPERFAMILY SSF53633 3 241 3.53E-69 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS05040 2ded3eed7d244ee703ee3238d802b96c 406 Pfam PF00696 Amino acid kinase family 3 229 1.1E-51 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS05040 2ded3eed7d244ee703ee3238d802b96c 406 SUPERFAMILY SSF55021 252 346 1.74E-13 T 25-04-2017 CLFO_RS05040 2ded3eed7d244ee703ee3238d802b96c 406 SUPERFAMILY SSF55021 334 403 1.86E-19 T 25-04-2017 CLFO_RS05040 2ded3eed7d244ee703ee3238d802b96c 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 25-04-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS05040 2ded3eed7d244ee703ee3238d802b96c 406 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 398 1.8E-123 T 25-04-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS05040 2ded3eed7d244ee703ee3238d802b96c 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 398 1.2E-107 T 25-04-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS05040 2ded3eed7d244ee703ee3238d802b96c 406 Gene3D G3DSA:3.40.1160.10 1 241 1.8E-67 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS05040 2ded3eed7d244ee703ee3238d802b96c 406 PIRSF PIRSF000726 57 406 2.2E-113 T 25-04-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS05040 2ded3eed7d244ee703ee3238d802b96c 406 Pfam PF13840 ACT domain 335 395 1.5E-9 T 25-04-2017 IPR027795 GATS-like ACT domain CLFO_RS09490 7eb9bbc92aff4a0b5316c181032a4726 272 SUPERFAMILY SSF161098 66 253 2.45E-19 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS09490 7eb9bbc92aff4a0b5316c181032a4726 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 270 1.2E-25 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS09490 7eb9bbc92aff4a0b5316c181032a4726 272 Gene3D G3DSA:1.10.3720.10 65 268 9.2E-17 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS09490 7eb9bbc92aff4a0b5316c181032a4726 272 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 2 41 1.2E-8 T 25-04-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLFO_RS05220 6797f12e77fcd0f327da8e70674c44ad 780 Gene3D G3DSA:3.40.50.300 31 93 4.7E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05220 6797f12e77fcd0f327da8e70674c44ad 780 Gene3D G3DSA:3.40.50.300 299 399 4.7E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05220 6797f12e77fcd0f327da8e70674c44ad 780 Pfam PF13654 AAA domain 26 539 6.2E-191 T 25-04-2017 CLFO_RS05220 6797f12e77fcd0f327da8e70674c44ad 780 SUPERFAMILY SSF54211 563 756 1.78E-33 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS05220 6797f12e77fcd0f327da8e70674c44ad 780 SUPERFAMILY SSF52540 308 540 4.17E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05220 6797f12e77fcd0f327da8e70674c44ad 780 SUPERFAMILY SSF52540 32 105 4.17E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05220 6797f12e77fcd0f327da8e70674c44ad 780 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 2.1E-11 T 25-04-2017 CLFO_RS05220 6797f12e77fcd0f327da8e70674c44ad 780 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 2.1E-11 T 25-04-2017 CLFO_RS05220 6797f12e77fcd0f327da8e70674c44ad 780 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 2.1E-11 T 25-04-2017 CLFO_RS05220 6797f12e77fcd0f327da8e70674c44ad 780 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 565 581 2.1E-11 T 25-04-2017 CLFO_RS05220 6797f12e77fcd0f327da8e70674c44ad 780 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 647 751 1.3E-9 T 25-04-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CLFO_RS05220 6797f12e77fcd0f327da8e70674c44ad 780 Gene3D G3DSA:3.30.230.10 558 754 1.7E-28 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS20195 4d15d422496ad0ec6f38425fb9cbe3da 262 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 16 262 9.0E-126 T 25-04-2017 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CLFO_RS20195 4d15d422496ad0ec6f38425fb9cbe3da 262 Gene3D G3DSA:3.40.50.300 18 256 3.7E-68 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20195 4d15d422496ad0ec6f38425fb9cbe3da 262 SUPERFAMILY SSF52540 8 249 1.45E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20195 4d15d422496ad0ec6f38425fb9cbe3da 262 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS20195 4d15d422496ad0ec6f38425fb9cbe3da 262 Pfam PF00005 ABC transporter 31 187 7.9E-34 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS20195 4d15d422496ad0ec6f38425fb9cbe3da 262 SMART SM00382 40 242 6.1E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04415 df4bc9168a324f12ce2814cf782b854e 79 Pfam PF07615 YKOF-related Family 4 73 1.8E-9 T 25-04-2017 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative CLFO_RS04415 df4bc9168a324f12ce2814cf782b854e 79 Gene3D G3DSA:3.30.70.930 2 75 7.3E-15 T 25-04-2017 IPR029756 MTH1187/YkoF-like CLFO_RS04415 df4bc9168a324f12ce2814cf782b854e 79 SUPERFAMILY SSF89957 2 77 5.1E-14 T 25-04-2017 IPR029756 MTH1187/YkoF-like CLFO_RS16810 cc2173e9e236d4b3de9b267fc8cdeacf 871 SUPERFAMILY SSF56059 1 342 1.88E-96 T 25-04-2017 CLFO_RS16810 cc2173e9e236d4b3de9b267fc8cdeacf 871 SUPERFAMILY SSF52009 765 869 1.83E-28 T 25-04-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLFO_RS16810 cc2173e9e236d4b3de9b267fc8cdeacf 871 Gene3D G3DSA:3.30.1490.20 1 185 1.5E-57 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS16810 cc2173e9e236d4b3de9b267fc8cdeacf 871 Gene3D G3DSA:3.50.30.10 765 868 5.1E-28 T 25-04-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLFO_RS16810 cc2173e9e236d4b3de9b267fc8cdeacf 871 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 316 2.5E-94 T 25-04-2017 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CLFO_RS16810 cc2173e9e236d4b3de9b267fc8cdeacf 871 Gene3D G3DSA:3.30.470.20 186 334 1.4E-50 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS16810 cc2173e9e236d4b3de9b267fc8cdeacf 871 Pfam PF00391 PEP-utilising enzyme, mobile domain 795 866 1.5E-22 T 25-04-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLFO_RS02715 5fdf757c81d8e1d9ac1b7d28addf052d 164 SUPERFAMILY SSF89963 93 164 3.4E-27 T 25-04-2017 IPR007551 Protein of unknown function DUF520 CLFO_RS02715 5fdf757c81d8e1d9ac1b7d28addf052d 164 Pfam PF04461 Protein of unknown function (DUF520) 6 164 5.1E-65 T 25-04-2017 IPR007551 Protein of unknown function DUF520 CLFO_RS02715 5fdf757c81d8e1d9ac1b7d28addf052d 164 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 5 164 26.433 T 25-04-2017 IPR007551 Protein of unknown function DUF520 CLFO_RS02715 5fdf757c81d8e1d9ac1b7d28addf052d 164 Gene3D G3DSA:3.30.70.990 13 98 4.9E-33 T 25-04-2017 CLFO_RS02715 5fdf757c81d8e1d9ac1b7d28addf052d 164 SUPERFAMILY SSF89963 7 90 1.15E-30 T 25-04-2017 IPR007551 Protein of unknown function DUF520 CLFO_RS02715 5fdf757c81d8e1d9ac1b7d28addf052d 164 Gene3D G3DSA:3.30.70.860 99 164 6.5E-31 T 25-04-2017 CLFO_RS16085 9ee3005abdacbe3d9a36d516ebf09136 163 Gene3D G3DSA:1.10.287.950 5 90 9.9E-4 T 25-04-2017 CLFO_RS01080 b24fc7ffa7afcaaa379f89180db55c1b 360 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 286 355 3.7E-19 T 25-04-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLFO_RS01080 b24fc7ffa7afcaaa379f89180db55c1b 360 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 25-04-2017 IPR019776 Flagellar basal body rod protein, conserved site CLFO_RS01080 b24fc7ffa7afcaaa379f89180db55c1b 360 Pfam PF00460 Flagella basal body rod protein 5 35 6.9E-13 T 25-04-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLFO_RS01080 b24fc7ffa7afcaaa379f89180db55c1b 360 SUPERFAMILY SSF117143 197 318 5.75E-24 T 25-04-2017 CLFO_RS01080 b24fc7ffa7afcaaa379f89180db55c1b 360 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 166 240 4.8E-26 T 25-04-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLFO_RS20355 7fb4dcaff92f8393249d2bfa0b20f54d 262 SMART SM00893 22 213 6.0E-54 T 25-04-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLFO_RS20355 7fb4dcaff92f8393249d2bfa0b20f54d 262 Pfam PF01012 Electron transfer flavoprotein domain 22 201 4.0E-45 T 25-04-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLFO_RS20355 7fb4dcaff92f8393249d2bfa0b20f54d 262 Gene3D G3DSA:3.40.50.620 1 260 1.8E-86 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS20355 7fb4dcaff92f8393249d2bfa0b20f54d 262 SUPERFAMILY SSF52402 1 257 1.88E-73 T 25-04-2017 CLFO_RS20355 7fb4dcaff92f8393249d2bfa0b20f54d 262 PIRSF PIRSF000090 1 262 1.8E-84 T 25-04-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 CLFO_RS05380 08dbfe34825f1c08483c0bb7833d4ce4 323 SUPERFAMILY SSF103473 14 268 1.31E-5 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS05380 08dbfe34825f1c08483c0bb7833d4ce4 323 Pfam PF02517 CAAX protease self-immunity 122 206 9.1E-18 T 25-04-2017 IPR003675 CAAX amino terminal protease GO:0016020 CLFO_RS14135 a8ed62dde9535a4649ce1281d8c3b509 397 Pfam PF01266 FAD dependent oxidoreductase 5 369 3.7E-61 T 25-04-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CLFO_RS14135 a8ed62dde9535a4649ce1281d8c3b509 397 Gene3D G3DSA:3.50.50.60 139 218 6.7E-58 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14135 a8ed62dde9535a4649ce1281d8c3b509 397 Gene3D G3DSA:3.50.50.60 3 81 6.7E-58 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14135 a8ed62dde9535a4649ce1281d8c3b509 397 Gene3D G3DSA:3.50.50.60 331 391 6.7E-58 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14135 a8ed62dde9535a4649ce1281d8c3b509 397 SUPERFAMILY SSF51905 331 388 3.63E-53 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14135 a8ed62dde9535a4649ce1281d8c3b509 397 SUPERFAMILY SSF51905 4 219 3.63E-53 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14135 a8ed62dde9535a4649ce1281d8c3b509 397 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 323 329 2.2E-8 T 25-04-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 CLFO_RS14135 a8ed62dde9535a4649ce1281d8c3b509 397 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 2.2E-8 T 25-04-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 CLFO_RS14135 a8ed62dde9535a4649ce1281d8c3b509 397 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 2.2E-8 T 25-04-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 CLFO_RS14135 a8ed62dde9535a4649ce1281d8c3b509 397 Gene3D G3DSA:3.30.9.10 219 329 1.3E-13 T 25-04-2017 CLFO_RS14135 a8ed62dde9535a4649ce1281d8c3b509 397 Gene3D G3DSA:3.30.9.10 85 138 1.3E-13 T 25-04-2017 CLFO_RS14135 a8ed62dde9535a4649ce1281d8c3b509 397 SUPERFAMILY SSF54373 270 329 5.1E-9 T 25-04-2017 CLFO_RS10465 f68de22c260cfdd6c1fcafac43410e68 469 Pfam PF04466 Phage terminase large subunit 85 452 5.8E-8 T 25-04-2017 IPR006437 Bacteriophage terminase, large subunit GO:0006323 CLFO_RS10465 f68de22c260cfdd6c1fcafac43410e68 469 SUPERFAMILY SSF52540 24 179 2.85E-9 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10465 f68de22c260cfdd6c1fcafac43410e68 469 Gene3D G3DSA:3.40.50.300 29 187 9.6E-6 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18570 38d0b6fdd1b27068c4b4ffa844673a4d 660 Pfam PF02743 Cache domain 36 262 1.0E-26 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS18570 38d0b6fdd1b27068c4b4ffa844673a4d 660 SMART SM00304 300 355 2.0E-4 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS18570 38d0b6fdd1b27068c4b4ffa844673a4d 660 SUPERFAMILY SSF103190 70 161 4.32E-5 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS18570 38d0b6fdd1b27068c4b4ffa844673a4d 660 SMART SM00283 384 659 7.3E-61 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS18570 38d0b6fdd1b27068c4b4ffa844673a4d 660 Gene3D G3DSA:1.10.287.950 399 617 4.0E-45 T 25-04-2017 CLFO_RS18570 38d0b6fdd1b27068c4b4ffa844673a4d 660 SUPERFAMILY SSF58104 390 659 2.62E-59 T 25-04-2017 CLFO_RS18570 38d0b6fdd1b27068c4b4ffa844673a4d 660 SUPERFAMILY SSF58104 331 357 2.62E-59 T 25-04-2017 CLFO_RS18570 38d0b6fdd1b27068c4b4ffa844673a4d 660 Gene3D G3DSA:3.30.450.20 76 153 2.1E-8 T 25-04-2017 CLFO_RS18570 38d0b6fdd1b27068c4b4ffa844673a4d 660 SUPERFAMILY SSF103190 181 258 7.85E-5 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS18570 38d0b6fdd1b27068c4b4ffa844673a4d 660 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 449 658 1.9E-37 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS18570 38d0b6fdd1b27068c4b4ffa844673a4d 660 Pfam PF00672 HAMP domain 281 352 8.7E-10 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS18570 38d0b6fdd1b27068c4b4ffa844673a4d 660 Gene3D G3DSA:3.30.450.20 154 276 3.6E-25 T 25-04-2017 CLFO_RS12850 daa3515605694e5f462e724a0a2c3471 339 SUPERFAMILY SSF50129 1 171 9.28E-46 T 25-04-2017 IPR011032 GroES-like CLFO_RS12850 daa3515605694e5f462e724a0a2c3471 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 25-04-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CLFO_RS12850 daa3515605694e5f462e724a0a2c3471 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 131 3.0E-34 T 25-04-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLFO_RS12850 daa3515605694e5f462e724a0a2c3471 339 SMART SM00829 5 336 7.9E-6 T 25-04-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CLFO_RS12850 daa3515605694e5f462e724a0a2c3471 339 SUPERFAMILY SSF51735 141 301 2.31E-33 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS12850 daa3515605694e5f462e724a0a2c3471 339 Gene3D G3DSA:3.90.180.10 1 164 3.0E-51 T 25-04-2017 IPR011032 GroES-like CLFO_RS12850 daa3515605694e5f462e724a0a2c3471 339 Gene3D G3DSA:3.40.50.720 165 283 1.4E-36 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS12850 daa3515605694e5f462e724a0a2c3471 339 Pfam PF00107 Zinc-binding dehydrogenase 172 295 1.3E-29 T 25-04-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLFO_RS15005 ee089e1b8f1f1d27c24670c7b00edd41 237 Gene3D G3DSA:1.10.10.10 136 236 1.1E-33 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15005 ee089e1b8f1f1d27c24670c7b00edd41 237 SMART SM00448 3 113 9.9E-40 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15005 ee089e1b8f1f1d27c24670c7b00edd41 237 Gene3D G3DSA:3.40.50.2300 2 121 2.4E-38 T 25-04-2017 CLFO_RS15005 ee089e1b8f1f1d27c24670c7b00edd41 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 9.7E-27 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS15005 ee089e1b8f1f1d27c24670c7b00edd41 237 SUPERFAMILY SSF46894 135 235 5.39E-28 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS15005 ee089e1b8f1f1d27c24670c7b00edd41 237 Pfam PF00072 Response regulator receiver domain 5 113 9.4E-29 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15005 ee089e1b8f1f1d27c24670c7b00edd41 237 SMART SM00862 158 234 1.5E-24 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS15005 ee089e1b8f1f1d27c24670c7b00edd41 237 SUPERFAMILY SSF52172 4 119 2.13E-39 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS06670 924ae032c9e4993010a4f56be318a793 308 SMART SM00244 20 205 2.2E-23 T 25-04-2017 IPR001107 Band 7 domain CLFO_RS06670 924ae032c9e4993010a4f56be318a793 308 Pfam PF01145 SPFH domain / Band 7 family 23 219 2.8E-22 T 25-04-2017 IPR001107 Band 7 domain CLFO_RS06670 924ae032c9e4993010a4f56be318a793 308 SUPERFAMILY SSF117892 87 211 5.75E-18 T 25-04-2017 IPR001107 Band 7 domain CLFO_RS06670 924ae032c9e4993010a4f56be318a793 308 Gene3D G3DSA:1.20.5.620 205 235 1.3E-4 T 25-04-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLFO_RS06670 924ae032c9e4993010a4f56be318a793 308 TIGRFAM TIGR01933 hflK: HflK protein 23 305 4.5E-61 T 25-04-2017 IPR010201 HflK GO:0016021 CLFO_RS16475 b4492bf9847cc20a8d7ba86a96bc15ee 309 SUPERFAMILY SSF161098 95 292 1.38E-14 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS16475 b4492bf9847cc20a8d7ba86a96bc15ee 309 Gene3D G3DSA:1.10.3720.10 92 304 1.4E-17 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS16475 b4492bf9847cc20a8d7ba86a96bc15ee 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 307 4.6E-40 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS02280 f324048b2aced578aabac5f535b7701d 375 Gene3D G3DSA:3.40.50.720 2 182 7.5E-40 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS02280 f324048b2aced578aabac5f535b7701d 375 SUPERFAMILY SSF51735 6 170 4.44E-47 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS02280 f324048b2aced578aabac5f535b7701d 375 Gene3D G3DSA:3.30.70.260 295 341 1.9E-6 T 25-04-2017 CLFO_RS02280 f324048b2aced578aabac5f535b7701d 375 SUPERFAMILY SSF48179 177 283 3.97E-30 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS02280 f324048b2aced578aabac5f535b7701d 375 Pfam PF02153 Prephenate dehydrogenase 19 274 9.2E-69 T 25-04-2017 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CLFO_RS02280 f324048b2aced578aabac5f535b7701d 375 Pfam PF01842 ACT domain 295 333 2.5E-6 T 25-04-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CLFO_RS02280 f324048b2aced578aabac5f535b7701d 375 SUPERFAMILY SSF55021 294 355 9.54E-9 T 25-04-2017 CLFO_RS11815 200a05cd56b61259eeac2016b57571f2 176 Gene3D G3DSA:1.20.1200.10 12 168 3.2E-58 T 25-04-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CLFO_RS11815 200a05cd56b61259eeac2016b57571f2 176 Pfam PF01923 Cobalamin adenosyltransferase 3 164 4.0E-58 T 25-04-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CLFO_RS11815 200a05cd56b61259eeac2016b57571f2 176 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 168 2.8E-59 T 25-04-2017 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CLFO_RS11815 200a05cd56b61259eeac2016b57571f2 176 SUPERFAMILY SSF89028 1 168 5.49E-58 T 25-04-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CLFO_RS11815 200a05cd56b61259eeac2016b57571f2 176 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 144 6.0E-41 T 25-04-2017 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CLFO_RS10745 c7907d3f8f8a519dbed07184bb51bb6d 477 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 10 452 4.9E-120 T 25-04-2017 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS10745 c7907d3f8f8a519dbed07184bb51bb6d 477 Pfam PF10397 Adenylosuccinate lyase C-terminus 371 451 2.2E-17 T 25-04-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS10745 c7907d3f8f8a519dbed07184bb51bb6d 477 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 25-04-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 CLFO_RS10745 c7907d3f8f8a519dbed07184bb51bb6d 477 PRINTS PR00149 Fumarate lyase superfamily signature 238 265 6.6E-11 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS10745 c7907d3f8f8a519dbed07184bb51bb6d 477 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 6.6E-11 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS10745 c7907d3f8f8a519dbed07184bb51bb6d 477 PRINTS PR00149 Fumarate lyase superfamily signature 144 162 6.6E-11 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS10745 c7907d3f8f8a519dbed07184bb51bb6d 477 Gene3D G3DSA:1.20.200.10 103 450 5.7E-119 T 25-04-2017 CLFO_RS10745 c7907d3f8f8a519dbed07184bb51bb6d 477 SMART SM00998 370 454 8.2E-27 T 25-04-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CLFO_RS10745 c7907d3f8f8a519dbed07184bb51bb6d 477 Pfam PF00206 Lyase 51 305 3.8E-25 T 25-04-2017 IPR022761 Fumarate lyase, N-terminal CLFO_RS10745 c7907d3f8f8a519dbed07184bb51bb6d 477 Gene3D G3DSA:1.10.275.10 11 102 9.3E-31 T 25-04-2017 IPR024083 Fumarase/histidase, N-terminal CLFO_RS10745 c7907d3f8f8a519dbed07184bb51bb6d 477 SUPERFAMILY SSF48557 8 456 6.75E-103 T 25-04-2017 IPR008948 L-Aspartase-like GO:0003824 CLFO_RS17175 8998068c548f4a93f04f102b6c706042 96 SUPERFAMILY SSF52980 5 88 1.47E-7 T 25-04-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLFO_RS17175 8998068c548f4a93f04f102b6c706042 96 SMART SM00990 1 83 3.5E-6 T 25-04-2017 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 CLFO_RS17175 8998068c548f4a93f04f102b6c706042 96 Gene3D G3DSA:3.40.1350.10 3 74 5.2E-4 T 25-04-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 CLFO_RS12435 cef3d4154914692ac97cda82018116da 398 PIRSF PIRSF029895 2 398 7.0E-123 T 25-04-2017 IPR010690 Putative stage IV sporulation YqfD CLFO_RS12435 cef3d4154914692ac97cda82018116da 398 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 6 388 1.1E-102 T 25-04-2017 IPR010690 Putative stage IV sporulation YqfD CLFO_RS12435 cef3d4154914692ac97cda82018116da 398 Pfam PF06898 Putative stage IV sporulation protein YqfD 8 387 2.9E-125 T 25-04-2017 IPR010690 Putative stage IV sporulation YqfD CLFO_RS13350 58e9bebbc93bc2b0aaaf88f65f866aff 96 Gene3D G3DSA:3.30.460.10 3 95 1.8E-25 T 25-04-2017 CLFO_RS13350 58e9bebbc93bc2b0aaaf88f65f866aff 96 SUPERFAMILY SSF81301 5 95 1.43E-20 T 25-04-2017 CLFO_RS13350 58e9bebbc93bc2b0aaaf88f65f866aff 96 Pfam PF01909 Nucleotidyltransferase domain 16 94 2.5E-14 T 25-04-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CLFO_RS08955 88f2a7dd8b229c00becdd05651fb700a 453 Pfam PF13186 Iron-sulfur cluster-binding domain 344 404 1.2E-6 T 25-04-2017 IPR023885 4Fe4S-binding SPASM domain CLFO_RS08955 88f2a7dd8b229c00becdd05651fb700a 453 Pfam PF13353 4Fe-4S single cluster domain 97 218 1.2E-14 T 25-04-2017 CLFO_RS08955 88f2a7dd8b229c00becdd05651fb700a 453 Pfam PF04055 Radical SAM superfamily 101 216 2.6E-10 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS08955 88f2a7dd8b229c00becdd05651fb700a 453 TIGRFAM TIGR03974 rSAM_six_Cys: SCIFF radical SAM maturase 4 447 7.6E-218 T 25-04-2017 IPR024025 SCIFF radical SAM maturase CLFO_RS08955 88f2a7dd8b229c00becdd05651fb700a 453 SUPERFAMILY SSF102114 92 413 3.66E-57 T 25-04-2017 CLFO_RS08955 88f2a7dd8b229c00becdd05651fb700a 453 Gene3D G3DSA:3.20.20.70 88 422 2.7E-58 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS08955 88f2a7dd8b229c00becdd05651fb700a 453 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 100 111 - T 25-04-2017 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS08955 88f2a7dd8b229c00becdd05651fb700a 453 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 344 429 2.8E-20 T 25-04-2017 IPR023885 4Fe4S-binding SPASM domain CLFO_RS09590 f19f338f156f393f39a130aaec1adc42 376 Gene3D G3DSA:3.30.420.40 203 343 3.3E-17 T 25-04-2017 CLFO_RS09590 f19f338f156f393f39a130aaec1adc42 376 SUPERFAMILY SSF53067 19 180 1.35E-10 T 25-04-2017 CLFO_RS09590 f19f338f156f393f39a130aaec1adc42 376 SUPERFAMILY SSF53067 197 344 4.05E-22 T 25-04-2017 CLFO_RS09590 f19f338f156f393f39a130aaec1adc42 376 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 19 353 9.7E-46 T 25-04-2017 IPR005883 Type IV pilus assembly protein PilM CLFO_RS09590 f19f338f156f393f39a130aaec1adc42 376 SMART SM00842 18 181 0.0012 T 25-04-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CLFO_RS09590 f19f338f156f393f39a130aaec1adc42 376 Gene3D G3DSA:3.30.420.40 14 87 2.4E-7 T 25-04-2017 CLFO_RS09590 f19f338f156f393f39a130aaec1adc42 376 PIRSF PIRSF019169 5 376 2.6E-89 T 25-04-2017 IPR005883 Type IV pilus assembly protein PilM CLFO_RS09590 f19f338f156f393f39a130aaec1adc42 376 Pfam PF11104 Type IV pilus assembly protein PilM; 21 255 3.3E-26 T 25-04-2017 IPR005883 Type IV pilus assembly protein PilM CLFO_RS16960 22e48edc2a4d0805b8f4dbea58e8fb4a 191 Gene3D G3DSA:1.10.10.60 2 55 1.0E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16960 22e48edc2a4d0805b8f4dbea58e8fb4a 191 SUPERFAMILY SSF46689 2 68 1.85E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16960 22e48edc2a4d0805b8f4dbea58e8fb4a 191 Gene3D G3DSA:1.10.357.10 56 180 1.1E-25 T 25-04-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLFO_RS16960 22e48edc2a4d0805b8f4dbea58e8fb4a 191 SUPERFAMILY SSF48498 75 180 1.25E-10 T 25-04-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLFO_RS08440 6724b7ab881eba0d0c1fd655eee3c364 167 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 120 9.0E-4 T 25-04-2017 CLFO_RS08440 6724b7ab881eba0d0c1fd655eee3c364 167 PIRSF PIRSF027391 1 167 7.4E-48 T 25-04-2017 IPR014535 Predicted heptaprenyl diphosphate synthase, component I CLFO_RS08440 6724b7ab881eba0d0c1fd655eee3c364 167 Pfam PF07456 Heptaprenyl diphosphate synthase component I 12 158 6.4E-47 T 25-04-2017 IPR010898 Heptaprenyl diphosphate synthase component I CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 Pfam PF13519 von Willebrand factor type A domain 39 134 8.2E-9 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 Gene3D G3DSA:3.40.50.410 40 164 7.1E-8 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 SUPERFAMILY SSF52317 248 372 3.05E-34 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 SUPERFAMILY SSF52317 555 641 3.05E-34 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 Pfam PF00092 von Willebrand factor type A domain 379 539 2.2E-18 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 SUPERFAMILY SSF53300 377 542 1.95E-27 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 SUPERFAMILY SSF53300 40 165 3.76E-13 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 Gene3D G3DSA:3.40.50.410 376 542 9.2E-21 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 Pfam PF07090 Putative glutamine amidotransferase 569 643 4.5E-9 T 25-04-2017 IPR010768 Putative glutamine amidotransferase CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 Gene3D G3DSA:3.40.50.880 556 646 2.7E-49 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 Gene3D G3DSA:3.40.50.880 239 375 2.7E-49 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 SMART SM00327 376 543 7.3E-18 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS02695 7f2ca4e0fb51cff28bb2a81616e28335 808 SMART SM00327 36 186 2.8E-5 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS08985 b80a2e1cdd5d1dbca364752a7a78d531 172 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.443 T 25-04-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 CLFO_RS08985 b80a2e1cdd5d1dbca364752a7a78d531 172 Gene3D G3DSA:3.40.50.2020 2 171 5.0E-66 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS08985 b80a2e1cdd5d1dbca364752a7a78d531 172 Pfam PF00156 Phosphoribosyl transferase domain 32 158 2.9E-12 T 25-04-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLFO_RS08985 b80a2e1cdd5d1dbca364752a7a78d531 172 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 9.4E-71 T 25-04-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 CLFO_RS08985 b80a2e1cdd5d1dbca364752a7a78d531 172 SUPERFAMILY SSF53271 3 171 4.83E-51 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS15475 60215e5894bdbaceea900317ac15caa0 128 SUPERFAMILY SSF52402 6 102 6.28E-6 T 25-04-2017 CLFO_RS15475 60215e5894bdbaceea900317ac15caa0 128 Gene3D G3DSA:3.40.50.620 5 116 2.3E-6 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS01370 1813adb51845b077c20a5edec5d2784d 78 SUPERFAMILY SSF117130 1 55 1.57E-18 T 25-04-2017 CLFO_RS01370 1813adb51845b077c20a5edec5d2784d 78 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-14 T 25-04-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CLFO_RS01370 1813adb51845b077c20a5edec5d2784d 78 Pfam PF02599 Global regulator protein family 1 53 1.0E-23 T 25-04-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CLFO_RS01370 1813adb51845b077c20a5edec5d2784d 78 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 60 3.8E-25 T 25-04-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CLFO_RS01370 1813adb51845b077c20a5edec5d2784d 78 Hamap MF_00167 Carbon storage regulator [csrA]. 1 69 19.366 T 25-04-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Pfam PF08659 KR domain 1372 1552 1.3E-49 T 25-04-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SUPERFAMILY SSF47336 1749 1779 1.16E-14 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SUPERFAMILY SSF47336 1644 1717 1.16E-14 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2131 2238 6.6E-9 T 25-04-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 585 703 4.1E-13 T 25-04-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 1920 1938 - T 25-04-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SUPERFAMILY SSF51735 2505 2802 6.47E-39 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SUPERFAMILY SSF53901 1763 2117 2.18E-83 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Pfam PF00550 Phosphopantetheine attachment site 2393 2457 6.3E-7 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Pfam PF00550 Phosphopantetheine attachment site 78 140 3.7E-10 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Pfam PF00550 Phosphopantetheine attachment site 1647 1711 3.8E-12 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SMART SM00825 Beta-ketoacyl synthase 1767 2181 7.2E-155 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SMART SM00825 Beta-ketoacyl synthase 205 643 8.7E-192 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Gene3D G3DSA:3.40.47.10 469 642 6.8E-55 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Gene3D G3DSA:3.40.47.10 2016 2182 6.2E-40 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Pfam PF14765 Polyketide synthase dehydratase 834 1119 6.8E-52 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Pfam PF07993 Male sterility protein 2508 2743 1.8E-57 T 25-04-2017 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SUPERFAMILY SSF51735 1370 1592 3.17E-37 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Gene3D G3DSA:1.10.1200.10 2385 2459 3.4E-9 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Gene3D G3DSA:1.10.1200.10 1644 1773 1.2E-17 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Gene3D G3DSA:1.10.1200.10 77 148 2.4E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Gene3D G3DSA:1.10.1200.10 187 211 2.4E-13 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Gene3D G3DSA:3.40.50.720 2505 2790 1.7E-42 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Gene3D G3DSA:3.40.50.720 2823 2843 1.7E-42 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 464 581 6.5E-42 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2010 2127 1.9E-32 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 2505 2866 1.6E-89 T 25-04-2017 IPR010080 Thioester reductase-like domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SUPERFAMILY SSF53901 202 574 1.71E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SUPERFAMILY SSF53901 619 638 1.71E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SMART SM00826 834 1001 5.1E-6 T 25-04-2017 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SMART SM00823 Phosphopantetheine attachment site 1645 1716 3.1E-10 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SMART SM00823 Phosphopantetheine attachment site 78 145 3.4E-4 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SMART SM00823 Phosphopantetheine attachment site 2389 2444 0.18 T 25-04-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SUPERFAMILY SSF47336 77 146 6.41E-10 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SUPERFAMILY SSF47336 187 215 6.41E-10 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1372 1553 1.2E-38 T 25-04-2017 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 SUPERFAMILY SSF47336 2385 2458 4.58E-8 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2416 2431 - T 25-04-2017 IPR006162 Phosphopantetheine attachment site CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Gene3D G3DSA:3.40.47.10 1774 2014 4.7E-87 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Gene3D G3DSA:3.40.47.10 212 468 1.7E-88 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Gene3D G3DSA:3.40.50.720 1370 1590 2.5E-51 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1915 1931 - T 25-04-2017 IPR018201 Beta-ketoacyl synthase, active site CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 203 456 3.4E-81 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04840 5cdb0d29d568077af8f367addedf6c1a 2874 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1765 2002 7.0E-83 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS13785 7968bb79c9e69bb23763a117ef3a4019 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 240 3.7E-16 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS13785 7968bb79c9e69bb23763a117ef3a4019 264 Gene3D G3DSA:1.10.3720.10 61 250 7.6E-20 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS13785 7968bb79c9e69bb23763a117ef3a4019 264 SUPERFAMILY SSF161098 63 248 2.88E-27 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS11225 0960fdf0852bbfb401d4f10110cc34d9 81 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 25-04-2017 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS11225 0960fdf0852bbfb401d4f10110cc34d9 81 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 26.402 T 25-04-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11225 0960fdf0852bbfb401d4f10110cc34d9 81 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 3.8E-36 T 25-04-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11225 0960fdf0852bbfb401d4f10110cc34d9 81 Gene3D G3DSA:3.30.1320.10 2 81 2.8E-36 T 25-04-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11225 0960fdf0852bbfb401d4f10110cc34d9 81 SUPERFAMILY SSF54565 2 80 8.89E-34 T 25-04-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11225 0960fdf0852bbfb401d4f10110cc34d9 81 Pfam PF00886 Ribosomal protein S16 9 67 2.6E-26 T 25-04-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00685 0aaf37610424614bf73513a9f155139e 714 SUPERFAMILY SSF48452 520 655 2.11E-10 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS00685 0aaf37610424614bf73513a9f155139e 714 Gene3D G3DSA:1.25.40.10 519 664 3.3E-15 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS00685 0aaf37610424614bf73513a9f155139e 714 Pfam PF04932 O-Antigen ligase 203 410 2.0E-16 T 25-04-2017 IPR007016 O-antigen ligase-related CLFO_RS19845 b6351b6fab2c9b3b68be26e53c118ceb 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 154 9.5E-67 T 25-04-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CLFO_RS19845 b6351b6fab2c9b3b68be26e53c118ceb 157 SUPERFAMILY SSF69765 1 155 4.58E-66 T 25-04-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CLFO_RS19845 b6351b6fab2c9b3b68be26e53c118ceb 157 Gene3D G3DSA:3.30.1330.50 1 155 6.4E-70 T 25-04-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CLFO_RS19845 b6351b6fab2c9b3b68be26e53c118ceb 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.197 T 25-04-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CLFO_RS19845 b6351b6fab2c9b3b68be26e53c118ceb 157 Pfam PF02542 YgbB family 1 154 3.9E-66 T 25-04-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CLFO_RS19845 b6351b6fab2c9b3b68be26e53c118ceb 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 25-04-2017 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 35 45 - T 25-04-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 Gene3D G3DSA:3.30.390.30 329 459 1.0E-45 T 25-04-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 449 1.7E-35 T 25-04-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 322 6.2E-75 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 Gene3D G3DSA:3.50.50.60 143 328 2.2E-59 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 SUPERFAMILY SSF51905 3 364 1.88E-67 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PIRSF PIRSF000350 1 459 1.3E-102 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 SUPERFAMILY SSF55424 337 460 1.89E-40 T 25-04-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 2 459 1.9E-173 T 25-04-2017 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 6.2E-74 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 358 6.2E-74 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 6.2E-74 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 6.2E-74 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 34 49 6.2E-74 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 6.2E-74 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 6.2E-74 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 6.2E-74 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 6.2E-74 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 9.1E-39 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 9.1E-39 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 9.1E-39 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 9.1E-39 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 9.1E-39 T 25-04-2017 CLFO_RS02585 2fb91d96bbe05d4207034547c6cabaee 462 Gene3D G3DSA:3.50.50.60 1 142 1.6E-44 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS10135 6f57cd6d339dc99eb606ce529f259e5e 265 Pfam PF12730 ABC-2 family transporter protein 25 171 1.2E-6 T 25-04-2017 IPR032688 ABC-2 family transporter protein GO:0006810 CLFO_RS14000 30b76d8231135b8d99cafc91c3d6e164 460 Pfam PF13347 MFS/sugar transport protein 19 445 3.8E-84 T 25-04-2017 CLFO_RS14000 30b76d8231135b8d99cafc91c3d6e164 460 Gene3D G3DSA:1.20.1250.20 21 216 2.2E-5 T 25-04-2017 CLFO_RS14000 30b76d8231135b8d99cafc91c3d6e164 460 Gene3D G3DSA:1.20.1250.20 243 453 2.8E-11 T 25-04-2017 CLFO_RS14000 30b76d8231135b8d99cafc91c3d6e164 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 20 459 3.4E-69 T 25-04-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CLFO_RS14000 30b76d8231135b8d99cafc91c3d6e164 460 SUPERFAMILY SSF103473 16 456 5.58E-27 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS02830 284122600547ec03e67382c3fa1b77c9 143 Gene3D G3DSA:3.40.50.360 4 142 1.7E-47 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS02830 284122600547ec03e67382c3fa1b77c9 143 Pfam PF00258 Flavodoxin 6 135 3.1E-16 T 25-04-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CLFO_RS02830 284122600547ec03e67382c3fa1b77c9 143 TIGRFAM TIGR01753 flav_short: flavodoxin 4 141 4.8E-49 T 25-04-2017 IPR010087 Flavodoxin, short chain GO:0010181 CLFO_RS02830 284122600547ec03e67382c3fa1b77c9 143 SUPERFAMILY SSF52218 3 142 6.36E-40 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS02830 284122600547ec03e67382c3fa1b77c9 143 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 25-04-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLFO_RS15685 384a55f0d3a07dfb89ab1ca1c62ccef6 194 SUPERFAMILY SSF46689 2 82 3.13E-20 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS15685 384a55f0d3a07dfb89ab1ca1c62ccef6 194 Gene3D G3DSA:1.10.357.10 58 189 1.7E-12 T 25-04-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLFO_RS15685 384a55f0d3a07dfb89ab1ca1c62ccef6 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 4.9E-18 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS15685 384a55f0d3a07dfb89ab1ca1c62ccef6 194 SUPERFAMILY SSF48498 81 190 2.31E-10 T 25-04-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLFO_RS15685 384a55f0d3a07dfb89ab1ca1c62ccef6 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.5E-11 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS15685 384a55f0d3a07dfb89ab1ca1c62ccef6 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.5E-11 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS15685 384a55f0d3a07dfb89ab1ca1c62ccef6 194 Gene3D G3DSA:1.10.10.60 3 57 2.2E-22 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS03420 ec3532f0f9da3a1c6191a8eb19b3764a 142 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 2 35 0.0031 T 25-04-2017 IPR006530 YD repeat CLFO_RS03420 ec3532f0f9da3a1c6191a8eb19b3764a 142 Pfam PF08481 GBS Bsp-like repeat 55 138 1.9E-24 T 25-04-2017 IPR013688 GBS Bsp-like CLFO_RS10650 8a7fa5f7c633ac6c30ffd8226de55469 398 SUPERFAMILY SSF53383 1 392 7.89E-94 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS10650 8a7fa5f7c633ac6c30ffd8226de55469 398 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 90 110 4.7E-13 T 25-04-2017 CLFO_RS10650 8a7fa5f7c633ac6c30ffd8226de55469 398 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 112 133 4.7E-13 T 25-04-2017 CLFO_RS10650 8a7fa5f7c633ac6c30ffd8226de55469 398 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 226 250 4.7E-13 T 25-04-2017 CLFO_RS10650 8a7fa5f7c633ac6c30ffd8226de55469 398 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 160 184 4.7E-13 T 25-04-2017 CLFO_RS10650 8a7fa5f7c633ac6c30ffd8226de55469 398 Pfam PF00155 Aminotransferase class I and II 35 384 6.0E-48 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS10650 8a7fa5f7c633ac6c30ffd8226de55469 398 Gene3D G3DSA:3.40.640.10 54 272 2.7E-64 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS10650 8a7fa5f7c633ac6c30ffd8226de55469 398 Gene3D G3DSA:3.90.1150.10 273 393 1.6E-27 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS10650 8a7fa5f7c633ac6c30ffd8226de55469 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 232 245 - T 25-04-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CLFO_RS02480 c01bdc78a4f391c17a63e838b97aed95 334 Gene3D G3DSA:3.30.1330.10 19 150 1.2E-24 T 25-04-2017 IPR016188 PurM-like, N-terminal domain CLFO_RS02480 c01bdc78a4f391c17a63e838b97aed95 334 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 5 334 9.6E-123 T 25-04-2017 IPR011854 Hydrogenase expression/formation protein HypE CLFO_RS02480 c01bdc78a4f391c17a63e838b97aed95 334 PIRSF PIRSF005644 1 334 1.0E-112 T 25-04-2017 IPR011854 Hydrogenase expression/formation protein HypE CLFO_RS02480 c01bdc78a4f391c17a63e838b97aed95 334 Pfam PF02769 AIR synthase related protein, C-terminal domain 159 302 9.5E-18 T 25-04-2017 IPR010918 AIR synthase-related protein, C-terminal domain CLFO_RS02480 c01bdc78a4f391c17a63e838b97aed95 334 SUPERFAMILY SSF56042 156 326 1.79E-30 T 25-04-2017 IPR010918 AIR synthase-related protein, C-terminal domain CLFO_RS02480 c01bdc78a4f391c17a63e838b97aed95 334 SUPERFAMILY SSF55326 5 150 4.71E-34 T 25-04-2017 CLFO_RS02480 c01bdc78a4f391c17a63e838b97aed95 334 Gene3D G3DSA:3.90.650.10 158 303 1.2E-15 T 25-04-2017 IPR010918 AIR synthase-related protein, C-terminal domain CLFO_RS02480 c01bdc78a4f391c17a63e838b97aed95 334 Pfam PF00586 AIR synthase related protein, N-terminal domain 49 149 3.2E-17 T 25-04-2017 IPR016188 PurM-like, N-terminal domain CLFO_RS05285 b843e481feb2896cc1018e0e14bd17cc 181 SUPERFAMILY SSF52540 5 180 2.24E-46 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05285 b843e481feb2896cc1018e0e14bd17cc 181 Gene3D G3DSA:3.40.50.300 3 180 3.5E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05285 b843e481feb2896cc1018e0e14bd17cc 181 PIRSF PIRSF015617 1 181 4.2E-57 T 25-04-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CLFO_RS05285 b843e481feb2896cc1018e0e14bd17cc 181 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 7 180 7.2E-59 T 25-04-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CLFO_RS07030 fd162bd764518a17742231048734a09b 147 SUPERFAMILY SSF117856 1 145 4.19E-26 T 25-04-2017 CLFO_RS07030 fd162bd764518a17742231048734a09b 147 Pfam PF03479 Domain of unknown function (DUF296) 10 127 7.0E-11 T 25-04-2017 IPR005175 PPC domain CLFO_RS07030 fd162bd764518a17742231048734a09b 147 Gene3D G3DSA:3.30.1330.80 1 147 4.3E-27 T 25-04-2017 CLFO_RS10860 df606497e0a547188ac66f8aa98d51bc 314 SUPERFAMILY SSF82114 172 307 1.81E-43 T 25-04-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CLFO_RS10860 df606497e0a547188ac66f8aa98d51bc 314 SMART SM00904 182 307 3.2E-49 T 25-04-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CLFO_RS10860 df606497e0a547188ac66f8aa98d51bc 314 Gene3D G3DSA:3.40.50.620 2 178 1.4E-57 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS10860 df606497e0a547188ac66f8aa98d51bc 314 Gene3D G3DSA:2.40.30.30 179 307 2.3E-39 T 25-04-2017 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 CLFO_RS10860 df606497e0a547188ac66f8aa98d51bc 314 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 7.0E-77 T 25-04-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS10860 df606497e0a547188ac66f8aa98d51bc 314 SUPERFAMILY SSF52374 16 176 2.34E-28 T 25-04-2017 CLFO_RS10860 df606497e0a547188ac66f8aa98d51bc 314 Pfam PF01687 Riboflavin kinase 183 305 1.0E-32 T 25-04-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CLFO_RS10860 df606497e0a547188ac66f8aa98d51bc 314 PIRSF PIRSF004491 1 311 1.3E-99 T 25-04-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS10860 df606497e0a547188ac66f8aa98d51bc 314 Pfam PF06574 FAD synthetase 17 165 3.9E-46 T 25-04-2017 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS12640 5d5335e22cf10dae836687a4c971045e 424 SUPERFAMILY SSF48452 160 394 4.11E-31 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS12640 5d5335e22cf10dae836687a4c971045e 424 Gene3D G3DSA:1.25.40.10 151 294 8.9E-25 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS12640 5d5335e22cf10dae836687a4c971045e 424 Pfam PF13414 TPR repeat 309 347 3.5E-7 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS12640 5d5335e22cf10dae836687a4c971045e 424 SMART SM00028 302 335 3.2E-4 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS12640 5d5335e22cf10dae836687a4c971045e 424 SMART SM00028 228 261 130.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS12640 5d5335e22cf10dae836687a4c971045e 424 SMART SM00028 160 193 26.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS12640 5d5335e22cf10dae836687a4c971045e 424 SMART SM00028 194 227 24.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS12640 5d5335e22cf10dae836687a4c971045e 424 SMART SM00028 262 295 0.049 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS12640 5d5335e22cf10dae836687a4c971045e 424 SMART SM00028 371 404 65.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS12640 5d5335e22cf10dae836687a4c971045e 424 Gene3D G3DSA:1.25.40.10 303 417 1.6E-16 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS12640 5d5335e22cf10dae836687a4c971045e 424 Pfam PF13429 Tetratricopeptide repeat 156 291 1.2E-8 T 25-04-2017 CLFO_RS20200 55c1a559a78f97fc8d63c03da9b4fec2 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 315 1.1E-23 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS20200 55c1a559a78f97fc8d63c03da9b4fec2 316 SUPERFAMILY SSF161098 49 301 3.66E-36 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS20200 55c1a559a78f97fc8d63c03da9b4fec2 316 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 43 313 6.0E-75 T 25-04-2017 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CLFO_RS20200 55c1a559a78f97fc8d63c03da9b4fec2 316 Gene3D G3DSA:1.10.3720.10 44 315 1.1E-43 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS20485 3e37bbdf6a7c85e3eb07cf5b167d4884 259 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 248 7.9E-109 T 25-04-2017 CLFO_RS20485 3e37bbdf6a7c85e3eb07cf5b167d4884 259 SUPERFAMILY SSF110399 2 239 3.92E-81 T 25-04-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CLFO_RS20485 3e37bbdf6a7c85e3eb07cf5b167d4884 259 Hamap MF_00443 Thiazole synthase [thiG]. 3 254 40.702 T 25-04-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CLFO_RS20485 3e37bbdf6a7c85e3eb07cf5b167d4884 259 Gene3D G3DSA:3.20.20.70 3 255 9.3E-59 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS13070 1365b4e974de166d58ff48ae8b1b0283 265 Gene3D G3DSA:3.40.50.1000 186 238 2.7E-31 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS13070 1365b4e974de166d58ff48ae8b1b0283 265 Gene3D G3DSA:3.40.50.1000 1 77 2.7E-31 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS13070 1365b4e974de166d58ff48ae8b1b0283 265 SUPERFAMILY SSF56784 4 238 2.1E-47 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS13070 1365b4e974de166d58ff48ae8b1b0283 265 Gene3D G3DSA:3.40.50.10410 78 185 5.1E-14 T 25-04-2017 IPR023215 Nitrophenylphosphatase-like domain CLFO_RS13070 1365b4e974de166d58ff48ae8b1b0283 265 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 235 2.1E-35 T 25-04-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA CLFO_RS13070 1365b4e974de166d58ff48ae8b1b0283 265 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 106 2.1E-18 T 25-04-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA CLFO_RS13070 1365b4e974de166d58ff48ae8b1b0283 265 Pfam PF13242 HAD-hyrolase-like 185 238 4.1E-11 T 25-04-2017 CLFO_RS07085 224d26c461a1f85bbc2e4bb44d68909b 379 Pfam PF00395 S-layer homology domain 200 244 5.3E-13 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS07085 224d26c461a1f85bbc2e4bb44d68909b 379 Pfam PF00395 S-layer homology domain 262 304 6.9E-13 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS07085 224d26c461a1f85bbc2e4bb44d68909b 379 Pfam PF00395 S-layer homology domain 328 371 0.0011 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS07085 224d26c461a1f85bbc2e4bb44d68909b 379 Pfam PF00174 Oxidoreductase molybdopterin binding domain 77 197 1.1E-4 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS07085 224d26c461a1f85bbc2e4bb44d68909b 379 Gene3D G3DSA:3.90.420.10 38 201 2.6E-5 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS07085 224d26c461a1f85bbc2e4bb44d68909b 379 SUPERFAMILY SSF56524 39 198 7.06E-5 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS03630 c4508d7f704ac9e6b5ad81dd9cbf217e 349 PIRSF PIRSF006268 1 343 4.2E-99 T 25-04-2017 IPR024932 Flavin transferase ApbE GO:0017013 CLFO_RS03630 c4508d7f704ac9e6b5ad81dd9cbf217e 349 Pfam PF02424 ApbE family 36 319 1.2E-81 T 25-04-2017 IPR024932 Flavin transferase ApbE GO:0017013 CLFO_RS03630 c4508d7f704ac9e6b5ad81dd9cbf217e 349 SUPERFAMILY SSF143631 28 336 3.14E-92 T 25-04-2017 IPR003374 ApbE-like domain CLFO_RS17850 f6f618137b289bb8032bf52899f205fe 274 Gene3D G3DSA:3.40.50.970 3 273 6.9E-114 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS17850 f6f618137b289bb8032bf52899f205fe 274 SUPERFAMILY SSF52518 3 269 3.17E-95 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS17850 f6f618137b289bb8032bf52899f205fe 274 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 270 3.9E-63 T 25-04-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLFO_RS17850 f6f618137b289bb8032bf52899f205fe 274 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 25-04-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CLFO_RS02915 64f4132d0106f13a56e1167881cd181e 438 Gene3D G3DSA:3.40.50.980 91 254 4.1E-7 T 25-04-2017 CLFO_RS02915 64f4132d0106f13a56e1167881cd181e 438 Pfam PF00501 AMP-binding enzyme 35 341 6.1E-17 T 25-04-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CLFO_RS02915 64f4132d0106f13a56e1167881cd181e 438 SUPERFAMILY SSF56801 54 418 2.09E-44 T 25-04-2017 CLFO_RS02915 64f4132d0106f13a56e1167881cd181e 438 Pfam PF14535 AMP-binding enzyme C-terminal domain 343 436 3.1E-18 T 25-04-2017 IPR028154 AMP-dependent ligase, C-terminal CLFO_RS02915 64f4132d0106f13a56e1167881cd181e 438 Gene3D G3DSA:3.30.300.30 333 437 3.8E-28 T 25-04-2017 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 3 95 8.7E-31 T 25-04-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 Gene3D G3DSA:1.10.1060.10 4 110 1.5E-28 T 25-04-2017 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 Gene3D G3DSA:3.50.50.60 111 203 3.9E-21 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 110 391 6.6E-33 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 258 1.8E-13 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 367 385 1.8E-13 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 132 1.8E-13 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 Gene3D G3DSA:3.50.50.60 204 323 1.7E-39 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 SUPERFAMILY SSF46548 5 119 1.2E-21 T 25-04-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 256 2.1E-19 T 25-04-2017 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 379 2.1E-19 T 25-04-2017 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 130 2.1E-19 T 25-04-2017 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 329 345 2.1E-19 T 25-04-2017 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 SUPERFAMILY SSF51971 110 335 1.12E-56 T 25-04-2017 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 Gene3D G3DSA:3.50.50.60 324 402 1.5E-12 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS00495 e857be4805950b6b24626d64ef2efee0 413 SUPERFAMILY SSF51971 314 392 3.77E-5 T 25-04-2017 CLFO_RS00620 c0d3b57c73676ccedae4ba4c57cdcea7 301 Gene3D G3DSA:3.30.420.150 127 296 7.8E-53 T 25-04-2017 CLFO_RS00620 c0d3b57c73676ccedae4ba4c57cdcea7 301 Pfam PF02541 Ppx/GppA phosphatase family 30 297 1.2E-62 T 25-04-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CLFO_RS00620 c0d3b57c73676ccedae4ba4c57cdcea7 301 SUPERFAMILY SSF53067 3 123 2.91E-33 T 25-04-2017 CLFO_RS00620 c0d3b57c73676ccedae4ba4c57cdcea7 301 SUPERFAMILY SSF53067 130 296 1.81E-42 T 25-04-2017 CLFO_RS00620 c0d3b57c73676ccedae4ba4c57cdcea7 301 Gene3D G3DSA:3.30.420.40 1 122 7.0E-38 T 25-04-2017 CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 PIRSF PIRSF000410 1 257 8.1E-74 T 25-04-2017 IPR026024 Chemotaxis protein methyltransferase CheR CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 PRINTS PR00996 Glutamate methyltransferase family signature 23 36 6.2E-37 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 PRINTS PR00996 Glutamate methyltransferase family signature 214 237 6.2E-37 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 PRINTS PR00996 Glutamate methyltransferase family signature 60 72 6.2E-37 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 PRINTS PR00996 Glutamate methyltransferase family signature 129 145 6.2E-37 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 PRINTS PR00996 Glutamate methyltransferase family signature 195 209 6.2E-37 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 PRINTS PR00996 Glutamate methyltransferase family signature 97 117 6.2E-37 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 SMART SM00138 1 254 2.1E-94 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 SUPERFAMILY SSF53335 67 242 8.76E-48 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 Pfam PF03705 CheR methyltransferase, all-alpha domain 4 53 2.4E-15 T 25-04-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 SUPERFAMILY SSF47757 2 66 2.48E-13 T 25-04-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 Gene3D G3DSA:1.10.155.10 5 65 9.0E-11 T 25-04-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 Gene3D G3DSA:3.40.50.150 66 251 2.3E-64 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10675 8140044f233c18b2e97edf6925d0104b 257 Pfam PF01739 CheR methyltransferase, SAM binding domain 67 247 5.7E-60 T 25-04-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLFO_RS00250 0bb948119b670271008950a298556900 337 Gene3D G3DSA:3.40.50.720 2 244 5.4E-74 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS00250 0bb948119b670271008950a298556900 337 Pfam PF00899 ThiF family 7 242 3.1E-65 T 25-04-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLFO_RS00250 0bb948119b670271008950a298556900 337 SUPERFAMILY SSF69572 2 327 2.09E-88 T 25-04-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLFO_RS16830 27dd01e04eb7c541f2f8c3c35c8150ff 235 SMART SM00862 153 229 3.3E-26 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS16830 27dd01e04eb7c541f2f8c3c35c8150ff 235 Pfam PF00072 Response regulator receiver domain 8 117 4.0E-29 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS16830 27dd01e04eb7c541f2f8c3c35c8150ff 235 SUPERFAMILY SSF52172 4 174 1.17E-43 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS16830 27dd01e04eb7c541f2f8c3c35c8150ff 235 Gene3D G3DSA:1.10.10.10 130 231 1.3E-37 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16830 27dd01e04eb7c541f2f8c3c35c8150ff 235 SMART SM00448 6 117 3.0E-46 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS16830 27dd01e04eb7c541f2f8c3c35c8150ff 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 1.2E-28 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS16830 27dd01e04eb7c541f2f8c3c35c8150ff 235 Gene3D G3DSA:3.40.50.2300 2 125 6.1E-42 T 25-04-2017 CLFO_RS13925 8c186a83ba1d6cced02ce809b13b4410 448 Pfam PF02709 N-terminal domain of galactosyltransferase 247 302 6.9E-11 T 25-04-2017 IPR027791 Galactosyltransferase, C-terminal CLFO_RS13925 8c186a83ba1d6cced02ce809b13b4410 448 SUPERFAMILY SSF53448 250 326 2.34E-42 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS13925 8c186a83ba1d6cced02ce809b13b4410 448 SUPERFAMILY SSF53448 38 161 2.34E-42 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS13925 8c186a83ba1d6cced02ce809b13b4410 448 Pfam PF00535 Glycosyl transferase family 2 42 185 4.1E-22 T 25-04-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLFO_RS13925 8c186a83ba1d6cced02ce809b13b4410 448 Gene3D G3DSA:3.90.550.10 210 335 4.8E-42 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS13925 8c186a83ba1d6cced02ce809b13b4410 448 Gene3D G3DSA:3.90.550.10 41 159 4.8E-42 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS20660 12f9128e99b0f02202428e088bbe7622 111 Gene3D G3DSA:1.10.287.1080 1 94 4.7E-19 T 25-04-2017 CLFO_RS20660 12f9128e99b0f02202428e088bbe7622 111 SUPERFAMILY SSF101386 4 105 2.13E-26 T 25-04-2017 CLFO_RS20660 12f9128e99b0f02202428e088bbe7622 111 PIRSF PIRSF029904 2 111 2.9E-51 T 25-04-2017 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD CLFO_RS20660 12f9128e99b0f02202428e088bbe7622 111 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 26 105 2.5E-19 T 25-04-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLFO_RS03530 48e9316582ccb56dc0db6147cf0bee54 355 SUPERFAMILY SSF103365 7 355 9.15E-85 T 25-04-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CLFO_RS03530 48e9316582ccb56dc0db6147cf0bee54 355 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 6 349 1.0E-116 T 25-04-2017 IPR017510 Release factor H-coupled RctB family protein CLFO_RS03530 48e9316582ccb56dc0db6147cf0bee54 355 Pfam PF01139 tRNA-splicing ligase RtcB 107 355 5.1E-53 T 25-04-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CLFO_RS03530 48e9316582ccb56dc0db6147cf0bee54 355 Pfam PF01139 tRNA-splicing ligase RtcB 21 91 3.7E-9 T 25-04-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CLFO_RS10835 287f1a9d826d45b7afd4ff6a5022b504 87 Pfam PF05239 PRC-barrel domain 2 76 3.0E-11 T 25-04-2017 IPR027275 PRC-barrel domain CLFO_RS10835 287f1a9d826d45b7afd4ff6a5022b504 87 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 76 1.0E-26 T 25-04-2017 IPR014238 Sporulation protein YlmC/YmxH CLFO_RS10835 287f1a9d826d45b7afd4ff6a5022b504 87 Gene3D G3DSA:2.30.30.240 1 78 2.2E-21 T 25-04-2017 CLFO_RS10835 287f1a9d826d45b7afd4ff6a5022b504 87 SUPERFAMILY SSF50346 1 75 1.96E-13 T 25-04-2017 IPR011033 PRC-barrel-like CLFO_RS14615 7b181d4ddf4af515c84d404efa53d006 227 Pfam PF00072 Response regulator receiver domain 4 113 7.2E-31 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS14615 7b181d4ddf4af515c84d404efa53d006 227 Gene3D G3DSA:3.40.50.2300 1 125 1.7E-39 T 25-04-2017 CLFO_RS14615 7b181d4ddf4af515c84d404efa53d006 227 SUPERFAMILY SSF52172 1 134 8.11E-40 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS14615 7b181d4ddf4af515c84d404efa53d006 227 SMART SM00448 2 113 8.3E-38 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS14615 7b181d4ddf4af515c84d404efa53d006 227 Gene3D G3DSA:1.25.40.10 136 204 1.1E-10 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS14615 7b181d4ddf4af515c84d404efa53d006 227 SUPERFAMILY SSF48452 130 209 7.37E-12 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS05715 120dd6d9e828880e2956c85e55e0e9c4 1634 SUPERFAMILY SSF48371 394 534 2.26E-15 T 25-04-2017 IPR016024 Armadillo-type fold GO:0005488 CLFO_RS05715 120dd6d9e828880e2956c85e55e0e9c4 1634 SUPERFAMILY SSF48371 572 605 2.26E-15 T 25-04-2017 IPR016024 Armadillo-type fold GO:0005488 CLFO_RS05715 120dd6d9e828880e2956c85e55e0e9c4 1634 SUPERFAMILY SSF48371 655 859 2.26E-15 T 25-04-2017 IPR016024 Armadillo-type fold GO:0005488 CLFO_RS05715 120dd6d9e828880e2956c85e55e0e9c4 1634 SUPERFAMILY SSF52374 921 1119 5.96E-25 T 25-04-2017 CLFO_RS05715 120dd6d9e828880e2956c85e55e0e9c4 1634 Gene3D G3DSA:1.10.3210.10 178 325 1.1E-5 T 25-04-2017 IPR006674 HD domain CLFO_RS05715 120dd6d9e828880e2956c85e55e0e9c4 1634 Gene3D G3DSA:1.25.10.10 695 745 3.1E-9 T 25-04-2017 IPR011989 Armadillo-like helical CLFO_RS05715 120dd6d9e828880e2956c85e55e0e9c4 1634 Gene3D G3DSA:1.25.10.10 398 606 3.1E-9 T 25-04-2017 IPR011989 Armadillo-like helical CLFO_RS05715 120dd6d9e828880e2956c85e55e0e9c4 1634 Gene3D G3DSA:3.40.50.620 921 1048 1.9E-30 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS05715 120dd6d9e828880e2956c85e55e0e9c4 1634 Gene3D G3DSA:3.40.50.620 1081 1120 1.9E-30 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS05715 120dd6d9e828880e2956c85e55e0e9c4 1634 SUPERFAMILY SSF109604 161 284 2.51E-10 T 25-04-2017 CLFO_RS05715 120dd6d9e828880e2956c85e55e0e9c4 1634 Pfam PF01467 Cytidylyltransferase-like 924 1089 2.7E-10 T 25-04-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLFO_RS00375 1f6184e1cd8af89b9788174e55f2bbf2 210 SUPERFAMILY SSF52540 1 206 4.02E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00375 1f6184e1cd8af89b9788174e55f2bbf2 210 Pfam PF02223 Thymidylate kinase 9 196 1.8E-58 T 25-04-2017 CLFO_RS00375 1f6184e1cd8af89b9788174e55f2bbf2 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 205 31.927 T 25-04-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CLFO_RS00375 1f6184e1cd8af89b9788174e55f2bbf2 210 Gene3D G3DSA:3.40.50.300 3 205 1.2E-73 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00375 1f6184e1cd8af89b9788174e55f2bbf2 210 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 25-04-2017 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CLFO_RS00375 1f6184e1cd8af89b9788174e55f2bbf2 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 197 1.3E-63 T 25-04-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CLFO_RS01630 fabd05e43242452627404597c4608195 238 SUPERFAMILY SSF52540 2 233 6.63E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01630 fabd05e43242452627404597c4608195 238 Pfam PF00005 ABC transporter 17 162 2.8E-32 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS01630 fabd05e43242452627404597c4608195 238 PIRSF PIRSF039137 1 235 2.8E-115 T 25-04-2017 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CLFO_RS01630 fabd05e43242452627404597c4608195 238 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS01630 fabd05e43242452627404597c4608195 238 Gene3D G3DSA:3.40.50.300 1 230 1.3E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01630 fabd05e43242452627404597c4608195 238 SMART SM00382 26 211 1.5E-6 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS07955 701b0722f244a8ac745e4b6629034958 209 Pfam PF12164 Stage V sporulation protein AA 7 90 4.3E-15 T 25-04-2017 IPR021997 Stage V sporulation protein AA CLFO_RS07955 701b0722f244a8ac745e4b6629034958 209 Gene3D G3DSA:2.60.480.10 5 96 9.8E-15 T 25-04-2017 CLFO_RS00935 d7225faaa927532eb4d3e67d92283d03 146 Gene3D G3DSA:2.60.200.20 46 142 1.3E-27 T 25-04-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CLFO_RS00935 d7225faaa927532eb4d3e67d92283d03 146 SUPERFAMILY SSF49879 49 142 6.12E-28 T 25-04-2017 IPR008984 SMAD/FHA domain GO:0005515 CLFO_RS00935 d7225faaa927532eb4d3e67d92283d03 146 SMART SM00240 70 120 7.6E-16 T 25-04-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CLFO_RS00935 d7225faaa927532eb4d3e67d92283d03 146 Pfam PF00498 FHA domain 72 135 6.5E-21 T 25-04-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CLFO_RS14490 fbdb1bdfc279983fc80fa83c6b800b09 660 PIRSF PIRSF018968 1 660 2.9E-91 T 25-04-2017 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 CLFO_RS14490 fbdb1bdfc279983fc80fa83c6b800b09 660 Pfam PF02687 FtsX-like permease family 60 178 2.7E-14 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS13880 08863d5f12c70c32a2544bc5b59a2494 487 ProSitePatterns PS00337 Beta-lactamase class-D active site. 286 296 - T 25-04-2017 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 CLFO_RS13880 08863d5f12c70c32a2544bc5b59a2494 487 Gene3D G3DSA:3.30.2010.10 33 116 7.6E-10 T 25-04-2017 CLFO_RS13880 08863d5f12c70c32a2544bc5b59a2494 487 SUPERFAMILY SSF56601 243 478 1.75E-35 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS13880 08863d5f12c70c32a2544bc5b59a2494 487 Gene3D G3DSA:3.40.710.10 246 482 1.5E-75 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS13880 08863d5f12c70c32a2544bc5b59a2494 487 Pfam PF05569 BlaR1 peptidase M56 3 195 2.6E-53 T 25-04-2017 IPR008756 Peptidase M56 CLFO_RS13880 08863d5f12c70c32a2544bc5b59a2494 487 Pfam PF00905 Penicillin binding protein transpeptidase domain 221 475 2.2E-35 T 25-04-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLFO_RS11820 317b8178cac4e00e3ae04046c7059050 204 SUPERFAMILY SSF55811 26 195 9.21E-29 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS11820 317b8178cac4e00e3ae04046c7059050 204 Gene3D G3DSA:3.90.79.10 22 203 3.5E-35 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS11820 317b8178cac4e00e3ae04046c7059050 204 Pfam PF00293 NUDIX domain 24 137 3.5E-11 T 25-04-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CLFO_RS16720 23066bd5ccb9cc2947a7a1070749c2a3 575 Gene3D G3DSA:3.30.565.10 424 573 1.8E-18 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16720 23066bd5ccb9cc2947a7a1070749c2a3 575 SMART SM00387 467 574 3.4E-4 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16720 23066bd5ccb9cc2947a7a1070749c2a3 575 Pfam PF06580 Histidine kinase 373 451 2.7E-21 T 25-04-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLFO_RS16720 23066bd5ccb9cc2947a7a1070749c2a3 575 SMART SM00304 309 361 2.3E-10 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS16720 23066bd5ccb9cc2947a7a1070749c2a3 575 SUPERFAMILY SSF158472 311 359 1.7E-7 T 25-04-2017 CLFO_RS16720 23066bd5ccb9cc2947a7a1070749c2a3 575 Pfam PF00672 HAMP domain 290 357 1.6E-13 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS16720 23066bd5ccb9cc2947a7a1070749c2a3 575 SUPERFAMILY SSF55874 430 572 4.85E-17 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16720 23066bd5ccb9cc2947a7a1070749c2a3 575 Gene3D G3DSA:3.30.450.20 165 285 6.5E-9 T 25-04-2017 CLFO_RS16720 23066bd5ccb9cc2947a7a1070749c2a3 575 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 572 3.6E-7 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS16720 23066bd5ccb9cc2947a7a1070749c2a3 575 Pfam PF02743 Cache domain 37 270 3.2E-12 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS03610 c471a64153f716beee31ac4db57583d8 537 Pfam PF01895 PhoU domain 445 528 2.0E-13 T 25-04-2017 IPR026022 PhoU domain CLFO_RS03610 c471a64153f716beee31ac4db57583d8 537 Pfam PF01895 PhoU domain 340 425 6.0E-18 T 25-04-2017 IPR026022 PhoU domain CLFO_RS03610 c471a64153f716beee31ac4db57583d8 537 SUPERFAMILY SSF109755 320 532 5.97E-51 T 25-04-2017 CLFO_RS03610 c471a64153f716beee31ac4db57583d8 537 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 3.4E-77 T 25-04-2017 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 CLFO_RS03610 c471a64153f716beee31ac4db57583d8 537 Pfam PF02690 Na+/Pi-cotransporter 140 255 8.2E-21 T 25-04-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CLFO_RS03610 c471a64153f716beee31ac4db57583d8 537 Pfam PF02690 Na+/Pi-cotransporter 13 148 4.3E-53 T 25-04-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CLFO_RS03610 c471a64153f716beee31ac4db57583d8 537 Gene3D G3DSA:1.20.58.220 437 535 1.7E-21 T 25-04-2017 CLFO_RS03610 c471a64153f716beee31ac4db57583d8 537 Gene3D G3DSA:1.20.58.220 322 432 2.7E-24 T 25-04-2017 CLFO_RS16190 070e31a9e5366bb99837dfec112f1705 301 Pfam PF00005 ABC transporter 19 161 4.0E-34 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS16190 070e31a9e5366bb99837dfec112f1705 301 SUPERFAMILY SSF52540 2 228 5.81E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16190 070e31a9e5366bb99837dfec112f1705 301 Gene3D G3DSA:3.40.50.300 1 230 2.9E-68 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16190 070e31a9e5366bb99837dfec112f1705 301 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS16190 070e31a9e5366bb99837dfec112f1705 301 SMART SM00382 28 208 5.4E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 Pfam PF00990 Diguanylate cyclase, GGDEF domain 439 555 7.1E-38 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 Gene3D G3DSA:3.30.450.40 114 268 2.6E-34 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 436 558 3.8E-45 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 Pfam PF13185 GAF domain 129 261 3.2E-18 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 Pfam PF13185 GAF domain 293 426 6.9E-14 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 Gene3D G3DSA:3.30.70.270 598 644 2.4E-50 T 25-04-2017 CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 Gene3D G3DSA:3.30.70.270 441 556 2.4E-50 T 25-04-2017 CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 SMART SM00065 292 436 1.9E-13 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 SMART SM00065 130 271 6.3E-14 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 SUPERFAMILY SSF55781 115 270 3.49E-31 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 SUPERFAMILY SSF55073 444 556 6.51E-42 T 25-04-2017 IPR029787 Nucleotide cyclase CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 SUPERFAMILY SSF55073 598 641 6.51E-42 T 25-04-2017 IPR029787 Nucleotide cyclase CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 Gene3D G3DSA:3.30.450.40 269 439 6.4E-38 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 SUPERFAMILY SSF55781 275 441 9.6E-31 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS18660 675fe8972cf3f3279a2f792e4257e072 649 SMART SM00267 428 643 5.7E-45 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS10805 ee866936f7cac65395d7d177c8c8413b 94 SUPERFAMILY SSF52540 4 94 3.33E-23 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10805 ee866936f7cac65395d7d177c8c8413b 94 Gene3D G3DSA:3.40.50.300 28 94 1.5E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10805 ee866936f7cac65395d7d177c8c8413b 94 Pfam PF00154 recA bacterial DNA recombination protein 6 94 9.2E-42 T 25-04-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLFO_RS13050 3c11d75d846dd638e2648b9184ad214d 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 253 1.1E-16 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS13050 3c11d75d846dd638e2648b9184ad214d 263 SUPERFAMILY SSF161098 4 263 4.95E-61 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS13050 3c11d75d846dd638e2648b9184ad214d 263 Gene3D G3DSA:1.10.3720.10 4 251 1.8E-56 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 Pfam PF02151 UvrB/uvrC motif 623 658 1.7E-10 T 25-04-2017 IPR001943 UVR domain GO:0005515 CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 SMART SM00490 458 544 2.1E-20 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 Gene3D G3DSA:4.10.860.10 606 658 1.8E-15 T 25-04-2017 IPR001943 UVR domain GO:0005515 CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 Pfam PF00271 Helicase conserved C-terminal domain 433 543 1.9E-19 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 Gene3D G3DSA:3.40.50.300 277 337 1.1E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 Gene3D G3DSA:3.40.50.300 387 408 1.1E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 Gene3D G3DSA:3.40.50.300 5 88 1.1E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 Pfam PF04851 Type III restriction enzyme, res subunit 11 137 6.0E-12 T 25-04-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 656 0.0 T 25-04-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 SMART SM00487 8 424 2.1E-27 T 25-04-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 SUPERFAMILY SSF52540 35 81 2.04E-35 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 SUPERFAMILY SSF52540 457 571 2.04E-35 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 SUPERFAMILY SSF46600 615 658 9.94E-12 T 25-04-2017 IPR001943 UVR domain GO:0005515 CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 Pfam PF12344 Ultra-violet resistance protein B 550 591 2.0E-21 T 25-04-2017 IPR024759 UvrB, YAD/RRR-motif-containing domain CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 Gene3D G3DSA:3.30.2060.10 158 228 4.3E-12 T 25-04-2017 CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 658 44.371 T 25-04-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 SUPERFAMILY SSF52540 2 413 6.0E-138 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17685 1fce219e7d4d86d4fa2c535716db6c99 659 Gene3D G3DSA:3.40.50.300 417 577 2.2E-39 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20145 2764edc05dcc48d7f53c191cf004140b 524 Pfam PF12673 Domain of unknown function (DUF3794) 189 268 7.0E-16 T 25-04-2017 IPR024300 Domain of unknown function DUF3794 CLFO_RS20145 2764edc05dcc48d7f53c191cf004140b 524 Pfam PF12673 Domain of unknown function (DUF3794) 37 118 4.9E-19 T 25-04-2017 IPR024300 Domain of unknown function DUF3794 CLFO_RS20145 2764edc05dcc48d7f53c191cf004140b 524 Pfam PF12673 Domain of unknown function (DUF3794) 347 427 2.9E-16 T 25-04-2017 IPR024300 Domain of unknown function DUF3794 CLFO_RS20145 2764edc05dcc48d7f53c191cf004140b 524 Pfam PF01476 LysM domain 477 516 2.9E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS20145 2764edc05dcc48d7f53c191cf004140b 524 Gene3D G3DSA:3.10.350.10 473 516 4.4E-13 T 25-04-2017 IPR018392 LysM domain CLFO_RS20145 2764edc05dcc48d7f53c191cf004140b 524 SMART SM00257 473 517 2.8E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS20145 2764edc05dcc48d7f53c191cf004140b 524 SUPERFAMILY SSF54106 472 516 6.54E-9 T 25-04-2017 IPR018392 LysM domain CLFO_RS13480 a5d639f5b9a6a248c2b247c0291316f8 137 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 25-04-2017 IPR030489 Transcription regulator Rrf2-type, conserved site CLFO_RS13480 a5d639f5b9a6a248c2b247c0291316f8 137 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 5.1E-29 T 25-04-2017 IPR000944 Transcription regulator Rrf2-type CLFO_RS13480 a5d639f5b9a6a248c2b247c0291316f8 137 Gene3D G3DSA:1.10.10.10 1 135 5.4E-29 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13480 a5d639f5b9a6a248c2b247c0291316f8 137 Pfam PF02082 Transcriptional regulator 1 83 4.4E-24 T 25-04-2017 IPR000944 Transcription regulator Rrf2-type CLFO_RS13480 a5d639f5b9a6a248c2b247c0291316f8 137 SUPERFAMILY SSF46785 2 135 3.89E-27 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS05190 410184f24c64ce4f880d5fe2ec6673c4 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 2.3E-32 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS05190 410184f24c64ce4f880d5fe2ec6673c4 87 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.3E-30 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS05190 410184f24c64ce4f880d5fe2ec6673c4 87 Gene3D G3DSA:3.30.1340.10 1 87 4.5E-33 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS05190 410184f24c64ce4f880d5fe2ec6673c4 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.9E-17 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS05190 410184f24c64ce4f880d5fe2ec6673c4 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 5.9E-17 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS05190 410184f24c64ce4f880d5fe2ec6673c4 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 5.9E-17 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS05190 410184f24c64ce4f880d5fe2ec6673c4 87 SUPERFAMILY SSF55594 1 87 1.3E-28 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS05190 410184f24c64ce4f880d5fe2ec6673c4 87 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 25-04-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CLFO_RS07065 cb7d743571baa9098164f6cf9c8d1812 268 Hamap MF_00361 NAD kinase [nadK]. 4 268 24.032 T 25-04-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLFO_RS07065 cb7d743571baa9098164f6cf9c8d1812 268 Pfam PF01513 ATP-NAD kinase 30 231 2.5E-36 T 25-04-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLFO_RS07065 cb7d743571baa9098164f6cf9c8d1812 268 Gene3D G3DSA:2.60.200.30 129 232 1.2E-29 T 25-04-2017 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLFO_RS07065 cb7d743571baa9098164f6cf9c8d1812 268 Gene3D G3DSA:3.40.50.10330 35 128 6.6E-23 T 25-04-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLFO_RS07065 cb7d743571baa9098164f6cf9c8d1812 268 SUPERFAMILY SSF111331 6 267 5.36E-61 T 25-04-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain CLFO_RS00985 4178a6cf56062d6651f3f18f76418050 78 Gene3D G3DSA:1.20.1250.20 21 71 3.9E-4 T 25-04-2017 CLFO_RS00985 4178a6cf56062d6651f3f18f76418050 78 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 14 66 8.4E-19 T 25-04-2017 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter CLFO_RS18380 f9923c84c9df4e61f7d33dd03edfdf56 523 Gene3D G3DSA:3.90.76.10 58 143 1.9E-23 T 25-04-2017 CLFO_RS18380 f9923c84c9df4e61f7d33dd03edfdf56 523 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 437 8.3E-89 T 25-04-2017 IPR000914 Solute-binding protein family 5 domain CLFO_RS18380 f9923c84c9df4e61f7d33dd03edfdf56 523 PIRSF PIRSF002741 2 523 6.1E-94 T 25-04-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLFO_RS18380 f9923c84c9df4e61f7d33dd03edfdf56 523 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 26 521 2.2E-216 T 25-04-2017 IPR011980 Periplasmic nickel-binding protein GO:0015675|GO:0016151|GO:0020037 CLFO_RS18380 f9923c84c9df4e61f7d33dd03edfdf56 523 Gene3D G3DSA:3.40.190.10 144 282 3.1E-37 T 25-04-2017 CLFO_RS18380 f9923c84c9df4e61f7d33dd03edfdf56 523 Gene3D G3DSA:3.10.105.10 283 492 4.2E-49 T 25-04-2017 CLFO_RS18380 f9923c84c9df4e61f7d33dd03edfdf56 523 SUPERFAMILY SSF53850 28 511 1.01E-121 T 25-04-2017 CLFO_RS18380 f9923c84c9df4e61f7d33dd03edfdf56 523 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 74 96 - T 25-04-2017 IPR023765 Solute-binding protein family 5, conserved site CLFO_RS00605 28f6a26ae50c320233608d630c10d2ef 168 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 4 119 1.1E-24 T 25-04-2017 IPR014242 Spore cortex biosynthesis protein, YabQ CLFO_RS00605 28f6a26ae50c320233608d630c10d2ef 168 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 12 89 4.6E-22 T 25-04-2017 IPR019074 Spore cortex biosynthesis protein, YabQ-like CLFO_RS04175 d889da41c5ff4f0fcc62b86cab0285af 328 Gene3D G3DSA:3.40.50.1820 84 323 3.1E-42 T 25-04-2017 IPR029058 Alpha/Beta hydrolase fold CLFO_RS04175 d889da41c5ff4f0fcc62b86cab0285af 328 Pfam PF12146 Serine aminopeptidase, S33 107 199 4.4E-10 T 25-04-2017 IPR022742 Serine aminopeptidase, S33 CLFO_RS04175 d889da41c5ff4f0fcc62b86cab0285af 328 SUPERFAMILY SSF53474 34 325 5.36E-42 T 25-04-2017 IPR029058 Alpha/Beta hydrolase fold CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 Gene3D G3DSA:3.90.105.10 131 163 2.3E-15 T 25-04-2017 CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 Gene3D G3DSA:3.40.190.10 409 507 2.4E-5 T 25-04-2017 CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 313 6.4E-30 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 SUPERFAMILY SSF53218 177 319 1.83E-38 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 SUPERFAMILY SSF53850 428 629 1.36E-16 T 25-04-2017 CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 SMART SM00852 180 317 9.4E-34 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 Pfam PF12727 PBP superfamily domain 426 614 3.5E-65 T 25-04-2017 IPR024370 PBP domain CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 SUPERFAMILY SSF63867 328 400 9.03E-16 T 25-04-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 253 286 - T 25-04-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 Gene3D G3DSA:3.40.190.10 508 621 3.4E-16 T 25-04-2017 CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 SUPERFAMILY SSF63882 13 174 2.35E-35 T 25-04-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 Gene3D G3DSA:3.40.980.10 164 330 1.3E-50 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 Pfam PF00994 Probable molybdopterin binding domain 188 316 1.7E-26 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 Pfam PF03453 MoeA N-terminal region (domain I and II) 14 165 7.4E-22 T 25-04-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 Gene3D G3DSA:2.170.190.11 59 130 1.5E-9 T 25-04-2017 CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 Gene3D G3DSA:2.40.340.10 331 402 4.8E-25 T 25-04-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS07135 b1e40c335197b77b89fe4463e1ed887d 640 Pfam PF03454 MoeA C-terminal region (domain IV) 330 400 1.3E-14 T 25-04-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 SUPERFAMILY SSF55234 106 176 2.62E-26 T 25-04-2017 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 Gene3D G3DSA:3.30.1160.10 107 176 1.9E-31 T 25-04-2017 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 PRINTS PR01693 Cyanase signature 109 123 3.1E-23 T 25-04-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 PRINTS PR01693 Cyanase signature 60 77 3.1E-23 T 25-04-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 PRINTS PR01693 Cyanase signature 40 55 3.1E-23 T 25-04-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 PRINTS PR01693 Cyanase signature 127 143 3.1E-23 T 25-04-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 Gene3D G3DSA:1.10.260.40 29 104 6.7E-21 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 TIGRFAM TIGR00673 cynS: cyanase 32 176 1.0E-48 T 25-04-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 Pfam PF02560 Cyanate lyase C-terminal domain 105 175 8.3E-31 T 25-04-2017 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 SUPERFAMILY SSF47413 29 103 4.64E-15 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 Hamap MF_00535 Cyanate hydratase [cynS]. 1 176 56.404 T 25-04-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 PIRSF PIRSF001263 24 176 1.1E-49 T 25-04-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS13175 9cea9954bbcc623dc21a50c246959208 176 SMART SM01116 101 176 1.4E-39 T 25-04-2017 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CLFO_RS02175 ea05c4f0389244274b70fb9efd24f01b 94 Pfam PF00936 BMC domain 6 81 2.5E-29 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS02175 ea05c4f0389244274b70fb9efd24f01b 94 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 6 49 5.0E-16 T 25-04-2017 CLFO_RS02175 ea05c4f0389244274b70fb9efd24f01b 94 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 23 42 - T 25-04-2017 IPR020808 Bacterial microcompartments protein, conserved site CLFO_RS02175 ea05c4f0389244274b70fb9efd24f01b 94 SUPERFAMILY SSF143414 5 90 2.22E-32 T 25-04-2017 CLFO_RS02175 ea05c4f0389244274b70fb9efd24f01b 94 SMART SM00877 5 81 6.2E-38 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS19405 628e4224600d076fd655f594db3ee4ab 361 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 11 124 1.5E-22 T 25-04-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CLFO_RS19405 628e4224600d076fd655f594db3ee4ab 361 Pfam PF13378 Enolase C-terminal domain-like 149 353 3.8E-49 T 25-04-2017 IPR029065 Enolase C-terminal domain-like CLFO_RS19405 628e4224600d076fd655f594db3ee4ab 361 SMART SM00922 141 239 1.5E-23 T 25-04-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CLFO_RS19405 628e4224600d076fd655f594db3ee4ab 361 SUPERFAMILY SSF54826 1 125 6.53E-34 T 25-04-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS19405 628e4224600d076fd655f594db3ee4ab 361 Gene3D G3DSA:3.20.20.120 124 353 2.3E-75 T 25-04-2017 IPR029065 Enolase C-terminal domain-like CLFO_RS19405 628e4224600d076fd655f594db3ee4ab 361 Gene3D G3DSA:3.30.390.10 1 123 6.1E-42 T 25-04-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS19405 628e4224600d076fd655f594db3ee4ab 361 SUPERFAMILY SSF51604 112 355 1.97E-64 T 25-04-2017 IPR029065 Enolase C-terminal domain-like CLFO_RS17595 6e0a1b7cbe997e8a7de2793525c646d3 304 Gene3D G3DSA:3.30.465.10 92 229 1.8E-46 T 25-04-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLFO_RS17595 6e0a1b7cbe997e8a7de2793525c646d3 304 SUPERFAMILY SSF56176 5 196 6.54E-47 T 25-04-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLFO_RS17595 6e0a1b7cbe997e8a7de2793525c646d3 304 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 304 91.943 T 25-04-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS17595 6e0a1b7cbe997e8a7de2793525c646d3 304 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 203 301 6.2E-30 T 25-04-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS17595 6e0a1b7cbe997e8a7de2793525c646d3 304 Pfam PF01565 FAD binding domain 38 167 6.5E-26 T 25-04-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CLFO_RS17595 6e0a1b7cbe997e8a7de2793525c646d3 304 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 25 302 8.8E-75 T 25-04-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS17595 6e0a1b7cbe997e8a7de2793525c646d3 304 Gene3D G3DSA:3.30.43.10 4 87 1.1E-28 T 25-04-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CLFO_RS17595 6e0a1b7cbe997e8a7de2793525c646d3 304 SUPERFAMILY SSF56194 199 303 6.8E-39 T 25-04-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS17595 6e0a1b7cbe997e8a7de2793525c646d3 304 Gene3D G3DSA:3.90.78.10 230 303 5.3E-33 T 25-04-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS12755 653ba0bac113ea518e3740a7cb4ca778 543 Gene3D G3DSA:3.30.450.20 10 119 4.3E-7 T 25-04-2017 CLFO_RS12755 653ba0bac113ea518e3740a7cb4ca778 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 522 1.0E-49 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS12755 653ba0bac113ea518e3740a7cb4ca778 543 SUPERFAMILY SSF103190 13 129 3.22E-7 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS12755 653ba0bac113ea518e3740a7cb4ca778 543 Gene3D G3DSA:1.10.287.950 282 499 2.8E-50 T 25-04-2017 CLFO_RS12755 653ba0bac113ea518e3740a7cb4ca778 543 SUPERFAMILY SSF58104 206 240 2.35E-63 T 25-04-2017 CLFO_RS12755 653ba0bac113ea518e3740a7cb4ca778 543 SUPERFAMILY SSF58104 273 541 2.35E-63 T 25-04-2017 CLFO_RS12755 653ba0bac113ea518e3740a7cb4ca778 543 SMART SM00283 267 542 8.3E-69 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS01485 c4379ea18e716a259f897ed4eec50608 350 Pfam PF13186 Iron-sulfur cluster-binding domain 256 325 2.8E-10 T 25-04-2017 IPR023885 4Fe4S-binding SPASM domain CLFO_RS01485 c4379ea18e716a259f897ed4eec50608 350 Pfam PF13353 4Fe-4S single cluster domain 66 168 9.6E-5 T 25-04-2017 CLFO_RS01485 c4379ea18e716a259f897ed4eec50608 350 Pfam PF04055 Radical SAM superfamily 62 205 5.3E-11 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS01485 c4379ea18e716a259f897ed4eec50608 350 Gene3D G3DSA:3.20.20.70 53 326 1.4E-37 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS01485 c4379ea18e716a259f897ed4eec50608 350 SUPERFAMILY SSF102114 54 326 5.49E-39 T 25-04-2017 CLFO_RS14695 98209e5c00287a696b765b49c0bca575 537 SUPERFAMILY SSF51735 10 315 2.44E-60 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14695 98209e5c00287a696b765b49c0bca575 537 SUPERFAMILY SSF48179 319 535 1.36E-38 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS14695 98209e5c00287a696b765b49c0bca575 537 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 240 474 5.9E-27 T 25-04-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CLFO_RS14695 98209e5c00287a696b765b49c0bca575 537 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 38 201 2.0E-14 T 25-04-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CLFO_RS14695 98209e5c00287a696b765b49c0bca575 537 Gene3D G3DSA:1.10.1040.10 319 536 9.4E-54 T 25-04-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLFO_RS14695 98209e5c00287a696b765b49c0bca575 537 Gene3D G3DSA:3.40.50.720 9 314 3.3E-75 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS11465 7305a8b16bfd46f0281336e09901ff41 149 Pfam PF01252 Signal peptidase (SPase) II 6 139 2.1E-38 T 25-04-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CLFO_RS11465 7305a8b16bfd46f0281336e09901ff41 149 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 44 52 1.1E-17 T 25-04-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CLFO_RS11465 7305a8b16bfd46f0281336e09901ff41 149 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 120 136 1.1E-17 T 25-04-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CLFO_RS11465 7305a8b16bfd46f0281336e09901ff41 149 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 88 103 1.1E-17 T 25-04-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CLFO_RS11465 7305a8b16bfd46f0281336e09901ff41 149 TIGRFAM TIGR00077 lspA: signal peptidase II 3 139 2.0E-35 T 25-04-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CLFO_RS11465 7305a8b16bfd46f0281336e09901ff41 149 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 145 16.636 T 25-04-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CLFO_RS11465 7305a8b16bfd46f0281336e09901ff41 149 ProSitePatterns PS00855 Signal peptidases II signature. 91 103 - T 25-04-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CLFO_RS05860 1319b3de4016ccafe261429264fbd08b 376 SMART SM00028 261 294 0.015 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS05860 1319b3de4016ccafe261429264fbd08b 376 SMART SM00028 295 328 4.3E-4 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS05860 1319b3de4016ccafe261429264fbd08b 376 SMART SM00028 329 362 0.017 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS05860 1319b3de4016ccafe261429264fbd08b 376 SMART SM00028 179 212 0.56 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS05860 1319b3de4016ccafe261429264fbd08b 376 Pfam PF13181 Tetratricopeptide repeat 330 362 0.0017 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS05860 1319b3de4016ccafe261429264fbd08b 376 Gene3D G3DSA:1.25.40.10 102 366 6.4E-38 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS05860 1319b3de4016ccafe261429264fbd08b 376 Pfam PF13424 Tetratricopeptide repeat 268 324 1.3E-7 T 25-04-2017 CLFO_RS05860 1319b3de4016ccafe261429264fbd08b 376 SUPERFAMILY SSF48452 84 227 1.33E-11 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS05860 1319b3de4016ccafe261429264fbd08b 376 SUPERFAMILY SSF48452 229 362 4.05E-25 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS04620 aafc0a8391fb189a83893f5abfb7a5e9 210 Pfam PF00436 Single-strand binding protein family 110 205 1.2E-15 T 25-04-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CLFO_RS04620 aafc0a8391fb189a83893f5abfb7a5e9 210 Gene3D G3DSA:2.40.50.140 93 208 1.6E-29 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS04620 aafc0a8391fb189a83893f5abfb7a5e9 210 SUPERFAMILY SSF50249 8 208 3.86E-35 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS10990 35b161861a6f616d6242591f112808df 161 Pfam PF03975 CheD chemotactic sensory transduction 48 153 1.5E-36 T 25-04-2017 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 CLFO_RS10990 35b161861a6f616d6242591f112808df 161 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 1 157 27.17 T 25-04-2017 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 CLFO_RS10990 35b161861a6f616d6242591f112808df 161 SUPERFAMILY SSF64438 4 159 5.58E-48 T 25-04-2017 IPR011324 Cytotoxic necrotizing factor-like, catalytic CLFO_RS15460 1ba38ca147df9436fe9ce342d2c0897b 267 SUPERFAMILY SSF81301 4 203 1.42E-55 T 25-04-2017 CLFO_RS15460 1ba38ca147df9436fe9ce342d2c0897b 267 SMART SM00954 45 168 1.8E-38 T 25-04-2017 IPR007685 RelA/SpoT GO:0015969 CLFO_RS15460 1ba38ca147df9436fe9ce342d2c0897b 267 Gene3D G3DSA:3.30.460.10 3 148 9.3E-37 T 25-04-2017 CLFO_RS15460 1ba38ca147df9436fe9ce342d2c0897b 267 Gene3D G3DSA:1.10.287.860 151 205 1.2E-23 T 25-04-2017 CLFO_RS15460 1ba38ca147df9436fe9ce342d2c0897b 267 Pfam PF04607 Region found in RelA / SpoT proteins 45 166 4.5E-34 T 25-04-2017 IPR007685 RelA/SpoT GO:0015969 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 SMART SM00228 327 399 2.0E-5 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 PRINTS PR00834 HtrA/DegQ protease family signature 212 236 3.7E-33 T 25-04-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 PRINTS PR00834 HtrA/DegQ protease family signature 357 369 3.7E-33 T 25-04-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 PRINTS PR00834 HtrA/DegQ protease family signature 172 192 3.7E-33 T 25-04-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 PRINTS PR00834 HtrA/DegQ protease family signature 251 268 3.7E-33 T 25-04-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 PRINTS PR00834 HtrA/DegQ protease family signature 273 290 3.7E-33 T 25-04-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 PRINTS PR00834 HtrA/DegQ protease family signature 149 161 3.7E-33 T 25-04-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 Gene3D G3DSA:2.40.10.10 99 206 1.1E-27 T 25-04-2017 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 Pfam PF13180 PDZ domain 339 408 4.2E-12 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 SUPERFAMILY SSF50494 105 311 2.75E-60 T 25-04-2017 IPR009003 Peptidase S1, PA clan CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 Pfam PF13365 Trypsin-like peptidase domain 140 280 2.6E-33 T 25-04-2017 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 Gene3D G3DSA:2.40.10.10 207 318 3.9E-42 T 25-04-2017 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 Gene3D G3DSA:2.30.42.10 319 408 2.9E-16 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS20965 4dfd4aecc77899161b16f03ff8a8e202 408 SUPERFAMILY SSF50156 297 407 4.86E-18 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS05365 b71c38bedfabaaa83536b0f5ec32bfbd 179 Pfam PF00156 Phosphoribosyl transferase domain 10 160 6.6E-27 T 25-04-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLFO_RS05365 b71c38bedfabaaa83536b0f5ec32bfbd 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 10 174 1.2E-60 T 25-04-2017 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CLFO_RS05365 b71c38bedfabaaa83536b0f5ec32bfbd 179 Gene3D G3DSA:3.40.50.2020 2 177 1.5E-71 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS05365 b71c38bedfabaaa83536b0f5ec32bfbd 179 SUPERFAMILY SSF53271 7 175 1.57E-53 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS16740 c88e5c714174468fab04ba0d253ca607 48 SUPERFAMILY SSF47240 2 47 1.62E-12 T 25-04-2017 IPR009078 Ferritin-like superfamily CLFO_RS16740 c88e5c714174468fab04ba0d253ca607 48 Gene3D G3DSA:1.20.1260.10 3 46 3.6E-14 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS16740 c88e5c714174468fab04ba0d253ca607 48 Pfam PF05067 Manganese containing catalase 2 45 1.8E-10 T 25-04-2017 IPR007760 Manganese catalase CLFO_RS18355 6022f8c66a1bc0829509427caf839d1f 403 Gene3D G3DSA:3.40.50.360 250 394 1.7E-43 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS18355 6022f8c66a1bc0829509427caf839d1f 403 ProSitePatterns PS00201 Flavodoxin signature. 256 272 - T 25-04-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CLFO_RS18355 6022f8c66a1bc0829509427caf839d1f 403 Gene3D G3DSA:3.60.15.10 2 246 3.9E-87 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS18355 6022f8c66a1bc0829509427caf839d1f 403 SUPERFAMILY SSF52218 254 398 2.95E-32 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS18355 6022f8c66a1bc0829509427caf839d1f 403 SMART SM00849 35 227 8.7E-25 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS18355 6022f8c66a1bc0829509427caf839d1f 403 PIRSF PIRSF005243 1 401 1.9E-135 T 25-04-2017 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CLFO_RS18355 6022f8c66a1bc0829509427caf839d1f 403 Pfam PF12724 Flavodoxin domain 256 365 1.2E-7 T 25-04-2017 IPR026816 Flavodoxin domain CLFO_RS18355 6022f8c66a1bc0829509427caf839d1f 403 Pfam PF00753 Metallo-beta-lactamase superfamily 35 177 1.9E-8 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS18355 6022f8c66a1bc0829509427caf839d1f 403 SUPERFAMILY SSF56281 5 284 1.96E-51 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS18075 0c1d0c97a59af1cdffc4b10adf252250 181 Pfam PF02417 Chromate transporter 5 169 3.0E-48 T 25-04-2017 IPR003370 Chromate transporter GO:0015109|GO:0015703 CLFO_RS00585 0a64b8ba73a15801ff51464169cd647a 92 Gene3D G3DSA:4.10.520.10 1 91 1.3E-35 T 25-04-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CLFO_RS00585 0a64b8ba73a15801ff51464169cd647a 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.5E-11 T 25-04-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 CLFO_RS00585 0a64b8ba73a15801ff51464169cd647a 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 7.5E-11 T 25-04-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 CLFO_RS00585 0a64b8ba73a15801ff51464169cd647a 92 SUPERFAMILY SSF47729 1 91 8.39E-30 T 25-04-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CLFO_RS00585 0a64b8ba73a15801ff51464169cd647a 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 25-04-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CLFO_RS00585 0a64b8ba73a15801ff51464169cd647a 92 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.5E-33 T 25-04-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 CLFO_RS00585 0a64b8ba73a15801ff51464169cd647a 92 SMART SM00411 1 91 5.0E-39 T 25-04-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 CLFO_RS18395 c42b9b22253842e9745abe361454c43e 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 301 407 1.6E-17 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18395 c42b9b22253842e9745abe361454c43e 412 Gene3D G3DSA:3.30.565.10 196 237 1.4E-27 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18395 c42b9b22253842e9745abe361454c43e 412 Gene3D G3DSA:3.30.565.10 289 407 1.4E-27 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18395 c42b9b22253842e9745abe361454c43e 412 SUPERFAMILY SSF55874 276 407 6.42E-29 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18395 c42b9b22253842e9745abe361454c43e 412 SMART SM00387 297 409 8.9E-21 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18395 c42b9b22253842e9745abe361454c43e 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 387 3.6E-10 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18395 c42b9b22253842e9745abe361454c43e 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 362 3.6E-10 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18395 c42b9b22253842e9745abe361454c43e 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 348 3.6E-10 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18395 c42b9b22253842e9745abe361454c43e 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 406 3.6E-10 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS14315 5d0b9279bcb6544baddc5532599f259a 340 SUPERFAMILY SSF100950 91 337 1.9E-61 T 25-04-2017 CLFO_RS14315 5d0b9279bcb6544baddc5532599f259a 340 Gene3D G3DSA:3.40.50.1360 97 338 5.9E-79 T 25-04-2017 CLFO_RS14315 5d0b9279bcb6544baddc5532599f259a 340 SUPERFAMILY SSF46785 19 84 4.85E-12 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS14315 5d0b9279bcb6544baddc5532599f259a 340 Pfam PF04198 Putative sugar-binding domain 93 337 3.0E-61 T 25-04-2017 IPR007324 Sugar-binding domain, putative GO:0030246 CLFO_RS14315 5d0b9279bcb6544baddc5532599f259a 340 Gene3D G3DSA:1.10.10.10 1 95 8.5E-30 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 SUPERFAMILY SSF48239 508 686 4.26E-17 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 Pfam PF14478 Domain of unknown function (DUF4430) 112 182 1.8E-5 T 25-04-2017 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 SMART SM00564 1877 1913 860.0 T 25-04-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 SMART SM00564 1794 1824 0.36 T 25-04-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 SMART SM00564 1933 1974 130.0 T 25-04-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 SMART SM00564 1836 1868 480.0 T 25-04-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 Pfam PF13306 Leucine rich repeats (6 copies) 1161 1275 1.6E-24 T 25-04-2017 IPR026906 Leucine rich repeat 5 CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 Gene3D G3DSA:1.50.10.20 509 661 2.3E-16 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 SUPERFAMILY SSF50998 1743 2152 3.27E-22 T 25-04-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 Pfam PF00395 S-layer homology domain 2918 2960 1.8E-13 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 Pfam PF00395 S-layer homology domain 3038 3078 2.3E-11 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 Pfam PF00395 S-layer homology domain 2977 3018 6.1E-14 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS02630 5ee15205b0c84da1aefb876fd2c3f696 3087 Gene3D G3DSA:2.140.10.10 1743 2156 6.1E-42 T 25-04-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain CLFO_RS15930 19e22cb467b4504af2c37e7cebbc0382 261 SUPERFAMILY SSF52540 4 251 4.37E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15930 19e22cb467b4504af2c37e7cebbc0382 261 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15930 19e22cb467b4504af2c37e7cebbc0382 261 Pfam PF00005 ABC transporter 22 180 7.6E-30 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15930 19e22cb467b4504af2c37e7cebbc0382 261 Gene3D G3DSA:3.40.50.300 2 255 3.4E-73 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15930 19e22cb467b4504af2c37e7cebbc0382 261 SMART SM00382 30 229 6.7E-19 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS01410 a23d63bf418d6a665595798aca787a55 353 Gene3D G3DSA:3.40.47.10 170 192 1.1E-39 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS01410 a23d63bf418d6a665595798aca787a55 353 Gene3D G3DSA:3.40.47.10 229 340 1.1E-39 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS01410 a23d63bf418d6a665595798aca787a55 353 SUPERFAMILY SSF53901 7 339 3.89E-45 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS01410 a23d63bf418d6a665595798aca787a55 353 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 115 191 8.5E-19 T 25-04-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLFO_RS01410 a23d63bf418d6a665595798aca787a55 353 Gene3D G3DSA:3.40.47.10 8 169 2.9E-41 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS01410 a23d63bf418d6a665595798aca787a55 353 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 256 339 9.5E-21 T 25-04-2017 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLFO_RS15335 e8b40f5fbf1dff12c340ee174429e83a 369 Pfam PF00266 Aminotransferase class-V 2 360 5.1E-86 T 25-04-2017 IPR000192 Aminotransferase class V domain CLFO_RS15335 e8b40f5fbf1dff12c340ee174429e83a 369 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 25-04-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLFO_RS15335 e8b40f5fbf1dff12c340ee174429e83a 369 SUPERFAMILY SSF53383 1 369 9.87E-109 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS15335 e8b40f5fbf1dff12c340ee174429e83a 369 Gene3D G3DSA:3.40.640.10 14 247 2.4E-91 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS15335 e8b40f5fbf1dff12c340ee174429e83a 369 Gene3D G3DSA:3.90.1150.10 248 367 8.2E-42 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS15335 e8b40f5fbf1dff12c340ee174429e83a 369 PIRSF PIRSF005572 1 369 3.1E-134 T 25-04-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CLFO_RS15395 5e34cdb1413dd468cafaeee99d689432 227 Pfam PF05908 Poly-gamma-glutamate hydrolase 38 209 4.9E-61 T 25-04-2017 IPR008585 Poly-gamma-glutamate hydrolase CLFO_RS18095 1b3562f5fb46d661da031680399b8ad8 160 Gene3D G3DSA:1.10.10.10 1 57 3.5E-9 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18095 1b3562f5fb46d661da031680399b8ad8 160 Pfam PF13404 AsnC-type helix-turn-helix domain 3 45 1.3E-7 T 25-04-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLFO_RS10615 fd5a5f68441d3edf04c188ad87132483 85 SUPERFAMILY SSF47413 6 76 2.82E-11 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS10615 fd5a5f68441d3edf04c188ad87132483 85 Gene3D G3DSA:1.10.260.40 5 70 1.8E-9 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS10615 fd5a5f68441d3edf04c188ad87132483 85 Pfam PF01381 Helix-turn-helix 13 61 3.8E-8 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS10615 fd5a5f68441d3edf04c188ad87132483 85 SMART SM00530 10 65 4.3E-5 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS12080 49f5cf9f5b264fc648ebeb0fc0c1fe90 275 SUPERFAMILY SSF52096 40 266 1.03E-74 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS12080 49f5cf9f5b264fc648ebeb0fc0c1fe90 275 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 268 36.167 T 25-04-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12080 49f5cf9f5b264fc648ebeb0fc0c1fe90 275 Gene3D G3DSA:3.90.226.10 40 266 5.4E-73 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS12080 49f5cf9f5b264fc648ebeb0fc0c1fe90 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 238 247 1.8E-38 T 25-04-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12080 49f5cf9f5b264fc648ebeb0fc0c1fe90 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 187 204 1.8E-38 T 25-04-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12080 49f5cf9f5b264fc648ebeb0fc0c1fe90 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 116 130 1.8E-38 T 25-04-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12080 49f5cf9f5b264fc648ebeb0fc0c1fe90 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 150 168 1.8E-38 T 25-04-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12080 49f5cf9f5b264fc648ebeb0fc0c1fe90 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 216 227 1.8E-38 T 25-04-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12080 49f5cf9f5b264fc648ebeb0fc0c1fe90 275 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 47 267 2.4E-102 T 25-04-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 CLFO_RS12080 49f5cf9f5b264fc648ebeb0fc0c1fe90 275 Pfam PF01039 Carboxyl transferase domain 49 226 4.7E-20 T 25-04-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS08345 2fd8152584375d148c902edf8072f475 142 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 25-04-2017 IPR030489 Transcription regulator Rrf2-type, conserved site CLFO_RS08345 2fd8152584375d148c902edf8072f475 142 Gene3D G3DSA:1.10.10.10 1 137 1.4E-30 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS08345 2fd8152584375d148c902edf8072f475 142 Pfam PF02082 Transcriptional regulator 1 83 2.2E-25 T 25-04-2017 IPR000944 Transcription regulator Rrf2-type CLFO_RS08345 2fd8152584375d148c902edf8072f475 142 SUPERFAMILY SSF46785 2 135 1.6E-29 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS08345 2fd8152584375d148c902edf8072f475 142 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 5.4E-33 T 25-04-2017 IPR000944 Transcription regulator Rrf2-type CLFO_RS16330 d8cf15b48f2a761abc709516ae0311e8 127 Pfam PF02001 Protein of unknown function DUF134 3 95 7.7E-20 T 25-04-2017 IPR002852 Uncharacterised protein family UPF0251 CLFO_RS16330 d8cf15b48f2a761abc709516ae0311e8 127 Hamap MF_00674 UPF0251 protein . 2 98 21.119 T 25-04-2017 IPR002852 Uncharacterised protein family UPF0251 CLFO_RS16330 d8cf15b48f2a761abc709516ae0311e8 127 Gene3D G3DSA:1.10.10.10 40 81 2.4E-7 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16330 d8cf15b48f2a761abc709516ae0311e8 127 SUPERFAMILY SSF88659 40 82 5.23E-8 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS04050 dfc98386a1eba9f58213495258c0d0bc 274 SUPERFAMILY SSF161098 76 257 1.83E-27 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04050 dfc98386a1eba9f58213495258c0d0bc 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 265 8.1E-22 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04050 dfc98386a1eba9f58213495258c0d0bc 274 Gene3D G3DSA:1.10.3720.10 74 269 3.9E-20 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS00020 7251c57585cfc351406470375aa548c7 370 Gene3D G3DSA:3.40.50.300 236 341 2.9E-41 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00020 7251c57585cfc351406470375aa548c7 370 Gene3D G3DSA:3.40.50.300 2 166 2.9E-41 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00020 7251c57585cfc351406470375aa548c7 370 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 370 95.776 T 25-04-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CLFO_RS00020 7251c57585cfc351406470375aa548c7 370 SUPERFAMILY SSF52540 1 214 2.82E-37 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00020 7251c57585cfc351406470375aa548c7 370 SUPERFAMILY SSF52540 241 346 2.82E-37 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00020 7251c57585cfc351406470375aa548c7 370 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 25-04-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CLFO_RS00020 7251c57585cfc351406470375aa548c7 370 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 363 3.2E-109 T 25-04-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CLFO_RS00020 7251c57585cfc351406470375aa548c7 370 ProSitePatterns PS00618 RecF protein signature 2. 309 327 - T 25-04-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CLFO_RS00020 7251c57585cfc351406470375aa548c7 370 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 359 4.6E-17 T 25-04-2017 IPR003395 RecF/RecN/SMC, N-terminal CLFO_RS04225 230437f1b53b1dade3483e3032dc2510 87 Pfam PF07875 Coat F domain 2 62 6.9E-21 T 25-04-2017 IPR012851 Spore coat protein CotF-like CLFO_RS02440 b291d193d50370c79453f965cdd5f8df 126 Gene3D G3DSA:3.10.120.10 50 108 9.4E-16 T 25-04-2017 IPR001199 Cytochrome b5-like heme/steroid binding domain CLFO_RS02440 b291d193d50370c79453f965cdd5f8df 126 Pfam PF00173 Cytochrome b5-like Heme/Steroid binding domain 54 124 4.0E-12 T 25-04-2017 IPR001199 Cytochrome b5-like heme/steroid binding domain CLFO_RS02440 b291d193d50370c79453f965cdd5f8df 126 SUPERFAMILY SSF55856 49 114 4.71E-15 T 25-04-2017 IPR001199 Cytochrome b5-like heme/steroid binding domain CLFO_RS02440 b291d193d50370c79453f965cdd5f8df 126 SMART SM01117 53 125 1.4E-12 T 25-04-2017 IPR001199 Cytochrome b5-like heme/steroid binding domain CLFO_RS13040 80f9999ac4ba6343d7e62a5238c6e595 175 Pfam PF10050 Predicted metal-binding protein (DUF2284) 17 174 1.7E-42 T 25-04-2017 IPR019271 Protein of unknown function DUF2284, metal-binding CLFO_RS19375 d72031391d4e7c77eae9a9dfb82b57ea 226 Gene3D G3DSA:3.30.240.20 166 223 2.2E-17 T 25-04-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLFO_RS19375 d72031391d4e7c77eae9a9dfb82b57ea 226 Pfam PF04239 Protein of unknown function (DUF421) 86 201 8.8E-34 T 25-04-2017 IPR007353 Protein of unknown function DUF421 CLFO_RS19375 d72031391d4e7c77eae9a9dfb82b57ea 226 Gene3D G3DSA:3.30.240.20 76 150 3.6E-27 T 25-04-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLFO_RS06095 57d5120d944da93092f4effb83f2dac0 142 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 138 3.4E-28 T 25-04-2017 IPR007359 Positive regulator of sigma(E), RseC/MucC CLFO_RS06095 57d5120d944da93092f4effb83f2dac0 142 PIRSF PIRSF004923 1 142 2.8E-23 T 25-04-2017 IPR026268 Protein RseC CLFO_RS16570 78d351aba8f779ab8c4601f5725f1a9b 88 Gene3D G3DSA:1.10.10.10 4 87 9.9E-6 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS02590 ce51f9387096cb78091158201481ab2c 347 Gene3D G3DSA:3.30.450.20 207 342 1.2E-30 T 25-04-2017 CLFO_RS02590 ce51f9387096cb78091158201481ab2c 347 SMART SM00086 295 338 3.0E-5 T 25-04-2017 IPR001610 PAC motif CLFO_RS02590 ce51f9387096cb78091158201481ab2c 347 SMART SM00091 220 288 0.0032 T 25-04-2017 IPR000014 PAS domain CLFO_RS02590 ce51f9387096cb78091158201481ab2c 347 Pfam PF08447 PAS fold 243 331 2.8E-22 T 25-04-2017 IPR013655 PAS fold-3 GO:0005515 CLFO_RS02590 ce51f9387096cb78091158201481ab2c 347 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 216 344 6.8E-12 T 25-04-2017 IPR000014 PAS domain CLFO_RS02590 ce51f9387096cb78091158201481ab2c 347 Pfam PF10114 Sensory domain found in PocR 8 168 8.6E-48 T 25-04-2017 IPR018771 PocR domain CLFO_RS02590 ce51f9387096cb78091158201481ab2c 347 SUPERFAMILY SSF55785 227 338 5.58E-21 T 25-04-2017 IPR000014 PAS domain CLFO_RS04210 17bf0c685845ed83ff0c355402d3eb06 323 SUPERFAMILY SSF53686 3 310 8.64E-77 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS04210 17bf0c685845ed83ff0c355402d3eb06 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 303 4.2E-66 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS04210 17bf0c685845ed83ff0c355402d3eb06 323 Gene3D G3DSA:3.40.50.1100 68 320 5.8E-55 T 25-04-2017 CLFO_RS16140 a96cc8e7e8acc13fc7ea418ebec67f86 332 SUPERFAMILY SSF53822 61 331 4.04E-79 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS16140 a96cc8e7e8acc13fc7ea418ebec67f86 332 SUPERFAMILY SSF47413 1 60 5.36E-18 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS16140 a96cc8e7e8acc13fc7ea418ebec67f86 332 Gene3D G3DSA:1.10.260.40 3 53 6.3E-24 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS16140 a96cc8e7e8acc13fc7ea418ebec67f86 332 Pfam PF13377 Periplasmic binding protein-like domain 167 331 1.2E-34 T 25-04-2017 CLFO_RS16140 a96cc8e7e8acc13fc7ea418ebec67f86 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 25-04-2017 CLFO_RS16140 a96cc8e7e8acc13fc7ea418ebec67f86 332 Gene3D G3DSA:3.40.50.2300 54 171 5.7E-47 T 25-04-2017 CLFO_RS16140 a96cc8e7e8acc13fc7ea418ebec67f86 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.4E-5 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS16140 a96cc8e7e8acc13fc7ea418ebec67f86 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.4E-5 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS16140 a96cc8e7e8acc13fc7ea418ebec67f86 332 SMART SM00354 1 71 4.8E-30 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS16140 a96cc8e7e8acc13fc7ea418ebec67f86 332 Gene3D G3DSA:3.40.50.2300 172 309 1.7E-48 T 25-04-2017 CLFO_RS16140 a96cc8e7e8acc13fc7ea418ebec67f86 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.1E-18 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS00510 6a44353e397fd45e7e1b7d11af1a5248 488 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 223 237 - T 25-04-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CLFO_RS00510 6a44353e397fd45e7e1b7d11af1a5248 488 Gene3D G3DSA:3.90.1150.10 324 412 8.9E-14 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS00510 6a44353e397fd45e7e1b7d11af1a5248 488 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 383 467 1.1E-10 T 25-04-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLFO_RS00510 6a44353e397fd45e7e1b7d11af1a5248 488 Gene3D G3DSA:3.40.640.10 9 284 5.3E-100 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS00510 6a44353e397fd45e7e1b7d11af1a5248 488 Gene3D G3DSA:3.90.100.10 413 485 1.2E-26 T 25-04-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLFO_RS00510 6a44353e397fd45e7e1b7d11af1a5248 488 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 9 370 4.6E-83 T 25-04-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CLFO_RS00510 6a44353e397fd45e7e1b7d11af1a5248 488 SUPERFAMILY SSF53383 9 389 3.28E-95 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS01815 8083803a2dd18f83f461435f5483d21e 322 Gene3D G3DSA:3.30.2010.10 79 163 2.0E-21 T 25-04-2017 CLFO_RS01815 8083803a2dd18f83f461435f5483d21e 322 Pfam PF01435 Peptidase family M48 81 274 3.8E-22 T 25-04-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CLFO_RS10620 5c802fdfad9b7bf864152f1c022c3bdc 212 SUPERFAMILY SSF51306 84 208 7.15E-32 T 25-04-2017 IPR015927 Peptidase S24/S26A/S26B/S26C CLFO_RS10620 5c802fdfad9b7bf864152f1c022c3bdc 212 Gene3D G3DSA:1.10.260.40 4 68 2.4E-22 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS10620 5c802fdfad9b7bf864152f1c022c3bdc 212 Pfam PF01381 Helix-turn-helix 11 66 2.3E-15 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS10620 5c802fdfad9b7bf864152f1c022c3bdc 212 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 160 172 2.9E-6 T 25-04-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLFO_RS10620 5c802fdfad9b7bf864152f1c022c3bdc 212 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 120 130 2.9E-6 T 25-04-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLFO_RS10620 5c802fdfad9b7bf864152f1c022c3bdc 212 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 131 142 2.9E-6 T 25-04-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLFO_RS10620 5c802fdfad9b7bf864152f1c022c3bdc 212 Pfam PF00717 Peptidase S24-like 123 189 1.6E-15 T 25-04-2017 IPR019759 Peptidase S24/S26A/S26B CLFO_RS10620 5c802fdfad9b7bf864152f1c022c3bdc 212 SUPERFAMILY SSF47413 3 69 4.29E-17 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS10620 5c802fdfad9b7bf864152f1c022c3bdc 212 Gene3D G3DSA:2.10.109.10 85 208 1.9E-36 T 25-04-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain CLFO_RS10620 5c802fdfad9b7bf864152f1c022c3bdc 212 TIGRFAM TIGR00498 lexA: repressor LexA 81 208 1.0E-32 T 25-04-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CLFO_RS10620 5c802fdfad9b7bf864152f1c022c3bdc 212 SMART SM00530 10 66 4.1E-14 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS18220 12488bab9d163554604082ea6be3b1dc 385 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 4 378 3.8E-97 T 25-04-2017 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLFO_RS18220 12488bab9d163554604082ea6be3b1dc 385 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 210 376 6.5E-32 T 25-04-2017 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLFO_RS10180 4d4053e1c45d437c53ee35ec05dce472 281 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 2 86 8.8E-10 T 25-04-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLFO_RS10180 4d4053e1c45d437c53ee35ec05dce472 281 Pfam PF00589 Phage integrase family 121 270 9.1E-36 T 25-04-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS10180 4d4053e1c45d437c53ee35ec05dce472 281 Gene3D G3DSA:1.10.443.10 111 276 7.8E-44 T 25-04-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS10180 4d4053e1c45d437c53ee35ec05dce472 281 SUPERFAMILY SSF56349 3 278 5.59E-46 T 25-04-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLFO_RS10180 4d4053e1c45d437c53ee35ec05dce472 281 Gene3D G3DSA:1.10.150.130 2 88 5.4E-11 T 25-04-2017 IPR023109 Integrase/recombinase, N-terminal CLFO_RS00655 ef2a344e5c838ee6007a0d1e9cf8ae9e 532 TIGRFAM TIGR00337 PyrG: CTP synthase 2 528 3.0E-262 T 25-04-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CLFO_RS00655 ef2a344e5c838ee6007a0d1e9cf8ae9e 532 Pfam PF00117 Glutamine amidotransferase class-I 303 528 2.2E-61 T 25-04-2017 IPR017926 Glutamine amidotransferase CLFO_RS00655 ef2a344e5c838ee6007a0d1e9cf8ae9e 532 Gene3D G3DSA:3.40.50.880 289 531 1.0E-106 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS00655 ef2a344e5c838ee6007a0d1e9cf8ae9e 532 Pfam PF06418 CTP synthase N-terminus 4 268 8.5E-131 T 25-04-2017 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CLFO_RS00655 ef2a344e5c838ee6007a0d1e9cf8ae9e 532 Hamap MF_01227 CTP synthase [pyrG]. 3 532 53.032 T 25-04-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CLFO_RS00655 ef2a344e5c838ee6007a0d1e9cf8ae9e 532 Gene3D G3DSA:3.40.50.300 1 284 6.7E-141 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00655 ef2a344e5c838ee6007a0d1e9cf8ae9e 532 SUPERFAMILY SSF52540 3 271 1.06E-126 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00655 ef2a344e5c838ee6007a0d1e9cf8ae9e 532 SUPERFAMILY SSF52317 290 530 3.32E-88 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS02125 59ddd31cbe0178c93e0fd582e26278b0 585 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 40 116 6.2E-10 T 25-04-2017 CLFO_RS02125 59ddd31cbe0178c93e0fd582e26278b0 585 Gene3D G3DSA:3.40.30.10 39 136 7.7E-34 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS02125 59ddd31cbe0178c93e0fd582e26278b0 585 SUPERFAMILY SSF142984 387 470 2.88E-27 T 25-04-2017 CLFO_RS02125 59ddd31cbe0178c93e0fd582e26278b0 585 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 194 365 2.3E-48 T 25-04-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS02125 59ddd31cbe0178c93e0fd582e26278b0 585 Pfam PF10531 SLBB domain 389 437 1.2E-8 T 25-04-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS02125 59ddd31cbe0178c93e0fd582e26278b0 585 SMART SM00928 475 520 2.6E-21 T 25-04-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS02125 59ddd31cbe0178c93e0fd582e26278b0 585 SUPERFAMILY SSF52833 40 130 2.8E-24 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS02125 59ddd31cbe0178c93e0fd582e26278b0 585 SUPERFAMILY SSF140490 471 572 7.06E-36 T 25-04-2017 CLFO_RS02125 59ddd31cbe0178c93e0fd582e26278b0 585 SUPERFAMILY SSF142019 146 386 1.28E-94 T 25-04-2017 CLFO_RS02125 59ddd31cbe0178c93e0fd582e26278b0 585 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 488 499 - T 25-04-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS02125 59ddd31cbe0178c93e0fd582e26278b0 585 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 478 560 4.0E-31 T 25-04-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS14915 eeca78313f118d1d5afc6f8ba30f74f2 346 Pfam PF02678 Pirin 61 140 2.1E-25 T 25-04-2017 IPR003829 Pirin, N-terminal domain CLFO_RS14915 eeca78313f118d1d5afc6f8ba30f74f2 346 Gene3D G3DSA:2.60.120.10 54 282 4.1E-59 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS14915 eeca78313f118d1d5afc6f8ba30f74f2 346 SUPERFAMILY SSF51182 66 316 1.31E-57 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS14915 eeca78313f118d1d5afc6f8ba30f74f2 346 Pfam PF05726 Pirin C-terminal cupin domain 207 309 1.0E-22 T 25-04-2017 IPR008778 Pirin, C-terminal domain CLFO_RS05215 40a2cde565861c8f890daf2e6da28a0e 377 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 7 338 9.7E-98 T 25-04-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CLFO_RS05215 40a2cde565861c8f890daf2e6da28a0e 377 Gene3D G3DSA:1.25.10.10 265 326 9.4E-6 T 25-04-2017 IPR011989 Armadillo-like helical CLFO_RS05215 40a2cde565861c8f890daf2e6da28a0e 377 Gene3D G3DSA:1.25.10.10 327 371 3.5E-4 T 25-04-2017 IPR011989 Armadillo-like helical CLFO_RS05215 40a2cde565861c8f890daf2e6da28a0e 377 Gene3D G3DSA:1.10.1060.10 172 253 1.3E-7 T 25-04-2017 CLFO_RS05215 40a2cde565861c8f890daf2e6da28a0e 377 SUPERFAMILY SSF48371 299 356 6.91E-6 T 25-04-2017 IPR016024 Armadillo-type fold GO:0005488 CLFO_RS05215 40a2cde565861c8f890daf2e6da28a0e 377 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 186 197 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS05215 40a2cde565861c8f890daf2e6da28a0e 377 Pfam PF08331 Domain of unknown function (DUF1730) 54 132 1.9E-19 T 25-04-2017 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 CLFO_RS05215 40a2cde565861c8f890daf2e6da28a0e 377 Pfam PF13484 4Fe-4S double cluster binding domain 186 248 1.2E-14 T 25-04-2017 CLFO_RS05215 40a2cde565861c8f890daf2e6da28a0e 377 SUPERFAMILY SSF54862 184 254 1.13E-10 T 25-04-2017 CLFO_RS02220 d51737109ba209828ba19bdb2b365319 190 Gene3D G3DSA:1.10.1740.10 21 109 8.4E-20 T 25-04-2017 CLFO_RS02220 d51737109ba209828ba19bdb2b365319 190 Gene3D G3DSA:1.10.10.10 125 186 1.8E-11 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS02220 d51737109ba209828ba19bdb2b365319 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 184 1.5E-33 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS02220 d51737109ba209828ba19bdb2b365319 190 Pfam PF08281 Sigma-70, region 4 129 180 1.1E-8 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS02220 d51737109ba209828ba19bdb2b365319 190 SUPERFAMILY SSF88659 114 186 6.17E-16 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS02220 d51737109ba209828ba19bdb2b365319 190 SUPERFAMILY SSF88946 21 101 4.71E-20 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS02220 d51737109ba209828ba19bdb2b365319 190 Pfam PF04542 Sigma-70 region 2 29 95 5.8E-15 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS19655 c29c399bd5eb238a034153fd4953e3c3 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.687 T 25-04-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLFO_RS19655 c29c399bd5eb238a034153fd4953e3c3 122 SMART SM01374 1 122 3.4E-86 T 25-04-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLFO_RS19655 c29c399bd5eb238a034153fd4953e3c3 122 Gene3D G3DSA:2.40.150.20 1 122 4.6E-54 T 25-04-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLFO_RS19655 c29c399bd5eb238a034153fd4953e3c3 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.5E-55 T 25-04-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLFO_RS19655 c29c399bd5eb238a034153fd4953e3c3 122 SUPERFAMILY SSF50193 1 122 4.06E-51 T 25-04-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CLFO_RS19655 c29c399bd5eb238a034153fd4953e3c3 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.9E-57 T 25-04-2017 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CLFO_RS19655 c29c399bd5eb238a034153fd4953e3c3 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 25-04-2017 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 ProSitePatterns PS01128 Shikimate kinase signature. 146 171 - T 25-04-2017 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 Gene3D G3DSA:3.40.50.300 73 104 3.2E-4 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 Gene3D G3DSA:1.20.59.10 2 72 1.0E-23 T 25-04-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 SUPERFAMILY SSF48600 2 82 2.59E-20 T 25-04-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 PRINTS PR01100 Shikimate kinase family signature 93 108 1.7E-15 T 25-04-2017 CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 PRINTS PR01100 Shikimate kinase family signature 184 201 1.7E-15 T 25-04-2017 CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 PRINTS PR01100 Shikimate kinase family signature 145 153 1.7E-15 T 25-04-2017 CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 PRINTS PR01100 Shikimate kinase family signature 163 172 1.7E-15 T 25-04-2017 CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 PRINTS PR01100 Shikimate kinase family signature 117 130 1.7E-15 T 25-04-2017 CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 Hamap MF_00109 Shikimate kinase [aroK]. 90 256 27.236 T 25-04-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 Gene3D G3DSA:3.40.50.300 105 255 2.5E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 TIGRFAM TIGR01805 CM_mono_grmpos: chorismate mutase 4 84 5.2E-23 T 25-04-2017 IPR011279 Chorismate mutase, Gram-positive CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 Pfam PF01817 Chorismate mutase type II 8 84 1.4E-21 T 25-04-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 Pfam PF01202 Shikimate kinase 99 255 9.9E-47 T 25-04-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 SUPERFAMILY SSF52540 90 254 8.19E-28 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02305 91c67d347c2cae35ba7d65b73650af45 259 SMART SM00830 8 87 6.8E-23 T 25-04-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CLFO_RS11800 e81989577bfa048f43af92d3d510bc3f 348 Gene3D G3DSA:3.40.1350.10 125 247 2.5E-5 T 25-04-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 CLFO_RS11800 e81989577bfa048f43af92d3d510bc3f 348 Pfam PF04471 Restriction endonuclease 137 245 6.6E-10 T 25-04-2017 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 CLFO_RS02580 3bd47031cf0d1031ba40f4c6b6be5f93 435 SUPERFAMILY SSF52777 215 435 3.11E-81 T 25-04-2017 CLFO_RS02580 3bd47031cf0d1031ba40f4c6b6be5f93 435 Gene3D G3DSA:3.30.559.10 214 435 2.7E-82 T 25-04-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 CLFO_RS02580 3bd47031cf0d1031ba40f4c6b6be5f93 435 Pfam PF00364 Biotin-requiring enzyme 4 76 5.2E-16 T 25-04-2017 IPR000089 Biotin/lipoyl attachment CLFO_RS02580 3bd47031cf0d1031ba40f4c6b6be5f93 435 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 214 434 2.8E-82 T 25-04-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CLFO_RS02580 3bd47031cf0d1031ba40f4c6b6be5f93 435 SUPERFAMILY SSF47005 116 160 2.75E-13 T 25-04-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CLFO_RS02580 3bd47031cf0d1031ba40f4c6b6be5f93 435 Gene3D G3DSA:4.10.320.10 165 204 1.2E-7 T 25-04-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CLFO_RS02580 3bd47031cf0d1031ba40f4c6b6be5f93 435 Gene3D G3DSA:4.10.320.10 117 164 6.2E-21 T 25-04-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CLFO_RS02580 3bd47031cf0d1031ba40f4c6b6be5f93 435 SUPERFAMILY SSF51230 2 88 1.15E-21 T 25-04-2017 IPR011053 Single hybrid motif CLFO_RS02580 3bd47031cf0d1031ba40f4c6b6be5f93 435 Gene3D G3DSA:2.40.50.100 1 91 4.6E-26 T 25-04-2017 CLFO_RS02580 3bd47031cf0d1031ba40f4c6b6be5f93 435 Pfam PF02817 e3 binding domain 121 156 3.3E-16 T 25-04-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CLFO_RS11030 6a1bece288e9e539c605871b38c575d0 675 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 25-04-2017 IPR025505 FHIPEP conserved site CLFO_RS11030 6a1bece288e9e539c605871b38c575d0 675 Pfam PF00771 FHIPEP family 15 665 1.2E-272 T 25-04-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLFO_RS11030 6a1bece288e9e539c605871b38c575d0 675 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 5 673 2.3E-266 T 25-04-2017 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CLFO_RS11030 6a1bece288e9e539c605871b38c575d0 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 4.6E-56 T 25-04-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLFO_RS11030 6a1bece288e9e539c605871b38c575d0 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 4.6E-56 T 25-04-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLFO_RS11030 6a1bece288e9e539c605871b38c575d0 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 4.6E-56 T 25-04-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLFO_RS11030 6a1bece288e9e539c605871b38c575d0 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 4.6E-56 T 25-04-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLFO_RS11030 6a1bece288e9e539c605871b38c575d0 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 4.6E-56 T 25-04-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLFO_RS11030 6a1bece288e9e539c605871b38c575d0 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 221 235 4.6E-56 T 25-04-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLFO_RS11030 6a1bece288e9e539c605871b38c575d0 675 PIRSF PIRSF005419 1 675 2.0E-260 T 25-04-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 Gene3D G3DSA:1.25.40.10 230 286 3.2E-12 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 Gene3D G3DSA:1.25.40.10 129 229 2.0E-31 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 Gene3D G3DSA:1.25.40.10 12 128 4.7E-28 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 Pfam PF13181 Tetratricopeptide repeat 148 177 0.008 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 Pfam PF13181 Tetratricopeptide repeat 250 280 7.3E-4 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 Pfam PF13181 Tetratricopeptide repeat 216 245 2.4E-4 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 Pfam PF13181 Tetratricopeptide repeat 113 144 2.3E-8 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 Pfam PF00515 Tetratricopeptide repeat 181 213 2.2E-7 T 25-04-2017 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 Pfam PF00515 Tetratricopeptide repeat 78 110 1.5E-7 T 25-04-2017 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 SUPERFAMILY SSF48452 17 284 1.74E-44 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 SMART SM00671 112 143 62.0 T 25-04-2017 IPR006597 Sel1-like repeat CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 SMART SM00671 214 245 87.0 T 25-04-2017 IPR006597 Sel1-like repeat CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 SMART SM00671 78 109 4.0 T 25-04-2017 IPR006597 Sel1-like repeat CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 SMART SM00028 44 77 1.2E-4 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 SMART SM00028 248 281 0.0028 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 SMART SM00028 180 213 6.8E-6 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 SMART SM00028 112 145 3.7E-6 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 SMART SM00028 78 111 2.3E-5 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 SMART SM00028 146 179 0.096 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 SMART SM00028 214 247 0.043 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 SMART SM00028 8 41 57.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15560 041dc184393ffd8293690b7c8a49497a 304 Pfam PF07719 Tetratricopeptide repeat 45 76 5.2E-6 T 25-04-2017 IPR013105 Tetratricopeptide repeat 2 CLFO_RS04190 6fe93047b9b61612f163d88a36886c1f 170 Pfam PF00210 Ferritin-like domain 8 144 2.6E-40 T 25-04-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CLFO_RS04190 6fe93047b9b61612f163d88a36886c1f 170 Gene3D G3DSA:1.20.1260.10 1 165 3.7E-57 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS04190 6fe93047b9b61612f163d88a36886c1f 170 SUPERFAMILY SSF47240 1 161 8.35E-55 T 25-04-2017 IPR009078 Ferritin-like superfamily CLFO_RS08355 fe01431357e41c7fb459af834f4975b3 148 Gene3D G3DSA:3.30.70.20 67 100 2.3E-9 T 25-04-2017 CLFO_RS08355 fe01431357e41c7fb459af834f4975b3 148 Gene3D G3DSA:3.30.70.20 101 145 3.9E-10 T 25-04-2017 CLFO_RS08355 fe01431357e41c7fb459af834f4975b3 148 SUPERFAMILY SSF54862 4 143 2.85E-31 T 25-04-2017 CLFO_RS08355 fe01431357e41c7fb459af834f4975b3 148 Pfam PF13247 4Fe-4S dicluster domain 58 144 7.7E-20 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS08355 fe01431357e41c7fb459af834f4975b3 148 Gene3D G3DSA:3.30.70.20 4 66 1.4E-10 T 25-04-2017 CLFO_RS08355 fe01431357e41c7fb459af834f4975b3 148 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 94 105 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS13885 7ba3feb30451e752fd5ba436d8e4d119 128 SUPERFAMILY SSF46785 6 123 1.84E-33 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13885 7ba3feb30451e752fd5ba436d8e4d119 128 Gene3D G3DSA:1.10.10.10 2 81 3.9E-30 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13885 7ba3feb30451e752fd5ba436d8e4d119 128 Pfam PF03965 Penicillinase repressor 9 120 9.0E-38 T 25-04-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLFO_RS13885 7ba3feb30451e752fd5ba436d8e4d119 128 PIRSF PIRSF019455 1 128 4.2E-41 T 25-04-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLFO_RS15575 cbd308f69babce4d29e10c544736d3f7 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 381 632 3.3E-85 T 25-04-2017 IPR010650 PrkA C-terminal domain CLFO_RS15575 cbd308f69babce4d29e10c544736d3f7 640 Pfam PF08298 PrkA AAA domain 23 379 1.8E-169 T 25-04-2017 IPR013153 PrkA AAA domain CLFO_RS15575 cbd308f69babce4d29e10c544736d3f7 640 PIRSF PIRSF000549 1 640 2.2E-257 T 25-04-2017 IPR016230 Serine-protein kinase, PrkA GO:0004672 CLFO_RS15575 cbd308f69babce4d29e10c544736d3f7 640 SUPERFAMILY SSF52540 238 363 6.65E-16 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15575 cbd308f69babce4d29e10c544736d3f7 640 SUPERFAMILY SSF52540 414 453 6.65E-16 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15575 cbd308f69babce4d29e10c544736d3f7 640 SUPERFAMILY SSF52540 69 167 6.65E-16 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15575 cbd308f69babce4d29e10c544736d3f7 640 Gene3D G3DSA:3.40.50.300 459 519 1.9E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15575 cbd308f69babce4d29e10c544736d3f7 640 Gene3D G3DSA:3.40.50.300 82 164 1.9E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15575 cbd308f69babce4d29e10c544736d3f7 640 SMART SM00763 22 379 4.0E-185 T 25-04-2017 IPR013153 PrkA AAA domain CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 SUPERFAMILY SSF51412 5 91 7.85E-131 T 25-04-2017 CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 SUPERFAMILY SSF51412 216 474 7.85E-131 T 25-04-2017 CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 SUPERFAMILY SSF54631 66 204 1.89E-28 T 25-04-2017 CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 Pfam PF00571 CBS domain 150 200 1.9E-8 T 25-04-2017 IPR000644 CBS domain CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 Pfam PF00571 CBS domain 97 140 3.8E-8 T 25-04-2017 IPR000644 CBS domain CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 Gene3D G3DSA:3.20.20.70 3 482 2.0E-207 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 SMART SM00116 97 144 5.8E-7 T 25-04-2017 IPR000644 CBS domain CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 SMART SM00116 157 205 7.9E-9 T 25-04-2017 IPR000644 CBS domain CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 PIRSF PIRSF000130 1 485 4.5E-215 T 25-04-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 25-04-2017 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 9 483 87.367 T 25-04-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 9 452 4.4E-199 T 25-04-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 470 2.8E-169 T 25-04-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CLFO_RS01960 ddb292252d2cd832c209df2eebbf2a01 485 SMART SM01240 8 470 0.0 T 25-04-2017 CLFO_RS09545 a07fd2ecf7d3dce5f38b81f5336ad91b 288 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 10 280 3.0E-83 T 25-04-2017 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CLFO_RS09545 a07fd2ecf7d3dce5f38b81f5336ad91b 288 Gene3D G3DSA:3.40.192.10 5 113 1.3E-43 T 25-04-2017 CLFO_RS09545 a07fd2ecf7d3dce5f38b81f5336ad91b 288 SUPERFAMILY SSF51735 109 283 1.63E-39 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS09545 a07fd2ecf7d3dce5f38b81f5336ad91b 288 SUPERFAMILY SSF53223 5 108 1.21E-35 T 25-04-2017 CLFO_RS09545 a07fd2ecf7d3dce5f38b81f5336ad91b 288 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 9 283 33.504 T 25-04-2017 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CLFO_RS09545 a07fd2ecf7d3dce5f38b81f5336ad91b 288 Gene3D G3DSA:3.40.50.720 114 284 1.2E-43 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS09545 a07fd2ecf7d3dce5f38b81f5336ad91b 288 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 96 4.7E-29 T 25-04-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CLFO_RS15550 2638bfed08f3cf71a92b706c1f0668e7 173 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 20 35 1.2E-18 T 25-04-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CLFO_RS15550 2638bfed08f3cf71a92b706c1f0668e7 173 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 1.2E-18 T 25-04-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CLFO_RS15550 2638bfed08f3cf71a92b706c1f0668e7 173 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 118 1.2E-18 T 25-04-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CLFO_RS15550 2638bfed08f3cf71a92b706c1f0668e7 173 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 58 1.2E-18 T 25-04-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CLFO_RS15550 2638bfed08f3cf71a92b706c1f0668e7 173 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 41 58 - T 25-04-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CLFO_RS15550 2638bfed08f3cf71a92b706c1f0668e7 173 Gene3D G3DSA:2.40.100.10 2 160 4.1E-57 T 25-04-2017 IPR029000 Cyclophilin-like domain CLFO_RS15550 2638bfed08f3cf71a92b706c1f0668e7 173 SUPERFAMILY SSF50891 5 160 1.01E-52 T 25-04-2017 IPR029000 Cyclophilin-like domain CLFO_RS15550 2638bfed08f3cf71a92b706c1f0668e7 173 PIRSF PIRSF001467 1 163 9.3E-41 T 25-04-2017 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CLFO_RS15550 2638bfed08f3cf71a92b706c1f0668e7 173 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 158 3.8E-48 T 25-04-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CLFO_RS09165 61ddfbf633dc5c96bb758c41827f156b 442 SUPERFAMILY SSF48179 208 305 6.12E-33 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS09165 61ddfbf633dc5c96bb758c41827f156b 442 PIRSF PIRSF500136 2 434 1.7E-148 T 25-04-2017 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CLFO_RS09165 61ddfbf633dc5c96bb758c41827f156b 442 SMART SM00984 326 421 7.4E-22 T 25-04-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS09165 61ddfbf633dc5c96bb758c41827f156b 442 PIRSF PIRSF000124 12 431 3.3E-67 T 25-04-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CLFO_RS09165 61ddfbf633dc5c96bb758c41827f156b 442 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 299 4.9E-31 T 25-04-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS09165 61ddfbf633dc5c96bb758c41827f156b 442 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 327 420 2.4E-20 T 25-04-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS09165 61ddfbf633dc5c96bb758c41827f156b 442 Gene3D G3DSA:3.40.50.720 6 229 3.7E-55 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS09165 61ddfbf633dc5c96bb758c41827f156b 442 SUPERFAMILY SSF51735 14 200 2.02E-39 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS09165 61ddfbf633dc5c96bb758c41827f156b 442 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 14 188 1.1E-44 T 25-04-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS09165 61ddfbf633dc5c96bb758c41827f156b 442 Gene3D G3DSA:3.40.50.720 239 422 1.3E-43 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS09165 61ddfbf633dc5c96bb758c41827f156b 442 SUPERFAMILY SSF52413 313 420 2.09E-23 T 25-04-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CLFO_RS09165 61ddfbf633dc5c96bb758c41827f156b 442 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 14 417 2.4E-131 T 25-04-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CLFO_RS09900 beb5ed4e7d1e0e76724f3913fbd46e08 428 Pfam PF01134 Glucose inhibited division protein A 276 353 2.8E-11 T 25-04-2017 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CLFO_RS09900 beb5ed4e7d1e0e76724f3913fbd46e08 428 Pfam PF01134 Glucose inhibited division protein A 5 217 2.2E-25 T 25-04-2017 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CLFO_RS09900 beb5ed4e7d1e0e76724f3913fbd46e08 428 Gene3D G3DSA:3.50.50.60 5 196 3.1E-23 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS09900 beb5ed4e7d1e0e76724f3913fbd46e08 428 Gene3D G3DSA:3.50.50.60 283 346 3.1E-23 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS09900 beb5ed4e7d1e0e76724f3913fbd46e08 428 SUPERFAMILY SSF51905 300 346 2.55E-27 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS09900 beb5ed4e7d1e0e76724f3913fbd46e08 428 SUPERFAMILY SSF51905 5 157 2.55E-27 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS20625 f57136ce128ba120f2ca6bca4c8705f7 632 SUPERFAMILY SSF56228 7 209 1.44E-62 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS20625 f57136ce128ba120f2ca6bca4c8705f7 632 Gene3D G3DSA:1.10.569.10 242 431 1.1E-60 T 25-04-2017 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 CLFO_RS20625 f57136ce128ba120f2ca6bca4c8705f7 632 Gene3D G3DSA:3.60.9.10 7 210 1.2E-72 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS20625 f57136ce128ba120f2ca6bca4c8705f7 632 SUPERFAMILY SSF48310 213 628 1.96E-102 T 25-04-2017 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS20625 f57136ce128ba120f2ca6bca4c8705f7 632 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 8 205 1.2E-67 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS20625 f57136ce128ba120f2ca6bca4c8705f7 632 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 221 625 7.9E-117 T 25-04-2017 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS20625 f57136ce128ba120f2ca6bca4c8705f7 632 SMART SM00790 6 208 5.2E-91 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS14700 960daf0e08a68c9e1f9ea547f398892b 356 SUPERFAMILY SSF51658 1 350 2.63E-85 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS14700 960daf0e08a68c9e1f9ea547f398892b 356 Gene3D G3DSA:3.20.20.150 1 353 2.5E-143 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS14700 960daf0e08a68c9e1f9ea547f398892b 356 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 352 7.1E-146 T 25-04-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CLFO_RS14700 960daf0e08a68c9e1f9ea547f398892b 356 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 356 164.816 T 25-04-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CLFO_RS14700 960daf0e08a68c9e1f9ea547f398892b 356 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 156 354 2.5E-66 T 25-04-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CLFO_RS04075 31c7a08e8556719df26357304060789f 273 Gene3D G3DSA:3.40.50.300 3 233 5.1E-63 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04075 31c7a08e8556719df26357304060789f 273 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS04075 31c7a08e8556719df26357304060789f 273 Pfam PF00005 ABC transporter 23 168 6.4E-31 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS04075 31c7a08e8556719df26357304060789f 273 SUPERFAMILY SSF52540 7 232 3.17E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04075 31c7a08e8556719df26357304060789f 273 SMART SM00382 32 217 2.8E-9 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04075 31c7a08e8556719df26357304060789f 273 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 16 203 9.4E-67 T 25-04-2017 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 CLFO_RS14585 5e30d296f209d24d9463f70876dab563 191 SMART SM00448 2 113 2.8E-35 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS14585 5e30d296f209d24d9463f70876dab563 191 SUPERFAMILY SSF48452 123 178 1.73E-9 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS14585 5e30d296f209d24d9463f70876dab563 191 SUPERFAMILY SSF52172 1 129 3.84E-38 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS14585 5e30d296f209d24d9463f70876dab563 191 Pfam PF00072 Response regulator receiver domain 4 113 3.7E-30 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS14585 5e30d296f209d24d9463f70876dab563 191 Gene3D G3DSA:1.25.40.10 122 188 1.6E-9 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS14585 5e30d296f209d24d9463f70876dab563 191 Gene3D G3DSA:3.40.50.2300 1 121 4.7E-39 T 25-04-2017 CLFO_RS14585 5e30d296f209d24d9463f70876dab563 191 Pfam PF13414 TPR repeat 140 171 3.0E-7 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 Gene3D G3DSA:3.30.565.10 343 476 5.0E-37 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 477 9.6E-21 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 SMART SM00387 365 479 3.2E-24 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 Gene3D G3DSA:1.10.287.130 279 319 8.2E-4 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 Gene3D G3DSA:1.10.287.130 216 242 8.2E-4 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 Gene3D G3DSA:3.30.450.40 26 187 2.5E-15 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 1.0E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 456 1.0E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 1.0E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 1.0E-17 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 SUPERFAMILY SSF55874 325 477 1.57E-33 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 SMART SM00388 216 324 0.009 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 SUPERFAMILY SSF47384 212 250 1.02E-5 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 Pfam PF00512 His Kinase A (phospho-acceptor) domain 218 323 1.3E-9 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 SUPERFAMILY SSF55781 27 184 1.32E-14 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS09460 3fceab4daf4a2e828427159e44c66f05 486 SMART SM00065 27 181 0.0068 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 SUPERFAMILY SSF47384 232 312 2.35E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 Gene3D G3DSA:3.30.565.10 324 464 8.9E-34 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 4.9E-9 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 4.9E-9 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 4.9E-9 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 4.9E-9 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 Pfam PF00672 HAMP domain 171 237 7.0E-16 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 Gene3D G3DSA:1.10.287.130 241 309 1.2E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 463 9.2E-18 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 SUPERFAMILY SSF158472 191 239 6.8E-11 T 25-04-2017 CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 SUPERFAMILY SSF55874 319 465 8.64E-32 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 SMART SM00387 357 469 4.9E-24 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 SMART SM00304 189 241 3.4E-13 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 309 5.4E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06840 8e772acde75fe46217e1c2276aac43fa 480 SMART SM00388 249 315 8.3E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18425 af7da3c57dba7200beac3a565d77c57d 513 Gene3D G3DSA:3.40.1080.10 1 243 6.3E-101 T 25-04-2017 CLFO_RS18425 af7da3c57dba7200beac3a565d77c57d 513 PIRSF PIRSF009451 1 513 7.3E-236 T 25-04-2017 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CLFO_RS18425 af7da3c57dba7200beac3a565d77c57d 513 Gene3D G3DSA:3.40.810.20 245 486 1.2E-71 T 25-04-2017 CLFO_RS18425 af7da3c57dba7200beac3a565d77c57d 513 SUPERFAMILY SSF100950 246 511 4.67E-62 T 25-04-2017 CLFO_RS18425 af7da3c57dba7200beac3a565d77c57d 513 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 47 511 1.7E-195 T 25-04-2017 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CLFO_RS18425 af7da3c57dba7200beac3a565d77c57d 513 SUPERFAMILY SSF100950 3 243 1.42E-73 T 25-04-2017 CLFO_RS18425 af7da3c57dba7200beac3a565d77c57d 513 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 30 513 3.6E-207 T 25-04-2017 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CLFO_RS21185 047739ca0f0ad70f99576d308e9fd742 281 SUPERFAMILY SSF52980 8 174 1.93E-50 T 25-04-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLFO_RS21185 047739ca0f0ad70f99576d308e9fd742 281 Gene3D G3DSA:3.40.1350.10 8 174 3.6E-54 T 25-04-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 CLFO_RS21185 047739ca0f0ad70f99576d308e9fd742 281 Pfam PF08722 TnsA endonuclease N terminal 75 170 1.5E-15 T 25-04-2017 IPR014833 TnsA endonuclease, N-terminal CLFO_RS21185 047739ca0f0ad70f99576d308e9fd742 281 Gene3D G3DSA:1.10.10.10 179 265 1.4E-8 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS21185 047739ca0f0ad70f99576d308e9fd742 281 Pfam PF08721 TnsA endonuclease C terminal 173 255 1.6E-12 T 25-04-2017 IPR014832 TnsA endonuclease C-terminal CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 SMART SM00831 1 61 0.0066 T 25-04-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 Gene3D G3DSA:2.70.150.10 99 217 1.7E-32 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 Gene3D G3DSA:2.70.150.10 6 40 1.7E-32 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 SUPERFAMILY SSF56784 338 357 1.97E-47 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 SUPERFAMILY SSF56784 480 727 1.97E-47 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 Pfam PF00122 E1-E2 ATPase 73 330 2.8E-44 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 Pfam PF00689 Cation transporting ATPase, C-terminus 707 883 6.6E-37 T 25-04-2017 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 595 705 1.3E-28 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 73 168 2.5E-19 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 Pfam PF00690 Cation transporter/ATPase, N-terminus 6 53 6.6E-10 T 25-04-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 623 639 5.9E-16 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 654 679 5.9E-16 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 483 501 5.9E-16 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 SUPERFAMILY SSF81653 106 215 3.53E-23 T 25-04-2017 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 Gene3D G3DSA:3.40.1110.10 330 526 2.2E-30 T 25-04-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 341 347 - T 25-04-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 5 877 1.4E-184 T 25-04-2017 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 SUPERFAMILY SSF81660 345 529 1.83E-24 T 25-04-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 531 1.4E-32 T 25-04-2017 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 542 552 1.4E-32 T 25-04-2017 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 151 165 1.4E-32 T 25-04-2017 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 339 353 1.4E-32 T 25-04-2017 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 646 658 1.4E-32 T 25-04-2017 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 642 1.4E-32 T 25-04-2017 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 Pfam PF00702 haloacid dehalogenase-like hydrolase 336 637 1.2E-17 T 25-04-2017 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 Gene3D G3DSA:1.20.1110.10 592 884 1.5E-84 T 25-04-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 Gene3D G3DSA:1.20.1110.10 41 98 1.5E-84 T 25-04-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 SUPERFAMILY SSF81665 217 333 2.35E-90 T 25-04-2017 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 SUPERFAMILY SSF81665 6 104 2.35E-90 T 25-04-2017 CLFO_RS12955 98b37783ce9d132018bfa4fc007e5db1 917 SUPERFAMILY SSF81665 672 887 2.35E-90 T 25-04-2017 CLFO_RS07180 c373cb2f6c3813fce36fd7ede615b2d4 676 Gene3D G3DSA:3.40.50.300 429 660 3.3E-75 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07180 c373cb2f6c3813fce36fd7ede615b2d4 676 Pfam PF00664 ABC transporter transmembrane region 37 383 4.9E-52 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS07180 c373cb2f6c3813fce36fd7ede615b2d4 676 SMART SM00382 455 656 4.4E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS07180 c373cb2f6c3813fce36fd7ede615b2d4 676 Gene3D G3DSA:1.20.1560.10 145 412 3.2E-84 T 25-04-2017 CLFO_RS07180 c373cb2f6c3813fce36fd7ede615b2d4 676 Gene3D G3DSA:1.20.1560.10 23 73 3.2E-84 T 25-04-2017 CLFO_RS07180 c373cb2f6c3813fce36fd7ede615b2d4 676 Pfam PF00005 ABC transporter 446 595 1.7E-31 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS07180 c373cb2f6c3813fce36fd7ede615b2d4 676 SUPERFAMILY SSF90123 23 61 2.88E-82 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS07180 c373cb2f6c3813fce36fd7ede615b2d4 676 SUPERFAMILY SSF90123 140 412 2.88E-82 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS07180 c373cb2f6c3813fce36fd7ede615b2d4 676 SUPERFAMILY SSF52540 423 666 4.49E-88 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15435 42a9886e1f96c7a0cf49a03d29613e15 254 SUPERFAMILY SSF53335 17 195 8.6E-18 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS15435 42a9886e1f96c7a0cf49a03d29613e15 254 Gene3D G3DSA:3.40.50.150 18 242 8.9E-19 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS15435 42a9886e1f96c7a0cf49a03d29613e15 254 Pfam PF08241 Methyltransferase domain 23 128 7.0E-10 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS01870 fd38ba8bbcb93cabacc49e5c26359469 213 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 3 211 36.284 T 25-04-2017 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 CLFO_RS01870 fd38ba8bbcb93cabacc49e5c26359469 213 SMART SM00881 81 182 4.8E-18 T 25-04-2017 IPR003781 CoA-binding GO:0048037 CLFO_RS01870 fd38ba8bbcb93cabacc49e5c26359469 213 Pfam PF02629 CoA binding domain 86 181 1.9E-24 T 25-04-2017 IPR003781 CoA-binding GO:0048037 CLFO_RS01870 fd38ba8bbcb93cabacc49e5c26359469 213 SUPERFAMILY SSF51735 86 208 7.09E-30 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01870 fd38ba8bbcb93cabacc49e5c26359469 213 Gene3D G3DSA:3.40.50.720 79 211 2.9E-51 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01870 fd38ba8bbcb93cabacc49e5c26359469 213 SUPERFAMILY SSF46785 11 81 1.66E-17 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS01870 fd38ba8bbcb93cabacc49e5c26359469 213 Pfam PF06971 Putative DNA-binding protein N-terminus 7 55 2.2E-20 T 25-04-2017 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 CLFO_RS01870 fd38ba8bbcb93cabacc49e5c26359469 213 Gene3D G3DSA:1.10.10.10 6 78 2.7E-29 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS17425 c3118fc741f3eb202e64f63300ee95c9 120 PIRSF PIRSF003230 1 120 4.8E-37 T 25-04-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CLFO_RS17425 c3118fc741f3eb202e64f63300ee95c9 120 Pfam PF03061 Thioesterase superfamily 3 83 3.0E-13 T 25-04-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 CLFO_RS17425 c3118fc741f3eb202e64f63300ee95c9 120 SUPERFAMILY SSF54637 2 115 4.76E-32 T 25-04-2017 IPR029069 HotDog domain CLFO_RS17425 c3118fc741f3eb202e64f63300ee95c9 120 Gene3D G3DSA:3.10.129.10 1 112 8.7E-39 T 25-04-2017 IPR029069 HotDog domain CLFO_RS17425 c3118fc741f3eb202e64f63300ee95c9 120 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 2 105 9.9E-27 T 25-04-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 SMART SM00388 163 234 2.3E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 164 234 3.5E-12 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 SMART SM00387 280 392 2.3E-38 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 SUPERFAMILY SSF55874 223 392 1.17E-44 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 Gene3D G3DSA:3.40.50.2300 4 133 7.2E-33 T 25-04-2017 CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 331 5.1E-19 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 345 5.1E-19 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 389 5.1E-19 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 370 5.1E-19 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 SUPERFAMILY SSF47384 149 235 5.89E-19 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 283 390 6.7E-26 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 Gene3D G3DSA:3.30.565.10 237 396 1.3E-45 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 Gene3D G3DSA:1.10.287.130 155 230 5.3E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 SMART SM00448 7 122 3.7E-31 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 SUPERFAMILY SSF52172 6 143 6.97E-34 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS18140 a82dd56b838979a2d070a03524d36a1b 429 Pfam PF00072 Response regulator receiver domain 9 123 1.5E-24 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS01145 c36610074744c5daf3698dd04a943bd3 380 Gene3D G3DSA:3.40.50.2000 208 323 7.2E-12 T 25-04-2017 CLFO_RS01145 c36610074744c5daf3698dd04a943bd3 380 SUPERFAMILY SSF53756 82 341 4.19E-36 T 25-04-2017 CLFO_RS01145 c36610074744c5daf3698dd04a943bd3 380 Pfam PF00534 Glycosyl transferases group 1 218 331 2.1E-21 T 25-04-2017 IPR001296 Glycosyl transferase, family 1 CLFO_RS03655 b1c1e77254fdf6b0e0330b61ecbc0ba7 280 SUPERFAMILY SSF47090 7 78 3.4E-21 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS03655 b1c1e77254fdf6b0e0330b61ecbc0ba7 280 SUPERFAMILY SSF47090 211 268 8.11E-15 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS03655 b1c1e77254fdf6b0e0330b61ecbc0ba7 280 Gene3D G3DSA:1.10.101.10 9 72 2.4E-21 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS03655 b1c1e77254fdf6b0e0330b61ecbc0ba7 280 Gene3D G3DSA:1.10.101.10 201 271 3.5E-18 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS03655 b1c1e77254fdf6b0e0330b61ecbc0ba7 280 Gene3D G3DSA:2.40.440.10 84 196 9.4E-39 T 25-04-2017 CLFO_RS03655 b1c1e77254fdf6b0e0330b61ecbc0ba7 280 Pfam PF03734 L,D-transpeptidase catalytic domain 87 195 6.4E-23 T 25-04-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CLFO_RS03655 b1c1e77254fdf6b0e0330b61ecbc0ba7 280 SUPERFAMILY SSF141523 85 196 4.71E-36 T 25-04-2017 CLFO_RS03655 b1c1e77254fdf6b0e0330b61ecbc0ba7 280 Pfam PF01471 Putative peptidoglycan binding domain 211 265 6.0E-14 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS03655 b1c1e77254fdf6b0e0330b61ecbc0ba7 280 Pfam PF01471 Putative peptidoglycan binding domain 17 72 1.5E-17 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 SUPERFAMILY SSF50447 174 263 8.73E-26 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 Gene3D G3DSA:1.10.10.10 574 630 5.8E-22 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 Gene3D G3DSA:1.10.10.10 437 502 1.6E-15 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 SUPERFAMILY SSF46785 438 508 3.26E-11 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 Gene3D G3DSA:2.40.30.10 272 354 3.8E-5 T 25-04-2017 CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 Pfam PF03144 Elongation factor Tu domain 2 194 260 3.9E-10 T 25-04-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 4 630 9.0E-116 T 25-04-2017 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 SUPERFAMILY SSF46785 577 630 1.09E-12 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 Gene3D G3DSA:2.40.30.10 185 262 1.1E-31 T 25-04-2017 CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 Gene3D G3DSA:3.40.50.300 4 184 7.4E-45 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 Gene3D G3DSA:1.10.10.10 513 571 3.9E-6 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 PRINTS PR00315 GTP-binding elongation factor signature 5 18 4.8E-6 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 PRINTS PR00315 GTP-binding elongation factor signature 73 84 4.8E-6 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 PRINTS PR00315 GTP-binding elongation factor signature 57 67 4.8E-6 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 Pfam PF00009 Elongation factor Tu GTP binding domain 4 167 1.9E-31 T 25-04-2017 CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 145 1.1E-12 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 SUPERFAMILY SSF52540 3 195 3.44E-44 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 Pfam PF09107 Elongation factor SelB, winged helix 584 630 1.0E-19 T 25-04-2017 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 29 44 - T 25-04-2017 IPR031157 Tr-type G domain, conserved site CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 Pfam PF09106 Elongation factor SelB, winged helix 449 500 3.6E-10 T 25-04-2017 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CLFO_RS08635 537e8c88d9559e5aa1a6d2a3deb847dc 631 SUPERFAMILY SSF50465 266 364 1.58E-29 T 25-04-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLFO_RS12415 2b7233840e4b822b0698344f7eea964a 232 SUPERFAMILY SSF48317 51 230 1.57E-17 T 25-04-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLFO_RS12415 2b7233840e4b822b0698344f7eea964a 232 Pfam PF01219 Prokaryotic diacylglycerol kinase 11 112 2.3E-32 T 25-04-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 CLFO_RS12415 2b7233840e4b822b0698344f7eea964a 232 SMART SM00014 97 228 7.0E-8 T 25-04-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLFO_RS12415 2b7233840e4b822b0698344f7eea964a 232 Pfam PF01569 PAP2 superfamily 159 230 4.6E-12 T 25-04-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLFO_RS12415 2b7233840e4b822b0698344f7eea964a 232 Gene3D G3DSA:1.20.144.10 106 229 2.5E-10 T 25-04-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLFO_RS12415 2b7233840e4b822b0698344f7eea964a 232 Gene3D G3DSA:1.10.3830.10 2 105 5.4E-38 T 25-04-2017 CLFO_RS13955 3c59a86d0fe7ccf5e3e377d9e0bbe546 409 PIRSF PIRSF029172 3 409 8.4E-120 T 25-04-2017 IPR027020 Protein ynjB CLFO_RS13955 3c59a86d0fe7ccf5e3e377d9e0bbe546 409 Pfam PF13416 Bacterial extracellular solute-binding protein 68 356 6.1E-33 T 25-04-2017 CLFO_RS13955 3c59a86d0fe7ccf5e3e377d9e0bbe546 409 Gene3D G3DSA:3.40.190.10 179 199 1.8E-14 T 25-04-2017 CLFO_RS13955 3c59a86d0fe7ccf5e3e377d9e0bbe546 409 Gene3D G3DSA:3.40.190.10 2 143 1.8E-14 T 25-04-2017 CLFO_RS13955 3c59a86d0fe7ccf5e3e377d9e0bbe546 409 SUPERFAMILY SSF53850 45 400 1.81E-36 T 25-04-2017 CLFO_RS13955 3c59a86d0fe7ccf5e3e377d9e0bbe546 409 Gene3D G3DSA:3.40.190.10 204 345 6.3E-4 T 25-04-2017 CLFO_RS10075 0f08ac80732773e60d13090e26a2dbb6 399 Gene3D G3DSA:3.30.565.10 252 397 7.2E-15 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS10075 0f08ac80732773e60d13090e26a2dbb6 399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 294 396 5.8E-6 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS10075 0f08ac80732773e60d13090e26a2dbb6 399 Pfam PF06580 Histidine kinase 196 275 9.9E-25 T 25-04-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLFO_RS10075 0f08ac80732773e60d13090e26a2dbb6 399 Pfam PF10114 Sensory domain found in PocR 9 170 1.1E-46 T 25-04-2017 IPR018771 PocR domain CLFO_RS10075 0f08ac80732773e60d13090e26a2dbb6 399 SMART SM00387 290 399 2.6E-6 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS10075 0f08ac80732773e60d13090e26a2dbb6 399 SUPERFAMILY SSF55874 253 396 3.27E-16 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06955 ec8b29284bc874953aeb80f2ac6c3af3 322 Pfam PF12727 PBP superfamily domain 107 295 5.8E-64 T 25-04-2017 IPR024370 PBP domain CLFO_RS06955 ec8b29284bc874953aeb80f2ac6c3af3 322 SUPERFAMILY SSF46955 6 51 3.11E-5 T 25-04-2017 IPR009061 Putative DNA-binding domain CLFO_RS06955 ec8b29284bc874953aeb80f2ac6c3af3 322 SUPERFAMILY SSF53850 97 310 6.33E-19 T 25-04-2017 CLFO_RS06955 ec8b29284bc874953aeb80f2ac6c3af3 322 Pfam PF12728 Helix-turn-helix domain 7 54 9.0E-15 T 25-04-2017 CLFO_RS06955 ec8b29284bc874953aeb80f2ac6c3af3 322 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 52 3.3E-15 T 25-04-2017 IPR010093 SinI-like, DNA-binding domain GO:0003677 CLFO_RS06955 ec8b29284bc874953aeb80f2ac6c3af3 322 Gene3D G3DSA:1.10.10.10 7 58 1.5E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06955 ec8b29284bc874953aeb80f2ac6c3af3 322 Gene3D G3DSA:3.40.190.10 173 302 2.1E-20 T 25-04-2017 CLFO_RS10995 460cf53be74d6e0da5f467403d553979 206 Gene3D G3DSA:3.40.1550.10 7 204 3.9E-65 T 25-04-2017 IPR028976 CheC-like domain CLFO_RS10995 460cf53be74d6e0da5f467403d553979 206 SUPERFAMILY SSF103039 7 204 1.22E-52 T 25-04-2017 IPR028976 CheC-like domain CLFO_RS10995 460cf53be74d6e0da5f467403d553979 206 Pfam PF04509 CheC-like family 12 49 1.1E-16 T 25-04-2017 IPR007597 CheC-like protein GO:0016787 CLFO_RS10995 460cf53be74d6e0da5f467403d553979 206 Pfam PF04509 CheC-like family 112 145 4.7E-9 T 25-04-2017 IPR007597 CheC-like protein GO:0016787 CLFO_RS07770 a690d419f2917927d323cceac6d3dec4 542 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 171 4.0E-11 T 25-04-2017 IPR024474 Zinc-finger binding domain of transposase IS66 CLFO_RS07770 a690d419f2917927d323cceac6d3dec4 542 Pfam PF03050 Transposase IS66 family 191 482 7.8E-85 T 25-04-2017 IPR004291 Transposase, IS66 CLFO_RS05105 408c7f098f27e313faeaf0b3d911bfbc 272 Gene3D G3DSA:3.20.10.10 111 267 3.8E-43 T 25-04-2017 CLFO_RS05105 408c7f098f27e313faeaf0b3d911bfbc 272 Pfam PF01063 Amino-transferase class IV 29 244 4.9E-52 T 25-04-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CLFO_RS05105 408c7f098f27e313faeaf0b3d911bfbc 272 Gene3D G3DSA:3.30.470.10 1 93 6.9E-22 T 25-04-2017 CLFO_RS05105 408c7f098f27e313faeaf0b3d911bfbc 272 ProSitePatterns PS00770 Aminotransferases class-IV signature. 170 199 - T 25-04-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CLFO_RS05105 408c7f098f27e313faeaf0b3d911bfbc 272 SUPERFAMILY SSF56752 4 268 1.07E-65 T 25-04-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CLFO_RS20115 0d42a87526ba7e19878012e9050945a7 400 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 4 400 2.9E-76 T 25-04-2017 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLFO_RS20115 0d42a87526ba7e19878012e9050945a7 400 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 231 397 1.5E-30 T 25-04-2017 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLFO_RS11075 2abae881e22c21e759106bf7892a0e94 138 Pfam PF03748 Flagellar basal body-associated protein FliL 49 138 4.8E-19 T 25-04-2017 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CLFO_RS11735 8724ef5e6ea625f4818e9638605725e4 455 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 6 452 34.971 T 25-04-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS11735 8724ef5e6ea625f4818e9638605725e4 455 SUPERFAMILY SSF53623 101 310 1.1E-55 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS11735 8724ef5e6ea625f4818e9638605725e4 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 383 1.2E-8 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS11735 8724ef5e6ea625f4818e9638605725e4 455 SUPERFAMILY SSF53244 312 452 5.04E-42 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS11735 8724ef5e6ea625f4818e9638605725e4 455 Pfam PF08245 Mur ligase middle domain 115 293 7.1E-40 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS11735 8724ef5e6ea625f4818e9638605725e4 455 Gene3D G3DSA:3.40.1190.10 99 312 3.5E-64 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS11735 8724ef5e6ea625f4818e9638605725e4 455 Gene3D G3DSA:3.40.50.720 1 97 5.2E-16 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS11735 8724ef5e6ea625f4818e9638605725e4 455 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 7 450 1.7E-134 T 25-04-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS11735 8724ef5e6ea625f4818e9638605725e4 455 Gene3D G3DSA:3.90.190.20 315 449 1.5E-46 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS11735 8724ef5e6ea625f4818e9638605725e4 455 SUPERFAMILY SSF51984 1 99 6.67E-14 T 25-04-2017 CLFO_RS03845 08ffe59a7d9466e16c7158c96093fa08 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 416 1.4E-115 T 25-04-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLFO_RS03845 08ffe59a7d9466e16c7158c96093fa08 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 19 423 1.9E-131 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS03845 08ffe59a7d9466e16c7158c96093fa08 428 PIRSF PIRSF006066 3 428 1.5E-147 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS05835 7e1e14313820b22cbc506de682fe935d 380 SUPERFAMILY SSF101478 3 237 3.92E-10 T 25-04-2017 IPR005502 ADP-ribosylation/Crystallin J1 CLFO_RS05835 7e1e14313820b22cbc506de682fe935d 380 Pfam PF03747 ADP-ribosylglycohydrolase 10 183 1.7E-6 T 25-04-2017 IPR005502 ADP-ribosylation/Crystallin J1 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 Gene3D G3DSA:3.30.450.20 529 653 2.5E-8 T 25-04-2017 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 Pfam PF13426 PAS domain 571 653 0.15 T 25-04-2017 IPR000014 PAS domain CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 Pfam PF13426 PAS domain 371 520 0.0034 T 25-04-2017 IPR000014 PAS domain CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 Pfam PF13426 PAS domain 239 344 0.01 T 25-04-2017 IPR000014 PAS domain CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 SUPERFAMILY SSF55785 218 343 1.92E-6 T 25-04-2017 IPR000014 PAS domain CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 SUPERFAMILY SSF55785 469 523 2.73E-8 T 25-04-2017 IPR000014 PAS domain CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 SUPERFAMILY SSF55785 365 421 2.73E-8 T 25-04-2017 IPR000014 PAS domain CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 786 893 1.9E-21 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 Pfam PF00512 His Kinase A (phospho-acceptor) domain 668 737 1.1E-12 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 Gene3D G3DSA:3.30.565.10 724 894 2.6E-41 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 Gene3D G3DSA:1.10.287.130 660 723 4.2E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 Gene3D G3DSA:3.30.450.20 219 343 3.1E-6 T 25-04-2017 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 PRINTS PR00344 Bacterial sensor protein C-terminal signature 838 848 5.2E-14 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 PRINTS PR00344 Bacterial sensor protein C-terminal signature 879 892 5.2E-14 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 PRINTS PR00344 Bacterial sensor protein C-terminal signature 820 834 5.2E-14 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 PRINTS PR00344 Bacterial sensor protein C-terminal signature 855 873 5.2E-14 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 SUPERFAMILY SSF55874 726 893 9.95E-40 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 Gene3D G3DSA:3.30.450.20 359 420 1.9E-13 T 25-04-2017 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 Gene3D G3DSA:3.30.450.20 471 528 1.9E-13 T 25-04-2017 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 SMART SM00387 783 895 2.5E-28 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 SUPERFAMILY SSF47384 657 737 3.14E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 SMART SM00388 668 737 8.0E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 SUPERFAMILY SSF55785 518 653 1.36E-8 T 25-04-2017 IPR000014 PAS domain CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 SMART SM00091 360 427 0.098 T 25-04-2017 IPR000014 PAS domain CLFO_RS03665 f2c0ad8fcd79c9efdf05c8aad79eb3e3 921 SMART SM00091 533 606 12.0 T 25-04-2017 IPR000014 PAS domain CLFO_RS10365 5ae30b13a191fd243f6481a3271f11c7 298 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 9 157 1.9E-36 T 25-04-2017 IPR018755 Bacteriophage Mu, Gp48 CLFO_RS13760 6cb3751b5f7a717b292a5a92c8408585 339 Pfam PF00005 ABC transporter 98 247 3.6E-16 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS13760 6cb3751b5f7a717b292a5a92c8408585 339 SUPERFAMILY SSF52540 81 300 4.35E-29 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13760 6cb3751b5f7a717b292a5a92c8408585 339 ProSitePatterns PS00211 ABC transporters family signature. 220 234 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS13760 6cb3751b5f7a717b292a5a92c8408585 339 Gene3D G3DSA:3.40.50.300 81 301 9.9E-26 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13760 6cb3751b5f7a717b292a5a92c8408585 339 SMART SM00382 106 291 2.1E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04950 0fd64037bf138b734eff26e36a1c9de7 160 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 23 79 2.2E-17 T 25-04-2017 IPR022687 DTXR-type HTH domain GO:0003677 CLFO_RS04950 0fd64037bf138b734eff26e36a1c9de7 160 SUPERFAMILY SSF47979 84 152 1.26E-11 T 25-04-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CLFO_RS04950 0fd64037bf138b734eff26e36a1c9de7 160 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 84 148 2.1E-9 T 25-04-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CLFO_RS04950 0fd64037bf138b734eff26e36a1c9de7 160 Gene3D G3DSA:1.10.10.10 23 92 5.5E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS04950 0fd64037bf138b734eff26e36a1c9de7 160 SUPERFAMILY SSF46785 23 83 1.77E-14 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS04950 0fd64037bf138b734eff26e36a1c9de7 160 SMART SM00529 45 143 1.5E-14 T 25-04-2017 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 CLFO_RS04950 0fd64037bf138b734eff26e36a1c9de7 160 Gene3D G3DSA:1.10.60.10 96 157 1.3E-11 T 25-04-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 Gene3D G3DSA:3.90.740.10 206 370 7.5E-59 T 25-04-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 SUPERFAMILY SSF47323 644 879 9.72E-56 T 25-04-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 Gene3D G3DSA:3.40.50.620 387 623 7.4E-149 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 Gene3D G3DSA:3.40.50.620 12 195 7.4E-149 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 Pfam PF08264 Anticodon-binding domain of tRNA 676 823 8.0E-34 T 25-04-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 SUPERFAMILY SSF50677 207 378 3.56E-49 T 25-04-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 42 53 2.1E-29 T 25-04-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 508 521 2.1E-29 T 25-04-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 382 397 2.1E-29 T 25-04-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 221 244 2.1E-29 T 25-04-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 548 557 2.1E-29 T 25-04-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 Gene3D G3DSA:1.10.730.10 629 812 5.1E-50 T 25-04-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 2 1021 13.763 T 25-04-2017 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 SUPERFAMILY SSF52374 384 636 5.38E-137 T 25-04-2017 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 SUPERFAMILY SSF52374 12 199 5.38E-137 T 25-04-2017 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 12 830 2.3E-293 T 25-04-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CLFO_RS02975 9205ed637b3d4bac780ef1d0312d5024 1034 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 621 3.6E-190 T 25-04-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS06785 3eb3ed23b0916cd47e7fcbfd7a148878 143 SUPERFAMILY SSF48695 11 87 3.72E-6 T 25-04-2017 IPR011031 Multihaem cytochrome CLFO_RS06785 3eb3ed23b0916cd47e7fcbfd7a148878 143 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 15 143 3.5E-23 T 25-04-2017 IPR010181 CGCAxxGCC motif CLFO_RS06785 3eb3ed23b0916cd47e7fcbfd7a148878 143 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 15 142 1.1E-30 T 25-04-2017 IPR010181 CGCAxxGCC motif CLFO_RS05710 bc06bd6359563dffcdac475923fcbb96 413 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 114 255 8.1E-7 T 25-04-2017 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CLFO_RS05710 bc06bd6359563dffcdac475923fcbb96 413 SUPERFAMILY SSF51735 106 249 3.67E-13 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS05710 bc06bd6359563dffcdac475923fcbb96 413 Gene3D G3DSA:3.40.50.720 110 254 1.1E-17 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS12315 1c9bac18c420b85acb3b998f82cdb52f 471 Pfam PF07995 Glucose / Sorbosone dehydrogenase 71 271 1.2E-9 T 25-04-2017 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 CLFO_RS12315 1c9bac18c420b85acb3b998f82cdb52f 471 SUPERFAMILY SSF50952 130 271 6.02E-10 T 25-04-2017 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CLFO_RS12315 1c9bac18c420b85acb3b998f82cdb52f 471 SUPERFAMILY SSF50952 67 95 6.02E-10 T 25-04-2017 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CLFO_RS12315 1c9bac18c420b85acb3b998f82cdb52f 471 Gene3D G3DSA:2.120.10.30 5 471 1.7E-57 T 25-04-2017 IPR011042 Six-bladed beta-propeller, TolB-like CLFO_RS20655 def5351ab09fac226ab2771a02e79096 220 SMART SM00345 15 73 8.3E-14 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20655 def5351ab09fac226ab2771a02e79096 220 Gene3D G3DSA:1.10.10.10 7 74 1.0E-18 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20655 def5351ab09fac226ab2771a02e79096 220 Gene3D G3DSA:1.20.120.530 77 214 2.2E-20 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS20655 def5351ab09fac226ab2771a02e79096 220 Pfam PF07729 FCD domain 83 212 4.3E-13 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS20655 def5351ab09fac226ab2771a02e79096 220 SMART SM00895 83 214 5.4E-4 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS20655 def5351ab09fac226ab2771a02e79096 220 SUPERFAMILY SSF46785 8 77 1.36E-16 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20655 def5351ab09fac226ab2771a02e79096 220 SUPERFAMILY SSF48008 78 215 1.54E-18 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS20655 def5351ab09fac226ab2771a02e79096 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 73 2.5E-14 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS08350 730b826b476e90b711f2b66dbe473b10 625 Pfam PF03063 Prismane/CO dehydrogenase family 41 601 2.7E-141 T 25-04-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS08350 730b826b476e90b711f2b66dbe473b10 625 SUPERFAMILY SSF56821 11 621 1.22E-153 T 25-04-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLFO_RS08350 730b826b476e90b711f2b66dbe473b10 625 Gene3D G3DSA:1.20.1270.30 55 226 2.7E-59 T 25-04-2017 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS08350 730b826b476e90b711f2b66dbe473b10 625 Gene3D G3DSA:3.40.50.2030 403 622 9.7E-76 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS08350 730b826b476e90b711f2b66dbe473b10 625 PIRSF PIRSF005023 1 622 1.5E-230 T 25-04-2017 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS08350 730b826b476e90b711f2b66dbe473b10 625 Gene3D G3DSA:3.40.50.2030 228 399 7.1E-56 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS08350 730b826b476e90b711f2b66dbe473b10 625 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 4 621 4.6E-249 T 25-04-2017 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS21385 68ff24be61d4d34d140b242b5b205d5b 293 SMART SM00470 37 126 2.0E-31 T 25-04-2017 IPR003115 ParB/Sulfiredoxin CLFO_RS21385 68ff24be61d4d34d140b242b5b205d5b 293 Gene3D G3DSA:3.90.1530.10 32 132 2.0E-39 T 25-04-2017 CLFO_RS21385 68ff24be61d4d34d140b242b5b205d5b 293 SUPERFAMILY SSF109709 118 228 4.97E-34 T 25-04-2017 CLFO_RS21385 68ff24be61d4d34d140b242b5b205d5b 293 SUPERFAMILY SSF110849 37 128 9.94E-29 T 25-04-2017 IPR003115 ParB/Sulfiredoxin CLFO_RS21385 68ff24be61d4d34d140b242b5b205d5b 293 Pfam PF02195 ParB-like nuclease domain 39 126 5.3E-25 T 25-04-2017 IPR003115 ParB/Sulfiredoxin CLFO_RS21385 68ff24be61d4d34d140b242b5b205d5b 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 210 2.7E-53 T 25-04-2017 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CLFO_RS08560 e72c48788166a86678b07d37f5b7b034 206 SUPERFAMILY SSF52374 6 204 5.0E-56 T 25-04-2017 CLFO_RS08560 e72c48788166a86678b07d37f5b7b034 206 Gene3D G3DSA:3.40.50.620 6 205 1.4E-68 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS08560 e72c48788166a86678b07d37f5b7b034 206 Pfam PF01467 Cytidylyltransferase-like 10 179 3.0E-32 T 25-04-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLFO_RS08560 e72c48788166a86678b07d37f5b7b034 206 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 6 205 32.551 T 25-04-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 CLFO_RS08560 e72c48788166a86678b07d37f5b7b034 206 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 10 204 9.8E-60 T 25-04-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 CLFO_RS08560 e72c48788166a86678b07d37f5b7b034 206 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 68 1.5E-12 T 25-04-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLFO_RS10840 b20b21173b8f945413294b32e27907c3 417 Pfam PF05193 Peptidase M16 inactive domain 168 340 7.3E-41 T 25-04-2017 IPR007863 Peptidase M16, C-terminal CLFO_RS10840 b20b21173b8f945413294b32e27907c3 417 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 25-04-2017 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CLFO_RS10840 b20b21173b8f945413294b32e27907c3 417 SUPERFAMILY SSF63411 227 413 6.42E-44 T 25-04-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLFO_RS10840 b20b21173b8f945413294b32e27907c3 417 Gene3D G3DSA:3.30.830.10 223 409 1.4E-46 T 25-04-2017 IPR011237 Peptidase M16 domain GO:0046872 CLFO_RS10840 b20b21173b8f945413294b32e27907c3 417 SUPERFAMILY SSF63411 2 205 2.07E-63 T 25-04-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLFO_RS10840 b20b21173b8f945413294b32e27907c3 417 Gene3D G3DSA:3.30.830.10 2 210 8.2E-61 T 25-04-2017 IPR011237 Peptidase M16 domain GO:0046872 CLFO_RS10840 b20b21173b8f945413294b32e27907c3 417 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 8.9E-43 T 25-04-2017 IPR011765 Peptidase M16, N-terminal CLFO_RS14935 738ba03545414308a3b51742eb1f74d9 233 SMART SM00895 99 220 5.1E-20 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS14935 738ba03545414308a3b51742eb1f74d9 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.4E-20 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS14935 738ba03545414308a3b51742eb1f74d9 233 SUPERFAMILY SSF48008 95 222 2.22E-23 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS14935 738ba03545414308a3b51742eb1f74d9 233 Pfam PF07729 FCD domain 99 218 3.7E-23 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS14935 738ba03545414308a3b51742eb1f74d9 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.8E-10 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS14935 738ba03545414308a3b51742eb1f74d9 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.8E-10 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS14935 738ba03545414308a3b51742eb1f74d9 233 Gene3D G3DSA:1.20.120.530 94 221 6.0E-23 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS14935 738ba03545414308a3b51742eb1f74d9 233 SMART SM00345 15 74 3.3E-21 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS14935 738ba03545414308a3b51742eb1f74d9 233 Gene3D G3DSA:1.10.10.10 6 78 1.0E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS14935 738ba03545414308a3b51742eb1f74d9 233 SUPERFAMILY SSF46785 5 78 6.31E-22 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16615 f6f608e4e6cc80ce1773a8d1e663c046 192 Pfam PF01476 LysM domain 21 65 6.0E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS16615 f6f608e4e6cc80ce1773a8d1e663c046 192 Gene3D G3DSA:3.10.350.10 20 66 4.3E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS16615 f6f608e4e6cc80ce1773a8d1e663c046 192 SUPERFAMILY SSF54106 20 65 3.66E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS16615 f6f608e4e6cc80ce1773a8d1e663c046 192 SMART SM00257 20 65 2.6E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS12130 874317c8bbef94d18970da0bd8e2f0a9 70 Pfam PF10842 Protein of unknown function (DUF2642) 19 67 5.8E-5 T 25-04-2017 IPR020139 Protein of unknown function DUF2642 CLFO_RS09085 7e7edfd4bb5571d4662544bf34bfb4a0 454 Pfam PF13941 MutL protein 5 449 2.7E-170 T 25-04-2017 IPR006230 Protein MutL CLFO_RS09085 7e7edfd4bb5571d4662544bf34bfb4a0 454 PIRSF PIRSF004729 2 451 7.4E-154 T 25-04-2017 IPR006230 Protein MutL CLFO_RS09085 7e7edfd4bb5571d4662544bf34bfb4a0 454 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 44 449 1.1E-87 T 25-04-2017 IPR006230 Protein MutL CLFO_RS11415 51e6c8ca03efb0efb2a11d5500777eb9 828 TIGRFAM TIGR00595 priA: primosomal protein N' 307 825 1.4E-198 T 25-04-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CLFO_RS11415 51e6c8ca03efb0efb2a11d5500777eb9 828 Pfam PF00271 Helicase conserved C-terminal domain 605 677 6.5E-10 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS11415 51e6c8ca03efb0efb2a11d5500777eb9 828 Hamap MF_00983 Probable primosomal protein N' [priA]. 13 827 24.103 T 25-04-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CLFO_RS11415 51e6c8ca03efb0efb2a11d5500777eb9 828 SUPERFAMILY SSF52540 599 688 1.73E-38 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11415 51e6c8ca03efb0efb2a11d5500777eb9 828 SUPERFAMILY SSF52540 303 529 1.73E-38 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11415 51e6c8ca03efb0efb2a11d5500777eb9 828 SMART SM00487 279 478 6.2E-18 T 25-04-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLFO_RS11415 51e6c8ca03efb0efb2a11d5500777eb9 828 Pfam PF04851 Type III restriction enzyme, res subunit 285 446 1.1E-15 T 25-04-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CLFO_RS11415 51e6c8ca03efb0efb2a11d5500777eb9 828 Gene3D G3DSA:3.40.50.300 494 517 1.5E-34 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11415 51e6c8ca03efb0efb2a11d5500777eb9 828 Gene3D G3DSA:3.40.50.300 582 722 1.5E-34 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11415 51e6c8ca03efb0efb2a11d5500777eb9 828 Gene3D G3DSA:3.40.50.300 271 467 1.0E-36 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11415 51e6c8ca03efb0efb2a11d5500777eb9 828 SMART SM00490 585 678 5.2E-9 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS18590 f87ffee45055cc4f124921fcc5d5a201 514 SUPERFAMILY SSF52540 5 227 8.72E-56 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18590 f87ffee45055cc4f124921fcc5d5a201 514 SMART SM00382 282 489 15.0 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS18590 f87ffee45055cc4f124921fcc5d5a201 514 SMART SM00382 31 217 7.7E-15 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS18590 f87ffee45055cc4f124921fcc5d5a201 514 SUPERFAMILY SSF52540 249 484 3.18E-38 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18590 f87ffee45055cc4f124921fcc5d5a201 514 Pfam PF00005 ABC transporter 23 169 1.0E-27 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS18590 f87ffee45055cc4f124921fcc5d5a201 514 Pfam PF00005 ABC transporter 273 424 8.5E-11 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS18590 f87ffee45055cc4f124921fcc5d5a201 514 Gene3D G3DSA:3.40.50.300 254 493 1.8E-41 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18590 f87ffee45055cc4f124921fcc5d5a201 514 Gene3D G3DSA:3.40.50.300 2 234 3.3E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05460 245479162b2eb073f596ff8fbe6f3b0e 546 PIRSF PIRSF000076 3 546 3.6E-277 T 25-04-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05460 245479162b2eb073f596ff8fbe6f3b0e 546 SUPERFAMILY SSF56821 3 545 4.88E-218 T 25-04-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLFO_RS05460 245479162b2eb073f596ff8fbe6f3b0e 546 Hamap MF_00069 Hydroxylamine reductase [hcp]. 3 546 24.501 T 25-04-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05460 245479162b2eb073f596ff8fbe6f3b0e 546 Pfam PF03063 Prismane/CO dehydrogenase family 3 541 2.3E-189 T 25-04-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05460 245479162b2eb073f596ff8fbe6f3b0e 546 Gene3D G3DSA:3.40.50.2030 376 544 1.8E-75 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05460 245479162b2eb073f596ff8fbe6f3b0e 546 Gene3D G3DSA:1.20.1270.20 152 226 1.0E-30 T 25-04-2017 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05460 245479162b2eb073f596ff8fbe6f3b0e 546 Gene3D G3DSA:1.20.1270.20 1 151 6.7E-47 T 25-04-2017 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05460 245479162b2eb073f596ff8fbe6f3b0e 546 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 3 544 9.9E-241 T 25-04-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05460 245479162b2eb073f596ff8fbe6f3b0e 546 Gene3D G3DSA:3.40.50.2030 228 375 1.3E-71 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS02290 2d43bb7eae8b31a0e52f71bb8de5c6f7 273 SUPERFAMILY SSF53850 1 187 1.3E-51 T 25-04-2017 CLFO_RS02290 2d43bb7eae8b31a0e52f71bb8de5c6f7 273 Gene3D G3DSA:3.30.70.260 183 269 1.5E-28 T 25-04-2017 CLFO_RS02290 2d43bb7eae8b31a0e52f71bb8de5c6f7 273 SUPERFAMILY SSF55021 173 268 1.09E-24 T 25-04-2017 CLFO_RS02290 2d43bb7eae8b31a0e52f71bb8de5c6f7 273 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 217 224 - T 25-04-2017 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CLFO_RS02290 2d43bb7eae8b31a0e52f71bb8de5c6f7 273 Gene3D G3DSA:3.40.190.10 1 87 3.5E-26 T 25-04-2017 CLFO_RS02290 2d43bb7eae8b31a0e52f71bb8de5c6f7 273 Pfam PF00800 Prephenate dehydratase 4 178 1.6E-55 T 25-04-2017 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CLFO_RS02290 2d43bb7eae8b31a0e52f71bb8de5c6f7 273 Gene3D G3DSA:3.40.190.10 88 166 1.6E-21 T 25-04-2017 CLFO_RS15055 2c3a928333620ca7321dae7e25e6421d 282 Pfam PF02012 BNR/Asp-box repeat 233 242 0.0059 T 25-04-2017 IPR002860 BNR repeat CLFO_RS15055 2c3a928333620ca7321dae7e25e6421d 282 Pfam PF02012 BNR/Asp-box repeat 174 183 0.0059 T 25-04-2017 IPR002860 BNR repeat CLFO_RS15055 2c3a928333620ca7321dae7e25e6421d 282 Pfam PF02012 BNR/Asp-box repeat 115 124 0.0059 T 25-04-2017 IPR002860 BNR repeat CLFO_RS15055 2c3a928333620ca7321dae7e25e6421d 282 SUPERFAMILY SSF110296 29 251 7.59E-17 T 25-04-2017 CLFO_RS15055 2c3a928333620ca7321dae7e25e6421d 282 Gene3D G3DSA:2.120.10.10 31 262 1.8E-17 T 25-04-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 441 546 4.7E-20 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 Gene3D G3DSA:1.10.287.130 329 394 9.1E-22 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 Gene3D G3DSA:3.30.565.10 414 544 6.9E-30 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 339 391 3.4E-13 T 25-04-2017 CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 506 2.0E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 544 2.0E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 525 2.0E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 492 2.0E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 SUPERFAMILY SSF55874 436 544 8.25E-28 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 Pfam PF17203 Single cache domain 3 54 183 1.3E-17 T 25-04-2017 IPR033463 Single cache domain 3 CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 Pfam PF00989 PAS fold 235 312 9.2E-10 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 Gene3D G3DSA:3.30.450.20 237 328 3.5E-11 T 25-04-2017 CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 SUPERFAMILY SSF55890 340 394 1.16E-12 T 25-04-2017 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 Gene3D G3DSA:3.30.450.20 54 188 6.7E-39 T 25-04-2017 CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 SMART SM00387 437 547 5.5E-25 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 SUPERFAMILY SSF55785 237 316 3.81E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 SUPERFAMILY SSF103190 54 187 2.9E-31 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS13645 19cbb711d7f5432563ba4f808b23b712 556 SMART SM00091 232 298 8.3E-5 T 25-04-2017 IPR000014 PAS domain CLFO_RS10155 f31e1239005db7064ffedd83ae7bf155 202 Pfam PF00589 Phage integrase family 11 185 3.5E-21 T 25-04-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS10155 f31e1239005db7064ffedd83ae7bf155 202 Gene3D G3DSA:1.10.443.10 16 196 5.2E-31 T 25-04-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS10155 f31e1239005db7064ffedd83ae7bf155 202 SUPERFAMILY SSF56349 6 197 3.83E-35 T 25-04-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLFO_RS04055 cc844171a6e14237ce5e28b5847f54fe 261 SMART SM00382 37 217 1.0E-18 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04055 cc844171a6e14237ce5e28b5847f54fe 261 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS04055 cc844171a6e14237ce5e28b5847f54fe 261 Gene3D G3DSA:3.40.50.300 8 215 4.5E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04055 cc844171a6e14237ce5e28b5847f54fe 261 Pfam PF00005 ABC transporter 28 167 3.9E-35 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS04055 cc844171a6e14237ce5e28b5847f54fe 261 SUPERFAMILY SSF52540 9 224 2.66E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01390 f833392a715f5e1dfd0ac895bf3b90d0 330 Gene3D G3DSA:3.90.25.10 193 321 2.1E-32 T 25-04-2017 CLFO_RS01390 f833392a715f5e1dfd0ac895bf3b90d0 330 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 311 2.3E-69 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01390 f833392a715f5e1dfd0ac895bf3b90d0 330 TIGRFAM TIGR04180 EDH_00030: NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family 8 304 4.8E-154 T 25-04-2017 IPR026390 NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family CLFO_RS01390 f833392a715f5e1dfd0ac895bf3b90d0 330 SUPERFAMILY SSF51735 3 323 3.24E-89 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01390 f833392a715f5e1dfd0ac895bf3b90d0 330 Gene3D G3DSA:3.40.50.720 6 192 8.1E-61 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04805 ed3b5013d58c98160f51ff8bd2343ec9 261 SMART SM00825 Beta-ketoacyl synthase 16 261 1.9E-33 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04805 ed3b5013d58c98160f51ff8bd2343ec9 261 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 14 261 1.4E-91 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04805 ed3b5013d58c98160f51ff8bd2343ec9 261 SUPERFAMILY SSF53901 14 260 6.18E-78 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04805 ed3b5013d58c98160f51ff8bd2343ec9 261 Gene3D G3DSA:3.40.47.10 16 261 5.5E-91 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04805 ed3b5013d58c98160f51ff8bd2343ec9 261 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 175 191 - T 25-04-2017 IPR018201 Beta-ketoacyl synthase, active site CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 Pfam PF02743 Cache domain 37 263 2.1E-16 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 SUPERFAMILY SSF47384 338 426 1.1E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 Gene3D G3DSA:3.30.565.10 413 583 5.8E-45 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 SUPERFAMILY SSF158472 302 350 3.79E-7 T 25-04-2017 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 Pfam PF00672 HAMP domain 283 349 1.7E-10 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 SUPERFAMILY SSF55874 415 582 9.69E-44 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 581 2.7E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 523 2.7E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 537 2.7E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 562 2.7E-16 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 Gene3D G3DSA:1.10.287.130 344 412 5.9E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 SMART SM00387 472 584 2.5E-35 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 Gene3D G3DSA:3.30.450.20 83 163 6.5E-10 T 25-04-2017 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 473 582 1.3E-26 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 SUPERFAMILY SSF103190 64 181 8.63E-6 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 Gene3D G3DSA:3.30.450.20 164 274 4.2E-4 T 25-04-2017 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 SMART SM00304 301 353 1.0E-8 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 Pfam PF00512 His Kinase A (phospho-acceptor) domain 355 426 3.8E-12 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS19480 421686a12afe84294d3cabf7b6aea559 620 SMART SM00388 354 426 2.0E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS08295 2a59dd797973faaadb0ee71c981e8a90 238 Gene3D G3DSA:1.10.10.200 6 76 1.9E-28 T 25-04-2017 IPR017856 Integrase, N-terminal zinc-binding domain-like CLFO_RS08295 2a59dd797973faaadb0ee71c981e8a90 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 4 235 7.4E-92 T 25-04-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLFO_RS08295 2a59dd797973faaadb0ee71c981e8a90 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 2 237 33.801 T 25-04-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLFO_RS08295 2a59dd797973faaadb0ee71c981e8a90 238 Pfam PF01709 Transcriptional regulator 6 235 1.1E-92 T 25-04-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLFO_RS08295 2a59dd797973faaadb0ee71c981e8a90 238 Gene3D G3DSA:3.30.1270.10 210 236 2.1E-39 T 25-04-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLFO_RS08295 2a59dd797973faaadb0ee71c981e8a90 238 Gene3D G3DSA:3.30.1270.10 79 131 2.1E-39 T 25-04-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLFO_RS08295 2a59dd797973faaadb0ee71c981e8a90 238 SUPERFAMILY SSF75625 5 236 2.35E-89 T 25-04-2017 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLFO_RS08295 2a59dd797973faaadb0ee71c981e8a90 238 Gene3D G3DSA:3.30.70.980 132 203 1.2E-26 T 25-04-2017 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CLFO_RS12000 500c4c65f006add0e484b45fbd7a62f9 251 TIGRFAM TIGR01895 cas_Cas5t: CRISPR-associated protein Cas5, subtype I-B/TNEAP 1 177 2.3E-30 T 25-04-2017 IPR013337 CRISPR-associated protein Cas5, Tneap type CLFO_RS12000 500c4c65f006add0e484b45fbd7a62f9 251 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 3 43 1.6E-13 T 25-04-2017 IPR013422 CRISPR-associated protein Cas5, N-terminal CLFO_RS12000 500c4c65f006add0e484b45fbd7a62f9 251 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 161 9.9E-10 T 25-04-2017 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 CLFO_RS12655 7b544dc1592b130e2e01f2b1bfcf24a8 404 Pfam PF01411 tRNA synthetases class II (A) 32 78 9.4E-8 T 25-04-2017 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CLFO_RS12655 7b544dc1592b130e2e01f2b1bfcf24a8 404 SMART SM00863 185 227 6.7E-10 T 25-04-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CLFO_RS12655 7b544dc1592b130e2e01f2b1bfcf24a8 404 Pfam PF02272 DHHA1 domain 329 396 3.3E-9 T 25-04-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CLFO_RS12655 7b544dc1592b130e2e01f2b1bfcf24a8 404 SUPERFAMILY SSF50447 1 77 3.53E-15 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS12655 7b544dc1592b130e2e01f2b1bfcf24a8 404 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 185 225 4.5E-8 T 25-04-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CLFO_RS12655 7b544dc1592b130e2e01f2b1bfcf24a8 404 SUPERFAMILY SSF55186 93 232 2.49E-33 T 25-04-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CLFO_RS10235 bd02dffa43f416e1e2ebd2f1e3171d7b 516 Pfam PF10050 Predicted metal-binding protein (DUF2284) 373 515 4.8E-30 T 25-04-2017 IPR019271 Protein of unknown function DUF2284, metal-binding CLFO_RS10235 bd02dffa43f416e1e2ebd2f1e3171d7b 516 Pfam PF16864 Dimerisation domain 24 103 4.0E-16 T 25-04-2017 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain CLFO_RS10235 bd02dffa43f416e1e2ebd2f1e3171d7b 516 Gene3D G3DSA:3.40.50.150 116 341 2.2E-33 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10235 bd02dffa43f416e1e2ebd2f1e3171d7b 516 Gene3D G3DSA:1.10.10.10 20 96 4.8E-18 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10235 bd02dffa43f416e1e2ebd2f1e3171d7b 516 SUPERFAMILY SSF53335 115 332 1.92E-34 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10235 bd02dffa43f416e1e2ebd2f1e3171d7b 516 Pfam PF00891 O-methyltransferase 147 325 5.6E-19 T 25-04-2017 IPR001077 O-methyltransferase, family 2 GO:0008171 CLFO_RS10235 bd02dffa43f416e1e2ebd2f1e3171d7b 516 SUPERFAMILY SSF46785 22 101 2.6E-8 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS02075 d86273d3a25280663d655d3d1234e0f0 105 Gene3D G3DSA:1.10.1270.10 3 100 2.0E-45 T 25-04-2017 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 CLFO_RS02075 d86273d3a25280663d655d3d1234e0f0 105 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 8 95 1.2E-44 T 25-04-2017 IPR013368 TrpR homologue YerC/YecD CLFO_RS02075 d86273d3a25280663d655d3d1234e0f0 105 SUPERFAMILY SSF48295 5 96 7.32E-31 T 25-04-2017 IPR010921 Trp repressor/replication initiator GO:0043565 CLFO_RS02075 d86273d3a25280663d655d3d1234e0f0 105 Pfam PF01371 Trp repressor protein 13 95 1.4E-30 T 25-04-2017 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 CLFO_RS02075 d86273d3a25280663d655d3d1234e0f0 105 PIRSF PIRSF012508 1 101 2.8E-48 T 25-04-2017 IPR013368 TrpR homologue YerC/YecD CLFO_RS00660 f3f4178509df0393b4d9ffe936cc8081 759 Pfam PF07833 Copper amine oxidase N-terminal domain 665 757 2.0E-24 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS00660 f3f4178509df0393b4d9ffe936cc8081 759 Gene3D G3DSA:3.30.457.10 668 745 1.2E-17 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS00660 f3f4178509df0393b4d9ffe936cc8081 759 SUPERFAMILY SSF55383 667 753 3.01E-20 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS20930 c9c2fa8cdd717ef5e7592f6dd4d07604 434 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 64 258 2.1E-18 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS20930 c9c2fa8cdd717ef5e7592f6dd4d07604 434 SUPERFAMILY SSF56672 23 264 8.45E-11 T 25-04-2017 CLFO_RS01045 23343b58b0e8c631e072b68cc5fe50d5 183 Gene3D G3DSA:3.30.1330.30 3 127 1.2E-26 T 25-04-2017 IPR029064 50S ribosomal protein L30e-like CLFO_RS01045 23343b58b0e8c631e072b68cc5fe50d5 183 SUPERFAMILY SSF160515 4 128 3.27E-28 T 25-04-2017 CLFO_RS01045 23343b58b0e8c631e072b68cc5fe50d5 183 Pfam PF07997 Protein of unknown function (DUF1694) 5 118 8.2E-29 T 25-04-2017 IPR012543 Protein of unknown function DUF1694 CLFO_RS20865 c88295d142930a2af151e7bad9edeeb2 83 Pfam PF00805 Pentapeptide repeats (8 copies) 19 54 1.3E-10 T 25-04-2017 IPR001646 Pentapeptide repeat CLFO_RS20865 c88295d142930a2af151e7bad9edeeb2 83 SUPERFAMILY SSF141571 13 64 6.67E-12 T 25-04-2017 CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 354 434 8.4E-35 T 25-04-2017 IPR032859 GTPase Der, C-terminal KH-domain-like CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 SUPERFAMILY SSF52540 140 437 4.26E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 131 2.4E-27 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 344 5.1E-28 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 9.0E-181 T 25-04-2017 IPR016484 GTP-binding protein EngA GO:0005525 CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 Gene3D G3DSA:3.40.50.300 4 168 4.0E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 Gene3D G3DSA:3.40.50.300 173 359 5.9E-54 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 PIRSF PIRSF006485 2 440 5.7E-178 T 25-04-2017 IPR016484 GTP-binding protein EngA GO:0005525 CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 Hamap MF_00195 GTPase Der [der]. 3 437 41.474 T 25-04-2017 IPR016484 GTP-binding protein EngA GO:0005525 CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 1.3E-6 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 74 92 1.3E-6 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 Gene3D G3DSA:3.30.300.20 360 436 9.3E-37 T 25-04-2017 IPR015946 K homology domain-like, alpha/beta CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 SUPERFAMILY SSF52540 6 167 1.74E-44 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 Pfam PF01926 50S ribosome-binding GTPase 6 121 9.5E-30 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS11615 65ffe77f632d52d1d4e462adbbcb0a56 441 Pfam PF01926 50S ribosome-binding GTPase 178 296 5.5E-27 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS02945 b5c31b66aae5618fa639dabc239a247f 84 Gene3D G3DSA:1.20.5.40 1 29 5.9E-11 T 25-04-2017 CLFO_RS01405 f9a7090077357a1a045501d1a94b3bb3 76 SUPERFAMILY SSF47336 3 71 8.77E-10 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS01405 f9a7090077357a1a045501d1a94b3bb3 76 Gene3D G3DSA:1.10.1200.10 4 74 1.9E-10 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS01405 f9a7090077357a1a045501d1a94b3bb3 76 Pfam PF00550 Phosphopantetheine attachment site 5 69 2.6E-6 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 SUPERFAMILY SSF52540 349 594 5.0E-69 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 Gene3D G3DSA:3.40.50.300 347 523 4.4E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 437 452 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 SMART SM00382 370 518 2.6E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 374 387 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 SUPERFAMILY SSF46689 564 654 1.12E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 Pfam PF02954 Bacterial regulatory protein, Fis family 611 652 1.2E-14 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 Gene3D G3DSA:1.10.10.60 594 655 6.3E-17 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 Pfam PF00158 Sigma-54 interaction domain 350 517 7.7E-69 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 Pfam PF13426 PAS domain 234 328 2.2E-10 T 25-04-2017 IPR000014 PAS domain CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 564 573 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 Gene3D G3DSA:3.30.450.20 221 328 1.5E-16 T 25-04-2017 CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 SMART SM00091 223 290 2.1E-5 T 25-04-2017 IPR000014 PAS domain CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 Gene3D G3DSA:1.10.8.60 524 593 5.6E-23 T 25-04-2017 CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 635 655 5.7E-9 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 618 635 5.7E-9 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 223 335 1.5E-9 T 25-04-2017 IPR000014 PAS domain CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 SUPERFAMILY SSF55781 71 209 8.24E-6 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS02555 ecd7c1909cda20c7bd863fa5f3beb22a 656 SUPERFAMILY SSF55785 215 326 2.79E-13 T 25-04-2017 IPR000014 PAS domain CLFO_RS02155 bf69e0e95867c55db02f15934a1b8c32 299 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 74 298 4.1E-83 T 25-04-2017 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CLFO_RS02155 bf69e0e95867c55db02f15934a1b8c32 299 PIRSF PIRSF018982 49 299 7.9E-103 T 25-04-2017 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CLFO_RS02155 bf69e0e95867c55db02f15934a1b8c32 299 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 62 298 41.117 T 25-04-2017 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CLFO_RS15900 b3265652f9430b2f85c567c78cb2b2fd 332 SUPERFAMILY SSF52540 30 264 4.75E-68 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15900 b3265652f9430b2f85c567c78cb2b2fd 332 SMART SM00382 51 243 6.8E-15 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15900 b3265652f9430b2f85c567c78cb2b2fd 332 Pfam PF00005 ABC transporter 43 194 2.7E-34 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15900 b3265652f9430b2f85c567c78cb2b2fd 332 Gene3D G3DSA:3.40.50.300 16 267 5.5E-75 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15900 b3265652f9430b2f85c567c78cb2b2fd 332 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15900 b3265652f9430b2f85c567c78cb2b2fd 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 311 3.6E-14 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS15900 b3265652f9430b2f85c567c78cb2b2fd 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 243 330 4.8E-19 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 SUPERFAMILY SSF55681 117 420 2.94E-105 T 25-04-2017 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 399 3.0E-39 T 25-04-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 PIRSF PIRSF001529 1 425 9.6E-191 T 25-04-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 Gene3D G3DSA:3.30.930.10 106 419 1.7E-144 T 25-04-2017 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 Gene3D G3DSA:1.10.287.40 1 105 1.9E-28 T 25-04-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 1.5E-178 T 25-04-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 SUPERFAMILY SSF46589 1 113 8.89E-30 T 25-04-2017 IPR010978 tRNA-binding arm GO:0000166 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 2.7E-31 T 25-04-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 2.7E-31 T 25-04-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 2.7E-31 T 25-04-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 2.7E-31 T 25-04-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 2.7E-31 T 25-04-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 1.7E-30 T 25-04-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLFO_RS00130 282a07c97692a4965d208cc90e1fcd25 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 43.422 T 25-04-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CLFO_RS06060 48aeea5611ee96cfe8a14d0e3483853e 404 Gene3D G3DSA:1.20.1250.20 209 399 7.5E-19 T 25-04-2017 CLFO_RS06060 48aeea5611ee96cfe8a14d0e3483853e 404 Pfam PF07690 Major Facilitator Superfamily 20 358 9.3E-44 T 25-04-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLFO_RS06060 48aeea5611ee96cfe8a14d0e3483853e 404 SUPERFAMILY SSF103473 9 394 8.37E-68 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS06060 48aeea5611ee96cfe8a14d0e3483853e 404 Gene3D G3DSA:1.20.1250.20 12 196 2.0E-32 T 25-04-2017 CLFO_RS16325 db1d4fdeb623769732537f57e2f88cd5 122 Gene3D G3DSA:3.30.420.130 1 111 3.7E-30 T 25-04-2017 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLFO_RS16325 db1d4fdeb623769732537f57e2f88cd5 122 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 14 102 2.0E-20 T 25-04-2017 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLFO_RS16325 db1d4fdeb623769732537f57e2f88cd5 122 SUPERFAMILY SSF53146 1 121 1.7E-26 T 25-04-2017 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLFO_RS15810 b6d3e026916b756a230ed20ffadc5468 349 Gene3D G3DSA:3.10.580.10 3 114 4.9E-27 T 25-04-2017 CLFO_RS15810 b6d3e026916b756a230ed20ffadc5468 349 Pfam PF00571 CBS domain 9 53 4.1E-4 T 25-04-2017 IPR000644 CBS domain CLFO_RS15810 b6d3e026916b756a230ed20ffadc5468 349 Pfam PF00571 CBS domain 62 113 2.4E-5 T 25-04-2017 IPR000644 CBS domain CLFO_RS15810 b6d3e026916b756a230ed20ffadc5468 349 SUPERFAMILY SSF54631 8 55 8.47E-6 T 25-04-2017 CLFO_RS15810 b6d3e026916b756a230ed20ffadc5468 349 SMART SM00116 69 117 0.0018 T 25-04-2017 IPR000644 CBS domain CLFO_RS15810 b6d3e026916b756a230ed20ffadc5468 349 SMART SM00116 5 53 4.5 T 25-04-2017 IPR000644 CBS domain CLFO_RS15810 b6d3e026916b756a230ed20ffadc5468 349 Pfam PF00483 Nucleotidyl transferase 123 342 1.8E-37 T 25-04-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLFO_RS15810 b6d3e026916b756a230ed20ffadc5468 349 SUPERFAMILY SSF53448 47 348 5.63E-67 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS15810 b6d3e026916b756a230ed20ffadc5468 349 Gene3D G3DSA:3.90.550.10 122 344 1.3E-63 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS17170 509b50ed584d51a20fef54cda57b9956 81 Gene3D G3DSA:1.10.10.10 57 78 6.2E-4 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15880 e307f319f134d7485c84cb0ca59ecb4e 537 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 43 525 7.6E-125 T 25-04-2017 IPR011980 Periplasmic nickel-binding protein GO:0015675|GO:0016151|GO:0020037 CLFO_RS15880 e307f319f134d7485c84cb0ca59ecb4e 537 SUPERFAMILY SSF53850 45 526 7.6E-114 T 25-04-2017 CLFO_RS15880 e307f319f134d7485c84cb0ca59ecb4e 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 447 1.2E-84 T 25-04-2017 IPR000914 Solute-binding protein family 5 domain CLFO_RS15880 e307f319f134d7485c84cb0ca59ecb4e 537 Gene3D G3DSA:3.90.76.10 54 200 3.3E-30 T 25-04-2017 CLFO_RS15880 e307f319f134d7485c84cb0ca59ecb4e 537 PIRSF PIRSF002741 2 529 7.0E-90 T 25-04-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLFO_RS15880 e307f319f134d7485c84cb0ca59ecb4e 537 Gene3D G3DSA:3.40.190.10 201 301 4.1E-32 T 25-04-2017 CLFO_RS15880 e307f319f134d7485c84cb0ca59ecb4e 537 Gene3D G3DSA:3.10.105.10 302 501 1.0E-41 T 25-04-2017 CLFO_RS15880 e307f319f134d7485c84cb0ca59ecb4e 537 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 90 112 - T 25-04-2017 IPR023765 Solute-binding protein family 5, conserved site CLFO_RS06595 616f9338810386708f09cfc182f56f23 387 Gene3D G3DSA:3.40.640.10 55 268 1.2E-92 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS06595 616f9338810386708f09cfc182f56f23 387 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 17 377 2.9E-137 T 25-04-2017 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CLFO_RS06595 616f9338810386708f09cfc182f56f23 387 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 25-04-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CLFO_RS06595 616f9338810386708f09cfc182f56f23 387 Pfam PF00155 Aminotransferase class I and II 37 375 2.3E-72 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS06595 616f9338810386708f09cfc182f56f23 387 SUPERFAMILY SSF53383 3 384 2.13E-111 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS06595 616f9338810386708f09cfc182f56f23 387 Gene3D G3DSA:3.90.1150.10 269 380 4.8E-31 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS00105 b33176cbb17f6f882e7d3a0a0c920635 505 Pfam PF00890 FAD binding domain 10 377 2.3E-84 T 25-04-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS00105 b33176cbb17f6f882e7d3a0a0c920635 505 SUPERFAMILY SSF51905 341 400 1.08E-55 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS00105 b33176cbb17f6f882e7d3a0a0c920635 505 SUPERFAMILY SSF51905 6 249 1.08E-55 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS00105 b33176cbb17f6f882e7d3a0a0c920635 505 Pfam PF02910 Fumarate reductase flavoprotein C-term 431 502 5.2E-12 T 25-04-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS00105 b33176cbb17f6f882e7d3a0a0c920635 505 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 10 502 1.6E-159 T 25-04-2017 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 CLFO_RS00105 b33176cbb17f6f882e7d3a0a0c920635 505 SUPERFAMILY SSF56425 222 337 7.03E-41 T 25-04-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS00105 b33176cbb17f6f882e7d3a0a0c920635 505 SUPERFAMILY SSF46977 424 502 6.28E-17 T 25-04-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS00105 b33176cbb17f6f882e7d3a0a0c920635 505 Gene3D G3DSA:3.90.700.10 228 333 6.7E-40 T 25-04-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS00105 b33176cbb17f6f882e7d3a0a0c920635 505 Gene3D G3DSA:3.50.50.60 334 396 9.5E-90 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS00105 b33176cbb17f6f882e7d3a0a0c920635 505 Gene3D G3DSA:3.50.50.60 7 227 9.5E-90 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS00105 b33176cbb17f6f882e7d3a0a0c920635 505 PIRSF PIRSF000171 1 502 5.5E-35 T 25-04-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS00105 b33176cbb17f6f882e7d3a0a0c920635 505 Gene3D G3DSA:1.20.58.100 423 502 3.2E-20 T 25-04-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS21015 05aa66ad6a032faa72f97f4ae816e5c0 464 Pfam PF01551 Peptidase family M23 364 458 1.4E-36 T 25-04-2017 IPR016047 Peptidase M23 CLFO_RS21015 05aa66ad6a032faa72f97f4ae816e5c0 464 SUPERFAMILY SSF54106 205 248 2.35E-8 T 25-04-2017 IPR018392 LysM domain CLFO_RS21015 05aa66ad6a032faa72f97f4ae816e5c0 464 SUPERFAMILY SSF51261 327 461 4.34E-57 T 25-04-2017 IPR011055 Duplicated hybrid motif CLFO_RS21015 05aa66ad6a032faa72f97f4ae816e5c0 464 SMART SM00257 205 249 5.6E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS21015 05aa66ad6a032faa72f97f4ae816e5c0 464 Gene3D G3DSA:2.70.70.10 333 463 3.1E-51 T 25-04-2017 CLFO_RS21015 05aa66ad6a032faa72f97f4ae816e5c0 464 Pfam PF07501 G5 domain 264 334 4.4E-13 T 25-04-2017 IPR011098 G5 domain CLFO_RS21015 05aa66ad6a032faa72f97f4ae816e5c0 464 SMART SM01208 257 335 1.7E-13 T 25-04-2017 IPR011098 G5 domain CLFO_RS21015 05aa66ad6a032faa72f97f4ae816e5c0 464 Gene3D G3DSA:3.10.350.10 205 247 3.9E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS21015 05aa66ad6a032faa72f97f4ae816e5c0 464 Pfam PF01476 LysM domain 206 247 4.3E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS12440 bbfd2f179e931240645c0d8ab41cf062 91 Pfam PF07873 YabP family 26 89 5.0E-18 T 25-04-2017 IPR022476 Sporulation protein YabP/YqfC CLFO_RS12440 bbfd2f179e931240645c0d8ab41cf062 91 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 7 90 3.9E-30 T 25-04-2017 IPR022477 Sporulation protein YqfC CLFO_RS05310 1770bbcc0c8f28bd828b25ecf27aebed 360 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 3 355 1.9E-92 T 25-04-2017 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 CLFO_RS05310 1770bbcc0c8f28bd828b25ecf27aebed 360 Gene3D G3DSA:3.90.1150.10 255 359 3.0E-30 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS05310 1770bbcc0c8f28bd828b25ecf27aebed 360 SUPERFAMILY SSF53383 3 359 7.72E-76 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS05310 1770bbcc0c8f28bd828b25ecf27aebed 360 Gene3D G3DSA:3.40.640.10 35 254 1.2E-66 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS05310 1770bbcc0c8f28bd828b25ecf27aebed 360 Pfam PF00155 Aminotransferase class I and II 26 354 5.1E-46 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS00615 af3296d6c0c0e825c923a2c4238a6f45 139 Gene3D G3DSA:2.40.50.140 4 76 6.4E-26 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS00615 af3296d6c0c0e825c923a2c4238a6f45 139 SMART SM00316 4 74 8.4E-25 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS00615 af3296d6c0c0e825c923a2c4238a6f45 139 SUPERFAMILY SSF50249 4 81 4.19E-23 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS00615 af3296d6c0c0e825c923a2c4238a6f45 139 Pfam PF00575 S1 RNA binding domain 4 74 3.2E-20 T 25-04-2017 IPR003029 S1 domain GO:0003676 CLFO_RS07070 b92ff6836c0d1370e924e902bb4862c3 301 SUPERFAMILY SSF55120 81 299 5.28E-68 T 25-04-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS07070 b92ff6836c0d1370e924e902bb4862c3 301 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 301 1.1E-73 T 25-04-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS07070 b92ff6836c0d1370e924e902bb4862c3 301 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 25-04-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS07070 b92ff6836c0d1370e924e902bb4862c3 301 Pfam PF00849 RNA pseudouridylate synthase 94 245 5.9E-33 T 25-04-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS08240 7e5a1ca7b1b9a9edd5112632de06ae98 69 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 4 60 6.5E-5 T 25-04-2017 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLFO_RS17125 55d346c861f9f8fb087eb8544086256d 887 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 263 269 - T 25-04-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLFO_RS17125 55d346c861f9f8fb087eb8544086256d 887 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 97 454 1.2E-76 T 25-04-2017 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 CLFO_RS17125 55d346c861f9f8fb087eb8544086256d 887 Gene3D G3DSA:3.40.50.150 162 400 7.2E-37 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS17125 55d346c861f9f8fb087eb8544086256d 887 Pfam PF02384 N-6 DNA Methylase 137 448 2.9E-105 T 25-04-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CLFO_RS17125 55d346c861f9f8fb087eb8544086256d 887 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 260 272 3.0E-13 T 25-04-2017 CLFO_RS17125 55d346c861f9f8fb087eb8544086256d 887 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 188 202 3.0E-13 T 25-04-2017 CLFO_RS17125 55d346c861f9f8fb087eb8544086256d 887 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 160 176 3.0E-13 T 25-04-2017 CLFO_RS17125 55d346c861f9f8fb087eb8544086256d 887 SUPERFAMILY SSF53335 6 485 2.96E-124 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS17125 55d346c861f9f8fb087eb8544086256d 887 Pfam PF12161 HsdM N-terminal domain 8 122 8.4E-16 T 25-04-2017 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CLFO_RS12710 2485a301b69970c9cdf550d47f6246b1 235 SMART SM00382 29 217 1.2E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12710 2485a301b69970c9cdf550d47f6246b1 235 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS12710 2485a301b69970c9cdf550d47f6246b1 235 SUPERFAMILY SSF52540 1 223 1.6E-71 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12710 2485a301b69970c9cdf550d47f6246b1 235 Pfam PF00005 ABC transporter 20 168 2.4E-34 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS12710 2485a301b69970c9cdf550d47f6246b1 235 Gene3D G3DSA:3.40.50.300 2 219 1.9E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15510 abe9553500ce9b1174cdac6409e5993f 437 Pfam PF13726 Na+-H+ antiporter family 4 90 1.0E-25 T 25-04-2017 IPR032813 Putative Na+/H+ antiporter, N-terminal CLFO_RS15510 abe9553500ce9b1174cdac6409e5993f 437 Pfam PF03553 Na+/H+ antiporter family 144 431 3.8E-62 T 25-04-2017 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CLFO_RS13585 53c8ee8e5cb63230061247a07b85ced0 233 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 9 220 2.0E-32 T 25-04-2017 IPR010178 Integral membrane protein 1906 CLFO_RS13585 53c8ee8e5cb63230061247a07b85ced0 233 Pfam PF07314 Protein of unknown function (DUF1461) 9 193 1.9E-48 T 25-04-2017 IPR010178 Integral membrane protein 1906 CLFO_RS01555 41c2fa0b275540a9efb676bebe7c60a2 248 Gene3D G3DSA:3.30.1330.60 122 246 1.3E-32 T 25-04-2017 IPR006665 OmpA-like domain CLFO_RS01555 41c2fa0b275540a9efb676bebe7c60a2 248 Pfam PF00691 OmpA family 141 240 1.1E-20 T 25-04-2017 IPR006665 OmpA-like domain CLFO_RS01555 41c2fa0b275540a9efb676bebe7c60a2 248 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 14 61 8.2E-9 T 25-04-2017 IPR025713 Motility protein B, N-terminal domain CLFO_RS01555 41c2fa0b275540a9efb676bebe7c60a2 248 SUPERFAMILY SSF103088 130 246 1.7E-31 T 25-04-2017 IPR006665 OmpA-like domain CLFO_RS21130 def9b4c6d041f2c2dc6b65e7dc1c4855 90 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 10 89 1.9E-16 T 25-04-2017 IPR010001 SigmaK-factor processing regulatory BofA CLFO_RS21130 def9b4c6d041f2c2dc6b65e7dc1c4855 90 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 15 88 2.2E-21 T 25-04-2017 IPR010001 SigmaK-factor processing regulatory BofA CLFO_RS06485 3d4233ea2cac3aafc2df905db2cbe7c1 71 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 67 1.8E-17 T 25-04-2017 IPR010035 ThiS, thiamine-biosynthesis CLFO_RS06485 3d4233ea2cac3aafc2df905db2cbe7c1 71 SUPERFAMILY SSF54285 2 66 4.74E-15 T 25-04-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLFO_RS06485 3d4233ea2cac3aafc2df905db2cbe7c1 71 Gene3D G3DSA:3.10.20.30 1 67 8.4E-22 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS06485 3d4233ea2cac3aafc2df905db2cbe7c1 71 Pfam PF02597 ThiS family 6 67 4.5E-9 T 25-04-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CLFO_RS03725 02971570467631b77036cb41dbaee4ef 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 119 1.1E-9 T 25-04-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLFO_RS03725 02971570467631b77036cb41dbaee4ef 127 SUPERFAMILY SSF54593 2 124 2.01E-23 T 25-04-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLFO_RS03725 02971570467631b77036cb41dbaee4ef 127 Gene3D G3DSA:3.10.180.10 2 123 4.1E-24 T 25-04-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLFO_RS02450 c5aeed0b2bd9e2416a5c5bcfa0b395af 469 SUPERFAMILY SSF56762 4 455 4.19E-124 T 25-04-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS02450 c5aeed0b2bd9e2416a5c5bcfa0b395af 469 Pfam PF00374 Nickel-dependent hydrogenase 39 117 1.7E-23 T 25-04-2017 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CLFO_RS02450 c5aeed0b2bd9e2416a5c5bcfa0b395af 469 Pfam PF00374 Nickel-dependent hydrogenase 129 455 4.2E-78 T 25-04-2017 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CLFO_RS02450 c5aeed0b2bd9e2416a5c5bcfa0b395af 469 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 446 455 - T 25-04-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CLFO_RS02450 c5aeed0b2bd9e2416a5c5bcfa0b395af 469 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 25-04-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CLFO_RS02450 c5aeed0b2bd9e2416a5c5bcfa0b395af 469 Gene3D G3DSA:1.10.645.10 1 455 3.2E-146 T 25-04-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS08245 2c082b357766f695843d0f67b422cf15 466 PIRSF PIRSF006603 6 457 3.6E-78 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS08245 2c082b357766f695843d0f67b422cf15 466 TIGRFAM TIGR00797 matE: MATE efflux family protein 31 424 3.3E-51 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS08245 2c082b357766f695843d0f67b422cf15 466 Pfam PF01554 MatE 252 414 4.3E-21 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS08245 2c082b357766f695843d0f67b422cf15 466 Pfam PF01554 MatE 31 188 3.5E-24 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 Gene3D G3DSA:3.40.1380.20 326 468 3.1E-52 T 25-04-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 ProSitePatterns PS00110 Pyruvate kinase active site signature. 214 226 - T 25-04-2017 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 1.0E-189 T 25-04-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 SUPERFAMILY SSF51621 166 342 1.08E-102 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 SUPERFAMILY SSF51621 1 75 1.08E-102 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 SUPERFAMILY SSF50800 71 166 6.28E-28 T 25-04-2017 IPR011037 Pyruvate kinase-like, insert domain CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 SUPERFAMILY SSF52009 465 582 1.96E-31 T 25-04-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 Gene3D G3DSA:3.50.30.10 472 578 4.9E-28 T 25-04-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 Gene3D G3DSA:3.20.20.60 168 325 1.2E-114 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 Gene3D G3DSA:3.20.20.60 2 72 1.2E-114 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 Pfam PF00224 Pyruvate kinase, barrel domain 1 342 2.8E-150 T 25-04-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 Pfam PF00391 PEP-utilising enzyme, mobile domain 504 575 9.8E-23 T 25-04-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 SUPERFAMILY SSF52935 322 473 5.89E-42 T 25-04-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 Gene3D G3DSA:2.40.33.10 73 167 2.1E-32 T 25-04-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 PRINTS PR01050 Pyruvate kinase family signature 293 311 2.7E-81 T 25-04-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 PRINTS PR01050 Pyruvate kinase family signature 185 199 2.7E-81 T 25-04-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 PRINTS PR01050 Pyruvate kinase family signature 268 292 2.7E-81 T 25-04-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 PRINTS PR01050 Pyruvate kinase family signature 243 267 2.7E-81 T 25-04-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 PRINTS PR01050 Pyruvate kinase family signature 216 242 2.7E-81 T 25-04-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 PRINTS PR01050 Pyruvate kinase family signature 312 328 2.7E-81 T 25-04-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.7E-81 T 25-04-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS17430 c5f4bea7cc3b6ea0dfe9300f049e0504 585 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 468 1.3E-35 T 25-04-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CLFO_RS15095 173adb34dc384c57a94d66169d803915 211 Pfam PF03358 NADPH-dependent FMN reductase 1 156 2.4E-31 T 25-04-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLFO_RS15095 173adb34dc384c57a94d66169d803915 211 SUPERFAMILY SSF52218 1 193 1.04E-46 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS15095 173adb34dc384c57a94d66169d803915 211 Gene3D G3DSA:3.40.50.360 1 184 8.1E-43 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS11125 cb6c24b128e9d9d76466f67eaef650d7 437 SUPERFAMILY SSF52540 94 362 3.45E-98 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11125 cb6c24b128e9d9d76466f67eaef650d7 437 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 356 5.1E-75 T 25-04-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS11125 cb6c24b128e9d9d76466f67eaef650d7 437 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 90 5.0E-9 T 25-04-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS11125 cb6c24b128e9d9d76466f67eaef650d7 437 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 23 435 2.5E-204 T 25-04-2017 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS11125 cb6c24b128e9d9d76466f67eaef650d7 437 Gene3D G3DSA:3.40.50.300 94 358 2.6E-96 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11125 cb6c24b128e9d9d76466f67eaef650d7 437 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 435 9.9E-197 T 25-04-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CLFO_RS11125 cb6c24b128e9d9d76466f67eaef650d7 437 SMART SM00382 159 340 1.2E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS05115 f08631cd76619dbfa1a0c7b809a38065 286 SUPERFAMILY SSF51717 16 281 1.1E-100 T 25-04-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS05115 f08631cd76619dbfa1a0c7b809a38065 286 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 29 278 1.7E-98 T 25-04-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CLFO_RS05115 f08631cd76619dbfa1a0c7b809a38065 286 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 29 44 - T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS05115 f08631cd76619dbfa1a0c7b809a38065 286 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 63 76 - T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS05115 f08631cd76619dbfa1a0c7b809a38065 286 Pfam PF00809 Pterin binding enzyme 30 264 1.9E-86 T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS05115 f08631cd76619dbfa1a0c7b809a38065 286 Gene3D G3DSA:3.20.20.20 13 281 1.6E-111 T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS07420 a4e70433f2140b7bb469305160f7c774 137 Pfam PF09393 Phage tail tube protein 3 136 1.9E-15 T 25-04-2017 IPR018989 Phage tail tube protein CLFO_RS07420 a4e70433f2140b7bb469305160f7c774 137 SUPERFAMILY SSF69279 5 136 1.7E-15 T 25-04-2017 CLFO_RS12115 15fbdae022980b507cf56bddc1e4fc58 304 Gene3D G3DSA:3.40.50.300 4 193 8.7E-43 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12115 15fbdae022980b507cf56bddc1e4fc58 304 SMART SM00833 218 304 6.2E-4 T 25-04-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLFO_RS12115 15fbdae022980b507cf56bddc1e4fc58 304 Gene3D G3DSA:3.30.1220.10 217 304 6.0E-9 T 25-04-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLFO_RS12115 15fbdae022980b507cf56bddc1e4fc58 304 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 177 2.4E-34 T 25-04-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLFO_RS12115 15fbdae022980b507cf56bddc1e4fc58 304 SUPERFAMILY SSF90002 218 303 8.5E-10 T 25-04-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLFO_RS12115 15fbdae022980b507cf56bddc1e4fc58 304 SUPERFAMILY SSF52540 5 194 3.84E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12115 15fbdae022980b507cf56bddc1e4fc58 304 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 219 303 8.5E-9 T 25-04-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLFO_RS13410 42976d72d53013d76a66ba0c692f39f7 352 SMART SM00465 32 113 7.1E-17 T 25-04-2017 IPR000305 GIY-YIG nuclease superfamily CLFO_RS13410 42976d72d53013d76a66ba0c692f39f7 352 SUPERFAMILY SSF46600 206 241 2.88E-5 T 25-04-2017 IPR001943 UVR domain GO:0005515 CLFO_RS13410 42976d72d53013d76a66ba0c692f39f7 352 Gene3D G3DSA:3.40.1440.10 32 109 1.0E-7 T 25-04-2017 IPR027299 GIY-YIG domain CLFO_RS13410 42976d72d53013d76a66ba0c692f39f7 352 SUPERFAMILY SSF82771 32 114 6.54E-20 T 25-04-2017 IPR000305 GIY-YIG nuclease superfamily CLFO_RS13410 42976d72d53013d76a66ba0c692f39f7 352 Pfam PF01541 GIY-YIG catalytic domain 33 108 9.4E-10 T 25-04-2017 IPR000305 GIY-YIG nuclease superfamily CLFO_RS13410 42976d72d53013d76a66ba0c692f39f7 352 Pfam PF02151 UvrB/uvrC motif 208 235 6.9E-5 T 25-04-2017 IPR001943 UVR domain GO:0005515 CLFO_RS20270 0f7db0a3358fa30f17a077d03fabe7d1 431 SUPERFAMILY SSF55931 293 414 6.57E-36 T 25-04-2017 CLFO_RS20270 0f7db0a3358fa30f17a077d03fabe7d1 431 SUPERFAMILY SSF55931 19 261 6.57E-36 T 25-04-2017 CLFO_RS20270 0f7db0a3358fa30f17a077d03fabe7d1 431 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 64 312 1.2E-32 T 25-04-2017 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CLFO_RS20270 0f7db0a3358fa30f17a077d03fabe7d1 431 PIRSF PIRSF017901 2 422 1.1E-92 T 25-04-2017 CLFO_RS10130 989aa635dfec8f088369987e26608560 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 341 7.7E-14 T 25-04-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLFO_RS10130 989aa635dfec8f088369987e26608560 411 Gene3D G3DSA:2.40.50.100 69 101 1.6E-11 T 25-04-2017 CLFO_RS10130 989aa635dfec8f088369987e26608560 411 Gene3D G3DSA:2.40.50.100 223 254 1.6E-11 T 25-04-2017 CLFO_RS10130 989aa635dfec8f088369987e26608560 411 SUPERFAMILY SSF111369 66 149 3.01E-6 T 25-04-2017 CLFO_RS10130 989aa635dfec8f088369987e26608560 411 Pfam PF00529 HlyD membrane-fusion protein of T1SS 121 407 2.4E-6 T 25-04-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CLFO_RS11195 4b7568353792340f526535202cf6fc3e 203 Pfam PF01351 Ribonuclease HII 20 198 6.8E-32 T 25-04-2017 IPR024567 Ribonuclease HII/HIII domain CLFO_RS11195 4b7568353792340f526535202cf6fc3e 203 SUPERFAMILY SSF53098 6 197 2.12E-61 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS11195 4b7568353792340f526535202cf6fc3e 203 Hamap MF_00052_B Ribonuclease HII [rnhB]. 16 200 32.257 T 25-04-2017 IPR022898 Ribonuclease HII GO:0004523 CLFO_RS11195 4b7568353792340f526535202cf6fc3e 203 Gene3D G3DSA:3.30.420.10 17 161 6.7E-41 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS19875 504e663da3383461132271b52d75509c 464 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 455 1.2E-127 T 25-04-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CLFO_RS19875 504e663da3383461132271b52d75509c 464 SUPERFAMILY SSF52540 66 289 1.78E-37 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19875 504e663da3383461132271b52d75509c 464 Gene3D G3DSA:3.40.50.300 56 275 5.0E-38 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19875 504e663da3383461132271b52d75509c 464 SUPERFAMILY SSF54211 256 270 1.25E-24 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS19875 504e663da3383461132271b52d75509c 464 SUPERFAMILY SSF54211 306 459 1.25E-24 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS19875 504e663da3383461132271b52d75509c 464 PRINTS PR01874 DNA repair protein radA signature 214 242 1.4E-53 T 25-04-2017 CLFO_RS19875 504e663da3383461132271b52d75509c 464 PRINTS PR01874 DNA repair protein radA signature 249 275 1.4E-53 T 25-04-2017 CLFO_RS19875 504e663da3383461132271b52d75509c 464 PRINTS PR01874 DNA repair protein radA signature 325 348 1.4E-53 T 25-04-2017 CLFO_RS19875 504e663da3383461132271b52d75509c 464 PRINTS PR01874 DNA repair protein radA signature 121 138 1.4E-53 T 25-04-2017 CLFO_RS19875 504e663da3383461132271b52d75509c 464 PRINTS PR01874 DNA repair protein radA signature 9 33 1.4E-53 T 25-04-2017 CLFO_RS19875 504e663da3383461132271b52d75509c 464 PRINTS PR01874 DNA repair protein radA signature 79 107 1.4E-53 T 25-04-2017 CLFO_RS19875 504e663da3383461132271b52d75509c 464 Pfam PF13481 AAA domain 57 178 6.4E-13 T 25-04-2017 CLFO_RS19875 504e663da3383461132271b52d75509c 464 SMART SM00382 87 245 2.6E-7 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS19875 504e663da3383461132271b52d75509c 464 Gene3D G3DSA:3.30.230.10 292 459 5.6E-18 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS17145 92b84f1d718998ee7c5a09967fd95e5a 471 Pfam PF02384 N-6 DNA Methylase 235 446 3.5E-13 T 25-04-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CLFO_RS17145 92b84f1d718998ee7c5a09967fd95e5a 471 Gene3D G3DSA:3.40.50.150 261 458 1.3E-26 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS17145 92b84f1d718998ee7c5a09967fd95e5a 471 SUPERFAMILY SSF53335 126 467 2.28E-33 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS16410 c738ede125a7d4135e8f6f91a259f921 71 SUPERFAMILY SSF54506 25 66 1.1E-5 T 25-04-2017 CLFO_RS16410 c738ede125a7d4135e8f6f91a259f921 71 Gene3D G3DSA:3.10.310.10 30 58 1.4E-4 T 25-04-2017 CLFO_RS15135 d1199aaac46ca7a8aca80990b10f90ea 380 Gene3D G3DSA:1.10.1060.10 302 374 1.2E-8 T 25-04-2017 CLFO_RS15135 d1199aaac46ca7a8aca80990b10f90ea 380 PRINTS PR00069 Aldo-keto reductase signature 104 122 1.1E-5 T 25-04-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLFO_RS15135 d1199aaac46ca7a8aca80990b10f90ea 380 PRINTS PR00069 Aldo-keto reductase signature 139 156 1.1E-5 T 25-04-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLFO_RS15135 d1199aaac46ca7a8aca80990b10f90ea 380 PRINTS PR00069 Aldo-keto reductase signature 45 69 1.1E-5 T 25-04-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLFO_RS15135 d1199aaac46ca7a8aca80990b10f90ea 380 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 350 361 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS15135 d1199aaac46ca7a8aca80990b10f90ea 380 SUPERFAMILY SSF51430 1 329 9.04E-56 T 25-04-2017 IPR023210 NADP-dependent oxidoreductase domain CLFO_RS15135 d1199aaac46ca7a8aca80990b10f90ea 380 Gene3D G3DSA:3.20.20.100 1 301 1.1E-49 T 25-04-2017 IPR023210 NADP-dependent oxidoreductase domain CLFO_RS15135 d1199aaac46ca7a8aca80990b10f90ea 380 Pfam PF13534 4Fe-4S dicluster domain 299 365 7.5E-9 T 25-04-2017 CLFO_RS15135 d1199aaac46ca7a8aca80990b10f90ea 380 Pfam PF00248 Aldo/keto reductase family 16 270 9.4E-33 T 25-04-2017 IPR023210 NADP-dependent oxidoreductase domain CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.0E-21 T 25-04-2017 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 247 261 1.0E-21 T 25-04-2017 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 181 1.0E-21 T 25-04-2017 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 115 124 1.0E-21 T 25-04-2017 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 293 300 1.0E-21 T 25-04-2017 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 Gene3D G3DSA:3.50.50.60 167 323 3.5E-14 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 SUPERFAMILY SSF51905 3 323 7.05E-43 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.4E-22 T 25-04-2017 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 1.4E-22 T 25-04-2017 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.4E-22 T 25-04-2017 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 246 262 1.4E-22 T 25-04-2017 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 300 1.4E-22 T 25-04-2017 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 312 1.0E-32 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14150 92f09eb733c6c705bbd7e8bbe1255e9a 371 Gene3D G3DSA:3.50.50.60 3 166 2.2E-28 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18670 fd66311052fff8d2d6b045f0145ebb6e 214 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS18670 fd66311052fff8d2d6b045f0145ebb6e 214 Gene3D G3DSA:3.40.50.300 10 209 1.7E-57 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18670 fd66311052fff8d2d6b045f0145ebb6e 214 Pfam PF00005 ABC transporter 17 155 3.8E-31 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS18670 fd66311052fff8d2d6b045f0145ebb6e 214 SUPERFAMILY SSF52540 11 211 2.13E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18670 fd66311052fff8d2d6b045f0145ebb6e 214 SMART SM00382 22 205 5.4E-15 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS18405 fd06c9c475c1dcfb0f871fc5e018d593 396 Pfam PF03616 Sodium/glutamate symporter 3 365 8.4E-123 T 25-04-2017 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CLFO_RS18405 fd06c9c475c1dcfb0f871fc5e018d593 396 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 4 395 1.7E-115 T 25-04-2017 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CLFO_RS07490 c26ec20299ad87303d9458edf0177095 260 Gene3D G3DSA:3.40.630.40 4 198 2.7E-51 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS07490 c26ec20299ad87303d9458edf0177095 260 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 9 195 3.3E-47 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS07490 c26ec20299ad87303d9458edf0177095 260 SMART SM00646 65 195 5.6E-38 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS07490 c26ec20299ad87303d9458edf0177095 260 SUPERFAMILY SSF53187 5 199 2.51E-45 T 25-04-2017 CLFO_RS20830 6d424d35503af0220a4478ce481428b6 234 SMART SM00895 100 220 5.5E-18 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS20830 6d424d35503af0220a4478ce481428b6 234 SMART SM00345 16 75 1.8E-16 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20830 6d424d35503af0220a4478ce481428b6 234 SUPERFAMILY SSF48008 99 226 9.94E-23 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS20830 6d424d35503af0220a4478ce481428b6 234 Gene3D G3DSA:1.10.10.10 8 77 1.6E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20830 6d424d35503af0220a4478ce481428b6 234 Pfam PF07729 FCD domain 100 219 1.3E-17 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS20830 6d424d35503af0220a4478ce481428b6 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 2.2E-18 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20830 6d424d35503af0220a4478ce481428b6 234 SUPERFAMILY SSF46785 8 77 3.74E-19 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20830 6d424d35503af0220a4478ce481428b6 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 3.9E-7 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20830 6d424d35503af0220a4478ce481428b6 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 3.9E-7 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20830 6d424d35503af0220a4478ce481428b6 234 Gene3D G3DSA:1.20.120.530 98 229 6.4E-21 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS00400 cf506a2b63d7c740c46358ae71bfc334 255 Pfam PF05175 Methyltransferase small domain 35 172 2.7E-12 T 25-04-2017 IPR007848 Methyltransferase small domain GO:0008168 CLFO_RS00400 cf506a2b63d7c740c46358ae71bfc334 255 SUPERFAMILY SSF53335 11 213 8.67E-31 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS00400 cf506a2b63d7c740c46358ae71bfc334 255 Gene3D G3DSA:3.40.50.150 33 242 1.4E-74 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 Pfam PF00174 Oxidoreductase molybdopterin binding domain 48 217 8.4E-49 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 Gene3D G3DSA:3.90.420.10 11 231 5.6E-66 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 198 211 2.0E-20 T 25-04-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 182 195 2.0E-20 T 25-04-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 109 124 2.0E-20 T 25-04-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 165 181 2.0E-20 T 25-04-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 323 335 2.0E-20 T 25-04-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 13 27 2.0E-20 T 25-04-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 277 289 2.0E-20 T 25-04-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 33 49 2.0E-20 T 25-04-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 238 354 5.9E-18 T 25-04-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 SUPERFAMILY SSF56524 10 230 3.4E-61 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 SUPERFAMILY SSF81296 241 354 1.54E-30 T 25-04-2017 IPR014756 Immunoglobulin E-set CLFO_RS14165 2ab9aee59b080450ac31773f5e2051c1 356 Gene3D G3DSA:2.60.40.650 241 355 1.4E-31 T 25-04-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 CLFO_RS06730 84d3f1f79d9df0faf55fe555ce0fb922 336 SUPERFAMILY SSF53822 62 333 1.02E-86 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS06730 84d3f1f79d9df0faf55fe555ce0fb922 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.9E-5 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS06730 84d3f1f79d9df0faf55fe555ce0fb922 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.9E-5 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS06730 84d3f1f79d9df0faf55fe555ce0fb922 336 SMART SM00354 2 73 1.4E-27 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS06730 84d3f1f79d9df0faf55fe555ce0fb922 336 SUPERFAMILY SSF47413 2 61 1.31E-14 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS06730 84d3f1f79d9df0faf55fe555ce0fb922 336 Gene3D G3DSA:3.40.50.2300 176 312 3.6E-50 T 25-04-2017 CLFO_RS06730 84d3f1f79d9df0faf55fe555ce0fb922 336 Gene3D G3DSA:3.40.50.2300 56 175 2.7E-47 T 25-04-2017 CLFO_RS06730 84d3f1f79d9df0faf55fe555ce0fb922 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 50 3.8E-15 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS06730 84d3f1f79d9df0faf55fe555ce0fb922 336 Gene3D G3DSA:1.10.260.40 3 55 3.2E-20 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS06730 84d3f1f79d9df0faf55fe555ce0fb922 336 Pfam PF13377 Periplasmic binding protein-like domain 172 331 9.1E-34 T 25-04-2017 CLFO_RS06730 84d3f1f79d9df0faf55fe555ce0fb922 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 25-04-2017 CLFO_RS13055 19ae7f13c9fc369d28d69d0eaaecaaf4 300 SUPERFAMILY SSF161098 61 286 3.4E-61 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS13055 19ae7f13c9fc369d28d69d0eaaecaaf4 300 Gene3D G3DSA:1.10.3720.10 67 292 4.7E-63 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS13055 19ae7f13c9fc369d28d69d0eaaecaaf4 300 SUPERFAMILY SSF160964 13 46 1.7E-5 T 25-04-2017 CLFO_RS13055 19ae7f13c9fc369d28d69d0eaaecaaf4 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 289 1.6E-20 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS13055 19ae7f13c9fc369d28d69d0eaaecaaf4 300 Gene3D G3DSA:1.20.58.370 13 46 2.9E-5 T 25-04-2017 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 226 1.3E-26 T 25-04-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 208 1.3E-26 T 25-04-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 1.3E-26 T 25-04-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 1.3E-26 T 25-04-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 SUPERFAMILY SSF50249 5 113 6.0E-32 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 6 586 5.6E-250 T 25-04-2017 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 124 561 4.0E-109 T 25-04-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 SUPERFAMILY SSF55261 295 421 4.41E-43 T 25-04-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 Gene3D G3DSA:2.40.50.140 6 112 3.0E-37 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 Gene3D G3DSA:3.30.1360.30 283 415 8.2E-49 T 25-04-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 Pfam PF02938 GAD domain 314 408 8.6E-30 T 25-04-2017 IPR029351 GAD domain Reactome: R-HSA-379726 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 Gene3D G3DSA:3.30.930.10 138 282 5.3E-113 T 25-04-2017 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 Gene3D G3DSA:3.30.930.10 416 588 5.3E-113 T 25-04-2017 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 6 566 36.546 T 25-04-2017 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 Pfam PF01336 OB-fold nucleic acid binding domain 23 106 3.2E-14 T 25-04-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 SUPERFAMILY SSF55681 111 298 3.5E-108 T 25-04-2017 CLFO_RS09010 1f6d593a977ce10a28b228e9e45327c7 589 SUPERFAMILY SSF55681 427 587 3.5E-108 T 25-04-2017 CLFO_RS03060 92d0746dd5a8ef3abcb2edd2d2ca0560 53 SUPERFAMILY SSF57802 1 52 1.85E-23 T 25-04-2017 CLFO_RS03060 92d0746dd5a8ef3abcb2edd2d2ca0560 53 Gene3D G3DSA:2.20.28.10 1 51 4.5E-28 T 25-04-2017 IPR004039 Rubredoxin-type fold CLFO_RS03060 92d0746dd5a8ef3abcb2edd2d2ca0560 53 PIRSF PIRSF000071 1 53 3.5E-28 T 25-04-2017 IPR024922 Rubredoxin GO:0005506|GO:0009055 CLFO_RS03060 92d0746dd5a8ef3abcb2edd2d2ca0560 53 PRINTS PR00163 Rubredoxin signature 33 49 1.6E-12 T 25-04-2017 IPR024935 Rubredoxin domain GO:0005506 CLFO_RS03060 92d0746dd5a8ef3abcb2edd2d2ca0560 53 PRINTS PR00163 Rubredoxin signature 3 19 1.6E-12 T 25-04-2017 IPR024935 Rubredoxin domain GO:0005506 CLFO_RS03060 92d0746dd5a8ef3abcb2edd2d2ca0560 53 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 25-04-2017 IPR018527 Rubredoxin, iron-binding site GO:0046872 CLFO_RS03060 92d0746dd5a8ef3abcb2edd2d2ca0560 53 Pfam PF00301 Rubredoxin 3 49 8.0E-25 T 25-04-2017 IPR024935 Rubredoxin domain GO:0005506 CLFO_RS13725 03913fdcff7a0b77994507386715509c 411 Gene3D G3DSA:2.40.340.10 335 405 5.2E-7 T 25-04-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS13725 03913fdcff7a0b77994507386715509c 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 169 7.6E-36 T 25-04-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS13725 03913fdcff7a0b77994507386715509c 411 SUPERFAMILY SSF53218 177 324 7.59E-41 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS13725 03913fdcff7a0b77994507386715509c 411 Gene3D G3DSA:3.40.980.10 165 334 9.6E-62 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS13725 03913fdcff7a0b77994507386715509c 411 SMART SM00852 182 320 2.9E-41 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS13725 03913fdcff7a0b77994507386715509c 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 178 316 4.2E-33 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS13725 03913fdcff7a0b77994507386715509c 411 SUPERFAMILY SSF63867 332 404 5.23E-11 T 25-04-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS13725 03913fdcff7a0b77994507386715509c 411 Gene3D G3DSA:2.170.190.11 47 132 2.2E-30 T 25-04-2017 CLFO_RS13725 03913fdcff7a0b77994507386715509c 411 SUPERFAMILY SSF63882 5 178 2.09E-53 T 25-04-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS13725 03913fdcff7a0b77994507386715509c 411 Pfam PF03454 MoeA C-terminal region (domain IV) 335 404 5.0E-8 T 25-04-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS13725 03913fdcff7a0b77994507386715509c 411 Gene3D G3DSA:3.90.105.10 133 164 2.9E-18 T 25-04-2017 CLFO_RS13725 03913fdcff7a0b77994507386715509c 411 Pfam PF00994 Probable molybdopterin binding domain 182 318 4.9E-29 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 22 239 2.0E-79 T 25-04-2017 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 SUPERFAMILY SSF88946 5 94 3.3E-26 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 49 62 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 PIRSF PIRSF000770 2 241 1.9E-51 T 25-04-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 Gene3D G3DSA:1.10.601.10 5 86 3.2E-19 T 25-04-2017 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 Gene3D G3DSA:1.10.10.10 178 239 2.2E-16 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 SUPERFAMILY SSF88659 95 160 9.16E-15 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 238 2.3E-34 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 Gene3D G3DSA:1.10.10.10 94 144 1.4E-8 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 209 235 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 Pfam PF04539 Sigma-70 region 3 105 174 1.9E-9 T 25-04-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 Pfam PF04542 Sigma-70 region 2 22 94 1.7E-13 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 Pfam PF04545 Sigma-70, region 4 189 236 3.6E-20 T 25-04-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 SUPERFAMILY SSF88659 167 239 1.78E-21 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 PRINTS PR00046 Major sigma-70 factor signature 209 224 5.3E-13 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 PRINTS PR00046 Major sigma-70 factor signature 49 62 5.3E-13 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 PRINTS PR00046 Major sigma-70 factor signature 224 235 5.3E-13 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS10985 057138fde07e969d6a441b9c5cf06e4e 242 PRINTS PR00046 Major sigma-70 factor signature 192 204 5.3E-13 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07045 5a95cf697c6f83e8ff228c5ca883be02 156 Pfam PF04073 Aminoacyl-tRNA editing domain 44 140 4.0E-17 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS07045 5a95cf697c6f83e8ff228c5ca883be02 156 SUPERFAMILY SSF55826 2 153 2.35E-27 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS07045 5a95cf697c6f83e8ff228c5ca883be02 156 Gene3D G3DSA:3.90.960.10 2 154 8.3E-34 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 423 31.586 T 25-04-2017 IPR026593 Protein translocase subunit SecY CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 25-04-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 Gene3D G3DSA:1.10.3370.10 2 424 2.7E-160 T 25-04-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 305 327 1.6E-101 T 25-04-2017 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 168 191 1.6E-101 T 25-04-2017 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 392 410 1.6E-101 T 25-04-2017 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 1.6E-101 T 25-04-2017 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 1.6E-101 T 25-04-2017 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 142 167 1.6E-101 T 25-04-2017 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 360 378 1.6E-101 T 25-04-2017 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 1.6E-101 T 25-04-2017 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 260 279 1.6E-101 T 25-04-2017 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 PIRSF PIRSF004557 1 424 5.9E-129 T 25-04-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 SUPERFAMILY SSF103491 2 414 1.96E-130 T 25-04-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 ProSitePatterns PS00756 Protein secY signature 2. 161 178 - T 25-04-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 Pfam PF00344 SecY translocase 69 407 1.2E-123 T 25-04-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLFO_RS19605 38cd017bb6e695a732181625bdbc31a6 424 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 418 4.2E-130 T 25-04-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CLFO_RS12780 61eee488566a18d0b6c174cdac76117f 94 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 87 2.5E-9 T 25-04-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CLFO_RS12780 61eee488566a18d0b6c174cdac76117f 94 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 94 5.0E-19 T 25-04-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CLFO_RS12780 61eee488566a18d0b6c174cdac76117f 94 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 94 16.501 T 25-04-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CLFO_RS12780 61eee488566a18d0b6c174cdac76117f 94 SUPERFAMILY SSF141000 2 92 1.57E-17 T 25-04-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 SUPERFAMILY SSF53067 5 173 4.1E-73 T 25-04-2017 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 PIRSF PIRSF036458 3 358 1.7E-174 T 25-04-2017 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 Gene3D G3DSA:3.30.420.40 182 342 1.3E-48 T 25-04-2017 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 6 356 7.5E-176 T 25-04-2017 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 25-04-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 Pfam PF00871 Acetokinase family 7 354 1.9E-76 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 Gene3D G3DSA:3.30.420.40 5 181 8.4E-87 T 25-04-2017 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 SUPERFAMILY SSF53067 118 349 1.0E-58 T 25-04-2017 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 181 198 - T 25-04-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 Hamap MF_00542 Probable butyrate kinase [buk]. 1 358 174.042 T 25-04-2017 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 PRINTS PR00471 Acetate kinase family signature 276 289 2.8E-16 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 PRINTS PR00471 Acetate kinase family signature 299 315 2.8E-16 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 PRINTS PR00471 Acetate kinase family signature 7 18 2.8E-16 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS18880 b82843be5c6fb62ef12442cf1d1f77c8 358 PRINTS PR00471 Acetate kinase family signature 181 202 2.8E-16 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS16220 dac60b959ddcaf810301514e1ca35a8c 135 Gene3D G3DSA:1.10.10.10 7 84 4.8E-14 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16220 dac60b959ddcaf810301514e1ca35a8c 135 Pfam PF03965 Penicillinase repressor 8 128 8.5E-15 T 25-04-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLFO_RS16220 dac60b959ddcaf810301514e1ca35a8c 135 SUPERFAMILY SSF46785 6 129 3.89E-11 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13285 fb35c65959aceea03f072f3a58c9b23e 300 Pfam PF14285 Domain of unknown function (DUF4367) 193 299 7.1E-9 T 25-04-2017 IPR025377 Domain of unknown function DUF4367 CLFO_RS02395 e67e94b1e5ff5ba936827e5c82346699 161 SUPERFAMILY SSF56300 4 158 3.32E-38 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS02395 e67e94b1e5ff5ba936827e5c82346699 161 Gene3D G3DSA:3.60.21.10 3 160 7.3E-36 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS02395 e67e94b1e5ff5ba936827e5c82346699 161 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 5 153 6.7E-27 T 25-04-2017 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CLFO_RS02395 e67e94b1e5ff5ba936827e5c82346699 161 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 5 153 8.1E-29 T 25-04-2017 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 CLFO_RS01575 488692dda95bbfbc72fac2ff617816b8 63 Gene3D G3DSA:3.30.429.20 1 60 2.9E-15 T 25-04-2017 CLFO_RS01575 488692dda95bbfbc72fac2ff617816b8 63 SUPERFAMILY SSF55331 4 58 3.24E-11 T 25-04-2017 IPR014347 Tautomerase/MIF superfamily CLFO_RS01575 488692dda95bbfbc72fac2ff617816b8 63 Pfam PF01361 Tautomerase enzyme 2 58 8.3E-13 T 25-04-2017 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CLFO_RS07275 537f7e40f40a1ddbd53726773b0003ca 157 Pfam PF06114 Domain of unknown function (DUF955) 24 125 4.1E-7 T 25-04-2017 IPR010359 HTH domain, IrrE-type CLFO_RS12940 a51e5238963eaf955ce3dd05f59f5ca4 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 316 1.6E-76 T 25-04-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CLFO_RS12940 a51e5238963eaf955ce3dd05f59f5ca4 338 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 39 279 1.6E-64 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS12940 a51e5238963eaf955ce3dd05f59f5ca4 338 PIRSF PIRSF006470 3 334 3.7E-74 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS14960 92542f150cb7151df2ec21c57c99e23a 263 SUPERFAMILY SSF52540 2 229 1.01E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14960 92542f150cb7151df2ec21c57c99e23a 263 Gene3D G3DSA:3.40.50.300 1 230 1.6E-54 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14960 92542f150cb7151df2ec21c57c99e23a 263 Pfam PF00005 ABC transporter 22 176 1.2E-25 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS14960 92542f150cb7151df2ec21c57c99e23a 263 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS14960 92542f150cb7151df2ec21c57c99e23a 263 SMART SM00382 31 225 1.9E-8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS18085 8623901406c62486912abd4155a7404c 529 Gene3D G3DSA:3.50.50.60 474 525 2.3E-33 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18085 8623901406c62486912abd4155a7404c 529 Gene3D G3DSA:3.50.50.60 99 291 2.3E-33 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18085 8623901406c62486912abd4155a7404c 529 SUPERFAMILY SSF51905 468 525 3.44E-33 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18085 8623901406c62486912abd4155a7404c 529 SUPERFAMILY SSF51905 99 292 3.44E-33 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18085 8623901406c62486912abd4155a7404c 529 Pfam PF01134 Glucose inhibited division protein A 99 261 5.0E-5 T 25-04-2017 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CLFO_RS18085 8623901406c62486912abd4155a7404c 529 PIRSF PIRSF038984 1 529 3.5E-242 T 25-04-2017 IPR028348 FAD dependent protein CLFO_RS04070 99b3f1421b841e2e20ae41f77b312791 244 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 16 208 1.4E-41 T 25-04-2017 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 CLFO_RS04070 99b3f1421b841e2e20ae41f77b312791 244 Pfam PF02361 Cobalt transport protein 10 212 5.9E-33 T 25-04-2017 IPR003339 ABC/ECF transporter, transmembrane component CLFO_RS05720 b7c3b7d58d19c107f1d489c4da023639 313 Gene3D G3DSA:1.10.101.10 103 151 1.4E-5 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS05720 b7c3b7d58d19c107f1d489c4da023639 313 Gene3D G3DSA:2.40.440.10 165 295 5.3E-36 T 25-04-2017 CLFO_RS05720 b7c3b7d58d19c107f1d489c4da023639 313 Pfam PF03734 L,D-transpeptidase catalytic domain 170 295 7.9E-21 T 25-04-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CLFO_RS05720 b7c3b7d58d19c107f1d489c4da023639 313 SUPERFAMILY SSF141523 165 295 3.4E-33 T 25-04-2017 CLFO_RS19665 30e506e231cc94d6c0fe215c966a0c07 67 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 25-04-2017 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19665 30e506e231cc94d6c0fe215c966a0c07 67 Gene3D G3DSA:1.10.287.310 1 63 3.5E-32 T 25-04-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19665 30e506e231cc94d6c0fe215c966a0c07 67 SUPERFAMILY SSF46561 1 63 1.01E-24 T 25-04-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19665 30e506e231cc94d6c0fe215c966a0c07 67 Pfam PF00831 Ribosomal L29 protein 5 60 9.2E-28 T 25-04-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19665 30e506e231cc94d6c0fe215c966a0c07 67 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.806 T 25-04-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19665 30e506e231cc94d6c0fe215c966a0c07 67 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 5.7E-26 T 25-04-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS08975 51862d419d2f42c9438a74ff762f7bc2 557 Gene3D G3DSA:3.90.1200.10 240 315 2.0E-8 T 25-04-2017 CLFO_RS08975 51862d419d2f42c9438a74ff762f7bc2 557 Pfam PF03109 ABC1 family 114 232 1.4E-37 T 25-04-2017 IPR004147 UbiB domain CLFO_RS08975 51862d419d2f42c9438a74ff762f7bc2 557 SUPERFAMILY SSF56112 96 159 7.34E-30 T 25-04-2017 IPR011009 Protein kinase-like domain CLFO_RS08975 51862d419d2f42c9438a74ff762f7bc2 557 SUPERFAMILY SSF56112 194 333 7.34E-30 T 25-04-2017 IPR011009 Protein kinase-like domain CLFO_RS11580 928407ee5da196ffde3ccf24db0172b4 159 Gene3D G3DSA:3.40.50.1390 20 150 1.8E-25 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS11580 928407ee5da196ffde3ccf24db0172b4 159 SMART SM00857 21 159 4.7E-31 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS11580 928407ee5da196ffde3ccf24db0172b4 159 SUPERFAMILY SSF53041 20 155 1.1E-27 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS11580 928407ee5da196ffde3ccf24db0172b4 159 Pfam PF00239 Resolvase, N terminal domain 21 156 8.5E-25 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS00335 f8f1720090d35d383aba5541511b1ec7 237 Gene3D G3DSA:3.40.1010.10 1 128 1.2E-36 T 25-04-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00335 f8f1720090d35d383aba5541511b1ec7 237 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 214 9.6E-54 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00335 f8f1720090d35d383aba5541511b1ec7 237 SUPERFAMILY SSF53790 1 231 2.22E-50 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00335 f8f1720090d35d383aba5541511b1ec7 237 PIRSF PIRSF036427 1 234 3.2E-76 T 25-04-2017 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 CLFO_RS00335 f8f1720090d35d383aba5541511b1ec7 237 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 231 4.5E-74 T 25-04-2017 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 CLFO_RS03625 6649db92e7515385ac2e6457fdc57917 241 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 195 6.7E-32 T 25-04-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CLFO_RS03625 6649db92e7515385ac2e6457fdc57917 241 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 193 9.7E-21 T 25-04-2017 CLFO_RS03625 6649db92e7515385ac2e6457fdc57917 241 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 206 3.1E-54 T 25-04-2017 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial CLFO_RS03625 6649db92e7515385ac2e6457fdc57917 241 Gene3D G3DSA:3.40.50.1000 82 213 8.6E-34 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS03625 6649db92e7515385ac2e6457fdc57917 241 SUPERFAMILY SSF56784 1 231 2.03E-30 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS15200 873922dde8efba70243406ea7cddd0cf 371 SUPERFAMILY SSF55874 247 360 8.58E-11 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15200 873922dde8efba70243406ea7cddd0cf 371 Pfam PF07730 Histidine kinase 176 241 5.8E-18 T 25-04-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CLFO_RS02905 ec2cc2169d85567f48c864ce61abeb9c 336 Gene3D G3DSA:3.30.70.260 238 332 3.6E-26 T 25-04-2017 CLFO_RS02905 ec2cc2169d85567f48c864ce61abeb9c 336 SMART SM00382 30 227 2.8E-18 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS02905 ec2cc2169d85567f48c864ce61abeb9c 336 SUPERFAMILY SSF55021 248 332 8.97E-20 T 25-04-2017 CLFO_RS02905 ec2cc2169d85567f48c864ce61abeb9c 336 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS02905 ec2cc2169d85567f48c864ce61abeb9c 336 SMART SM00930 258 333 1.1E-23 T 25-04-2017 IPR018449 NIL domain CLFO_RS02905 ec2cc2169d85567f48c864ce61abeb9c 336 SUPERFAMILY SSF52540 1 239 1.56E-84 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02905 ec2cc2169d85567f48c864ce61abeb9c 336 Pfam PF09383 NIL domain 261 331 4.5E-19 T 25-04-2017 IPR018449 NIL domain CLFO_RS02905 ec2cc2169d85567f48c864ce61abeb9c 336 Pfam PF00005 ABC transporter 23 169 1.7E-38 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS02905 ec2cc2169d85567f48c864ce61abeb9c 336 Gene3D G3DSA:3.40.50.300 2 237 4.4E-86 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19360 12eae0cfa39e7ce1701fad1e04734b66 393 PIRSF PIRSF005243 1 393 1.7E-129 T 25-04-2017 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CLFO_RS19360 12eae0cfa39e7ce1701fad1e04734b66 393 SUPERFAMILY SSF52218 250 392 2.17E-34 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS19360 12eae0cfa39e7ce1701fad1e04734b66 393 Pfam PF00753 Metallo-beta-lactamase superfamily 35 178 4.3E-9 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS19360 12eae0cfa39e7ce1701fad1e04734b66 393 SUPERFAMILY SSF56281 10 284 3.41E-45 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS19360 12eae0cfa39e7ce1701fad1e04734b66 393 Gene3D G3DSA:3.40.50.360 248 391 2.3E-39 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS19360 12eae0cfa39e7ce1701fad1e04734b66 393 Gene3D G3DSA:3.60.15.10 1 240 1.7E-82 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS19360 12eae0cfa39e7ce1701fad1e04734b66 393 SMART SM00849 34 221 1.4E-23 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS04845 f5ead106b55803298d5098bc091f9297 263 Gene3D G3DSA:3.90.470.20 137 227 6.7E-10 T 25-04-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CLFO_RS04845 f5ead106b55803298d5098bc091f9297 263 SUPERFAMILY SSF56214 36 118 2.75E-9 T 25-04-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CLFO_RS04845 f5ead106b55803298d5098bc091f9297 263 SUPERFAMILY SSF56214 126 230 1.83E-12 T 25-04-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CLFO_RS04845 f5ead106b55803298d5098bc091f9297 263 Gene3D G3DSA:3.90.470.20 35 136 6.0E-11 T 25-04-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CLFO_RS04845 f5ead106b55803298d5098bc091f9297 263 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 128 227 2.9E-8 T 25-04-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CLFO_RS14890 f41bb335913cc33a46356924f5f638a4 265 SUPERFAMILY SSF51621 4 265 8.64E-112 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS14890 f41bb335913cc33a46356924f5f638a4 265 PIRSF PIRSF000388 1 265 3.6E-118 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS14890 f41bb335913cc33a46356924f5f638a4 265 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 260 3.5E-120 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS14890 f41bb335913cc33a46356924f5f638a4 265 Gene3D G3DSA:3.20.20.60 2 265 9.0E-123 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS14890 f41bb335913cc33a46356924f5f638a4 265 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 4 265 1.6E-109 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS14890 f41bb335913cc33a46356924f5f638a4 265 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 265 45.333 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS04015 a26e9d4adf053ffb95d70e484df55a1f 225 Gene3D G3DSA:1.10.10.10 127 223 6.4E-34 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS04015 a26e9d4adf053ffb95d70e484df55a1f 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 222 2.5E-25 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS04015 a26e9d4adf053ffb95d70e484df55a1f 225 SMART SM00448 2 112 1.3E-45 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS04015 a26e9d4adf053ffb95d70e484df55a1f 225 SUPERFAMILY SSF52172 1 129 2.99E-43 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS04015 a26e9d4adf053ffb95d70e484df55a1f 225 SMART SM00862 147 222 7.6E-24 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS04015 a26e9d4adf053ffb95d70e484df55a1f 225 SUPERFAMILY SSF46894 127 223 2.83E-30 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS04015 a26e9d4adf053ffb95d70e484df55a1f 225 Pfam PF00072 Response regulator receiver domain 4 113 9.1E-30 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS04015 a26e9d4adf053ffb95d70e484df55a1f 225 Gene3D G3DSA:3.40.50.2300 1 125 1.9E-41 T 25-04-2017 CLFO_RS15950 3953c7982247877cb5684590ba1c7b52 418 Pfam PF13660 Domain of unknown function (DUF4147) 8 230 1.3E-74 T 25-04-2017 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 CLFO_RS15950 3953c7982247877cb5684590ba1c7b52 418 SUPERFAMILY SSF82544 2 416 9.02E-137 T 25-04-2017 CLFO_RS15950 3953c7982247877cb5684590ba1c7b52 418 Pfam PF05161 MOFRL family 306 411 2.6E-36 T 25-04-2017 IPR007835 MOFRL domain Reactome: R-HSA-70350 CLFO_RS15950 3953c7982247877cb5684590ba1c7b52 418 Gene3D G3DSA:3.40.50.10180 8 237 4.2E-82 T 25-04-2017 CLFO_RS15950 3953c7982247877cb5684590ba1c7b52 418 Gene3D G3DSA:3.40.1480.10 238 417 3.5E-63 T 25-04-2017 IPR007835 MOFRL domain Reactome: R-HSA-70350 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 1.9E-15 T 25-04-2017 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 1.9E-15 T 25-04-2017 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.9E-15 T 25-04-2017 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.9E-15 T 25-04-2017 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 7.4E-26 T 25-04-2017 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 7.4E-26 T 25-04-2017 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 7.4E-26 T 25-04-2017 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 7.4E-26 T 25-04-2017 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 7.4E-26 T 25-04-2017 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 Gene3D G3DSA:3.50.50.60 2 110 2.2E-25 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 SUPERFAMILY SSF51905 148 307 3.51E-31 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 Gene3D G3DSA:3.50.50.60 111 305 8.4E-51 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 296 8.4E-59 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS01565 a873ce9b3c9eacc386bdba67bc5fae07 401 SUPERFAMILY SSF51905 2 192 8.64E-44 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 Pfam PF13240 zinc-ribbon domain 4 23 4.0E-7 T 25-04-2017 IPR026870 Zinc-ribbon domain CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SUPERFAMILY SSF52058 396 553 2.79E-26 T 25-04-2017 IPR032675 Leucine-rich repeat domain, L domain-like CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 Gene3D G3DSA:1.25.40.10 175 238 2.0E-5 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 Gene3D G3DSA:3.80.10.10 385 553 1.3E-28 T 25-04-2017 IPR032675 Leucine-rich repeat domain, L domain-like CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 Gene3D G3DSA:3.80.10.10 567 805 2.7E-47 T 25-04-2017 IPR032675 Leucine-rich repeat domain, L domain-like CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00369 477 498 200.0 T 25-04-2017 IPR003591 Leucine-rich repeat, typical subtype CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00369 499 520 28.0 T 25-04-2017 IPR003591 Leucine-rich repeat, typical subtype CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00369 688 708 12.0 T 25-04-2017 IPR003591 Leucine-rich repeat, typical subtype CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00369 596 619 79.0 T 25-04-2017 IPR003591 Leucine-rich repeat, typical subtype CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00369 709 732 7.5 T 25-04-2017 IPR003591 Leucine-rich repeat, typical subtype CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00369 620 644 56.0 T 25-04-2017 IPR003591 Leucine-rich repeat, typical subtype CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 Pfam PF13855 Leucine rich repeat 434 489 4.7E-9 T 25-04-2017 IPR001611 Leucine-rich repeat GO:0005515 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 Pfam PF13855 Leucine rich repeat 589 633 9.4E-7 T 25-04-2017 IPR001611 Leucine-rich repeat GO:0005515 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 Pfam PF13855 Leucine rich repeat 667 722 3.7E-8 T 25-04-2017 IPR001611 Leucine-rich repeat GO:0005515 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 PRINTS PR00019 Leucine-rich repeat signature 458 471 2.4E-5 T 25-04-2017 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 PRINTS PR00019 Leucine-rich repeat signature 477 490 2.4E-5 T 25-04-2017 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00365 477 498 56.0 T 25-04-2017 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00365 574 595 290.0 T 25-04-2017 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00365 596 616 100.0 T 25-04-2017 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00365 455 476 430.0 T 25-04-2017 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00365 499 526 6.0 T 25-04-2017 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00365 709 730 260.0 T 25-04-2017 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SMART SM00365 620 639 270.0 T 25-04-2017 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SUPERFAMILY SSF48452 169 237 5.22E-5 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS02000 02ce01773fe09edaa8e79e45fd895459 824 SUPERFAMILY SSF52058 568 806 2.55E-43 T 25-04-2017 IPR032675 Leucine-rich repeat domain, L domain-like CLFO_RS15410 38477373689bb523871cf0e01eef7ce2 150 PRINTS PR01759 Capsule biosynthesis protein CapC signature 66 80 2.3E-24 T 25-04-2017 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 CLFO_RS15410 38477373689bb523871cf0e01eef7ce2 150 PRINTS PR01759 Capsule biosynthesis protein CapC signature 2 17 2.3E-24 T 25-04-2017 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 CLFO_RS15410 38477373689bb523871cf0e01eef7ce2 150 PRINTS PR01759 Capsule biosynthesis protein CapC signature 20 37 2.3E-24 T 25-04-2017 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 CLFO_RS15410 38477373689bb523871cf0e01eef7ce2 150 PRINTS PR01759 Capsule biosynthesis protein CapC signature 118 132 2.3E-24 T 25-04-2017 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 CLFO_RS15410 38477373689bb523871cf0e01eef7ce2 150 TIGRFAM TIGR04011 poly_gGlu_PgsC: poly-gamma-glutamate biosynthesis protein PgsC 10 139 5.8E-41 T 25-04-2017 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 CLFO_RS15410 38477373689bb523871cf0e01eef7ce2 150 Pfam PF14102 Capsule biosynthesis CapC 12 129 1.3E-34 T 25-04-2017 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 CLFO_RS06960 69dc5c027c05d66f75dcb3b2307d100d 269 SUPERFAMILY SSF53850 43 266 1.82E-65 T 25-04-2017 CLFO_RS06960 69dc5c027c05d66f75dcb3b2307d100d 269 Gene3D G3DSA:3.40.190.10 230 267 7.2E-24 T 25-04-2017 CLFO_RS06960 69dc5c027c05d66f75dcb3b2307d100d 269 Gene3D G3DSA:3.40.190.10 1 131 7.2E-24 T 25-04-2017 CLFO_RS06960 69dc5c027c05d66f75dcb3b2307d100d 269 PIRSF PIRSF004846 1 269 1.2E-79 T 25-04-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 CLFO_RS06960 69dc5c027c05d66f75dcb3b2307d100d 269 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 49 265 5.2E-65 T 25-04-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 CLFO_RS06960 69dc5c027c05d66f75dcb3b2307d100d 269 Pfam PF13531 Bacterial extracellular solute-binding protein 44 266 3.3E-44 T 25-04-2017 CLFO_RS06960 69dc5c027c05d66f75dcb3b2307d100d 269 Gene3D G3DSA:3.40.190.10 132 229 3.2E-34 T 25-04-2017 CLFO_RS17560 6a250a5b04b8ecb4af54c3eb35eebc4b 679 PIRSF PIRSF001423 73 660 3.3E-179 T 25-04-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS17560 6a250a5b04b8ecb4af54c3eb35eebc4b 679 Gene3D G3DSA:3.40.50.10730 218 440 7.4E-83 T 25-04-2017 CLFO_RS17560 6a250a5b04b8ecb4af54c3eb35eebc4b 679 ProSitePatterns PS01233 Urocanase signature. 538 553 - T 25-04-2017 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS17560 6a250a5b04b8ecb4af54c3eb35eebc4b 679 SUPERFAMILY SSF111326 88 647 4.32E-223 T 25-04-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS17560 6a250a5b04b8ecb4af54c3eb35eebc4b 679 TIGRFAM TIGR01228 hutU: urocanate hydratase 89 641 1.6E-132 T 25-04-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS17560 6a250a5b04b8ecb4af54c3eb35eebc4b 679 Hamap MF_00577 Urocanate hydratase [hutU]. 59 660 42.334 T 25-04-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS17560 6a250a5b04b8ecb4af54c3eb35eebc4b 679 Pfam PF01175 Urocanase 88 640 2.8E-236 T 25-04-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CLFO_RS17560 6a250a5b04b8ecb4af54c3eb35eebc4b 679 Gene3D G3DSA:3.40.1770.10 452 649 5.5E-147 T 25-04-2017 CLFO_RS17560 6a250a5b04b8ecb4af54c3eb35eebc4b 679 Gene3D G3DSA:3.40.1770.10 83 217 5.5E-147 T 25-04-2017 CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 SMART SM00924 24 127 8.7E-34 T 25-04-2017 IPR006668 Magnesium transporter, MgtE intracellular domain CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 TIGRFAM TIGR00400 mgtE: magnesium transporter 5 443 3.3E-155 T 25-04-2017 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 Gene3D G3DSA:1.25.60.10 3 117 2.8E-30 T 25-04-2017 CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 Gene3D G3DSA:3.10.580.10 118 255 1.1E-26 T 25-04-2017 CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 SMART SM00116 198 246 1.3E-6 T 25-04-2017 IPR000644 CBS domain CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 Pfam PF03448 MgtE intracellular N domain 24 125 2.8E-28 T 25-04-2017 IPR006668 Magnesium transporter, MgtE intracellular domain CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 Pfam PF00571 CBS domain 127 183 5.8E-6 T 25-04-2017 IPR000644 CBS domain CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 Pfam PF00571 CBS domain 192 245 2.7E-8 T 25-04-2017 IPR000644 CBS domain CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 Gene3D G3DSA:1.10.357.20 270 443 7.3E-55 T 25-04-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 Pfam PF01769 Divalent cation transporter 313 436 2.8E-30 T 25-04-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 SUPERFAMILY SSF54631 127 265 1.04E-31 T 25-04-2017 CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 SUPERFAMILY SSF161093 270 442 6.67E-49 T 25-04-2017 CLFO_RS04360 eb012f53c1a95635bc380e7f3c01b146 444 SUPERFAMILY SSF158791 2 124 4.71E-29 T 25-04-2017 CLFO_RS10395 36c0a22015fd123b61d56c857ec10acb 980 Pfam PF10145 Phage-related minor tail protein 84 282 1.2E-55 T 25-04-2017 IPR010090 Phage tail tape measure protein CLFO_RS10395 36c0a22015fd123b61d56c857ec10acb 980 SUPERFAMILY SSF58113 475 605 1.57E-5 T 25-04-2017 CLFO_RS10395 36c0a22015fd123b61d56c857ec10acb 980 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 50 371 1.3E-75 T 25-04-2017 IPR010090 Phage tail tape measure protein CLFO_RS12945 2bdb8a951c1c8ee13eeb3baa7392816c 280 Gene3D G3DSA:2.60.120.500 135 280 6.9E-75 T 25-04-2017 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CLFO_RS12945 2bdb8a951c1c8ee13eeb3baa7392816c 280 Pfam PF04962 KduI/IolB family 67 274 1.1E-32 T 25-04-2017 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CLFO_RS12945 2bdb8a951c1c8ee13eeb3baa7392816c 280 PIRSF PIRSF006625 1 280 1.2E-129 T 25-04-2017 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CLFO_RS12945 2bdb8a951c1c8ee13eeb3baa7392816c 280 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 280 53.981 T 25-04-2017 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CLFO_RS12945 2bdb8a951c1c8ee13eeb3baa7392816c 280 Gene3D G3DSA:2.60.120.520 20 134 1.3E-50 T 25-04-2017 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CLFO_RS12945 2bdb8a951c1c8ee13eeb3baa7392816c 280 SUPERFAMILY SSF51182 1 264 5.63E-101 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS19765 c3061075ae9e55723e7f1ad04dcc71ad 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 4.4E-31 T 25-04-2017 IPR020784 Ribosomal protein L11, N-terminal CLFO_RS19765 c3061075ae9e55723e7f1ad04dcc71ad 141 SUPERFAMILY SSF54747 3 72 1.83E-30 T 25-04-2017 IPR020784 Ribosomal protein L11, N-terminal CLFO_RS19765 c3061075ae9e55723e7f1ad04dcc71ad 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 5.9E-64 T 25-04-2017 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19765 c3061075ae9e55723e7f1ad04dcc71ad 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 140 - T 25-04-2017 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19765 c3061075ae9e55723e7f1ad04dcc71ad 141 SMART SM00649 9 140 1.1E-86 T 25-04-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19765 c3061075ae9e55723e7f1ad04dcc71ad 141 Gene3D G3DSA:1.10.10.250 72 140 4.4E-32 T 25-04-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CLFO_RS19765 c3061075ae9e55723e7f1ad04dcc71ad 141 SUPERFAMILY SSF46906 67 140 3.79E-27 T 25-04-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CLFO_RS19765 c3061075ae9e55723e7f1ad04dcc71ad 141 Gene3D G3DSA:3.30.1550.10 2 71 4.4E-39 T 25-04-2017 IPR020784 Ribosomal protein L11, N-terminal CLFO_RS19765 c3061075ae9e55723e7f1ad04dcc71ad 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 1.3E-24 T 25-04-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CLFO_RS19765 c3061075ae9e55723e7f1ad04dcc71ad 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.766 T 25-04-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19765 c3061075ae9e55723e7f1ad04dcc71ad 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-14 T 25-04-2017 CLFO_RS00930 bda518bf1133c0e991696dbdc8f13d54 221 Pfam PF02535 ZIP Zinc transporter 76 217 6.2E-23 T 25-04-2017 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CLFO_RS20590 dc24f9e695409684fa20fb49ebc8fc40 354 Gene3D G3DSA:3.40.50.920 237 346 2.2E-23 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS20590 dc24f9e695409684fa20fb49ebc8fc40 354 SUPERFAMILY SSF52922 237 346 5.18E-23 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS20590 dc24f9e695409684fa20fb49ebc8fc40 354 SUPERFAMILY SSF52518 1 196 1.11E-62 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS20590 dc24f9e695409684fa20fb49ebc8fc40 354 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 246 340 1.9E-21 T 25-04-2017 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CLFO_RS20590 dc24f9e695409684fa20fb49ebc8fc40 354 Gene3D G3DSA:3.40.50.970 1 190 2.7E-75 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS20590 dc24f9e695409684fa20fb49ebc8fc40 354 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 14 192 2.4E-53 T 25-04-2017 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CLFO_RS00845 b974288db6ca3d4672d70320ca614e3e 361 Gene3D G3DSA:3.40.640.10 44 254 1.6E-68 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS00845 b974288db6ca3d4672d70320ca614e3e 361 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 351 1.6E-103 T 25-04-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CLFO_RS00845 b974288db6ca3d4672d70320ca614e3e 361 SUPERFAMILY SSF53383 12 353 2.04E-77 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS00845 b974288db6ca3d4672d70320ca614e3e 361 Gene3D G3DSA:3.90.1150.10 255 353 4.9E-26 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS00845 b974288db6ca3d4672d70320ca614e3e 361 Pfam PF00155 Aminotransferase class I and II 44 346 5.5E-51 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS00845 b974288db6ca3d4672d70320ca614e3e 361 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 353 53.078 T 25-04-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CLFO_RS00845 b974288db6ca3d4672d70320ca614e3e 361 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 212 221 - T 25-04-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CLFO_RS10285 e85ec0b031a515d41bb9f576f44a0b7f 313 SMART SM00382 87 225 1.4E-6 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS10285 e85ec0b031a515d41bb9f576f44a0b7f 313 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 91 221 2.9E-18 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS10285 e85ec0b031a515d41bb9f576f44a0b7f 313 Gene3D G3DSA:3.40.50.300 49 238 1.5E-26 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10285 e85ec0b031a515d41bb9f576f44a0b7f 313 PRINTS PR00819 CbxX/CfqX superfamily signature 269 281 2.3E-59 T 25-04-2017 IPR000641 CbxX/CfqX GO:0005524 CLFO_RS10285 e85ec0b031a515d41bb9f576f44a0b7f 313 PRINTS PR00819 CbxX/CfqX superfamily signature 90 105 2.3E-59 T 25-04-2017 IPR000641 CbxX/CfqX GO:0005524 CLFO_RS10285 e85ec0b031a515d41bb9f576f44a0b7f 313 PRINTS PR00819 CbxX/CfqX superfamily signature 210 229 2.3E-59 T 25-04-2017 IPR000641 CbxX/CfqX GO:0005524 CLFO_RS10285 e85ec0b031a515d41bb9f576f44a0b7f 313 PRINTS PR00819 CbxX/CfqX superfamily signature 128 142 2.3E-59 T 25-04-2017 IPR000641 CbxX/CfqX GO:0005524 CLFO_RS10285 e85ec0b031a515d41bb9f576f44a0b7f 313 PRINTS PR00819 CbxX/CfqX superfamily signature 50 64 2.3E-59 T 25-04-2017 IPR000641 CbxX/CfqX GO:0005524 CLFO_RS10285 e85ec0b031a515d41bb9f576f44a0b7f 313 PRINTS PR00819 CbxX/CfqX superfamily signature 193 210 2.3E-59 T 25-04-2017 IPR000641 CbxX/CfqX GO:0005524 CLFO_RS10285 e85ec0b031a515d41bb9f576f44a0b7f 313 PRINTS PR00819 CbxX/CfqX superfamily signature 172 184 2.3E-59 T 25-04-2017 IPR000641 CbxX/CfqX GO:0005524 CLFO_RS10285 e85ec0b031a515d41bb9f576f44a0b7f 313 PRINTS PR00819 CbxX/CfqX superfamily signature 142 161 2.3E-59 T 25-04-2017 IPR000641 CbxX/CfqX GO:0005524 CLFO_RS10285 e85ec0b031a515d41bb9f576f44a0b7f 313 SUPERFAMILY SSF52540 51 289 7.29E-40 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09485 28c90b6a890dc9fa7cfdc5d7cce6bf36 311 SUPERFAMILY SSF161098 95 309 2.62E-19 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS09485 28c90b6a890dc9fa7cfdc5d7cce6bf36 311 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 309 1.1E-135 T 25-04-2017 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 CLFO_RS09485 28c90b6a890dc9fa7cfdc5d7cce6bf36 311 Gene3D G3DSA:1.10.3720.10 94 305 9.0E-22 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS09485 28c90b6a890dc9fa7cfdc5d7cce6bf36 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 308 1.1E-40 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04880 fb9025c0aa6cfc8739dd64deeb44427f 503 SUPERFAMILY SSF53649 286 496 1.31E-31 T 25-04-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLFO_RS04880 fb9025c0aa6cfc8739dd64deeb44427f 503 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 288 355 7.2E-6 T 25-04-2017 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 CLFO_RS04880 fb9025c0aa6cfc8739dd64deeb44427f 503 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 411 476 3.3E-8 T 25-04-2017 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 CLFO_RS04880 fb9025c0aa6cfc8739dd64deeb44427f 503 Gene3D G3DSA:3.40.720.10 283 475 2.5E-27 T 25-04-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLFO_RS19300 07b360c89362fa641d36d326d4e56d2c 404 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 200 2.6E-78 T 25-04-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS19300 07b360c89362fa641d36d326d4e56d2c 404 SUPERFAMILY SSF142695 206 377 1.1E-74 T 25-04-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CLFO_RS19300 07b360c89362fa641d36d326d4e56d2c 404 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 3 204 41.059 T 25-04-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS19300 07b360c89362fa641d36d326d4e56d2c 404 PIRSF PIRSF001259 3 404 1.2E-187 T 25-04-2017 CLFO_RS19300 07b360c89362fa641d36d326d4e56d2c 404 Pfam PF00925 GTP cyclohydrolase II 209 374 3.2E-77 T 25-04-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CLFO_RS19300 07b360c89362fa641d36d326d4e56d2c 404 Gene3D G3DSA:3.90.870.10 2 212 8.7E-101 T 25-04-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain CLFO_RS19300 07b360c89362fa641d36d326d4e56d2c 404 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 4 396 55.065 T 25-04-2017 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CLFO_RS19300 07b360c89362fa641d36d326d4e56d2c 404 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 205 400 42.816 T 25-04-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CLFO_RS19300 07b360c89362fa641d36d326d4e56d2c 404 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 9 199 2.5E-86 T 25-04-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS19300 07b360c89362fa641d36d326d4e56d2c 404 SUPERFAMILY SSF55821 2 204 2.52E-87 T 25-04-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain CLFO_RS19300 07b360c89362fa641d36d326d4e56d2c 404 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 209 398 6.8E-83 T 25-04-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CLFO_RS12905 92b48dd1ae7e066f4117ddff5d6f9291 299 Gene3D G3DSA:1.10.3720.10 87 291 2.9E-25 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12905 92b48dd1ae7e066f4117ddff5d6f9291 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 295 1.6E-27 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12905 92b48dd1ae7e066f4117ddff5d6f9291 299 SUPERFAMILY SSF161098 89 276 1.28E-22 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04025 d9f72e6169f8ae63617e5fca5402e815 1507 Gene3D G3DSA:2.160.20.60 1239 1499 4.3E-101 T 25-04-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CLFO_RS04025 d9f72e6169f8ae63617e5fca5402e815 1507 Gene3D G3DSA:3.20.20.70 454 806 9.1E-103 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS04025 d9f72e6169f8ae63617e5fca5402e815 1507 Pfam PF01645 Conserved region in glutamate synthase 817 1184 3.2E-150 T 25-04-2017 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CLFO_RS04025 d9f72e6169f8ae63617e5fca5402e815 1507 Pfam PF04898 Glutamate synthase central domain 470 756 1.3E-111 T 25-04-2017 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CLFO_RS04025 d9f72e6169f8ae63617e5fca5402e815 1507 SUPERFAMILY SSF69336 1233 1494 1.31E-90 T 25-04-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CLFO_RS04025 d9f72e6169f8ae63617e5fca5402e815 1507 SUPERFAMILY SSF56235 22 446 4.37E-145 T 25-04-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CLFO_RS04025 d9f72e6169f8ae63617e5fca5402e815 1507 Gene3D G3DSA:3.20.20.70 859 1216 3.2E-169 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS04025 d9f72e6169f8ae63617e5fca5402e815 1507 SUPERFAMILY SSF51395 458 1220 9.77E-248 T 25-04-2017 CLFO_RS04025 d9f72e6169f8ae63617e5fca5402e815 1507 Pfam PF01493 GXGXG motif 1264 1447 4.2E-81 T 25-04-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CLFO_RS04025 d9f72e6169f8ae63617e5fca5402e815 1507 Pfam PF00310 Glutamine amidotransferases class-II 22 442 1.7E-175 T 25-04-2017 IPR017932 Glutamine amidotransferase type 2 domain CLFO_RS04025 d9f72e6169f8ae63617e5fca5402e815 1507 Gene3D G3DSA:3.60.20.10 22 452 3.3E-177 T 25-04-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CLFO_RS15110 93c9a9fc2733c91d7814921a0340a917 580 SMART SM00636 212 555 9.6E-4 T 25-04-2017 IPR011583 Chitinase II GO:0004568|GO:0006032 CLFO_RS15110 93c9a9fc2733c91d7814921a0340a917 580 SUPERFAMILY SSF51445 526 554 9.93E-23 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS15110 93c9a9fc2733c91d7814921a0340a917 580 SUPERFAMILY SSF51445 305 464 9.93E-23 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS15110 93c9a9fc2733c91d7814921a0340a917 580 Gene3D G3DSA:3.20.20.80 304 553 2.1E-21 T 25-04-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLFO_RS15110 93c9a9fc2733c91d7814921a0340a917 580 Pfam PF00395 S-layer homology domain 32 74 1.1E-4 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS15110 93c9a9fc2733c91d7814921a0340a917 580 Pfam PF00395 S-layer homology domain 157 197 5.6E-5 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS15110 93c9a9fc2733c91d7814921a0340a917 580 Pfam PF00395 S-layer homology domain 99 135 1.4E-5 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS15110 93c9a9fc2733c91d7814921a0340a917 580 Pfam PF00704 Glycosyl hydrolases family 18 310 553 8.8E-19 T 25-04-2017 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 CLFO_RS06075 afe726533dda6ed39b7d254ea9cc868c 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 227 2.9E-23 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS06075 afe726533dda6ed39b7d254ea9cc868c 230 SUPERFAMILY SSF46894 136 228 3.97E-26 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS06075 afe726533dda6ed39b7d254ea9cc868c 230 SMART SM00448 6 116 6.1E-43 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS06075 afe726533dda6ed39b7d254ea9cc868c 230 Gene3D G3DSA:1.10.10.10 136 228 2.5E-30 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06075 afe726533dda6ed39b7d254ea9cc868c 230 SUPERFAMILY SSF52172 3 124 2.7E-40 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS06075 afe726533dda6ed39b7d254ea9cc868c 230 Pfam PF00072 Response regulator receiver domain 8 117 3.0E-29 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS06075 afe726533dda6ed39b7d254ea9cc868c 230 SMART SM00862 153 227 3.4E-22 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS06075 afe726533dda6ed39b7d254ea9cc868c 230 Gene3D G3DSA:3.40.50.2300 6 126 3.8E-40 T 25-04-2017 CLFO_RS20345 cb5561b6bfeeb6621e5558a988cc9b14 465 SUPERFAMILY SSF56176 7 220 2.9E-67 T 25-04-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLFO_RS20345 cb5561b6bfeeb6621e5558a988cc9b14 465 Gene3D G3DSA:3.30.465.10 100 220 2.1E-41 T 25-04-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLFO_RS20345 cb5561b6bfeeb6621e5558a988cc9b14 465 Gene3D G3DSA:3.30.43.10 3 99 1.5E-25 T 25-04-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CLFO_RS20345 cb5561b6bfeeb6621e5558a988cc9b14 465 SUPERFAMILY SSF55103 197 463 6.21E-57 T 25-04-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CLFO_RS20345 cb5561b6bfeeb6621e5558a988cc9b14 465 Gene3D G3DSA:1.10.45.10 424 463 9.3E-13 T 25-04-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLFO_RS20345 cb5561b6bfeeb6621e5558a988cc9b14 465 Pfam PF01565 FAD binding domain 45 182 3.0E-40 T 25-04-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CLFO_RS20345 cb5561b6bfeeb6621e5558a988cc9b14 465 Pfam PF02913 FAD linked oxidases, C-terminal domain 220 463 4.3E-64 T 25-04-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CLFO_RS02810 d43a8b9aa1fcfeff0bbc1edbb05941d7 285 SUPERFAMILY SSF52540 4 227 1.9E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02810 d43a8b9aa1fcfeff0bbc1edbb05941d7 285 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS02810 d43a8b9aa1fcfeff0bbc1edbb05941d7 285 SMART SM00382 31 215 1.5E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS02810 d43a8b9aa1fcfeff0bbc1edbb05941d7 285 Gene3D G3DSA:3.40.50.300 3 228 2.9E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02810 d43a8b9aa1fcfeff0bbc1edbb05941d7 285 Pfam PF00005 ABC transporter 25 166 1.9E-28 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS04285 821a9a1ea3126fe5f01bd32d25606065 441 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 1 438 8.4E-189 T 25-04-2017 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 CLFO_RS04285 821a9a1ea3126fe5f01bd32d25606065 441 PIRSF PIRSF011588 1 441 3.4E-181 T 25-04-2017 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 CLFO_RS05585 2da613c4a525b333bc5a8d390482cb9c 647 Pfam PF03063 Prismane/CO dehydrogenase family 46 611 4.0E-166 T 25-04-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05585 2da613c4a525b333bc5a8d390482cb9c 647 Gene3D G3DSA:3.40.50.2030 406 630 3.0E-84 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05585 2da613c4a525b333bc5a8d390482cb9c 647 Gene3D G3DSA:3.40.50.2030 238 405 2.6E-69 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05585 2da613c4a525b333bc5a8d390482cb9c 647 SUPERFAMILY SSF56821 14 631 1.96E-185 T 25-04-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLFO_RS05585 2da613c4a525b333bc5a8d390482cb9c 647 Gene3D G3DSA:1.20.1270.30 65 236 1.2E-73 T 25-04-2017 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS05585 2da613c4a525b333bc5a8d390482cb9c 647 PIRSF PIRSF005023 1 631 2.3E-226 T 25-04-2017 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS05585 2da613c4a525b333bc5a8d390482cb9c 647 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 13 629 5.1E-201 T 25-04-2017 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS07920 67e9dbf532d1840d2f4e39fb495981cd 158 SUPERFAMILY SSF55040 11 155 2.35E-57 T 25-04-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CLFO_RS07920 67e9dbf532d1840d2f4e39fb495981cd 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 35.353 T 25-04-2017 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type Reactome: R-HSA-947581 CLFO_RS07920 67e9dbf532d1840d2f4e39fb495981cd 158 Gene3D G3DSA:3.30.70.640 3 157 1.2E-65 T 25-04-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CLFO_RS07920 67e9dbf532d1840d2f4e39fb495981cd 158 Pfam PF01967 MoaC family 15 150 6.6E-52 T 25-04-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CLFO_RS07920 67e9dbf532d1840d2f4e39fb495981cd 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 6.3E-60 T 25-04-2017 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CLFO_RS07055 c941dbed7cccd214e17256445b657402 428 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 87 301 1.1E-28 T 25-04-2017 IPR004108 Iron hydrogenase, large subunit, C-terminal CLFO_RS07055 c941dbed7cccd214e17256445b657402 428 Gene3D G3DSA:3.40.950.10 114 205 1.7E-15 T 25-04-2017 CLFO_RS07055 c941dbed7cccd214e17256445b657402 428 Gene3D G3DSA:3.40.950.10 257 295 1.7E-15 T 25-04-2017 CLFO_RS07055 c941dbed7cccd214e17256445b657402 428 SUPERFAMILY SSF53920 43 316 4.32E-42 T 25-04-2017 IPR009016 Iron hydrogenase CLFO_RS07055 c941dbed7cccd214e17256445b657402 428 Gene3D G3DSA:3.30.70.20 10 60 6.1E-17 T 25-04-2017 CLFO_RS07055 c941dbed7cccd214e17256445b657402 428 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 15 26 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS07055 c941dbed7cccd214e17256445b657402 428 Pfam PF13237 4Fe-4S dicluster domain 8 55 5.3E-9 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS07055 c941dbed7cccd214e17256445b657402 428 Pfam PF04060 Putative Fe-S cluster 377 408 1.9E-10 T 25-04-2017 IPR007202 4Fe-4S domain GO:0051536 CLFO_RS07055 c941dbed7cccd214e17256445b657402 428 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 44 55 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS07055 c941dbed7cccd214e17256445b657402 428 SUPERFAMILY SSF54862 7 62 5.73E-18 T 25-04-2017 CLFO_RS03950 a733e3a5fc3b7f4e3face31e95bdad2c 154 Pfam PF12663 Protein of unknown function (DUF3788) 15 144 1.0E-31 T 25-04-2017 IPR024265 Protein of unknown function DUF3788 CLFO_RS04405 f44a8f981cc41a00ba058c8ec1756027 576 SMART SM00065 227 362 0.0093 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS04405 f44a8f981cc41a00ba058c8ec1756027 576 SUPERFAMILY SSF55781 230 357 6.17E-9 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS04405 f44a8f981cc41a00ba058c8ec1756027 576 Gene3D G3DSA:3.30.450.40 230 359 1.6E-7 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS04405 f44a8f981cc41a00ba058c8ec1756027 576 SUPERFAMILY SSF55874 420 561 1.96E-16 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04405 f44a8f981cc41a00ba058c8ec1756027 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 561 3.9E-9 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04405 f44a8f981cc41a00ba058c8ec1756027 576 Gene3D G3DSA:3.30.565.10 415 566 9.0E-19 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04405 f44a8f981cc41a00ba058c8ec1756027 576 SMART SM00387 459 564 2.2E-5 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04405 f44a8f981cc41a00ba058c8ec1756027 576 Pfam PF07694 5TMR of 5TMR-LYT 30 196 7.6E-42 T 25-04-2017 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CLFO_RS04405 f44a8f981cc41a00ba058c8ec1756027 576 Pfam PF06580 Histidine kinase 367 445 2.3E-24 T 25-04-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLFO_RS16600 b600cf9698db5f7171f79c77e0c46714 455 TIGRFAM TIGR00835 agcS: amino acid carrier protein 15 441 1.2E-147 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS16600 b600cf9698db5f7171f79c77e0c46714 455 PRINTS PR00175 Sodium/alanine symporter signature 212 231 1.1E-56 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS16600 b600cf9698db5f7171f79c77e0c46714 455 PRINTS PR00175 Sodium/alanine symporter signature 307 325 1.1E-56 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS16600 b600cf9698db5f7171f79c77e0c46714 455 PRINTS PR00175 Sodium/alanine symporter signature 410 430 1.1E-56 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS16600 b600cf9698db5f7171f79c77e0c46714 455 PRINTS PR00175 Sodium/alanine symporter signature 94 116 1.1E-56 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS16600 b600cf9698db5f7171f79c77e0c46714 455 PRINTS PR00175 Sodium/alanine symporter signature 184 202 1.1E-56 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS16600 b600cf9698db5f7171f79c77e0c46714 455 PRINTS PR00175 Sodium/alanine symporter signature 351 373 1.1E-56 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS16600 b600cf9698db5f7171f79c77e0c46714 455 Pfam PF01235 Sodium:alanine symporter family 56 449 1.4E-142 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS11725 2a273ed298d7f422d6e8c56d5ef49895 365 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 142 5.6E-41 T 25-04-2017 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLFO_RS11725 2a273ed298d7f422d6e8c56d5ef49895 365 Gene3D G3DSA:3.40.50.2000 1 187 6.2E-66 T 25-04-2017 CLFO_RS11725 2a273ed298d7f422d6e8c56d5ef49895 365 SUPERFAMILY SSF53756 1 362 5.03E-104 T 25-04-2017 CLFO_RS11725 2a273ed298d7f422d6e8c56d5ef49895 365 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 362 32.874 T 25-04-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLFO_RS11725 2a273ed298d7f422d6e8c56d5ef49895 365 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 188 352 9.2E-37 T 25-04-2017 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 CLFO_RS11725 2a273ed298d7f422d6e8c56d5ef49895 365 Gene3D G3DSA:3.40.50.2000 188 332 3.0E-8 T 25-04-2017 CLFO_RS11725 2a273ed298d7f422d6e8c56d5ef49895 365 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 358 4.2E-97 T 25-04-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLFO_RS00240 d6e285d96142d8a89827f86d7fc97a1e 71 PRINTS PR00944 Copper ion binding protein signature 40 52 4.7E-6 T 25-04-2017 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CLFO_RS00240 d6e285d96142d8a89827f86d7fc97a1e 71 PRINTS PR00944 Copper ion binding protein signature 52 65 4.7E-6 T 25-04-2017 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CLFO_RS00240 d6e285d96142d8a89827f86d7fc97a1e 71 PRINTS PR00944 Copper ion binding protein signature 14 27 4.7E-6 T 25-04-2017 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CLFO_RS00240 d6e285d96142d8a89827f86d7fc97a1e 71 PRINTS PR00944 Copper ion binding protein signature 2 14 4.7E-6 T 25-04-2017 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CLFO_RS00240 d6e285d96142d8a89827f86d7fc97a1e 71 Pfam PF00403 Heavy-metal-associated domain 6 64 2.3E-14 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS00240 d6e285d96142d8a89827f86d7fc97a1e 71 SUPERFAMILY SSF55008 1 68 1.57E-18 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS00240 d6e285d96142d8a89827f86d7fc97a1e 71 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 25-04-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CLFO_RS00240 d6e285d96142d8a89827f86d7fc97a1e 71 Gene3D G3DSA:3.30.70.100 1 66 7.0E-21 T 25-04-2017 CLFO_RS20325 f2971b54098e39e9c1770f27b2438d55 397 Pfam PF04055 Radical SAM superfamily 60 192 9.8E-12 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS20325 f2971b54098e39e9c1770f27b2438d55 397 Pfam PF13186 Iron-sulfur cluster-binding domain 284 361 2.9E-13 T 25-04-2017 IPR023885 4Fe4S-binding SPASM domain CLFO_RS20325 f2971b54098e39e9c1770f27b2438d55 397 Gene3D G3DSA:3.20.20.70 55 368 8.8E-55 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS20325 f2971b54098e39e9c1770f27b2438d55 397 SUPERFAMILY SSF102114 56 367 8.63E-48 T 25-04-2017 CLFO_RS20325 f2971b54098e39e9c1770f27b2438d55 397 TIGRFAM TIGR04317 W_rSAM_matur: tungsten cofactor oxidoreducase radical SAM maturase 54 397 1.7E-129 T 25-04-2017 IPR027604 Tungsten cofactor oxidoreducase radical SAM maturase CLFO_RS20325 f2971b54098e39e9c1770f27b2438d55 397 SMART SM00729 56 262 0.0011 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS03890 119912d0ae21c5c12f76edf811a83ca0 382 SMART SM00922 125 230 2.6E-22 T 25-04-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CLFO_RS03890 119912d0ae21c5c12f76edf811a83ca0 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 16 107 4.7E-26 T 25-04-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CLFO_RS03890 119912d0ae21c5c12f76edf811a83ca0 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 25-04-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CLFO_RS03890 119912d0ae21c5c12f76edf811a83ca0 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 25-04-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CLFO_RS03890 119912d0ae21c5c12f76edf811a83ca0 382 SUPERFAMILY SSF54826 1 112 5.3E-32 T 25-04-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS03890 119912d0ae21c5c12f76edf811a83ca0 382 Pfam PF13378 Enolase C-terminal domain-like 129 355 2.8E-64 T 25-04-2017 IPR029065 Enolase C-terminal domain-like CLFO_RS03890 119912d0ae21c5c12f76edf811a83ca0 382 Gene3D G3DSA:3.20.20.120 117 343 1.5E-89 T 25-04-2017 IPR029065 Enolase C-terminal domain-like CLFO_RS03890 119912d0ae21c5c12f76edf811a83ca0 382 Gene3D G3DSA:3.30.390.10 1 116 1.7E-55 T 25-04-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS03890 119912d0ae21c5c12f76edf811a83ca0 382 SUPERFAMILY SSF51604 95 360 2.1E-80 T 25-04-2017 IPR029065 Enolase C-terminal domain-like CLFO_RS01590 d7b2055fe5da0c7b77ee80e74c0519c6 514 Gene3D G3DSA:3.30.420.40 9 129 1.7E-27 T 25-04-2017 CLFO_RS01590 d7b2055fe5da0c7b77ee80e74c0519c6 514 Pfam PF02541 Ppx/GppA phosphatase family 40 307 4.0E-20 T 25-04-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CLFO_RS01590 d7b2055fe5da0c7b77ee80e74c0519c6 514 Pfam PF01966 HD domain 339 456 4.2E-8 T 25-04-2017 IPR006674 HD domain CLFO_RS01590 d7b2055fe5da0c7b77ee80e74c0519c6 514 SUPERFAMILY SSF53067 141 310 6.38E-12 T 25-04-2017 CLFO_RS01590 d7b2055fe5da0c7b77ee80e74c0519c6 514 SUPERFAMILY SSF109604 326 510 1.96E-42 T 25-04-2017 CLFO_RS01590 d7b2055fe5da0c7b77ee80e74c0519c6 514 Gene3D G3DSA:1.10.3210.10 324 457 3.3E-8 T 25-04-2017 IPR006674 HD domain CLFO_RS01590 d7b2055fe5da0c7b77ee80e74c0519c6 514 SUPERFAMILY SSF53067 10 129 6.22E-22 T 25-04-2017 CLFO_RS01590 d7b2055fe5da0c7b77ee80e74c0519c6 514 Gene3D G3DSA:3.30.420.150 142 309 1.2E-7 T 25-04-2017 CLFO_RS19500 16695e297f2f280b89172a841fa3c1c1 285 Gene3D G3DSA:3.20.20.370 62 284 1.0E-81 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS19500 16695e297f2f280b89172a841fa3c1c1 285 SUPERFAMILY SSF88713 63 284 5.06E-67 T 25-04-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLFO_RS19500 16695e297f2f280b89172a841fa3c1c1 285 Pfam PF04748 Divergent polysaccharide deacetylase 67 283 1.1E-74 T 25-04-2017 IPR006837 Divergent polysaccharide deacetylase CLFO_RS13820 b99a4f66e72753c2c57ed1b4809c52e1 185 Gene3D G3DSA:3.40.109.10 1 181 3.7E-46 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS13820 b99a4f66e72753c2c57ed1b4809c52e1 185 Pfam PF00881 Nitroreductase family 7 167 1.6E-29 T 25-04-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLFO_RS13820 b99a4f66e72753c2c57ed1b4809c52e1 185 SUPERFAMILY SSF55469 1 178 2.36E-42 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS05885 8e1a33e38aa860fa309cfb79828e2d8e 243 Pfam PF08241 Methyltransferase domain 47 138 1.7E-15 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS05885 8e1a33e38aa860fa309cfb79828e2d8e 243 SUPERFAMILY SSF53335 21 208 3.41E-32 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS05885 8e1a33e38aa860fa309cfb79828e2d8e 243 Gene3D G3DSA:3.40.50.150 30 206 7.6E-33 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS19390 75207b68ce8aeb6fe537593ec28fbba8 310 Gene3D G3DSA:3.40.50.10740 1 162 2.1E-55 T 25-04-2017 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain CLFO_RS19390 75207b68ce8aeb6fe537593ec28fbba8 310 SUPERFAMILY SSF52317 1 157 4.12E-50 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS19390 75207b68ce8aeb6fe537593ec28fbba8 310 SUPERFAMILY SSF141986 160 299 1.7E-44 T 25-04-2017 IPR027461 LD-carboxypeptidase A, C-terminal domain CLFO_RS19390 75207b68ce8aeb6fe537593ec28fbba8 310 Gene3D G3DSA:3.50.30.60 168 301 5.5E-47 T 25-04-2017 IPR027461 LD-carboxypeptidase A, C-terminal domain CLFO_RS19390 75207b68ce8aeb6fe537593ec28fbba8 310 Pfam PF02016 LD-carboxypeptidase 13 292 2.0E-87 T 25-04-2017 IPR003507 Peptidase family S66 CLFO_RS19390 75207b68ce8aeb6fe537593ec28fbba8 310 PIRSF PIRSF028757 1 308 3.1E-94 T 25-04-2017 IPR003507 Peptidase family S66 CLFO_RS06660 46f0801bc441a043a208db630160af03 125 Gene3D G3DSA:3.40.1140.10 6 102 7.2E-16 T 25-04-2017 CLFO_RS06660 46f0801bc441a043a208db630160af03 125 Pfam PF13558 Putative exonuclease SbcCD, C subunit 5 60 6.7E-16 T 25-04-2017 CLFO_RS06660 46f0801bc441a043a208db630160af03 125 SUPERFAMILY SSF52540 5 69 4.7E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14950 d5681bd1095607604b385b75944540f1 340 SUPERFAMILY SSF53822 59 303 8.78E-13 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS14950 d5681bd1095607604b385b75944540f1 340 Pfam PF04392 ABC transporter substrate binding protein 47 333 5.7E-71 T 25-04-2017 IPR007487 ABC transporter, substrate-binding protein CLFO_RS14950 d5681bd1095607604b385b75944540f1 340 Gene3D G3DSA:3.40.50.2300 44 174 3.2E-41 T 25-04-2017 CLFO_RS14950 d5681bd1095607604b385b75944540f1 340 Gene3D G3DSA:3.40.50.2300 175 305 5.3E-43 T 25-04-2017 CLFO_RS05925 763783b0ea1ebafc70a3eeb972f6a3fb 303 Pfam PF01515 Phosphate acetyl/butaryl transferase 7 72 6.5E-9 T 25-04-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLFO_RS05925 763783b0ea1ebafc70a3eeb972f6a3fb 303 Pfam PF01515 Phosphate acetyl/butaryl transferase 78 294 1.4E-42 T 25-04-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLFO_RS05925 763783b0ea1ebafc70a3eeb972f6a3fb 303 SUPERFAMILY SSF53659 5 299 3.82E-61 T 25-04-2017 CLFO_RS05925 763783b0ea1ebafc70a3eeb972f6a3fb 303 PIRSF PIRSF000428 1 303 1.3E-84 T 25-04-2017 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLFO_RS05925 763783b0ea1ebafc70a3eeb972f6a3fb 303 Gene3D G3DSA:3.40.50.10750 112 272 2.0E-43 T 25-04-2017 CLFO_RS15420 91cc4e213e0767561554cd79e4a2657c 112 Pfam PF01609 Transposase DDE domain 10 111 2.6E-6 T 25-04-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS15140 4b8565b0fc4a3fda9acb42340fd21457 546 Gene3D G3DSA:3.40.50.300 286 499 2.6E-46 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15140 4b8565b0fc4a3fda9acb42340fd21457 546 Gene3D G3DSA:3.40.50.300 3 76 9.4E-15 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15140 4b8565b0fc4a3fda9acb42340fd21457 546 SMART SM00382 28 171 5.0E-8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15140 4b8565b0fc4a3fda9acb42340fd21457 546 SMART SM00382 313 474 1.2E-8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15140 4b8565b0fc4a3fda9acb42340fd21457 546 Gene3D G3DSA:3.40.50.300 97 221 6.2E-22 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15140 4b8565b0fc4a3fda9acb42340fd21457 546 SUPERFAMILY SSF52540 274 492 2.06E-43 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15140 4b8565b0fc4a3fda9acb42340fd21457 546 Pfam PF12848 ABC transporter 165 271 8.6E-9 T 25-04-2017 IPR032781 ABC-transporter extension domain CLFO_RS15140 4b8565b0fc4a3fda9acb42340fd21457 546 ProSitePatterns PS00211 ABC transporters family signature. 98 112 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15140 4b8565b0fc4a3fda9acb42340fd21457 546 SUPERFAMILY SSF52540 8 215 3.76E-35 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15140 4b8565b0fc4a3fda9acb42340fd21457 546 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15140 4b8565b0fc4a3fda9acb42340fd21457 546 Pfam PF00005 ABC transporter 23 69 4.6E-8 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15140 4b8565b0fc4a3fda9acb42340fd21457 546 Pfam PF00005 ABC transporter 304 429 2.0E-20 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS17135 1d5a71b534c48f25e1f367a127387a5b 710 Pfam PF10593 Z1 domain 290 506 4.3E-31 T 25-04-2017 IPR018310 Putative endonuclease, Z1 domain CLFO_RS17135 1d5a71b534c48f25e1f367a127387a5b 710 Gene3D G3DSA:3.40.50.300 12 205 2.0E-6 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09470 f3611a9c5e19ba8d4d31f5a41889fd01 355 SUPERFAMILY SSF52172 7 164 4.13E-30 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS09470 f3611a9c5e19ba8d4d31f5a41889fd01 355 Pfam PF00072 Response regulator receiver domain 10 114 7.7E-20 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS09470 f3611a9c5e19ba8d4d31f5a41889fd01 355 SMART SM00448 8 121 5.7E-17 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS09470 f3611a9c5e19ba8d4d31f5a41889fd01 355 Gene3D G3DSA:3.40.50.2300 9 143 3.3E-31 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 Gene3D G3DSA:3.30.70.1430 41 139 4.4E-26 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 SUPERFAMILY SSF82693 41 133 4.19E-24 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 Gene3D G3DSA:1.10.3850.10 806 1020 1.0E-67 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1019 6.3E-271 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 Gene3D G3DSA:3.30.70.1430 565 659 1.3E-12 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 Gene3D G3DSA:1.20.1640.10 296 495 3.4E-55 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 SUPERFAMILY SSF82693 563 659 5.06E-14 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 SUPERFAMILY SSF82866 800 1021 9.42E-54 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 SUPERFAMILY SSF82866 289 487 2.49E-41 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 SUPERFAMILY SSF82693 135 180 2.49E-15 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 SUPERFAMILY SSF82693 266 319 2.49E-15 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 Gene3D G3DSA:3.30.2090.10 182 263 1.9E-14 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 Gene3D G3DSA:3.30.2090.10 715 803 2.0E-13 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 Gene3D G3DSA:3.30.70.1320 268 295 1.5E-12 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 Gene3D G3DSA:3.30.70.1320 148 177 1.5E-12 T 25-04-2017 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 8.2E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 8.2E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 8.2E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 8.2E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 8.2E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 8.2E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 8.2E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.2E-52 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 SUPERFAMILY SSF82714 715 800 3.79E-14 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS15600 feff8e7e234c8532c99e1a327a9a4288 1040 SUPERFAMILY SSF82714 182 263 5.1E-14 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS17230 e601e4a5343a1d866f41e56f4aa370af 376 Pfam PF14657 AP2-like DNA-binding integrase domain 12 52 1.0E-5 T 25-04-2017 IPR028259 AP2-like integrase, N-terminal domain CLFO_RS17230 e601e4a5343a1d866f41e56f4aa370af 376 Gene3D G3DSA:1.10.443.10 177 367 2.5E-40 T 25-04-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS17230 e601e4a5343a1d866f41e56f4aa370af 376 Pfam PF00589 Phage integrase family 194 360 1.0E-25 T 25-04-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS17230 e601e4a5343a1d866f41e56f4aa370af 376 SUPERFAMILY SSF56349 63 366 3.83E-58 T 25-04-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLFO_RS17230 e601e4a5343a1d866f41e56f4aa370af 376 Gene3D G3DSA:1.10.150.130 63 163 3.1E-13 T 25-04-2017 IPR023109 Integrase/recombinase, N-terminal CLFO_RS17230 e601e4a5343a1d866f41e56f4aa370af 376 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 64 120 2.9E-14 T 25-04-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLFO_RS20015 679e42e489f24b0cd65dce1ac86512d9 647 Pfam PF01434 Peptidase family M41 395 602 6.1E-80 T 25-04-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CLFO_RS20015 679e42e489f24b0cd65dce1ac86512d9 647 SUPERFAMILY SSF52540 159 404 2.95E-73 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20015 679e42e489f24b0cd65dce1ac86512d9 647 Gene3D G3DSA:3.40.50.300 159 342 5.5E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20015 679e42e489f24b0cd65dce1ac86512d9 647 Gene3D G3DSA:1.10.8.60 343 409 3.4E-26 T 25-04-2017 CLFO_RS20015 679e42e489f24b0cd65dce1ac86512d9 647 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 332 1.1E-43 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS20015 679e42e489f24b0cd65dce1ac86512d9 647 SUPERFAMILY SSF140990 415 610 1.44E-72 T 25-04-2017 CLFO_RS20015 679e42e489f24b0cd65dce1ac86512d9 647 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 621 37.453 T 25-04-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLFO_RS20015 679e42e489f24b0cd65dce1ac86512d9 647 Pfam PF06480 FtsH Extracellular 10 97 8.2E-10 T 25-04-2017 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 CLFO_RS20015 679e42e489f24b0cd65dce1ac86512d9 647 ProSitePatterns PS00674 AAA-protein family signature. 304 322 - T 25-04-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CLFO_RS20015 679e42e489f24b0cd65dce1ac86512d9 647 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 115 604 2.1E-235 T 25-04-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLFO_RS20015 679e42e489f24b0cd65dce1ac86512d9 647 SMART SM00382 197 336 1.2E-24 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS02620 d5eb9ca1ddd0ae99d33d2b0faec4a66d 285 PIRSF PIRSF000388 1 270 4.6E-109 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS02620 d5eb9ca1ddd0ae99d33d2b0faec4a66d 285 Gene3D G3DSA:3.20.20.60 2 267 1.3E-109 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS02620 d5eb9ca1ddd0ae99d33d2b0faec4a66d 285 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 7 263 1.8E-94 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS02620 d5eb9ca1ddd0ae99d33d2b0faec4a66d 285 SUPERFAMILY SSF51621 4 262 2.83E-98 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS02620 d5eb9ca1ddd0ae99d33d2b0faec4a66d 285 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 267 39.999 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS02620 d5eb9ca1ddd0ae99d33d2b0faec4a66d 285 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 260 3.0E-107 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS18610 d5eb9ca1ddd0ae99d33d2b0faec4a66d 285 PIRSF PIRSF000388 1 270 4.6E-109 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS18610 d5eb9ca1ddd0ae99d33d2b0faec4a66d 285 Gene3D G3DSA:3.20.20.60 2 267 1.3E-109 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS18610 d5eb9ca1ddd0ae99d33d2b0faec4a66d 285 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 7 263 1.8E-94 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS18610 d5eb9ca1ddd0ae99d33d2b0faec4a66d 285 SUPERFAMILY SSF51621 4 262 2.83E-98 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS18610 d5eb9ca1ddd0ae99d33d2b0faec4a66d 285 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 267 39.999 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS18610 d5eb9ca1ddd0ae99d33d2b0faec4a66d 285 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 260 3.0E-107 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS05080 a08dbe6b9f5f60baa86693aae73e4926 377 Pfam PF10442 FIST C domain 233 361 1.5E-9 T 25-04-2017 IPR019494 FIST, C-domain CLFO_RS05080 a08dbe6b9f5f60baa86693aae73e4926 377 SMART SM01204 233 363 3.4E-10 T 25-04-2017 IPR019494 FIST, C-domain CLFO_RS05080 a08dbe6b9f5f60baa86693aae73e4926 377 Pfam PF08495 FIST N domain 32 231 3.7E-32 T 25-04-2017 IPR013702 FIST domain, N-terminal CLFO_RS05080 a08dbe6b9f5f60baa86693aae73e4926 377 SMART SM00897 29 232 9.8E-46 T 25-04-2017 IPR013702 FIST domain, N-terminal CLFO_RS02200 bfccdaf36889b84f073bb17e7bb4675d 449 Gene3D G3DSA:1.10.1060.10 238 332 6.5E-11 T 25-04-2017 CLFO_RS02200 bfccdaf36889b84f073bb17e7bb4675d 449 SUPERFAMILY SSF142984 160 231 6.67E-11 T 25-04-2017 CLFO_RS02200 bfccdaf36889b84f073bb17e7bb4675d 449 Gene3D G3DSA:2.40.50.100 390 434 2.2E-5 T 25-04-2017 CLFO_RS02200 bfccdaf36889b84f073bb17e7bb4675d 449 Pfam PF13375 RnfC Barrel sandwich hybrid domain 379 439 9.0E-14 T 25-04-2017 IPR026902 RnfC Barrel sandwich hybrid domain CLFO_RS02200 bfccdaf36889b84f073bb17e7bb4675d 449 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 8 150 1.9E-45 T 25-04-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS02200 bfccdaf36889b84f073bb17e7bb4675d 449 Pfam PF13534 4Fe-4S dicluster domain 254 314 7.0E-10 T 25-04-2017 CLFO_RS02200 bfccdaf36889b84f073bb17e7bb4675d 449 SUPERFAMILY SSF142019 2 166 9.81E-42 T 25-04-2017 CLFO_RS02200 bfccdaf36889b84f073bb17e7bb4675d 449 PIRSF PIRSF036408 1 443 3.4E-188 T 25-04-2017 IPR017054 Propanediol utilization protein, PduS, predicted CLFO_RS02200 bfccdaf36889b84f073bb17e7bb4675d 449 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 255 266 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS02200 bfccdaf36889b84f073bb17e7bb4675d 449 Pfam PF10531 SLBB domain 162 207 2.2E-12 T 25-04-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS02200 bfccdaf36889b84f073bb17e7bb4675d 449 SUPERFAMILY SSF51230 395 437 5.89E-6 T 25-04-2017 IPR011053 Single hybrid motif CLFO_RS02200 bfccdaf36889b84f073bb17e7bb4675d 449 SUPERFAMILY SSF46548 250 331 6.28E-12 T 25-04-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 SUPERFAMILY SSF46548 2 153 6.8E-36 T 25-04-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 Gene3D G3DSA:3.50.50.60 231 392 4.7E-36 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 7.8E-20 T 25-04-2017 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 PRINTS PR00419 Adrenodoxin reductase family signature 210 220 7.8E-20 T 25-04-2017 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 PRINTS PR00419 Adrenodoxin reductase family signature 284 298 7.8E-20 T 25-04-2017 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 7.8E-20 T 25-04-2017 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 Gene3D G3DSA:1.10.1060.10 4 145 1.4E-40 T 25-04-2017 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 4 475 1.4E-198 T 25-04-2017 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 SUPERFAMILY SSF51971 142 403 2.35E-61 T 25-04-2017 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 364 458 4.9E-9 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 318 1.4E-12 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 SUPERFAMILY SSF51971 361 471 4.24E-9 T 25-04-2017 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 Gene3D G3DSA:3.50.50.60 146 230 5.0E-40 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 Gene3D G3DSA:3.50.50.60 393 473 5.0E-40 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS06870 9bf8b75c5641de56ee3e8e514065a24c 477 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 131 2.3E-21 T 25-04-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CLFO_RS03590 f1d58749a7e46a211564719321d8a560 123 Pfam PF03780 Asp23 family, cell envelope-related function 15 120 1.5E-30 T 25-04-2017 IPR005531 Alkaline shock protein Asp23 CLFO_RS07000 0734a72ee43e145c929dd0eff977ddd5 454 Gene3D G3DSA:3.40.50.1980 316 448 6.9E-46 T 25-04-2017 CLFO_RS07000 0734a72ee43e145c929dd0eff977ddd5 454 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 10 449 5.6E-194 T 25-04-2017 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0006461|GO:0009399 CLFO_RS07000 0734a72ee43e145c929dd0eff977ddd5 454 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 129 143 - T 25-04-2017 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CLFO_RS07000 0734a72ee43e145c929dd0eff977ddd5 454 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 63 70 - T 25-04-2017 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CLFO_RS07000 0734a72ee43e145c929dd0eff977ddd5 454 Gene3D G3DSA:3.40.50.1980 185 289 4.0E-36 T 25-04-2017 CLFO_RS07000 0734a72ee43e145c929dd0eff977ddd5 454 Gene3D G3DSA:3.40.50.1980 45 180 4.9E-51 T 25-04-2017 CLFO_RS07000 0734a72ee43e145c929dd0eff977ddd5 454 SUPERFAMILY SSF53807 8 446 1.5E-137 T 25-04-2017 CLFO_RS07000 0734a72ee43e145c929dd0eff977ddd5 454 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 45 438 2.1E-114 T 25-04-2017 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CLFO_RS04460 141280c680a549c3b330606e8a2ef5cb 72 Pfam PF04023 FeoA domain 1 71 1.1E-10 T 25-04-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLFO_RS04460 141280c680a549c3b330606e8a2ef5cb 72 SUPERFAMILY SSF50037 3 70 3.36E-8 T 25-04-2017 IPR008988 Transcriptional repressor, C-terminal CLFO_RS04460 141280c680a549c3b330606e8a2ef5cb 72 SMART SM00899 1 71 3.1E-8 T 25-04-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLFO_RS00140 4d9b04ed44775e56336652f200802531 144 SUPERFAMILY SSF53927 1 142 9.2E-54 T 25-04-2017 IPR016193 Cytidine deaminase-like GO:0003824 CLFO_RS00140 4d9b04ed44775e56336652f200802531 144 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 142 46.898 T 25-04-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CLFO_RS00140 4d9b04ed44775e56336652f200802531 144 Pfam PF14437 MafB19-like deaminase 1 142 4.5E-44 T 25-04-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CLFO_RS00140 4d9b04ed44775e56336652f200802531 144 Gene3D G3DSA:3.40.140.10 1 140 5.2E-59 T 25-04-2017 CLFO_RS00140 4d9b04ed44775e56336652f200802531 144 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 83 - T 25-04-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLFO_RS10015 56f047deda0585fef777e6bbc74335b1 236 Gene3D G3DSA:3.30.240.20 79 153 1.0E-21 T 25-04-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLFO_RS10015 56f047deda0585fef777e6bbc74335b1 236 Pfam PF04239 Protein of unknown function (DUF421) 90 203 5.4E-31 T 25-04-2017 IPR007353 Protein of unknown function DUF421 CLFO_RS10015 56f047deda0585fef777e6bbc74335b1 236 Gene3D G3DSA:3.30.240.20 167 226 7.2E-15 T 25-04-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 Gene3D G3DSA:3.90.550.10 7 108 1.1E-4 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 SUPERFAMILY SSF48452 188 344 3.54E-20 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 SUPERFAMILY SSF48452 482 540 3.54E-20 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 SUPERFAMILY SSF53448 6 144 2.53E-9 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 SMART SM00028 308 341 10.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 SMART SM00028 263 296 0.83 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 SMART SM00028 509 542 0.22 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 SMART SM00028 581 614 70.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 SMART SM00028 229 262 340.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 Pfam PF13181 Tetratricopeptide repeat 515 540 0.022 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 SUPERFAMILY SSF48452 581 642 4.75E-9 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 SUPERFAMILY SSF48452 508 544 4.75E-9 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 Gene3D G3DSA:1.25.40.10 512 540 9.0E-26 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 Gene3D G3DSA:1.25.40.10 579 641 9.0E-26 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS15770 f725d24845ee44616c7fe7bf8ba18e21 697 Gene3D G3DSA:1.25.40.10 195 344 9.0E-26 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS01345 32a8b7717e24ddfa77e0a751e63ce34f 96 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 88 6.3E-12 T 25-04-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CLFO_RS01345 32a8b7717e24ddfa77e0a751e63ce34f 96 SUPERFAMILY SSF101498 1 89 1.96E-14 T 25-04-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CLFO_RS01345 32a8b7717e24ddfa77e0a751e63ce34f 96 Pfam PF04316 Anti-sigma-28 factor, FlgM 34 88 2.5E-16 T 25-04-2017 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 SUPERFAMILY SSF55874 206 375 2.75E-44 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 264 373 2.3E-25 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 372 9.1E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 353 9.1E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 314 9.1E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 328 9.1E-18 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 Pfam PF00512 His Kinase A (phospho-acceptor) domain 149 217 2.8E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 SUPERFAMILY SSF47384 134 217 1.96E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 SMART SM00388 148 217 3.2E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 Gene3D G3DSA:3.30.565.10 203 374 8.9E-45 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 SMART SM00387 263 375 2.0E-34 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 SMART SM00304 82 134 1.6E-4 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 Pfam PF00672 HAMP domain 65 130 3.7E-10 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS03005 33a4739281a4c76fb354fbe6b4d212b9 408 Gene3D G3DSA:1.10.287.130 143 202 3.8E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS01245 9fdbead598ebc24cfaae27b73ef6a0e8 227 Pfam PF01391 Collagen triple helix repeat (20 copies) 31 89 5.3E-8 T 25-04-2017 IPR008160 Collagen triple helix repeat CLFO_RS01245 9fdbead598ebc24cfaae27b73ef6a0e8 227 Gene3D G3DSA:2.60.120.40 95 226 8.1E-19 T 25-04-2017 IPR008983 Tumour necrosis factor-like domain GO:0005515 CLFO_RS15345 eea264d4d0cb1a42ce80dbd1525de899 453 Pfam PF01554 MatE 21 181 1.1E-34 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS15345 eea264d4d0cb1a42ce80dbd1525de899 453 Pfam PF01554 MatE 255 409 2.7E-19 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS15345 eea264d4d0cb1a42ce80dbd1525de899 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 415 1.0E-78 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS15345 eea264d4d0cb1a42ce80dbd1525de899 453 PIRSF PIRSF006603 1 453 2.4E-79 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS09295 1faed59182dd32452ccb195f4cbfa878 88 Pfam PF06949 Protein of unknown function (DUF1292) 13 83 1.2E-16 T 25-04-2017 IPR009711 Uncharacterised protein family UPF0473 CLFO_RS09295 1faed59182dd32452ccb195f4cbfa878 88 Hamap MF_01448 UPF0473 protein . 4 84 14.39 T 25-04-2017 IPR009711 Uncharacterised protein family UPF0473 CLFO_RS03785 e2d82b0755fb3f006356de2afd7066cb 430 Pfam PF13416 Bacterial extracellular solute-binding protein 54 356 4.5E-30 T 25-04-2017 CLFO_RS03785 e2d82b0755fb3f006356de2afd7066cb 430 Gene3D G3DSA:3.40.190.10 150 324 5.4E-17 T 25-04-2017 CLFO_RS03785 e2d82b0755fb3f006356de2afd7066cb 430 Gene3D G3DSA:3.40.190.10 1 143 7.9E-25 T 25-04-2017 CLFO_RS03785 e2d82b0755fb3f006356de2afd7066cb 430 Gene3D G3DSA:3.40.190.10 325 355 7.9E-25 T 25-04-2017 CLFO_RS03785 e2d82b0755fb3f006356de2afd7066cb 430 SUPERFAMILY SSF53850 20 423 2.12E-56 T 25-04-2017 CLFO_RS11500 cfabd107d6e14587e8d2a7a9af6b87c4 148 Hamap MF_01197 Cell division protein SepF [sepF]. 3 138 19.541 T 25-04-2017 IPR023052 Cell division protein SepF GO:0090529 CLFO_RS11500 cfabd107d6e14587e8d2a7a9af6b87c4 148 Pfam PF04472 Protein of unknown function (DUF552) 59 130 1.7E-27 T 25-04-2017 IPR007561 Cell division protein SepF/SepF-related GO:0090529 CLFO_RS12240 1d5ca4a05cc2c74aa22bfae8d3e19540 233 PIRSF PIRSF018637 3 231 2.7E-73 T 25-04-2017 IPR006901 tRNA methyltransferase TrmK GO:0016429 CLFO_RS12240 1d5ca4a05cc2c74aa22bfae8d3e19540 233 Pfam PF12847 Methyltransferase domain 5 155 1.5E-56 T 25-04-2017 CLFO_RS12240 1d5ca4a05cc2c74aa22bfae8d3e19540 233 SUPERFAMILY SSF53335 14 99 1.41E-11 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS12240 1d5ca4a05cc2c74aa22bfae8d3e19540 233 Gene3D G3DSA:3.40.50.150 18 143 5.6E-14 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 Pfam PF10410 DnaB-helicase binding domain of primase 365 420 5.7E-9 T 25-04-2017 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 Pfam PF00772 DnaB-like helicase N terminal domain 466 517 7.0E-7 T 25-04-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 SUPERFAMILY SSF56731 117 421 3.27E-102 T 25-04-2017 CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 Pfam PF13155 Toprim-like 261 346 2.1E-20 T 25-04-2017 CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 SUPERFAMILY SSF48024 465 517 5.49E-8 T 25-04-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 Gene3D G3DSA:3.90.580.10 3 99 1.2E-39 T 25-04-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 251 4.0E-41 T 25-04-2017 IPR013264 DNA primase, catalytic core, N-terminal CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 TIGRFAM TIGR01391 dnaG: DNA primase 5 415 4.5E-145 T 25-04-2017 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 Gene3D G3DSA:3.40.1360.10 241 361 4.9E-43 T 25-04-2017 CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 Pfam PF01807 CHC2 zinc finger 7 99 4.6E-38 T 25-04-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 SMART SM00400 36 90 1.3E-36 T 25-04-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 Hamap MF_00974 DNA primase [dnaG]. 4 589 28.417 T 25-04-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 SMART SM00493 258 329 6.9E-17 T 25-04-2017 IPR006171 Toprim domain CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 PIRSF PIRSF002811 2 602 1.4E-174 T 25-04-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 Gene3D G3DSA:3.90.980.10 117 240 2.4E-42 T 25-04-2017 IPR013264 DNA primase, catalytic core, N-terminal CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 Gene3D G3DSA:1.10.860.10 466 518 3.6E-7 T 25-04-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CLFO_RS12255 e393c0360c60ae21b2cb036f26ec94aa 613 SUPERFAMILY SSF57783 4 100 5.95E-37 T 25-04-2017 CLFO_RS02300 568e4b22e05cc96b645761e7b7901b7b 348 PIRSF PIRSF001455 13 347 6.2E-111 T 25-04-2017 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CLFO_RS02300 568e4b22e05cc96b645761e7b7901b7b 348 Gene3D G3DSA:1.20.1090.10 169 340 3.4E-56 T 25-04-2017 CLFO_RS02300 568e4b22e05cc96b645761e7b7901b7b 348 Pfam PF01761 3-dehydroquinate synthase 63 320 2.3E-102 T 25-04-2017 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CLFO_RS02300 568e4b22e05cc96b645761e7b7901b7b 348 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 339 4.7E-115 T 25-04-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CLFO_RS02300 568e4b22e05cc96b645761e7b7901b7b 348 Gene3D G3DSA:3.40.50.1970 3 168 4.0E-63 T 25-04-2017 CLFO_RS02300 568e4b22e05cc96b645761e7b7901b7b 348 SUPERFAMILY SSF56796 5 336 1.44E-99 T 25-04-2017 CLFO_RS02300 568e4b22e05cc96b645761e7b7901b7b 348 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 348 38.421 T 25-04-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CLFO_RS17520 f2a7e780af88c255a1674613d2de6c9b 216 Pfam PF02607 B12 binding domain 11 83 1.0E-13 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17520 f2a7e780af88c255a1674613d2de6c9b 216 SUPERFAMILY SSF52242 77 215 4.58E-41 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS17520 f2a7e780af88c255a1674613d2de6c9b 216 Gene3D G3DSA:3.40.50.280 82 216 9.2E-47 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS17520 f2a7e780af88c255a1674613d2de6c9b 216 SMART SM01018 5 90 4.5E-20 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17520 f2a7e780af88c255a1674613d2de6c9b 216 Gene3D G3DSA:1.10.1240.10 11 81 5.4E-12 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17520 f2a7e780af88c255a1674613d2de6c9b 216 SUPERFAMILY SSF47644 9 88 9.68E-18 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17520 f2a7e780af88c255a1674613d2de6c9b 216 Pfam PF02310 B12 binding domain 96 198 9.9E-23 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS11425 22cf0ec9a06e286f13ca678524005f90 73 SUPERFAMILY SSF63562 1 70 1.4E-23 T 25-04-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CLFO_RS11425 22cf0ec9a06e286f13ca678524005f90 73 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 15.649 T 25-04-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS11425 22cf0ec9a06e286f13ca678524005f90 73 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 3.4E-12 T 25-04-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CLFO_RS11425 22cf0ec9a06e286f13ca678524005f90 73 Pfam PF01192 RNA polymerase Rpb6 8 60 1.3E-14 T 25-04-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CLFO_RS11425 22cf0ec9a06e286f13ca678524005f90 73 SMART SM01409 8 60 2.3E-16 T 25-04-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CLFO_RS11425 22cf0ec9a06e286f13ca678524005f90 73 Gene3D G3DSA:3.90.940.10 1 70 8.6E-20 T 25-04-2017 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CLFO_RS05110 a71295b23b2469f0d32d7bfc511ac02f 188 SUPERFAMILY SSF55620 2 185 6.6E-79 T 25-04-2017 CLFO_RS05110 a71295b23b2469f0d32d7bfc511ac02f 188 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 6 184 1.4E-77 T 25-04-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 CLFO_RS05110 a71295b23b2469f0d32d7bfc511ac02f 188 Gene3D G3DSA:3.30.1130.10 57 185 4.5E-60 T 25-04-2017 CLFO_RS05110 a71295b23b2469f0d32d7bfc511ac02f 188 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 112 122 - T 25-04-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 CLFO_RS05110 a71295b23b2469f0d32d7bfc511ac02f 188 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 63 79 - T 25-04-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 CLFO_RS05110 a71295b23b2469f0d32d7bfc511ac02f 188 Gene3D G3DSA:1.10.286.10 1 52 4.8E-25 T 25-04-2017 CLFO_RS05110 a71295b23b2469f0d32d7bfc511ac02f 188 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 2 185 42.709 T 25-04-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 CLFO_RS05110 a71295b23b2469f0d32d7bfc511ac02f 188 Pfam PF01227 GTP cyclohydrolase I 6 184 1.4E-78 T 25-04-2017 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 CLFO_RS10750 da7417890d6adbabfbe3c57aec3774ff 395 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 25-04-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CLFO_RS10750 da7417890d6adbabfbe3c57aec3774ff 395 Pfam PF00155 Aminotransferase class I and II 31 389 2.0E-80 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS10750 da7417890d6adbabfbe3c57aec3774ff 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 197 220 1.5E-15 T 25-04-2017 CLFO_RS10750 da7417890d6adbabfbe3c57aec3774ff 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 161 185 1.5E-15 T 25-04-2017 CLFO_RS10750 da7417890d6adbabfbe3c57aec3774ff 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 114 135 1.5E-15 T 25-04-2017 CLFO_RS10750 da7417890d6adbabfbe3c57aec3774ff 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 228 252 1.5E-15 T 25-04-2017 CLFO_RS10750 da7417890d6adbabfbe3c57aec3774ff 395 Gene3D G3DSA:3.90.1150.10 274 395 4.1E-44 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS10750 da7417890d6adbabfbe3c57aec3774ff 395 SUPERFAMILY SSF53383 3 394 1.88E-124 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS10750 da7417890d6adbabfbe3c57aec3774ff 395 Gene3D G3DSA:3.40.640.10 44 273 2.1E-85 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS19435 4a24c3c1de41daa5e91b132573f3ebe7 253 SUPERFAMILY SSF47090 179 249 9.89E-16 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS19435 4a24c3c1de41daa5e91b132573f3ebe7 253 Pfam PF03734 L,D-transpeptidase catalytic domain 65 170 1.2E-20 T 25-04-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CLFO_RS19435 4a24c3c1de41daa5e91b132573f3ebe7 253 SUPERFAMILY SSF141523 58 171 1.57E-33 T 25-04-2017 CLFO_RS19435 4a24c3c1de41daa5e91b132573f3ebe7 253 Gene3D G3DSA:1.10.101.10 181 248 6.0E-16 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS19435 4a24c3c1de41daa5e91b132573f3ebe7 253 Gene3D G3DSA:2.40.440.10 59 171 1.8E-35 T 25-04-2017 CLFO_RS19435 4a24c3c1de41daa5e91b132573f3ebe7 253 Pfam PF01471 Putative peptidoglycan binding domain 191 234 1.1E-11 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS16290 6d00a187cc982125b18dad908d26fe2d 328 Gene3D G3DSA:3.40.50.720 3 115 6.1E-41 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16290 6d00a187cc982125b18dad908d26fe2d 328 SUPERFAMILY SSF52283 3 132 8.32E-35 T 25-04-2017 CLFO_RS16290 6d00a187cc982125b18dad908d26fe2d 328 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 25-04-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLFO_RS16290 6d00a187cc982125b18dad908d26fe2d 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 318 8.6E-30 T 25-04-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CLFO_RS16290 6d00a187cc982125b18dad908d26fe2d 328 Gene3D G3DSA:3.40.50.720 116 289 3.5E-62 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16290 6d00a187cc982125b18dad908d26fe2d 328 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 25-04-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLFO_RS16290 6d00a187cc982125b18dad908d26fe2d 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 286 1.4E-59 T 25-04-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLFO_RS16290 6d00a187cc982125b18dad908d26fe2d 328 SUPERFAMILY SSF51735 104 286 1.98E-57 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS08590 e35d8ae036efd94dd425adafbc278f23 215 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 8 115 1.0E-29 T 25-04-2017 IPR013559 YheO-like CLFO_RS08590 e35d8ae036efd94dd425adafbc278f23 215 Pfam PF13309 HTH domain 150 209 4.7E-24 T 25-04-2017 CLFO_RS08590 e35d8ae036efd94dd425adafbc278f23 215 Pfam PF08348 YheO-like PAS domain 9 120 1.2E-42 T 25-04-2017 IPR013559 YheO-like CLFO_RS08590 e35d8ae036efd94dd425adafbc278f23 215 Gene3D G3DSA:3.30.450.20 63 124 1.3E-6 T 25-04-2017 CLFO_RS13210 91f4295349b3c9ff800d86bd2fa1513d 396 Pfam PF01996 F420-0:Gamma-glutamyl ligase 11 389 1.8E-81 T 25-04-2017 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 CLFO_RS13210 91f4295349b3c9ff800d86bd2fa1513d 396 SUPERFAMILY SSF144010 7 76 1.83E-45 T 25-04-2017 CLFO_RS13210 91f4295349b3c9ff800d86bd2fa1513d 396 SUPERFAMILY SSF144010 357 395 1.83E-45 T 25-04-2017 CLFO_RS13210 91f4295349b3c9ff800d86bd2fa1513d 396 SUPERFAMILY SSF144010 153 198 1.83E-45 T 25-04-2017 CLFO_RS13210 91f4295349b3c9ff800d86bd2fa1513d 396 SUPERFAMILY SSF144010 237 329 1.83E-45 T 25-04-2017 CLFO_RS13210 91f4295349b3c9ff800d86bd2fa1513d 396 Gene3D G3DSA:3.30.1330.100 254 395 2.5E-52 T 25-04-2017 CLFO_RS13210 91f4295349b3c9ff800d86bd2fa1513d 396 Gene3D G3DSA:3.30.1330.100 3 61 2.5E-52 T 25-04-2017 CLFO_RS14895 87d5055e3ac036b902e76e1647b26e5d 286 SUPERFAMILY SSF52374 2 279 5.94E-108 T 25-04-2017 CLFO_RS14895 87d5055e3ac036b902e76e1647b26e5d 286 Pfam PF02569 Pantoate-beta-alanine ligase 2 278 2.2E-105 T 25-04-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CLFO_RS14895 87d5055e3ac036b902e76e1647b26e5d 286 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 39.971 T 25-04-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CLFO_RS14895 87d5055e3ac036b902e76e1647b26e5d 286 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 279 5.3E-110 T 25-04-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CLFO_RS14895 87d5055e3ac036b902e76e1647b26e5d 286 Gene3D G3DSA:3.40.50.620 2 174 3.3E-77 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS14895 87d5055e3ac036b902e76e1647b26e5d 286 Gene3D G3DSA:3.30.1300.10 175 280 1.3E-34 T 25-04-2017 CLFO_RS04485 e35671c1b148400cf26101761054c365 228 SUPERFAMILY SSF102114 20 189 9.68E-31 T 25-04-2017 CLFO_RS04485 e35671c1b148400cf26101761054c365 228 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 3 190 3.3E-67 T 25-04-2017 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein CLFO_RS04485 e35671c1b148400cf26101761054c365 228 Gene3D G3DSA:3.20.20.70 20 195 1.4E-29 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS04485 e35671c1b148400cf26101761054c365 228 Pfam PF13353 4Fe-4S single cluster domain 18 127 4.9E-12 T 25-04-2017 CLFO_RS04485 e35671c1b148400cf26101761054c365 228 ProSitePatterns PS01087 Radical activating enzymes signature. 15 36 - T 25-04-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLFO_RS04485 e35671c1b148400cf26101761054c365 228 Pfam PF04055 Radical SAM superfamily 22 162 9.8E-23 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS18000 c660b407460a19e064cbc611fd74a5f3 1143 SUPERFAMILY SSF52540 289 719 4.14E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18000 c660b407460a19e064cbc611fd74a5f3 1143 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 1 1128 0.0 T 25-04-2017 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 CLFO_RS18000 c660b407460a19e064cbc611fd74a5f3 1143 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1129 55.945 T 25-04-2017 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 CLFO_RS18000 c660b407460a19e064cbc611fd74a5f3 1143 Pfam PF13361 UvrD-like helicase C-terminal domain 299 640 1.0E-6 T 25-04-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CLFO_RS18000 c660b407460a19e064cbc611fd74a5f3 1143 SUPERFAMILY SSF52980 755 990 4.66E-7 T 25-04-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLFO_RS18000 c660b407460a19e064cbc611fd74a5f3 1143 Pfam PF12705 PD-(D/E)XK nuclease superfamily 759 1098 1.6E-56 T 25-04-2017 CLFO_RS18000 c660b407460a19e064cbc611fd74a5f3 1143 Gene3D G3DSA:3.40.50.300 557 660 4.2E-14 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18000 c660b407460a19e064cbc611fd74a5f3 1143 Gene3D G3DSA:3.40.50.300 296 381 4.2E-14 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13425 7cc75c237e4297e0997766ccaac3c8cc 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 2.6E-26 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS13425 7cc75c237e4297e0997766ccaac3c8cc 224 SUPERFAMILY SSF52172 1 175 5.28E-41 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS13425 7cc75c237e4297e0997766ccaac3c8cc 224 Pfam PF00072 Response regulator receiver domain 3 113 5.7E-28 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13425 7cc75c237e4297e0997766ccaac3c8cc 224 Gene3D G3DSA:1.10.10.10 124 223 1.8E-33 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13425 7cc75c237e4297e0997766ccaac3c8cc 224 SMART SM00862 145 220 2.3E-25 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS13425 7cc75c237e4297e0997766ccaac3c8cc 224 Gene3D G3DSA:3.40.50.2300 1 120 7.7E-40 T 25-04-2017 CLFO_RS13425 7cc75c237e4297e0997766ccaac3c8cc 224 SMART SM00448 1 112 5.6E-44 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13490 ced78024e6c082ee9aa66282a368a3f6 65 Pfam PF02416 mttA/Hcf106 family 4 46 1.7E-17 T 25-04-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CLFO_RS13490 ced78024e6c082ee9aa66282a368a3f6 65 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 65 16.156 T 25-04-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CLFO_RS13490 ced78024e6c082ee9aa66282a368a3f6 65 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.5E-7 T 25-04-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CLFO_RS13490 ced78024e6c082ee9aa66282a368a3f6 65 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.5E-7 T 25-04-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CLFO_RS13490 ced78024e6c082ee9aa66282a368a3f6 65 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.5E-7 T 25-04-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CLFO_RS12205 267643198467b2a44f611b800029d27c 294 SUPERFAMILY SSF161098 54 283 2.22E-64 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12205 267643198467b2a44f611b800029d27c 294 Gene3D G3DSA:1.10.3720.10 60 290 1.2E-62 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12205 267643198467b2a44f611b800029d27c 294 Gene3D G3DSA:1.20.58.370 11 43 8.2E-4 T 25-04-2017 CLFO_RS12205 267643198467b2a44f611b800029d27c 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 282 3.7E-17 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS20760 087555f6713c3f5dd3522c665031dc42 315 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 25 250 9.0E-67 T 25-04-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLFO_RS20760 087555f6713c3f5dd3522c665031dc42 315 Pfam PF03812 2-keto-3-deoxygluconate permease 3 307 4.2E-119 T 25-04-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLFO_RS18400 63ae812d5e9eeba29db177bd0082fcc1 291 Gene3D G3DSA:3.40.50.2300 2 127 3.1E-20 T 25-04-2017 CLFO_RS18400 63ae812d5e9eeba29db177bd0082fcc1 291 Pfam PF08664 YcbB domain 155 285 5.5E-39 T 25-04-2017 IPR013972 YcbB domain CLFO_RS18400 63ae812d5e9eeba29db177bd0082fcc1 291 Pfam PF00072 Response regulator receiver domain 6 115 1.7E-16 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18400 63ae812d5e9eeba29db177bd0082fcc1 291 SMART SM00448 3 116 1.4E-13 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18400 63ae812d5e9eeba29db177bd0082fcc1 291 SUPERFAMILY SSF52172 4 143 1.42E-22 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS12870 acb1b1c3cf76388f6c18cb69c51f09da 234 SMART SM00895 84 210 0.0093 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS12870 acb1b1c3cf76388f6c18cb69c51f09da 234 SUPERFAMILY SSF48008 82 210 9.68E-13 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS12870 acb1b1c3cf76388f6c18cb69c51f09da 234 SMART SM00345 16 74 3.8E-16 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS12870 acb1b1c3cf76388f6c18cb69c51f09da 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 1.6E-17 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS12870 acb1b1c3cf76388f6c18cb69c51f09da 234 Pfam PF07729 FCD domain 85 209 2.7E-12 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS12870 acb1b1c3cf76388f6c18cb69c51f09da 234 SUPERFAMILY SSF46785 6 78 4.6E-18 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12870 acb1b1c3cf76388f6c18cb69c51f09da 234 Gene3D G3DSA:1.10.10.10 4 75 1.5E-22 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12870 acb1b1c3cf76388f6c18cb69c51f09da 234 Gene3D G3DSA:1.20.120.530 81 215 2.1E-16 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS10405 9b9a388febea8e8d05bf7cebb8611064 136 Pfam PF09393 Phage tail tube protein 3 131 3.9E-43 T 25-04-2017 IPR018989 Phage tail tube protein CLFO_RS10405 9b9a388febea8e8d05bf7cebb8611064 136 SUPERFAMILY SSF69279 6 132 8.67E-39 T 25-04-2017 CLFO_RS01260 3c89fa9b86d4b69a8ffac50fdeb21a72 285 Pfam PF13624 SurA N-terminal domain 63 216 8.5E-21 T 25-04-2017 CLFO_RS01260 3c89fa9b86d4b69a8ffac50fdeb21a72 285 SUPERFAMILY SSF109998 96 249 2.35E-27 T 25-04-2017 IPR027304 Trigger factor/SurA domain CLFO_RS18620 fd386f88a1b20e1862011b63963efbe6 264 SMART SM00346 8 95 1.5E-22 T 25-04-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CLFO_RS18620 fd386f88a1b20e1862011b63963efbe6 264 SUPERFAMILY SSF46785 9 77 2.73E-13 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18620 fd386f88a1b20e1862011b63963efbe6 264 Pfam PF09339 IclR helix-turn-helix domain 10 58 1.5E-12 T 25-04-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CLFO_RS18620 fd386f88a1b20e1862011b63963efbe6 264 Gene3D G3DSA:1.10.10.10 8 78 5.5E-20 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18620 fd386f88a1b20e1862011b63963efbe6 264 Pfam PF01614 Bacterial transcriptional regulator 123 247 2.0E-38 T 25-04-2017 IPR014757 Transcription regulator IclR, C-terminal CLFO_RS18620 fd386f88a1b20e1862011b63963efbe6 264 Gene3D G3DSA:3.30.450.40 80 252 1.4E-62 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS18620 fd386f88a1b20e1862011b63963efbe6 264 SUPERFAMILY SSF55781 65 251 2.75E-53 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS12480 6a2da5a59cceb21a7021243523c9fc5e 433 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 5 432 3.1E-112 T 25-04-2017 CLFO_RS12480 6a2da5a59cceb21a7021243523c9fc5e 433 Pfam PF00919 Uncharacterized protein family UPF0004 3 98 2.6E-27 T 25-04-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CLFO_RS12480 6a2da5a59cceb21a7021243523c9fc5e 433 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 426 2.2E-143 T 25-04-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CLFO_RS12480 6a2da5a59cceb21a7021243523c9fc5e 433 SUPERFAMILY SSF102114 121 364 2.75E-59 T 25-04-2017 CLFO_RS12480 6a2da5a59cceb21a7021243523c9fc5e 433 SMART SM00729 142 360 2.1E-58 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS12480 6a2da5a59cceb21a7021243523c9fc5e 433 Pfam PF04055 Radical SAM superfamily 148 318 6.0E-26 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS12480 6a2da5a59cceb21a7021243523c9fc5e 433 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 418 5.1E-145 T 25-04-2017 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 CLFO_RS12480 6a2da5a59cceb21a7021243523c9fc5e 433 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 146 166 - T 25-04-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 CLFO_RS12480 6a2da5a59cceb21a7021243523c9fc5e 433 Gene3D G3DSA:3.80.30.20 140 372 6.7E-79 T 25-04-2017 IPR023404 Radical SAM, alpha/beta horseshoe CLFO_RS08950 7e010a80faeef296e046bd2c200596f7 46 Pfam PF13165 Protein of unknown function (DUF4001) 2 45 2.6E-23 T 25-04-2017 IPR023975 Six-cysteine peptide SCIFF CLFO_RS08950 7e010a80faeef296e046bd2c200596f7 46 TIGRFAM TIGR03973 six_Cys_in_45: six-cysteine peptide SCIFF 2 44 6.1E-24 T 25-04-2017 IPR023975 Six-cysteine peptide SCIFF CLFO_RS01065 c5463efca65c8ffe403d59d7db1d1d43 326 Pfam PF01551 Peptidase family M23 220 318 3.8E-22 T 25-04-2017 IPR016047 Peptidase M23 CLFO_RS01065 c5463efca65c8ffe403d59d7db1d1d43 326 SUPERFAMILY SSF51261 160 322 5.23E-31 T 25-04-2017 IPR011055 Duplicated hybrid motif CLFO_RS01065 c5463efca65c8ffe403d59d7db1d1d43 326 Gene3D G3DSA:2.70.70.10 168 324 7.4E-30 T 25-04-2017 CLFO_RS08970 458729559ed0209734201a18a9c9a156 295 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 1 284 27.653 T 25-04-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CLFO_RS08970 458729559ed0209734201a18a9c9a156 295 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 29 273 1.6E-76 T 25-04-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CLFO_RS08970 458729559ed0209734201a18a9c9a156 295 Pfam PF02355 Protein export membrane protein 106 282 6.2E-66 T 25-04-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLFO_RS08970 458729559ed0209734201a18a9c9a156 295 Gene3D G3DSA:1.20.1640.10 106 287 6.0E-27 T 25-04-2017 CLFO_RS08970 458729559ed0209734201a18a9c9a156 295 PRINTS PR01755 Bacterial translocase SecF protein signature 141 155 3.8E-32 T 25-04-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLFO_RS08970 458729559ed0209734201a18a9c9a156 295 PRINTS PR01755 Bacterial translocase SecF protein signature 189 207 3.8E-32 T 25-04-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLFO_RS08970 458729559ed0209734201a18a9c9a156 295 PRINTS PR01755 Bacterial translocase SecF protein signature 221 236 3.8E-32 T 25-04-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLFO_RS08970 458729559ed0209734201a18a9c9a156 295 PRINTS PR01755 Bacterial translocase SecF protein signature 28 43 3.8E-32 T 25-04-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLFO_RS08970 458729559ed0209734201a18a9c9a156 295 Pfam PF07549 SecD/SecF GG Motif 27 50 1.8E-9 T 25-04-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CLFO_RS08970 458729559ed0209734201a18a9c9a156 295 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 74 270 5.8E-55 T 25-04-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLFO_RS08970 458729559ed0209734201a18a9c9a156 295 SUPERFAMILY SSF82866 108 286 4.58E-40 T 25-04-2017 CLFO_RS14750 0a63f778bcad5ae9ab8a2f1151723313 529 Pfam PF00005 ABC transporter 335 467 5.7E-13 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS14750 0a63f778bcad5ae9ab8a2f1151723313 529 Pfam PF00005 ABC transporter 18 184 4.0E-24 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS14750 0a63f778bcad5ae9ab8a2f1151723313 529 SMART SM00382 344 512 1.8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS14750 0a63f778bcad5ae9ab8a2f1151723313 529 SMART SM00382 26 228 2.3E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS14750 0a63f778bcad5ae9ab8a2f1151723313 529 Gene3D G3DSA:3.40.50.300 317 527 4.1E-37 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14750 0a63f778bcad5ae9ab8a2f1151723313 529 Gene3D G3DSA:3.40.50.300 1 271 9.4E-55 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14750 0a63f778bcad5ae9ab8a2f1151723313 529 SUPERFAMILY SSF52540 125 258 6.81E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14750 0a63f778bcad5ae9ab8a2f1151723313 529 SUPERFAMILY SSF52540 2 92 6.81E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14750 0a63f778bcad5ae9ab8a2f1151723313 529 Pfam PF12848 ABC transporter 224 303 4.0E-20 T 25-04-2017 IPR032781 ABC-transporter extension domain CLFO_RS14750 0a63f778bcad5ae9ab8a2f1151723313 529 SUPERFAMILY SSF52540 296 525 4.17E-38 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02550 963542ea0d7047da192752686112903c 284 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 282 3.4E-111 T 25-04-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CLFO_RS02550 963542ea0d7047da192752686112903c 284 SUPERFAMILY SSF102114 20 276 9.29E-56 T 25-04-2017 CLFO_RS02550 963542ea0d7047da192752686112903c 284 PIRSF PIRSF005963 1 284 2.4E-130 T 25-04-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CLFO_RS02550 963542ea0d7047da192752686112903c 284 Gene3D G3DSA:3.20.20.70 21 280 5.9E-64 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS02550 963542ea0d7047da192752686112903c 284 SMART SM00729 50 254 2.7E-11 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS02550 963542ea0d7047da192752686112903c 284 Hamap MF_00206 Lipoyl synthase [lipA]. 1 284 125.008 T 25-04-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CLFO_RS02550 963542ea0d7047da192752686112903c 284 Pfam PF04055 Radical SAM superfamily 56 217 2.0E-11 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS12835 e7c7e04a797149a1d883e573a26341c3 156 SUPERFAMILY SSF52540 3 152 2.03E-35 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12835 e7c7e04a797149a1d883e573a26341c3 156 Gene3D G3DSA:3.40.50.300 2 151 6.7E-39 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12835 e7c7e04a797149a1d883e573a26341c3 156 Pfam PF00005 ABC transporter 1 151 4.2E-28 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS12270 2ce7fdf7ab52e187c41ad18474d94ecf 186 SUPERFAMILY SSF88946 4 111 7.59E-17 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12270 2ce7fdf7ab52e187c41ad18474d94ecf 186 Pfam PF08281 Sigma-70, region 4 123 174 8.1E-15 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12270 2ce7fdf7ab52e187c41ad18474d94ecf 186 Pfam PF04542 Sigma-70 region 2 24 91 7.8E-11 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12270 2ce7fdf7ab52e187c41ad18474d94ecf 186 Gene3D G3DSA:1.10.1740.10 4 113 9.8E-17 T 25-04-2017 CLFO_RS12270 2ce7fdf7ab52e187c41ad18474d94ecf 186 Gene3D G3DSA:1.10.10.10 118 176 2.5E-12 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12270 2ce7fdf7ab52e187c41ad18474d94ecf 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 177 4.3E-26 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12270 2ce7fdf7ab52e187c41ad18474d94ecf 186 SUPERFAMILY SSF88659 111 176 4.11E-12 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00750 e30d40e82db394ec55e72c09b9239b2f 279 SUPERFAMILY SSF51735 1 276 2.94E-94 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS00750 e30d40e82db394ec55e72c09b9239b2f 279 Pfam PF04321 RmlD substrate binding domain 1 276 1.5E-102 T 25-04-2017 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581 CLFO_RS00750 e30d40e82db394ec55e72c09b9239b2f 279 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 275 1.3E-103 T 25-04-2017 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581 CLFO_RS00750 e30d40e82db394ec55e72c09b9239b2f 279 Gene3D G3DSA:3.40.50.720 1 226 1.2E-61 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01625 94d9258f2b046bcd07adea5bfa0db108 267 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 241 262 1.0E-8 T 25-04-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLFO_RS01625 94d9258f2b046bcd07adea5bfa0db108 267 SMART SM00382 28 239 1.6E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS01625 94d9258f2b046bcd07adea5bfa0db108 267 Gene3D G3DSA:3.40.50.300 2 263 3.3E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01625 94d9258f2b046bcd07adea5bfa0db108 267 Pfam PF00005 ABC transporter 20 190 9.8E-31 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS01625 94d9258f2b046bcd07adea5bfa0db108 267 SUPERFAMILY SSF52540 3 262 5.43E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11380 8c1d223f7c30a937dd4c4fe85de520ed 244 SUPERFAMILY SSF81606 2 238 8.37E-69 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS11380 8c1d223f7c30a937dd4c4fe85de520ed 244 Pfam PF13672 Protein phosphatase 2C 13 219 8.4E-18 T 25-04-2017 CLFO_RS11380 8c1d223f7c30a937dd4c4fe85de520ed 244 SMART SM00332 1 239 8.2E-31 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS11380 8c1d223f7c30a937dd4c4fe85de520ed 244 SMART SM00331 7 241 1.8E-42 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS11380 8c1d223f7c30a937dd4c4fe85de520ed 244 Gene3D G3DSA:3.60.40.10 2 238 6.2E-73 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 SUPERFAMILY SSF89550 341 568 9.68E-55 T 25-04-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 Gene3D G3DSA:3.30.460.10 170 256 2.2E-17 T 25-04-2017 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 Gene3D G3DSA:3.30.210.10 257 315 1.4E-24 T 25-04-2017 IPR029398 DNA polymerase beta, thumb domain CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 Pfam PF14716 Helix-hairpin-helix domain 4 71 4.8E-16 T 25-04-2017 IPR010996 DNA polymerase beta-like, N-terminal domain CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 SMART SM00483 1 315 8.7E-17 T 25-04-2017 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 Gene3D G3DSA:1.10.150.110 4 84 4.3E-17 T 25-04-2017 IPR027421 DNA polymerase family X lyase domain CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 Gene3D G3DSA:1.10.150.20 94 147 8.1E-5 T 25-04-2017 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 SUPERFAMILY SSF81301 166 315 1.14E-37 T 25-04-2017 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 SUPERFAMILY SSF47802 3 84 1.44E-14 T 25-04-2017 IPR010996 DNA polymerase beta-like, N-terminal domain CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 SMART SM00278 126 145 79.0 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 SMART SM00278 51 70 670.0 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 SMART SM00278 91 110 42.0 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 Pfam PF14791 DNA polymerase beta thumb 255 315 3.8E-19 T 25-04-2017 IPR029398 DNA polymerase beta, thumb domain CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 SUPERFAMILY SSF47781 92 158 3.61E-5 T 25-04-2017 IPR010994 RuvA domain 2-like CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 255 262 1.3E-8 T 25-04-2017 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 58 75 1.3E-8 T 25-04-2017 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 240 248 1.3E-8 T 25-04-2017 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 297 314 1.3E-8 T 25-04-2017 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 Pfam PF02811 PHP domain 341 501 1.9E-9 T 25-04-2017 IPR004013 PHP domain GO:0003824 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 SMART SM00481 339 418 1.2E-12 T 25-04-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 PIRSF PIRSF005047 1 571 2.4E-223 T 25-04-2017 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 Pfam PF14520 Helix-hairpin-helix domain 92 144 5.2E-7 T 25-04-2017 CLFO_RS07145 80ba907c071a9f0325d446c32da763fe 571 Gene3D G3DSA:3.20.20.140 337 563 1.3E-52 T 25-04-2017 CLFO_RS06825 455808bbb73a794adcd9e213361c5384 88 SUPERFAMILY SSF55594 1 88 9.42E-29 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS06825 455808bbb73a794adcd9e213361c5384 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 7.7E-19 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS06825 455808bbb73a794adcd9e213361c5384 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 7.7E-19 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS06825 455808bbb73a794adcd9e213361c5384 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 7.7E-19 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS06825 455808bbb73a794adcd9e213361c5384 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 7.7E-29 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS06825 455808bbb73a794adcd9e213361c5384 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 25-04-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CLFO_RS06825 455808bbb73a794adcd9e213361c5384 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.1E-32 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS06825 455808bbb73a794adcd9e213361c5384 88 Gene3D G3DSA:3.30.1340.10 1 88 6.7E-34 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 PIRSF PIRSF000535 7 307 3.4E-26 T 25-04-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 25-04-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 Pfam PF00294 pfkB family carbohydrate kinase 1 295 1.1E-67 T 25-04-2017 IPR011611 Carbohydrate kinase PfkB CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 300 1.1E-97 T 25-04-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 25-04-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 Gene3D G3DSA:3.40.1190.20 2 305 8.7E-91 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 PRINTS PR00990 Ribokinase signature 173 188 6.0E-29 T 25-04-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 PRINTS PR00990 Ribokinase signature 33 52 6.0E-29 T 25-04-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 PRINTS PR00990 Ribokinase signature 105 118 6.0E-29 T 25-04-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 PRINTS PR00990 Ribokinase signature 6 27 6.0E-29 T 25-04-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 PRINTS PR00990 Ribokinase signature 217 228 6.0E-29 T 25-04-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 Hamap MF_01987 Ribokinase [rbsK]. 2 302 24.829 T 25-04-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 CLFO_RS06735 178ffd4aee3706fe5bf285ba8e63f459 308 SUPERFAMILY SSF53613 3 297 5.77E-79 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS05140 4e884c0f7d937ca1b86ac533a270ca5c 369 Pfam PF03054 tRNA methyl transferase 9 359 1.9E-146 T 25-04-2017 CLFO_RS05140 4e884c0f7d937ca1b86ac533a270ca5c 369 Gene3D G3DSA:2.40.30.10 281 365 1.5E-32 T 25-04-2017 CLFO_RS05140 4e884c0f7d937ca1b86ac533a270ca5c 369 Gene3D G3DSA:2.30.30.280 214 279 6.8E-31 T 25-04-2017 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 CLFO_RS05140 4e884c0f7d937ca1b86ac533a270ca5c 369 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9 359 4.1E-141 T 25-04-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CLFO_RS05140 4e884c0f7d937ca1b86ac533a270ca5c 369 SUPERFAMILY SSF52402 7 245 8.6E-60 T 25-04-2017 CLFO_RS05140 4e884c0f7d937ca1b86ac533a270ca5c 369 Gene3D G3DSA:3.40.50.620 4 212 2.2E-99 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS05140 4e884c0f7d937ca1b86ac533a270ca5c 369 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 8 360 41.171 T 25-04-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CLFO_RS09570 9f551c10c735a2595e882bc708babd6b 599 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 25-04-2017 IPR012902 Prokaryotic N-terminal methylation site CLFO_RS09570 9f551c10c735a2595e882bc708babd6b 599 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 9 32 2.3E-6 T 25-04-2017 IPR012902 Prokaryotic N-terminal methylation site CLFO_RS09570 9f551c10c735a2595e882bc708babd6b 599 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 2.9E-5 T 25-04-2017 IPR012902 Prokaryotic N-terminal methylation site CLFO_RS19495 c58a7eb7f45bacbef9dcf8540a83a598 449 Gene3D G3DSA:3.40.50.2030 278 439 1.0E-63 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS19495 c58a7eb7f45bacbef9dcf8540a83a598 449 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 44 448 3.2E-170 T 25-04-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS19495 c58a7eb7f45bacbef9dcf8540a83a598 449 SUPERFAMILY SSF56821 21 438 1.12E-149 T 25-04-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLFO_RS19495 c58a7eb7f45bacbef9dcf8540a83a598 449 Hamap MF_00069 Hydroxylamine reductase [hcp]. 22 449 16.766 T 25-04-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS19495 c58a7eb7f45bacbef9dcf8540a83a598 449 Pfam PF03063 Prismane/CO dehydrogenase family 22 98 7.2E-16 T 25-04-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS19495 c58a7eb7f45bacbef9dcf8540a83a598 449 Pfam PF03063 Prismane/CO dehydrogenase family 101 435 7.4E-105 T 25-04-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS19495 c58a7eb7f45bacbef9dcf8540a83a598 449 Gene3D G3DSA:3.40.50.2030 134 277 1.1E-60 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS19495 c58a7eb7f45bacbef9dcf8540a83a598 449 Gene3D G3DSA:1.20.1270.20 48 131 6.1E-34 T 25-04-2017 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS00185 f0b4032e2299c6e37aa235c1112924bd 77 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 77 2.0E-19 T 25-04-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00185 f0b4032e2299c6e37aa235c1112924bd 77 SUPERFAMILY SSF46911 3 76 8.89E-29 T 25-04-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00185 f0b4032e2299c6e37aa235c1112924bd 77 TIGRFAM TIGR00165 S18: ribosomal protein bS18 9 76 8.5E-32 T 25-04-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00185 f0b4032e2299c6e37aa235c1112924bd 77 Gene3D G3DSA:4.10.640.10 12 77 2.1E-31 T 25-04-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00185 f0b4032e2299c6e37aa235c1112924bd 77 PRINTS PR00974 Ribosomal protein S18 family signature 64 74 1.8E-17 T 25-04-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00185 f0b4032e2299c6e37aa235c1112924bd 77 PRINTS PR00974 Ribosomal protein S18 family signature 32 42 1.8E-17 T 25-04-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00185 f0b4032e2299c6e37aa235c1112924bd 77 PRINTS PR00974 Ribosomal protein S18 family signature 42 49 1.8E-17 T 25-04-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00185 f0b4032e2299c6e37aa235c1112924bd 77 PRINTS PR00974 Ribosomal protein S18 family signature 50 64 1.8E-17 T 25-04-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00185 f0b4032e2299c6e37aa235c1112924bd 77 Pfam PF01084 Ribosomal protein S18 21 72 5.8E-25 T 25-04-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00185 f0b4032e2299c6e37aa235c1112924bd 77 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 4 77 20.589 T 25-04-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS14710 993f13bc8dc2da816d7d288d1e733c16 245 Gene3D G3DSA:1.10.10.10 8 79 1.9E-19 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS14710 993f13bc8dc2da816d7d288d1e733c16 245 SUPERFAMILY SSF48008 85 213 1.91E-18 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS14710 993f13bc8dc2da816d7d288d1e733c16 245 Gene3D G3DSA:1.20.120.530 82 223 3.9E-19 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS14710 993f13bc8dc2da816d7d288d1e733c16 245 SUPERFAMILY SSF46785 10 91 1.09E-16 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS14710 993f13bc8dc2da816d7d288d1e733c16 245 Pfam PF07729 FCD domain 92 211 2.5E-17 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS14710 993f13bc8dc2da816d7d288d1e733c16 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 78 3.5E-15 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS14710 993f13bc8dc2da816d7d288d1e733c16 245 SMART SM00345 20 78 3.5E-15 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS10065 00b2e2914e3585acc26fceead16c64e3 290 SUPERFAMILY SSF143414 205 277 1.44E-11 T 25-04-2017 CLFO_RS10065 00b2e2914e3585acc26fceead16c64e3 290 SMART SM00877 205 282 1.3E-16 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS10065 00b2e2914e3585acc26fceead16c64e3 290 SMART SM00877 99 181 9.5E-10 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS10065 00b2e2914e3585acc26fceead16c64e3 290 SUPERFAMILY SSF143414 99 175 3.66E-8 T 25-04-2017 CLFO_RS10065 00b2e2914e3585acc26fceead16c64e3 290 Pfam PF00936 BMC domain 100 168 7.3E-11 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS10065 00b2e2914e3585acc26fceead16c64e3 290 Pfam PF00936 BMC domain 206 271 1.4E-14 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS10065 00b2e2914e3585acc26fceead16c64e3 290 TIGRFAM TIGR04501 microcomp_PduB: microcompartment protein PduB 66 290 3.1E-120 T 25-04-2017 IPR030984 Microcompartment protein PduB GO:0005198 CLFO_RS03150 e24aa92b3617962ab54023e41f475965 370 Pfam PF07853 Protein of unknown function (DUF1648) 146 193 1.0E-11 T 25-04-2017 IPR012867 Domain of unknown function DUF1648 CLFO_RS03150 e24aa92b3617962ab54023e41f475965 370 PIRSF PIRSF032908 1 369 4.4E-68 T 25-04-2017 IPR014574 Uncharacterised conserved protein UCP032908 CLFO_RS01275 b14be18953b8164580eae54976f556ff 930 SUPERFAMILY SSF49265 519 591 9.68E-11 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS01275 b14be18953b8164580eae54976f556ff 930 Pfam PF00395 S-layer homology domain 761 802 6.0E-19 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS01275 b14be18953b8164580eae54976f556ff 930 Pfam PF00395 S-layer homology domain 819 860 1.1E-13 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS01275 b14be18953b8164580eae54976f556ff 930 Pfam PF00395 S-layer homology domain 878 920 2.4E-13 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS01275 b14be18953b8164580eae54976f556ff 930 SMART SM00060 511 582 4.9E-7 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS01275 b14be18953b8164580eae54976f556ff 930 Gene3D G3DSA:2.60.40.10 519 585 1.2E-10 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS05800 e41407d54e3c7b13a78534ef31d7183f 363 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 329 1.2E-44 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS05800 e41407d54e3c7b13a78534ef31d7183f 363 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 30 338 8.2E-135 T 25-04-2017 IPR017778 ABC transporter, urea, permease protein, UrtC CLFO_RS02035 419802d3b918e07efd967ad30497eab9 207 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 5 198 6.2E-59 T 25-04-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CLFO_RS02035 419802d3b918e07efd967ad30497eab9 207 SUPERFAMILY SSF53328 5 203 6.93E-55 T 25-04-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLFO_RS02035 419802d3b918e07efd967ad30497eab9 207 Pfam PF00551 Formyl transferase 5 189 6.3E-49 T 25-04-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLFO_RS02035 419802d3b918e07efd967ad30497eab9 207 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 195 29.495 T 25-04-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CLFO_RS02035 419802d3b918e07efd967ad30497eab9 207 Gene3D G3DSA:3.40.50.170 5 203 1.6E-61 T 25-04-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CLFO_RS20020 e33db9c759f02da9d98d9b3ea1fcffce 465 SUPERFAMILY SSF82829 212 321 2.22E-18 T 25-04-2017 CLFO_RS20020 e33db9c759f02da9d98d9b3ea1fcffce 465 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 2 315 26.061 T 25-04-2017 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLFO_RS20020 e33db9c759f02da9d98d9b3ea1fcffce 465 Gene3D G3DSA:3.40.50.620 3 182 2.5E-20 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS20020 e33db9c759f02da9d98d9b3ea1fcffce 465 SUPERFAMILY SSF52402 7 234 2.21E-58 T 25-04-2017 CLFO_RS20020 e33db9c759f02da9d98d9b3ea1fcffce 465 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 204 4.6E-59 T 25-04-2017 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLFO_RS20020 e33db9c759f02da9d98d9b3ea1fcffce 465 SMART SM00977 384 456 3.0E-29 T 25-04-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLFO_RS20020 e33db9c759f02da9d98d9b3ea1fcffce 465 SUPERFAMILY SSF56037 373 456 7.85E-23 T 25-04-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 CLFO_RS20020 e33db9c759f02da9d98d9b3ea1fcffce 465 Pfam PF01171 PP-loop family 20 199 2.2E-54 T 25-04-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CLFO_RS20020 e33db9c759f02da9d98d9b3ea1fcffce 465 Gene3D G3DSA:3.50.40.10 373 454 6.2E-5 T 25-04-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 CLFO_RS20020 e33db9c759f02da9d98d9b3ea1fcffce 465 Pfam PF11734 TilS substrate C-terminal domain 384 451 4.1E-18 T 25-04-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLFO_RS20020 e33db9c759f02da9d98d9b3ea1fcffce 465 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 384 430 3.2E-17 T 25-04-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CLFO_RS18785 9e2a73f0b2f4575917429f9683fd29b9 600 Pfam PF09299 Mu transposase, C-terminal 513 578 2.6E-5 T 25-04-2017 IPR015378 Transposase-like, Mu, C-terminal CLFO_RS18785 9e2a73f0b2f4575917429f9683fd29b9 600 Gene3D G3DSA:3.30.420.10 283 454 1.5E-10 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS18785 9e2a73f0b2f4575917429f9683fd29b9 600 SUPERFAMILY SSF53098 303 424 7.97E-5 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS18785 9e2a73f0b2f4575917429f9683fd29b9 600 Pfam PF00665 Integrase core domain 283 421 6.0E-10 T 25-04-2017 IPR001584 Integrase, catalytic core GO:0015074 CLFO_RS16420 5f67c5d8a458537dc7ddc610f7cfab6f 493 SUPERFAMILY SSF53686 2 491 5.46E-146 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS16420 5f67c5d8a458537dc7ddc610f7cfab6f 493 Pfam PF14821 Threonine synthase N terminus 2 78 4.7E-22 T 25-04-2017 IPR029144 Threonine synthase, N-terminal CLFO_RS16420 5f67c5d8a458537dc7ddc610f7cfab6f 493 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 422 2.0E-18 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS16420 5f67c5d8a458537dc7ddc610f7cfab6f 493 Gene3D G3DSA:3.90.1380.10 2 82 2.8E-25 T 25-04-2017 IPR029144 Threonine synthase, N-terminal CLFO_RS16420 5f67c5d8a458537dc7ddc610f7cfab6f 493 Gene3D G3DSA:3.40.50.1100 202 446 8.0E-92 T 25-04-2017 CLFO_RS16420 5f67c5d8a458537dc7ddc610f7cfab6f 493 Gene3D G3DSA:3.40.50.1100 122 201 1.3E-8 T 25-04-2017 CLFO_RS16420 5f67c5d8a458537dc7ddc610f7cfab6f 493 TIGRFAM TIGR00260 thrC: threonine synthase 59 440 8.3E-79 T 25-04-2017 IPR004450 Threonine synthase-like CLFO_RS05260 0352ea23f5755c9ad9e1a23133a2ebdb 231 Gene3D G3DSA:1.25.40.10 121 197 3.4E-6 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS05260 0352ea23f5755c9ad9e1a23133a2ebdb 231 SUPERFAMILY SSF81901 118 199 3.66E-6 T 25-04-2017 CLFO_RS05260 0352ea23f5755c9ad9e1a23133a2ebdb 231 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 5 216 5.5E-66 T 25-04-2017 IPR018708 Protein of unknown function DUF2225 CLFO_RS02245 1f8d0d8a8c64ee6293dc7c462b4c592d 488 Gene3D G3DSA:3.60.120.10 14 479 6.6E-166 T 25-04-2017 IPR005801 ADC synthase GO:0009058 CLFO_RS02245 1f8d0d8a8c64ee6293dc7c462b4c592d 488 Pfam PF00425 chorismate binding enzyme 219 472 1.1E-99 T 25-04-2017 IPR015890 Chorismate-utilising enzyme, C-terminal CLFO_RS02245 1f8d0d8a8c64ee6293dc7c462b4c592d 488 SUPERFAMILY SSF56322 17 478 4.32E-151 T 25-04-2017 IPR005801 ADC synthase GO:0009058 CLFO_RS02245 1f8d0d8a8c64ee6293dc7c462b4c592d 488 PRINTS PR00095 Anthranilate synthase component I signature 429 443 1.3E-24 T 25-04-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS02245 1f8d0d8a8c64ee6293dc7c462b4c592d 488 PRINTS PR00095 Anthranilate synthase component I signature 320 333 1.3E-24 T 25-04-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS02245 1f8d0d8a8c64ee6293dc7c462b4c592d 488 PRINTS PR00095 Anthranilate synthase component I signature 414 428 1.3E-24 T 25-04-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS02245 1f8d0d8a8c64ee6293dc7c462b4c592d 488 PRINTS PR00095 Anthranilate synthase component I signature 334 347 1.3E-24 T 25-04-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS02245 1f8d0d8a8c64ee6293dc7c462b4c592d 488 Pfam PF04715 Anthranilate synthase component I, N terminal region 28 166 3.4E-34 T 25-04-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS02245 1f8d0d8a8c64ee6293dc7c462b4c592d 488 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 28 479 4.3E-179 T 25-04-2017 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS18130 400ecc9dd6be96a329db447301257cb1 381 SUPERFAMILY SSF53335 180 359 5.9E-42 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS18130 400ecc9dd6be96a329db447301257cb1 381 Pfam PF03705 CheR methyltransferase, all-alpha domain 118 160 1.3E-5 T 25-04-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLFO_RS18130 400ecc9dd6be96a329db447301257cb1 381 PRINTS PR00996 Glutamate methyltransferase family signature 209 229 1.8E-27 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS18130 400ecc9dd6be96a329db447301257cb1 381 PRINTS PR00996 Glutamate methyltransferase family signature 241 257 1.8E-27 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS18130 400ecc9dd6be96a329db447301257cb1 381 PRINTS PR00996 Glutamate methyltransferase family signature 173 185 1.8E-27 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS18130 400ecc9dd6be96a329db447301257cb1 381 PRINTS PR00996 Glutamate methyltransferase family signature 315 329 1.8E-27 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS18130 400ecc9dd6be96a329db447301257cb1 381 PRINTS PR00996 Glutamate methyltransferase family signature 334 357 1.8E-27 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS18130 400ecc9dd6be96a329db447301257cb1 381 Gene3D G3DSA:3.40.50.150 179 374 7.0E-56 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS18130 400ecc9dd6be96a329db447301257cb1 381 Pfam PF01739 CheR methyltransferase, SAM binding domain 180 359 1.1E-43 T 25-04-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLFO_RS18130 400ecc9dd6be96a329db447301257cb1 381 SUPERFAMILY SSF47757 112 178 1.57E-6 T 25-04-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLFO_RS18130 400ecc9dd6be96a329db447301257cb1 381 SMART SM00138 114 376 1.3E-40 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS09930 929c3e2ffb9fa1c854736754100e5a55 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 1.0E-22 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS09930 929c3e2ffb9fa1c854736754100e5a55 228 Gene3D G3DSA:1.10.10.10 129 227 1.2E-31 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09930 929c3e2ffb9fa1c854736754100e5a55 228 Gene3D G3DSA:3.40.50.2300 1 128 1.4E-38 T 25-04-2017 CLFO_RS09930 929c3e2ffb9fa1c854736754100e5a55 228 SUPERFAMILY SSF46894 127 227 3.12E-27 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS09930 929c3e2ffb9fa1c854736754100e5a55 228 SUPERFAMILY SSF52172 1 129 3.56E-39 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS09930 929c3e2ffb9fa1c854736754100e5a55 228 SMART SM00862 151 226 6.7E-24 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS09930 929c3e2ffb9fa1c854736754100e5a55 228 SMART SM00448 2 112 2.7E-40 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS09930 929c3e2ffb9fa1c854736754100e5a55 228 Pfam PF00072 Response regulator receiver domain 4 113 4.7E-28 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS12475 ad13aec8e6cae8535eae92e8502de91c 115 SUPERFAMILY SSF54197 1 113 1.56E-38 T 25-04-2017 IPR011146 HIT-like domain GO:0003824 CLFO_RS12475 ad13aec8e6cae8535eae92e8502de91c 115 PRINTS PR00332 Histidine triad family signature 5 21 2.2E-19 T 25-04-2017 IPR001310 Histidine triad (HIT) protein CLFO_RS12475 ad13aec8e6cae8535eae92e8502de91c 115 PRINTS PR00332 Histidine triad family signature 26 44 2.2E-19 T 25-04-2017 IPR001310 Histidine triad (HIT) protein CLFO_RS12475 ad13aec8e6cae8535eae92e8502de91c 115 PRINTS PR00332 Histidine triad family signature 95 105 2.2E-19 T 25-04-2017 IPR001310 Histidine triad (HIT) protein CLFO_RS12475 ad13aec8e6cae8535eae92e8502de91c 115 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 25-04-2017 IPR019808 Histidine triad, conserved site CLFO_RS12475 ad13aec8e6cae8535eae92e8502de91c 115 Gene3D G3DSA:3.30.428.10 1 115 2.7E-43 T 25-04-2017 IPR011146 HIT-like domain GO:0003824 CLFO_RS12475 ad13aec8e6cae8535eae92e8502de91c 115 Pfam PF01230 HIT domain 11 109 2.9E-29 T 25-04-2017 IPR001310 Histidine triad (HIT) protein CLFO_RS09520 87ef538a3b10a36892f3765ffda4510b 415 SUPERFAMILY SSF51366 12 145 7.06E-6 T 25-04-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLFO_RS09520 87ef538a3b10a36892f3765ffda4510b 415 Pfam PF01136 Peptidase family U32 75 309 2.4E-102 T 25-04-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLFO_RS09520 87ef538a3b10a36892f3765ffda4510b 415 Pfam PF16325 Peptidase family U32 C-terminal domain 322 404 9.3E-30 T 25-04-2017 IPR032525 Peptidase family U32, C-terminal CLFO_RS09520 87ef538a3b10a36892f3765ffda4510b 415 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 25-04-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLFO_RS11240 14a905d154ac92a686ee7c1140b73f63 456 Gene3D G3DSA:3.40.50.300 249 454 7.9E-82 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11240 14a905d154ac92a686ee7c1140b73f63 456 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 427 440 - T 25-04-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS11240 14a905d154ac92a686ee7c1140b73f63 456 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 182 454 63.737 T 25-04-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CLFO_RS11240 14a905d154ac92a686ee7c1140b73f63 456 SUPERFAMILY SSF52540 251 454 3.41E-52 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11240 14a905d154ac92a686ee7c1140b73f63 456 SMART SM00962 253 454 1.9E-119 T 25-04-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS11240 14a905d154ac92a686ee7c1140b73f63 456 Pfam PF02881 SRP54-type protein, helical bundle domain 170 235 3.2E-14 T 25-04-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS11240 14a905d154ac92a686ee7c1140b73f63 456 Gene3D G3DSA:1.20.120.140 145 235 2.1E-28 T 25-04-2017 CLFO_RS11240 14a905d154ac92a686ee7c1140b73f63 456 SMART SM00382 252 432 8.4E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS11240 14a905d154ac92a686ee7c1140b73f63 456 Pfam PF00448 SRP54-type protein, GTPase domain 253 453 1.3E-79 T 25-04-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS11240 14a905d154ac92a686ee7c1140b73f63 456 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 182 453 1.9E-113 T 25-04-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CLFO_RS11240 14a905d154ac92a686ee7c1140b73f63 456 SUPERFAMILY SSF47364 153 233 2.09E-22 T 25-04-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS11240 14a905d154ac92a686ee7c1140b73f63 456 SMART SM00963 158 239 1.7E-24 T 25-04-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS09650 944684fdb0e6363e3f1b02ff65f2caf9 140 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 87 122 7.4E-6 T 25-04-2017 IPR011723 Zinc finger/thioredoxin putative CLFO_RS09650 944684fdb0e6363e3f1b02ff65f2caf9 140 SUPERFAMILY SSF144217 71 125 1.96E-5 T 25-04-2017 CLFO_RS13865 e1bf773afefb9e98c857cbd5950a9b20 561 Pfam PF17159 Membrane-associated sensor domain 46 273 2.6E-62 T 25-04-2017 IPR033425 Membrane-associated sensor domain MASE3 CLFO_RS13865 e1bf773afefb9e98c857cbd5950a9b20 561 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 358 557 1.5E-27 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS13865 e1bf773afefb9e98c857cbd5950a9b20 561 SUPERFAMILY SSF81606 471 557 2.35E-5 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS13865 e1bf773afefb9e98c857cbd5950a9b20 561 SMART SM00331 331 557 1.0E-18 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS04820 0d49a8caed57e6c2dbed2c9799a6a49d 342 SUPERFAMILY SSF47336 1 55 2.45E-5 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04820 0d49a8caed57e6c2dbed2c9799a6a49d 342 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 257 273 - T 25-04-2017 IPR018201 Beta-ketoacyl synthase, active site CLFO_RS04820 0d49a8caed57e6c2dbed2c9799a6a49d 342 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 262 280 - T 25-04-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CLFO_RS04820 0d49a8caed57e6c2dbed2c9799a6a49d 342 Gene3D G3DSA:3.40.47.10 100 340 1.3E-63 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04820 0d49a8caed57e6c2dbed2c9799a6a49d 342 Gene3D G3DSA:1.10.1200.10 3 41 4.8E-7 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04820 0d49a8caed57e6c2dbed2c9799a6a49d 342 Gene3D G3DSA:1.10.1200.10 76 99 4.8E-7 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS04820 0d49a8caed57e6c2dbed2c9799a6a49d 342 SMART SM00825 Beta-ketoacyl synthase 94 341 2.3E-17 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS04820 0d49a8caed57e6c2dbed2c9799a6a49d 342 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 92 340 2.1E-66 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS04820 0d49a8caed57e6c2dbed2c9799a6a49d 342 SUPERFAMILY SSF53901 92 340 1.85E-54 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS18060 e835b9564797afdaae234086861e5c5b 265 Gene3D G3DSA:3.20.20.150 11 264 8.5E-25 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS18060 e835b9564797afdaae234086861e5c5b 265 SUPERFAMILY SSF51658 9 262 1.96E-37 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS18060 e835b9564797afdaae234086861e5c5b 265 Pfam PF01261 Xylose isomerase-like TIM barrel 21 225 1.1E-12 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS21435 1585da1f4c09ff5c52b3d4083b970585 113 SUPERFAMILY SSF54211 1 108 1.11E-27 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS21435 1585da1f4c09ff5c52b3d4083b970585 113 Gene3D G3DSA:3.30.230.10 1 105 5.2E-34 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS21435 1585da1f4c09ff5c52b3d4083b970585 113 Pfam PF00825 Ribonuclease P 1 104 6.7E-30 T 25-04-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CLFO_RS21435 1585da1f4c09ff5c52b3d4083b970585 113 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 1 104 4.8E-26 T 25-04-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CLFO_RS21435 1585da1f4c09ff5c52b3d4083b970585 113 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 104 2.0E-21 T 25-04-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CLFO_RS21435 1585da1f4c09ff5c52b3d4083b970585 113 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 110 17.8 T 25-04-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CLFO_RS14185 c8bb2187712e350226a3e90a3c57f356 307 Pfam PF07728 AAA domain (dynein-related subfamily) 62 194 2.0E-18 T 25-04-2017 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CLFO_RS14185 c8bb2187712e350226a3e90a3c57f356 307 Gene3D G3DSA:3.40.50.300 48 211 3.4E-28 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14185 c8bb2187712e350226a3e90a3c57f356 307 SUPERFAMILY SSF52540 55 260 6.99E-25 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09675 891c10d177b1987952fbbb9e72255120 390 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 1 383 2.0E-116 T 25-04-2017 IPR014194 Sporulation stage III, protein AE CLFO_RS09675 891c10d177b1987952fbbb9e72255120 390 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 63 382 3.3E-112 T 25-04-2017 IPR014194 Sporulation stage III, protein AE CLFO_RS17140 853c2c772cd88b945b170ef5357d898f 448 SUPERFAMILY SSF116734 34 214 2.29E-18 T 25-04-2017 CLFO_RS17140 853c2c772cd88b945b170ef5357d898f 448 Pfam PF01420 Type I restriction modification DNA specificity domain 258 418 1.7E-10 T 25-04-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CLFO_RS17140 853c2c772cd88b945b170ef5357d898f 448 Pfam PF01420 Type I restriction modification DNA specificity domain 35 185 2.0E-9 T 25-04-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CLFO_RS17140 853c2c772cd88b945b170ef5357d898f 448 SUPERFAMILY SSF116734 255 437 1.8E-22 T 25-04-2017 CLFO_RS03205 46d54285ddb91feb6ebc4928b3f59f1d 382 Gene3D G3DSA:3.40.640.10 15 256 3.6E-72 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS03205 46d54285ddb91feb6ebc4928b3f59f1d 382 Gene3D G3DSA:3.90.1150.10 257 378 4.0E-24 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS03205 46d54285ddb91feb6ebc4928b3f59f1d 382 SUPERFAMILY SSF53383 3 378 2.1E-100 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS03205 46d54285ddb91feb6ebc4928b3f59f1d 382 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 3 378 1.7E-141 T 25-04-2017 IPR010969 Cysteine desulfurase-related, unknown function CLFO_RS03205 46d54285ddb91feb6ebc4928b3f59f1d 382 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 212 - T 25-04-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLFO_RS03205 46d54285ddb91feb6ebc4928b3f59f1d 382 PIRSF PIRSF005572 1 382 6.4E-56 T 25-04-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CLFO_RS03205 46d54285ddb91feb6ebc4928b3f59f1d 382 Pfam PF00266 Aminotransferase class-V 3 371 3.0E-93 T 25-04-2017 IPR000192 Aminotransferase class V domain CLFO_RS11850 bf69923d8e8f277d49efab285e9fca79 207 Gene3D G3DSA:3.20.20.70 2 206 1.4E-79 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS11850 bf69923d8e8f277d49efab285e9fca79 207 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 201 4.1E-70 T 25-04-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS11850 bf69923d8e8f277d49efab285e9fca79 207 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 206 30.172 T 25-04-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS11850 bf69923d8e8f277d49efab285e9fca79 207 Pfam PF02581 Thiamine monophosphate synthase/TENI 7 188 1.5E-66 T 25-04-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS11850 bf69923d8e8f277d49efab285e9fca79 207 SUPERFAMILY SSF51391 3 205 5.62E-70 T 25-04-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 SUPERFAMILY SSF52172 1 127 4.27E-34 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 SUPERFAMILY SSF46689 195 245 8.51E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 Gene3D G3DSA:1.10.10.60 141 195 1.4E-18 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 211 226 3.6E-6 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 226 242 3.6E-6 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 Gene3D G3DSA:1.10.10.60 196 244 1.7E-16 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 Pfam PF12833 Helix-turn-helix domain 166 244 2.9E-22 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 196 238 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 Gene3D G3DSA:3.40.50.2300 1 125 3.0E-34 T 25-04-2017 CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 SMART SM00448 1 114 4.9E-30 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 Pfam PF00072 Response regulator receiver domain 4 114 1.4E-25 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 SMART SM00342 159 242 3.6E-31 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS01600 59ac0ce47aea1bf5bb002cf87f943f2b 248 SUPERFAMILY SSF46689 142 193 1.29E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS15085 e0ea62e93e9887255a8ededb4c4c386f 1115 Pfam PF05569 BlaR1 peptidase M56 9 101 3.8E-11 T 25-04-2017 IPR008756 Peptidase M56 CLFO_RS15085 e0ea62e93e9887255a8ededb4c4c386f 1115 Pfam PF05569 BlaR1 peptidase M56 151 352 6.6E-52 T 25-04-2017 IPR008756 Peptidase M56 CLFO_RS15085 e0ea62e93e9887255a8ededb4c4c386f 1115 Pfam PF13416 Bacterial extracellular solute-binding protein 746 1021 1.2E-16 T 25-04-2017 CLFO_RS15085 e0ea62e93e9887255a8ededb4c4c386f 1115 SUPERFAMILY SSF53850 695 1109 2.8E-35 T 25-04-2017 CLFO_RS15085 e0ea62e93e9887255a8ededb4c4c386f 1115 Gene3D G3DSA:3.30.2010.10 195 271 4.6E-6 T 25-04-2017 CLFO_RS15085 e0ea62e93e9887255a8ededb4c4c386f 1115 SUPERFAMILY SSF101898 401 540 1.44E-11 T 25-04-2017 CLFO_RS15085 e0ea62e93e9887255a8ededb4c4c386f 1115 SUPERFAMILY SSF101898 587 662 1.44E-11 T 25-04-2017 CLFO_RS15085 e0ea62e93e9887255a8ededb4c4c386f 1115 Gene3D G3DSA:3.40.190.10 856 1007 1.9E-14 T 25-04-2017 CLFO_RS15085 e0ea62e93e9887255a8ededb4c4c386f 1115 Gene3D G3DSA:2.120.10.30 403 543 2.7E-9 T 25-04-2017 IPR011042 Six-bladed beta-propeller, TolB-like CLFO_RS15085 e0ea62e93e9887255a8ededb4c4c386f 1115 Gene3D G3DSA:2.120.10.30 590 660 2.7E-9 T 25-04-2017 IPR011042 Six-bladed beta-propeller, TolB-like CLFO_RS15085 e0ea62e93e9887255a8ededb4c4c386f 1115 Gene3D G3DSA:3.40.190.10 694 855 7.9E-26 T 25-04-2017 CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 Gene3D G3DSA:3.40.50.720 1 257 1.2E-89 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 25-04-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 Pfam PF00106 short chain dehydrogenase 6 195 1.2E-63 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.2E-41 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 4.2E-41 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.2E-41 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.2E-41 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.2E-41 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.2E-41 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 SUPERFAMILY SSF51735 4 257 4.89E-84 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 7.7E-13 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 7.7E-13 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16735 3867695fd7c2007784c185b02bffda2a 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 7.7E-13 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS07025 c38c80a67a775a770c75d2947c667fa2 116 Gene3D G3DSA:2.60.120.10 17 106 4.8E-21 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS07025 c38c80a67a775a770c75d2947c667fa2 116 SUPERFAMILY SSF51182 20 105 6.9E-17 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS07025 c38c80a67a775a770c75d2947c667fa2 116 Pfam PF07883 Cupin domain 33 92 7.7E-10 T 25-04-2017 IPR013096 Cupin 2, conserved barrel CLFO_RS14635 6f64492000fc3b324e65b3e202a58d7b 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 468 676 1.0E-41 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS14635 6f64492000fc3b324e65b3e202a58d7b 678 SUPERFAMILY SSF58104 408 677 1.83E-66 T 25-04-2017 CLFO_RS14635 6f64492000fc3b324e65b3e202a58d7b 678 SUPERFAMILY SSF58104 348 375 1.83E-66 T 25-04-2017 CLFO_RS14635 6f64492000fc3b324e65b3e202a58d7b 678 SMART SM00283 402 677 8.3E-61 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS14635 6f64492000fc3b324e65b3e202a58d7b 678 SMART SM00304 318 373 8.4E-7 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS14635 6f64492000fc3b324e65b3e202a58d7b 678 Pfam PF00672 HAMP domain 300 369 1.4E-9 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS14635 6f64492000fc3b324e65b3e202a58d7b 678 Gene3D G3DSA:3.30.450.20 176 294 1.6E-11 T 25-04-2017 CLFO_RS14635 6f64492000fc3b324e65b3e202a58d7b 678 Gene3D G3DSA:1.10.287.950 417 635 1.3E-47 T 25-04-2017 CLFO_RS14635 6f64492000fc3b324e65b3e202a58d7b 678 Pfam PF17203 Single cache domain 3 194 293 2.3E-10 T 25-04-2017 IPR033463 Single cache domain 3 CLFO_RS14635 6f64492000fc3b324e65b3e202a58d7b 678 SUPERFAMILY SSF103190 176 294 1.45E-15 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS20150 b82b081dc39a9b82ea409b8b6d77fc7b 786 Pfam PF00395 S-layer homology domain 664 706 0.0016 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 464 39.6 T 25-04-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 Pfam PF09190 DALR domain 353 413 5.7E-17 T 25-04-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 SMART SM00840 353 415 2.5E-20 T 25-04-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 SUPERFAMILY SSF47323 314 463 1.96E-36 T 25-04-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 Gene3D G3DSA:1.20.120.640 305 406 8.6E-25 T 25-04-2017 CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 310 1.8E-134 T 25-04-2017 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 SUPERFAMILY SSF52374 2 310 7.93E-102 T 25-04-2017 CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 463 2.8E-186 T 25-04-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 2.6E-30 T 25-04-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 189 207 2.6E-30 T 25-04-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 220 241 2.6E-30 T 25-04-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 2.6E-30 T 25-04-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CLFO_RS19820 94ead0cd0bb79a07cf93888db8646c58 464 Gene3D G3DSA:3.40.50.620 18 303 3.7E-110 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS13800 0981f6e161a1dcc53540eda6c6e6d3d9 134 Pfam PF03551 Transcriptional regulator PadR-like family 30 104 3.5E-17 T 25-04-2017 IPR005149 Transcription regulator PadR, N-terminal CLFO_RS13800 0981f6e161a1dcc53540eda6c6e6d3d9 134 Gene3D G3DSA:1.10.10.10 23 127 1.2E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13800 0981f6e161a1dcc53540eda6c6e6d3d9 134 SUPERFAMILY SSF46785 25 116 2.02E-20 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03605 3e962b2a906abb01c7c167ce6d821395 303 Pfam PF01545 Cation efflux family 19 210 6.6E-42 T 25-04-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLFO_RS03605 3e962b2a906abb01c7c167ce6d821395 303 SUPERFAMILY SSF160240 219 293 6.41E-17 T 25-04-2017 CLFO_RS03605 3e962b2a906abb01c7c167ce6d821395 303 Gene3D G3DSA:1.20.1510.10 16 210 1.2E-45 T 25-04-2017 IPR027469 Cation efflux protein transmembrane domain CLFO_RS03605 3e962b2a906abb01c7c167ce6d821395 303 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 293 6.2E-69 T 25-04-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLFO_RS03605 3e962b2a906abb01c7c167ce6d821395 303 Pfam PF16916 Dimerisation domain of Zinc Transporter 219 292 7.3E-19 T 25-04-2017 IPR027470 Cation efflux protein, cytoplasmic domain CLFO_RS03605 3e962b2a906abb01c7c167ce6d821395 303 SUPERFAMILY SSF161111 12 212 2.48E-52 T 25-04-2017 CLFO_RS03605 3e962b2a906abb01c7c167ce6d821395 303 Gene3D G3DSA:3.30.70.1350 216 294 1.0E-19 T 25-04-2017 IPR027470 Cation efflux protein, cytoplasmic domain CLFO_RS20165 cdc4d4a0bc34ce5f56b3f3177395a646 493 Pfam PF08486 Stage II sporulation protein 33 133 5.5E-8 T 25-04-2017 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal CLFO_RS20165 cdc4d4a0bc34ce5f56b3f3177395a646 493 Gene3D G3DSA:3.40.630.40 312 489 4.3E-52 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS20165 cdc4d4a0bc34ce5f56b3f3177395a646 493 SMART SM00646 375 485 2.4E-28 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS20165 cdc4d4a0bc34ce5f56b3f3177395a646 493 SUPERFAMILY SSF53187 312 490 1.32E-47 T 25-04-2017 CLFO_RS20165 cdc4d4a0bc34ce5f56b3f3177395a646 493 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 35 299 1.9E-40 T 25-04-2017 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 CLFO_RS20165 cdc4d4a0bc34ce5f56b3f3177395a646 493 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 315 485 8.6E-46 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS09895 db70e671b584aacab05a0124fd53cfc9 310 Gene3D G3DSA:2.40.30.10 64 152 5.3E-10 T 25-04-2017 CLFO_RS09895 db70e671b584aacab05a0124fd53cfc9 310 Gene3D G3DSA:3.10.20.30 257 306 8.3E-7 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS09895 db70e671b584aacab05a0124fd53cfc9 310 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 282 290 - T 25-04-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CLFO_RS09895 db70e671b584aacab05a0124fd53cfc9 310 SUPERFAMILY SSF54292 272 307 6.05E-7 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS09895 db70e671b584aacab05a0124fd53cfc9 310 SUPERFAMILY SSF63380 64 158 1.34E-11 T 25-04-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLFO_RS14820 2c76b4e5ccd0f7d8759c71cb8b4ee517 267 SUPERFAMILY SSF51717 1 260 3.01E-76 T 25-04-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS14820 2c76b4e5ccd0f7d8759c71cb8b4ee517 267 Gene3D G3DSA:3.20.20.20 1 260 8.7E-79 T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS14820 2c76b4e5ccd0f7d8759c71cb8b4ee517 267 Pfam PF00809 Pterin binding enzyme 6 226 6.3E-21 T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 SMART SM00091 128 194 1.5E-6 T 25-04-2017 IPR000014 PAS domain CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 SMART SM00267 242 413 5.0E-57 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 Pfam PF00563 EAL domain 429 664 3.2E-70 T 25-04-2017 IPR001633 EAL domain CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 248 4.6E-20 T 25-04-2017 IPR000014 PAS domain CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 SMART SM00052 423 669 1.8E-98 T 25-04-2017 IPR001633 EAL domain CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 Gene3D G3DSA:3.30.450.20 116 240 1.0E-18 T 25-04-2017 CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 SUPERFAMILY SSF55785 115 240 5.41E-18 T 25-04-2017 IPR000014 PAS domain CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 SUPERFAMILY SSF141868 429 677 2.75E-84 T 25-04-2017 IPR001633 EAL domain CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 408 5.7E-48 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 SUPERFAMILY SSF55073 258 415 1.33E-44 T 25-04-2017 IPR029787 Nucleotide cyclase CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 Pfam PF13426 PAS domain 144 241 6.1E-11 T 25-04-2017 IPR000014 PAS domain CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 Gene3D G3DSA:3.20.20.450 426 676 2.7E-91 T 25-04-2017 IPR001633 EAL domain CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 411 2.1E-41 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS21145 b8b0daf01d7294f8aa394e907f8e02db 685 Gene3D G3DSA:3.30.70.270 255 419 1.1E-49 T 25-04-2017 CLFO_RS00705 3f208ebba18162ebe859a92f8c0c4a36 268 Pfam PF01061 ABC-2 type transporter 18 228 1.3E-23 T 25-04-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CLFO_RS04825 f7bbbdc878dc4156aaad64054b10f1ac 276 Gene3D G3DSA:3.40.47.10 1 70 8.5E-9 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04825 f7bbbdc878dc4156aaad64054b10f1ac 276 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 16 139 8.4E-12 T 25-04-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04825 f7bbbdc878dc4156aaad64054b10f1ac 276 SUPERFAMILY SSF53901 1 70 3.31E-6 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 Gene3D G3DSA:3.50.30.10 128 250 2.1E-47 T 25-04-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 287 306 4.9E-30 T 25-04-2017 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 494 506 4.9E-30 T 25-04-2017 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 458 473 4.9E-30 T 25-04-2017 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 441 456 4.9E-30 T 25-04-2017 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 Gene3D G3DSA:3.20.20.60 251 561 1.1E-117 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 Pfam PF05524 PEP-utilising enzyme, N-terminal 3 120 1.5E-33 T 25-04-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 PIRSF PIRSF000732 1 563 1.0E-230 T 25-04-2017 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 Pfam PF00391 PEP-utilising enzyme, mobile domain 146 219 9.8E-27 T 25-04-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 SUPERFAMILY SSF52009 119 238 1.7E-39 T 25-04-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 SUPERFAMILY SSF47831 23 137 1.44E-33 T 25-04-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 178 189 - T 25-04-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 Gene3D G3DSA:1.10.274.10 22 127 5.7E-36 T 25-04-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 SUPERFAMILY SSF51621 243 542 1.39E-111 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 3 559 1.0E-227 T 25-04-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CLFO_RS06830 5110af4da3de2fdcd46e7ebfd19216f8 563 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 246 534 7.3E-124 T 25-04-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 570 586 4.5E-15 T 25-04-2017 CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 4.5E-15 T 25-04-2017 CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 711 729 4.5E-15 T 25-04-2017 CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 651 670 4.5E-15 T 25-04-2017 CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 681 700 4.5E-15 T 25-04-2017 CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 SUPERFAMILY SSF52540 311 547 1.02E-13 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 SUPERFAMILY SSF52540 32 105 1.02E-13 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 654 756 3.0E-10 T 25-04-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 Gene3D G3DSA:3.30.230.10 567 760 6.4E-30 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 Gene3D G3DSA:3.40.50.300 32 88 1.7E-9 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 Gene3D G3DSA:3.40.50.300 302 401 1.7E-9 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 Pfam PF13654 AAA domain 26 544 5.7E-196 T 25-04-2017 CLFO_RS17810 23ca226e49dc3987df45762b661b588a 796 SUPERFAMILY SSF54211 568 762 9.1E-36 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 199.255 T 25-04-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 Pfam PF00871 Acetokinase family 2 390 2.5E-168 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 SUPERFAMILY SSF53067 159 395 1.24E-94 T 25-04-2017 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 25-04-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 25-04-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 PRINTS PR00471 Acetate kinase family signature 204 225 9.1E-47 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 PRINTS PR00471 Acetate kinase family signature 323 339 9.1E-47 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 PRINTS PR00471 Acetate kinase family signature 3 14 9.1E-47 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 PRINTS PR00471 Acetate kinase family signature 377 389 9.1E-47 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 PRINTS PR00471 Acetate kinase family signature 174 187 9.1E-47 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 PRINTS PR00471 Acetate kinase family signature 301 314 9.1E-47 T 25-04-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 PIRSF PIRSF000722 1 397 5.5E-160 T 25-04-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 Gene3D G3DSA:3.30.420.40 1 205 9.0E-12 T 25-04-2017 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 SUPERFAMILY SSF53067 1 197 1.94E-74 T 25-04-2017 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 TIGRFAM TIGR00016 ackA: acetate kinase 1 395 1.5E-168 T 25-04-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CLFO_RS11310 5458ea503ec9f8d9d0ad429261b168d7 397 Gene3D G3DSA:3.30.420.40 206 395 3.6E-80 T 25-04-2017 CLFO_RS16165 1c01fb8f0d759b230b811b4f5cdeed9a 571 Pfam PF00664 ABC transporter transmembrane region 17 285 9.2E-47 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS16165 1c01fb8f0d759b230b811b4f5cdeed9a 571 SUPERFAMILY SSF52540 325 564 1.2E-74 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16165 1c01fb8f0d759b230b811b4f5cdeed9a 571 ProSitePatterns PS00211 ABC transporters family signature. 466 480 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS16165 1c01fb8f0d759b230b811b4f5cdeed9a 571 SUPERFAMILY SSF90123 2 311 1.57E-69 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS16165 1c01fb8f0d759b230b811b4f5cdeed9a 571 Gene3D G3DSA:1.20.1560.10 1 311 1.3E-63 T 25-04-2017 CLFO_RS16165 1c01fb8f0d759b230b811b4f5cdeed9a 571 SMART SM00382 355 540 2.1E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS16165 1c01fb8f0d759b230b811b4f5cdeed9a 571 Gene3D G3DSA:3.40.50.300 330 559 3.7E-68 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16165 1c01fb8f0d759b230b811b4f5cdeed9a 571 Pfam PF00005 ABC transporter 346 492 4.3E-32 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS05910 d7aef3e77a693879f46379e505a555ff 379 SUPERFAMILY SSF109604 218 315 2.15E-14 T 25-04-2017 CLFO_RS05910 d7aef3e77a693879f46379e505a555ff 379 SUPERFAMILY SSF53448 7 201 3.38E-25 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS05910 d7aef3e77a693879f46379e505a555ff 379 SMART SM00471 218 326 1.4E-5 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS05910 d7aef3e77a693879f46379e505a555ff 379 Pfam PF01966 HD domain 223 314 3.7E-9 T 25-04-2017 IPR006674 HD domain CLFO_RS05910 d7aef3e77a693879f46379e505a555ff 379 Pfam PF12804 MobA-like NTP transferase domain 8 167 3.4E-28 T 25-04-2017 IPR025877 MobA-like NTP transferase CLFO_RS05910 d7aef3e77a693879f46379e505a555ff 379 Gene3D G3DSA:3.90.550.10 2 196 2.6E-25 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS05910 d7aef3e77a693879f46379e505a555ff 379 Gene3D G3DSA:1.10.3210.10 212 330 7.5E-10 T 25-04-2017 IPR006674 HD domain CLFO_RS05500 8dd4f812ba7cd2e66f0e988fa2fb2dcb 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 25-04-2017 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS05500 8dd4f812ba7cd2e66f0e988fa2fb2dcb 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.3E-21 T 25-04-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLFO_RS05500 8dd4f812ba7cd2e66f0e988fa2fb2dcb 64 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.3E-21 T 25-04-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLFO_RS05500 8dd4f812ba7cd2e66f0e988fa2fb2dcb 64 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.3E-21 T 25-04-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLFO_RS05500 8dd4f812ba7cd2e66f0e988fa2fb2dcb 64 Pfam PF01632 Ribosomal protein L35 2 60 4.3E-24 T 25-04-2017 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS05500 8dd4f812ba7cd2e66f0e988fa2fb2dcb 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 19.048 T 25-04-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLFO_RS05500 8dd4f812ba7cd2e66f0e988fa2fb2dcb 64 SUPERFAMILY SSF143034 2 62 8.89E-20 T 25-04-2017 CLFO_RS05500 8dd4f812ba7cd2e66f0e988fa2fb2dcb 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 1.2E-23 T 25-04-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CLFO_RS20870 ef864a440fde3c334052a5836d27acd3 365 Pfam PF13786 Domain of unknown function (DUF4179) 74 157 8.7E-9 T 25-04-2017 IPR025436 Domain of unknown function DUF4179 CLFO_RS20870 ef864a440fde3c334052a5836d27acd3 365 Gene3D G3DSA:2.60.40.1630 116 251 2.0E-7 T 25-04-2017 CLFO_RS21085 13070384bc3d76b35cfac4b1994d760a 427 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 427 198.476 T 25-04-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CLFO_RS21085 13070384bc3d76b35cfac4b1994d760a 427 Gene3D G3DSA:3.90.170.10 265 423 3.8E-71 T 25-04-2017 CLFO_RS21085 13070384bc3d76b35cfac4b1994d760a 427 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 25-04-2017 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CLFO_RS21085 13070384bc3d76b35cfac4b1994d760a 427 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 422 1.3E-177 T 25-04-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CLFO_RS21085 13070384bc3d76b35cfac4b1994d760a 427 Pfam PF00709 Adenylosuccinate synthetase 4 421 3.9E-182 T 25-04-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CLFO_RS21085 13070384bc3d76b35cfac4b1994d760a 427 Gene3D G3DSA:3.40.440.10 2 93 3.0E-73 T 25-04-2017 CLFO_RS21085 13070384bc3d76b35cfac4b1994d760a 427 Gene3D G3DSA:3.40.440.10 195 264 3.0E-73 T 25-04-2017 CLFO_RS21085 13070384bc3d76b35cfac4b1994d760a 427 SUPERFAMILY SSF52540 1 426 6.16E-173 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21085 13070384bc3d76b35cfac4b1994d760a 427 Gene3D G3DSA:1.10.300.10 100 194 1.2E-33 T 25-04-2017 CLFO_RS21085 13070384bc3d76b35cfac4b1994d760a 427 SMART SM00788 3 422 3.8E-274 T 25-04-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CLFO_RS21085 13070384bc3d76b35cfac4b1994d760a 427 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 25-04-2017 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CLFO_RS12465 9dc2ed21652c7a903a70eee851a2d551 147 Gene3D G3DSA:1.10.1510.10 1 90 3.2E-31 T 25-04-2017 CLFO_RS12465 9dc2ed21652c7a903a70eee851a2d551 147 SUPERFAMILY SSF89095 1 147 1.41E-43 T 25-04-2017 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CLFO_RS12465 9dc2ed21652c7a903a70eee851a2d551 147 Gene3D G3DSA:1.10.10.410 91 147 2.6E-25 T 25-04-2017 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CLFO_RS12465 9dc2ed21652c7a903a70eee851a2d551 147 Pfam PF09424 Yqey-like protein 4 146 2.2E-53 T 25-04-2017 IPR019004 Uncharacterised domain YOR215C, mitochondrial CLFO_RS01740 c4fba5027aba9e26389f1e75c9224660 508 SUPERFAMILY SSF52540 3 227 4.11E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01740 c4fba5027aba9e26389f1e75c9224660 508 Gene3D G3DSA:3.40.50.300 268 497 3.7E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01740 c4fba5027aba9e26389f1e75c9224660 508 Gene3D G3DSA:3.40.50.300 3 237 1.1E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01740 c4fba5027aba9e26389f1e75c9224660 508 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS01740 c4fba5027aba9e26389f1e75c9224660 508 SUPERFAMILY SSF52540 260 481 3.88E-46 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01740 c4fba5027aba9e26389f1e75c9224660 508 SMART SM00382 29 218 8.7E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS01740 c4fba5027aba9e26389f1e75c9224660 508 SMART SM00382 280 475 1.8E-7 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS01740 c4fba5027aba9e26389f1e75c9224660 508 Pfam PF00005 ABC transporter 272 426 2.1E-20 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS01740 c4fba5027aba9e26389f1e75c9224660 508 Pfam PF00005 ABC transporter 20 170 1.2E-30 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS06425 13c654a7397d19181cef8efa5a25dc32 422 Pfam PF00512 His Kinase A (phospho-acceptor) domain 200 264 4.1E-14 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06425 13c654a7397d19181cef8efa5a25dc32 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 420 2.2E-21 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06425 13c654a7397d19181cef8efa5a25dc32 422 SUPERFAMILY SSF55874 256 420 5.76E-41 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06425 13c654a7397d19181cef8efa5a25dc32 422 Gene3D G3DSA:3.30.565.10 252 420 8.9E-42 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06425 13c654a7397d19181cef8efa5a25dc32 422 SUPERFAMILY SSF47384 187 265 7.65E-17 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06425 13c654a7397d19181cef8efa5a25dc32 422 Gene3D G3DSA:1.10.287.130 192 251 1.8E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06425 13c654a7397d19181cef8efa5a25dc32 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 362 2.2E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06425 13c654a7397d19181cef8efa5a25dc32 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 376 2.2E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06425 13c654a7397d19181cef8efa5a25dc32 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 2.2E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06425 13c654a7397d19181cef8efa5a25dc32 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 420 2.2E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06425 13c654a7397d19181cef8efa5a25dc32 422 SMART SM00387 311 422 7.4E-31 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06425 13c654a7397d19181cef8efa5a25dc32 422 SMART SM00388 199 266 4.4E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06875 bbd9be9a40a1bbcd536c5fba6374d171 227 SUPERFAMILY SSF46894 130 225 1.16E-29 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS06875 bbd9be9a40a1bbcd536c5fba6374d171 227 SMART SM00448 6 116 4.8E-45 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS06875 bbd9be9a40a1bbcd536c5fba6374d171 227 Pfam PF00072 Response regulator receiver domain 9 117 7.6E-31 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS06875 bbd9be9a40a1bbcd536c5fba6374d171 227 Gene3D G3DSA:3.40.50.2300 6 124 1.1E-41 T 25-04-2017 CLFO_RS06875 bbd9be9a40a1bbcd536c5fba6374d171 227 SUPERFAMILY SSF52172 5 126 1.27E-41 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS06875 bbd9be9a40a1bbcd536c5fba6374d171 227 Gene3D G3DSA:1.10.10.10 130 226 4.7E-33 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06875 bbd9be9a40a1bbcd536c5fba6374d171 227 SMART SM00862 150 223 6.2E-28 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS06875 bbd9be9a40a1bbcd536c5fba6374d171 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 223 5.4E-26 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS07245 25aefd643fea5068b468fabe1191a117 214 SMART SM00448 4 117 7.1E-32 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS07245 25aefd643fea5068b468fabe1191a117 214 Gene3D G3DSA:3.40.50.2300 1 149 1.2E-42 T 25-04-2017 CLFO_RS07245 25aefd643fea5068b468fabe1191a117 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.2E-15 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS07245 25aefd643fea5068b468fabe1191a117 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.2E-15 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS07245 25aefd643fea5068b468fabe1191a117 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.2E-15 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS07245 25aefd643fea5068b468fabe1191a117 214 SUPERFAMILY SSF52172 3 133 1.37E-36 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS07245 25aefd643fea5068b468fabe1191a117 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 8.5E-23 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS07245 25aefd643fea5068b468fabe1191a117 214 SUPERFAMILY SSF46894 148 211 1.12E-23 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS07245 25aefd643fea5068b468fabe1191a117 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS07245 25aefd643fea5068b468fabe1191a117 214 SMART SM00421 149 206 2.3E-26 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS07245 25aefd643fea5068b468fabe1191a117 214 Gene3D G3DSA:1.10.10.10 150 211 2.3E-29 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS07245 25aefd643fea5068b468fabe1191a117 214 Pfam PF00072 Response regulator receiver domain 6 118 3.5E-32 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 Pfam PF00391 PEP-utilising enzyme, mobile domain 421 502 1.6E-26 T 25-04-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 Gene3D G3DSA:1.20.80.30 111 197 1.7E-35 T 25-04-2017 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 SUPERFAMILY SSF56059 2 378 1.29E-146 T 25-04-2017 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 302 355 1.8E-10 T 25-04-2017 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 294 4.1E-45 T 25-04-2017 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 Gene3D G3DSA:1.10.189.10 341 400 1.1E-27 T 25-04-2017 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 Gene3D G3DSA:3.30.470.20 243 340 7.9E-40 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 Gene3D G3DSA:3.20.20.60 531 871 2.1E-143 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 2 870 0.0 T 25-04-2017 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 PIRSF PIRSF000853 1 874 0.0 T 25-04-2017 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 SUPERFAMILY SSF51621 511 871 2.17E-133 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 Gene3D G3DSA:3.30.1490.20 3 110 2.0E-59 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 Gene3D G3DSA:3.30.1490.20 199 242 2.0E-59 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 SUPERFAMILY SSF52009 379 507 8.63E-36 T 25-04-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 760 778 - T 25-04-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 Gene3D G3DSA:3.50.30.10 401 505 9.6E-39 T 25-04-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 518 868 7.9E-95 T 25-04-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CLFO_RS12365 d19a04a821d8e51620e18a7192e73bf1 874 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 449 460 - T 25-04-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 SUPERFAMILY SSF88946 17 111 3.61E-24 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 Pfam PF04542 Sigma-70 region 2 55 111 8.8E-13 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 PRINTS PR00046 Major sigma-70 factor signature 66 79 1.8E-6 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 PRINTS PR00046 Major sigma-70 factor signature 231 246 1.8E-6 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 PRINTS PR00046 Major sigma-70 factor signature 214 226 1.8E-6 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 PRINTS PR00046 Major sigma-70 factor signature 246 257 1.8E-6 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 Pfam PF04539 Sigma-70 region 3 121 184 3.7E-11 T 25-04-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 Pfam PF04545 Sigma-70, region 4 210 259 2.3E-12 T 25-04-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 231 257 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 260 2.0E-26 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 Gene3D G3DSA:1.10.10.10 110 165 8.4E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 SUPERFAMILY SSF88659 115 191 2.88E-16 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 SUPERFAMILY SSF88659 177 262 8.04E-14 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 37 261 9.6E-79 T 25-04-2017 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 Gene3D G3DSA:1.10.10.10 205 262 3.9E-9 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS00050 eeba7ed270e4a93f940b9345952292b2 265 Gene3D G3DSA:1.10.601.10 15 109 1.3E-17 T 25-04-2017 CLFO_RS02660 e896b242cda6559cb48037ffb0080e36 1909 SUPERFAMILY SSF55383 1793 1845 2.88E-13 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02660 e896b242cda6559cb48037ffb0080e36 1909 SUPERFAMILY SSF55383 1833 1901 2.88E-12 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02660 e896b242cda6559cb48037ffb0080e36 1909 Gene3D G3DSA:3.30.457.10 1793 1835 1.7E-12 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02660 e896b242cda6559cb48037ffb0080e36 1909 Gene3D G3DSA:3.30.457.10 1836 1896 1.2E-13 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02660 e896b242cda6559cb48037ffb0080e36 1909 Gene3D G3DSA:1.50.10.20 1112 1265 5.1E-6 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS02660 e896b242cda6559cb48037ffb0080e36 1909 SUPERFAMILY SSF48239 1083 1268 1.15E-8 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS02660 e896b242cda6559cb48037ffb0080e36 1909 SUPERFAMILY SSF48239 645 818 1.96E-5 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS02660 e896b242cda6559cb48037ffb0080e36 1909 Pfam PF07833 Copper amine oxidase N-terminal domain 1793 1850 8.7E-15 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02660 e896b242cda6559cb48037ffb0080e36 1909 Pfam PF07833 Copper amine oxidase N-terminal domain 1839 1907 1.2E-13 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02660 e896b242cda6559cb48037ffb0080e36 1909 Pfam PF14478 Domain of unknown function (DUF4430) 1493 1569 1.0E-14 T 25-04-2017 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 CLFO_RS02660 e896b242cda6559cb48037ffb0080e36 1909 Pfam PF07705 CARDB 79 159 8.7E-9 T 25-04-2017 IPR011635 CARDB domain CLFO_RS01835 e3ec9b9e365092562f0dc1be910167ad 148 SUPERFAMILY SSF55729 4 148 9.49E-35 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS01835 e3ec9b9e365092562f0dc1be910167ad 148 Pfam PF00583 Acetyltransferase (GNAT) family 51 124 8.9E-16 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS01835 e3ec9b9e365092562f0dc1be910167ad 148 Gene3D G3DSA:3.40.630.30 1 148 2.1E-38 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS01835 e3ec9b9e365092562f0dc1be910167ad 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 144 4.0E-43 T 25-04-2017 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 CLFO_RS05195 cbf3b492da5e7be36b284b7995d2a003 565 Gene3D G3DSA:3.40.50.300 266 307 4.9E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05195 cbf3b492da5e7be36b284b7995d2a003 565 Gene3D G3DSA:3.10.20.30 12 68 3.4E-4 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS05195 cbf3b492da5e7be36b284b7995d2a003 565 Gene3D G3DSA:3.40.50.300 308 512 1.3E-44 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05195 cbf3b492da5e7be36b284b7995d2a003 565 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 296 493 1.9E-15 T 25-04-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 CLFO_RS05195 cbf3b492da5e7be36b284b7995d2a003 565 SMART SM00382 292 453 5.2E-6 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS05195 cbf3b492da5e7be36b284b7995d2a003 565 SUPERFAMILY SSF52540 293 538 1.04E-23 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05195 cbf3b492da5e7be36b284b7995d2a003 565 SUPERFAMILY SSF81271 12 68 3.17E-5 T 25-04-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CLFO_RS05195 cbf3b492da5e7be36b284b7995d2a003 565 Gene3D G3DSA:3.30.980.10 75 161 1.0E-18 T 25-04-2017 CLFO_RS05195 cbf3b492da5e7be36b284b7995d2a003 565 SUPERFAMILY SSF55186 75 242 2.22E-31 T 25-04-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 SMART SM00433 41 650 2.5E-98 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 SMART SM00387 34 182 7.6E-6 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 ProSitePatterns PS00177 DNA topoisomerase II signature. 438 446 - T 25-04-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 Gene3D G3DSA:3.30.565.10 21 219 7.6E-52 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR01159 DNA gyrase subunit B signature 373 387 4.9E-19 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR01159 DNA gyrase subunit B signature 610 622 4.9E-19 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR01159 DNA gyrase subunit B signature 226 248 4.9E-19 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR01159 DNA gyrase subunit B signature 387 407 4.9E-19 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR01159 DNA gyrase subunit B signature 9 19 4.9E-19 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR01159 DNA gyrase subunit B signature 486 495 4.9E-19 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR01159 DNA gyrase subunit B signature 626 642 4.9E-19 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR01159 DNA gyrase subunit B signature 202 215 4.9E-19 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR01159 DNA gyrase subunit B signature 256 274 4.9E-19 T 25-04-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 SUPERFAMILY SSF54211 227 402 9.67E-21 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 181 1.1E-6 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR00418 DNA topoisomerase II family signature 510 526 7.4E-35 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR00418 DNA topoisomerase II family signature 38 53 7.4E-35 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR00418 DNA topoisomerase II family signature 589 605 7.4E-35 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR00418 DNA topoisomerase II family signature 436 450 7.4E-35 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR00418 DNA topoisomerase II family signature 548 560 7.4E-35 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR00418 DNA topoisomerase II family signature 528 545 7.4E-35 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR00418 DNA topoisomerase II family signature 73 86 7.4E-35 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 PRINTS PR00418 DNA topoisomerase II family signature 119 133 7.4E-35 T 25-04-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 Pfam PF01751 Toprim domain 435 554 5.1E-19 T 25-04-2017 IPR006171 Toprim domain CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 SUPERFAMILY SSF56719 417 650 3.4E-64 T 25-04-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 Gene3D G3DSA:3.30.230.10 226 402 3.1E-23 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 Pfam PF00204 DNA gyrase B 227 399 1.6E-27 T 25-04-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 Gene3D G3DSA:3.40.50.670 421 637 4.9E-70 T 25-04-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 585 645 1.1E-21 T 25-04-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CLFO_RS09955 bca8b00a7381686ce1a189e1fde9de24 659 SUPERFAMILY SSF55874 9 224 3.56E-42 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS21035 b582d7bf791f6baddda5c60d9aa693df 589 Pfam PF00005 ABC transporter 364 513 5.4E-27 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS21035 b582d7bf791f6baddda5c60d9aa693df 589 SUPERFAMILY SSF90123 20 318 8.76E-22 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS21035 b582d7bf791f6baddda5c60d9aa693df 589 Gene3D G3DSA:3.40.50.300 348 585 1.7E-62 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21035 b582d7bf791f6baddda5c60d9aa693df 589 Gene3D G3DSA:1.20.1560.10 29 319 5.8E-15 T 25-04-2017 CLFO_RS21035 b582d7bf791f6baddda5c60d9aa693df 589 SUPERFAMILY SSF52540 338 584 7.74E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21035 b582d7bf791f6baddda5c60d9aa693df 589 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS21035 b582d7bf791f6baddda5c60d9aa693df 589 SMART SM00382 373 559 3.8E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS01490 39a8cba1db3b49b38e85ebd1ef2d57b6 149 SUPERFAMILY SSF55729 1 140 2.84E-19 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS01490 39a8cba1db3b49b38e85ebd1ef2d57b6 149 Pfam PF13302 Acetyltransferase (GNAT) domain 5 135 1.4E-13 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS01490 39a8cba1db3b49b38e85ebd1ef2d57b6 149 Gene3D G3DSA:3.40.630.30 3 139 3.6E-22 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS11315 df4b64fccf947a656cbef98f6348e288 423 SUPERFAMILY SSF52374 198 247 5.04E-19 T 25-04-2017 CLFO_RS11315 df4b64fccf947a656cbef98f6348e288 423 SUPERFAMILY SSF52374 1 125 5.04E-19 T 25-04-2017 CLFO_RS11315 df4b64fccf947a656cbef98f6348e288 423 Gene3D G3DSA:3.40.50.620 1 253 1.9E-80 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS11315 df4b64fccf947a656cbef98f6348e288 423 Pfam PF05636 HIGH Nucleotidyl Transferase 1 406 2.7E-140 T 25-04-2017 IPR008513 Uncharacterised protein family UPF0348 CLFO_RS11315 df4b64fccf947a656cbef98f6348e288 423 Hamap MF_01539 UPF0348 protein . 2 413 36.122 T 25-04-2017 IPR008513 Uncharacterised protein family UPF0348 CLFO_RS09890 9ff08065b1dd77d6b4379cddfe42a051 370 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 246 1.8E-60 T 25-04-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CLFO_RS09890 9ff08065b1dd77d6b4379cddfe42a051 370 Gene3D G3DSA:2.60.410.10 267 354 5.8E-14 T 25-04-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLFO_RS09890 9ff08065b1dd77d6b4379cddfe42a051 370 SUPERFAMILY SSF56601 4 264 1.03E-65 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS09890 9ff08065b1dd77d6b4379cddfe42a051 370 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 267 353 2.9E-12 T 25-04-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLFO_RS09890 9ff08065b1dd77d6b4379cddfe42a051 370 Gene3D G3DSA:3.40.710.10 9 262 4.6E-85 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS09890 9ff08065b1dd77d6b4379cddfe42a051 370 SMART SM00936 264 354 3.8E-12 T 25-04-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLFO_RS09890 9ff08065b1dd77d6b4379cddfe42a051 370 SUPERFAMILY SSF69189 266 354 4.51E-13 T 25-04-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CLFO_RS09890 9ff08065b1dd77d6b4379cddfe42a051 370 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 105 122 2.6E-14 T 25-04-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLFO_RS09890 9ff08065b1dd77d6b4379cddfe42a051 370 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 57 68 2.6E-14 T 25-04-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLFO_RS09890 9ff08065b1dd77d6b4379cddfe42a051 370 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 132 145 2.6E-14 T 25-04-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CLFO_RS15795 e2d77f2a2b40a290d7574674c5e933d8 274 SUPERFAMILY SSF51735 12 273 2.81E-69 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15795 e2d77f2a2b40a290d7574674c5e933d8 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 158 3.2E-6 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15795 e2d77f2a2b40a290d7574674c5e933d8 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 3.2E-6 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15795 e2d77f2a2b40a290d7574674c5e933d8 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 204 3.2E-6 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15795 e2d77f2a2b40a290d7574674c5e933d8 274 Gene3D G3DSA:3.40.50.720 8 273 1.6E-73 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15795 e2d77f2a2b40a290d7574674c5e933d8 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 223 3.4E-28 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15795 e2d77f2a2b40a290d7574674c5e933d8 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 3.4E-28 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15795 e2d77f2a2b40a290d7574674c5e933d8 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 255 3.4E-28 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15795 e2d77f2a2b40a290d7574674c5e933d8 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 3.4E-28 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15795 e2d77f2a2b40a290d7574674c5e933d8 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.4E-28 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15795 e2d77f2a2b40a290d7574674c5e933d8 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 204 3.4E-28 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS15795 e2d77f2a2b40a290d7574674c5e933d8 274 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 26 272 2.3E-51 T 25-04-2017 CLFO_RS11210 f308dc1861f6dbee1c01b69d871c18a9 247 Gene3D G3DSA:3.40.1280.10 1 162 1.0E-68 T 25-04-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLFO_RS11210 f308dc1861f6dbee1c01b69d871c18a9 247 Gene3D G3DSA:1.10.1270.20 163 243 1.8E-33 T 25-04-2017 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLFO_RS11210 f308dc1861f6dbee1c01b69d871c18a9 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 3.7E-65 T 25-04-2017 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLFO_RS11210 f308dc1861f6dbee1c01b69d871c18a9 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 1.2E-93 T 25-04-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLFO_RS11210 f308dc1861f6dbee1c01b69d871c18a9 247 SUPERFAMILY SSF75217 1 243 1.05E-98 T 25-04-2017 IPR029028 Alpha/beta knot methyltransferases CLFO_RS11210 f308dc1861f6dbee1c01b69d871c18a9 247 PIRSF PIRSF000386 1 245 4.2E-100 T 25-04-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLFO_RS11210 f308dc1861f6dbee1c01b69d871c18a9 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 106.964 T 25-04-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CLFO_RS17580 18c7a42727754e7d466a69d0c79918fc 141 Gene3D G3DSA:3.90.79.10 4 133 5.6E-28 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS17580 18c7a42727754e7d466a69d0c79918fc 141 SUPERFAMILY SSF55811 5 132 2.71E-26 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS17580 18c7a42727754e7d466a69d0c79918fc 141 Pfam PF00293 NUDIX domain 9 128 9.1E-18 T 25-04-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CLFO_RS18605 f96a71f833ef49fb5ea93222fc3cb17d 393 Gene3D G3DSA:3.90.1150.10 291 390 1.7E-24 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS18605 f96a71f833ef49fb5ea93222fc3cb17d 393 Pfam PF00155 Aminotransferase class I and II 35 384 1.1E-58 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS18605 f96a71f833ef49fb5ea93222fc3cb17d 393 Gene3D G3DSA:3.40.640.10 47 290 1.9E-61 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS18605 f96a71f833ef49fb5ea93222fc3cb17d 393 SUPERFAMILY SSF53383 21 390 7.71E-87 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS18605 f96a71f833ef49fb5ea93222fc3cb17d 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 241 254 - T 25-04-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CLFO_RS21125 9758ed4422cd14b68e894a706a734719 340 Pfam PF06081 Aromatic acid exporter family member 1 1 141 6.2E-27 T 25-04-2017 IPR010343 Aromatic acid exporter family member 1 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 SUPERFAMILY SSF53067 111 322 5.11E-45 T 25-04-2017 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 13 324 3.6E-137 T 25-04-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 10 342 63.937 T 25-04-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 Gene3D G3DSA:3.30.420.40 241 296 5.6E-4 T 25-04-2017 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 Pfam PF00814 Glycoprotease family 33 317 2.6E-103 T 25-04-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 13 317 1.4E-111 T 25-04-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 SUPERFAMILY SSF53067 12 132 2.33E-29 T 25-04-2017 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 85 105 2.3E-47 T 25-04-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 13 26 2.3E-47 T 25-04-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 140 152 2.3E-47 T 25-04-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 274 283 2.3E-47 T 25-04-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 163 184 2.3E-47 T 25-04-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 106 125 2.3E-47 T 25-04-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CLFO_RS01860 cbadecd0af65ea655008538d47c5854f 347 Gene3D G3DSA:3.30.420.40 11 168 4.5E-47 T 25-04-2017 CLFO_RS09550 0ddf6fdd4499396d40befba0b647d81f 561 Gene3D G3DSA:3.40.50.300 291 557 2.9E-96 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09550 0ddf6fdd4499396d40befba0b647d81f 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 41 146 8.8E-24 T 25-04-2017 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CLFO_RS09550 0ddf6fdd4499396d40befba0b647d81f 561 SUPERFAMILY SSF160246 3 142 6.54E-43 T 25-04-2017 CLFO_RS09550 0ddf6fdd4499396d40befba0b647d81f 561 SMART SM00382 313 436 2.2E-5 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS09550 0ddf6fdd4499396d40befba0b647d81f 561 Pfam PF00437 Type II/IV secretion system protein 187 452 2.9E-82 T 25-04-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CLFO_RS09550 0ddf6fdd4499396d40befba0b647d81f 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 380 394 - T 25-04-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CLFO_RS09550 0ddf6fdd4499396d40befba0b647d81f 561 SUPERFAMILY SSF52540 171 556 1.0E-102 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09550 0ddf6fdd4499396d40befba0b647d81f 561 Gene3D G3DSA:3.30.450.90 157 285 1.1E-51 T 25-04-2017 CLFO_RS07150 5267a608ddfd8f265a0e8cd2d01f65d3 514 Pfam PF01943 Polysaccharide biosynthesis protein 9 306 4.8E-29 T 25-04-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLFO_RS07150 5267a608ddfd8f265a0e8cd2d01f65d3 514 PIRSF PIRSF038958 1 513 2.1E-117 T 25-04-2017 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type CLFO_RS07150 5267a608ddfd8f265a0e8cd2d01f65d3 514 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 6 496 9.6E-114 T 25-04-2017 IPR014249 Sporulation stage V protein B CLFO_RS07150 5267a608ddfd8f265a0e8cd2d01f65d3 514 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 358 501 6.6E-25 T 25-04-2017 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLFO_RS16415 52556079b9458eb83d1ce9ca9e0479ec 472 Gene3D G3DSA:3.40.640.10 135 353 1.1E-48 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS16415 52556079b9458eb83d1ce9ca9e0479ec 472 Gene3D G3DSA:1.10.10.10 21 88 6.5E-20 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16415 52556079b9458eb83d1ce9ca9e0479ec 472 SUPERFAMILY SSF46785 22 97 8.62E-18 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16415 52556079b9458eb83d1ce9ca9e0479ec 472 SMART SM00345 28 87 7.8E-14 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS16415 52556079b9458eb83d1ce9ca9e0479ec 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 87 2.3E-12 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS16415 52556079b9458eb83d1ce9ca9e0479ec 472 SUPERFAMILY SSF53383 106 458 6.19E-59 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS16415 52556079b9458eb83d1ce9ca9e0479ec 472 Pfam PF00155 Aminotransferase class I and II 133 449 2.2E-21 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS12070 606d605ff93c907f9ef14614ee7d54bc 156 Pfam PF00364 Biotin-requiring enzyme 80 153 2.6E-23 T 25-04-2017 IPR000089 Biotin/lipoyl attachment CLFO_RS12070 606d605ff93c907f9ef14614ee7d54bc 156 Gene3D G3DSA:2.40.50.100 77 153 6.6E-30 T 25-04-2017 CLFO_RS12070 606d605ff93c907f9ef14614ee7d54bc 156 SUPERFAMILY SSF51230 77 153 8.11E-24 T 25-04-2017 IPR011053 Single hybrid motif CLFO_RS12070 606d605ff93c907f9ef14614ee7d54bc 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.0E-16 T 25-04-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CLFO_RS12070 606d605ff93c907f9ef14614ee7d54bc 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.0E-16 T 25-04-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CLFO_RS12070 606d605ff93c907f9ef14614ee7d54bc 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.0E-16 T 25-04-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CLFO_RS12070 606d605ff93c907f9ef14614ee7d54bc 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 1.0E-45 T 25-04-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CLFO_RS06505 c3a5c106d5195a346f5d4e60cf42131c 304 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 25-04-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CLFO_RS06505 c3a5c106d5195a346f5d4e60cf42131c 304 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 302 5.4E-133 T 25-04-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CLFO_RS06505 c3a5c106d5195a346f5d4e60cf42131c 304 Gene3D G3DSA:3.40.50.1100 42 142 1.7E-43 T 25-04-2017 CLFO_RS06505 c3a5c106d5195a346f5d4e60cf42131c 304 SUPERFAMILY SSF53686 2 302 1.24E-101 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS06505 c3a5c106d5195a346f5d4e60cf42131c 304 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 291 2.6E-71 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS06505 c3a5c106d5195a346f5d4e60cf42131c 304 Gene3D G3DSA:3.40.50.1100 1 41 9.3E-73 T 25-04-2017 CLFO_RS06505 c3a5c106d5195a346f5d4e60cf42131c 304 Gene3D G3DSA:3.40.50.1100 148 303 9.3E-73 T 25-04-2017 CLFO_RS06505 c3a5c106d5195a346f5d4e60cf42131c 304 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 302 9.9E-139 T 25-04-2017 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CLFO_RS04605 673363666d2c53726f4dcfaf078ba82e 184 Pfam PF02632 BioY family 33 173 3.3E-36 T 25-04-2017 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CLFO_RS04605 673363666d2c53726f4dcfaf078ba82e 184 PIRSF PIRSF016661 1 183 4.3E-45 T 25-04-2017 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 CLFO_RS14430 b8f161f53199beae470c180a6f7482a9 530 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 67 511 7.8E-148 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS14430 b8f161f53199beae470c180a6f7482a9 530 PIRSF PIRSF005690 36 527 4.1E-137 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS02855 55442777e19fe71fda802b3ad17011df 382 SUPERFAMILY SSF51569 1 280 1.56E-83 T 25-04-2017 CLFO_RS02855 55442777e19fe71fda802b3ad17011df 382 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 7 369 2.2E-148 T 25-04-2017 IPR013477 Homocitrate synthase NifV-type GO:0004410|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 CLFO_RS02855 55442777e19fe71fda802b3ad17011df 382 Pfam PF00682 HMGL-like 5 244 1.1E-76 T 25-04-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLFO_RS02855 55442777e19fe71fda802b3ad17011df 382 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 191 204 - T 25-04-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS02855 55442777e19fe71fda802b3ad17011df 382 Gene3D G3DSA:3.20.20.70 1 332 4.0E-110 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS02855 55442777e19fe71fda802b3ad17011df 382 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 25-04-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CLFO_RS15160 7e7978348b1724107221abd0605e8bab 640 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 162 626 1.7E-105 T 25-04-2017 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 CLFO_RS15160 7e7978348b1724107221abd0605e8bab 640 Gene3D G3DSA:3.50.50.60 570 630 2.4E-77 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS15160 7e7978348b1724107221abd0605e8bab 640 Gene3D G3DSA:3.50.50.60 154 400 2.4E-77 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS15160 7e7978348b1724107221abd0605e8bab 640 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 578 600 8.7E-6 T 25-04-2017 CLFO_RS15160 7e7978348b1724107221abd0605e8bab 640 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 182 8.7E-6 T 25-04-2017 CLFO_RS15160 7e7978348b1724107221abd0605e8bab 640 Gene3D G3DSA:3.90.700.10 423 565 6.3E-24 T 25-04-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS15160 7e7978348b1724107221abd0605e8bab 640 Pfam PF04205 FMN-binding domain 52 120 3.9E-12 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS15160 7e7978348b1724107221abd0605e8bab 640 SUPERFAMILY SSF56425 421 574 3.84E-26 T 25-04-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS15160 7e7978348b1724107221abd0605e8bab 640 SUPERFAMILY SSF51905 573 630 3.54E-55 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS15160 7e7978348b1724107221abd0605e8bab 640 SUPERFAMILY SSF51905 154 417 3.54E-55 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS15160 7e7978348b1724107221abd0605e8bab 640 SMART SM00900 49 122 9.5E-17 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS15160 7e7978348b1724107221abd0605e8bab 640 Pfam PF00890 FAD binding domain 162 613 3.1E-60 T 25-04-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CLFO_RS08565 03c43c53515fef867c1acc12fc762e04 193 Gene3D G3DSA:1.10.3210.10 6 190 1.6E-57 T 25-04-2017 IPR006674 HD domain CLFO_RS08565 03c43c53515fef867c1acc12fc762e04 193 Pfam PF01966 HD domain 21 131 8.1E-14 T 25-04-2017 IPR006674 HD domain CLFO_RS08565 03c43c53515fef867c1acc12fc762e04 193 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 13 184 1.0E-46 T 25-04-2017 IPR005249 Conserved hypothetical protein CHP00488 CLFO_RS08565 03c43c53515fef867c1acc12fc762e04 193 SMART SM00471 17 145 0.0059 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS08565 03c43c53515fef867c1acc12fc762e04 193 SUPERFAMILY SSF109604 3 189 2.7E-34 T 25-04-2017 CLFO_RS19710 ae17b1eec68cb8ec51eb464f97c6ae3e 106 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 8 105 1.7E-46 T 25-04-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19710 ae17b1eec68cb8ec51eb464f97c6ae3e 106 SUPERFAMILY SSF54999 9 106 9.68E-39 T 25-04-2017 IPR027486 Ribosomal protein S10 domain CLFO_RS19710 ae17b1eec68cb8ec51eb464f97c6ae3e 106 SMART SM01403 11 105 8.8E-61 T 25-04-2017 IPR027486 Ribosomal protein S10 domain CLFO_RS19710 ae17b1eec68cb8ec51eb464f97c6ae3e 106 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 7 106 28.233 T 25-04-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19710 ae17b1eec68cb8ec51eb464f97c6ae3e 106 PRINTS PR00971 Ribosomal protein S10 family signature 65 79 2.0E-19 T 25-04-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19710 ae17b1eec68cb8ec51eb464f97c6ae3e 106 PRINTS PR00971 Ribosomal protein S10 family signature 9 22 2.0E-19 T 25-04-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19710 ae17b1eec68cb8ec51eb464f97c6ae3e 106 PRINTS PR00971 Ribosomal protein S10 family signature 44 59 2.0E-19 T 25-04-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19710 ae17b1eec68cb8ec51eb464f97c6ae3e 106 ProSitePatterns PS00361 Ribosomal protein S10 signature. 33 48 - T 25-04-2017 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19710 ae17b1eec68cb8ec51eb464f97c6ae3e 106 Gene3D G3DSA:3.30.70.600 8 106 1.6E-45 T 25-04-2017 IPR027486 Ribosomal protein S10 domain CLFO_RS19710 ae17b1eec68cb8ec51eb464f97c6ae3e 106 Pfam PF00338 Ribosomal protein S10p/S20e 11 105 5.8E-37 T 25-04-2017 IPR027486 Ribosomal protein S10 domain CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 Hamap MF_00006 Argininosuccinate lyase [argH]. 7 458 39.714 T 25-04-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 5.8E-26 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 PRINTS PR00149 Fumarate lyase superfamily signature 107 125 5.8E-26 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 PRINTS PR00149 Fumarate lyase superfamily signature 152 170 5.8E-26 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 PRINTS PR00149 Fumarate lyase superfamily signature 236 263 5.8E-26 T 25-04-2017 IPR000362 Fumarate lyase family CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 Gene3D G3DSA:1.10.40.30 380 436 8.5E-28 T 25-04-2017 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 TIGRFAM TIGR00838 argH: argininosuccinate lyase 8 458 1.9E-170 T 25-04-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 PRINTS PR00145 Argininosuccinate lyase family signature 147 167 2.0E-58 T 25-04-2017 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 PRINTS PR00145 Argininosuccinate lyase family signature 236 260 2.0E-58 T 25-04-2017 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 PRINTS PR00145 Argininosuccinate lyase family signature 106 128 2.0E-58 T 25-04-2017 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 PRINTS PR00145 Argininosuccinate lyase family signature 280 296 2.0E-58 T 25-04-2017 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 PRINTS PR00145 Argininosuccinate lyase family signature 198 214 2.0E-58 T 25-04-2017 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 PRINTS PR00145 Argininosuccinate lyase family signature 315 334 2.0E-58 T 25-04-2017 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 Pfam PF00206 Lyase 11 303 2.1E-66 T 25-04-2017 IPR022761 Fumarate lyase, N-terminal CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 Gene3D G3DSA:1.20.200.10 112 379 1.8E-86 T 25-04-2017 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 SUPERFAMILY SSF48557 8 459 2.04E-134 T 25-04-2017 IPR008948 L-Aspartase-like GO:0003824 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 25-04-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 Pfam PF14698 Argininosuccinate lyase C-terminal 368 435 3.1E-23 T 25-04-2017 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CLFO_RS20395 d4f6d41402fa4aab67d5cd89b8ab8de7 465 Gene3D G3DSA:1.10.275.10 7 111 1.3E-38 T 25-04-2017 IPR024083 Fumarase/histidase, N-terminal CLFO_RS01550 6a559c8cd73fba2398f1e4b0504bcd38 276 Pfam PF01618 MotA/TolQ/ExbB proton channel family 109 223 1.2E-20 T 25-04-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CLFO_RS15355 cee92fc828aab03cc09ff679a57339d1 299 SUPERFAMILY SSF51735 1 280 2.47E-50 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15355 cee92fc828aab03cc09ff679a57339d1 299 Gene3D G3DSA:3.40.50.720 1 281 7.4E-41 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15355 cee92fc828aab03cc09ff679a57339d1 299 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 217 8.1E-26 T 25-04-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CLFO_RS00855 977b45e238242fdd6b3a765902db78b9 201 Gene3D G3DSA:3.40.50.880 1 200 2.0E-78 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS00855 977b45e238242fdd6b3a765902db78b9 201 SUPERFAMILY SSF52317 2 199 7.02E-59 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS00855 977b45e238242fdd6b3a765902db78b9 201 PIRSF PIRSF000495 1 201 7.6E-77 T 25-04-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CLFO_RS00855 977b45e238242fdd6b3a765902db78b9 201 Pfam PF00117 Glutamine amidotransferase class-I 4 196 3.1E-23 T 25-04-2017 IPR017926 Glutamine amidotransferase CLFO_RS00855 977b45e238242fdd6b3a765902db78b9 201 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 199 37.304 T 25-04-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CLFO_RS00855 977b45e238242fdd6b3a765902db78b9 201 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 198 2.5E-77 T 25-04-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CLFO_RS00370 0f9022bf16d57bed89425a2605763871 480 SUPERFAMILY SSF53383 4 383 1.31E-82 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS00370 0f9022bf16d57bed89425a2605763871 480 SUPERFAMILY SSF55904 340 476 2.22E-34 T 25-04-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLFO_RS00370 0f9022bf16d57bed89425a2605763871 480 Gene3D G3DSA:3.90.1150.10 319 384 6.1E-6 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS00370 0f9022bf16d57bed89425a2605763871 480 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 4 336 2.1E-71 T 25-04-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CLFO_RS00370 0f9022bf16d57bed89425a2605763871 480 Gene3D G3DSA:3.40.640.10 4 279 1.9E-101 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS00370 0f9022bf16d57bed89425a2605763871 480 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 372 467 3.4E-12 T 25-04-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLFO_RS00370 0f9022bf16d57bed89425a2605763871 480 Gene3D G3DSA:3.90.100.10 389 474 3.4E-25 T 25-04-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CLFO_RS04690 bda4a1dc163e499c9fbd38c4b73b39c7 101 SUPERFAMILY SSF54909 13 90 1.97E-13 T 25-04-2017 IPR011008 Dimeric alpha-beta barrel CLFO_RS04690 bda4a1dc163e499c9fbd38c4b73b39c7 101 Pfam PF03795 YCII-related domain 1 90 1.2E-9 T 25-04-2017 IPR005545 YCII-related CLFO_RS04690 bda4a1dc163e499c9fbd38c4b73b39c7 101 Gene3D G3DSA:3.30.70.1060 1 92 1.0E-21 T 25-04-2017 CLFO_RS15480 f5fcaba92ad4bc7338aaf764802d4454 247 SMART SM00257 79 124 1.0E-15 T 25-04-2017 IPR018392 LysM domain CLFO_RS15480 f5fcaba92ad4bc7338aaf764802d4454 247 SMART SM00257 16 61 5.8E-17 T 25-04-2017 IPR018392 LysM domain CLFO_RS15480 f5fcaba92ad4bc7338aaf764802d4454 247 SUPERFAMILY SSF54106 78 124 1.14E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS15480 f5fcaba92ad4bc7338aaf764802d4454 247 Pfam PF01476 LysM domain 80 124 1.5E-14 T 25-04-2017 IPR018392 LysM domain CLFO_RS15480 f5fcaba92ad4bc7338aaf764802d4454 247 Pfam PF01476 LysM domain 17 61 2.8E-16 T 25-04-2017 IPR018392 LysM domain CLFO_RS15480 f5fcaba92ad4bc7338aaf764802d4454 247 SUPERFAMILY SSF54106 15 61 3.79E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS15480 f5fcaba92ad4bc7338aaf764802d4454 247 Gene3D G3DSA:3.10.350.10 78 125 1.6E-15 T 25-04-2017 IPR018392 LysM domain CLFO_RS15480 f5fcaba92ad4bc7338aaf764802d4454 247 Gene3D G3DSA:3.10.350.10 15 61 1.2E-16 T 25-04-2017 IPR018392 LysM domain CLFO_RS20945 a442ca106a5327e9564ef6ab8286e671 159 Pfam PF07282 Putative transposase DNA-binding domain 60 131 3.6E-6 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS20945 a442ca106a5327e9564ef6ab8286e671 159 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 9 85 2.2E-17 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 SUPERFAMILY SSF51735 199 444 1.15E-78 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 SUPERFAMILY SSF53223 3 193 2.4E-74 T 25-04-2017 CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 Gene3D G3DSA:1.10.285.10 370 444 1.8E-27 T 25-04-2017 CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 Gene3D G3DSA:1.10.285.10 4 64 1.6E-25 T 25-04-2017 CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 Gene3D G3DSA:3.40.192.10 65 185 2.9E-61 T 25-04-2017 CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 SMART SM00839 201 443 1.1E-94 T 25-04-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 111 125 3.6E-32 T 25-04-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 3.6E-32 T 25-04-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 233 253 3.6E-32 T 25-04-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 369 380 3.6E-32 T 25-04-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 54 181 8.4E-49 T 25-04-2017 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 PIRSF PIRSF000185 19 445 1.1E-119 T 25-04-2017 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 443 2.1E-91 T 25-04-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 Gene3D G3DSA:3.40.50.720 206 369 1.0E-62 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS20715 5fa0fc5ffd9de16d6c0861c036bb4eeb 445 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 119 132 - T 25-04-2017 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 CLFO_RS04265 7672ca1ea20498a9b661596f13be44cb 105 PIRSF PIRSF000077 1 104 3.4E-23 T 25-04-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLFO_RS04265 7672ca1ea20498a9b661596f13be44cb 105 SUPERFAMILY SSF52833 4 104 7.74E-27 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS04265 7672ca1ea20498a9b661596f13be44cb 105 Pfam PF00085 Thioredoxin 3 103 7.2E-24 T 25-04-2017 IPR013766 Thioredoxin domain GO:0045454 CLFO_RS04265 7672ca1ea20498a9b661596f13be44cb 105 Gene3D G3DSA:3.40.30.10 3 104 1.3E-26 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS19755 19a07ecf0dda2c45cf8d3e48b4c3f3f7 167 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 28.027 T 25-04-2017 IPR022973 Ribosomal protein L10 CLFO_RS19755 19a07ecf0dda2c45cf8d3e48b4c3f3f7 167 SUPERFAMILY SSF160369 5 160 2.88E-55 T 25-04-2017 CLFO_RS19755 19a07ecf0dda2c45cf8d3e48b4c3f3f7 167 Pfam PF00466 Ribosomal protein L10 6 101 1.4E-31 T 25-04-2017 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CLFO_RS18910 5d6e60b5aca20ae7ac3abcaaac60d6ff 233 Pfam PF04972 BON domain 25 88 4.2E-8 T 25-04-2017 IPR007055 BON domain CLFO_RS18910 5d6e60b5aca20ae7ac3abcaaac60d6ff 233 Pfam PF04972 BON domain 95 159 5.6E-12 T 25-04-2017 IPR007055 BON domain CLFO_RS18910 5d6e60b5aca20ae7ac3abcaaac60d6ff 233 Pfam PF04972 BON domain 166 232 1.1E-14 T 25-04-2017 IPR007055 BON domain CLFO_RS03395 eed53b3c854f3ce7ef05cd997f12f012 403 Pfam PF00872 Transposase, Mutator family 14 381 1.0E-118 T 25-04-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLFO_RS03395 eed53b3c854f3ce7ef05cd997f12f012 403 ProSitePatterns PS01007 Transposases, Mutator family, signature. 235 259 - T 25-04-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLFO_RS18755 ad9115bc8bb117304cc0c34ca6d51813 559 Gene3D G3DSA:3.40.50.300 390 474 8.6E-4 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18755 ad9115bc8bb117304cc0c34ca6d51813 559 Pfam PF13401 AAA domain 140 284 2.8E-18 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS18755 ad9115bc8bb117304cc0c34ca6d51813 559 Gene3D G3DSA:3.40.50.300 135 296 1.4E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18755 ad9115bc8bb117304cc0c34ca6d51813 559 SUPERFAMILY SSF52540 139 383 1.13E-11 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16910 70cf99be28693d8dc0350bea0b530e86 252 Gene3D G3DSA:3.40.630.30 61 146 2.3E-9 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS16910 70cf99be28693d8dc0350bea0b530e86 252 Pfam PF00583 Acetyltransferase (GNAT) family 70 109 8.4E-5 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS16910 70cf99be28693d8dc0350bea0b530e86 252 SUPERFAMILY SSF55729 58 142 1.56E-10 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS16910 70cf99be28693d8dc0350bea0b530e86 252 Pfam PF14268 YoaP-like 202 245 3.0E-19 T 25-04-2017 IPR025685 YoaP-like domain CLFO_RS17475 b1f49d1893d471609820eb8e132aa4b1 394 Gene3D G3DSA:1.20.1250.20 197 384 2.4E-14 T 25-04-2017 CLFO_RS17475 b1f49d1893d471609820eb8e132aa4b1 394 Gene3D G3DSA:1.20.1250.20 10 196 4.2E-29 T 25-04-2017 CLFO_RS17475 b1f49d1893d471609820eb8e132aa4b1 394 SUPERFAMILY SSF103473 10 387 3.27E-54 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS17475 b1f49d1893d471609820eb8e132aa4b1 394 Pfam PF07690 Major Facilitator Superfamily 21 263 2.3E-31 T 25-04-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 SUPERFAMILY SSF81660 428 624 1.13E-54 T 25-04-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 Gene3D G3DSA:3.40.1110.10 411 627 1.5E-61 T 25-04-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 SUPERFAMILY SSF81653 213 320 4.97E-31 T 25-04-2017 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 423 429 - T 25-04-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 Pfam PF00702 haloacid dehalogenase-like hydrolase 417 734 1.0E-22 T 25-04-2017 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 515 668 9.9E-22 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 183 283 1.2E-18 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 688 801 5.7E-31 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 306 442 6.5E-23 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 Pfam PF00689 Cation transporting ATPase, C-terminus 805 959 5.5E-29 T 25-04-2017 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 620 631 9.0E-36 T 25-04-2017 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 421 435 9.0E-36 T 25-04-2017 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 721 740 9.0E-36 T 25-04-2017 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 745 757 9.0E-36 T 25-04-2017 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 259 273 9.0E-36 T 25-04-2017 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 652 9.0E-36 T 25-04-2017 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 SUPERFAMILY SSF81665 322 415 8.63E-88 T 25-04-2017 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 SUPERFAMILY SSF81665 771 959 8.63E-88 T 25-04-2017 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 SUPERFAMILY SSF81665 99 212 8.63E-88 T 25-04-2017 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 753 778 5.5E-13 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 693 709 5.5E-13 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 583 601 5.5E-13 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 721 737 5.5E-13 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 Pfam PF00122 E1-E2 ATPase 181 412 4.5E-62 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 Pfam PF00690 Cation transporter/ATPase, N-terminus 101 169 8.2E-14 T 25-04-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 SMART SM00831 100 174 1.5E-15 T 25-04-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 SUPERFAMILY SSF56784 419 439 4.13E-56 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 SUPERFAMILY SSF56784 580 821 4.13E-56 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 Gene3D G3DSA:2.70.150.10 207 321 6.9E-45 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 Gene3D G3DSA:2.70.150.10 111 154 6.9E-45 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 Gene3D G3DSA:1.20.1110.10 155 206 1.4E-85 T 25-04-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CLFO_RS16095 dd1a49a50880cd4ce213665bf1a9fcb0 963 Gene3D G3DSA:1.20.1110.10 690 952 1.4E-85 T 25-04-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CLFO_RS00390 8f2a6fcc2b54a741cf52f8449b3196de 299 Pfam PF04468 PSP1 C-terminal conserved region 61 146 5.6E-33 T 25-04-2017 IPR007557 PSP1, C-terminal CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 SMART SM00220 10 264 3.6E-73 T 25-04-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 SUPERFAMILY SSF56112 7 262 1.48E-83 T 25-04-2017 IPR011009 Protein kinase-like domain CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 SMART SM00740 487 554 1.0E-5 T 25-04-2017 IPR005543 PASTA domain CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 SMART SM00740 351 417 1.2E-8 T 25-04-2017 IPR005543 PASTA domain CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 SMART SM00740 418 484 6.3E-6 T 25-04-2017 IPR005543 PASTA domain CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 Gene3D G3DSA:1.10.510.10 76 260 4.0E-59 T 25-04-2017 CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 Pfam PF03793 PASTA domain 355 416 2.5E-8 T 25-04-2017 IPR005543 PASTA domain CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 Pfam PF03793 PASTA domain 424 484 2.3E-8 T 25-04-2017 IPR005543 PASTA domain CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 Pfam PF03793 PASTA domain 493 553 1.1E-9 T 25-04-2017 IPR005543 PASTA domain CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 25-04-2017 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 16 39 - T 25-04-2017 IPR017441 Protein kinase, ATP binding site GO:0005524 CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 Pfam PF00069 Protein kinase domain 10 259 1.4E-58 T 25-04-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLFO_RS11375 bb123522dd4eafb11e1cdbe1566e1074 657 Gene3D G3DSA:3.30.200.20 2 75 6.0E-28 T 25-04-2017 CLFO_RS21010 b9bb2b94e656567c54b922c44da32b7b 430 Pfam PF00082 Subtilase family 109 378 1.0E-55 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS21010 b9bb2b94e656567c54b922c44da32b7b 430 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 153 163 - T 25-04-2017 IPR022398 Peptidase S8, subtilisin, His-active site CLFO_RS21010 b9bb2b94e656567c54b922c44da32b7b 430 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 114 124 - T 25-04-2017 IPR023827 Peptidase S8, subtilisin, Asp-active site CLFO_RS21010 b9bb2b94e656567c54b922c44da32b7b 430 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 330 340 - T 25-04-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site CLFO_RS21010 b9bb2b94e656567c54b922c44da32b7b 430 SUPERFAMILY SSF52743 100 387 6.41E-84 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS21010 b9bb2b94e656567c54b922c44da32b7b 430 PRINTS PR00723 Subtilisin serine protease family (S8) signature 329 345 1.5E-18 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS21010 b9bb2b94e656567c54b922c44da32b7b 430 PRINTS PR00723 Subtilisin serine protease family (S8) signature 149 162 1.5E-18 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS21010 b9bb2b94e656567c54b922c44da32b7b 430 PRINTS PR00723 Subtilisin serine protease family (S8) signature 109 128 1.5E-18 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS21010 b9bb2b94e656567c54b922c44da32b7b 430 Gene3D G3DSA:3.40.50.200 99 386 1.4E-86 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS04235 afe583e8a61300d884cefed8bf5ea85f 175 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 25 167 1.2E-52 T 25-04-2017 CLFO_RS04235 afe583e8a61300d884cefed8bf5ea85f 175 SUPERFAMILY SSF52833 19 170 7.27E-50 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS04235 afe583e8a61300d884cefed8bf5ea85f 175 Gene3D G3DSA:3.40.30.10 88 167 9.2E-14 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS04235 afe583e8a61300d884cefed8bf5ea85f 175 PIRSF PIRSF000216 7 175 9.7E-56 T 25-04-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS03380 ce147f201ec4e62c042ab8b8618193e4 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 170 198 - T 25-04-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLFO_RS03380 ce147f201ec4e62c042ab8b8618193e4 386 Gene3D G3DSA:3.40.50.1970 3 181 2.9E-54 T 25-04-2017 CLFO_RS03380 ce147f201ec4e62c042ab8b8618193e4 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 374 3.4E-112 T 25-04-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLFO_RS03380 ce147f201ec4e62c042ab8b8618193e4 386 SUPERFAMILY SSF56796 3 384 2.88E-118 T 25-04-2017 CLFO_RS03380 ce147f201ec4e62c042ab8b8618193e4 386 Gene3D G3DSA:1.20.1090.10 182 382 4.0E-70 T 25-04-2017 CLFO_RS03380 ce147f201ec4e62c042ab8b8618193e4 386 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 257 277 - T 25-04-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CLFO_RS03860 37205aee1fc26f843e027794628712df 237 Pfam PF07729 FCD domain 102 222 2.3E-22 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS03860 37205aee1fc26f843e027794628712df 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 3.7E-5 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS03860 37205aee1fc26f843e027794628712df 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 3.7E-5 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS03860 37205aee1fc26f843e027794628712df 237 SUPERFAMILY SSF48008 98 229 4.05E-25 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS03860 37205aee1fc26f843e027794628712df 237 SMART SM00345 18 77 1.6E-18 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS03860 37205aee1fc26f843e027794628712df 237 SUPERFAMILY SSF46785 11 81 1.01E-16 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03860 37205aee1fc26f843e027794628712df 237 SMART SM00895 102 223 1.3E-20 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS03860 37205aee1fc26f843e027794628712df 237 Gene3D G3DSA:1.10.10.10 10 81 4.9E-20 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03860 37205aee1fc26f843e027794628712df 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 1.7E-15 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS03860 37205aee1fc26f843e027794628712df 237 Gene3D G3DSA:1.20.120.530 96 234 2.7E-27 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS13770 c763a9bf57a9d1921f392dd15e2e9eb1 413 Pfam PF13343 Bacterial extracellular solute-binding protein 147 386 1.2E-65 T 25-04-2017 CLFO_RS13770 c763a9bf57a9d1921f392dd15e2e9eb1 413 SUPERFAMILY SSF53850 166 404 1.27E-18 T 25-04-2017 CLFO_RS13770 c763a9bf57a9d1921f392dd15e2e9eb1 413 Gene3D G3DSA:3.40.190.10 205 346 2.1E-10 T 25-04-2017 CLFO_RS13770 c763a9bf57a9d1921f392dd15e2e9eb1 413 SUPERFAMILY SSF140683 6 75 2.48E-14 T 25-04-2017 CLFO_RS13770 c763a9bf57a9d1921f392dd15e2e9eb1 413 Gene3D G3DSA:1.10.3910.10 4 73 4.5E-16 T 25-04-2017 IPR015077 Domain of unknown function DUF1858 CLFO_RS13770 c763a9bf57a9d1921f392dd15e2e9eb1 413 Pfam PF08984 Domain of unknown function (DUF1858) 6 64 8.2E-12 T 25-04-2017 IPR015077 Domain of unknown function DUF1858 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 4 329 2.1E-147 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 SUPERFAMILY SSF53067 144 326 1.17E-47 T 25-04-2017 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 Gene3D G3DSA:3.30.420.40 5 154 4.4E-46 T 25-04-2017 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 Gene3D G3DSA:3.90.640.10 181 252 4.0E-29 T 25-04-2017 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 126 145 6.8E-59 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 294 320 6.8E-59 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 181 201 6.8E-59 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 63 86 6.8E-59 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 43 61 6.8E-59 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 SUPERFAMILY SSF53067 4 142 4.15E-41 T 25-04-2017 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 Gene3D G3DSA:3.30.420.40 257 310 4.6E-33 T 25-04-2017 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 Gene3D G3DSA:3.30.420.40 155 180 4.6E-33 T 25-04-2017 CLFO_RS01075 4118c862f07daaab97102fed5a655ecf 340 Pfam PF06723 MreB/Mbl protein 6 328 2.7E-146 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS13260 ebb6d32e5dc238e23105f814cb0030c4 123 SUPERFAMILY SSF55729 1 115 9.78E-20 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS13260 ebb6d32e5dc238e23105f814cb0030c4 123 Pfam PF00583 Acetyltransferase (GNAT) family 60 111 4.1E-8 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS13260 ebb6d32e5dc238e23105f814cb0030c4 123 Gene3D G3DSA:3.40.630.30 1 115 2.1E-19 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS10370 e04d8db3ec314fe7c995ef7863f05ee3 378 Pfam PF04865 Baseplate J-like protein 71 319 2.0E-55 T 25-04-2017 IPR006949 Baseplate protein J-like CLFO_RS13655 dea8b4856cd0d413917c5bd87c9513c1 193 Gene3D G3DSA:1.10.357.10 64 190 4.0E-17 T 25-04-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLFO_RS13655 dea8b4856cd0d413917c5bd87c9513c1 193 Gene3D G3DSA:1.10.10.60 16 63 5.8E-16 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS13655 dea8b4856cd0d413917c5bd87c9513c1 193 SUPERFAMILY SSF46689 12 77 6.8E-16 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS13655 dea8b4856cd0d413917c5bd87c9513c1 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 4.3E-5 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS13655 dea8b4856cd0d413917c5bd87c9513c1 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 4.3E-5 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS13655 dea8b4856cd0d413917c5bd87c9513c1 193 SUPERFAMILY SSF48498 86 190 8.9E-17 T 25-04-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLFO_RS13655 dea8b4856cd0d413917c5bd87c9513c1 193 Pfam PF08359 YsiA-like protein, C-terminal region 130 186 5.6E-6 T 25-04-2017 IPR013570 Transcription regulator YsiA, C-terminal CLFO_RS13655 dea8b4856cd0d413917c5bd87c9513c1 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 2.5E-12 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS15430 acf64386d8dd4660a6fde06d5b9c4f77 458 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 88 451 1.4E-29 T 25-04-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CLFO_RS15430 acf64386d8dd4660a6fde06d5b9c4f77 458 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 18 444 2.1E-102 T 25-04-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CLFO_RS15430 acf64386d8dd4660a6fde06d5b9c4f77 458 Gene3D G3DSA:2.40.50.140 1 78 4.1E-19 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS15430 acf64386d8dd4660a6fde06d5b9c4f77 458 SUPERFAMILY SSF53335 69 450 4.86E-77 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS15430 acf64386d8dd4660a6fde06d5b9c4f77 458 SUPERFAMILY SSF50249 7 65 7.42E-9 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS15430 acf64386d8dd4660a6fde06d5b9c4f77 458 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 434 444 - T 25-04-2017 IPR030391 RNA methyltransferase TrmA, conserved site CLFO_RS15430 acf64386d8dd4660a6fde06d5b9c4f77 458 Gene3D G3DSA:3.40.50.150 252 450 4.9E-68 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS15430 acf64386d8dd4660a6fde06d5b9c4f77 458 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 382 413 - T 25-04-2017 IPR030390 RNA methyltransferase TrmA, active site CLFO_RS11180 2260d04d142fa763eb4718c7c76cf591 363 Pfam PF02481 DNA recombination-mediator protein A 74 277 6.5E-79 T 25-04-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 CLFO_RS11180 2260d04d142fa763eb4718c7c76cf591 363 SUPERFAMILY SSF102405 82 287 4.27E-40 T 25-04-2017 CLFO_RS11180 2260d04d142fa763eb4718c7c76cf591 363 Gene3D G3DSA:3.40.50.450 114 273 3.3E-13 T 25-04-2017 CLFO_RS11180 2260d04d142fa763eb4718c7c76cf591 363 SUPERFAMILY SSF47781 11 73 5.56E-5 T 25-04-2017 IPR010994 RuvA domain 2-like CLFO_RS11180 2260d04d142fa763eb4718c7c76cf591 363 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 71 287 2.0E-74 T 25-04-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 CLFO_RS11180 2260d04d142fa763eb4718c7c76cf591 363 SUPERFAMILY SSF46785 300 355 2.57E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15780 f75cc90f85ef66ceac94e94ed302c9be 644 Gene3D G3DSA:3.90.1480.10 240 496 1.8E-6 T 25-04-2017 CLFO_RS15780 f75cc90f85ef66ceac94e94ed302c9be 644 Pfam PF01973 Protein of unknown function DUF115 215 385 4.2E-37 T 25-04-2017 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CLFO_RS08320 3a9a9a73250180c3bced670db374abcc 469 Pfam PF13520 Amino acid permease 12 426 7.8E-37 T 25-04-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLFO_RS08320 3a9a9a73250180c3bced670db374abcc 469 PIRSF PIRSF006060 1 468 5.8E-79 T 25-04-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CLFO_RS16775 5500663caa4e2ed6364acd3db6834f75 302 Pfam PF01636 Phosphotransferase enzyme family 28 256 1.7E-21 T 25-04-2017 IPR002575 Aminoglycoside phosphotransferase CLFO_RS16775 5500663caa4e2ed6364acd3db6834f75 302 SUPERFAMILY SSF56112 23 261 1.12E-24 T 25-04-2017 IPR011009 Protein kinase-like domain CLFO_RS16775 5500663caa4e2ed6364acd3db6834f75 302 Gene3D G3DSA:3.90.1200.10 121 253 3.8E-20 T 25-04-2017 CLFO_RS18360 2d72c4d0454a84c7600901f4431f5ab3 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 297 2.9E-6 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS18360 2d72c4d0454a84c7600901f4431f5ab3 331 Gene3D G3DSA:3.40.50.300 2 254 2.0E-72 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18360 2d72c4d0454a84c7600901f4431f5ab3 331 SMART SM00382 38 230 5.6E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS18360 2d72c4d0454a84c7600901f4431f5ab3 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 316 2.0E-11 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS18360 2d72c4d0454a84c7600901f4431f5ab3 331 SUPERFAMILY SSF52540 3 246 5.88E-64 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18360 2d72c4d0454a84c7600901f4431f5ab3 331 TIGRFAM TIGR02769 nickel_nikE: nickel import ATP-binding protein NikE 2 263 5.8E-102 T 25-04-2017 IPR014137 Nickel import ATP-binding protein NikE GO:0005886|GO:0015413|GO:0015675|GO:0016151 CLFO_RS18360 2d72c4d0454a84c7600901f4431f5ab3 331 Pfam PF00005 ABC transporter 29 180 2.4E-32 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS18360 2d72c4d0454a84c7600901f4431f5ab3 331 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS14595 0bd7d31008d701b356e780f110010e3c 230 SUPERFAMILY SSF116726 134 217 4.32E-14 T 25-04-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLFO_RS14595 0bd7d31008d701b356e780f110010e3c 230 SUPERFAMILY SSF51735 5 135 1.43E-29 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14595 0bd7d31008d701b356e780f110010e3c 230 Pfam PF02254 TrkA-N domain 7 122 2.5E-20 T 25-04-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CLFO_RS14595 0bd7d31008d701b356e780f110010e3c 230 Gene3D G3DSA:3.30.70.1450 152 219 2.5E-13 T 25-04-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLFO_RS14595 0bd7d31008d701b356e780f110010e3c 230 Gene3D G3DSA:3.40.50.720 4 138 3.0E-29 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS20365 a2969d833b1933ee000482d261f5b91f 232 Pfam PF04172 LrgB-like family 15 227 8.1E-78 T 25-04-2017 IPR007300 CidB/LrgB family CLFO_RS10325 91cde77d09e39a69c6a20f7389ef2e81 492 SUPERFAMILY SSF110997 347 415 1.83E-14 T 25-04-2017 IPR007730 Sporulation-related domain GO:0042834 CLFO_RS10325 91cde77d09e39a69c6a20f7389ef2e81 492 SMART SM00644 13 149 0.0017 T 25-04-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CLFO_RS10325 91cde77d09e39a69c6a20f7389ef2e81 492 Pfam PF05036 Sporulation related domain 347 414 1.2E-12 T 25-04-2017 IPR007730 Sporulation-related domain GO:0042834 CLFO_RS10325 91cde77d09e39a69c6a20f7389ef2e81 492 Pfam PF05036 Sporulation related domain 382 419 2.4E-6 T 25-04-2017 IPR007730 Sporulation-related domain GO:0042834 CLFO_RS10325 91cde77d09e39a69c6a20f7389ef2e81 492 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 22 150 6.0E-11 T 25-04-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CLFO_RS10325 91cde77d09e39a69c6a20f7389ef2e81 492 Gene3D G3DSA:3.40.80.10 13 153 1.6E-13 T 25-04-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CLFO_RS10325 91cde77d09e39a69c6a20f7389ef2e81 492 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 209 338 9.5E-12 T 25-04-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CLFO_RS10325 91cde77d09e39a69c6a20f7389ef2e81 492 Gene3D G3DSA:3.30.70.1070 346 415 1.1E-18 T 25-04-2017 IPR007730 Sporulation-related domain GO:0042834 CLFO_RS10325 91cde77d09e39a69c6a20f7389ef2e81 492 SUPERFAMILY SSF55846 12 154 1.16E-22 T 25-04-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CLFO_RS19470 af8f1089bdf2975dc0199da4b196eb33 362 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.5E-5 T 25-04-2017 CLFO_RS19470 af8f1089bdf2975dc0199da4b196eb33 362 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 254 269 1.5E-5 T 25-04-2017 CLFO_RS19470 af8f1089bdf2975dc0199da4b196eb33 362 Gene3D G3DSA:3.40.50.720 111 140 1.3E-12 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS19470 af8f1089bdf2975dc0199da4b196eb33 362 Gene3D G3DSA:3.40.50.720 2 38 1.3E-12 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS19470 af8f1089bdf2975dc0199da4b196eb33 362 Gene3D G3DSA:3.30.9.10 162 283 4.9E-5 T 25-04-2017 CLFO_RS19470 af8f1089bdf2975dc0199da4b196eb33 362 SUPERFAMILY SSF51905 1 151 3.29E-15 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS19470 af8f1089bdf2975dc0199da4b196eb33 362 SUPERFAMILY SSF51905 241 297 3.29E-15 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS18275 b96214ab449871a1b9f73521e5baf9f9 182 Pfam PF02834 LigT like Phosphoesterase 7 91 2.1E-15 T 25-04-2017 IPR014051 Phosphoesterase, HXTX CLFO_RS18275 b96214ab449871a1b9f73521e5baf9f9 182 Pfam PF02834 LigT like Phosphoesterase 100 167 1.8E-7 T 25-04-2017 IPR014051 Phosphoesterase, HXTX CLFO_RS18275 b96214ab449871a1b9f73521e5baf9f9 182 SUPERFAMILY SSF55144 1 179 2.44E-37 T 25-04-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase CLFO_RS18275 b96214ab449871a1b9f73521e5baf9f9 182 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 1 179 2.6E-40 T 25-04-2017 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CLFO_RS18275 b96214ab449871a1b9f73521e5baf9f9 182 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 179 23.538 T 25-04-2017 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CLFO_RS18275 b96214ab449871a1b9f73521e5baf9f9 182 Gene3D G3DSA:3.90.1140.10 1 179 8.5E-44 T 25-04-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase CLFO_RS13575 8edb4e805b961b2b47b3e9f3a771cb60 379 SUPERFAMILY SSF51445 73 274 1.11E-39 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS13575 8edb4e805b961b2b47b3e9f3a771cb60 379 SUPERFAMILY SSF51445 333 375 1.11E-39 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS13575 8edb4e805b961b2b47b3e9f3a771cb60 379 SUPERFAMILY SSF54106 2 47 6.54E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS13575 8edb4e805b961b2b47b3e9f3a771cb60 379 Gene3D G3DSA:3.10.350.10 2 48 3.1E-16 T 25-04-2017 IPR018392 LysM domain CLFO_RS13575 8edb4e805b961b2b47b3e9f3a771cb60 379 SMART SM00636 57 362 1.4E-15 T 25-04-2017 IPR011583 Chitinase II GO:0004568|GO:0006032 CLFO_RS13575 8edb4e805b961b2b47b3e9f3a771cb60 379 SMART SM00257 3 47 2.1E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS13575 8edb4e805b961b2b47b3e9f3a771cb60 379 Gene3D G3DSA:3.20.20.80 126 361 2.2E-29 T 25-04-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLFO_RS13575 8edb4e805b961b2b47b3e9f3a771cb60 379 Pfam PF00704 Glycosyl hydrolases family 18 136 359 2.6E-20 T 25-04-2017 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 CLFO_RS13575 8edb4e805b961b2b47b3e9f3a771cb60 379 Pfam PF01476 LysM domain 4 47 1.5E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS02840 6ce203c5ae0b198e442fb3da17d079ff 421 SUPERFAMILY SSF58104 91 118 1.83E-70 T 25-04-2017 CLFO_RS02840 6ce203c5ae0b198e442fb3da17d079ff 421 SUPERFAMILY SSF58104 151 420 1.83E-70 T 25-04-2017 CLFO_RS02840 6ce203c5ae0b198e442fb3da17d079ff 421 Gene3D G3DSA:1.10.287.950 160 377 2.9E-55 T 25-04-2017 CLFO_RS02840 6ce203c5ae0b198e442fb3da17d079ff 421 Pfam PF00672 HAMP domain 45 112 1.4E-6 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS02840 6ce203c5ae0b198e442fb3da17d079ff 421 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 35 60 5.1E-20 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS02840 6ce203c5ae0b198e442fb3da17d079ff 421 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 243 270 5.1E-20 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS02840 6ce203c5ae0b198e442fb3da17d079ff 421 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 272 301 5.1E-20 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS02840 6ce203c5ae0b198e442fb3da17d079ff 421 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 166 195 5.1E-20 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS02840 6ce203c5ae0b198e442fb3da17d079ff 421 SMART SM00283 145 420 1.6E-72 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS02840 6ce203c5ae0b198e442fb3da17d079ff 421 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 200 419 6.0E-50 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS02840 6ce203c5ae0b198e442fb3da17d079ff 421 SMART SM00304 61 116 4.2E-5 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS03325 7c45520ffcebeba66f97073493ea24fd 301 ProSitePatterns PS01053 Arginase family signature. 220 241 - T 25-04-2017 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 CLFO_RS03325 7c45520ffcebeba66f97073493ea24fd 301 TIGRFAM TIGR01230 agmatinase: agmatinase 15 290 8.3E-62 T 25-04-2017 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 CLFO_RS03325 7c45520ffcebeba66f97073493ea24fd 301 SUPERFAMILY SSF52768 13 296 1.06E-79 T 25-04-2017 CLFO_RS03325 7c45520ffcebeba66f97073493ea24fd 301 PIRSF PIRSF036979 2 297 1.9E-72 T 25-04-2017 IPR006035 Ureohydrolase GO:0046872 CLFO_RS03325 7c45520ffcebeba66f97073493ea24fd 301 Pfam PF00491 Arginase family 18 290 8.9E-77 T 25-04-2017 IPR006035 Ureohydrolase GO:0046872 CLFO_RS03325 7c45520ffcebeba66f97073493ea24fd 301 PRINTS PR00116 Arginase signature 102 117 3.7E-13 T 25-04-2017 IPR006035 Ureohydrolase GO:0046872 CLFO_RS03325 7c45520ffcebeba66f97073493ea24fd 301 PRINTS PR00116 Arginase signature 217 246 3.7E-13 T 25-04-2017 IPR006035 Ureohydrolase GO:0046872 CLFO_RS03325 7c45520ffcebeba66f97073493ea24fd 301 Gene3D G3DSA:3.40.800.10 14 298 1.2E-81 T 25-04-2017 IPR023696 Ureohydrolase domain CLFO_RS20260 0d6349380783b83d7807e2d99b36173a 236 Gene3D G3DSA:3.30.240.20 170 227 1.8E-11 T 25-04-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLFO_RS20260 0d6349380783b83d7807e2d99b36173a 236 Gene3D G3DSA:3.30.240.20 82 152 1.1E-24 T 25-04-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLFO_RS20260 0d6349380783b83d7807e2d99b36173a 236 Pfam PF04239 Protein of unknown function (DUF421) 89 205 7.8E-27 T 25-04-2017 IPR007353 Protein of unknown function DUF421 CLFO_RS08980 724fdc7980e81e89265a58dc00d4a2db 582 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 19 580 5.6E-156 T 25-04-2017 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CLFO_RS08980 724fdc7980e81e89265a58dc00d4a2db 582 Pfam PF01368 DHH family 74 217 6.7E-12 T 25-04-2017 IPR001667 DDH domain CLFO_RS08980 724fdc7980e81e89265a58dc00d4a2db 582 SUPERFAMILY SSF64182 48 453 1.1E-103 T 25-04-2017 CLFO_RS08980 724fdc7980e81e89265a58dc00d4a2db 582 Pfam PF02272 DHHA1 domain 379 441 1.6E-11 T 25-04-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CLFO_RS16345 454a41adf7ef6343eab1f1d75bb010e4 383 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 183 380 5.7E-9 T 25-04-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CLFO_RS16345 454a41adf7ef6343eab1f1d75bb010e4 383 SUPERFAMILY SSF51726 11 143 4.36E-33 T 25-04-2017 CLFO_RS16345 454a41adf7ef6343eab1f1d75bb010e4 383 SUPERFAMILY SSF51726 182 382 4.36E-33 T 25-04-2017 CLFO_RS16345 454a41adf7ef6343eab1f1d75bb010e4 383 Gene3D G3DSA:3.20.20.210 6 115 1.4E-20 T 25-04-2017 CLFO_RS16345 454a41adf7ef6343eab1f1d75bb010e4 383 Gene3D G3DSA:3.20.20.210 149 381 1.4E-20 T 25-04-2017 CLFO_RS12340 60a346a136a4ba24642bc8416e4945b9 235 SUPERFAMILY SSF47413 3 70 1.34E-16 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS12340 60a346a136a4ba24642bc8416e4945b9 235 Gene3D G3DSA:1.10.260.40 2 74 2.1E-19 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS12340 60a346a136a4ba24642bc8416e4945b9 235 SMART SM00530 11 66 1.7E-13 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS12340 60a346a136a4ba24642bc8416e4945b9 235 Pfam PF01381 Helix-turn-helix 12 65 2.7E-12 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS19525 61df695cc43d91bf5c563f92dde1f94f 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 6.3E-46 T 25-04-2017 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19525 61df695cc43d91bf5c563f92dde1f94f 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 25-04-2017 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CLFO_RS19525 61df695cc43d91bf5c563f92dde1f94f 130 Gene3D G3DSA:3.30.230.10 5 130 2.5E-49 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS19525 61df695cc43d91bf5c563f92dde1f94f 130 SUPERFAMILY SSF54211 6 130 1.52E-46 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS19525 61df695cc43d91bf5c563f92dde1f94f 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.565 T 25-04-2017 IPR023035 Ribosomal protein S9, bacterial/plastid CLFO_RS08625 745c6cc0eb7e664dde025b3adbca9d60 454 TIGRFAM TIGR00835 agcS: amino acid carrier protein 20 447 2.3E-165 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS08625 745c6cc0eb7e664dde025b3adbca9d60 454 PRINTS PR00175 Sodium/alanine symporter signature 218 237 8.2E-57 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS08625 745c6cc0eb7e664dde025b3adbca9d60 454 PRINTS PR00175 Sodium/alanine symporter signature 416 436 8.2E-57 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS08625 745c6cc0eb7e664dde025b3adbca9d60 454 PRINTS PR00175 Sodium/alanine symporter signature 100 122 8.2E-57 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS08625 745c6cc0eb7e664dde025b3adbca9d60 454 PRINTS PR00175 Sodium/alanine symporter signature 190 208 8.2E-57 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS08625 745c6cc0eb7e664dde025b3adbca9d60 454 PRINTS PR00175 Sodium/alanine symporter signature 313 331 8.2E-57 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS08625 745c6cc0eb7e664dde025b3adbca9d60 454 PRINTS PR00175 Sodium/alanine symporter signature 357 379 8.2E-57 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS08625 745c6cc0eb7e664dde025b3adbca9d60 454 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 100 115 - T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS08625 745c6cc0eb7e664dde025b3adbca9d60 454 Pfam PF01235 Sodium:alanine symporter family 67 451 6.8E-152 T 25-04-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CLFO_RS11000 7a3931ee9b0b2d59fa031276dfe1d322 144 SUPERFAMILY SSF50341 3 139 6.15E-38 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS11000 7a3931ee9b0b2d59fa031276dfe1d322 144 Pfam PF01584 CheW-like domain 4 139 3.2E-37 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS11000 7a3931ee9b0b2d59fa031276dfe1d322 144 SMART SM00260 1 137 1.5E-32 T 25-04-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CLFO_RS11000 7a3931ee9b0b2d59fa031276dfe1d322 144 Gene3D G3DSA:2.30.30.40 79 131 1.1E-12 T 25-04-2017 CLFO_RS11000 7a3931ee9b0b2d59fa031276dfe1d322 144 Gene3D G3DSA:2.40.50.180 42 78 2.7E-14 T 25-04-2017 CLFO_RS11370 2847546da1e272e2113aaa13b2d012a2 292 Pfam PF03193 Protein of unknown function, DUF258 61 225 1.0E-59 T 25-04-2017 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 CLFO_RS11370 2847546da1e272e2113aaa13b2d012a2 292 Gene3D G3DSA:2.40.50.140 1 63 7.4E-25 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS11370 2847546da1e272e2113aaa13b2d012a2 292 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 283 3.7E-79 T 25-04-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 CLFO_RS11370 2847546da1e272e2113aaa13b2d012a2 292 SUPERFAMILY SSF50249 1 64 1.2E-13 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS11370 2847546da1e272e2113aaa13b2d012a2 292 Gene3D G3DSA:3.40.50.300 66 222 5.1E-52 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11370 2847546da1e272e2113aaa13b2d012a2 292 Pfam PF16745 RsgA N-terminal domain 3 53 1.2E-21 T 25-04-2017 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal CLFO_RS11370 2847546da1e272e2113aaa13b2d012a2 292 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 2 290 37.778 T 25-04-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 CLFO_RS11370 2847546da1e272e2113aaa13b2d012a2 292 Gene3D G3DSA:1.10.40.50 228 290 1.1E-22 T 25-04-2017 CLFO_RS11370 2847546da1e272e2113aaa13b2d012a2 292 SUPERFAMILY SSF52540 67 287 1.59E-56 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20845 ad0e938b09eb066b7a5467e60a3d3947 233 Gene3D G3DSA:1.10.10.60 175 228 3.0E-7 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS20845 ad0e938b09eb066b7a5467e60a3d3947 233 Gene3D G3DSA:1.10.8.60 99 173 2.8E-22 T 25-04-2017 CLFO_RS20845 ad0e938b09eb066b7a5467e60a3d3947 233 Pfam PF00158 Sigma-54 interaction domain 3 89 2.9E-30 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS20845 ad0e938b09eb066b7a5467e60a3d3947 233 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 12 27 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS20845 ad0e938b09eb066b7a5467e60a3d3947 233 SUPERFAMILY SSF52540 4 168 7.45E-35 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20845 ad0e938b09eb066b7a5467e60a3d3947 233 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 138 147 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS20845 ad0e938b09eb066b7a5467e60a3d3947 233 Gene3D G3DSA:3.40.50.300 11 98 1.1E-24 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14785 d3df32d2bbd2bf7ec10eef800b70027f 689 Gene3D G3DSA:1.10.287.950 436 666 3.8E-42 T 25-04-2017 CLFO_RS14785 d3df32d2bbd2bf7ec10eef800b70027f 689 Gene3D G3DSA:1.10.287.950 364 435 3.8E-4 T 25-04-2017 CLFO_RS14785 d3df32d2bbd2bf7ec10eef800b70027f 689 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 472 670 7.7E-30 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS14785 d3df32d2bbd2bf7ec10eef800b70027f 689 SMART SM00304 328 383 9.2E-7 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS14785 d3df32d2bbd2bf7ec10eef800b70027f 689 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 7.8E-6 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS14785 d3df32d2bbd2bf7ec10eef800b70027f 689 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 525 554 7.8E-6 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS14785 d3df32d2bbd2bf7ec10eef800b70027f 689 SUPERFAMILY SSF58104 418 688 3.01E-55 T 25-04-2017 CLFO_RS14785 d3df32d2bbd2bf7ec10eef800b70027f 689 SUPERFAMILY SSF58104 358 385 3.01E-55 T 25-04-2017 CLFO_RS14785 d3df32d2bbd2bf7ec10eef800b70027f 689 Pfam PF00672 HAMP domain 309 379 3.5E-9 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS14785 d3df32d2bbd2bf7ec10eef800b70027f 689 Gene3D G3DSA:3.30.450.20 171 305 1.5E-10 T 25-04-2017 CLFO_RS14785 d3df32d2bbd2bf7ec10eef800b70027f 689 SMART SM00283 405 688 2.1E-27 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS15500 bd5d08007be648f4362aa052c9b7eee1 162 Gene3D G3DSA:1.10.3210.10 30 149 5.3E-10 T 25-04-2017 IPR006674 HD domain CLFO_RS15500 bd5d08007be648f4362aa052c9b7eee1 162 Pfam PF01966 HD domain 46 160 6.4E-9 T 25-04-2017 IPR006674 HD domain CLFO_RS15500 bd5d08007be648f4362aa052c9b7eee1 162 SUPERFAMILY SSF109604 42 76 1.82E-11 T 25-04-2017 CLFO_RS15500 bd5d08007be648f4362aa052c9b7eee1 162 SUPERFAMILY SSF109604 107 150 1.82E-11 T 25-04-2017 CLFO_RS09700 937ed2bcc489bd98a0af2678c7357f71 139 SUPERFAMILY SSF48013 2 131 1.7E-35 T 25-04-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLFO_RS09700 937ed2bcc489bd98a0af2678c7357f71 139 Pfam PF01029 NusB family 6 130 1.0E-37 T 25-04-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLFO_RS09700 937ed2bcc489bd98a0af2678c7357f71 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 131 5.1E-39 T 25-04-2017 IPR011605 NusB antitermination factor GO:0006353 CLFO_RS09700 937ed2bcc489bd98a0af2678c7357f71 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 1 134 21.176 T 25-04-2017 IPR011605 NusB antitermination factor GO:0006353 CLFO_RS09700 937ed2bcc489bd98a0af2678c7357f71 139 Gene3D G3DSA:1.10.940.10 1 132 1.4E-43 T 25-04-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CLFO_RS03700 c716af1619700dd7f84473d773b5fe83 87 Pfam PF00381 PTS HPr component phosphorylation site 3 82 5.3E-23 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS03700 c716af1619700dd7f84473d773b5fe83 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.8E-25 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS03700 c716af1619700dd7f84473d773b5fe83 87 Gene3D G3DSA:3.30.1340.10 1 83 2.0E-25 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS03700 c716af1619700dd7f84473d773b5fe83 87 SUPERFAMILY SSF55594 3 83 9.68E-22 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS03700 c716af1619700dd7f84473d773b5fe83 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.0E-12 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS03700 c716af1619700dd7f84473d773b5fe83 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.0E-12 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS03700 c716af1619700dd7f84473d773b5fe83 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.0E-12 T 25-04-2017 IPR000032 Phosphocarrier protein HPr-like CLFO_RS05505 bbae66cda7976a0db991761639dba5b4 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 25-04-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS05505 bbae66cda7976a0db991761639dba5b4 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.4E-48 T 25-04-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS05505 bbae66cda7976a0db991761639dba5b4 119 Pfam PF00453 Ribosomal protein L20 3 109 2.4E-46 T 25-04-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS05505 bbae66cda7976a0db991761639dba5b4 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.695 T 25-04-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS05505 bbae66cda7976a0db991761639dba5b4 119 SUPERFAMILY SSF74731 3 116 1.44E-47 T 25-04-2017 CLFO_RS05505 bbae66cda7976a0db991761639dba5b4 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 68 1.0E-18 T 25-04-2017 CLFO_RS05505 bbae66cda7976a0db991761639dba5b4 119 Gene3D G3DSA:1.10.1900.20 55 117 1.3E-31 T 25-04-2017 CLFO_RS05505 bbae66cda7976a0db991761639dba5b4 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.6E-39 T 25-04-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS05505 bbae66cda7976a0db991761639dba5b4 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.6E-39 T 25-04-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS05505 bbae66cda7976a0db991761639dba5b4 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.6E-39 T 25-04-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11810 b4c42afb1a5ec7669559cc375f99ad9b 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 172 2.4E-68 T 25-04-2017 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CLFO_RS11810 b4c42afb1a5ec7669559cc375f99ad9b 178 SUPERFAMILY SSF53271 2 178 5.24E-59 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS11810 b4c42afb1a5ec7669559cc375f99ad9b 178 Gene3D G3DSA:3.40.50.2020 1 178 2.3E-82 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS11810 b4c42afb1a5ec7669559cc375f99ad9b 178 Pfam PF00156 Phosphoribosyl transferase domain 9 159 1.8E-25 T 25-04-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLFO_RS09925 6a864b80efe30fef4a1bf360dea96193 677 SMART SM00388 449 515 4.5E-18 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09925 6a864b80efe30fef4a1bf360dea96193 677 SMART SM00387 561 670 2.0E-7 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09925 6a864b80efe30fef4a1bf360dea96193 677 Gene3D G3DSA:1.10.287.130 442 511 1.6E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09925 6a864b80efe30fef4a1bf360dea96193 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 656 1.5E-6 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09925 6a864b80efe30fef4a1bf360dea96193 677 SUPERFAMILY SSF55874 504 653 2.87E-17 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09925 6a864b80efe30fef4a1bf360dea96193 677 SUPERFAMILY SSF47384 436 516 1.61E-16 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09925 6a864b80efe30fef4a1bf360dea96193 677 Gene3D G3DSA:3.30.565.10 516 669 4.6E-20 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09925 6a864b80efe30fef4a1bf360dea96193 677 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 515 1.7E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS19430 63aa97e381909c254c7bbe07ea9892f6 126 SUPERFAMILY SSF54631 1 123 2.27E-31 T 25-04-2017 CLFO_RS19430 63aa97e381909c254c7bbe07ea9892f6 126 SMART SM00116 10 58 2.2E-9 T 25-04-2017 IPR000644 CBS domain CLFO_RS19430 63aa97e381909c254c7bbe07ea9892f6 126 SMART SM00116 75 122 5.0E-5 T 25-04-2017 IPR000644 CBS domain CLFO_RS19430 63aa97e381909c254c7bbe07ea9892f6 126 Gene3D G3DSA:3.10.580.10 1 123 6.3E-31 T 25-04-2017 CLFO_RS19430 63aa97e381909c254c7bbe07ea9892f6 126 Pfam PF00571 CBS domain 71 122 1.6E-10 T 25-04-2017 IPR000644 CBS domain CLFO_RS19430 63aa97e381909c254c7bbe07ea9892f6 126 Pfam PF00571 CBS domain 3 58 2.8E-12 T 25-04-2017 IPR000644 CBS domain CLFO_RS00040 3abeac56e23e787c4e9875c0462bfb9e 105 Gene3D G3DSA:3.30.750.24 10 104 1.9E-27 T 25-04-2017 IPR002645 STAS domain CLFO_RS00040 3abeac56e23e787c4e9875c0462bfb9e 105 Pfam PF01740 STAS domain 19 101 1.9E-13 T 25-04-2017 IPR002645 STAS domain CLFO_RS00040 3abeac56e23e787c4e9875c0462bfb9e 105 SUPERFAMILY SSF52091 11 103 2.94E-21 T 25-04-2017 IPR002645 STAS domain CLFO_RS00040 3abeac56e23e787c4e9875c0462bfb9e 105 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 8 103 5.3E-22 T 25-04-2017 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 CLFO_RS21320 19138cd6518136c48d64076cdbaca7bb 307 SUPERFAMILY SSF53067 6 145 1.42E-13 T 25-04-2017 CLFO_RS21320 19138cd6518136c48d64076cdbaca7bb 307 Gene3D G3DSA:3.30.420.40 7 166 2.7E-8 T 25-04-2017 CLFO_RS21320 19138cd6518136c48d64076cdbaca7bb 307 Pfam PF06406 StbA protein 48 294 2.3E-5 T 25-04-2017 IPR009440 Plasmid segregation protein ParM/StbA CLFO_RS21320 19138cd6518136c48d64076cdbaca7bb 307 SUPERFAMILY SSF53067 155 299 6.61E-10 T 25-04-2017 CLFO_RS01745 4155bd41c83046d35640ff7a90f2dddb 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 326 1.5E-53 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS15665 f6ec2b93d662434ec283f38ff666d819 266 Gene3D G3DSA:2.30.30.330 7 111 2.4E-12 T 25-04-2017 CLFO_RS15665 f6ec2b93d662434ec283f38ff666d819 266 Gene3D G3DSA:2.30.30.330 212 262 2.4E-12 T 25-04-2017 CLFO_RS15665 f6ec2b93d662434ec283f38ff666d819 266 Gene3D G3DSA:2.30.30.330 144 178 2.4E-12 T 25-04-2017 CLFO_RS15665 f6ec2b93d662434ec283f38ff666d819 266 SUPERFAMILY SSF54001 154 172 1.86E-14 T 25-04-2017 CLFO_RS15665 f6ec2b93d662434ec283f38ff666d819 266 SUPERFAMILY SSF54001 8 115 1.86E-14 T 25-04-2017 CLFO_RS04715 14805583e369ee899e656fc439e8b1b1 548 Pfam PF13005 zinc-finger binding domain of transposase IS66 135 178 1.7E-12 T 25-04-2017 IPR024474 Zinc-finger binding domain of transposase IS66 CLFO_RS04715 14805583e369ee899e656fc439e8b1b1 548 Pfam PF03050 Transposase IS66 family 198 488 8.4E-87 T 25-04-2017 IPR004291 Transposase, IS66 CLFO_RS08010 14805583e369ee899e656fc439e8b1b1 548 Pfam PF13005 zinc-finger binding domain of transposase IS66 135 178 1.7E-12 T 25-04-2017 IPR024474 Zinc-finger binding domain of transposase IS66 CLFO_RS08010 14805583e369ee899e656fc439e8b1b1 548 Pfam PF03050 Transposase IS66 family 198 488 8.4E-87 T 25-04-2017 IPR004291 Transposase, IS66 CLFO_RS09190 d3343f51451872a3639f66f00d13cff6 351 Gene3D G3DSA:3.40.50.720 2 191 9.2E-68 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS09190 d3343f51451872a3639f66f00d13cff6 351 SUPERFAMILY SSF51735 2 347 8.99E-92 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS09190 d3343f51451872a3639f66f00d13cff6 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 333 4.8E-145 T 25-04-2017 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CLFO_RS09190 d3343f51451872a3639f66f00d13cff6 351 Gene3D G3DSA:3.90.25.10 192 346 2.2E-54 T 25-04-2017 CLFO_RS09190 d3343f51451872a3639f66f00d13cff6 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 321 1.2E-97 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 SUPERFAMILY SSF49265 1686 1874 1.95E-21 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 SUPERFAMILY SSF49265 1974 2151 2.02E-23 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Pfam PF00041 Fibronectin type III domain 2079 2148 2.4E-8 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Pfam PF00041 Fibronectin type III domain 1980 2049 3.5E-8 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Pfam PF00041 Fibronectin type III domain 1694 1762 1.3E-7 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Pfam PF00041 Fibronectin type III domain 1317 1391 1.2E-9 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Pfam PF00041 Fibronectin type III domain 1792 1861 1.1E-6 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Pfam PF00041 Fibronectin type III domain 1422 1495 3.7E-11 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 SUPERFAMILY SSF49265 1317 1498 9.48E-23 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Pfam PF00395 S-layer homology domain 2394 2434 1.8E-13 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Pfam PF00395 S-layer homology domain 2337 2377 3.5E-13 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Pfam PF00395 S-layer homology domain 2452 2495 6.7E-10 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Gene3D G3DSA:2.60.40.10 1786 1874 2.6E-15 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Gene3D G3DSA:2.60.40.10 2073 2161 1.2E-16 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Gene3D G3DSA:2.60.40.10 1422 1503 1.6E-13 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Gene3D G3DSA:2.60.40.10 1974 2061 7.6E-17 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Gene3D G3DSA:2.60.40.10 1317 1398 9.8E-13 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Gene3D G3DSA:2.60.40.10 1685 1774 3.1E-16 T 25-04-2017 IPR013783 Immunoglobulin-like fold CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 SMART SM00060 1414 1496 1.3E-5 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 SMART SM00060 1688 1764 2.1E-6 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 SMART SM00060 2075 2150 2.7E-8 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 SMART SM00060 1310 1392 0.0012 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 SMART SM00060 1976 2051 2.2E-8 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 SMART SM00060 1788 1863 2.1E-7 T 25-04-2017 IPR003961 Fibronectin type III GO:0005515 CLFO_RS03640 f04fd6ae3968b88ec25d36c0dfd6621f 2505 Pfam PF06739 Beta-propeller repeat 538 565 2.0E-4 T 25-04-2017 IPR010620 Beta-propeller repeat CLFO_RS02170 2050ea832870ded0e44da1cf39b8d7d6 482 Gene3D G3DSA:3.40.309.10 315 406 3.5E-22 T 25-04-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLFO_RS02170 2050ea832870ded0e44da1cf39b8d7d6 482 Gene3D G3DSA:3.40.309.10 231 278 3.5E-22 T 25-04-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLFO_RS02170 2050ea832870ded0e44da1cf39b8d7d6 482 SUPERFAMILY SSF53720 10 450 8.77E-79 T 25-04-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CLFO_RS02170 2050ea832870ded0e44da1cf39b8d7d6 482 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 5 469 5.9E-221 T 25-04-2017 IPR013357 Acetaldehyde dehydrogenase, acetylating CLFO_RS02170 2050ea832870ded0e44da1cf39b8d7d6 482 Pfam PF00171 Aldehyde dehydrogenase family 12 285 3.3E-26 T 25-04-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CLFO_RS02170 2050ea832870ded0e44da1cf39b8d7d6 482 Gene3D G3DSA:3.40.605.10 10 230 9.8E-26 T 25-04-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CLFO_RS21055 211ce8c9de389c28db88b48d74501af6 236 SMART SM00850 138 235 2.9E-21 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS21055 211ce8c9de389c28db88b48d74501af6 236 Pfam PF00072 Response regulator receiver domain 4 112 1.4E-18 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS21055 211ce8c9de389c28db88b48d74501af6 236 SMART SM00448 2 113 9.6E-16 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS21055 211ce8c9de389c28db88b48d74501af6 236 Gene3D G3DSA:3.40.50.2300 1 123 5.4E-26 T 25-04-2017 CLFO_RS21055 211ce8c9de389c28db88b48d74501af6 236 Pfam PF04397 LytTr DNA-binding domain 139 232 1.4E-21 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS21055 211ce8c9de389c28db88b48d74501af6 236 SUPERFAMILY SSF52172 1 117 7.26E-24 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS21055 211ce8c9de389c28db88b48d74501af6 236 Gene3D G3DSA:2.40.50.40 131 197 1.2E-19 T 25-04-2017 CLFO_RS01340 eef2d52dbb9ec1f1c71c53673729e34b 141 TIGRFAM TIGR03826 YvyF: flagellar operon protein TIGR03826 1 138 9.0E-41 T 25-04-2017 IPR022258 Flagellar operon protein YvyF CLFO_RS01560 99039416d86703a35068ccb79c85e7c4 313 Pfam PF01758 Sodium Bile acid symporter family 221 312 6.9E-11 T 25-04-2017 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CLFO_RS01560 99039416d86703a35068ccb79c85e7c4 313 Pfam PF03547 Membrane transport protein 6 168 9.2E-18 T 25-04-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CLFO_RS10335 e2141b615f92d96584a0c15c3dfeaacc 361 SUPERFAMILY SSF56672 26 336 1.45E-32 T 25-04-2017 CLFO_RS10335 e2141b615f92d96584a0c15c3dfeaacc 361 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 71 274 2.9E-23 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS11505 bd9357268ba23cbe0d404b426f08772b 232 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 4 230 1.9E-62 T 25-04-2017 IPR011078 Uncharacterised protein family UPF0001 CLFO_RS11505 bd9357268ba23cbe0d404b426f08772b 232 SUPERFAMILY SSF51419 4 228 3.93E-76 T 25-04-2017 IPR029066 PLP-binding barrel CLFO_RS11505 bd9357268ba23cbe0d404b426f08772b 232 PIRSF PIRSF004848 4 232 2.4E-80 T 25-04-2017 IPR011078 Uncharacterised protein family UPF0001 CLFO_RS11505 bd9357268ba23cbe0d404b426f08772b 232 Pfam PF01168 Alanine racemase, N-terminal domain 10 230 7.2E-23 T 25-04-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS11505 bd9357268ba23cbe0d404b426f08772b 232 Gene3D G3DSA:3.20.20.10 5 232 2.6E-84 T 25-04-2017 IPR029066 PLP-binding barrel CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 Pfam PF08245 Mur ligase middle domain 35 238 3.4E-12 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 PRINTS PR01758 Capsule biosynthesis protein CapB signature 34 50 2.1E-70 T 25-04-2017 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 PRINTS PR01758 Capsule biosynthesis protein CapB signature 57 74 2.1E-70 T 25-04-2017 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 PRINTS PR01758 Capsule biosynthesis protein CapB signature 257 274 2.1E-70 T 25-04-2017 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 PRINTS PR01758 Capsule biosynthesis protein CapB signature 111 126 2.1E-70 T 25-04-2017 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 PRINTS PR01758 Capsule biosynthesis protein CapB signature 162 179 2.1E-70 T 25-04-2017 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 PRINTS PR01758 Capsule biosynthesis protein CapB signature 140 155 2.1E-70 T 25-04-2017 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 PRINTS PR01758 Capsule biosynthesis protein CapB signature 292 307 2.1E-70 T 25-04-2017 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 PRINTS PR01758 Capsule biosynthesis protein CapB signature 361 377 2.1E-70 T 25-04-2017 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 PRINTS PR01758 Capsule biosynthesis protein CapB signature 77 95 2.1E-70 T 25-04-2017 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 PRINTS PR01758 Capsule biosynthesis protein CapB signature 196 213 2.1E-70 T 25-04-2017 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 Gene3D G3DSA:3.40.1190.10 33 171 3.2E-13 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 SUPERFAMILY SSF53623 33 75 2.75E-17 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 SUPERFAMILY SSF53623 104 235 2.75E-17 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS15415 7e79e233213bedf41c84287d90f7b6e7 398 TIGRFAM TIGR04012 poly_gGlu_PgsB: poly-gamma-glutamate synthase PgsB 5 382 4.2E-161 T 25-04-2017 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 CLFO_RS00170 c589acef8ff0ad01172c83ddf024e885 63 Pfam PF06107 Bacterial protein of unknown function (DUF951) 6 58 1.0E-27 T 25-04-2017 IPR009296 Protein of unknown function DUF951 CLFO_RS00170 c589acef8ff0ad01172c83ddf024e885 63 PIRSF PIRSF037263 1 63 3.8E-26 T 25-04-2017 IPR009296 Protein of unknown function DUF951 CLFO_RS14515 35939535732cbe65a49a391e8b88fc7f 187 TIGRFAM TIGR00277 HDIG: HDIG domain 18 87 9.9E-8 T 25-04-2017 IPR006675 HDIG domain CLFO_RS14515 35939535732cbe65a49a391e8b88fc7f 187 Gene3D G3DSA:1.10.3210.10 2 153 2.2E-30 T 25-04-2017 IPR006674 HD domain CLFO_RS14515 35939535732cbe65a49a391e8b88fc7f 187 Pfam PF01966 HD domain 21 87 4.3E-5 T 25-04-2017 IPR006674 HD domain CLFO_RS14515 35939535732cbe65a49a391e8b88fc7f 187 SUPERFAMILY SSF109604 15 159 1.85E-14 T 25-04-2017 CLFO_RS05655 a5cb31d8fcd2be5fc2221547d441af5f 647 Gene3D G3DSA:3.30.420.40 213 298 5.8E-4 T 25-04-2017 CLFO_RS05655 a5cb31d8fcd2be5fc2221547d441af5f 647 Pfam PF14574 Domain of unknown function (DUF4445) 213 624 6.1E-146 T 25-04-2017 IPR027980 Protein of unknown function DUF4445 CLFO_RS05655 a5cb31d8fcd2be5fc2221547d441af5f 647 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 79 2.3E-10 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS05655 a5cb31d8fcd2be5fc2221547d441af5f 647 SUPERFAMILY SSF53067 214 243 1.11E-5 T 25-04-2017 CLFO_RS05655 a5cb31d8fcd2be5fc2221547d441af5f 647 SUPERFAMILY SSF53067 360 404 1.11E-5 T 25-04-2017 CLFO_RS05655 a5cb31d8fcd2be5fc2221547d441af5f 647 SUPERFAMILY SSF53067 498 561 1.11E-5 T 25-04-2017 CLFO_RS05655 a5cb31d8fcd2be5fc2221547d441af5f 647 SUPERFAMILY SSF53067 271 314 1.11E-5 T 25-04-2017 CLFO_RS05655 a5cb31d8fcd2be5fc2221547d441af5f 647 SUPERFAMILY SSF54292 2 89 1.91E-20 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS05655 a5cb31d8fcd2be5fc2221547d441af5f 647 Gene3D G3DSA:3.10.20.30 3 89 1.2E-20 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS15325 cf8a0710f23d2022f935d204c009c8ea 170 Pfam PF11385 Protein of unknown function (DUF3189) 3 149 2.0E-48 T 25-04-2017 IPR021525 Protein of unknown function DUF3189 CLFO_RS08285 2706c413f02dc7db99672744927be690 305 Gene3D G3DSA:3.40.50.1100 135 305 3.9E-76 T 25-04-2017 CLFO_RS08285 2706c413f02dc7db99672744927be690 305 SUPERFAMILY SSF53686 2 304 2.75E-104 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS08285 2706c413f02dc7db99672744927be690 305 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 304 2.5E-138 T 25-04-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CLFO_RS08285 2706c413f02dc7db99672744927be690 305 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 304 2.6E-143 T 25-04-2017 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CLFO_RS08285 2706c413f02dc7db99672744927be690 305 Gene3D G3DSA:3.40.50.1100 38 134 1.5E-43 T 25-04-2017 CLFO_RS08285 2706c413f02dc7db99672744927be690 305 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 292 6.3E-71 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS08285 2706c413f02dc7db99672744927be690 305 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 25-04-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CLFO_RS17495 c21d12668bb091d708ef47e6b09b2fc7 216 SUPERFAMILY SSF47644 8 88 5.1E-18 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17495 c21d12668bb091d708ef47e6b09b2fc7 216 Pfam PF02310 B12 binding domain 96 198 2.1E-22 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS17495 c21d12668bb091d708ef47e6b09b2fc7 216 SMART SM01018 5 90 9.3E-21 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17495 c21d12668bb091d708ef47e6b09b2fc7 216 Pfam PF02607 B12 binding domain 9 83 5.5E-14 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17495 c21d12668bb091d708ef47e6b09b2fc7 216 SUPERFAMILY SSF52242 77 215 9.94E-42 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS17495 c21d12668bb091d708ef47e6b09b2fc7 216 Gene3D G3DSA:3.40.50.280 82 216 1.9E-47 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS17495 c21d12668bb091d708ef47e6b09b2fc7 216 Gene3D G3DSA:1.10.1240.10 9 81 9.1E-13 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS19910 14e7f3b214a52f4b4c9cf5d25b8df3b6 102 Pfam PF02593 Domain of unknown function 1 97 1.9E-23 T 25-04-2017 IPR003745 Protein of unknown function DUF166 CLFO_RS20100 4cd8c24f331d687434bf79a95ee8c3f7 220 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 6 166 1.0E-57 T 25-04-2017 IPR014202 Sporulation stage II, protein R CLFO_RS20100 4cd8c24f331d687434bf79a95ee8c3f7 220 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 36 161 4.8E-49 T 25-04-2017 IPR014202 Sporulation stage II, protein R CLFO_RS01125 8a7c2e88f8f1b091fd8173a2318324e6 207 Pfam PF02397 Bacterial sugar transferase 7 185 6.0E-56 T 25-04-2017 IPR003362 Bacterial sugar transferase CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 Pfam PF00365 Phosphofructokinase 4 275 2.5E-106 T 25-04-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 PIRSF PIRSF000532 1 318 3.2E-118 T 25-04-2017 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 5.7E-84 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 5.7E-84 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 5.7E-84 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 5.7E-84 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 5.7E-84 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 5.7E-84 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 5.7E-84 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 5.7E-84 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 5.7E-84 T 25-04-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 46.54 T 25-04-2017 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 SUPERFAMILY SSF53784 1 314 3.01E-115 T 25-04-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 Gene3D G3DSA:3.40.50.450 1 211 1.3E-71 T 25-04-2017 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 25-04-2017 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CLFO_RS17435 4a08f151cfaa4e2febad4a682a366c96 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 299 1.6E-127 T 25-04-2017 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CLFO_RS06030 3931bb85cf8bb0048a8a0dbdb49aa595 133 SMART SM00226 3 127 2.0E-39 T 25-04-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLFO_RS06030 3931bb85cf8bb0048a8a0dbdb49aa595 133 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 124 3.3E-23 T 25-04-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLFO_RS06030 3931bb85cf8bb0048a8a0dbdb49aa595 133 SUPERFAMILY SSF52788 1 126 1.14E-36 T 25-04-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLFO_RS06030 3931bb85cf8bb0048a8a0dbdb49aa595 133 Gene3D G3DSA:3.40.50.270 1 126 4.8E-40 T 25-04-2017 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 SUPERFAMILY SSF82866 800 1022 8.37E-51 T 25-04-2017 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 Pfam PF00873 AcrB/AcrD/AcrF family 1 1017 2.1E-177 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 SUPERFAMILY SSF82714 711 798 7.19E-7 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.4E-20 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.4E-20 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.4E-20 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.4E-20 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.4E-20 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 Gene3D G3DSA:3.30.2090.10 182 262 4.5E-13 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 Gene3D G3DSA:3.30.2090.10 710 799 1.2E-7 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 Gene3D G3DSA:1.20.1640.10 299 499 2.6E-42 T 25-04-2017 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 Gene3D G3DSA:1.10.3850.10 805 1017 3.2E-59 T 25-04-2017 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 SUPERFAMILY SSF82866 297 489 9.81E-35 T 25-04-2017 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 SUPERFAMILY SSF82693 267 322 9.94E-9 T 25-04-2017 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 SUPERFAMILY SSF82693 136 179 9.94E-9 T 25-04-2017 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 Gene3D G3DSA:3.30.70.1320 139 176 3.9E-6 T 25-04-2017 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 Gene3D G3DSA:3.30.70.1320 269 298 3.9E-6 T 25-04-2017 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 SUPERFAMILY SSF82714 181 263 1.57E-13 T 25-04-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 SUPERFAMILY SSF82693 41 129 8.37E-17 T 25-04-2017 CLFO_RS09915 1cd4fcd946c00617064d0ea863e0992f 1029 Gene3D G3DSA:3.30.70.1430 41 134 5.2E-20 T 25-04-2017 CLFO_RS14760 88a933625cb00ca5ba6dafe059d5cfc7 451 SUPERFAMILY SSF52540 73 356 9.98E-74 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14760 88a933625cb00ca5ba6dafe059d5cfc7 451 SMART SM00490 255 336 3.9E-30 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS14760 88a933625cb00ca5ba6dafe059d5cfc7 451 SMART SM00487 22 219 3.4E-64 T 25-04-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLFO_RS14760 88a933625cb00ca5ba6dafe059d5cfc7 451 Gene3D G3DSA:3.40.50.300 209 373 3.6E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14760 88a933625cb00ca5ba6dafe059d5cfc7 451 Pfam PF00270 DEAD/DEAH box helicase 27 191 1.3E-52 T 25-04-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLFO_RS14760 88a933625cb00ca5ba6dafe059d5cfc7 451 Pfam PF00271 Helicase conserved C-terminal domain 242 336 5.3E-27 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS14760 88a933625cb00ca5ba6dafe059d5cfc7 451 Gene3D G3DSA:3.40.50.300 4 208 5.1E-81 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14300 4b821a350da331d451314f988389783e 248 SUPERFAMILY SSF51351 1 247 4.97E-97 T 25-04-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14300 4b821a350da331d451314f988389783e 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 40.237 T 25-04-2017 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14300 4b821a350da331d451314f988389783e 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.3E-63 T 25-04-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14300 4b821a350da331d451314f988389783e 248 Gene3D G3DSA:3.20.20.70 1 247 6.1E-109 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS14300 4b821a350da331d451314f988389783e 248 Pfam PF00121 Triosephosphate isomerase 5 246 8.4E-99 T 25-04-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14300 4b821a350da331d451314f988389783e 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 25-04-2017 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS00950 c3ab0e1eb0893354648e7a2f3d288b72 333 Pfam PF03481 Putative GTP-binding controlling metal-binding 187 327 7.9E-28 T 25-04-2017 IPR005145 Putative GTP-binding controlling metal-binding domain CLFO_RS00950 c3ab0e1eb0893354648e7a2f3d288b72 333 SUPERFAMILY SSF55821 4 197 1.8E-66 T 25-04-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain CLFO_RS00950 c3ab0e1eb0893354648e7a2f3d288b72 333 Pfam PF01300 Telomere recombination 9 185 1.9E-58 T 25-04-2017 IPR006070 YrdC-like domain GO:0003725 CLFO_RS00950 c3ab0e1eb0893354648e7a2f3d288b72 333 PIRSF PIRSF004930 1 333 3.2E-128 T 25-04-2017 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CLFO_RS00950 c3ab0e1eb0893354648e7a2f3d288b72 333 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 3 195 8.4E-65 T 25-04-2017 IPR006070 YrdC-like domain GO:0003725 CLFO_RS00950 c3ab0e1eb0893354648e7a2f3d288b72 333 Gene3D G3DSA:3.90.870.10 2 192 2.9E-77 T 25-04-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain CLFO_RS03820 cc2940de1ed168f201d8af4c029f9944 339 SUPERFAMILY SSF51735 136 303 1.73E-34 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03820 cc2940de1ed168f201d8af4c029f9944 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 25-04-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CLFO_RS03820 cc2940de1ed168f201d8af4c029f9944 339 Gene3D G3DSA:3.40.50.720 165 283 6.1E-34 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03820 cc2940de1ed168f201d8af4c029f9944 339 Pfam PF00107 Zinc-binding dehydrogenase 174 297 8.5E-27 T 25-04-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLFO_RS03820 cc2940de1ed168f201d8af4c029f9944 339 Gene3D G3DSA:3.90.180.10 1 164 8.3E-55 T 25-04-2017 IPR011032 GroES-like CLFO_RS03820 cc2940de1ed168f201d8af4c029f9944 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 7.6E-34 T 25-04-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLFO_RS03820 cc2940de1ed168f201d8af4c029f9944 339 SUPERFAMILY SSF50129 1 171 8.83E-51 T 25-04-2017 IPR011032 GroES-like CLFO_RS03820 cc2940de1ed168f201d8af4c029f9944 339 SMART SM00829 7 336 0.0029 T 25-04-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 Pfam PF01330 RuvA N terminal domain 2 61 7.0E-19 T 25-04-2017 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 SUPERFAMILY SSF50249 2 62 7.28E-14 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 SMART SM00278 72 91 350.0 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 SMART SM00278 107 126 0.08 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 SUPERFAMILY SSF46929 149 190 3.79E-10 T 25-04-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 Gene3D G3DSA:2.40.50.140 2 64 5.6E-20 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 Gene3D G3DSA:1.10.150.20 66 138 9.6E-28 T 25-04-2017 CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 Pfam PF14520 Helix-hairpin-helix domain 71 129 2.3E-17 T 25-04-2017 CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 3 190 1.4E-48 T 25-04-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 Pfam PF07499 RuvA, C-terminal domain 150 190 6.3E-14 T 25-04-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 191 29.477 T 25-04-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 Gene3D G3DSA:1.10.8.10 150 190 8.7E-14 T 25-04-2017 CLFO_RS08910 b2b50969bcb6cc808f969043cae9afc0 192 SUPERFAMILY SSF47781 65 136 4.45E-20 T 25-04-2017 IPR010994 RuvA domain 2-like CLFO_RS11260 2fc0beade29e17db3e410a1f16217a35 413 SUPERFAMILY SSF53901 2 251 8.33E-83 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS11260 2fc0beade29e17db3e410a1f16217a35 413 Gene3D G3DSA:3.40.47.10 262 412 6.8E-64 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS11260 2fc0beade29e17db3e410a1f16217a35 413 SMART SM00825 Beta-ketoacyl synthase 5 413 2.7E-16 T 25-04-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLFO_RS11260 2fc0beade29e17db3e410a1f16217a35 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 3.4E-204 T 25-04-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CLFO_RS11260 2fc0beade29e17db3e410a1f16217a35 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 7.8E-38 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS11260 2fc0beade29e17db3e410a1f16217a35 413 SUPERFAMILY SSF53901 214 411 1.38E-73 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS11260 2fc0beade29e17db3e410a1f16217a35 413 PIRSF PIRSF000447 1 413 7.5E-196 T 25-04-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CLFO_RS11260 2fc0beade29e17db3e410a1f16217a35 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 246 1.7E-65 T 25-04-2017 IPR014030 Beta-ketoacyl synthase, N-terminal CLFO_RS11260 2fc0beade29e17db3e410a1f16217a35 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 25-04-2017 IPR018201 Beta-ketoacyl synthase, active site CLFO_RS11260 2fc0beade29e17db3e410a1f16217a35 413 Gene3D G3DSA:3.40.47.10 2 257 1.4E-84 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS14930 1144f51be5373108e8208fa04725b9f2 476 Pfam PF02447 GntP family permease 7 471 2.2E-85 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS07565 6297549068989697def0f19f54ce71d1 199 Pfam PF01121 Dephospho-CoA kinase 3 183 1.0E-54 T 25-04-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 CLFO_RS07565 6297549068989697def0f19f54ce71d1 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 191 1.8E-56 T 25-04-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 CLFO_RS07565 6297549068989697def0f19f54ce71d1 199 Gene3D G3DSA:3.40.50.300 1 197 2.5E-72 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07565 6297549068989697def0f19f54ce71d1 199 SUPERFAMILY SSF52540 1 195 1.94E-40 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07565 6297549068989697def0f19f54ce71d1 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 199 26.748 T 25-04-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 CLFO_RS12505 0cc730c9fb590146924cddf3cc6ca5b4 197 PRINTS PR00773 GrpE protein signature 68 84 4.8E-25 T 25-04-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLFO_RS12505 0cc730c9fb590146924cddf3cc6ca5b4 197 PRINTS PR00773 GrpE protein signature 176 195 4.8E-25 T 25-04-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLFO_RS12505 0cc730c9fb590146924cddf3cc6ca5b4 197 PRINTS PR00773 GrpE protein signature 150 165 4.8E-25 T 25-04-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLFO_RS12505 0cc730c9fb590146924cddf3cc6ca5b4 197 PRINTS PR00773 GrpE protein signature 96 111 4.8E-25 T 25-04-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLFO_RS12505 0cc730c9fb590146924cddf3cc6ca5b4 197 Hamap MF_01151 Protein GrpE [grpE]. 9 197 19.801 T 25-04-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLFO_RS12505 0cc730c9fb590146924cddf3cc6ca5b4 197 Gene3D G3DSA:3.90.20.20 44 141 1.2E-28 T 25-04-2017 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CLFO_RS12505 0cc730c9fb590146924cddf3cc6ca5b4 197 SUPERFAMILY SSF58014 45 142 1.44E-26 T 25-04-2017 CLFO_RS12505 0cc730c9fb590146924cddf3cc6ca5b4 197 SUPERFAMILY SSF51064 143 197 9.02E-15 T 25-04-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CLFO_RS12505 0cc730c9fb590146924cddf3cc6ca5b4 197 Gene3D G3DSA:2.30.22.10 142 197 1.3E-23 T 25-04-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CLFO_RS12505 0cc730c9fb590146924cddf3cc6ca5b4 197 Pfam PF01025 GrpE 37 197 5.4E-50 T 25-04-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CLFO_RS16125 71cf7573d258bcad9a42b2389eb5ee87 423 PIRSF PIRSF006066 1 423 5.7E-154 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS16125 71cf7573d258bcad9a42b2389eb5ee87 423 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 417 7.8E-137 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS16125 71cf7573d258bcad9a42b2389eb5ee87 423 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 4 412 2.2E-113 T 25-04-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLFO_RS03905 2bf3be31514f8786948927284b58c850 653 SUPERFAMILY SSF55931 476 544 9.51E-57 T 25-04-2017 CLFO_RS03905 2bf3be31514f8786948927284b58c850 653 SUPERFAMILY SSF55931 177 449 9.51E-57 T 25-04-2017 CLFO_RS03905 2bf3be31514f8786948927284b58c850 653 Pfam PF00120 Glutamine synthetase, catalytic domain 178 451 1.5E-35 T 25-04-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS03905 2bf3be31514f8786948927284b58c850 653 Gene3D G3DSA:3.30.590.10 139 541 2.6E-69 T 25-04-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CLFO_RS03905 2bf3be31514f8786948927284b58c850 653 SMART SM01230 157 440 2.9E-35 T 25-04-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CLFO_RS18495 51e4607e5cfbb51fec263d1c59890b03 266 Pfam PF00809 Pterin binding enzyme 8 227 3.7E-29 T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS18495 51e4607e5cfbb51fec263d1c59890b03 266 SUPERFAMILY SSF51717 1 260 4.97E-80 T 25-04-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS18495 51e4607e5cfbb51fec263d1c59890b03 266 Gene3D G3DSA:3.20.20.20 1 260 6.5E-87 T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS19625 ac6d7b67acd160844c57ef6280d4f8d4 122 Gene3D G3DSA:3.30.420.100 24 122 5.5E-41 T 25-04-2017 CLFO_RS19625 ac6d7b67acd160844c57ef6280d4f8d4 122 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 122 8.4E-45 T 25-04-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19625 ac6d7b67acd160844c57ef6280d4f8d4 122 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 122 8.1E-49 T 25-04-2017 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19625 ac6d7b67acd160844c57ef6280d4f8d4 122 SUPERFAMILY SSF53137 7 120 9.53E-55 T 25-04-2017 CLFO_RS19625 ac6d7b67acd160844c57ef6280d4f8d4 122 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 122 29.088 T 25-04-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS08930 7ca26d5dd7ba75512c2ecffe842d7026 341 Gene3D G3DSA:2.40.10.240 64 144 7.2E-30 T 25-04-2017 CLFO_RS08930 7ca26d5dd7ba75512c2ecffe842d7026 341 Gene3D G3DSA:3.40.1780.10 1 62 1.4E-107 T 25-04-2017 CLFO_RS08930 7ca26d5dd7ba75512c2ecffe842d7026 341 Gene3D G3DSA:3.40.1780.10 178 340 1.4E-107 T 25-04-2017 CLFO_RS08930 7ca26d5dd7ba75512c2ecffe842d7026 341 Pfam PF02547 Queuosine biosynthesis protein 4 340 4.9E-149 T 25-04-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CLFO_RS08930 7ca26d5dd7ba75512c2ecffe842d7026 341 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 47.3 T 25-04-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CLFO_RS08930 7ca26d5dd7ba75512c2ecffe842d7026 341 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 9.0E-141 T 25-04-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CLFO_RS08930 7ca26d5dd7ba75512c2ecffe842d7026 341 SUPERFAMILY SSF111337 1 340 4.71E-143 T 25-04-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CLFO_RS03570 032e557c0d1111b564e25b6101b8a5c4 248 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 242 1.7E-34 T 25-04-2017 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CLFO_RS09195 ddb276c2e8ff5f68bea00e8ec391310a 183 Gene3D G3DSA:2.60.120.10 5 181 1.1E-80 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS09195 ddb276c2e8ff5f68bea00e8ec391310a 183 SUPERFAMILY SSF51182 4 181 7.65E-74 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS09195 ddb276c2e8ff5f68bea00e8ec391310a 183 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 6 180 2.3E-79 T 25-04-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CLFO_RS09195 ddb276c2e8ff5f68bea00e8ec391310a 183 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 4 180 1.0E-75 T 25-04-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CLFO_RS09195 ddb276c2e8ff5f68bea00e8ec391310a 183 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 179 3.7E-75 T 25-04-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CLFO_RS08330 c75c38cf27a574cf522e55b983f7e38f 410 Gene3D G3DSA:1.10.10.60 353 382 8.1E-7 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS08330 c75c38cf27a574cf522e55b983f7e38f 410 Pfam PF07905 Purine catabolism regulatory protein-like family 13 136 2.9E-31 T 25-04-2017 IPR012914 Purine catabolism PurC-like domain CLFO_RS08330 c75c38cf27a574cf522e55b983f7e38f 410 Pfam PF13556 PucR C-terminal helix-turn-helix domain 346 403 2.9E-22 T 25-04-2017 IPR025736 PucR C-terminal helix-turn-helix domain CLFO_RS04675 3bdcc6738e0d05b5fb53859cb9844dd0 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 203 4.8E-19 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS04675 3bdcc6738e0d05b5fb53859cb9844dd0 213 Gene3D G3DSA:1.10.10.10 153 207 8.7E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS04675 3bdcc6738e0d05b5fb53859cb9844dd0 213 Pfam PF00072 Response regulator receiver domain 7 118 2.0E-28 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS04675 3bdcc6738e0d05b5fb53859cb9844dd0 213 SUPERFAMILY SSF46894 147 208 4.08E-19 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS04675 3bdcc6738e0d05b5fb53859cb9844dd0 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 9.5E-13 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS04675 3bdcc6738e0d05b5fb53859cb9844dd0 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 9.5E-13 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS04675 3bdcc6738e0d05b5fb53859cb9844dd0 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 9.5E-13 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS04675 3bdcc6738e0d05b5fb53859cb9844dd0 213 SMART SM00421 148 205 2.6E-19 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS04675 3bdcc6738e0d05b5fb53859cb9844dd0 213 SUPERFAMILY SSF52172 4 135 1.85E-32 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS04675 3bdcc6738e0d05b5fb53859cb9844dd0 213 Gene3D G3DSA:3.40.50.2300 2 152 3.5E-36 T 25-04-2017 CLFO_RS04675 3bdcc6738e0d05b5fb53859cb9844dd0 213 SMART SM00448 5 118 2.8E-31 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS10240 2ce110f0aa53344602cffcd15d1b35b5 356 Gene3D G3DSA:1.10.1610.10 4 73 8.6E-29 T 25-04-2017 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CLFO_RS10240 2ce110f0aa53344602cffcd15d1b35b5 356 Gene3D G3DSA:3.40.50.10210 74 335 4.6E-112 T 25-04-2017 CLFO_RS10240 2ce110f0aa53344602cffcd15d1b35b5 356 Pfam PF02277 Phosphoribosyltransferase 12 352 5.9E-135 T 25-04-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CLFO_RS10240 2ce110f0aa53344602cffcd15d1b35b5 356 SUPERFAMILY SSF52733 7 353 1.03E-116 T 25-04-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CLFO_RS10240 2ce110f0aa53344602cffcd15d1b35b5 356 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 17 352 2.7E-134 T 25-04-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CLFO_RS10240 2ce110f0aa53344602cffcd15d1b35b5 356 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 14 354 35.186 T 25-04-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CLFO_RS13675 566782838741fb6b04f088d0e6e09e7f 160 PIRSF PIRSF006181 1 160 5.0E-57 T 25-04-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CLFO_RS13675 566782838741fb6b04f088d0e6e09e7f 160 Pfam PF04073 Aminoacyl-tRNA editing domain 36 147 2.1E-25 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS13675 566782838741fb6b04f088d0e6e09e7f 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 6 156 3.7E-55 T 25-04-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CLFO_RS13675 566782838741fb6b04f088d0e6e09e7f 160 Gene3D G3DSA:3.90.960.10 4 157 9.3E-50 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS13675 566782838741fb6b04f088d0e6e09e7f 160 SUPERFAMILY SSF55826 6 152 5.1E-39 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS18790 d8e32baf6e17fc8e51d561cccb4f1db0 271 Gene3D G3DSA:1.10.10.10 169 264 9.9E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18790 d8e32baf6e17fc8e51d561cccb4f1db0 271 Pfam PF08722 TnsA endonuclease N terminal 68 162 2.4E-23 T 25-04-2017 IPR014833 TnsA endonuclease, N-terminal CLFO_RS18790 d8e32baf6e17fc8e51d561cccb4f1db0 271 Pfam PF08721 TnsA endonuclease C terminal 167 248 2.6E-8 T 25-04-2017 IPR014832 TnsA endonuclease C-terminal CLFO_RS18790 d8e32baf6e17fc8e51d561cccb4f1db0 271 SUPERFAMILY SSF52980 9 164 3.91E-50 T 25-04-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLFO_RS18790 d8e32baf6e17fc8e51d561cccb4f1db0 271 Gene3D G3DSA:3.40.1350.10 5 163 4.6E-57 T 25-04-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 CLFO_RS18100 2077a69b7d864fdc2cda1e3068211c77 148 SUPERFAMILY SSF46785 4 62 4.17E-8 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18100 2077a69b7d864fdc2cda1e3068211c77 148 Pfam PF13404 AsnC-type helix-turn-helix domain 4 44 4.2E-7 T 25-04-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLFO_RS18100 2077a69b7d864fdc2cda1e3068211c77 148 Gene3D G3DSA:1.10.10.10 4 53 1.7E-9 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12805 ba7d27ba946a9a01a900d637839c47b7 73 SUPERFAMILY SSF143422 1 71 5.76E-21 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS12805 ba7d27ba946a9a01a900d637839c47b7 73 SMART SM01321 1 70 0.002 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS12805 ba7d27ba946a9a01a900d637839c47b7 73 Pfam PF01797 Transposase IS200 like 1 70 2.1E-20 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS12805 ba7d27ba946a9a01a900d637839c47b7 73 Gene3D G3DSA:3.30.70.1290 1 71 2.3E-22 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS02080 a1068b7c024ba94ced21efbd84a64104 404 SUPERFAMILY SSF53633 3 246 1.96E-69 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS02080 a1068b7c024ba94ced21efbd84a64104 404 SUPERFAMILY SSF55021 335 403 3.23E-14 T 25-04-2017 CLFO_RS02080 a1068b7c024ba94ced21efbd84a64104 404 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 25-04-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS02080 a1068b7c024ba94ced21efbd84a64104 404 Gene3D G3DSA:3.40.1160.10 2 246 5.1E-66 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS02080 a1068b7c024ba94ced21efbd84a64104 404 SUPERFAMILY SSF55021 263 346 2.12E-7 T 25-04-2017 CLFO_RS02080 a1068b7c024ba94ced21efbd84a64104 404 Pfam PF00696 Amino acid kinase family 2 235 4.7E-53 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS02080 a1068b7c024ba94ced21efbd84a64104 404 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 68 401 4.5E-90 T 25-04-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS02080 a1068b7c024ba94ced21efbd84a64104 404 PIRSF PIRSF000726 58 404 1.7E-85 T 25-04-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CLFO_RS02080 a1068b7c024ba94ced21efbd84a64104 404 Pfam PF13840 ACT domain 338 398 1.6E-18 T 25-04-2017 IPR027795 GATS-like ACT domain CLFO_RS15485 ee6e138f380a03d3622dffb6e914cabc 496 Pfam PF02652 L-lactate permease 5 293 1.3E-54 T 25-04-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CLFO_RS15485 ee6e138f380a03d3622dffb6e914cabc 496 Pfam PF02652 L-lactate permease 299 482 4.5E-38 T 25-04-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CLFO_RS09815 2b6645888519f5ad82451e008451bb1a 206 Pfam PF01944 Stage II sporulation protein M 19 195 1.5E-22 T 25-04-2017 IPR002798 Stage II sporulation protein M-like CLFO_RS09815 2b6645888519f5ad82451e008451bb1a 206 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 4 199 1.3E-46 T 25-04-2017 IPR014196 Stage II sporulation protein M CLFO_RS09815 2b6645888519f5ad82451e008451bb1a 206 PIRSF PIRSF038973 1 206 2.0E-61 T 25-04-2017 IPR014196 Stage II sporulation protein M CLFO_RS08415 589e27a46094feec697a50ab6daf114e 314 Pfam PF03116 NQR2, RnfD, RnfE family 7 311 5.6E-119 T 25-04-2017 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CLFO_RS08415 589e27a46094feec697a50ab6daf114e 314 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 10 312 4.5E-102 T 25-04-2017 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CLFO_RS08415 589e27a46094feec697a50ab6daf114e 314 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 5 313 25.888 T 25-04-2017 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CLFO_RS03130 6fdde952682eaae2cc155c70e1a6796e 500 SUPERFAMILY SSF56024 289 483 3.14E-44 T 25-04-2017 CLFO_RS03130 6fdde952682eaae2cc155c70e1a6796e 500 Gene3D G3DSA:3.30.870.10 131 333 4.3E-47 T 25-04-2017 CLFO_RS03130 6fdde952682eaae2cc155c70e1a6796e 500 Gene3D G3DSA:3.30.870.10 338 497 6.6E-36 T 25-04-2017 CLFO_RS03130 6fdde952682eaae2cc155c70e1a6796e 500 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 113 499 3.8E-116 T 25-04-2017 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CLFO_RS03130 6fdde952682eaae2cc155c70e1a6796e 500 SUPERFAMILY SSF56024 130 316 3.92E-46 T 25-04-2017 CLFO_RS03130 6fdde952682eaae2cc155c70e1a6796e 500 SMART SM00155 237 264 1.4E-5 T 25-04-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CLFO_RS03130 6fdde952682eaae2cc155c70e1a6796e 500 SMART SM00155 413 440 8.3E-6 T 25-04-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CLFO_RS03130 6fdde952682eaae2cc155c70e1a6796e 500 Pfam PF13091 PLD-like domain 154 297 1.4E-16 T 25-04-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 CLFO_RS03130 6fdde952682eaae2cc155c70e1a6796e 500 Pfam PF13091 PLD-like domain 342 465 2.0E-28 T 25-04-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 CLFO_RS13545 db53cd1f4a2b168ac0e2070ae73fbf70 229 Gene3D G3DSA:1.10.10.10 127 226 3.5E-35 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13545 db53cd1f4a2b168ac0e2070ae73fbf70 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.0E-26 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS13545 db53cd1f4a2b168ac0e2070ae73fbf70 229 SUPERFAMILY SSF46894 126 227 1.98E-31 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS13545 db53cd1f4a2b168ac0e2070ae73fbf70 229 Pfam PF00072 Response regulator receiver domain 6 115 5.2E-32 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13545 db53cd1f4a2b168ac0e2070ae73fbf70 229 SMART SM00862 150 225 3.6E-25 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS13545 db53cd1f4a2b168ac0e2070ae73fbf70 229 Gene3D G3DSA:3.40.50.2300 2 124 3.2E-43 T 25-04-2017 CLFO_RS13545 db53cd1f4a2b168ac0e2070ae73fbf70 229 SMART SM00448 4 114 4.7E-49 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13545 db53cd1f4a2b168ac0e2070ae73fbf70 229 SUPERFAMILY SSF52172 1 127 7.54E-44 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS04585 4e2a5f5910fd6a39e152e2a38908edbd 285 SUPERFAMILY SSF161098 69 260 2.94E-22 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04585 4e2a5f5910fd6a39e152e2a38908edbd 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 273 4.5E-18 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04585 4e2a5f5910fd6a39e152e2a38908edbd 285 Gene3D G3DSA:1.10.3720.10 68 273 1.3E-17 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS06970 a682874f55c980af24b337e11c11d0bf 355 Pfam PF00005 ABC transporter 18 161 3.6E-33 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS06970 a682874f55c980af24b337e11c11d0bf 355 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS06970 a682874f55c980af24b337e11c11d0bf 355 Gene3D G3DSA:3.40.50.300 18 231 2.2E-64 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06970 a682874f55c980af24b337e11c11d0bf 355 SMART SM00382 24 210 2.7E-13 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS06970 a682874f55c980af24b337e11c11d0bf 355 SUPERFAMILY SSF52540 6 240 3.64E-71 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00330 8d0f8df2347cec0598c2e46130617123 197 Hamap MF_00786 Probable cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) [cbiT]. 13 196 26.589 T 25-04-2017 IPR023475 Probable cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) CbiT GO:0008168 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CLFO_RS00330 8d0f8df2347cec0598c2e46130617123 197 Pfam PF13847 Methyltransferase domain 45 145 1.0E-10 T 25-04-2017 IPR025714 Methyltransferase domain CLFO_RS00330 8d0f8df2347cec0598c2e46130617123 197 SUPERFAMILY SSF53335 7 171 1.82E-28 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS00330 8d0f8df2347cec0598c2e46130617123 197 Gene3D G3DSA:3.40.50.150 16 196 2.0E-30 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS00330 8d0f8df2347cec0598c2e46130617123 197 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 23 145 5.9E-40 T 25-04-2017 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CLFO_RS02935 f01d31f74b81cdd0020d457a5036f71e 394 Gene3D G3DSA:3.40.50.970 3 249 3.7E-73 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS02935 f01d31f74b81cdd0020d457a5036f71e 394 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 261 364 6.1E-34 T 25-04-2017 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CLFO_RS02935 f01d31f74b81cdd0020d457a5036f71e 394 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 238 5.3E-63 T 25-04-2017 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CLFO_RS02935 f01d31f74b81cdd0020d457a5036f71e 394 SUPERFAMILY SSF52518 1 249 6.18E-61 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS02935 f01d31f74b81cdd0020d457a5036f71e 394 Gene3D G3DSA:3.40.50.920 252 378 7.5E-39 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS02935 f01d31f74b81cdd0020d457a5036f71e 394 SUPERFAMILY SSF52922 252 377 4.58E-34 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS00290 ba5ba08cb900712a15eb2bad570e4876 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 101.174 T 25-04-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CLFO_RS00290 ba5ba08cb900712a15eb2bad570e4876 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS00290 ba5ba08cb900712a15eb2bad570e4876 432 Pfam PF00202 Aminotransferase class-III 32 345 6.5E-74 T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS00290 ba5ba08cb900712a15eb2bad570e4876 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 427 5.3E-194 T 25-04-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CLFO_RS00290 ba5ba08cb900712a15eb2bad570e4876 432 SUPERFAMILY SSF53383 2 425 5.98E-129 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS00290 ba5ba08cb900712a15eb2bad570e4876 432 Gene3D G3DSA:3.90.1150.10 3 71 1.7E-44 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS00290 ba5ba08cb900712a15eb2bad570e4876 432 Gene3D G3DSA:3.90.1150.10 322 426 1.7E-44 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS00290 ba5ba08cb900712a15eb2bad570e4876 432 Gene3D G3DSA:3.40.640.10 72 319 2.6E-78 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS15760 1b57263ba776d057942ecd06e9934ef9 568 Pfam PF09818 Predicted ATPase of the ABC class 5 445 1.0E-191 T 25-04-2017 IPR019195 ABC transporter, ATPase, putative CLFO_RS15760 1b57263ba776d057942ecd06e9934ef9 568 SUPERFAMILY SSF52540 243 422 1.11E-7 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15760 1b57263ba776d057942ecd06e9934ef9 568 Gene3D G3DSA:3.40.50.300 246 416 3.1E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13000 315cdb281cac0c3f7b8daba2ba9e6adf 212 Pfam PF12822 Protein of unknown function (DUF3816) 33 184 4.5E-10 T 25-04-2017 IPR024529 ECF transporter, substrate-specific component GO:0005215 CLFO_RS13000 315cdb281cac0c3f7b8daba2ba9e6adf 212 PIRSF PIRSF037395 4 206 2.6E-51 T 25-04-2017 IPR017196 ECF transporter, predicted substrate-specific component UCP037395 CLFO_RS19990 fc4d5cad98f354bb36548e43287aab3d 326 Pfam PF02237 Biotin protein ligase C terminal domain 274 320 1.1E-6 T 25-04-2017 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS19990 fc4d5cad98f354bb36548e43287aab3d 326 Gene3D G3DSA:2.30.30.100 274 322 3.5E-10 T 25-04-2017 CLFO_RS19990 fc4d5cad98f354bb36548e43287aab3d 326 Gene3D G3DSA:3.30.930.10 71 256 2.7E-62 T 25-04-2017 CLFO_RS19990 fc4d5cad98f354bb36548e43287aab3d 326 Gene3D G3DSA:1.10.10.10 3 59 8.1E-22 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS19990 fc4d5cad98f354bb36548e43287aab3d 326 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 319 3.4E-63 T 25-04-2017 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS19990 fc4d5cad98f354bb36548e43287aab3d 326 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 4 320 35.915 T 25-04-2017 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 CLFO_RS19990 fc4d5cad98f354bb36548e43287aab3d 326 SUPERFAMILY SSF46785 6 58 1.65E-11 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS19990 fc4d5cad98f354bb36548e43287aab3d 326 Pfam PF08279 HTH domain 3 56 1.9E-15 T 25-04-2017 IPR013196 Helix-turn-helix, type 11 CLFO_RS19990 fc4d5cad98f354bb36548e43287aab3d 326 SUPERFAMILY SSF50037 275 320 1.37E-6 T 25-04-2017 IPR008988 Transcriptional repressor, C-terminal CLFO_RS19990 fc4d5cad98f354bb36548e43287aab3d 326 SUPERFAMILY SSF55681 68 257 1.19E-59 T 25-04-2017 CLFO_RS19990 fc4d5cad98f354bb36548e43287aab3d 326 Pfam PF03099 Biotin/lipoate A/B protein ligase family 86 209 2.6E-16 T 25-04-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CLFO_RS06780 f4624bc917a58f125401e64ac3c69ea2 119 Pfam PF04237 YjbR 11 102 5.0E-22 T 25-04-2017 IPR007351 Uncharacterised protein YjbR CLFO_RS06780 f4624bc917a58f125401e64ac3c69ea2 119 SUPERFAMILY SSF142906 1 116 1.05E-38 T 25-04-2017 CLFO_RS10660 56df2cd9c350c93284d2b30b2f506aa2 322 Pfam PF05343 M42 glutamyl aminopeptidase 35 311 1.0E-96 T 25-04-2017 IPR008007 Peptidase M42 CLFO_RS10660 56df2cd9c350c93284d2b30b2f506aa2 322 Gene3D G3DSA:2.40.30.40 60 138 1.5E-25 T 25-04-2017 IPR023367 Peptidase M42, domain 2 CLFO_RS10660 56df2cd9c350c93284d2b30b2f506aa2 322 PIRSF PIRSF001123 1 320 6.2E-105 T 25-04-2017 IPR008007 Peptidase M42 CLFO_RS10660 56df2cd9c350c93284d2b30b2f506aa2 322 SUPERFAMILY SSF101821 58 136 1.02E-18 T 25-04-2017 CLFO_RS10660 56df2cd9c350c93284d2b30b2f506aa2 322 Gene3D G3DSA:3.40.630.10 144 318 1.6E-81 T 25-04-2017 CLFO_RS10660 56df2cd9c350c93284d2b30b2f506aa2 322 Gene3D G3DSA:3.40.630.10 1 59 1.6E-81 T 25-04-2017 CLFO_RS10660 56df2cd9c350c93284d2b30b2f506aa2 322 SUPERFAMILY SSF53187 2 68 8.3E-66 T 25-04-2017 CLFO_RS10660 56df2cd9c350c93284d2b30b2f506aa2 322 SUPERFAMILY SSF53187 147 318 8.3E-66 T 25-04-2017 CLFO_RS04935 b674e30ca7e10845ef9b589ae27d27fa 118 SUPERFAMILY SSF81345 2 89 8.76E-19 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS04935 b674e30ca7e10845ef9b589ae27d27fa 118 Gene3D G3DSA:1.10.3470.10 89 115 1.1E-5 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS04935 b674e30ca7e10845ef9b589ae27d27fa 118 Gene3D G3DSA:1.10.3470.10 2 88 7.4E-25 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS04935 b674e30ca7e10845ef9b589ae27d27fa 118 Pfam PF01032 FecCD transport family 2 89 7.2E-22 T 25-04-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CLFO_RS09500 95847ed21549e3374e3791e0f024b183 267 SMART SM00382 36 224 1.1E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS09500 95847ed21549e3374e3791e0f024b183 267 Gene3D G3DSA:3.40.50.300 2 248 1.9E-72 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09500 95847ed21549e3374e3791e0f024b183 267 Pfam PF00005 ABC transporter 27 175 8.0E-34 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS09500 95847ed21549e3374e3791e0f024b183 267 SUPERFAMILY SSF52540 2 245 1.66E-63 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09500 95847ed21549e3374e3791e0f024b183 267 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS21110 1f9db4c6ef17d62db01f4cb468f4e580 666 Pfam PF01368 DHH family 351 506 1.5E-19 T 25-04-2017 IPR001667 DDH domain CLFO_RS21110 1f9db4c6ef17d62db01f4cb468f4e580 666 Pfam PF02272 DHHA1 domain 599 654 4.1E-8 T 25-04-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CLFO_RS21110 1f9db4c6ef17d62db01f4cb468f4e580 666 Gene3D G3DSA:3.90.1640.10 350 543 2.2E-38 T 25-04-2017 CLFO_RS21110 1f9db4c6ef17d62db01f4cb468f4e580 666 SUPERFAMILY SSF64182 350 652 1.18E-63 T 25-04-2017 CLFO_RS21110 1f9db4c6ef17d62db01f4cb468f4e580 666 Gene3D G3DSA:3.30.70.270 173 297 1.1E-4 T 25-04-2017 CLFO_RS21110 1f9db4c6ef17d62db01f4cb468f4e580 666 PIRSF PIRSF026583 1 666 3.3E-215 T 25-04-2017 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA CLFO_RS18480 ce1e7940132ee21c6c5df101208521e6 210 Pfam PF02607 B12 binding domain 5 77 1.2E-19 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS18480 ce1e7940132ee21c6c5df101208521e6 210 SUPERFAMILY SSF47644 2 80 1.57E-20 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS18480 ce1e7940132ee21c6c5df101208521e6 210 Gene3D G3DSA:3.40.50.280 76 210 1.1E-48 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS18480 ce1e7940132ee21c6c5df101208521e6 210 Gene3D G3DSA:1.10.1240.10 2 75 9.4E-20 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS18480 ce1e7940132ee21c6c5df101208521e6 210 SUPERFAMILY SSF52242 71 209 1.96E-43 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS18480 ce1e7940132ee21c6c5df101208521e6 210 SMART SM01018 1 84 1.0E-24 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS18480 ce1e7940132ee21c6c5df101208521e6 210 Pfam PF02310 B12 binding domain 90 201 3.3E-24 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS06315 3b6a80ac30072e41a0f8ae7866fe38fe 760 Gene3D G3DSA:3.30.365.10 369 459 1.8E-66 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS06315 3b6a80ac30072e41a0f8ae7866fe38fe 760 Gene3D G3DSA:3.30.365.10 613 759 1.8E-66 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS06315 3b6a80ac30072e41a0f8ae7866fe38fe 760 SUPERFAMILY SSF54665 2 147 7.72E-43 T 25-04-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLFO_RS06315 3b6a80ac30072e41a0f8ae7866fe38fe 760 Gene3D G3DSA:3.30.365.10 185 290 9.9E-36 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS06315 3b6a80ac30072e41a0f8ae7866fe38fe 760 SMART SM01008 18 130 2.1E-44 T 25-04-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLFO_RS06315 3b6a80ac30072e41a0f8ae7866fe38fe 760 Gene3D G3DSA:3.30.365.10 460 592 4.2E-43 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS06315 3b6a80ac30072e41a0f8ae7866fe38fe 760 Gene3D G3DSA:3.90.1170.50 2 118 2.5E-40 T 25-04-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLFO_RS06315 3b6a80ac30072e41a0f8ae7866fe38fe 760 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 162 697 1.4E-163 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS06315 3b6a80ac30072e41a0f8ae7866fe38fe 760 SUPERFAMILY SSF56003 122 758 4.45E-184 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS06315 3b6a80ac30072e41a0f8ae7866fe38fe 760 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 128 2.3E-30 T 25-04-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLFO_RS06315 3b6a80ac30072e41a0f8ae7866fe38fe 760 Gene3D G3DSA:3.30.365.10 292 367 1.1E-34 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS06315 3b6a80ac30072e41a0f8ae7866fe38fe 760 Gene3D G3DSA:3.30.365.10 119 184 1.1E-34 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS04375 3c0fa6acf9a7b16fdbf1d534f3cad3b4 296 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 86 295 1.5E-65 T 25-04-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CLFO_RS04375 3c0fa6acf9a7b16fdbf1d534f3cad3b4 296 SUPERFAMILY SSF56529 78 295 9.68E-73 T 25-04-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CLFO_RS04375 3c0fa6acf9a7b16fdbf1d534f3cad3b4 296 Gene3D G3DSA:3.90.850.10 79 295 2.9E-81 T 25-04-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CLFO_RS13855 a496aadde6af8f63ba220717e410f4fd 236 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 215 3.5E-59 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13855 a496aadde6af8f63ba220717e410f4fd 236 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 220 1.2E-57 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13855 a496aadde6af8f63ba220717e410f4fd 236 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 1 235 18.231 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13855 a496aadde6af8f63ba220717e410f4fd 236 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 79 97 2.4E-29 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13855 a496aadde6af8f63ba220717e410f4fd 236 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 97 123 2.4E-29 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13855 a496aadde6af8f63ba220717e410f4fd 236 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 2.4E-29 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13855 a496aadde6af8f63ba220717e410f4fd 236 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 148 176 2.4E-29 T 25-04-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CLFO_RS13160 3adeb028eda4cb9c44e96a07a3f58706 475 SMART SM00155 207 233 0.12 T 25-04-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CLFO_RS13160 3adeb028eda4cb9c44e96a07a3f58706 475 SMART SM00155 377 407 6.6 T 25-04-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CLFO_RS13160 3adeb028eda4cb9c44e96a07a3f58706 475 Gene3D G3DSA:3.30.870.10 208 251 2.9E-14 T 25-04-2017 CLFO_RS13160 3adeb028eda4cb9c44e96a07a3f58706 475 Gene3D G3DSA:3.30.870.10 288 442 3.1E-19 T 25-04-2017 CLFO_RS13160 3adeb028eda4cb9c44e96a07a3f58706 475 Gene3D G3DSA:3.30.870.10 65 157 2.9E-14 T 25-04-2017 CLFO_RS13160 3adeb028eda4cb9c44e96a07a3f58706 475 SUPERFAMILY SSF56024 203 254 7.53E-15 T 25-04-2017 CLFO_RS13160 3adeb028eda4cb9c44e96a07a3f58706 475 SUPERFAMILY SSF56024 65 163 7.53E-15 T 25-04-2017 CLFO_RS13160 3adeb028eda4cb9c44e96a07a3f58706 475 SUPERFAMILY SSF56024 293 441 9.42E-17 T 25-04-2017 CLFO_RS13160 3adeb028eda4cb9c44e96a07a3f58706 475 Pfam PF13091 PLD-like domain 303 439 1.9E-26 T 25-04-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 CLFO_RS09280 0e661e19974ba36e3898022b80769210 726 Gene3D G3DSA:3.40.720.10 134 344 1.1E-10 T 25-04-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLFO_RS09280 0e661e19974ba36e3898022b80769210 726 Gene3D G3DSA:3.40.720.10 36 91 1.1E-10 T 25-04-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLFO_RS09280 0e661e19974ba36e3898022b80769210 726 SUPERFAMILY SSF53649 141 337 9.81E-11 T 25-04-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLFO_RS09280 0e661e19974ba36e3898022b80769210 726 SUPERFAMILY SSF53649 35 92 9.81E-11 T 25-04-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLFO_RS12175 f216790f26f817f90bdbd61acf1c3ff1 273 SUPERFAMILY SSF53383 1 241 2.31E-65 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS12175 f216790f26f817f90bdbd61acf1c3ff1 273 Pfam PF00155 Aminotransferase class I and II 63 240 1.5E-29 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS12175 f216790f26f817f90bdbd61acf1c3ff1 273 Gene3D G3DSA:3.40.640.10 46 241 4.7E-53 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS13065 b83376f9672f67e820a6073e89651c83 217 SUPERFAMILY SSF110391 32 205 1.22E-51 T 25-04-2017 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CLFO_RS13065 b83376f9672f67e820a6073e89651c83 217 Gene3D G3DSA:3.20.20.400 25 207 1.3E-63 T 25-04-2017 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CLFO_RS13065 b83376f9672f67e820a6073e89651c83 217 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 32 205 5.1E-60 T 25-04-2017 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CLFO_RS13065 b83376f9672f67e820a6073e89651c83 217 PIRSF PIRSF016897 23 211 1.5E-65 T 25-04-2017 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CLFO_RS14570 5a1fc40f2001ca529391e499afa2e70a 290 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 114 6.8E-15 T 25-04-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CLFO_RS14570 5a1fc40f2001ca529391e499afa2e70a 290 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 290 113.059 T 25-04-2017 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CLFO_RS14570 5a1fc40f2001ca529391e499afa2e70a 290 Gene3D G3DSA:3.40.50.720 3 137 1.3E-63 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14570 5a1fc40f2001ca529391e499afa2e70a 290 SMART SM00859 5 117 1.2E-9 T 25-04-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CLFO_RS14570 5a1fc40f2001ca529391e499afa2e70a 290 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 286 4.9E-128 T 25-04-2017 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CLFO_RS14570 5a1fc40f2001ca529391e499afa2e70a 290 Gene3D G3DSA:3.30.360.10 138 263 7.5E-56 T 25-04-2017 CLFO_RS14570 5a1fc40f2001ca529391e499afa2e70a 290 SUPERFAMILY SSF55347 125 264 2.68E-53 T 25-04-2017 CLFO_RS14570 5a1fc40f2001ca529391e499afa2e70a 290 PIRSF PIRSF015689 1 290 1.4E-121 T 25-04-2017 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CLFO_RS14570 5a1fc40f2001ca529391e499afa2e70a 290 SUPERFAMILY SSF51735 3 149 4.84E-30 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14570 5a1fc40f2001ca529391e499afa2e70a 290 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 125 263 1.4E-56 T 25-04-2017 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CLFO_RS03385 3cc903282688b8df78b6eef818b16698 320 ProSitePatterns PS01125 ROK family signature. 135 162 - T 25-04-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLFO_RS03385 3cc903282688b8df78b6eef818b16698 320 Pfam PF00480 ROK family 3 312 7.2E-70 T 25-04-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLFO_RS03385 3cc903282688b8df78b6eef818b16698 320 Gene3D G3DSA:3.30.420.40 140 299 1.6E-51 T 25-04-2017 CLFO_RS03385 3cc903282688b8df78b6eef818b16698 320 SUPERFAMILY SSF53067 2 316 7.63E-67 T 25-04-2017 CLFO_RS03385 3cc903282688b8df78b6eef818b16698 320 Gene3D G3DSA:3.30.420.40 2 139 1.9E-42 T 25-04-2017 CLFO_RS03385 3cc903282688b8df78b6eef818b16698 320 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 4 314 8.1E-81 T 25-04-2017 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CLFO_RS05645 1b481dbfa88b5d458ad0186a54c8c0b4 708 Pfam PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit 297 452 1.0E-70 T 25-04-2017 IPR004461 CO dehydrogenase/acetyl-CoA synthase complex beta subunit GO:0006084|GO:0018492 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|KEGG: 00720+2.3.1.169|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CLFO_RS05645 1b481dbfa88b5d458ad0186a54c8c0b4 708 Gene3D G3DSA:3.30.1650.10 296 471 5.4E-74 T 25-04-2017 CLFO_RS05645 1b481dbfa88b5d458ad0186a54c8c0b4 708 SUPERFAMILY SSF56821 2 707 3.3E-232 T 25-04-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLFO_RS05645 1b481dbfa88b5d458ad0186a54c8c0b4 708 TIGRFAM TIGR00316 cdhC: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit 296 703 5.2E-133 T 25-04-2017 IPR004461 CO dehydrogenase/acetyl-CoA synthase complex beta subunit GO:0006084|GO:0018492 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|KEGG: 00720+2.3.1.169|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CLFO_RS05645 1b481dbfa88b5d458ad0186a54c8c0b4 708 Gene3D G3DSA:3.40.50.2030 103 288 5.7E-80 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS05645 1b481dbfa88b5d458ad0186a54c8c0b4 708 Gene3D G3DSA:3.40.970.20 473 563 1.4E-43 T 25-04-2017 CLFO_RS05645 1b481dbfa88b5d458ad0186a54c8c0b4 708 Gene3D G3DSA:1.10.8.190 1 101 3.7E-34 T 25-04-2017 CLFO_RS05645 1b481dbfa88b5d458ad0186a54c8c0b4 708 Gene3D G3DSA:3.40.1470.10 578 706 4.8E-52 T 25-04-2017 CLFO_RS01900 57b67d6e2a0d6cb6202f12dc63985f18 217 Gene3D G3DSA:3.40.225.10 2 201 3.4E-72 T 25-04-2017 IPR001303 Class II aldolase/adducin N-terminal CLFO_RS01900 57b67d6e2a0d6cb6202f12dc63985f18 217 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 3 178 4.9E-53 T 25-04-2017 IPR001303 Class II aldolase/adducin N-terminal CLFO_RS01900 57b67d6e2a0d6cb6202f12dc63985f18 217 SUPERFAMILY SSF53639 1 207 9.61E-66 T 25-04-2017 IPR001303 Class II aldolase/adducin N-terminal CLFO_RS01900 57b67d6e2a0d6cb6202f12dc63985f18 217 SMART SM01007 3 179 2.5E-66 T 25-04-2017 IPR001303 Class II aldolase/adducin N-terminal CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 527 7.5E-202 T 25-04-2017 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 281 7.2E-54 T 25-04-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 SUPERFAMILY SSF55021 444 525 2.01E-15 T 25-04-2017 CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 SUPERFAMILY SSF143548 320 449 4.97E-35 T 25-04-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 Gene3D G3DSA:3.30.70.260 447 524 5.7E-18 T 25-04-2017 CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 Gene3D G3DSA:3.40.50.720 107 282 1.9E-62 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 221 237 - T 25-04-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 143 170 - T 25-04-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 Gene3D G3DSA:3.30.1330.90 319 446 2.0E-44 T 25-04-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 192 214 - T 25-04-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 Gene3D G3DSA:3.40.50.720 2 106 1.2E-39 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 SUPERFAMILY SSF52283 1 133 2.65E-35 T 25-04-2017 CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 SUPERFAMILY SSF51735 100 282 2.15E-54 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 313 1.0E-36 T 25-04-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CLFO_RS18070 c9b11b2e1e2875a91db0e27e6fc7d77a 527 Pfam PF01842 ACT domain 456 517 1.9E-6 T 25-04-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CLFO_RS15985 1b8af12ca00d676a9f59eac7947498d6 209 PIRSF PIRSF000370 1 208 6.9E-66 T 25-04-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CLFO_RS15985 1b8af12ca00d676a9f59eac7947498d6 209 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 205 38.552 T 25-04-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CLFO_RS15985 1b8af12ca00d676a9f59eac7947498d6 209 SUPERFAMILY SSF102114 27 199 6.93E-20 T 25-04-2017 CLFO_RS15985 1b8af12ca00d676a9f59eac7947498d6 209 Pfam PF13394 4Fe-4S single cluster domain 22 114 8.7E-12 T 25-04-2017 CLFO_RS15985 1b8af12ca00d676a9f59eac7947498d6 209 Gene3D G3DSA:3.20.20.70 27 97 2.8E-19 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS15985 1b8af12ca00d676a9f59eac7947498d6 209 Pfam PF04055 Radical SAM superfamily 26 166 3.5E-15 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS06495 78daa5035fe34bab5b8852f2f7f0cce8 136 Pfam PF14464 Prokaryotic homologs of the JAB domain 9 110 2.2E-22 T 25-04-2017 IPR028090 JAB domain, prokaryotic CLFO_RS06495 78daa5035fe34bab5b8852f2f7f0cce8 136 Gene3D G3DSA:3.40.140.10 2 128 1.0E-30 T 25-04-2017 CLFO_RS06495 78daa5035fe34bab5b8852f2f7f0cce8 136 SUPERFAMILY SSF102712 2 126 8.76E-29 T 25-04-2017 CLFO_RS06495 78daa5035fe34bab5b8852f2f7f0cce8 136 SMART SM00232 1 125 9.6E-7 T 25-04-2017 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 CLFO_RS14965 606063370a76f819c7a144dcb62ea272 254 SUPERFAMILY SSF89082 163 253 1.83E-28 T 25-04-2017 IPR012925 TipAS antibiotic-recognition domain CLFO_RS14965 606063370a76f819c7a144dcb62ea272 254 Gene3D G3DSA:1.10.1660.10 3 116 6.2E-30 T 25-04-2017 CLFO_RS14965 606063370a76f819c7a144dcb62ea272 254 Pfam PF07739 TipAS antibiotic-recognition domain 135 249 5.6E-37 T 25-04-2017 IPR012925 TipAS antibiotic-recognition domain CLFO_RS14965 606063370a76f819c7a144dcb62ea272 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 5.7E-7 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS14965 606063370a76f819c7a144dcb62ea272 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 5.7E-7 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS14965 606063370a76f819c7a144dcb62ea272 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 5.7E-7 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS14965 606063370a76f819c7a144dcb62ea272 254 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.2E-17 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS14965 606063370a76f819c7a144dcb62ea272 254 SUPERFAMILY SSF46955 3 110 7.33E-29 T 25-04-2017 IPR009061 Putative DNA-binding domain CLFO_RS14965 606063370a76f819c7a144dcb62ea272 254 Gene3D G3DSA:1.10.490.50 165 251 2.5E-29 T 25-04-2017 IPR012925 TipAS antibiotic-recognition domain CLFO_RS14965 606063370a76f819c7a144dcb62ea272 254 SMART SM00422 3 72 6.8E-24 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS11475 f08cd24a6ec01b75de3bff5d5e0906d8 97 Gene3D G3DSA:3.30.1380.20 18 58 3.0E-4 T 25-04-2017 CLFO_RS09310 bc398f5df7c71a48ba728b9a7b52fee0 144 Gene3D G3DSA:1.10.10.10 7 87 2.0E-28 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09310 bc398f5df7c71a48ba728b9a7b52fee0 144 SUPERFAMILY SSF46785 8 141 8.16E-40 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09310 bc398f5df7c71a48ba728b9a7b52fee0 144 Pfam PF01475 Ferric uptake regulator family 14 136 2.0E-37 T 25-04-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CLFO_RS14805 d074cfd1e2fd278f8d95236f8ae154e5 231 Pfam PF01381 Helix-turn-helix 8 61 1.2E-10 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS14805 d074cfd1e2fd278f8d95236f8ae154e5 231 SUPERFAMILY SSF51306 111 226 6.45E-8 T 25-04-2017 IPR015927 Peptidase S24/S26A/S26B/S26C CLFO_RS14805 d074cfd1e2fd278f8d95236f8ae154e5 231 Gene3D G3DSA:2.10.109.10 135 226 4.6E-4 T 25-04-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain CLFO_RS14805 d074cfd1e2fd278f8d95236f8ae154e5 231 SUPERFAMILY SSF47413 2 66 1.46E-13 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS14805 d074cfd1e2fd278f8d95236f8ae154e5 231 Gene3D G3DSA:1.10.260.40 4 61 4.5E-13 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS14805 d074cfd1e2fd278f8d95236f8ae154e5 231 SMART SM00530 7 62 2.4E-12 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS06575 09b08dac4c67a65df95678987fecf3e2 250 SUPERFAMILY SSF55469 160 222 4.84E-7 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS06575 09b08dac4c67a65df95678987fecf3e2 250 SUPERFAMILY SSF55469 5 133 1.7E-13 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS06575 09b08dac4c67a65df95678987fecf3e2 250 Pfam PF14512 Putative TM nitroreductase 5 218 1.5E-45 T 25-04-2017 IPR029478 Putative nitroreductase TM1586 CLFO_RS06575 09b08dac4c67a65df95678987fecf3e2 250 Gene3D G3DSA:3.40.109.10 3 131 2.2E-28 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS06575 09b08dac4c67a65df95678987fecf3e2 250 Gene3D G3DSA:3.40.109.30 139 229 1.3E-14 T 25-04-2017 CLFO_RS18450 d3f2e44adbff26e2cabbdd2086f7ad96 417 Gene3D G3DSA:3.30.390.10 1 162 2.0E-81 T 25-04-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS18450 d3f2e44adbff26e2cabbdd2086f7ad96 417 TIGRFAM TIGR01502 B_methylAsp_ase: methylaspartate ammonia-lyase 2 412 1.3E-187 T 25-04-2017 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CLFO_RS18450 d3f2e44adbff26e2cabbdd2086f7ad96 417 SUPERFAMILY SSF54826 1 159 2.97E-60 T 25-04-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CLFO_RS18450 d3f2e44adbff26e2cabbdd2086f7ad96 417 PIRSF PIRSF017107 1 413 2.5E-199 T 25-04-2017 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CLFO_RS18450 d3f2e44adbff26e2cabbdd2086f7ad96 417 SUPERFAMILY SSF51604 165 412 1.03E-82 T 25-04-2017 IPR029065 Enolase C-terminal domain-like CLFO_RS18450 d3f2e44adbff26e2cabbdd2086f7ad96 417 Gene3D G3DSA:3.20.20.120 166 410 5.1E-67 T 25-04-2017 IPR029065 Enolase C-terminal domain-like CLFO_RS18450 d3f2e44adbff26e2cabbdd2086f7ad96 417 Pfam PF07476 Methylaspartate ammonia-lyase C-terminus 162 411 1.9E-121 T 25-04-2017 IPR022662 Methylaspartate ammonia-lyase, C-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CLFO_RS18450 d3f2e44adbff26e2cabbdd2086f7ad96 417 Pfam PF05034 Methylaspartate ammonia-lyase N-terminus 1 159 3.7E-77 T 25-04-2017 IPR022665 Methylaspartate ammonia-lyase, N-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CLFO_RS08890 5b5f3beac892a9f76e92147943eedfce 211 SUPERFAMILY SSF55469 1 210 1.7E-46 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS08890 5b5f3beac892a9f76e92147943eedfce 211 Pfam PF00881 Nitroreductase family 7 188 1.4E-39 T 25-04-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLFO_RS08890 5b5f3beac892a9f76e92147943eedfce 211 Gene3D G3DSA:3.40.109.10 1 210 3.8E-50 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS08865 cd9f0fceaa581a14a8dec26c95c20d8e 67 ProDom PD019268 UVIB BACTERIOCIN BHLA PLASMID ANTIBIOTIC HOLIN-LIKE PRECURSOR ANTIMICROBIAL SIGNAL PROPHAGE-DERIVED 1 67 2.0E-15 T 25-04-2017 IPR024405 Prophage protein BhlA/UviB CLFO_RS08865 cd9f0fceaa581a14a8dec26c95c20d8e 67 Pfam PF10960 BhlA holin family 1 63 2.3E-24 T 25-04-2017 IPR024405 Prophage protein BhlA/UviB CLFO_RS04205 aad87b6c4e8d0bfb48098cc4b26a2d64 377 Gene3D G3DSA:3.40.640.10 16 259 2.8E-50 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS04205 aad87b6c4e8d0bfb48098cc4b26a2d64 377 SUPERFAMILY SSF53383 2 362 7.58E-89 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS04205 aad87b6c4e8d0bfb48098cc4b26a2d64 377 PIRSF PIRSF000524 1 375 2.6E-98 T 25-04-2017 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 CLFO_RS04205 aad87b6c4e8d0bfb48098cc4b26a2d64 377 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 182 202 - T 25-04-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLFO_RS04205 aad87b6c4e8d0bfb48098cc4b26a2d64 377 Pfam PF00266 Aminotransferase class-V 30 322 1.2E-31 T 25-04-2017 IPR000192 Aminotransferase class V domain CLFO_RS04205 aad87b6c4e8d0bfb48098cc4b26a2d64 377 Gene3D G3DSA:3.90.1150.10 262 363 3.0E-26 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS12095 6c597272b136f50d41f863778ed738f0 343 SUPERFAMILY SSF51726 2 334 6.02E-64 T 25-04-2017 CLFO_RS12095 6c597272b136f50d41f863778ed738f0 343 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 334 3.7E-75 T 25-04-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CLFO_RS12095 6c597272b136f50d41f863778ed738f0 343 TIGRFAM TIGR01463 mtaA_cmuA: methyltransferase, MtaA/CmuA family 4 333 1.5E-72 T 25-04-2017 IPR006360 Methyltransferase MtaA/CmuA GO:0006730|GO:0008168 CLFO_RS12095 6c597272b136f50d41f863778ed738f0 343 Gene3D G3DSA:3.20.20.210 4 334 3.8E-61 T 25-04-2017 CLFO_RS21030 fd50c5aa7833dfe2eec27f24cb6f2e08 323 SMART SM00382 184 308 0.0023 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS21030 fd50c5aa7833dfe2eec27f24cb6f2e08 323 SUPERFAMILY SSF52540 164 314 1.13E-18 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21030 fd50c5aa7833dfe2eec27f24cb6f2e08 323 Gene3D G3DSA:3.40.50.300 121 314 2.0E-29 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21030 fd50c5aa7833dfe2eec27f24cb6f2e08 323 Pfam PF01695 IstB-like ATP binding protein 183 293 7.0E-17 T 25-04-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 CLFO_RS11600 4bb845b85395aa91a484d47ba6311323 492 PIRSF PIRSF007466 1 492 2.0E-252 T 25-04-2017 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 CLFO_RS11600 4bb845b85395aa91a484d47ba6311323 492 Gene3D G3DSA:3.40.50.300 16 232 1.2E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11600 4bb845b85395aa91a484d47ba6311323 492 SUPERFAMILY SSF52540 18 236 4.1E-14 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11600 4bb845b85395aa91a484d47ba6311323 492 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 1 492 5.8E-235 T 25-04-2017 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 CLFO_RS11600 4bb845b85395aa91a484d47ba6311323 492 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 1 492 9.2E-229 T 25-04-2017 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 CLFO_RS15495 b4339e4a2b7bcb8be02fb61a01638eee 313 SUPERFAMILY SSF51735 96 277 5.24E-50 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15495 b4339e4a2b7bcb8be02fb61a01638eee 313 Gene3D G3DSA:3.40.50.720 1 110 1.0E-11 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15495 b4339e4a2b7bcb8be02fb61a01638eee 313 SUPERFAMILY SSF52283 1 118 8.29E-14 T 25-04-2017 CLFO_RS15495 b4339e4a2b7bcb8be02fb61a01638eee 313 Gene3D G3DSA:3.40.50.720 111 276 1.4E-55 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15495 b4339e4a2b7bcb8be02fb61a01638eee 313 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 307 7.0E-11 T 25-04-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CLFO_RS15495 b4339e4a2b7bcb8be02fb61a01638eee 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 274 4.5E-55 T 25-04-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CLFO_RS18655 c162f2eadeecac430d489f46bfc1b20f 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.1E-15 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS18655 c162f2eadeecac430d489f46bfc1b20f 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.1E-15 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS18655 c162f2eadeecac430d489f46bfc1b20f 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.1E-15 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS18655 c162f2eadeecac430d489f46bfc1b20f 121 Gene3D G3DSA:1.10.10.10 2 85 6.4E-26 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18655 c162f2eadeecac430d489f46bfc1b20f 121 SMART SM00418 6 84 1.8E-20 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS18655 c162f2eadeecac430d489f46bfc1b20f 121 SUPERFAMILY SSF46785 1 107 1.59E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18655 c162f2eadeecac430d489f46bfc1b20f 121 Pfam PF01022 Bacterial regulatory protein, arsR family 13 57 1.1E-12 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS21065 dec96d3866aa65d7b936c089902296fc 288 SMART SM00387 170 279 3.6E-15 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS21065 dec96d3866aa65d7b936c089902296fc 288 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 75 132 1.6E-11 T 25-04-2017 CLFO_RS21065 dec96d3866aa65d7b936c089902296fc 288 SUPERFAMILY SSF55874 139 276 2.49E-21 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS21065 dec96d3866aa65d7b936c089902296fc 288 Gene3D G3DSA:3.30.565.10 141 278 2.2E-22 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS21065 dec96d3866aa65d7b936c089902296fc 288 Pfam PF14501 GHKL domain 174 272 8.3E-19 T 25-04-2017 IPR032834 Sensor histidine kinase NatK, C-terminal domain CLFO_RS21065 dec96d3866aa65d7b936c089902296fc 288 Gene3D G3DSA:1.10.287.130 67 133 1.3E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS03490 dff257a6da7877b6f86dd35cd5603737 400 Pfam PF01609 Transposase DDE domain 104 349 5.6E-14 T 25-04-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS03490 dff257a6da7877b6f86dd35cd5603737 400 SUPERFAMILY SSF53098 57 355 1.29E-23 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS11950 ae1ad00aa2de880a333a19c70c472c39 429 Pfam PF05140 ResB-like family 352 421 1.7E-6 T 25-04-2017 IPR007816 ResB-like domain CLFO_RS11950 ae1ad00aa2de880a333a19c70c472c39 429 Pfam PF05140 ResB-like family 17 330 1.3E-51 T 25-04-2017 IPR007816 ResB-like domain CLFO_RS06605 5f5bbbc43533ca5e24d78650688c22dc 450 Pfam PF00202 Aminotransferase class-III 23 442 1.2E-133 T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS06605 5f5bbbc43533ca5e24d78650688c22dc 450 PIRSF PIRSF000521 28 443 1.8E-34 T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS06605 5f5bbbc43533ca5e24d78650688c22dc 450 Gene3D G3DSA:3.40.640.10 63 339 8.4E-93 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS06605 5f5bbbc43533ca5e24d78650688c22dc 450 SUPERFAMILY SSF53383 7 442 3.06E-131 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS06605 5f5bbbc43533ca5e24d78650688c22dc 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS06605 5f5bbbc43533ca5e24d78650688c22dc 450 Gene3D G3DSA:3.90.1150.10 341 443 8.8E-54 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS06605 5f5bbbc43533ca5e24d78650688c22dc 450 Gene3D G3DSA:3.90.1150.10 3 62 8.8E-54 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS06605 5f5bbbc43533ca5e24d78650688c22dc 450 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 445 50.169 T 25-04-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CLFO_RS06605 5f5bbbc43533ca5e24d78650688c22dc 450 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 12 442 1.7E-177 T 25-04-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CLFO_RS11970 f052aa760d651bf1c3a452ea37625d02 430 Gene3D G3DSA:3.10.580.10 287 403 9.2E-6 T 25-04-2017 CLFO_RS11970 f052aa760d651bf1c3a452ea37625d02 430 Pfam PF00563 EAL domain 13 243 5.5E-54 T 25-04-2017 IPR001633 EAL domain CLFO_RS11970 f052aa760d651bf1c3a452ea37625d02 430 SUPERFAMILY SSF54631 286 403 5.78E-6 T 25-04-2017 CLFO_RS11970 f052aa760d651bf1c3a452ea37625d02 430 SUPERFAMILY SSF141868 16 243 5.49E-62 T 25-04-2017 IPR001633 EAL domain CLFO_RS11970 f052aa760d651bf1c3a452ea37625d02 430 Gene3D G3DSA:3.20.20.450 16 244 1.6E-53 T 25-04-2017 IPR001633 EAL domain CLFO_RS11970 f052aa760d651bf1c3a452ea37625d02 430 SMART SM00052 6 248 9.5E-33 T 25-04-2017 IPR001633 EAL domain CLFO_RS08740 291ac896198d9f60b55fd023d20e41a2 195 Pfam PF01541 GIY-YIG catalytic domain 10 91 1.5E-7 T 25-04-2017 IPR000305 GIY-YIG nuclease superfamily CLFO_RS08740 291ac896198d9f60b55fd023d20e41a2 195 SUPERFAMILY SSF82771 10 98 7.85E-10 T 25-04-2017 IPR000305 GIY-YIG nuclease superfamily CLFO_RS08740 291ac896198d9f60b55fd023d20e41a2 195 Gene3D G3DSA:3.40.1440.10 9 90 6.6E-14 T 25-04-2017 IPR027299 GIY-YIG domain CLFO_RS08740 291ac896198d9f60b55fd023d20e41a2 195 SMART SM00465 9 101 1.7E-4 T 25-04-2017 IPR000305 GIY-YIG nuclease superfamily CLFO_RS07230 a8669678b0b05e1df07ee0f2ec3bb4ff 56 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 56 1.7E-21 T 25-04-2017 IPR009242 Protein of unknown function DUF896 CLFO_RS07230 a8669678b0b05e1df07ee0f2ec3bb4ff 56 SUPERFAMILY SSF158221 1 42 1.83E-13 T 25-04-2017 CLFO_RS07230 a8669678b0b05e1df07ee0f2ec3bb4ff 56 Hamap MF_01103 UPF0291 protein . 2 56 12.814 T 25-04-2017 IPR009242 Protein of unknown function DUF896 CLFO_RS07230 a8669678b0b05e1df07ee0f2ec3bb4ff 56 Gene3D G3DSA:1.10.287.540 1 56 3.3E-24 T 25-04-2017 IPR023218 UPF0291 structural domain CLFO_RS00430 2a4518411e53475f9b27f767dd96b15e 176 Pfam PF07670 Nucleoside recognition 47 146 2.3E-6 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS19295 71c9bb79872bbb78e3631cdbe6bbdfc2 154 SUPERFAMILY SSF52121 3 153 3.79E-64 T 25-04-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS19295 71c9bb79872bbb78e3631cdbe6bbdfc2 154 Gene3D G3DSA:3.40.50.960 1 153 5.4E-68 T 25-04-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS19295 71c9bb79872bbb78e3631cdbe6bbdfc2 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 32.095 T 25-04-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS19295 71c9bb79872bbb78e3631cdbe6bbdfc2 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 150 3.5E-59 T 25-04-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS19295 71c9bb79872bbb78e3631cdbe6bbdfc2 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 149 1.1E-59 T 25-04-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS10635 8be4d545f45caa729c2f8ff6bc16bd42 566 SMART SM00857 4 152 2.0E-52 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS10635 8be4d545f45caa729c2f8ff6bc16bd42 566 Pfam PF00239 Resolvase, N terminal domain 4 150 1.1E-34 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS10635 8be4d545f45caa729c2f8ff6bc16bd42 566 SUPERFAMILY SSF53041 3 152 1.57E-38 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS10635 8be4d545f45caa729c2f8ff6bc16bd42 566 Gene3D G3DSA:3.40.50.1390 3 134 1.3E-34 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS10635 8be4d545f45caa729c2f8ff6bc16bd42 566 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 25-04-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CLFO_RS10635 8be4d545f45caa729c2f8ff6bc16bd42 566 Pfam PF07508 Recombinase 174 275 5.9E-27 T 25-04-2017 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CLFO_RS01665 e3306b62b9bcc237dc09aa8b43d98d2f 159 SUPERFAMILY SSF140566 16 127 6.54E-6 T 25-04-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CLFO_RS01665 e3306b62b9bcc237dc09aa8b43d98d2f 159 Gene3D G3DSA:1.20.58.300 17 124 8.7E-4 T 25-04-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CLFO_RS01665 e3306b62b9bcc237dc09aa8b43d98d2f 159 Pfam PF05130 FlgN protein 5 144 7.6E-12 T 25-04-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CLFO_RS19530 8da3cbb68fb316dd89ccdccda9af6224 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.334 T 25-04-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19530 8da3cbb68fb316dd89ccdccda9af6224 142 SUPERFAMILY SSF52161 1 140 7.19E-58 T 25-04-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19530 8da3cbb68fb316dd89ccdccda9af6224 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 142 1.3E-62 T 25-04-2017 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19530 8da3cbb68fb316dd89ccdccda9af6224 142 Pfam PF00572 Ribosomal protein L13 14 138 4.7E-56 T 25-04-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19530 8da3cbb68fb316dd89ccdccda9af6224 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 25-04-2017 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CLFO_RS19530 8da3cbb68fb316dd89ccdccda9af6224 142 Gene3D G3DSA:3.90.1180.10 4 141 1.4E-62 T 25-04-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19530 8da3cbb68fb316dd89ccdccda9af6224 142 PIRSF PIRSF002181 1 142 3.9E-50 T 25-04-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CLFO_RS17990 c255850b771d2983128b5112c5fcf4a1 191 Gene3D G3DSA:3.40.50.2020 1 189 6.8E-55 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS17990 c255850b771d2983128b5112c5fcf4a1 191 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 38.926 T 25-04-2017 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 CLFO_RS17990 c255850b771d2983128b5112c5fcf4a1 191 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 190 2.9E-68 T 25-04-2017 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 CLFO_RS17990 c255850b771d2983128b5112c5fcf4a1 191 SUPERFAMILY SSF53271 1 188 9.51E-42 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS17990 c255850b771d2983128b5112c5fcf4a1 191 Pfam PF00156 Phosphoribosyl transferase domain 43 157 4.2E-9 T 25-04-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLFO_RS02525 1ef3b66c4f9da335339f3111a9d6a22c 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 117 9.3E-32 T 25-04-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CLFO_RS02525 1ef3b66c4f9da335339f3111a9d6a22c 227 Gene3D G3DSA:1.10.3720.10 19 223 3.4E-55 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS02525 1ef3b66c4f9da335339f3111a9d6a22c 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 209 3.2E-23 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS02525 1ef3b66c4f9da335339f3111a9d6a22c 227 SUPERFAMILY SSF161098 21 211 5.23E-49 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS20055 e909da2ccd5b4462993cb9ea4b5b50b7 361 Pfam PF01966 HD domain 135 258 4.2E-14 T 25-04-2017 IPR006674 HD domain CLFO_RS20055 e909da2ccd5b4462993cb9ea4b5b50b7 361 SMART SM00471 131 267 7.1E-11 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS20055 e909da2ccd5b4462993cb9ea4b5b50b7 361 Gene3D G3DSA:1.10.3210.10 131 297 6.7E-21 T 25-04-2017 IPR006674 HD domain CLFO_RS20055 e909da2ccd5b4462993cb9ea4b5b50b7 361 SUPERFAMILY SSF109604 131 295 2.9E-34 T 25-04-2017 CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 1.3E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 1.3E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 392 1.3E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.3E-13 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 Gene3D G3DSA:1.10.287.130 206 261 3.7E-20 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 Gene3D G3DSA:3.40.50.2300 605 727 3.6E-42 T 25-04-2017 CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 SMART SM00387 323 439 3.4E-38 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 Gene3D G3DSA:3.30.565.10 262 438 4.6E-44 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 SMART SM00448 606 723 1.3E-37 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 437 7.6E-29 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 Pfam PF00072 Response regulator receiver domain 608 723 2.9E-26 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 SUPERFAMILY SSF52172 606 728 2.13E-36 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 SUPERFAMILY SSF47384 198 277 3.34E-23 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 SMART SM00388 211 276 1.5E-26 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 SUPERFAMILY SSF55874 265 436 2.88E-45 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 SUPERFAMILY SSF52172 452 578 2.11E-5 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS15645 87f7674673fed5f4b5e58758bb731ad9 728 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 276 5.0E-21 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS04800 939a4736546b567f8b3e6c4ae0344f74 397 Pfam PF08659 KR domain 213 397 1.1E-59 T 25-04-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04800 939a4736546b567f8b3e6c4ae0344f74 397 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 292 303 1.9E-5 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS04800 939a4736546b567f8b3e6c4ae0344f74 397 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 231 1.9E-5 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS04800 939a4736546b567f8b3e6c4ae0344f74 397 Gene3D G3DSA:3.40.50.720 211 396 1.2E-53 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04800 939a4736546b567f8b3e6c4ae0344f74 397 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 213 396 1.5E-46 T 25-04-2017 CLFO_RS04800 939a4736546b567f8b3e6c4ae0344f74 397 SUPERFAMILY SSF51735 209 380 2.5E-39 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14240 cb1b8240e5b885dce416414bac58b93f 339 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 261 267 5.2E-31 T 25-04-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLFO_RS14240 cb1b8240e5b885dce416414bac58b93f 339 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 81 93 5.2E-31 T 25-04-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLFO_RS14240 cb1b8240e5b885dce416414bac58b93f 339 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 67 80 5.2E-31 T 25-04-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLFO_RS14240 cb1b8240e5b885dce416414bac58b93f 339 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 175 188 5.2E-31 T 25-04-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLFO_RS14240 cb1b8240e5b885dce416414bac58b93f 339 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 193 206 5.2E-31 T 25-04-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLFO_RS14240 cb1b8240e5b885dce416414bac58b93f 339 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 112 126 5.2E-31 T 25-04-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLFO_RS14240 cb1b8240e5b885dce416414bac58b93f 339 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 128 146 5.2E-31 T 25-04-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CLFO_RS14240 cb1b8240e5b885dce416414bac58b93f 339 SUPERFAMILY SSF56672 64 261 6.0E-11 T 25-04-2017 CLFO_RS14240 cb1b8240e5b885dce416414bac58b93f 339 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 72 263 5.4E-24 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS11335 31d54568bf839473c2e5c2479643e1a2 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 25-04-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLFO_RS11335 31d54568bf839473c2e5c2479643e1a2 187 SUPERFAMILY SSF53335 1 180 1.22E-49 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11335 31d54568bf839473c2e5c2479643e1a2 187 PIRSF PIRSF004553 1 184 2.2E-52 T 25-04-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS11335 31d54568bf839473c2e5c2479643e1a2 187 Gene3D G3DSA:3.40.50.150 1 184 1.3E-60 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11335 31d54568bf839473c2e5c2479643e1a2 187 Pfam PF03602 Conserved hypothetical protein 95 1 181 3.2E-55 T 25-04-2017 CLFO_RS11335 31d54568bf839473c2e5c2479643e1a2 187 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 182 7.9E-51 T 25-04-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS20310 e1e4241c7adb680889c0526cd606c1a0 495 Pfam PF00209 Sodium:neurotransmitter symporter family 5 119 9.5E-26 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS20310 e1e4241c7adb680889c0526cd606c1a0 495 Pfam PF00209 Sodium:neurotransmitter symporter family 152 455 1.4E-36 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS20310 e1e4241c7adb680889c0526cd606c1a0 495 SUPERFAMILY SSF161070 5 476 5.36E-112 T 25-04-2017 CLFO_RS20310 e1e4241c7adb680889c0526cd606c1a0 495 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 1.0E-13 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS20310 e1e4241c7adb680889c0526cd606c1a0 495 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 1.0E-13 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS20310 e1e4241c7adb680889c0526cd606c1a0 495 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 307 326 1.0E-13 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS20310 e1e4241c7adb680889c0526cd606c1a0 495 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 1.0E-13 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS14855 265e1809bc809cbaf46278ef4bfc9016 87 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 16 85 2.9E-16 T 25-04-2017 IPR008792 Coenzyme PQQ synthesis D CLFO_RS08550 75af6317279f18921fd86ac5e153c5a8 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 1.1E-25 T 25-04-2017 IPR017924 RNA-binding protein YhbY GO:0003723 CLFO_RS08550 75af6317279f18921fd86ac5e153c5a8 98 Gene3D G3DSA:3.30.110.60 1 95 1.5E-28 T 25-04-2017 IPR001890 RNA-binding, CRM domain GO:0003723 CLFO_RS08550 75af6317279f18921fd86ac5e153c5a8 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 2.0E-25 T 25-04-2017 IPR001890 RNA-binding, CRM domain GO:0003723 CLFO_RS08550 75af6317279f18921fd86ac5e153c5a8 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 6.0E-20 T 25-04-2017 IPR001890 RNA-binding, CRM domain GO:0003723 CLFO_RS08550 75af6317279f18921fd86ac5e153c5a8 98 SUPERFAMILY SSF75471 1 95 5.49E-28 T 25-04-2017 IPR001890 RNA-binding, CRM domain GO:0003723 CLFO_RS08550 75af6317279f18921fd86ac5e153c5a8 98 SMART SM01103 2 85 7.7E-35 T 25-04-2017 IPR001890 RNA-binding, CRM domain GO:0003723 CLFO_RS16145 3d9c6797f260785108d2c917565556e0 455 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 41 394 9.0E-30 T 25-04-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CLFO_RS16145 3d9c6797f260785108d2c917565556e0 455 Gene3D G3DSA:3.20.20.70 29 429 1.3E-78 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS16145 3d9c6797f260785108d2c917565556e0 455 SUPERFAMILY SSF51395 31 425 2.82E-63 T 25-04-2017 CLFO_RS01095 e1d30ce09b60334c63d6e509e0af15f2 145 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 142 32.427 T 25-04-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CLFO_RS01095 e1d30ce09b60334c63d6e509e0af15f2 145 SUPERFAMILY SSF54637 5 144 8.2E-50 T 25-04-2017 IPR029069 HotDog domain CLFO_RS01095 e1d30ce09b60334c63d6e509e0af15f2 145 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 3 139 1.4E-55 T 25-04-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CLFO_RS01095 e1d30ce09b60334c63d6e509e0af15f2 145 Pfam PF07977 FabA-like domain 12 134 2.0E-35 T 25-04-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CLFO_RS01095 e1d30ce09b60334c63d6e509e0af15f2 145 Gene3D G3DSA:3.10.129.10 2 142 1.8E-58 T 25-04-2017 IPR029069 HotDog domain CLFO_RS16295 630dff1928d02aa007c887139bd70fa5 245 Pfam PF10263 SprT-like family 46 179 2.9E-6 T 25-04-2017 IPR006640 SprT-like CLFO_RS00925 11e5b139280f35f3fbb07258b9ee2ba8 357 SMART SM00937 63 178 1.8E-64 T 25-04-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CLFO_RS00925 11e5b139280f35f3fbb07258b9ee2ba8 357 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 227 243 - T 25-04-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLFO_RS00925 11e5b139280f35f3fbb07258b9ee2ba8 357 Gene3D G3DSA:1.20.58.410 4 92 1.5E-15 T 25-04-2017 CLFO_RS00925 11e5b139280f35f3fbb07258b9ee2ba8 357 Pfam PF03462 PCRF domain 8 203 9.9E-75 T 25-04-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CLFO_RS00925 11e5b139280f35f3fbb07258b9ee2ba8 357 Pfam PF00472 RF-1 domain 211 320 1.9E-42 T 25-04-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLFO_RS00925 11e5b139280f35f3fbb07258b9ee2ba8 357 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 3.3E-168 T 25-04-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CLFO_RS00925 11e5b139280f35f3fbb07258b9ee2ba8 357 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 356 41.397 T 25-04-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CLFO_RS00925 11e5b139280f35f3fbb07258b9ee2ba8 357 Gene3D G3DSA:3.30.160.20 210 288 3.0E-33 T 25-04-2017 IPR014720 Double-stranded RNA-binding domain CLFO_RS00925 11e5b139280f35f3fbb07258b9ee2ba8 357 SUPERFAMILY SSF75620 8 352 1.83E-137 T 25-04-2017 CLFO_RS20290 467cfcaf631d63240e79b77088b89227 658 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 449 649 5.0E-45 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS20290 467cfcaf631d63240e79b77088b89227 658 SMART SM00283 382 657 1.3E-59 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS20290 467cfcaf631d63240e79b77088b89227 658 SUPERFAMILY SSF103190 91 189 7.26E-13 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS20290 467cfcaf631d63240e79b77088b89227 658 SUPERFAMILY SSF58104 388 656 1.44E-67 T 25-04-2017 CLFO_RS20290 467cfcaf631d63240e79b77088b89227 658 SUPERFAMILY SSF58104 321 355 1.44E-67 T 25-04-2017 CLFO_RS20290 467cfcaf631d63240e79b77088b89227 658 Pfam PF00672 HAMP domain 283 349 1.8E-12 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS20290 467cfcaf631d63240e79b77088b89227 658 Gene3D G3DSA:1.10.287.950 397 614 5.0E-48 T 25-04-2017 CLFO_RS20290 467cfcaf631d63240e79b77088b89227 658 Gene3D G3DSA:3.30.450.20 80 179 3.4E-27 T 25-04-2017 CLFO_RS20290 467cfcaf631d63240e79b77088b89227 658 SMART SM00304 598 654 66.0 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS20290 467cfcaf631d63240e79b77088b89227 658 SMART SM00304 301 353 7.2E-8 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS20290 467cfcaf631d63240e79b77088b89227 658 Pfam PF02743 Cache domain 36 263 1.9E-37 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS03250 6ac87b7321fd9ed9302576eaaf18f20d 188 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 14 186 2.1E-69 T 25-04-2017 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CLFO_RS03250 6ac87b7321fd9ed9302576eaaf18f20d 188 PIRSF PIRSF016897 3 188 8.5E-72 T 25-04-2017 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CLFO_RS03250 6ac87b7321fd9ed9302576eaaf18f20d 188 SUPERFAMILY SSF110391 13 187 1.83E-62 T 25-04-2017 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CLFO_RS03250 6ac87b7321fd9ed9302576eaaf18f20d 188 Gene3D G3DSA:3.20.20.400 4 188 9.2E-73 T 25-04-2017 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CLFO_RS13220 df29f8253d0ecd7b16419e9093732861 111 Gene3D G3DSA:3.20.80.10 22 89 5.1E-6 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS00670 aff566f02103b1e680a1cb43efd39ed7 377 SUPERFAMILY SSF56954 4 365 2.49E-29 T 25-04-2017 CLFO_RS00670 aff566f02103b1e680a1cb43efd39ed7 377 Pfam PF02321 Outer membrane efflux protein 249 367 5.0E-10 T 25-04-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CLFO_RS00670 aff566f02103b1e680a1cb43efd39ed7 377 Pfam PF02321 Outer membrane efflux protein 105 209 4.7E-5 T 25-04-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CLFO_RS00670 aff566f02103b1e680a1cb43efd39ed7 377 Gene3D G3DSA:1.20.1600.10 51 357 1.6E-18 T 25-04-2017 CLFO_RS18375 899039ff2e2caaac3824ad2b431d86f2 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 1.4E-44 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS18375 899039ff2e2caaac3824ad2b431d86f2 311 SUPERFAMILY SSF161098 93 295 3.79E-20 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS18375 899039ff2e2caaac3824ad2b431d86f2 311 Gene3D G3DSA:1.10.3720.10 92 304 4.5E-21 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 197 208 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 Gene3D G3DSA:4.10.260.20 522 580 1.4E-23 T 25-04-2017 IPR003149 Iron hydrogenase, small subunit CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 SMART SM00902 520 579 2.2E-25 T 25-04-2017 IPR003149 Iron hydrogenase, small subunit CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 Pfam PF00037 4Fe-4S binding domain 194 213 5.5E-6 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 Gene3D G3DSA:3.30.70.20 137 203 4.5E-11 T 25-04-2017 CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 84 9.6E-20 T 25-04-2017 CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 SUPERFAMILY SSF53920 197 575 3.4E-133 T 25-04-2017 IPR009016 Iron hydrogenase CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 230 514 6.5E-98 T 25-04-2017 IPR004108 Iron hydrogenase, large subunit, C-terminal CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 147 518 1.7E-160 T 25-04-2017 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 Gene3D G3DSA:3.40.50.1780 204 255 3.5E-74 T 25-04-2017 CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 Gene3D G3DSA:3.40.50.1780 307 437 3.5E-74 T 25-04-2017 CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 SUPERFAMILY SSF54862 84 221 4.18E-35 T 25-04-2017 CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 SMART SM00929 91 131 3.0E-18 T 25-04-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 Pfam PF02256 Iron hydrogenase small subunit 523 577 8.7E-24 T 25-04-2017 IPR003149 Iron hydrogenase, small subunit CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 91 129 2.1E-16 T 25-04-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 SUPERFAMILY SSF54292 5 82 2.28E-17 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS02130 a07574f4eb4d54c3c37bea7c7075e8bf 581 Gene3D G3DSA:3.10.20.30 5 62 1.5E-7 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS20560 5479d30c60a6499ea54375e3a5be5156 302 Gene3D G3DSA:3.20.20.140 2 288 2.6E-50 T 25-04-2017 CLFO_RS20560 5479d30c60a6499ea54375e3a5be5156 302 SUPERFAMILY SSF51556 2 291 3.65E-45 T 25-04-2017 IPR032466 Metal-dependent hydrolase CLFO_RS20560 5479d30c60a6499ea54375e3a5be5156 302 Pfam PF01979 Amidohydrolase family 2 289 6.7E-14 T 25-04-2017 IPR006680 Amidohydrolase-related GO:0016787 CLFO_RS00695 c824242359c8661623d61ee2fceb12ed 183 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 178 1.2E-77 T 25-04-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CLFO_RS00695 c824242359c8661623d61ee2fceb12ed 183 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 4 180 2.0E-76 T 25-04-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CLFO_RS00695 c824242359c8661623d61ee2fceb12ed 183 Gene3D G3DSA:2.60.120.10 2 182 1.3E-84 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS00695 c824242359c8661623d61ee2fceb12ed 183 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 6 180 2.0E-84 T 25-04-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CLFO_RS00695 c824242359c8661623d61ee2fceb12ed 183 SUPERFAMILY SSF51182 4 180 1.54E-77 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS17860 be63ee6ad49c7771ce2061512a27936a 240 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 60 227 1.6E-65 T 25-04-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CLFO_RS17860 be63ee6ad49c7771ce2061512a27936a 240 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 56 232 3.5E-56 T 25-04-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CLFO_RS18805 e4a864bdc1b4ff6e716894f4a0d22ecf 548 Gene3D G3DSA:3.40.50.150 306 439 2.3E-53 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS18805 e4a864bdc1b4ff6e716894f4a0d22ecf 548 Gene3D G3DSA:3.40.50.150 38 214 2.3E-53 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS18805 e4a864bdc1b4ff6e716894f4a0d22ecf 548 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 376 390 2.4E-12 T 25-04-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CLFO_RS18805 e4a864bdc1b4ff6e716894f4a0d22ecf 548 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 117 136 2.4E-12 T 25-04-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CLFO_RS18805 e4a864bdc1b4ff6e716894f4a0d22ecf 548 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 353 375 2.4E-12 T 25-04-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CLFO_RS18805 e4a864bdc1b4ff6e716894f4a0d22ecf 548 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 62 74 2.4E-12 T 25-04-2017 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CLFO_RS18805 e4a864bdc1b4ff6e716894f4a0d22ecf 548 SUPERFAMILY SSF53335 38 244 1.84E-53 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS18805 e4a864bdc1b4ff6e716894f4a0d22ecf 548 SUPERFAMILY SSF53335 325 415 1.84E-53 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS18805 e4a864bdc1b4ff6e716894f4a0d22ecf 548 Pfam PF01555 DNA methylase 63 411 3.9E-35 T 25-04-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CLFO_RS19535 b1cc4966962ca4a95ccbbd9be4ab93cc 248 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 35.249 T 25-04-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS19535 b1cc4966962ca4a95ccbbd9be4ab93cc 248 Pfam PF01416 tRNA pseudouridine synthase 9 103 5.8E-11 T 25-04-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS19535 b1cc4966962ca4a95ccbbd9be4ab93cc 248 Pfam PF01416 tRNA pseudouridine synthase 143 245 1.1E-26 T 25-04-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS19535 b1cc4966962ca4a95ccbbd9be4ab93cc 248 PIRSF PIRSF001430 1 248 1.4E-78 T 25-04-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS19535 b1cc4966962ca4a95ccbbd9be4ab93cc 248 Gene3D G3DSA:3.30.70.660 107 242 8.9E-45 T 25-04-2017 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS19535 b1cc4966962ca4a95ccbbd9be4ab93cc 248 SUPERFAMILY SSF55120 1 245 2.01E-81 T 25-04-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS19535 b1cc4966962ca4a95ccbbd9be4ab93cc 248 Gene3D G3DSA:3.30.70.580 1 104 1.5E-35 T 25-04-2017 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS19535 b1cc4966962ca4a95ccbbd9be4ab93cc 248 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 239 1.5E-60 T 25-04-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS16395 0e41683e7813188e69a3359c202193f1 658 Pfam PF13307 Helicase C-terminal domain 485 625 8.8E-22 T 25-04-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CLFO_RS16395 0e41683e7813188e69a3359c202193f1 658 SUPERFAMILY SSF52540 462 571 7.16E-13 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16395 0e41683e7813188e69a3359c202193f1 658 SUPERFAMILY SSF52540 416 430 7.16E-13 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16395 0e41683e7813188e69a3359c202193f1 658 SUPERFAMILY SSF52540 193 274 7.16E-13 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16395 0e41683e7813188e69a3359c202193f1 658 SUPERFAMILY SSF52540 57 108 7.16E-13 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16395 0e41683e7813188e69a3359c202193f1 658 SMART SM00491 495 630 1.3E-7 T 25-04-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CLFO_RS16395 0e41683e7813188e69a3359c202193f1 658 Gene3D G3DSA:3.40.50.300 489 616 2.0E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16395 0e41683e7813188e69a3359c202193f1 658 Gene3D G3DSA:3.40.50.300 209 281 2.4E-7 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16395 0e41683e7813188e69a3359c202193f1 658 Gene3D G3DSA:3.40.50.300 418 430 2.4E-7 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16395 0e41683e7813188e69a3359c202193f1 658 Gene3D G3DSA:3.40.50.300 51 142 2.4E-7 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.6E-19 T 25-04-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 280 299 1.6E-19 T 25-04-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 381 394 1.6E-19 T 25-04-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.6E-19 T 25-04-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.6E-19 T 25-04-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 424 38.438 T 25-04-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 Gene3D G3DSA:3.20.20.10 34 276 1.5E-81 T 25-04-2017 IPR029066 PLP-binding barrel CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 PRINTS PR01181 Diaminopimelate decarboxylase signature 391 413 2.1E-27 T 25-04-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 2.1E-27 T 25-04-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 2.1E-27 T 25-04-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 PRINTS PR01181 Diaminopimelate decarboxylase signature 309 327 2.1E-27 T 25-04-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 423 1.3E-141 T 25-04-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 SUPERFAMILY SSF50621 264 426 7.74E-50 T 25-04-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 Gene3D G3DSA:2.40.37.10 277 427 1.4E-46 T 25-04-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 290 2.2E-60 T 25-04-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 SUPERFAMILY SSF51419 25 292 3.34E-77 T 25-04-2017 IPR029066 PLP-binding barrel CLFO_RS19410 7360eedbe11637ab176a07b8e37cdaad 433 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 311 401 8.5E-13 T 25-04-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CLFO_RS13320 bba024c4c1fd582bb3fddda973c72a08 426 Pfam PF01610 Transposase 274 422 7.9E-14 T 25-04-2017 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CLFO_RS13320 bba024c4c1fd582bb3fddda973c72a08 426 Pfam PF01610 Transposase 4 160 1.6E-18 T 25-04-2017 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CLFO_RS11265 eb5e249b506b2349cde51a9e794b500c 76 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 75 4.0E-26 T 25-04-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS11265 eb5e249b506b2349cde51a9e794b500c 76 Hamap MF_01217 Acyl carrier protein [acpP]. 1 76 20.434 T 25-04-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS11265 eb5e249b506b2349cde51a9e794b500c 76 Pfam PF00550 Phosphopantetheine attachment site 4 72 7.9E-17 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS11265 eb5e249b506b2349cde51a9e794b500c 76 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 75 3.0E-12 T 25-04-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS11265 eb5e249b506b2349cde51a9e794b500c 76 SUPERFAMILY SSF47336 2 75 8.24E-23 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS11265 eb5e249b506b2349cde51a9e794b500c 76 Gene3D G3DSA:1.10.1200.10 2 75 3.5E-28 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS11470 57592979f2d049a1146d33b45950481e 222 SUPERFAMILY SSF57716 90 119 4.99E-5 T 25-04-2017 CLFO_RS11470 57592979f2d049a1146d33b45950481e 222 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 88 118 2.1E-6 T 25-04-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CLFO_RS11470 57592979f2d049a1146d33b45950481e 222 SUPERFAMILY SSF109635 4 89 7.59E-15 T 25-04-2017 CLFO_RS11470 57592979f2d049a1146d33b45950481e 222 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 4 167 1.0E-50 T 25-04-2017 IPR014240 Regulatory protein, YteA family CLFO_RS11565 220143f61fa3cb24828f490eeaf3a5f6 491 SUPERFAMILY SSF53335 5 489 8.0E-122 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11565 220143f61fa3cb24828f490eeaf3a5f6 491 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 273 279 - T 25-04-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLFO_RS11565 220143f61fa3cb24828f490eeaf3a5f6 491 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 300 324 3.3E-18 T 25-04-2017 CLFO_RS11565 220143f61fa3cb24828f490eeaf3a5f6 491 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 188 202 3.3E-18 T 25-04-2017 CLFO_RS11565 220143f61fa3cb24828f490eeaf3a5f6 491 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 164 180 3.3E-18 T 25-04-2017 CLFO_RS11565 220143f61fa3cb24828f490eeaf3a5f6 491 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 270 282 3.3E-18 T 25-04-2017 CLFO_RS11565 220143f61fa3cb24828f490eeaf3a5f6 491 Pfam PF02384 N-6 DNA Methylase 143 455 5.2E-66 T 25-04-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CLFO_RS11565 220143f61fa3cb24828f490eeaf3a5f6 491 Pfam PF12161 HsdM N-terminal domain 7 130 3.4E-14 T 25-04-2017 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CLFO_RS11565 220143f61fa3cb24828f490eeaf3a5f6 491 Gene3D G3DSA:3.40.50.150 167 403 1.5E-39 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS13775 ae9c7c07b77e0384bb4e4072be392f8f 207 Gene3D G3DSA:3.40.50.150 23 204 7.4E-26 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS13775 ae9c7c07b77e0384bb4e4072be392f8f 207 SUPERFAMILY SSF53335 11 195 4.14E-27 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS13775 ae9c7c07b77e0384bb4e4072be392f8f 207 Pfam PF08241 Methyltransferase domain 39 137 3.2E-14 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS03555 fc5add91cbbaac601323e9af59d33e2f 231 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 5 176 1.9E-32 T 25-04-2017 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 CLFO_RS03555 fc5add91cbbaac601323e9af59d33e2f 231 SUPERFAMILY SSF53323 4 221 2.22E-33 T 25-04-2017 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLFO_RS03555 fc5add91cbbaac601323e9af59d33e2f 231 Gene3D G3DSA:3.40.920.10 4 218 2.5E-51 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS03555 fc5add91cbbaac601323e9af59d33e2f 231 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 13 213 1.7E-36 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS00870 131f2f34d87ec79d90a6be9f8346f91a 207 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 120 205 4.2E-17 T 25-04-2017 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CLFO_RS00870 131f2f34d87ec79d90a6be9f8346f91a 207 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 5 207 37.723 T 25-04-2017 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 CLFO_RS00870 131f2f34d87ec79d90a6be9f8346f91a 207 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 116 202 21.913 T 25-04-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CLFO_RS00870 131f2f34d87ec79d90a6be9f8346f91a 207 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 119 202 2.9E-33 T 25-04-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CLFO_RS00870 131f2f34d87ec79d90a6be9f8346f91a 207 SUPERFAMILY SSF141734 5 108 7.32E-49 T 25-04-2017 CLFO_RS00870 131f2f34d87ec79d90a6be9f8346f91a 207 SUPERFAMILY SSF101386 118 205 2.18E-25 T 25-04-2017 CLFO_RS00870 131f2f34d87ec79d90a6be9f8346f91a 207 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 102 2.0E-18 T 25-04-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CLFO_RS00870 131f2f34d87ec79d90a6be9f8346f91a 207 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 3 106 32.033 T 25-04-2017 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CLFO_RS00870 131f2f34d87ec79d90a6be9f8346f91a 207 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 29 102 1.7E-35 T 25-04-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CLFO_RS14910 b7392298e619e39c0a7727efeb9213ea 328 SUPERFAMILY SSF51735 1 326 3.48E-96 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14910 b7392298e619e39c0a7727efeb9213ea 328 Gene3D G3DSA:3.90.25.10 170 221 4.3E-49 T 25-04-2017 CLFO_RS14910 b7392298e619e39c0a7727efeb9213ea 328 Gene3D G3DSA:3.90.25.10 253 327 4.3E-49 T 25-04-2017 CLFO_RS14910 b7392298e619e39c0a7727efeb9213ea 328 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 325 1.4E-137 T 25-04-2017 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CLFO_RS14910 b7392298e619e39c0a7727efeb9213ea 328 Gene3D G3DSA:3.40.50.720 1 169 3.6E-52 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14910 b7392298e619e39c0a7727efeb9213ea 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 251 2.5E-59 T 25-04-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CLFO_RS11045 99fcb9f539aa420dbca88adf1e6ec005 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 9.2E-31 T 25-04-2017 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CLFO_RS11045 99fcb9f539aa420dbca88adf1e6ec005 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 7.6E-22 T 25-04-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLFO_RS11045 99fcb9f539aa420dbca88adf1e6ec005 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 7.6E-22 T 25-04-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLFO_RS11045 99fcb9f539aa420dbca88adf1e6ec005 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 7.6E-22 T 25-04-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLFO_RS11045 99fcb9f539aa420dbca88adf1e6ec005 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.7E-28 T 25-04-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLFO_RS11045 99fcb9f539aa420dbca88adf1e6ec005 89 PIRSF PIRSF004669 1 89 4.3E-31 T 25-04-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CLFO_RS17110 d84de8e14df791313075fd5cc7310316 238 Pfam PF01863 Protein of unknown function DUF45 21 228 2.9E-59 T 25-04-2017 IPR002725 Protein of unknown function DUF45 CLFO_RS18065 045314f506e06ecd3adeb47df3146a38 359 SMART SM01329 5 350 8.5E-167 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS18065 045314f506e06ecd3adeb47df3146a38 359 Gene3D G3DSA:3.40.718.10 1 355 1.4E-116 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS18065 045314f506e06ecd3adeb47df3146a38 359 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 25-04-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CLFO_RS18065 045314f506e06ecd3adeb47df3146a38 359 SUPERFAMILY SSF53659 2 354 4.61E-115 T 25-04-2017 CLFO_RS18065 045314f506e06ecd3adeb47df3146a38 359 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 354 8.8E-153 T 25-04-2017 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 CLFO_RS18065 045314f506e06ecd3adeb47df3146a38 359 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 350 6.5E-91 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS03930 38278ce9ff1994e0895de99f43df9492 284 SUPERFAMILY SSF53633 3 284 2.62E-96 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS03930 38278ce9ff1994e0895de99f43df9492 284 TIGRFAM TIGR00761 argB: acetylglutamate kinase 26 259 6.6E-83 T 25-04-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLFO_RS03930 38278ce9ff1994e0895de99f43df9492 284 Hamap MF_00082_A Acetylglutamate kinase [argB]. 26 269 29.832 T 25-04-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLFO_RS03930 38278ce9ff1994e0895de99f43df9492 284 Gene3D G3DSA:3.40.1160.10 24 283 1.1E-107 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS03930 38278ce9ff1994e0895de99f43df9492 284 Pfam PF00696 Amino acid kinase family 26 261 1.9E-49 T 25-04-2017 IPR001048 Aspartate/glutamate/uridylate kinase CLFO_RS03930 38278ce9ff1994e0895de99f43df9492 284 Hamap MF_00082_B Acetylglutamate kinase [argB]. 23 284 36.972 T 25-04-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLFO_RS03930 38278ce9ff1994e0895de99f43df9492 284 PIRSF PIRSF000728 10 284 2.0E-116 T 25-04-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CLFO_RS03930 38278ce9ff1994e0895de99f43df9492 284 PRINTS PR00474 Glutamate 5-kinase family signature 181 208 1.4E-5 T 25-04-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CLFO_RS03930 38278ce9ff1994e0895de99f43df9492 284 PRINTS PR00474 Glutamate 5-kinase family signature 234 254 1.4E-5 T 25-04-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 CLFO_RS21040 86fe7711dd1a1cbcbbb36758061e8fdf 587 Gene3D G3DSA:3.40.50.300 340 579 1.3E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21040 86fe7711dd1a1cbcbbb36758061e8fdf 587 Pfam PF00005 ABC transporter 356 498 2.7E-25 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS21040 86fe7711dd1a1cbcbbb36758061e8fdf 587 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS21040 86fe7711dd1a1cbcbbb36758061e8fdf 587 Gene3D G3DSA:1.20.1560.10 13 318 2.5E-4 T 25-04-2017 CLFO_RS21040 86fe7711dd1a1cbcbbb36758061e8fdf 587 SUPERFAMILY SSF52540 336 569 9.85E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21040 86fe7711dd1a1cbcbbb36758061e8fdf 587 SMART SM00382 365 545 2.6E-16 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS21040 86fe7711dd1a1cbcbbb36758061e8fdf 587 SUPERFAMILY SSF90123 12 304 3.01E-13 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS02090 0fe9e2d200eb92beeda5f8d88190f8c2 333 Gene3D G3DSA:3.40.50.1220 198 324 5.5E-54 T 25-04-2017 IPR029035 DHS-like NAD/FAD-binding domain CLFO_RS02090 0fe9e2d200eb92beeda5f8d88190f8c2 333 SUPERFAMILY SSF52402 8 183 5.44E-45 T 25-04-2017 CLFO_RS02090 0fe9e2d200eb92beeda5f8d88190f8c2 333 Gene3D G3DSA:3.40.50.620 8 185 8.8E-58 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS02090 0fe9e2d200eb92beeda5f8d88190f8c2 333 SMART SM00893 9 202 3.0E-43 T 25-04-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLFO_RS02090 0fe9e2d200eb92beeda5f8d88190f8c2 333 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 204 286 3.8E-34 T 25-04-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CLFO_RS02090 0fe9e2d200eb92beeda5f8d88190f8c2 333 PIRSF PIRSF000089 5 328 1.1E-106 T 25-04-2017 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CLFO_RS02090 0fe9e2d200eb92beeda5f8d88190f8c2 333 Pfam PF01012 Electron transfer flavoprotein domain 10 184 1.4E-41 T 25-04-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLFO_RS02090 0fe9e2d200eb92beeda5f8d88190f8c2 333 SUPERFAMILY SSF52467 203 323 2.62E-46 T 25-04-2017 IPR029035 DHS-like NAD/FAD-binding domain CLFO_RS11900 a36952efa487258548ae6288f9500e3d 229 Pfam PF05067 Manganese containing catalase 1 199 2.5E-56 T 25-04-2017 IPR007760 Manganese catalase CLFO_RS11900 a36952efa487258548ae6288f9500e3d 229 SUPERFAMILY SSF47240 1 217 5.35E-75 T 25-04-2017 IPR009078 Ferritin-like superfamily CLFO_RS11900 a36952efa487258548ae6288f9500e3d 229 Gene3D G3DSA:1.20.1260.10 1 182 7.1E-71 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS06930 2a154d9ed59e04c98cae4f39e6317680 273 SUPERFAMILY SSF52402 5 192 3.31E-36 T 25-04-2017 CLFO_RS06930 2a154d9ed59e04c98cae4f39e6317680 273 Pfam PF02540 NAD synthase 16 77 1.9E-5 T 25-04-2017 IPR022310 NAD/GMP synthase CLFO_RS06930 2a154d9ed59e04c98cae4f39e6317680 273 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 6 261 1.8E-82 T 25-04-2017 IPR005232 Conserved hypothetical protein CHP00268 CLFO_RS06930 2a154d9ed59e04c98cae4f39e6317680 273 PIRSF PIRSF006661 1 273 1.2E-102 T 25-04-2017 IPR005232 Conserved hypothetical protein CHP00268 CLFO_RS06930 2a154d9ed59e04c98cae4f39e6317680 273 Gene3D G3DSA:3.40.50.620 16 171 4.2E-30 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS01240 31af54fdd7fa57a6ff5196de0b491fe4 265 SUPERFAMILY SSF51658 23 256 1.57E-40 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS01240 31af54fdd7fa57a6ff5196de0b491fe4 265 Gene3D G3DSA:3.20.20.150 45 241 3.1E-31 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS01240 31af54fdd7fa57a6ff5196de0b491fe4 265 SMART SM00518 2 257 3.8E-4 T 25-04-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CLFO_RS01240 31af54fdd7fa57a6ff5196de0b491fe4 265 Pfam PF01261 Xylose isomerase-like TIM barrel 38 217 9.2E-20 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS16355 35032320a755caaedfd5cae288ea7be7 120 Pfam PF10710 Protein of unknown function (DUF2512) 5 112 2.4E-22 T 25-04-2017 IPR019649 Protein of unknown function DUF2512 CLFO_RS01355 e038d861461a7c49c17207fb51bdf9ad 507 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 454 500 4.2E-11 T 25-04-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLFO_RS01355 e038d861461a7c49c17207fb51bdf9ad 507 Pfam PF00460 Flagella basal body rod protein 8 38 8.1E-11 T 25-04-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLFO_RS01355 e038d861461a7c49c17207fb51bdf9ad 507 SUPERFAMILY SSF64518 146 500 7.06E-20 T 25-04-2017 CLFO_RS01355 e038d861461a7c49c17207fb51bdf9ad 507 PRINTS PR01005 Flagellar hook-associated protein signature 162 186 1.2E-8 T 25-04-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CLFO_RS01355 e038d861461a7c49c17207fb51bdf9ad 507 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 1.2E-8 T 25-04-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CLFO_RS01355 e038d861461a7c49c17207fb51bdf9ad 507 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 499 1.8E-113 T 25-04-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CLFO_RS12895 59b518fa6bb2ccd5ea441d82dee05bf5 315 Pfam PF00005 ABC transporter 24 178 1.5E-29 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS12895 59b518fa6bb2ccd5ea441d82dee05bf5 315 SUPERFAMILY SSF52540 1 249 2.6E-68 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12895 59b518fa6bb2ccd5ea441d82dee05bf5 315 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 295 4.2E-8 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS12895 59b518fa6bb2ccd5ea441d82dee05bf5 315 Gene3D G3DSA:3.40.50.300 2 251 9.7E-79 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12895 59b518fa6bb2ccd5ea441d82dee05bf5 315 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS12895 59b518fa6bb2ccd5ea441d82dee05bf5 315 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 228 314 7.9E-13 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS12895 59b518fa6bb2ccd5ea441d82dee05bf5 315 SMART SM00382 33 227 3.8E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS11980 fcbcb4c48420fe89552849f11b93eec4 92 SUPERFAMILY SSF143430 1 85 8.24E-21 T 25-04-2017 CLFO_RS11980 fcbcb4c48420fe89552849f11b93eec4 92 Gene3D G3DSA:3.30.70.240 1 69 8.0E-22 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS11980 fcbcb4c48420fe89552849f11b93eec4 92 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 85 2.1E-12 T 25-04-2017 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 CLFO_RS11980 fcbcb4c48420fe89552849f11b93eec4 92 Pfam PF09827 CRISPR associated protein Cas2 1 75 1.6E-19 T 25-04-2017 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 CLFO_RS11980 fcbcb4c48420fe89552849f11b93eec4 92 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 92 13.76 T 25-04-2017 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 CLFO_RS13035 13c8a6eedda3ad71f98332b094b1aed3 860 Gene3D G3DSA:3.40.50.300 427 512 6.4E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13035 13c8a6eedda3ad71f98332b094b1aed3 860 Pfam PF02026 RyR domain 780 831 9.5E-9 T 25-04-2017 IPR003032 Ryanodine receptor Ryr Reactome: R-HSA-2672351|Reactome: R-HSA-5578775 CLFO_RS13035 13c8a6eedda3ad71f98332b094b1aed3 860 SUPERFAMILY SSF52540 437 644 7.5E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20635 e1a69274d5fe03c34d27d52a8701fece 392 SUPERFAMILY SSF55031 181 301 4.19E-23 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS20635 e1a69274d5fe03c34d27d52a8701fece 392 Pfam PF07687 Peptidase dimerisation domain 186 268 1.5E-10 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS20635 e1a69274d5fe03c34d27d52a8701fece 392 PIRSF PIRSF005962 1 392 3.7E-129 T 25-04-2017 IPR017439 Amidohydrolase GO:0016787 CLFO_RS20635 e1a69274d5fe03c34d27d52a8701fece 392 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 377 1.6E-110 T 25-04-2017 IPR017439 Amidohydrolase GO:0016787 CLFO_RS20635 e1a69274d5fe03c34d27d52a8701fece 392 SUPERFAMILY SSF53187 301 390 5.74E-81 T 25-04-2017 CLFO_RS20635 e1a69274d5fe03c34d27d52a8701fece 392 SUPERFAMILY SSF53187 4 197 5.74E-81 T 25-04-2017 CLFO_RS20635 e1a69274d5fe03c34d27d52a8701fece 392 Gene3D G3DSA:3.30.70.360 181 300 2.7E-31 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS20635 e1a69274d5fe03c34d27d52a8701fece 392 Pfam PF01546 Peptidase family M20/M25/M40 72 385 9.7E-38 T 25-04-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLFO_RS20635 e1a69274d5fe03c34d27d52a8701fece 392 Gene3D G3DSA:3.40.630.10 4 178 1.3E-97 T 25-04-2017 CLFO_RS20635 e1a69274d5fe03c34d27d52a8701fece 392 Gene3D G3DSA:3.40.630.10 301 391 1.3E-97 T 25-04-2017 CLFO_RS13530 dadbffa7fe1e6eb268a54c08c836ea96 250 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 228 2.7E-44 T 25-04-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CLFO_RS18925 dedd88e6f486204d273caa822d9d1321 473 Gene3D G3DSA:3.90.1150.10 335 451 1.1E-32 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS18925 dedd88e6f486204d273caa822d9d1321 473 Gene3D G3DSA:3.90.1150.10 38 85 1.1E-32 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS18925 dedd88e6f486204d273caa822d9d1321 473 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 245 282 - T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS18925 dedd88e6f486204d273caa822d9d1321 473 SUPERFAMILY SSF53383 49 450 2.58E-121 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS18925 dedd88e6f486204d273caa822d9d1321 473 Gene3D G3DSA:3.40.640.10 92 332 5.7E-82 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS18925 dedd88e6f486204d273caa822d9d1321 473 Pfam PF00202 Aminotransferase class-III 53 449 1.5E-103 T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS04815 e7c99299818b22ca3524522912519362 387 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 203 386 3.7E-46 T 25-04-2017 CLFO_RS04815 e7c99299818b22ca3524522912519362 387 SUPERFAMILY SSF51735 199 383 9.43E-41 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04815 e7c99299818b22ca3524522912519362 387 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 221 1.5E-5 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS04815 e7c99299818b22ca3524522912519362 387 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 282 293 1.5E-5 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS04815 e7c99299818b22ca3524522912519362 387 Pfam PF08659 KR domain 203 387 2.7E-59 T 25-04-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04815 e7c99299818b22ca3524522912519362 387 Gene3D G3DSA:3.40.50.720 201 386 9.1E-55 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS02355 af5b3a6352730ccbfa40f1fe10a4a7aa 326 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 10 309 1.5E-38 T 25-04-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CLFO_RS02355 af5b3a6352730ccbfa40f1fe10a4a7aa 326 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 9 307 5.7E-48 T 25-04-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CLFO_RS01930 86176bd017e0851021ba793b8e521fbe 94 SMART SM00883 2 93 1.1E-52 T 25-04-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLFO_RS01930 86176bd017e0851021ba793b8e521fbe 94 Hamap MF_00580 10 kDa chaperonin [groS]. 2 94 25.6 T 25-04-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLFO_RS01930 86176bd017e0851021ba793b8e521fbe 94 PRINTS PR00297 10kDa chaperonin signature 25 46 3.1E-31 T 25-04-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLFO_RS01930 86176bd017e0851021ba793b8e521fbe 94 PRINTS PR00297 10kDa chaperonin signature 80 93 3.1E-31 T 25-04-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLFO_RS01930 86176bd017e0851021ba793b8e521fbe 94 PRINTS PR00297 10kDa chaperonin signature 59 71 3.1E-31 T 25-04-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLFO_RS01930 86176bd017e0851021ba793b8e521fbe 94 PRINTS PR00297 10kDa chaperonin signature 3 18 3.1E-31 T 25-04-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLFO_RS01930 86176bd017e0851021ba793b8e521fbe 94 Gene3D G3DSA:2.30.33.40 1 94 1.5E-37 T 25-04-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLFO_RS01930 86176bd017e0851021ba793b8e521fbe 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 25-04-2017 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CLFO_RS01930 86176bd017e0851021ba793b8e521fbe 94 SUPERFAMILY SSF50129 1 94 2.92E-33 T 25-04-2017 IPR011032 GroES-like CLFO_RS01930 86176bd017e0851021ba793b8e521fbe 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 4.2E-34 T 25-04-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CLFO_RS08385 2175d2ad8e551b4fd6740e729b1039a8 118 Pfam PF07085 DRTGG domain 9 96 2.9E-8 T 25-04-2017 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLFO_RS08385 2175d2ad8e551b4fd6740e729b1039a8 118 SUPERFAMILY SSF75138 1 107 2.09E-20 T 25-04-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CLFO_RS08385 2175d2ad8e551b4fd6740e729b1039a8 118 Gene3D G3DSA:3.40.1390.20 1 98 3.0E-16 T 25-04-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CLFO_RS10315 54eff5123c831f5f83d3ebfc641a9f2b 108 Pfam PF09682 Bacteriophage holin of superfamily 6 (Holin_LLH) 8 97 1.5E-12 T 25-04-2017 IPR010026 Phage holin, LL-H family CLFO_RS15875 844663bdb5b471b2c095fc3372ae8da6 315 Gene3D G3DSA:1.10.3720.10 91 298 5.1E-25 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15875 844663bdb5b471b2c095fc3372ae8da6 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 1.5E-46 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15875 844663bdb5b471b2c095fc3372ae8da6 315 SUPERFAMILY SSF161098 93 295 6.02E-23 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS07970 21de31ef41e47281a9b27963fd96e532 341 PIRSF PIRSF011570 3 339 3.3E-157 T 25-04-2017 IPR010894 Stage V sporulation AD CLFO_RS07970 21de31ef41e47281a9b27963fd96e532 341 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 8 336 1.3E-148 T 25-04-2017 IPR010894 Stage V sporulation AD CLFO_RS07970 21de31ef41e47281a9b27963fd96e532 341 SUPERFAMILY SSF53901 58 263 2.03E-17 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS07970 21de31ef41e47281a9b27963fd96e532 341 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 7 336 1.0E-160 T 25-04-2017 IPR010894 Stage V sporulation AD CLFO_RS07970 21de31ef41e47281a9b27963fd96e532 341 Gene3D G3DSA:3.40.47.10 57 177 8.3E-9 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS11480 b7aeee04238568f2451ac528f647a0d2 232 Gene3D G3DSA:3.40.50.1580 1 231 1.0E-69 T 25-04-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLFO_RS11480 b7aeee04238568f2451ac528f647a0d2 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 230 5.4E-59 T 25-04-2017 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CLFO_RS11480 b7aeee04238568f2451ac528f647a0d2 232 SUPERFAMILY SSF53167 3 230 2.49E-62 T 25-04-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLFO_RS11480 b7aeee04238568f2451ac528f647a0d2 232 Pfam PF01048 Phosphorylase superfamily 3 229 3.6E-47 T 25-04-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CLFO_RS04145 2f0fa4417d3357d73452a0f04f644639 268 SUPERFAMILY SSF161098 77 258 9.55E-31 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04145 2f0fa4417d3357d73452a0f04f644639 268 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 21 267 1.3E-80 T 25-04-2017 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 CLFO_RS04145 2f0fa4417d3357d73452a0f04f644639 268 Gene3D G3DSA:1.10.3720.10 74 267 1.7E-26 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04145 2f0fa4417d3357d73452a0f04f644639 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 266 4.5E-15 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS14790 b9312b2978ad615b8ba82e15d80ddffd 461 Gene3D G3DSA:3.40.50.1100 3 43 8.5E-10 T 25-04-2017 CLFO_RS14790 b9312b2978ad615b8ba82e15d80ddffd 461 Gene3D G3DSA:3.40.50.1100 145 314 8.5E-10 T 25-04-2017 CLFO_RS14790 b9312b2978ad615b8ba82e15d80ddffd 461 Gene3D G3DSA:3.40.630.30 320 448 3.8E-20 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS14790 b9312b2978ad615b8ba82e15d80ddffd 461 Pfam PF00583 Acetyltransferase (GNAT) family 371 447 8.7E-12 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS14790 b9312b2978ad615b8ba82e15d80ddffd 461 SUPERFAMILY SSF53686 8 321 1.65E-36 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS14790 b9312b2978ad615b8ba82e15d80ddffd 461 SUPERFAMILY SSF55729 300 449 1.19E-20 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS14790 b9312b2978ad615b8ba82e15d80ddffd 461 Gene3D G3DSA:3.40.50.1100 44 134 3.2E-7 T 25-04-2017 CLFO_RS14790 b9312b2978ad615b8ba82e15d80ddffd 461 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 311 4.1E-29 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS17830 c6b4087f3d5fc6fa6bf11fe7133d3207 341 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 40 319 5.5E-57 T 25-04-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CLFO_RS17830 c6b4087f3d5fc6fa6bf11fe7133d3207 341 Gene3D G3DSA:3.40.190.100 124 271 2.6E-37 T 25-04-2017 CLFO_RS17830 c6b4087f3d5fc6fa6bf11fe7133d3207 341 Gene3D G3DSA:3.40.190.10 272 330 9.7E-21 T 25-04-2017 CLFO_RS17830 c6b4087f3d5fc6fa6bf11fe7133d3207 341 Gene3D G3DSA:3.40.190.10 36 122 9.7E-21 T 25-04-2017 CLFO_RS17830 c6b4087f3d5fc6fa6bf11fe7133d3207 341 SUPERFAMILY SSF53850 35 335 6.63E-65 T 25-04-2017 CLFO_RS05000 a20f6452d67d20629d1a5c8afd46d6df 204 SUPERFAMILY SSF50486 2 203 3.14E-69 T 25-04-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CLFO_RS05000 a20f6452d67d20629d1a5c8afd46d6df 204 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 6 202 33.885 T 25-04-2017 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CLFO_RS05000 a20f6452d67d20629d1a5c8afd46d6df 204 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 8 198 7.3E-66 T 25-04-2017 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CLFO_RS05000 a20f6452d67d20629d1a5c8afd46d6df 204 Gene3D G3DSA:3.10.300.10 2 203 4.5E-79 T 25-04-2017 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CLFO_RS05000 a20f6452d67d20629d1a5c8afd46d6df 204 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 5 202 1.1E-64 T 25-04-2017 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CLFO_RS14840 1883281f9efa28bf6086ea6a320fad30 390 Pfam PF14907 Uncharacterised nucleotidyltransferase 28 268 2.6E-59 T 25-04-2017 CLFO_RS05580 39efe7457933e1827582ceac0b8308a3 975 Pfam PF05193 Peptidase M16 inactive domain 206 390 9.8E-19 T 25-04-2017 IPR007863 Peptidase M16, C-terminal CLFO_RS05580 39efe7457933e1827582ceac0b8308a3 975 Pfam PF08367 Peptidase M16C associated 465 714 3.2E-78 T 25-04-2017 IPR013578 Peptidase M16C associated GO:0006508 CLFO_RS05580 39efe7457933e1827582ceac0b8308a3 975 SUPERFAMILY SSF63411 7 245 4.78E-49 T 25-04-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLFO_RS05580 39efe7457933e1827582ceac0b8308a3 975 SMART SM01264 464 714 1.1E-101 T 25-04-2017 IPR013578 Peptidase M16C associated GO:0006508 CLFO_RS05580 39efe7457933e1827582ceac0b8308a3 975 SUPERFAMILY SSF63411 523 773 4.17E-69 T 25-04-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLFO_RS05580 39efe7457933e1827582ceac0b8308a3 975 Gene3D G3DSA:3.30.830.10 30 248 5.1E-43 T 25-04-2017 IPR011237 Peptidase M16 domain GO:0046872 CLFO_RS05580 39efe7457933e1827582ceac0b8308a3 975 Gene3D G3DSA:3.30.830.10 534 684 7.7E-7 T 25-04-2017 IPR011237 Peptidase M16 domain GO:0046872 CLFO_RS05580 39efe7457933e1827582ceac0b8308a3 975 SUPERFAMILY SSF63411 777 974 3.21E-34 T 25-04-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLFO_RS05580 39efe7457933e1827582ceac0b8308a3 975 SUPERFAMILY SSF63411 262 522 1.07E-61 T 25-04-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CLFO_RS18430 ea86857838c6b8127033f8321b27f5ff 291 Gene3D G3DSA:3.20.20.60 2 235 3.4E-74 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS18430 ea86857838c6b8127033f8321b27f5ff 291 SUPERFAMILY SSF51621 2 234 7.85E-63 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS18430 ea86857838c6b8127033f8321b27f5ff 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 224 3.3E-61 T 25-04-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CLFO_RS18430 ea86857838c6b8127033f8321b27f5ff 291 PIRSF PIRSF015582 1 291 1.3E-82 T 25-04-2017 IPR011206 Citrate lyase beta subunit-like CLFO_RS10980 a01456f4e4855ba51ec428bb16edbb2c 619 Gene3D G3DSA:3.30.30.80 6 41 1.7E-6 T 25-04-2017 IPR032782 Jag, N-terminal CLFO_RS10980 a01456f4e4855ba51ec428bb16edbb2c 619 Pfam PF14804 Jag N-terminus 9 51 5.7E-7 T 25-04-2017 IPR032782 Jag, N-terminal CLFO_RS10980 a01456f4e4855ba51ec428bb16edbb2c 619 Pfam PF03961 Protein of unknown function (DUF342) 166 612 2.6E-128 T 25-04-2017 IPR005646 Protein of unknown function DUF342 CLFO_RS10980 a01456f4e4855ba51ec428bb16edbb2c 619 Gene3D G3DSA:2.160.20.70 363 399 8.9E-5 T 25-04-2017 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 CLFO_RS10980 a01456f4e4855ba51ec428bb16edbb2c 619 SMART SM01245 8 57 5.8E-6 T 25-04-2017 IPR032782 Jag, N-terminal CLFO_RS10980 a01456f4e4855ba51ec428bb16edbb2c 619 SUPERFAMILY SSF63848 358 392 4.18E-5 T 25-04-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 SUPERFAMILY SSF55060 161 263 8.15E-24 T 25-04-2017 IPR013750 GHMP kinase, C-terminal domain CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 SUPERFAMILY SSF54211 1 151 1.06E-35 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 Hamap MF_00384 Homoserine kinase [thrB]. 2 282 31.33 T 25-04-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 Gene3D G3DSA:3.30.230.10 1 150 1.3E-59 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 TIGRFAM TIGR00191 thrB: homoserine kinase 2 294 2.2E-86 T 25-04-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 Gene3D G3DSA:3.30.70.890 157 273 8.3E-33 T 25-04-2017 IPR013750 GHMP kinase, C-terminal domain CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 85 96 - T 25-04-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 Pfam PF00288 GHMP kinases N terminal domain 79 139 7.0E-14 T 25-04-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 PIRSF PIRSF000676 1 295 8.2E-93 T 25-04-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 PRINTS PR00958 Homoserine kinase signature 165 182 1.3E-36 T 25-04-2017 CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 PRINTS PR00958 Homoserine kinase signature 9 24 1.3E-36 T 25-04-2017 CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 PRINTS PR00958 Homoserine kinase signature 92 107 1.3E-36 T 25-04-2017 CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 PRINTS PR00958 Homoserine kinase signature 244 259 1.3E-36 T 25-04-2017 CLFO_RS20295 ba921d29186485ebe2c0d9dcdd0dbeb0 295 PRINTS PR00958 Homoserine kinase signature 126 139 1.3E-36 T 25-04-2017 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 SMART SM00387 617 731 5.5E-25 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 Gene3D G3DSA:3.30.565.10 579 729 4.8E-41 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 SMART SM00388 468 576 0.0035 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 Pfam PF00512 His Kinase A (phospho-acceptor) domain 470 575 6.6E-11 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 SUPERFAMILY SSF55785 304 430 1.24E-17 T 25-04-2017 IPR000014 PAS domain CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 Gene3D G3DSA:1.10.287.130 463 494 2.4E-5 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 Gene3D G3DSA:1.10.287.130 543 572 2.4E-5 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 620 728 6.0E-20 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 Pfam PF01590 GAF domain 161 298 3.7E-4 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 Gene3D G3DSA:3.30.450.20 18 55 9.3E-5 T 25-04-2017 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 SMART SM00091 319 385 8.2E-7 T 25-04-2017 IPR000014 PAS domain CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 SMART SM00091 20 89 1.8 T 25-04-2017 IPR000014 PAS domain CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 SUPERFAMILY SSF55781 161 318 4.17E-12 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 315 439 3.6E-22 T 25-04-2017 IPR000014 PAS domain CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 SUPERFAMILY SSF47384 544 574 7.85E-7 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 SUPERFAMILY SSF47384 462 503 7.85E-7 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 Pfam PF00989 PAS fold 319 415 6.5E-9 T 25-04-2017 IPR013767 PAS fold GO:0006355 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 715 728 1.6E-14 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 673 1.6E-14 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 687 1.6E-14 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 708 1.6E-14 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 SUPERFAMILY SSF55874 577 730 2.62E-39 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 Gene3D G3DSA:3.30.450.40 147 313 1.0E-9 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS09475 fd29aaac374b0d667f735249fb6ec8fb 734 Gene3D G3DSA:3.30.450.20 314 430 2.5E-16 T 25-04-2017 CLFO_RS12645 f14442556cc38c85c053e41c44507127 288 SUPERFAMILY SSF56281 31 280 9.43E-53 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS12645 f14442556cc38c85c053e41c44507127 288 SMART SM00849 42 239 8.6E-5 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS12645 f14442556cc38c85c053e41c44507127 288 Pfam PF00753 Metallo-beta-lactamase superfamily 40 238 6.4E-17 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS12645 f14442556cc38c85c053e41c44507127 288 Gene3D G3DSA:3.60.15.10 29 276 2.8E-37 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS01400 e330d68d7486c5c0ea0d38f707d2fc20 214 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 3 212 7.2E-57 T 25-04-2017 IPR020019 Sialic acid O-acyltransferase NeuD-like CLFO_RS01400 e330d68d7486c5c0ea0d38f707d2fc20 214 Gene3D G3DSA:3.40.50.20 2 96 9.9E-8 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS01400 e330d68d7486c5c0ea0d38f707d2fc20 214 SUPERFAMILY SSF51161 2 214 9.01E-43 T 25-04-2017 IPR011004 Trimeric LpxA-like CLFO_RS01400 e330d68d7486c5c0ea0d38f707d2fc20 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 163 197 3.1E-4 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS01400 e330d68d7486c5c0ea0d38f707d2fc20 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 98 125 8.5E-7 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS01400 e330d68d7486c5c0ea0d38f707d2fc20 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 158 2.0E-4 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS01400 e330d68d7486c5c0ea0d38f707d2fc20 214 Gene3D G3DSA:2.160.10.10 99 214 3.5E-33 T 25-04-2017 CLFO_RS20665 53bd0982ce98e3bc55d2816e2486979a 233 Gene3D G3DSA:1.10.101.10 30 99 1.5E-23 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS20665 53bd0982ce98e3bc55d2816e2486979a 233 SUPERFAMILY SSF47090 30 98 1.07E-20 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS20665 53bd0982ce98e3bc55d2816e2486979a 233 Pfam PF07486 Cell Wall Hydrolase 130 232 1.3E-27 T 25-04-2017 IPR011105 Cell wall hydrolase, SleB GO:0016787 CLFO_RS20665 53bd0982ce98e3bc55d2816e2486979a 233 Pfam PF01471 Putative peptidoglycan binding domain 39 95 7.1E-17 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS16865 b0d9038848d77905e9238cd7c6c80276 266 SUPERFAMILY SSF52540 4 231 9.73E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16865 b0d9038848d77905e9238cd7c6c80276 266 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS16865 b0d9038848d77905e9238cd7c6c80276 266 Pfam PF00005 ABC transporter 20 167 1.4E-33 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS16865 b0d9038848d77905e9238cd7c6c80276 266 SMART SM00382 28 217 6.5E-15 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS16865 b0d9038848d77905e9238cd7c6c80276 266 Gene3D G3DSA:3.40.50.300 3 236 6.8E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07905 65d6c4c19aa2578b416ea740fa1659af 203 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 7 188 3.7E-42 T 25-04-2017 IPR003741 LUD domain CLFO_RS07905 65d6c4c19aa2578b416ea740fa1659af 203 SUPERFAMILY SSF100950 3 151 6.7E-5 T 25-04-2017 CLFO_RS07905 65d6c4c19aa2578b416ea740fa1659af 203 Gene3D G3DSA:3.40.50.10420 2 151 2.6E-7 T 25-04-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CLFO_RS03710 e85bb7b1c48685e9a2004dfa8a33f556 215 Pfam PF01081 KDPG and KHG aldolase 9 201 2.3E-42 T 25-04-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CLFO_RS03710 e85bb7b1c48685e9a2004dfa8a33f556 215 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 2.0E-57 T 25-04-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CLFO_RS03710 e85bb7b1c48685e9a2004dfa8a33f556 215 SUPERFAMILY SSF51569 4 210 2.56E-65 T 25-04-2017 CLFO_RS03710 e85bb7b1c48685e9a2004dfa8a33f556 215 Gene3D G3DSA:3.20.20.70 6 213 4.9E-77 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS13630 deac4b7d6751ceb76de2dd4e0b4cf77a 158 SUPERFAMILY SSF52016 3 154 1.51E-41 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS13630 deac4b7d6751ceb76de2dd4e0b4cf77a 158 Pfam PF00694 Aconitase C-terminal domain 45 94 6.0E-17 T 25-04-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS13630 deac4b7d6751ceb76de2dd4e0b4cf77a 158 Gene3D G3DSA:3.20.19.10 2 137 4.7E-30 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS13630 deac4b7d6751ceb76de2dd4e0b4cf77a 158 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 6 151 2.8E-51 T 25-04-2017 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33 CLFO_RS14390 3403aa9979643420ec24e1e3b123c805 68 Gene3D G3DSA:1.20.1260.10 3 65 3.4E-4 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS00765 d3be69babed92d0543c90e7beb094376 75 Pfam PF00395 S-layer homology domain 32 75 1.5E-5 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS11255 da1f2cfa40c597b72623c78b9646cfe0 235 Hamap MF_00104 Ribonuclease 3 [rnc]. 15 232 32.031 T 25-04-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CLFO_RS11255 da1f2cfa40c597b72623c78b9646cfe0 235 Gene3D G3DSA:1.10.1520.10 12 157 2.2E-49 T 25-04-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CLFO_RS11255 da1f2cfa40c597b72623c78b9646cfe0 235 SUPERFAMILY SSF69065 4 170 4.19E-51 T 25-04-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CLFO_RS11255 da1f2cfa40c597b72623c78b9646cfe0 235 SUPERFAMILY SSF54768 122 234 5.97E-23 T 25-04-2017 CLFO_RS11255 da1f2cfa40c597b72623c78b9646cfe0 235 SMART SM00535 27 162 3.0E-53 T 25-04-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CLFO_RS11255 da1f2cfa40c597b72623c78b9646cfe0 235 Pfam PF00035 Double-stranded RNA binding motif 169 233 3.0E-16 T 25-04-2017 IPR014720 Double-stranded RNA-binding domain CLFO_RS11255 da1f2cfa40c597b72623c78b9646cfe0 235 Pfam PF14622 Ribonuclease-III-like 27 156 1.3E-42 T 25-04-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CLFO_RS11255 da1f2cfa40c597b72623c78b9646cfe0 235 SMART SM00358 169 235 2.9E-16 T 25-04-2017 IPR014720 Double-stranded RNA-binding domain CLFO_RS11255 da1f2cfa40c597b72623c78b9646cfe0 235 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 15 234 2.0E-81 T 25-04-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CLFO_RS11255 da1f2cfa40c597b72623c78b9646cfe0 235 Gene3D G3DSA:3.30.160.20 168 233 5.0E-28 T 25-04-2017 IPR014720 Double-stranded RNA-binding domain CLFO_RS11255 da1f2cfa40c597b72623c78b9646cfe0 235 ProSitePatterns PS00517 Ribonuclease III family signature. 51 59 - T 25-04-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CLFO_RS00310 f9f0833fa4104fda9b491f0a5d0c2bd6 296 Pfam PF00288 GHMP kinases N terminal domain 79 126 7.5E-9 T 25-04-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 CLFO_RS00310 f9f0833fa4104fda9b491f0a5d0c2bd6 296 SUPERFAMILY SSF54211 1 141 2.58E-22 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS00310 f9f0833fa4104fda9b491f0a5d0c2bd6 296 PIRSF PIRSF033887 1 283 9.5E-84 T 25-04-2017 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00040+2.7.1.17|KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 CLFO_RS00310 f9f0833fa4104fda9b491f0a5d0c2bd6 296 Gene3D G3DSA:3.30.230.10 34 126 1.3E-12 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS19420 13633d01017d64b8ac25895bee5880a9 276 Pfam PF02673 Bacitracin resistance protein BacA 6 267 1.9E-67 T 25-04-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CLFO_RS19420 13633d01017d64b8ac25895bee5880a9 276 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 273 16.861 T 25-04-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CLFO_RS20305 c4d99dd890127f2026739aa28496fb49 148 Gene3D G3DSA:3.30.70.260 69 143 4.4E-9 T 25-04-2017 CLFO_RS20305 c4d99dd890127f2026739aa28496fb49 148 Pfam PF13291 ACT domain 72 143 2.3E-7 T 25-04-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CLFO_RS20305 c4d99dd890127f2026739aa28496fb49 148 SUPERFAMILY SSF55021 72 144 5.86E-9 T 25-04-2017 CLFO_RS20305 c4d99dd890127f2026739aa28496fb49 148 PIRSF PIRSF025624 1 148 2.5E-56 T 25-04-2017 IPR008310 UPF0735 ACT domain-containing protein GO:0009094 CLFO_RS20305 c4d99dd890127f2026739aa28496fb49 148 Hamap MF_00707 UPF0735 ACT domain-containing protein . 4 148 32.462 T 25-04-2017 IPR008310 UPF0735 ACT domain-containing protein GO:0009094 CLFO_RS20230 08abfade6a3da9295865673f90039580 335 TIGRFAM TIGR02910 sulfite_red_A: sulfite reductase, subunit A 1 333 5.8E-149 T 25-04-2017 IPR014259 Sulphite reductase, subunit A CLFO_RS20230 08abfade6a3da9295865673f90039580 335 Pfam PF17179 4Fe-4S dicluster domain 222 318 4.2E-30 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS20230 08abfade6a3da9295865673f90039580 335 SUPERFAMILY SSF46548 201 331 7.5E-14 T 25-04-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 CLFO_RS20230 08abfade6a3da9295865673f90039580 335 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 304 315 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS20230 08abfade6a3da9295865673f90039580 335 Gene3D G3DSA:1.10.1060.10 220 331 3.0E-9 T 25-04-2017 CLFO_RS02710 4ce07fbdb6bc0da7eda29b134ff05bc2 1474 Pfam PF00395 S-layer homology domain 1295 1337 6.4E-8 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS02710 4ce07fbdb6bc0da7eda29b134ff05bc2 1474 Pfam PF00395 S-layer homology domain 1420 1462 9.7E-5 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS02710 4ce07fbdb6bc0da7eda29b134ff05bc2 1474 Pfam PF00395 S-layer homology domain 1355 1398 1.1E-4 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS02710 4ce07fbdb6bc0da7eda29b134ff05bc2 1474 SUPERFAMILY SSF48239 181 360 7.18E-15 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS02710 4ce07fbdb6bc0da7eda29b134ff05bc2 1474 Gene3D G3DSA:1.50.10.20 189 366 6.1E-14 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS02710 4ce07fbdb6bc0da7eda29b134ff05bc2 1474 Pfam PF14478 Domain of unknown function (DUF4430) 728 803 5.1E-17 T 25-04-2017 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 CLFO_RS12770 ba98980d08440f9dd2d97bb52a5ce76b 477 SUPERFAMILY SSF89095 298 403 1.14E-27 T 25-04-2017 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CLFO_RS12770 ba98980d08440f9dd2d97bb52a5ce76b 477 SUPERFAMILY SSF55931 4 297 1.7E-122 T 25-04-2017 CLFO_RS12770 ba98980d08440f9dd2d97bb52a5ce76b 477 Gene3D G3DSA:1.10.10.410 418 476 7.7E-7 T 25-04-2017 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CLFO_RS12770 ba98980d08440f9dd2d97bb52a5ce76b 477 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 25-04-2017 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CLFO_RS12770 ba98980d08440f9dd2d97bb52a5ce76b 477 SMART SM00845 329 475 3.8E-69 T 25-04-2017 IPR018027 Asn/Gln amidotransferase GO:0016884 CLFO_RS12770 ba98980d08440f9dd2d97bb52a5ce76b 477 Pfam PF02934 GatB/GatE catalytic domain 6 290 1.3E-117 T 25-04-2017 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CLFO_RS12770 ba98980d08440f9dd2d97bb52a5ce76b 477 Pfam PF02637 GatB domain 329 475 1.3E-50 T 25-04-2017 IPR018027 Asn/Gln amidotransferase GO:0016884 CLFO_RS12770 ba98980d08440f9dd2d97bb52a5ce76b 477 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 3 476 8.1E-185 T 25-04-2017 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CLFO_RS12770 ba98980d08440f9dd2d97bb52a5ce76b 477 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 476 38.864 T 25-04-2017 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CLFO_RS04430 704bed2059487bb349e82918b582b981 164 SMART SM00900 71 162 1.4E-10 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS04430 704bed2059487bb349e82918b582b981 164 Pfam PF04205 FMN-binding domain 75 159 1.6E-8 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS20730 59ecb63acd9a034a5e15dd2a215a7cac 217 Pfam PF04205 FMN-binding domain 113 211 7.7E-8 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS20730 59ecb63acd9a034a5e15dd2a215a7cac 217 Gene3D G3DSA:3.30.457.10 66 101 2.9E-6 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS20730 59ecb63acd9a034a5e15dd2a215a7cac 217 Gene3D G3DSA:3.30.457.10 26 65 2.2E-6 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS20730 59ecb63acd9a034a5e15dd2a215a7cac 217 SUPERFAMILY SSF55383 23 78 7.45E-8 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS20730 59ecb63acd9a034a5e15dd2a215a7cac 217 Pfam PF07833 Copper amine oxidase N-terminal domain 23 83 4.2E-10 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS11555 ae4a086d3d1144854863db64199f5550 1134 SMART SM00487 359 552 2.4E-17 T 25-04-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLFO_RS11555 ae4a086d3d1144854863db64199f5550 1134 SUPERFAMILY SSF52540 326 559 5.61E-32 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11555 ae4a086d3d1144854863db64199f5550 1134 Pfam PF00271 Helicase conserved C-terminal domain 632 732 2.0E-6 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS11555 ae4a086d3d1144854863db64199f5550 1134 Gene3D G3DSA:3.40.50.300 359 530 1.9E-28 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11555 ae4a086d3d1144854863db64199f5550 1134 Pfam PF04851 Type III restriction enzyme, res subunit 362 519 3.5E-35 T 25-04-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CLFO_RS11555 ae4a086d3d1144854863db64199f5550 1134 SUPERFAMILY SSF52540 603 742 4.04E-14 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11555 ae4a086d3d1144854863db64199f5550 1134 SUPERFAMILY SSF52540 478 518 4.04E-14 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11555 ae4a086d3d1144854863db64199f5550 1134 Pfam PF13643 Domain of unknown function (DUF4145) 24 114 6.2E-9 T 25-04-2017 IPR025285 Domain of unknown function DUF4145 CLFO_RS11555 ae4a086d3d1144854863db64199f5550 1134 Pfam PF08463 EcoEI R protein C-terminal 981 1124 1.4E-15 T 25-04-2017 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 CLFO_RS11555 ae4a086d3d1144854863db64199f5550 1134 Gene3D G3DSA:3.40.50.300 626 761 1.9E-10 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09145 23742bec8b21d40612228a93cb488ee8 253 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 133 252 2.1E-52 T 25-04-2017 IPR014258 CAP domain, YkwD-like CLFO_RS09145 23742bec8b21d40612228a93cb488ee8 253 SUPERFAMILY SSF55797 134 245 1.18E-21 T 25-04-2017 IPR014044 CAP domain CLFO_RS09145 23742bec8b21d40612228a93cb488ee8 253 Gene3D G3DSA:3.40.33.10 134 248 3.6E-10 T 25-04-2017 IPR014044 CAP domain CLFO_RS09145 23742bec8b21d40612228a93cb488ee8 253 Pfam PF00188 Cysteine-rich secretory protein family 141 244 3.4E-18 T 25-04-2017 IPR014044 CAP domain CLFO_RS12920 4f8a5b10fd8a02a95e92ec84171bb2e8 304 SUPERFAMILY SSF103481 40 142 4.84E-19 T 25-04-2017 CLFO_RS12920 4f8a5b10fd8a02a95e92ec84171bb2e8 304 Pfam PF00892 EamA-like transporter family 6 140 3.0E-29 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS12920 4f8a5b10fd8a02a95e92ec84171bb2e8 304 Pfam PF00892 EamA-like transporter family 154 286 2.0E-24 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS12920 4f8a5b10fd8a02a95e92ec84171bb2e8 304 SUPERFAMILY SSF103481 191 286 4.97E-13 T 25-04-2017 CLFO_RS13255 1d55497899fc09cd18d3b91b9ccc8818 32 Gene3D G3DSA:1.10.10.10 2 29 1.6E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13255 1d55497899fc09cd18d3b91b9ccc8818 32 SUPERFAMILY SSF46785 2 30 1.14E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13255 1d55497899fc09cd18d3b91b9ccc8818 32 Pfam PF03551 Transcriptional regulator PadR-like family 2 30 1.9E-5 T 25-04-2017 IPR005149 Transcription regulator PadR, N-terminal CLFO_RS03990 93928fc0a3566df604ae41893325f63c 247 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 4 243 5.2E-87 T 25-04-2017 IPR023875 DNA metabolism protein, putative CLFO_RS03990 93928fc0a3566df604ae41893325f63c 247 Pfam PF13566 Domain of unknown function (DUF4130 84 243 3.6E-54 T 25-04-2017 IPR025404 Domain of unknown function DUF4130 CLFO_RS12990 396cae96386234293562d822317e9bcb 326 SMART SM00382 41 184 7.8E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12990 396cae96386234293562d822317e9bcb 326 Gene3D G3DSA:3.40.50.300 25 192 5.1E-52 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12990 396cae96386234293562d822317e9bcb 326 Gene3D G3DSA:1.10.10.60 270 322 1.8E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS12990 396cae96386234293562d822317e9bcb 326 SUPERFAMILY SSF52540 24 264 1.91E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12990 396cae96386234293562d822317e9bcb 326 Pfam PF00158 Sigma-54 interaction domain 23 187 9.2E-64 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS12990 396cae96386234293562d822317e9bcb 326 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 107 122 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS12990 396cae96386234293562d822317e9bcb 326 Pfam PF02954 Bacterial regulatory protein, Fis family 283 320 1.9E-9 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS12990 396cae96386234293562d822317e9bcb 326 Gene3D G3DSA:1.10.8.60 193 269 5.1E-23 T 25-04-2017 CLFO_RS12990 396cae96386234293562d822317e9bcb 326 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 45 58 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS12990 396cae96386234293562d822317e9bcb 326 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 234 243 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS12990 396cae96386234293562d822317e9bcb 326 SUPERFAMILY SSF46689 235 322 1.88E-12 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS10025 7e59c65fd496b7f78c8843b0a0961eb4 182 SMART SM00877 3 77 3.5E-19 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS10025 7e59c65fd496b7f78c8843b0a0961eb4 182 SMART SM00877 95 173 9.4E-23 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS10025 7e59c65fd496b7f78c8843b0a0961eb4 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 59 4.0E-13 T 25-04-2017 CLFO_RS10025 7e59c65fd496b7f78c8843b0a0961eb4 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 155 3.0E-14 T 25-04-2017 CLFO_RS10025 7e59c65fd496b7f78c8843b0a0961eb4 182 Pfam PF00936 BMC domain 96 173 8.1E-19 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS10025 7e59c65fd496b7f78c8843b0a0961eb4 182 Pfam PF00936 BMC domain 4 76 1.1E-19 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS10025 7e59c65fd496b7f78c8843b0a0961eb4 182 SUPERFAMILY SSF143414 3 93 8.76E-23 T 25-04-2017 CLFO_RS10025 7e59c65fd496b7f78c8843b0a0961eb4 182 PIRSF PIRSF034834 1 182 3.8E-59 T 25-04-2017 IPR011238 Polyhedral organelle shell protein PduT CLFO_RS10025 7e59c65fd496b7f78c8843b0a0961eb4 182 SUPERFAMILY SSF143414 95 181 6.67E-22 T 25-04-2017 CLFO_RS07335 3c4d713c206f6f6dc6b75b7444887f99 208 Gene3D G3DSA:1.10.601.10 4 90 1.8E-16 T 25-04-2017 CLFO_RS07335 3c4d713c206f6f6dc6b75b7444887f99 208 SUPERFAMILY SSF88946 9 98 4.45E-21 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07335 3c4d713c206f6f6dc6b75b7444887f99 208 Gene3D G3DSA:1.10.260.40 162 195 8.8E-7 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS07335 3c4d713c206f6f6dc6b75b7444887f99 208 SUPERFAMILY SSF88659 117 203 4.9E-8 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07335 3c4d713c206f6f6dc6b75b7444887f99 208 Pfam PF04545 Sigma-70, region 4 159 200 4.4E-7 T 25-04-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07335 3c4d713c206f6f6dc6b75b7444887f99 208 Pfam PF04542 Sigma-70 region 2 37 99 4.1E-12 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07335 3c4d713c206f6f6dc6b75b7444887f99 208 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 202 1.4E-24 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20035 c27c518d7bb0816c7b7fddc843e53c53 417 PIRSF PIRSF004911 1 399 1.2E-166 T 25-04-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CLFO_RS20035 c27c518d7bb0816c7b7fddc843e53c53 417 Pfam PF12544 Lysine-2,3-aminomutase 313 416 1.4E-41 T 25-04-2017 IPR025895 Lysine-2,3-aminomutase, C-terminal domain CLFO_RS20035 c27c518d7bb0816c7b7fddc843e53c53 417 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 13 413 2.8E-191 T 25-04-2017 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 CLFO_RS20035 c27c518d7bb0816c7b7fddc843e53c53 417 Gene3D G3DSA:3.20.20.70 105 340 4.0E-24 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS20035 c27c518d7bb0816c7b7fddc843e53c53 417 SUPERFAMILY SSF102114 106 348 2.22E-36 T 25-04-2017 CLFO_RS20035 c27c518d7bb0816c7b7fddc843e53c53 417 Pfam PF04055 Radical SAM superfamily 122 269 1.8E-12 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS20035 c27c518d7bb0816c7b7fddc843e53c53 417 TIGRFAM TIGR00238 TIGR00238: KamA family protein 8 334 2.7E-118 T 25-04-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CLFO_RS12825 7c6f5e7e6fa8c640916c8463ecaeec9f 127 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 35 101 7.8E-15 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS12825 7c6f5e7e6fa8c640916c8463ecaeec9f 127 Gene3D G3DSA:3.40.50.300 6 60 2.3E-10 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12825 7c6f5e7e6fa8c640916c8463ecaeec9f 127 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 33 121 6.4E-25 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS12825 7c6f5e7e6fa8c640916c8463ecaeec9f 127 SUPERFAMILY SSF52540 5 118 8.27E-11 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12265 0ca509ab6af3c85da3a34d132446dbfb 369 Gene3D G3DSA:2.60.40.1630 80 225 4.4E-30 T 25-04-2017 CLFO_RS12265 0ca509ab6af3c85da3a34d132446dbfb 369 Gene3D G3DSA:2.60.40.1640 231 369 3.4E-37 T 25-04-2017 CLFO_RS12265 0ca509ab6af3c85da3a34d132446dbfb 369 Pfam PF13786 Domain of unknown function (DUF4179) 45 139 1.4E-15 T 25-04-2017 IPR025436 Domain of unknown function DUF4179 CLFO_RS07210 5f9ad8bd871b92f60d9abd32af9c2683 80 Pfam PF03698 Uncharacterised protein family (UPF0180) 3 78 2.9E-27 T 25-04-2017 IPR005370 Uncharacterised protein family UPF0180 CLFO_RS08060 6f3e606e5e5942e687c808298ee05823 151 SMART SM00530 6 61 2.9E-17 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS08060 6f3e606e5e5942e687c808298ee05823 151 Gene3D G3DSA:1.10.260.40 4 102 6.0E-22 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS08060 6f3e606e5e5942e687c808298ee05823 151 SUPERFAMILY SSF47413 1 69 6.7E-19 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS08060 6f3e606e5e5942e687c808298ee05823 151 Pfam PF01381 Helix-turn-helix 7 61 1.1E-16 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS21165 db6cb0a87607f675ded74557e2e721b2 677 SUPERFAMILY SSF52540 198 390 9.07E-26 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21165 db6cb0a87607f675ded74557e2e721b2 677 SUPERFAMILY SSF52540 1 129 9.07E-26 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21165 db6cb0a87607f675ded74557e2e721b2 677 Gene3D G3DSA:3.40.50.300 160 394 9.1E-32 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21165 db6cb0a87607f675ded74557e2e721b2 677 Gene3D G3DSA:3.40.50.300 1 106 9.1E-32 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21165 db6cb0a87607f675ded74557e2e721b2 677 Pfam PF13175 AAA ATPase domain 1 362 2.2E-40 T 25-04-2017 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 Pfam PF04545 Sigma-70, region 4 185 238 1.4E-15 T 25-04-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 PIRSF PIRSF000770 18 244 8.1E-69 T 25-04-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 91 104 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 SUPERFAMILY SSF88946 19 136 6.44E-34 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 Pfam PF04542 Sigma-70 region 2 67 136 3.1E-18 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 Gene3D G3DSA:1.10.10.10 180 240 3.1E-16 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 Gene3D G3DSA:1.10.601.10 42 135 9.6E-29 T 25-04-2017 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 67 239 8.2E-34 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 SUPERFAMILY SSF88659 148 242 6.54E-22 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 14 244 2.4E-125 T 25-04-2017 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 PRINTS PR00046 Major sigma-70 factor signature 91 104 2.4E-11 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 PRINTS PR00046 Major sigma-70 factor signature 210 225 2.4E-11 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 PRINTS PR00046 Major sigma-70 factor signature 225 236 2.4E-11 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11685 99520ae2899a0c14d8186aaa73c5db76 244 PRINTS PR00046 Major sigma-70 factor signature 189 201 2.4E-11 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12545 975e9c2493291c9af6c25fd6fd47ad3f 344 SUPERFAMILY SSF48019 224 343 3.15E-22 T 25-04-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CLFO_RS12545 975e9c2493291c9af6c25fd6fd47ad3f 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 343 1.2E-67 T 25-04-2017 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CLFO_RS12545 975e9c2493291c9af6c25fd6fd47ad3f 344 SUPERFAMILY SSF52540 3 217 2.32E-20 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12545 975e9c2493291c9af6c25fd6fd47ad3f 344 Gene3D G3DSA:3.40.50.300 3 143 3.7E-22 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12545 975e9c2493291c9af6c25fd6fd47ad3f 344 Pfam PF06144 DNA polymerase III, delta subunit 19 178 6.3E-38 T 25-04-2017 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CLFO_RS12545 975e9c2493291c9af6c25fd6fd47ad3f 344 Gene3D G3DSA:1.10.8.60 148 241 1.2E-7 T 25-04-2017 CLFO_RS15740 710b16c56c3acb7cdb6869f5fa04c8af 243 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 243 4.6E-100 T 25-04-2017 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 CLFO_RS15740 710b16c56c3acb7cdb6869f5fa04c8af 243 Pfam PF00005 ABC transporter 18 173 5.2E-34 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15740 710b16c56c3acb7cdb6869f5fa04c8af 243 Gene3D G3DSA:3.40.50.300 1 237 1.6E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15740 710b16c56c3acb7cdb6869f5fa04c8af 243 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15740 710b16c56c3acb7cdb6869f5fa04c8af 243 SMART SM00382 27 231 1.7E-9 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15740 710b16c56c3acb7cdb6869f5fa04c8af 243 SUPERFAMILY SSF52540 1 238 3.41E-64 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05035 231c96872231ed97c7382730a4acb621 237 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 233 42.903 T 25-04-2017 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 CLFO_RS05035 231c96872231ed97c7382730a4acb621 237 Gene3D G3DSA:2.160.10.10 87 225 4.8E-48 T 25-04-2017 CLFO_RS05035 231c96872231ed97c7382730a4acb621 237 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 1 85 7.1E-34 T 25-04-2017 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 CLFO_RS05035 231c96872231ed97c7382730a4acb621 237 Gene3D G3DSA:3.30.70.250 1 85 3.7E-34 T 25-04-2017 CLFO_RS05035 231c96872231ed97c7382730a4acb621 237 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 172 200 - T 25-04-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CLFO_RS05035 231c96872231ed97c7382730a4acb621 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 154 7.9E-7 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS05035 231c96872231ed97c7382730a4acb621 237 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 163 198 1.8E-10 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS05035 231c96872231ed97c7382730a4acb621 237 SUPERFAMILY SSF51161 87 224 1.07E-49 T 25-04-2017 IPR011004 Trimeric LpxA-like CLFO_RS05035 231c96872231ed97c7382730a4acb621 237 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 3 234 1.1E-113 T 25-04-2017 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 CLFO_RS15990 5081ff79f01368e5a08ddd0c9d97e124 53 Gene3D G3DSA:3.30.479.10 1 26 3.0E-9 T 25-04-2017 CLFO_RS15990 5081ff79f01368e5a08ddd0c9d97e124 53 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 1 26 9.2E-7 T 25-04-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CLFO_RS15990 5081ff79f01368e5a08ddd0c9d97e124 53 SUPERFAMILY SSF55620 1 46 7.78E-13 T 25-04-2017 CLFO_RS04365 4a3243763146fbabafeaa22ec6844b29 227 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 28 226 1.4E-84 T 25-04-2017 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 CLFO_RS04365 4a3243763146fbabafeaa22ec6844b29 227 Gene3D G3DSA:1.10.101.10 29 98 4.0E-26 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS04365 4a3243763146fbabafeaa22ec6844b29 227 Pfam PF07486 Cell Wall Hydrolase 128 225 3.2E-30 T 25-04-2017 IPR011105 Cell wall hydrolase, SleB GO:0016787 CLFO_RS04365 4a3243763146fbabafeaa22ec6844b29 227 Pfam PF01471 Putative peptidoglycan binding domain 36 92 1.2E-22 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS04365 4a3243763146fbabafeaa22ec6844b29 227 SUPERFAMILY SSF47090 30 97 2.2E-23 T 25-04-2017 IPR002477 Peptidoglycan binding-like CLFO_RS13455 e48d514c7ed5dac27ace97b3c8e63e78 132 Pfam PF03965 Penicillinase repressor 7 120 4.5E-36 T 25-04-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLFO_RS13455 e48d514c7ed5dac27ace97b3c8e63e78 132 Gene3D G3DSA:1.10.10.10 3 79 6.0E-30 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13455 e48d514c7ed5dac27ace97b3c8e63e78 132 PIRSF PIRSF019455 1 132 1.2E-42 T 25-04-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CLFO_RS13455 e48d514c7ed5dac27ace97b3c8e63e78 132 SUPERFAMILY SSF46785 5 123 9.62E-37 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16310 bbe8d9a1111c6fec2551317b9cffde0b 394 Gene3D G3DSA:3.30.420.130 277 389 9.6E-34 T 25-04-2017 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLFO_RS16310 bbe8d9a1111c6fec2551317b9cffde0b 394 SUPERFAMILY SSF52540 26 253 2.16E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16310 bbe8d9a1111c6fec2551317b9cffde0b 394 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 30 253 1.4E-88 T 25-04-2017 IPR019591 Mrp/NBP35 ATP-binding protein CLFO_RS16310 bbe8d9a1111c6fec2551317b9cffde0b 394 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 285 372 1.5E-20 T 25-04-2017 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLFO_RS16310 bbe8d9a1111c6fec2551317b9cffde0b 394 Hamap MF_02040 Iron-sulfur cluster carrier protein. 26 269 34.49 T 25-04-2017 IPR019591 Mrp/NBP35 ATP-binding protein CLFO_RS16310 bbe8d9a1111c6fec2551317b9cffde0b 394 Gene3D G3DSA:3.40.50.300 24 254 3.5E-87 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16310 bbe8d9a1111c6fec2551317b9cffde0b 394 SUPERFAMILY SSF53146 277 391 5.1E-33 T 25-04-2017 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLFO_RS17375 1d557c11edca85a310fae59184ebb701 120 Pfam PF12666 PrgI family protein 6 96 2.4E-24 T 25-04-2017 IPR024414 Uncharacterised protein family PrgI CLFO_RS19915 f4813d3e1f51fe3e53f29699c1c514a6 163 Gene3D G3DSA:2.30.110.10 3 136 6.0E-20 T 25-04-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CLFO_RS19915 f4813d3e1f51fe3e53f29699c1c514a6 163 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 11 94 7.8E-10 T 25-04-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CLFO_RS19915 f4813d3e1f51fe3e53f29699c1c514a6 163 SUPERFAMILY SSF50475 11 132 6.17E-19 T 25-04-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CLFO_RS11205 c80c63a7ae220303d09f93f077f199c6 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 114 31.26 T 25-04-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11205 c80c63a7ae220303d09f93f077f199c6 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 25-04-2017 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS11205 c80c63a7ae220303d09f93f077f199c6 116 PIRSF PIRSF002191 1 116 2.5E-48 T 25-04-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11205 c80c63a7ae220303d09f93f077f199c6 116 PRINTS PR00061 Ribosomal protein L19 signature 3 32 1.1E-39 T 25-04-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11205 c80c63a7ae220303d09f93f077f199c6 116 PRINTS PR00061 Ribosomal protein L19 signature 33 62 1.1E-39 T 25-04-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11205 c80c63a7ae220303d09f93f077f199c6 116 PRINTS PR00061 Ribosomal protein L19 signature 63 86 1.1E-39 T 25-04-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11205 c80c63a7ae220303d09f93f077f199c6 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 113 2.2E-48 T 25-04-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11205 c80c63a7ae220303d09f93f077f199c6 116 SUPERFAMILY SSF50104 1 107 3.31E-45 T 25-04-2017 IPR008991 Translation protein SH3-like domain CLFO_RS11205 c80c63a7ae220303d09f93f077f199c6 116 Pfam PF01245 Ribosomal protein L19 3 113 9.3E-50 T 25-04-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS08080 798701dd0cc32cccea3b4b68e222cf26 157 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 46 115 8.7E-17 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS08080 798701dd0cc32cccea3b4b68e222cf26 157 Gene3D G3DSA:1.10.10.630 42 115 3.6E-20 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS08080 798701dd0cc32cccea3b4b68e222cf26 157 Pfam PF07261 Replication initiation and membrane attachment 49 117 2.9E-18 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS08080 798701dd0cc32cccea3b4b68e222cf26 157 SUPERFAMILY SSF158499 47 109 1.7E-15 T 25-04-2017 IPR006343 Replication protein, DnaD/DnaB domain CLFO_RS01220 461e565ed28ef54bc6ecef53dd9d463c 333 Pfam PF04754 Putative transposase, YhgA-like 6 212 3.3E-65 T 25-04-2017 IPR006842 Transposase (putative), YhgA-like CLFO_RS01220 461e565ed28ef54bc6ecef53dd9d463c 333 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 7 275 2.3E-16 T 25-04-2017 IPR010106 Conserved hypothetical protein CHP01784 CLFO_RS16465 0a4b43bc5b498a81c909af2e970132ed 271 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS16465 0a4b43bc5b498a81c909af2e970132ed 271 Pfam PF00005 ABC transporter 22 178 4.5E-26 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS16465 0a4b43bc5b498a81c909af2e970132ed 271 SUPERFAMILY SSF52540 3 260 4.02E-56 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16465 0a4b43bc5b498a81c909af2e970132ed 271 Gene3D G3DSA:3.40.50.300 2 252 9.7E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16465 0a4b43bc5b498a81c909af2e970132ed 271 SMART SM00382 30 228 6.5E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS21345 6b8b895d98a9c8a262098b7fb54493d9 545 SUPERFAMILY SSF48019 243 367 2.61E-19 T 25-04-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CLFO_RS21345 6b8b895d98a9c8a262098b7fb54493d9 545 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 360 1.3E-13 T 25-04-2017 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CLFO_RS21345 6b8b895d98a9c8a262098b7fb54493d9 545 Pfam PF13177 DNA polymerase III, delta subunit 22 178 1.5E-45 T 25-04-2017 CLFO_RS21345 6b8b895d98a9c8a262098b7fb54493d9 545 Gene3D G3DSA:1.20.272.10 243 359 8.9E-12 T 25-04-2017 CLFO_RS21345 6b8b895d98a9c8a262098b7fb54493d9 545 SUPERFAMILY SSF52540 33 224 1.29E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21345 6b8b895d98a9c8a262098b7fb54493d9 545 Gene3D G3DSA:3.40.50.300 15 166 8.5E-68 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21345 6b8b895d98a9c8a262098b7fb54493d9 545 Gene3D G3DSA:1.10.8.60 167 242 1.9E-30 T 25-04-2017 CLFO_RS21345 6b8b895d98a9c8a262098b7fb54493d9 545 SMART SM00382 37 179 6.5E-9 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS21345 6b8b895d98a9c8a262098b7fb54493d9 545 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 359 6.8E-141 T 25-04-2017 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CLFO_RS05175 55fec403fb8ab7147990b8c03935bf2d 118 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 6 108 1.7E-25 T 25-04-2017 IPR022551 Protein of unknown function DUF2847 CLFO_RS05175 55fec403fb8ab7147990b8c03935bf2d 118 Pfam PF11009 Protein of unknown function (DUF2847) 6 108 3.2E-28 T 25-04-2017 IPR022551 Protein of unknown function DUF2847 CLFO_RS05175 55fec403fb8ab7147990b8c03935bf2d 118 SUPERFAMILY SSF52833 7 116 1.21E-5 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS05175 55fec403fb8ab7147990b8c03935bf2d 118 Gene3D G3DSA:3.40.30.10 12 115 3.2E-4 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS11145 5aaef80771eb100594c90fbc90b4080c 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 5.1E-14 T 25-04-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLFO_RS11145 5aaef80771eb100594c90fbc90b4080c 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 66 82 5.1E-14 T 25-04-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLFO_RS11145 5aaef80771eb100594c90fbc90b4080c 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 87 100 5.1E-14 T 25-04-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLFO_RS11145 5aaef80771eb100594c90fbc90b4080c 102 Pfam PF02049 Flagellar hook-basal body complex protein FliE 24 102 1.8E-28 T 25-04-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLFO_RS11145 5aaef80771eb100594c90fbc90b4080c 102 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 6 102 17.675 T 25-04-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLFO_RS11145 5aaef80771eb100594c90fbc90b4080c 102 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 15 102 5.5E-22 T 25-04-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 Gene3D G3DSA:3.75.10.10 7 69 8.0E-123 T 25-04-2017 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 Gene3D G3DSA:3.75.10.10 155 403 8.0E-123 T 25-04-2017 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 Pfam PF02274 Amidinotransferase 21 402 3.4E-87 T 25-04-2017 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 SUPERFAMILY SSF55909 6 404 3.03E-123 T 25-04-2017 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 Hamap MF_00242 Arginine deiminase [arcA]. 4 405 43.725 T 25-04-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 PRINTS PR01466 Bacterial arginine deiminase signature 182 197 6.2E-54 T 25-04-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 PRINTS PR01466 Bacterial arginine deiminase signature 384 402 6.2E-54 T 25-04-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 PRINTS PR01466 Bacterial arginine deiminase signature 361 375 6.2E-54 T 25-04-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 PRINTS PR01466 Bacterial arginine deiminase signature 154 172 6.2E-54 T 25-04-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 PRINTS PR01466 Bacterial arginine deiminase signature 5 25 6.2E-54 T 25-04-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 PRINTS PR01466 Bacterial arginine deiminase signature 341 358 6.2E-54 T 25-04-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 PIRSF PIRSF006356 1 405 1.3E-156 T 25-04-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 Gene3D G3DSA:1.10.3930.10 71 154 1.8E-16 T 25-04-2017 CLFO_RS07175 4ac42e91fb42cff62cce259b612b6bfa 405 TIGRFAM TIGR01078 arcA: arginine deiminase 7 404 3.3E-154 T 25-04-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CLFO_RS09820 182a3bd0e2bf70345c6ae4a196962f56 294 Gene3D G3DSA:1.10.443.10 110 287 2.7E-54 T 25-04-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS09820 182a3bd0e2bf70345c6ae4a196962f56 294 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 87 4.7E-18 T 25-04-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLFO_RS09820 182a3bd0e2bf70345c6ae4a196962f56 294 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 294 7.9E-112 T 25-04-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CLFO_RS09820 182a3bd0e2bf70345c6ae4a196962f56 294 SUPERFAMILY SSF56349 3 288 4.41E-56 T 25-04-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLFO_RS09820 182a3bd0e2bf70345c6ae4a196962f56 294 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 294 53.978 T 25-04-2017 IPR023009 Tyrosine recombinase XerC/XerD CLFO_RS09820 182a3bd0e2bf70345c6ae4a196962f56 294 Gene3D G3DSA:1.10.150.130 1 97 1.5E-23 T 25-04-2017 IPR023109 Integrase/recombinase, N-terminal CLFO_RS09820 182a3bd0e2bf70345c6ae4a196962f56 294 Pfam PF00589 Phage integrase family 111 280 9.8E-48 T 25-04-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS19855 33ef2f0231292186dc4b7ba737a67282 366 SUPERFAMILY SSF88723 167 293 2.16E-23 T 25-04-2017 IPR029060 PIN domain-like CLFO_RS19855 33ef2f0231292186dc4b7ba737a67282 366 SMART SM00670 165 272 2.7E-7 T 25-04-2017 IPR002716 PIN domain CLFO_RS19855 33ef2f0231292186dc4b7ba737a67282 366 Gene3D G3DSA:3.40.50.1010 167 294 3.3E-30 T 25-04-2017 IPR029060 PIN domain-like CLFO_RS00650 e72710de874631e57bef78310fb528eb 115 SUPERFAMILY SSF57997 10 108 8.5E-5 T 25-04-2017 CLFO_RS00650 e72710de874631e57bef78310fb528eb 115 Gene3D G3DSA:1.20.5.50 9 100 2.3E-4 T 25-04-2017 CLFO_RS13110 4c2c81e40d25653c1cebd3e2bb14f31b 331 Pfam PF13407 Periplasmic binding protein domain 47 298 1.1E-47 T 25-04-2017 IPR025997 Periplasmic binding protein CLFO_RS13110 4c2c81e40d25653c1cebd3e2bb14f31b 331 SUPERFAMILY SSF53822 40 321 3.46E-59 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS13110 4c2c81e40d25653c1cebd3e2bb14f31b 331 Gene3D G3DSA:3.40.50.2300 37 164 2.5E-22 T 25-04-2017 CLFO_RS13110 4c2c81e40d25653c1cebd3e2bb14f31b 331 Gene3D G3DSA:3.40.50.2300 165 321 4.2E-40 T 25-04-2017 CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 SUPERFAMILY SSF52540 313 712 3.52E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 Pfam PF14490 Helix-hairpin-helix containing domain 138 228 2.3E-33 T 25-04-2017 IPR029493 RecD helicase-like helix-hairpin-helix domain CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 Pfam PF13538 UvrD-like helicase C-terminal domain 659 706 9.8E-19 T 25-04-2017 IPR027785 UvrD-like helicase C-terminal domain CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 SUPERFAMILY SSF47781 88 156 8.68E-12 T 25-04-2017 IPR010994 RuvA domain 2-like CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 Pfam PF13604 AAA domain 319 501 4.3E-44 T 25-04-2017 CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 Gene3D G3DSA:3.40.50.300 650 710 7.6E-22 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 Gene3D G3DSA:3.40.50.300 131 158 7.6E-22 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 4 731 2.4E-212 T 25-04-2017 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 SMART SM00382 332 477 2.4E-6 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 1 735 28.701 T 25-04-2017 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 Gene3D G3DSA:3.40.50.300 303 500 2.6E-50 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 Pfam PF14520 Helix-hairpin-helix domain 88 137 3.0E-8 T 25-04-2017 CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 SMART SM00278 88 102 230.0 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 SMART SM00278 116 135 0.068 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 SMART SM00278 180 199 660.0 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS01330 2290e513c118d56919276f9cb0fa1490 741 Gene3D G3DSA:1.10.150.20 88 130 2.8E-7 T 25-04-2017 CLFO_RS02930 d257ad8ecee988bd1b438901130f2e0a 98 SUPERFAMILY SSF54862 28 96 8.39E-18 T 25-04-2017 CLFO_RS02930 d257ad8ecee988bd1b438901130f2e0a 98 Gene3D G3DSA:3.30.70.20 28 97 9.7E-15 T 25-04-2017 CLFO_RS02930 d257ad8ecee988bd1b438901130f2e0a 98 TIGRFAM TIGR02179 PorD_KorD: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 31 98 6.1E-25 T 25-04-2017 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0051539 CLFO_RS02930 d257ad8ecee988bd1b438901130f2e0a 98 Pfam PF00037 4Fe-4S binding domain 71 93 1.0E-5 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS13950 d9222efec5624555839193a048b4b265 291 Gene3D G3DSA:1.10.3720.10 4 270 8.8E-20 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS13950 d9222efec5624555839193a048b4b265 291 SUPERFAMILY SSF161098 5 277 5.89E-26 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS06055 62934f30099a8c780082439a042bba5c 215 Gene3D G3DSA:1.10.357.10 3 132 1.4E-12 T 25-04-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLFO_RS06055 62934f30099a8c780082439a042bba5c 215 SUPERFAMILY SSF46689 4 65 5.13E-10 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS06055 62934f30099a8c780082439a042bba5c 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 57 8.0E-8 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS03485 b6a0ea871734ff890323117cb8073554 123 Pfam PF01797 Transposase IS200 like 13 123 1.3E-16 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS03485 b6a0ea871734ff890323117cb8073554 123 SMART SM01321 9 123 4.5E-35 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS03485 b6a0ea871734ff890323117cb8073554 123 SUPERFAMILY SSF143422 12 123 1.44E-22 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS03485 b6a0ea871734ff890323117cb8073554 123 Gene3D G3DSA:3.30.70.1290 12 123 2.0E-13 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS10310 3f18fbb282cfe03ad4cfe4b2af23e02a 476 Pfam PF00919 Uncharacterized protein family UPF0004 42 141 8.5E-28 T 25-04-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CLFO_RS10310 3f18fbb282cfe03ad4cfe4b2af23e02a 476 Pfam PF01938 TRAM domain 415 475 2.7E-13 T 25-04-2017 IPR002792 TRAM domain CLFO_RS10310 3f18fbb282cfe03ad4cfe4b2af23e02a 476 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 39 476 74.716 T 25-04-2017 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CLFO_RS10310 3f18fbb282cfe03ad4cfe4b2af23e02a 476 Pfam PF04055 Radical SAM superfamily 188 358 2.2E-33 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS10310 3f18fbb282cfe03ad4cfe4b2af23e02a 476 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 188 208 - T 25-04-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 CLFO_RS10310 3f18fbb282cfe03ad4cfe4b2af23e02a 476 SMART SM00729 184 402 6.2E-63 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS10310 3f18fbb282cfe03ad4cfe4b2af23e02a 476 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 44 472 4.8E-156 T 25-04-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CLFO_RS10310 3f18fbb282cfe03ad4cfe4b2af23e02a 476 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 44 475 2.8E-172 T 25-04-2017 CLFO_RS10310 3f18fbb282cfe03ad4cfe4b2af23e02a 476 Gene3D G3DSA:3.80.30.20 184 412 8.6E-86 T 25-04-2017 IPR023404 Radical SAM, alpha/beta horseshoe CLFO_RS10310 3f18fbb282cfe03ad4cfe4b2af23e02a 476 SUPERFAMILY SSF102114 176 407 7.32E-61 T 25-04-2017 CLFO_RS01495 152edd72b495c58a855e39f9ff51ae37 349 Pfam PF03102 NeuB family 38 276 5.8E-96 T 25-04-2017 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 CLFO_RS01495 152edd72b495c58a855e39f9ff51ae37 349 Gene3D G3DSA:3.90.1210.10 292 348 6.5E-25 T 25-04-2017 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 CLFO_RS01495 152edd72b495c58a855e39f9ff51ae37 349 Pfam PF08666 SAF domain 293 349 2.5E-13 T 25-04-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 CLFO_RS01495 152edd72b495c58a855e39f9ff51ae37 349 SUPERFAMILY SSF51269 286 349 4.19E-20 T 25-04-2017 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 CLFO_RS01495 152edd72b495c58a855e39f9ff51ae37 349 SUPERFAMILY SSF51569 5 300 2.08E-92 T 25-04-2017 CLFO_RS01495 152edd72b495c58a855e39f9ff51ae37 349 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 18 343 1.9E-146 T 25-04-2017 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 CLFO_RS01495 152edd72b495c58a855e39f9ff51ae37 349 SMART SM00858 291 349 7.6E-13 T 25-04-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 CLFO_RS01495 152edd72b495c58a855e39f9ff51ae37 349 Gene3D G3DSA:3.20.20.70 6 275 2.6E-112 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS13385 4bba5762497e7b3b8a08b4c037c2bbcd 146 SUPERFAMILY SSF55729 1 137 7.81E-25 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS13385 4bba5762497e7b3b8a08b4c037c2bbcd 146 Pfam PF13527 Acetyltransferase (GNAT) domain 3 135 3.8E-10 T 25-04-2017 CLFO_RS13385 4bba5762497e7b3b8a08b4c037c2bbcd 146 Gene3D G3DSA:3.40.630.30 2 146 1.3E-40 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS02990 dd5a335f9c1f5424ee6fe1346be839b1 445 ProSitePatterns PS00018 EF-hand calcium-binding domain. 145 157 - T 25-04-2017 IPR018247 EF-Hand 1, calcium-binding site CLFO_RS02990 dd5a335f9c1f5424ee6fe1346be839b1 445 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 224 243 - T 25-04-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLFO_RS02990 dd5a335f9c1f5424ee6fe1346be839b1 445 Gene3D G3DSA:3.40.640.10 51 291 5.4E-62 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS02990 dd5a335f9c1f5424ee6fe1346be839b1 445 SUPERFAMILY SSF53383 29 430 5.92E-89 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS02990 dd5a335f9c1f5424ee6fe1346be839b1 445 Pfam PF00266 Aminotransferase class-V 32 422 2.0E-93 T 25-04-2017 IPR000192 Aminotransferase class V domain CLFO_RS02990 dd5a335f9c1f5424ee6fe1346be839b1 445 Gene3D G3DSA:3.90.1150.10 292 428 2.8E-18 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS10390 97413a6ddc381f8e0a3a22f03fa3c0f2 216 Pfam PF01476 LysM domain 166 215 3.1E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS10390 97413a6ddc381f8e0a3a22f03fa3c0f2 216 SUPERFAMILY SSF54106 164 215 3.53E-8 T 25-04-2017 IPR018392 LysM domain CLFO_RS10390 97413a6ddc381f8e0a3a22f03fa3c0f2 216 SMART SM00257 165 215 2.1E-8 T 25-04-2017 IPR018392 LysM domain CLFO_RS10390 97413a6ddc381f8e0a3a22f03fa3c0f2 216 Gene3D G3DSA:3.10.350.10 165 215 6.0E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS16450 ec8044119a8f822789c56a82ab30b016 267 SUPERFAMILY SSF53335 117 219 7.47E-6 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS16450 ec8044119a8f822789c56a82ab30b016 267 Pfam PF03059 Nicotianamine synthase protein 98 236 8.5E-8 T 25-04-2017 IPR004298 Nicotianamine synthase GO:0030410|GO:0030418 MetaCyc: PWY-5912|MetaCyc: PWY-5957 CLFO_RS16450 ec8044119a8f822789c56a82ab30b016 267 Gene3D G3DSA:3.40.50.150 106 210 4.7E-7 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 SUPERFAMILY SSF46689 510 564 1.41E-9 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 Pfam PF00158 Sigma-54 interaction domain 256 424 1.6E-66 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 Gene3D G3DSA:1.10.8.60 430 507 1.2E-22 T 25-04-2017 CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 Gene3D G3DSA:3.40.50.300 253 429 9.9E-54 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 Gene3D G3DSA:1.10.10.60 511 564 8.8E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 SMART SM00382 276 420 4.5E-9 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 SUPERFAMILY SSF52540 256 500 1.24E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 343 358 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 Pfam PF02954 Bacterial regulatory protein, Fis family 524 561 3.1E-6 T 25-04-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 Gene3D G3DSA:3.10.580.10 18 103 9.4E-8 T 25-04-2017 CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 280 293 - T 25-04-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 469 478 - T 25-04-2017 IPR025944 Sigma-54 interaction domain, conserved site CLFO_RS14160 cd4c7bfc6611d458a7344852121ba4e8 567 SUPERFAMILY SSF54631 20 103 9.96E-8 T 25-04-2017 CLFO_RS11535 ef356a73bc5f0fb1ed5f7949b39d6a94 662 Gene3D G3DSA:3.30.450.20 151 278 1.2E-24 T 25-04-2017 CLFO_RS11535 ef356a73bc5f0fb1ed5f7949b39d6a94 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 465 660 5.5E-38 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS11535 ef356a73bc5f0fb1ed5f7949b39d6a94 662 Gene3D G3DSA:1.10.287.950 401 619 2.8E-43 T 25-04-2017 CLFO_RS11535 ef356a73bc5f0fb1ed5f7949b39d6a94 662 Pfam PF00672 HAMP domain 283 353 5.8E-9 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS11535 ef356a73bc5f0fb1ed5f7949b39d6a94 662 SUPERFAMILY SSF58104 392 661 2.22E-63 T 25-04-2017 CLFO_RS11535 ef356a73bc5f0fb1ed5f7949b39d6a94 662 SUPERFAMILY SSF58104 332 359 2.22E-63 T 25-04-2017 CLFO_RS11535 ef356a73bc5f0fb1ed5f7949b39d6a94 662 Pfam PF02743 Cache domain 34 264 1.7E-27 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS11535 ef356a73bc5f0fb1ed5f7949b39d6a94 662 SMART SM00304 302 357 1.4E-5 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS11535 ef356a73bc5f0fb1ed5f7949b39d6a94 662 SUPERFAMILY SSF103190 82 176 3.34E-5 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS11535 ef356a73bc5f0fb1ed5f7949b39d6a94 662 SMART SM00283 386 661 7.6E-58 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS11535 ef356a73bc5f0fb1ed5f7949b39d6a94 662 Gene3D G3DSA:3.30.450.20 80 150 4.3E-15 T 25-04-2017 CLFO_RS10280 9495c5169c5bbbc8b73ba860bca8f13f 201 Gene3D G3DSA:3.40.50.300 3 198 3.9E-23 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10280 9495c5169c5bbbc8b73ba860bca8f13f 201 Pfam PF01926 50S ribosome-binding GTPase 4 146 1.3E-10 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS10280 9495c5169c5bbbc8b73ba860bca8f13f 201 SUPERFAMILY SSF52540 4 22 1.47E-18 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10280 9495c5169c5bbbc8b73ba860bca8f13f 201 SUPERFAMILY SSF52540 51 197 1.47E-18 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11670 afa72703727c107f7c4666682a7578a0 153 Pfam PF03477 ATP cone domain 50 136 3.3E-20 T 25-04-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CLFO_RS11670 afa72703727c107f7c4666682a7578a0 153 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.0E-66 T 25-04-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CLFO_RS11670 afa72703727c107f7c4666682a7578a0 153 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 85.847 T 25-04-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CLFO_RS06740 5d0f04dda8557e57d0c350e28f215ed0 354 Gene3D G3DSA:3.40.50.2300 143 310 8.6E-51 T 25-04-2017 CLFO_RS06740 5d0f04dda8557e57d0c350e28f215ed0 354 Pfam PF02608 Basic membrane protein 34 316 5.5E-67 T 25-04-2017 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 CLFO_RS06740 5d0f04dda8557e57d0c350e28f215ed0 354 SUPERFAMILY SSF53822 33 291 1.06E-8 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS16305 fd744f3076c322dc8265179f840f6aec 145 SUPERFAMILY SSF50800 4 145 2.98E-26 T 25-04-2017 IPR011037 Pyruvate kinase-like, insert domain CLFO_RS16305 fd744f3076c322dc8265179f840f6aec 145 Gene3D G3DSA:2.40.33.20 4 145 3.5E-19 T 25-04-2017 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like CLFO_RS20320 5abfe233b692f61f7229a65f6fb0f968 74 SUPERFAMILY SSF54285 2 74 2.06E-15 T 25-04-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLFO_RS20320 5abfe233b692f61f7229a65f6fb0f968 74 Pfam PF02597 ThiS family 5 74 9.9E-13 T 25-04-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CLFO_RS20320 5abfe233b692f61f7229a65f6fb0f968 74 Gene3D G3DSA:3.10.20.30 2 74 2.7E-18 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS00075 12073c6f42ce427581d516844bc08857 280 Pfam PF05681 Fumarate hydratase (Fumerase) 13 278 2.1E-105 T 25-04-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CLFO_RS00075 12073c6f42ce427581d516844bc08857 280 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 279 1.1E-96 T 25-04-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CLFO_RS15030 845a4263a881f63b85025da229b8cc02 230 SUPERFAMILY SSF48498 106 230 3.07E-18 T 25-04-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLFO_RS15030 845a4263a881f63b85025da229b8cc02 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 84 2.6E-14 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS15030 845a4263a881f63b85025da229b8cc02 230 Gene3D G3DSA:1.10.357.10 83 230 1.9E-21 T 25-04-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLFO_RS15030 845a4263a881f63b85025da229b8cc02 230 Gene3D G3DSA:1.10.10.60 34 82 7.7E-17 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS15030 845a4263a881f63b85025da229b8cc02 230 SUPERFAMILY SSF46689 32 106 6.16E-15 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS19695 42bafbbc392603de1c1447a265acc470 96 SUPERFAMILY SSF54189 2 92 3.13E-33 T 25-04-2017 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19695 42bafbbc392603de1c1447a265acc470 96 ProSitePatterns PS00050 Ribosomal protein L23 signature. 77 92 - T 25-04-2017 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19695 42bafbbc392603de1c1447a265acc470 96 Pfam PF00276 Ribosomal protein L23 6 88 4.6E-33 T 25-04-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19695 42bafbbc392603de1c1447a265acc470 96 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 22.524 T 25-04-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19695 42bafbbc392603de1c1447a265acc470 96 Gene3D G3DSA:3.30.70.330 2 95 1.1E-35 T 25-04-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 Gene3D G3DSA:1.10.10.60 58 119 3.0E-18 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 25-04-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 SUPERFAMILY SSF55136 173 295 2.3E-7 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.5E-5 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.5E-5 T 25-04-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 Pfam PF12833 Helix-turn-helix domain 27 106 2.5E-18 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 Gene3D G3DSA:3.20.80.10 204 297 8.9E-10 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 Gene3D G3DSA:1.10.10.60 2 57 4.3E-15 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 SUPERFAMILY SSF46689 57 114 9.41E-12 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 SMART SM00342 21 104 8.8E-23 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 SUPERFAMILY SSF46689 5 54 1.52E-6 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 Pfam PF14526 Integron-associated effector binding protein 156 295 6.0E-14 T 25-04-2017 IPR029441 Integron-associated effector binding protein CLFO_RS09430 014ffc4e27f840973236983c80dea62f 300 SMART SM00871 143 298 1.5E-5 T 25-04-2017 IPR010499 Bacterial transcription activator, effector binding CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 133 144 1.0E-22 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.0E-22 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.0E-22 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.0E-22 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 145 3.6E-42 T 25-04-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 5 307 35.036 T 25-04-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 78 87 1.9E-35 T 25-04-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 132 149 1.9E-35 T 25-04-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 225 234 1.9E-35 T 25-04-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.9E-35 T 25-04-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.9E-35 T 25-04-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.9E-35 T 25-04-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 SUPERFAMILY SSF53671 2 306 7.59E-98 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 Gene3D G3DSA:3.40.50.1370 145 291 7.9E-51 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 304 3.6E-27 T 25-04-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 6 305 1.6E-101 T 25-04-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CLFO_RS03085 0a6f2527e0c9e51305c47793fd1f0676 311 Gene3D G3DSA:3.40.50.1370 5 144 6.5E-53 T 25-04-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CLFO_RS15735 0fe982123cb13e27e403c0f9fce48988 526 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 279 525 9.0E-68 T 25-04-2017 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 CLFO_RS15735 0fe982123cb13e27e403c0f9fce48988 526 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 12 260 7.5E-69 T 25-04-2017 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 CLFO_RS15735 0fe982123cb13e27e403c0f9fce48988 526 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 253 5.0E-15 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15735 0fe982123cb13e27e403c0f9fce48988 526 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 354 522 7.0E-15 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15735 0fe982123cb13e27e403c0f9fce48988 526 SUPERFAMILY SSF161098 330 516 6.41E-29 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15735 0fe982123cb13e27e403c0f9fce48988 526 Gene3D G3DSA:1.10.3720.10 63 260 1.4E-24 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15735 0fe982123cb13e27e403c0f9fce48988 526 Gene3D G3DSA:1.10.3720.10 326 525 1.1E-24 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15735 0fe982123cb13e27e403c0f9fce48988 526 SUPERFAMILY SSF161098 67 250 3.79E-30 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04040 5078816a729aed4bff59595746b53475 77 SUPERFAMILY SSF52833 1 75 7.25E-19 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS04040 5078816a729aed4bff59595746b53475 77 Pfam PF13192 Thioredoxin domain 1 75 6.4E-27 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS04040 5078816a729aed4bff59595746b53475 77 Gene3D G3DSA:3.40.30.10 1 75 6.9E-30 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS04040 5078816a729aed4bff59595746b53475 77 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 76 1.1E-24 T 25-04-2017 IPR005243 Redox-active disulphide protein 2 CLFO_RS04040 5078816a729aed4bff59595746b53475 77 PIRSF PIRSF037031 1 77 3.9E-31 T 25-04-2017 IPR005243 Redox-active disulphide protein 2 CLFO_RS02925 0fd6c9a4ceb89e5a5dbe6dc7bbafb2f4 182 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 10 174 8.0E-35 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS02925 0fd6c9a4ceb89e5a5dbe6dc7bbafb2f4 182 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 1 177 8.9E-57 T 25-04-2017 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 CLFO_RS02925 0fd6c9a4ceb89e5a5dbe6dc7bbafb2f4 182 SUPERFAMILY SSF53323 1 177 2.35E-42 T 25-04-2017 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLFO_RS02925 0fd6c9a4ceb89e5a5dbe6dc7bbafb2f4 182 Gene3D G3DSA:3.40.920.10 1 177 8.0E-49 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS06765 ff8384d27abc253dfac7e64a8ec52fb5 247 Pfam PF07090 Putative glutamine amidotransferase 4 246 8.0E-109 T 25-04-2017 IPR010768 Putative glutamine amidotransferase CLFO_RS06765 ff8384d27abc253dfac7e64a8ec52fb5 247 PIRSF PIRSF034405 1 247 1.0E-101 T 25-04-2017 IPR017027 Uncharacterised conserved protein UCP034405 CLFO_RS06765 ff8384d27abc253dfac7e64a8ec52fb5 247 SUPERFAMILY SSF52317 4 246 6.64E-70 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS06765 ff8384d27abc253dfac7e64a8ec52fb5 247 Gene3D G3DSA:3.40.50.880 2 246 6.6E-91 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS00785 15be652b052f788e57c3f38e3fd63639 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 5.3E-17 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS00785 15be652b052f788e57c3f38e3fd63639 196 Pfam PF08360 QacR-like protein, C-terminal region 75 155 2.2E-5 T 25-04-2017 IPR013571 Transcription regulator QacR, C-terminal GO:0003700|GO:0045892 CLFO_RS00785 15be652b052f788e57c3f38e3fd63639 196 Gene3D G3DSA:1.10.10.60 8 53 1.8E-17 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS00785 15be652b052f788e57c3f38e3fd63639 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.7E-11 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS00785 15be652b052f788e57c3f38e3fd63639 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.7E-11 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS00785 15be652b052f788e57c3f38e3fd63639 196 SUPERFAMILY SSF48498 79 167 9.64E-12 T 25-04-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLFO_RS00785 15be652b052f788e57c3f38e3fd63639 196 SUPERFAMILY SSF46689 9 83 2.24E-16 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS00785 15be652b052f788e57c3f38e3fd63639 196 Gene3D G3DSA:1.10.357.10 54 192 2.0E-14 T 25-04-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLFO_RS21175 88014bf8f34000e09c95e478a1a6a03a 515 Gene3D G3DSA:3.40.50.300 136 270 4.2E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21175 88014bf8f34000e09c95e478a1a6a03a 515 Pfam PF13401 AAA domain 138 282 1.9E-17 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS21175 88014bf8f34000e09c95e478a1a6a03a 515 SUPERFAMILY SSF52540 134 381 6.52E-15 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS08475 ca8f1d5359a5dd7aa80c12a2b16c2d5d 929 Pfam PF03717 Penicillin-binding Protein dimerisation domain 53 357 5.0E-55 T 25-04-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLFO_RS08475 ca8f1d5359a5dd7aa80c12a2b16c2d5d 929 Pfam PF00905 Penicillin binding protein transpeptidase domain 419 798 6.0E-49 T 25-04-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLFO_RS08475 ca8f1d5359a5dd7aa80c12a2b16c2d5d 929 Gene3D G3DSA:3.90.1310.10 249 370 3.1E-35 T 25-04-2017 CLFO_RS08475 ca8f1d5359a5dd7aa80c12a2b16c2d5d 929 Gene3D G3DSA:3.40.710.10 860 911 1.5E-106 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS08475 ca8f1d5359a5dd7aa80c12a2b16c2d5d 929 Gene3D G3DSA:3.40.710.10 371 599 1.5E-106 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS08475 ca8f1d5359a5dd7aa80c12a2b16c2d5d 929 Gene3D G3DSA:3.40.710.10 685 799 1.5E-106 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS08475 ca8f1d5359a5dd7aa80c12a2b16c2d5d 929 SUPERFAMILY SSF56601 688 798 1.52E-70 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS08475 ca8f1d5359a5dd7aa80c12a2b16c2d5d 929 SUPERFAMILY SSF56601 372 386 1.52E-70 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS08475 ca8f1d5359a5dd7aa80c12a2b16c2d5d 929 SUPERFAMILY SSF56601 417 604 1.52E-70 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS08475 ca8f1d5359a5dd7aa80c12a2b16c2d5d 929 SUPERFAMILY SSF56601 867 913 1.52E-70 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS08475 ca8f1d5359a5dd7aa80c12a2b16c2d5d 929 SUPERFAMILY SSF56519 46 110 2.35E-41 T 25-04-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLFO_RS08475 ca8f1d5359a5dd7aa80c12a2b16c2d5d 929 SUPERFAMILY SSF56519 241 371 2.35E-41 T 25-04-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLFO_RS10040 bc388028e0f6f9f20cf3a1b61c5be187 486 SUPERFAMILY SSF53720 15 451 3.01E-84 T 25-04-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CLFO_RS10040 bc388028e0f6f9f20cf3a1b61c5be187 486 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 5 484 1.7E-241 T 25-04-2017 IPR013357 Acetaldehyde dehydrogenase, acetylating CLFO_RS10040 bc388028e0f6f9f20cf3a1b61c5be187 486 Gene3D G3DSA:3.40.309.10 231 278 3.9E-22 T 25-04-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLFO_RS10040 bc388028e0f6f9f20cf3a1b61c5be187 486 Gene3D G3DSA:3.40.309.10 315 406 3.9E-22 T 25-04-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLFO_RS10040 bc388028e0f6f9f20cf3a1b61c5be187 486 Pfam PF00171 Aldehyde dehydrogenase family 16 328 6.2E-29 T 25-04-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CLFO_RS10040 bc388028e0f6f9f20cf3a1b61c5be187 486 Gene3D G3DSA:3.40.605.10 15 230 1.7E-25 T 25-04-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CLFO_RS17215 b3b00c9da3b1f69a0f0eb9c366dfcdfb 69 Pfam PF01381 Helix-turn-helix 5 59 9.2E-7 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS17215 b3b00c9da3b1f69a0f0eb9c366dfcdfb 69 SUPERFAMILY SSF47413 3 63 4.79E-10 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS17215 b3b00c9da3b1f69a0f0eb9c366dfcdfb 69 Gene3D G3DSA:1.10.260.40 2 63 1.1E-12 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS17215 b3b00c9da3b1f69a0f0eb9c366dfcdfb 69 SMART SM00530 4 59 4.1E-5 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS04490 5e508e2d181edfc2c24df415c46e171b 323 Gene3D G3DSA:3.40.190.10 105 234 9.3E-7 T 25-04-2017 CLFO_RS04490 5e508e2d181edfc2c24df415c46e171b 323 Pfam PF09084 NMT1/THI5 like 33 243 3.1E-19 T 25-04-2017 IPR015168 SsuA/THI5-like CLFO_RS04490 5e508e2d181edfc2c24df415c46e171b 323 SUPERFAMILY SSF53850 26 246 6.53E-32 T 25-04-2017 CLFO_RS07165 aed6b5436628536b036302ac7c865bae 230 SUPERFAMILY SSF51412 72 208 4.58E-14 T 25-04-2017 CLFO_RS07165 aed6b5436628536b036302ac7c865bae 230 Gene3D G3DSA:3.20.20.70 99 208 2.6E-11 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS16925 f96c1286e5aec29af7d4e235341ecdb3 374 Pfam PF01385 Probable transposase 178 280 8.3E-9 T 25-04-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 CLFO_RS16925 f96c1286e5aec29af7d4e235341ecdb3 374 Pfam PF07282 Putative transposase DNA-binding domain 299 363 2.1E-19 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS16925 f96c1286e5aec29af7d4e235341ecdb3 374 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 246 326 5.1E-19 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS03155 ff33bcad047e4921ffbe0557ecc5ea2e 130 SUPERFAMILY SSF46785 6 84 8.02E-19 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03155 ff33bcad047e4921ffbe0557ecc5ea2e 130 SMART SM00345 13 76 8.7E-11 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS03155 ff33bcad047e4921ffbe0557ecc5ea2e 130 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 6.3E-15 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS03155 ff33bcad047e4921ffbe0557ecc5ea2e 130 Gene3D G3DSA:1.10.10.10 4 77 9.4E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS11200 fa43491479115c78b842691e67519f0c 281 Pfam PF01926 50S ribosome-binding GTPase 122 195 1.1E-16 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS11200 fa43491479115c78b842691e67519f0c 281 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 169 184 2.5E-5 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS11200 fa43491479115c78b842691e67519f0c 281 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 123 143 2.5E-5 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS11200 fa43491479115c78b842691e67519f0c 281 SUPERFAMILY SSF52540 9 247 1.59E-44 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11200 fa43491479115c78b842691e67519f0c 281 Gene3D G3DSA:1.10.1580.10 180 272 1.7E-29 T 25-04-2017 IPR023179 GTP-binding protein, orthogonal bundle domain CLFO_RS11200 fa43491479115c78b842691e67519f0c 281 PIRSF PIRSF006230 1 281 4.6E-102 T 25-04-2017 IPR016478 GTPase, MTG1 CLFO_RS11200 fa43491479115c78b842691e67519f0c 281 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 278 7.3E-111 T 25-04-2017 IPR019991 GTP-binding protein, ribosome biogenesis CLFO_RS11200 fa43491479115c78b842691e67519f0c 281 Gene3D G3DSA:3.40.50.300 19 177 3.9E-38 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02145 cdaa2bdb0cffa3bacc1512cf2095f445 477 PIRSF PIRSF012293 1 477 2.2E-197 T 25-04-2017 IPR009377 Ethanolamine utilisation EutA CLFO_RS02145 cdaa2bdb0cffa3bacc1512cf2095f445 477 SUPERFAMILY SSF53067 8 267 1.74E-10 T 25-04-2017 CLFO_RS02145 cdaa2bdb0cffa3bacc1512cf2095f445 477 Pfam PF06277 Ethanolamine utilisation protein EutA 3 476 3.7E-210 T 25-04-2017 IPR009377 Ethanolamine utilisation EutA CLFO_RS02145 cdaa2bdb0cffa3bacc1512cf2095f445 477 Gene3D G3DSA:3.30.420.40 146 177 5.6E-9 T 25-04-2017 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 Gene3D G3DSA:3.40.50.10490 200 417 3.5E-90 T 25-04-2017 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 25-04-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 25.46 T 25-04-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 5.0E-26 T 25-04-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 5.0E-26 T 25-04-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 5.0E-26 T 25-04-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 5.0E-26 T 25-04-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 5.0E-26 T 25-04-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 5.0E-26 T 25-04-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 SUPERFAMILY SSF53697 4 442 9.54E-136 T 25-04-2017 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 Gene3D G3DSA:3.40.50.10490 70 199 1.5E-28 T 25-04-2017 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 408 425 - T 25-04-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS04395 d4bb2b349b4ba325d2b67be4f20a088e 450 Pfam PF00342 Phosphoglucose isomerase 76 426 3.3E-21 T 25-04-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS01885 43e30987149d436359fdf8f841f7c8de 271 Gene3D G3DSA:3.40.50.300 3 62 2.1E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01885 43e30987149d436359fdf8f841f7c8de 271 Gene3D G3DSA:3.40.50.300 162 252 2.1E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01885 43e30987149d436359fdf8f841f7c8de 271 Pfam PF03780 Asp23 family, cell envelope-related function 183 267 5.9E-9 T 25-04-2017 IPR005531 Alkaline shock protein Asp23 CLFO_RS01885 43e30987149d436359fdf8f841f7c8de 271 SUPERFAMILY SSF52540 2 138 2.5E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS00810 a53e2efa974ab4c81e98465b8b75e071 166 Pfam PF06695 Putative small multi-drug export protein 27 146 1.8E-42 T 25-04-2017 IPR009577 Putative small multi-drug export CLFO_RS05455 0ea5d60895f702cacc045e3bb3681c3b 555 Gene3D G3DSA:3.40.50.970 345 545 2.3E-78 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS05455 0ea5d60895f702cacc045e3bb3681c3b 555 SUPERFAMILY SSF52518 2 177 3.4E-64 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS05455 0ea5d60895f702cacc045e3bb3681c3b 555 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 553 3.4E-240 T 25-04-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CLFO_RS05455 0ea5d60895f702cacc045e3bb3681c3b 555 SUPERFAMILY SSF52518 359 551 6.68E-69 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS05455 0ea5d60895f702cacc045e3bb3681c3b 555 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 327 3.2E-44 T 25-04-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CLFO_RS05455 0ea5d60895f702cacc045e3bb3681c3b 555 SUPERFAMILY SSF52467 188 352 1.36E-59 T 25-04-2017 IPR029035 DHS-like NAD/FAD-binding domain CLFO_RS05455 0ea5d60895f702cacc045e3bb3681c3b 555 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 530 4.5E-49 T 25-04-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLFO_RS05455 0ea5d60895f702cacc045e3bb3681c3b 555 Gene3D G3DSA:3.40.50.970 2 177 1.7E-75 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS05455 0ea5d60895f702cacc045e3bb3681c3b 555 Gene3D G3DSA:3.40.50.1220 188 344 1.8E-64 T 25-04-2017 IPR029035 DHS-like NAD/FAD-binding domain CLFO_RS05455 0ea5d60895f702cacc045e3bb3681c3b 555 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 169 9.2E-59 T 25-04-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CLFO_RS05455 0ea5d60895f702cacc045e3bb3681c3b 555 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 419 438 - T 25-04-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CLFO_RS18415 8a165a3feeafe8232347a75e04b9f901 162 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 2 159 6.3E-40 T 25-04-2017 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CLFO_RS18415 8a165a3feeafe8232347a75e04b9f901 162 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 2 159 1.4E-42 T 25-04-2017 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 SUPERFAMILY SSF54862 561 675 5.02E-26 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 SUPERFAMILY SSF51971 192 436 1.06E-67 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 SUPERFAMILY SSF53706 687 1126 1.83E-89 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 8.0E-20 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 SMART SM00926 687 741 5.2E-14 T 25-04-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Gene3D G3DSA:3.40.50.740 973 1123 5.3E-59 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Gene3D G3DSA:3.40.50.740 744 816 5.3E-59 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Pfam PF00037 4Fe-4S binding domain 658 673 6.0E-6 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Gene3D G3DSA:3.50.50.60 284 435 7.5E-48 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 688 738 1.4E-11 T 25-04-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 658 669 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Gene3D G3DSA:1.10.1060.10 100 196 3.0E-27 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Gene3D G3DSA:1.10.1060.10 520 571 3.0E-20 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Gene3D G3DSA:1.10.1060.10 620 681 3.0E-20 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Gene3D G3DSA:3.40.228.10 822 972 5.2E-16 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 100 178 1.5E-19 T 25-04-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 PRINTS PR00419 Adrenodoxin reductase family signature 195 217 1.4E-17 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 PRINTS PR00419 Adrenodoxin reductase family signature 360 373 1.4E-17 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 PRINTS PR00419 Adrenodoxin reductase family signature 218 231 1.4E-17 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 PRINTS PR00419 Adrenodoxin reductase family signature 326 340 1.4E-17 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Gene3D G3DSA:2.20.25.90 686 740 4.6E-15 T 25-04-2017 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 SUPERFAMILY SSF46548 99 203 4.03E-19 T 25-04-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Gene3D G3DSA:3.40.50.720 436 508 5.5E-35 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Gene3D G3DSA:3.40.50.720 197 283 5.5E-35 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Gene3D G3DSA:3.10.20.30 2 56 8.1E-8 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 194 489 9.1E-35 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 SUPERFAMILY SSF54292 5 101 1.21E-28 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS04245 783f4963b970edf41717d97da3fff79d 1193 Pfam PF00384 Molybdopterin oxidoreductase 744 1099 2.3E-34 T 25-04-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS20030 09176c9be9e341809142acef1c1aa72f 244 Pfam PF13519 von Willebrand factor type A domain 136 228 3.5E-9 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS20030 09176c9be9e341809142acef1c1aa72f 244 SUPERFAMILY SSF53300 135 226 3.56E-12 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS20030 09176c9be9e341809142acef1c1aa72f 244 Gene3D G3DSA:3.40.50.410 6 82 3.6E-5 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS20030 09176c9be9e341809142acef1c1aa72f 244 Gene3D G3DSA:3.40.50.410 135 225 3.9E-8 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS20030 09176c9be9e341809142acef1c1aa72f 244 Pfam PF00092 von Willebrand factor type A domain 5 84 4.6E-7 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS20030 09176c9be9e341809142acef1c1aa72f 244 SUPERFAMILY SSF53300 7 87 9.35E-9 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS05660 309fada7fc1f15b25c44d5802d455bf3 572 SUPERFAMILY SSF53920 42 347 4.58E-50 T 25-04-2017 IPR009016 Iron hydrogenase CLFO_RS05660 309fada7fc1f15b25c44d5802d455bf3 572 SMART SM00091 411 477 0.0013 T 25-04-2017 IPR000014 PAS domain CLFO_RS05660 309fada7fc1f15b25c44d5802d455bf3 572 Pfam PF04060 Putative Fe-S cluster 374 403 2.8E-7 T 25-04-2017 IPR007202 4Fe-4S domain GO:0051536 CLFO_RS05660 309fada7fc1f15b25c44d5802d455bf3 572 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 86 300 4.2E-41 T 25-04-2017 IPR004108 Iron hydrogenase, large subunit, C-terminal CLFO_RS05660 309fada7fc1f15b25c44d5802d455bf3 572 Pfam PF12838 4Fe-4S dicluster domain 13 56 2.0E-6 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS05660 309fada7fc1f15b25c44d5802d455bf3 572 Gene3D G3DSA:3.30.70.20 3 46 1.5E-12 T 25-04-2017 CLFO_RS05660 309fada7fc1f15b25c44d5802d455bf3 572 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 43 54 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS05660 309fada7fc1f15b25c44d5802d455bf3 572 SUPERFAMILY SSF54862 11 67 7.61E-16 T 25-04-2017 CLFO_RS05660 309fada7fc1f15b25c44d5802d455bf3 572 Gene3D G3DSA:3.30.450.20 416 531 6.5E-5 T 25-04-2017 CLFO_RS05660 309fada7fc1f15b25c44d5802d455bf3 572 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 14 25 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS05660 309fada7fc1f15b25c44d5802d455bf3 572 Gene3D G3DSA:3.40.50.1780 139 247 3.2E-27 T 25-04-2017 CLFO_RS05660 309fada7fc1f15b25c44d5802d455bf3 572 Gene3D G3DSA:3.40.50.1780 47 100 3.2E-27 T 25-04-2017 CLFO_RS13860 51ae374b739bc0fc4d824faaad6d2fbc 63 Pfam PF02416 mttA/Hcf106 family 5 55 9.8E-20 T 25-04-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CLFO_RS13860 51ae374b739bc0fc4d824faaad6d2fbc 63 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 5.5E-7 T 25-04-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CLFO_RS13860 51ae374b739bc0fc4d824faaad6d2fbc 63 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 41 59 5.5E-7 T 25-04-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CLFO_RS13860 51ae374b739bc0fc4d824faaad6d2fbc 63 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 5.5E-7 T 25-04-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CLFO_RS13860 51ae374b739bc0fc4d824faaad6d2fbc 63 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 49 9.9E-19 T 25-04-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CLFO_RS13860 51ae374b739bc0fc4d824faaad6d2fbc 63 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 62 17.587 T 25-04-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CLFO_RS02570 2c0013f7477a1927d63b3314bb01e18b 327 Gene3D G3DSA:3.40.50.920 197 320 2.0E-49 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS02570 2c0013f7477a1927d63b3314bb01e18b 327 Pfam PF02779 Transketolase, pyrimidine binding domain 3 179 4.6E-49 T 25-04-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CLFO_RS02570 2c0013f7477a1927d63b3314bb01e18b 327 SUPERFAMILY SSF52518 3 188 8.03E-69 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS02570 2c0013f7477a1927d63b3314bb01e18b 327 SMART SM00861 4 179 1.5E-65 T 25-04-2017 IPR005475 Transketolase-like, pyrimidine-binding domain CLFO_RS02570 2c0013f7477a1927d63b3314bb01e18b 327 SUPERFAMILY SSF52922 189 323 1.57E-43 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS02570 2c0013f7477a1927d63b3314bb01e18b 327 Pfam PF02780 Transketolase, C-terminal domain 193 315 2.4E-43 T 25-04-2017 IPR033248 Transketolase, C-terminal domain CLFO_RS02570 2c0013f7477a1927d63b3314bb01e18b 327 Gene3D G3DSA:3.40.50.970 1 195 4.6E-82 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS17620 3ecf0e75b78772b5872b7ab09debf0f9 165 Gene3D G3DSA:1.20.1260.10 1 153 6.0E-32 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS17620 3ecf0e75b78772b5872b7ab09debf0f9 165 SUPERFAMILY SSF47240 3 156 2.18E-26 T 25-04-2017 IPR009078 Ferritin-like superfamily CLFO_RS17620 3ecf0e75b78772b5872b7ab09debf0f9 165 Pfam PF02915 Rubrerythrin 7 151 1.4E-12 T 25-04-2017 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLFO_RS05390 ce9399a3054b51aca1e5ac4b5ba030b6 66 SMART SM00357 3 66 2.8E-32 T 25-04-2017 IPR011129 Cold shock protein GO:0003676 CLFO_RS05390 ce9399a3054b51aca1e5ac4b5ba030b6 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 8.0E-33 T 25-04-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLFO_RS05390 ce9399a3054b51aca1e5ac4b5ba030b6 66 PIRSF PIRSF002599 1 66 1.2E-25 T 25-04-2017 IPR012156 Cold shock, CspA GO:0003676 CLFO_RS05390 ce9399a3054b51aca1e5ac4b5ba030b6 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 25-04-2017 IPR019844 Cold-shock conserved site CLFO_RS05390 ce9399a3054b51aca1e5ac4b5ba030b6 66 SUPERFAMILY SSF50249 1 64 1.94E-26 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS05390 ce9399a3054b51aca1e5ac4b5ba030b6 66 PRINTS PR00050 Cold shock protein signature 24 33 2.0E-20 T 25-04-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLFO_RS05390 ce9399a3054b51aca1e5ac4b5ba030b6 66 PRINTS PR00050 Cold shock protein signature 39 57 2.0E-20 T 25-04-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLFO_RS05390 ce9399a3054b51aca1e5ac4b5ba030b6 66 PRINTS PR00050 Cold shock protein signature 4 19 2.0E-20 T 25-04-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLFO_RS05390 ce9399a3054b51aca1e5ac4b5ba030b6 66 Gene3D G3DSA:2.40.50.140 1 64 8.5E-34 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS14200 7238fe533564ebc6eccb958bb7b5dc65 235 Gene3D G3DSA:3.50.40.10 78 198 3.0E-16 T 25-04-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 CLFO_RS14200 7238fe533564ebc6eccb958bb7b5dc65 235 SUPERFAMILY SSF56037 50 229 6.28E-37 T 25-04-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 CLFO_RS14200 7238fe533564ebc6eccb958bb7b5dc65 235 Pfam PF03483 B3/4 domain 69 198 1.1E-23 T 25-04-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CLFO_RS14200 7238fe533564ebc6eccb958bb7b5dc65 235 SMART SM00873 64 217 3.0E-15 T 25-04-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CLFO_RS13805 2242ca32e6381072535cb7b4a3a42acb 281 SUPERFAMILY SSF54675 2 105 2.12E-23 T 25-04-2017 CLFO_RS13805 2242ca32e6381072535cb7b4a3a42acb 281 Gene3D G3DSA:3.90.1170.20 6 128 6.7E-30 T 25-04-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CLFO_RS13805 2242ca32e6381072535cb7b4a3a42acb 281 Gene3D G3DSA:3.20.20.70 129 267 6.9E-34 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS13805 2242ca32e6381072535cb7b4a3a42acb 281 PIRSF PIRSF006250 1 281 1.4E-62 T 25-04-2017 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CLFO_RS13805 2242ca32e6381072535cb7b4a3a42acb 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 104 2.4E-18 T 25-04-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CLFO_RS13805 2242ca32e6381072535cb7b4a3a42acb 281 TIGRFAM TIGR01334 modD: modD protein 2 278 3.8E-76 T 25-04-2017 IPR006242 Putative pyrophosphorylase ModD GO:0016763 CLFO_RS13805 2242ca32e6381072535cb7b4a3a42acb 281 SUPERFAMILY SSF51690 106 277 2.79E-39 T 25-04-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CLFO_RS13805 2242ca32e6381072535cb7b4a3a42acb 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 106 274 2.1E-31 T 25-04-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CLFO_RS14180 654a9f2678de729bdc91483766e2a02e 598 Gene3D G3DSA:3.40.50.410 454 588 2.0E-7 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS14180 654a9f2678de729bdc91483766e2a02e 598 SUPERFAMILY SSF53300 542 594 8.9E-9 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS14180 654a9f2678de729bdc91483766e2a02e 598 SUPERFAMILY SSF53300 408 513 8.9E-9 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS14180 654a9f2678de729bdc91483766e2a02e 598 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 471 513 1.5E-4 T 25-04-2017 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 CLFO_RS21440 ab4c1e9e0ad641e2d7576a6afc2a61a1 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 25-04-2017 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS21440 ab4c1e9e0ad641e2d7576a6afc2a61a1 44 Pfam PF00468 Ribosomal protein L34 2 44 4.4E-22 T 25-04-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS21440 ab4c1e9e0ad641e2d7576a6afc2a61a1 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 30 5.0E-8 T 25-04-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS21440 ab4c1e9e0ad641e2d7576a6afc2a61a1 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 3.2E-21 T 25-04-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS21440 ab4c1e9e0ad641e2d7576a6afc2a61a1 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.439 T 25-04-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS17775 0bdef2b6d5316c081808a6d12ec8958e 226 Pfam PF01987 Mitochondrial biogenesis AIM24 3 209 8.3E-66 T 25-04-2017 IPR002838 Mitochondrial biogenesis protein AIM24 CLFO_RS17775 0bdef2b6d5316c081808a6d12ec8958e 226 Gene3D G3DSA:3.60.160.10 1 225 5.5E-78 T 25-04-2017 IPR002838 Mitochondrial biogenesis protein AIM24 CLFO_RS17775 0bdef2b6d5316c081808a6d12ec8958e 226 SUPERFAMILY SSF51219 1 225 3.4E-71 T 25-04-2017 IPR016031 Tryptophan RNA-binding attenuator protein-like domain CLFO_RS17775 0bdef2b6d5316c081808a6d12ec8958e 226 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 1 224 5.9E-53 T 25-04-2017 IPR002838 Mitochondrial biogenesis protein AIM24 CLFO_RS20085 c8dbe80c30dd242f4d3bab0744ab9e43 364 Pfam PF01966 HD domain 136 258 2.6E-12 T 25-04-2017 IPR006674 HD domain CLFO_RS20085 c8dbe80c30dd242f4d3bab0744ab9e43 364 SMART SM00471 132 268 2.3E-8 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS20085 c8dbe80c30dd242f4d3bab0744ab9e43 364 Gene3D G3DSA:1.10.3210.10 133 293 5.6E-16 T 25-04-2017 IPR006674 HD domain CLFO_RS20085 c8dbe80c30dd242f4d3bab0744ab9e43 364 SUPERFAMILY SSF109604 131 295 4.08E-34 T 25-04-2017 CLFO_RS01425 6a7dd0bd50750c0fa5b8043d67538842 233 Gene3D G3DSA:3.40.50.720 6 232 9.5E-68 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01425 6a7dd0bd50750c0fa5b8043d67538842 233 SUPERFAMILY SSF51735 6 232 3.33E-59 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01425 6a7dd0bd50750c0fa5b8043d67538842 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 8.0E-12 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01425 6a7dd0bd50750c0fa5b8043d67538842 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 8.0E-12 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01425 6a7dd0bd50750c0fa5b8043d67538842 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 8.0E-12 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01425 6a7dd0bd50750c0fa5b8043d67538842 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 218 1.1E-28 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01425 6a7dd0bd50750c0fa5b8043d67538842 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 1.1E-28 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01425 6a7dd0bd50750c0fa5b8043d67538842 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 1.1E-28 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01425 6a7dd0bd50750c0fa5b8043d67538842 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 1.1E-28 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01425 6a7dd0bd50750c0fa5b8043d67538842 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.1E-28 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01425 6a7dd0bd50750c0fa5b8043d67538842 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 1.1E-28 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01425 6a7dd0bd50750c0fa5b8043d67538842 233 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 230 6.2E-45 T 25-04-2017 CLFO_RS11330 ec7fcfbc2557f2c550cdc8ae28f95977 157 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 156 1.1E-62 T 25-04-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CLFO_RS11330 ec7fcfbc2557f2c550cdc8ae28f95977 157 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 103 8.0E-5 T 25-04-2017 CLFO_RS11330 ec7fcfbc2557f2c550cdc8ae28f95977 157 Gene3D G3DSA:3.40.50.620 1 156 1.4E-57 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS11330 ec7fcfbc2557f2c550cdc8ae28f95977 157 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 59 1.2E-18 T 25-04-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLFO_RS11330 ec7fcfbc2557f2c550cdc8ae28f95977 157 Pfam PF01467 Cytidylyltransferase-like 5 133 2.4E-22 T 25-04-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CLFO_RS11330 ec7fcfbc2557f2c550cdc8ae28f95977 157 SUPERFAMILY SSF52374 1 155 1.2E-47 T 25-04-2017 CLFO_RS11330 ec7fcfbc2557f2c550cdc8ae28f95977 157 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 157 34.352 T 25-04-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CLFO_RS11330 ec7fcfbc2557f2c550cdc8ae28f95977 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.7E-49 T 25-04-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CLFO_RS11330 ec7fcfbc2557f2c550cdc8ae28f95977 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.7E-49 T 25-04-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CLFO_RS11330 ec7fcfbc2557f2c550cdc8ae28f95977 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.7E-49 T 25-04-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CLFO_RS11330 ec7fcfbc2557f2c550cdc8ae28f95977 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.7E-49 T 25-04-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CLFO_RS11330 ec7fcfbc2557f2c550cdc8ae28f95977 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.7E-49 T 25-04-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 CLFO_RS13475 d62ac9563a0a8939618e26cd68150e36 627 Gene3D G3DSA:3.40.50.2030 228 399 2.1E-57 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS13475 d62ac9563a0a8939618e26cd68150e36 627 SUPERFAMILY SSF56821 15 621 4.43E-157 T 25-04-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CLFO_RS13475 d62ac9563a0a8939618e26cd68150e36 627 Gene3D G3DSA:3.40.50.2030 403 622 2.8E-79 T 25-04-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS13475 d62ac9563a0a8939618e26cd68150e36 627 Pfam PF03063 Prismane/CO dehydrogenase family 41 601 4.1E-143 T 25-04-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CLFO_RS13475 d62ac9563a0a8939618e26cd68150e36 627 Gene3D G3DSA:1.20.1270.30 56 226 5.2E-59 T 25-04-2017 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS13475 d62ac9563a0a8939618e26cd68150e36 627 PIRSF PIRSF005023 1 622 4.2E-234 T 25-04-2017 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS13475 d62ac9563a0a8939618e26cd68150e36 627 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 7 621 1.5E-253 T 25-04-2017 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 MetaCyc: PWY-5372|MetaCyc: PWY-6780 CLFO_RS01040 0e07181b84907a98b90b7cada501f380 143 Gene3D G3DSA:2.60.320.10 41 130 2.5E-5 T 25-04-2017 IPR024045 NusG, domain 2 CLFO_RS01040 0e07181b84907a98b90b7cada501f380 143 Pfam PF07009 NusG domain II 17 131 1.3E-19 T 25-04-2017 IPR024045 NusG, domain 2 CLFO_RS18865 342b6874c8700b6329ac85a80668a485 354 SUPERFAMILY SSF52922 240 352 4.19E-27 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS18865 342b6874c8700b6329ac85a80668a485 354 SUPERFAMILY SSF52518 1 238 1.47E-60 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS18865 342b6874c8700b6329ac85a80668a485 354 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 240 2.9E-50 T 25-04-2017 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CLFO_RS18865 342b6874c8700b6329ac85a80668a485 354 Gene3D G3DSA:3.40.50.920 240 350 3.7E-28 T 25-04-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CLFO_RS18865 342b6874c8700b6329ac85a80668a485 354 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 248 342 3.4E-25 T 25-04-2017 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CLFO_RS18865 342b6874c8700b6329ac85a80668a485 354 Gene3D G3DSA:3.40.50.970 1 189 4.0E-69 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS01055 e764607750ddef8bbb735df5f85337a9 421 Gene3D G3DSA:3.65.10.10 221 416 5.9E-66 T 25-04-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CLFO_RS01055 e764607750ddef8bbb735df5f85337a9 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 47.168 T 25-04-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS01055 e764607750ddef8bbb735df5f85337a9 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3 414 5.4E-182 T 25-04-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS01055 e764607750ddef8bbb735df5f85337a9 421 SUPERFAMILY SSF55205 3 418 9.68E-143 T 25-04-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CLFO_RS01055 e764607750ddef8bbb735df5f85337a9 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 405 3.7E-113 T 25-04-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CLFO_RS01055 e764607750ddef8bbb735df5f85337a9 421 Gene3D G3DSA:3.65.10.10 21 220 1.0E-67 T 25-04-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 4.6E-65 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 297 323 4.6E-65 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 4.6E-65 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 66 89 4.6E-65 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 46 64 4.6E-65 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 Gene3D G3DSA:3.90.640.10 184 256 1.1E-34 T 25-04-2017 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 Gene3D G3DSA:3.30.420.40 8 156 5.3E-51 T 25-04-2017 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 SUPERFAMILY SSF53067 146 329 6.48E-52 T 25-04-2017 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 Gene3D G3DSA:3.30.420.40 157 183 4.1E-36 T 25-04-2017 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 Gene3D G3DSA:3.30.420.40 260 314 4.1E-36 T 25-04-2017 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 332 2.5E-162 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 Pfam PF06723 MreB/Mbl protein 9 331 2.0E-158 T 25-04-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CLFO_RS08460 5cbbc362bb0a9fce8ea77fa12eb4baf5 340 SUPERFAMILY SSF53067 7 145 4.39E-44 T 25-04-2017 CLFO_RS20135 4b8e37f3e290ee51839542914e2bc1ad 230 SUPERFAMILY SSF48008 83 218 3.66E-29 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS20135 4b8e37f3e290ee51839542914e2bc1ad 230 SUPERFAMILY SSF46785 11 106 2.18E-22 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20135 4b8e37f3e290ee51839542914e2bc1ad 230 Gene3D G3DSA:1.10.10.10 6 78 8.3E-28 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20135 4b8e37f3e290ee51839542914e2bc1ad 230 Pfam PF07729 FCD domain 87 210 9.2E-27 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS20135 4b8e37f3e290ee51839542914e2bc1ad 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 77 2.5E-20 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20135 4b8e37f3e290ee51839542914e2bc1ad 230 Gene3D G3DSA:1.20.120.530 81 219 6.2E-32 T 25-04-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal CLFO_RS20135 4b8e37f3e290ee51839542914e2bc1ad 230 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 48 8.4E-6 T 25-04-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLFO_RS20135 4b8e37f3e290ee51839542914e2bc1ad 230 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 48 67 8.4E-6 T 25-04-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLFO_RS20135 4b8e37f3e290ee51839542914e2bc1ad 230 SMART SM00895 87 211 4.4E-21 T 25-04-2017 IPR011711 GntR, C-terminal CLFO_RS20135 4b8e37f3e290ee51839542914e2bc1ad 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 3.0E-7 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20135 4b8e37f3e290ee51839542914e2bc1ad 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 3.0E-7 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS20135 4b8e37f3e290ee51839542914e2bc1ad 230 SMART SM00345 19 77 2.5E-20 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS05755 f4e6376604f2edaa9910b7f302bd57ae 332 Pfam PF01867 CRISPR associated protein Cas1 6 285 3.5E-88 T 25-04-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CLFO_RS05755 f4e6376604f2edaa9910b7f302bd57ae 332 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 6 325 1.0E-85 T 25-04-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CLFO_RS05755 f4e6376604f2edaa9910b7f302bd57ae 332 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 315 22.992 T 25-04-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CLFO_RS05755 f4e6376604f2edaa9910b7f302bd57ae 332 TIGRFAM TIGR03641 cas1_HMARI: CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP 4 328 4.1E-131 T 25-04-2017 IPR019858 CRISPR-associated protein Cas1, HMARI/TNEAP subtype GO:0004520|GO:0043571|GO:0046872 CLFO_RS20630 b0c71264235d223c2cfe1d422765ed28 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 325 3.1E-79 T 25-04-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CLFO_RS20630 b0c71264235d223c2cfe1d422765ed28 350 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 41 298 6.7E-59 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS20630 b0c71264235d223c2cfe1d422765ed28 350 PIRSF PIRSF006470 4 343 6.7E-73 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS12020 ca83c738edddc82fd233bc2a98255c52 315 SUPERFAMILY SSF46785 6 64 2.72E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12020 ca83c738edddc82fd233bc2a98255c52 315 Pfam PF13280 WYL domain 140 311 9.5E-38 T 25-04-2017 IPR026881 WYL domain CLFO_RS12020 ca83c738edddc82fd233bc2a98255c52 315 Pfam PF08279 HTH domain 11 60 3.3E-7 T 25-04-2017 IPR013196 Helix-turn-helix, type 11 CLFO_RS12020 ca83c738edddc82fd233bc2a98255c52 315 Gene3D G3DSA:1.10.10.10 3 64 7.4E-7 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS17840 24940e362cfd79555bd0cee3bb2901eb 159 Pfam PF14343 PrcB C-terminal 82 142 6.3E-16 T 25-04-2017 IPR025748 PrcB C-terminal domain CLFO_RS12675 9901e326281606b55938783af7fd85eb 119 Pfam PF07875 Coat F domain 35 94 2.5E-10 T 25-04-2017 IPR012851 Spore coat protein CotF-like CLFO_RS15360 be84c858e7001d1fc75b440464848500 275 SUPERFAMILY SSF56281 12 251 8.39E-47 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS15360 be84c858e7001d1fc75b440464848500 275 Pfam PF00753 Metallo-beta-lactamase superfamily 31 242 5.4E-34 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS15360 be84c858e7001d1fc75b440464848500 275 Gene3D G3DSA:3.60.15.10 9 250 1.4E-38 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS15360 be84c858e7001d1fc75b440464848500 275 SMART SM00849 30 242 3.5E-32 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS08030 f6c7c8142ebfe66aea7999b1693d1741 104 Pfam PF05717 IS66 Orf2 like protein 10 45 1.1E-10 T 25-04-2017 IPR008878 Transposase IS66, Orf2 CLFO_RS08030 f6c7c8142ebfe66aea7999b1693d1741 104 Pfam PF05717 IS66 Orf2 like protein 43 93 6.9E-16 T 25-04-2017 IPR008878 Transposase IS66, Orf2 CLFO_RS20805 81beb63cac9912a84dfc8063e9c29677 462 PIRSF PIRSF006603 2 461 8.1E-137 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS20805 81beb63cac9912a84dfc8063e9c29677 462 Pfam PF01554 MatE 250 416 4.8E-27 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS20805 81beb63cac9912a84dfc8063e9c29677 462 Pfam PF01554 MatE 25 185 1.3E-34 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS20805 81beb63cac9912a84dfc8063e9c29677 462 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 429 2.3E-76 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS05680 dcb4845d181d85c7aca9566255ab9d54 138 Pfam PF12953 Domain of unknown function (DUF3842) 3 130 4.1E-49 T 25-04-2017 IPR024208 Protein of unknown function DUF3842 CLFO_RS17980 fc5d041871a846db72a77cf4218684e2 149 SUPERFAMILY SSF54631 1 147 8.46E-43 T 25-04-2017 CLFO_RS17980 fc5d041871a846db72a77cf4218684e2 149 SMART SM00116 100 147 7.2E-13 T 25-04-2017 IPR000644 CBS domain CLFO_RS17980 fc5d041871a846db72a77cf4218684e2 149 SMART SM00116 10 58 5.8E-15 T 25-04-2017 IPR000644 CBS domain CLFO_RS17980 fc5d041871a846db72a77cf4218684e2 149 Pfam PF00571 CBS domain 3 55 8.6E-19 T 25-04-2017 IPR000644 CBS domain CLFO_RS17980 fc5d041871a846db72a77cf4218684e2 149 Pfam PF00571 CBS domain 93 147 7.2E-17 T 25-04-2017 IPR000644 CBS domain CLFO_RS17980 fc5d041871a846db72a77cf4218684e2 149 Gene3D G3DSA:3.10.580.10 2 147 1.5E-38 T 25-04-2017 CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 Gene3D G3DSA:3.30.230.10 352 539 6.3E-53 T 25-04-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 Gene3D G3DSA:1.10.8.60 260 334 3.5E-6 T 25-04-2017 CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 SUPERFAMILY SSF52540 60 208 6.27E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 SUPERFAMILY SSF52540 239 332 6.27E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 97 270 8.9E-17 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 9 538 2.7E-262 T 25-04-2017 IPR014251 Sporulation protease LonB CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 SMART SM00382 93 272 1.2E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 Gene3D G3DSA:3.40.50.300 69 259 1.2E-39 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 476 495 2.8E-30 T 25-04-2017 CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 101 120 2.8E-30 T 25-04-2017 CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 446 465 2.8E-30 T 25-04-2017 CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 499 517 2.8E-30 T 25-04-2017 CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 372 2.8E-30 T 25-04-2017 CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 SUPERFAMILY SSF54211 355 540 3.38E-42 T 25-04-2017 IPR020568 Ribosomal protein S5 domain 2-type fold CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 177 192 - T 25-04-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 449 457 - T 25-04-2017 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CLFO_RS03040 a1686c1780b97ac564b95e1763883bcb 567 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 348 539 1.6E-32 T 25-04-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CLFO_RS16000 2a44345b22bb1e51a469fc6c4fa21f5f 580 SUPERFAMILY SSF90123 3 329 3.79E-54 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS16000 2a44345b22bb1e51a469fc6c4fa21f5f 580 Gene3D G3DSA:1.20.1560.10 5 322 1.6E-42 T 25-04-2017 CLFO_RS16000 2a44345b22bb1e51a469fc6c4fa21f5f 580 Gene3D G3DSA:3.40.50.300 334 563 5.5E-85 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16000 2a44345b22bb1e51a469fc6c4fa21f5f 580 SUPERFAMILY SSF52540 329 569 3.44E-91 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16000 2a44345b22bb1e51a469fc6c4fa21f5f 580 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS16000 2a44345b22bb1e51a469fc6c4fa21f5f 580 Pfam PF00664 ABC transporter transmembrane region 21 288 5.9E-20 T 25-04-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CLFO_RS16000 2a44345b22bb1e51a469fc6c4fa21f5f 580 ProSitePatterns PS00211 ABC transporters family signature. 8 22 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS16000 2a44345b22bb1e51a469fc6c4fa21f5f 580 SMART SM00382 359 545 4.6E-17 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS16000 2a44345b22bb1e51a469fc6c4fa21f5f 580 Pfam PF00005 ABC transporter 350 499 2.3E-34 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS18685 6416bc3335422ead9d0f23d8df3c5689 240 SMART SM00448 4 113 4.3E-18 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18685 6416bc3335422ead9d0f23d8df3c5689 240 Gene3D G3DSA:2.20.25.10 200 238 1.2E-14 T 25-04-2017 CLFO_RS18685 6416bc3335422ead9d0f23d8df3c5689 240 Pfam PF04397 LytTr DNA-binding domain 139 237 6.4E-26 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS18685 6416bc3335422ead9d0f23d8df3c5689 240 Gene3D G3DSA:3.40.50.2300 2 125 5.5E-26 T 25-04-2017 CLFO_RS18685 6416bc3335422ead9d0f23d8df3c5689 240 Pfam PF00072 Response regulator receiver domain 7 113 2.9E-19 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18685 6416bc3335422ead9d0f23d8df3c5689 240 SUPERFAMILY SSF52172 1 152 8.97E-27 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS18685 6416bc3335422ead9d0f23d8df3c5689 240 Gene3D G3DSA:2.40.50.40 131 199 7.6E-18 T 25-04-2017 CLFO_RS18685 6416bc3335422ead9d0f23d8df3c5689 240 SMART SM00850 139 238 5.7E-34 T 25-04-2017 IPR007492 LytTR DNA-binding domain GO:0003677 CLFO_RS08455 426b174bc2149c9eaf9aeaa376c466f1 229 Gene3D G3DSA:3.40.140.10 106 229 4.6E-48 T 25-04-2017 CLFO_RS08455 426b174bc2149c9eaf9aeaa376c466f1 229 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 178 183 - T 25-04-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site CLFO_RS08455 426b174bc2149c9eaf9aeaa376c466f1 229 Pfam PF04002 RadC-like JAB domain 109 227 1.4E-45 T 25-04-2017 IPR025657 RadC-like JAB domain CLFO_RS08455 426b174bc2149c9eaf9aeaa376c466f1 229 TIGRFAM TIGR00608 radc: DNA repair protein RadC 15 228 5.1E-73 T 25-04-2017 IPR001405 RadC protein CLFO_RS11340 00cc38b0e46f0d5022b20206ed250251 687 Gene3D G3DSA:2.40.50.140 48 143 8.3E-25 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS11340 00cc38b0e46f0d5022b20206ed250251 687 Gene3D G3DSA:3.40.50.300 445 627 4.4E-42 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11340 00cc38b0e46f0d5022b20206ed250251 687 Pfam PF00270 DEAD/DEAH box helicase 266 424 1.6E-19 T 25-04-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CLFO_RS11340 00cc38b0e46f0d5022b20206ed250251 687 SUPERFAMILY SSF52540 181 444 2.33E-63 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11340 00cc38b0e46f0d5022b20206ed250251 687 SMART SM00490 495 580 6.5E-20 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS11340 00cc38b0e46f0d5022b20206ed250251 687 Pfam PF00271 Helicase conserved C-terminal domain 463 579 3.9E-18 T 25-04-2017 IPR001650 Helicase, C-terminal CLFO_RS11340 00cc38b0e46f0d5022b20206ed250251 687 Gene3D G3DSA:3.40.50.300 253 444 4.5E-57 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11340 00cc38b0e46f0d5022b20206ed250251 687 SUPERFAMILY SSF50249 5 177 8.57E-46 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS11340 00cc38b0e46f0d5022b20206ed250251 687 Pfam PF17191 RecG wedge domain 11 175 4.5E-32 T 25-04-2017 IPR033454 RecG, wedge domain CLFO_RS11340 00cc38b0e46f0d5022b20206ed250251 687 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 30 654 1.4E-232 T 25-04-2017 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CLFO_RS11340 00cc38b0e46f0d5022b20206ed250251 687 SMART SM00487 260 450 1.3E-36 T 25-04-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLFO_RS11340 00cc38b0e46f0d5022b20206ed250251 687 SUPERFAMILY SSF52540 376 636 1.78E-40 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10720 beb26ca3ebc5cc77d1d2fb6cb5aca8f1 466 Pfam PF00682 HMGL-like 5 270 9.6E-47 T 25-04-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLFO_RS10720 beb26ca3ebc5cc77d1d2fb6cb5aca8f1 466 Gene3D G3DSA:1.10.10.60 414 443 1.7E-4 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS10720 beb26ca3ebc5cc77d1d2fb6cb5aca8f1 466 SUPERFAMILY SSF51569 2 280 2.75E-89 T 25-04-2017 CLFO_RS10720 beb26ca3ebc5cc77d1d2fb6cb5aca8f1 466 Pfam PF02436 Conserved carboxylase domain 297 447 3.0E-50 T 25-04-2017 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CLFO_RS10720 beb26ca3ebc5cc77d1d2fb6cb5aca8f1 466 Gene3D G3DSA:3.20.20.70 2 278 3.5E-118 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS10720 beb26ca3ebc5cc77d1d2fb6cb5aca8f1 466 SUPERFAMILY SSF89000 300 450 4.32E-51 T 25-04-2017 CLFO_RS15910 925a4cd2fd7868f87f805d295e1569a9 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 272 7.8E-33 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15910 925a4cd2fd7868f87f805d295e1569a9 281 Gene3D G3DSA:1.10.3720.10 67 271 4.7E-25 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15910 925a4cd2fd7868f87f805d295e1569a9 281 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 42 1.3E-5 T 25-04-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLFO_RS15910 925a4cd2fd7868f87f805d295e1569a9 281 SUPERFAMILY SSF161098 68 257 9.55E-26 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS00625 01b8a5d24134a8c8a27b8139b3b100ca 793 SMART SM00331 578 789 2.3E-30 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS00625 01b8a5d24134a8c8a27b8139b3b100ca 793 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 605 789 3.8E-30 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS00625 01b8a5d24134a8c8a27b8139b3b100ca 793 Gene3D G3DSA:3.60.40.10 714 788 1.6E-7 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS00625 01b8a5d24134a8c8a27b8139b3b100ca 793 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 33 790 1.7E-221 T 25-04-2017 IPR014221 Sporulation stage II, protein E KEGG: 04660+3.1.3.16 CLFO_RS00625 01b8a5d24134a8c8a27b8139b3b100ca 793 SUPERFAMILY SSF81606 588 788 9.68E-17 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS20570 e93288a3cf3d82638d31992b98eef7cb 446 Gene3D G3DSA:3.40.640.10 93 338 2.2E-22 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS20570 e93288a3cf3d82638d31992b98eef7cb 446 Pfam PF02347 Glycine cleavage system P-protein 2 443 4.0E-147 T 25-04-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CLFO_RS20570 e93288a3cf3d82638d31992b98eef7cb 446 PIRSF PIRSF006815 2 446 6.3E-200 T 25-04-2017 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 CLFO_RS20570 e93288a3cf3d82638d31992b98eef7cb 446 SUPERFAMILY SSF53383 2 444 1.24E-117 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS20570 e93288a3cf3d82638d31992b98eef7cb 446 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 2 446 49.278 T 25-04-2017 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 CLFO_RS14385 6f35992b709fa96ed4c5b351e2cff118 232 Pfam PF04239 Protein of unknown function (DUF421) 90 206 1.3E-31 T 25-04-2017 IPR007353 Protein of unknown function DUF421 CLFO_RS14385 6f35992b709fa96ed4c5b351e2cff118 232 Gene3D G3DSA:3.30.240.20 82 155 4.7E-26 T 25-04-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLFO_RS14385 6f35992b709fa96ed4c5b351e2cff118 232 Gene3D G3DSA:3.30.240.20 171 229 8.6E-17 T 25-04-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLFO_RS03975 fd26e2a4e7e9ec30782c34c344a9e555 435 SUPERFAMILY SSF102114 43 186 6.8E-14 T 25-04-2017 CLFO_RS03975 fd26e2a4e7e9ec30782c34c344a9e555 435 Gene3D G3DSA:3.20.20.70 48 183 1.6E-8 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS03975 fd26e2a4e7e9ec30782c34c344a9e555 435 SUPERFAMILY SSF47781 300 379 1.63E-12 T 25-04-2017 IPR010994 RuvA domain 2-like CLFO_RS03975 fd26e2a4e7e9ec30782c34c344a9e555 435 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 3 417 1.0E-201 T 25-04-2017 IPR023874 DNA modification/repair radical SAM protein, putative CLFO_RS02770 8a08f8581dc82430bee9b3af43637825 260 Pfam PF02535 ZIP Zinc transporter 114 255 1.5E-25 T 25-04-2017 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CLFO_RS09465 1ae8b079cf548ef34f20828d5a251491 390 Gene3D G3DSA:3.40.50.2300 3 128 6.8E-33 T 25-04-2017 CLFO_RS09465 1ae8b079cf548ef34f20828d5a251491 390 Pfam PF08668 HDOD domain 137 332 2.9E-42 T 25-04-2017 IPR013976 Metal-dependent hydrolase HDOD CLFO_RS09465 1ae8b079cf548ef34f20828d5a251491 390 Pfam PF00072 Response regulator receiver domain 5 115 4.9E-23 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS09465 1ae8b079cf548ef34f20828d5a251491 390 SUPERFAMILY SSF52172 3 128 3.27E-31 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS09465 1ae8b079cf548ef34f20828d5a251491 390 SUPERFAMILY SSF109604 129 385 2.22E-48 T 25-04-2017 CLFO_RS09465 1ae8b079cf548ef34f20828d5a251491 390 Gene3D G3DSA:1.10.3150.10 129 388 7.8E-56 T 25-04-2017 IPR013976 Metal-dependent hydrolase HDOD CLFO_RS09465 1ae8b079cf548ef34f20828d5a251491 390 SMART SM00448 3 115 6.0E-24 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS16940 b1e92865ddab850e95f68d00d614a6c5 116 Pfam PF05717 IS66 Orf2 like protein 9 104 2.9E-34 T 25-04-2017 IPR008878 Transposase IS66, Orf2 CLFO_RS02965 41c1f153f30387df1d84a1384614f32f 481 Pfam PF07833 Copper amine oxidase N-terminal domain 363 462 6.1E-27 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02965 41c1f153f30387df1d84a1384614f32f 481 Gene3D G3DSA:3.30.457.10 346 373 4.2E-5 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02965 41c1f153f30387df1d84a1384614f32f 481 Gene3D G3DSA:3.30.457.10 445 473 2.6E-7 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02965 41c1f153f30387df1d84a1384614f32f 481 Gene3D G3DSA:3.30.457.10 374 444 6.7E-21 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02965 41c1f153f30387df1d84a1384614f32f 481 SUPERFAMILY SSF55383 366 457 2.44E-20 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS02965 41c1f153f30387df1d84a1384614f32f 481 Pfam PF14903 WG containing repeat 296 323 1.5E-6 T 25-04-2017 IPR032774 WG containing repeat CLFO_RS02965 41c1f153f30387df1d84a1384614f32f 481 Pfam PF14903 WG containing repeat 211 237 7.6E-6 T 25-04-2017 IPR032774 WG containing repeat CLFO_RS02965 41c1f153f30387df1d84a1384614f32f 481 Pfam PF14903 WG containing repeat 52 80 2.3E-6 T 25-04-2017 IPR032774 WG containing repeat CLFO_RS02965 41c1f153f30387df1d84a1384614f32f 481 Pfam PF14903 WG containing repeat 263 291 2.4E-4 T 25-04-2017 IPR032774 WG containing repeat CLFO_RS02965 41c1f153f30387df1d84a1384614f32f 481 Pfam PF14903 WG containing repeat 171 203 0.014 T 25-04-2017 IPR032774 WG containing repeat CLFO_RS11060 3600c58375e57dcb473f0e33c503db51 120 SMART SM00448 3 115 5.1E-37 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS11060 3600c58375e57dcb473f0e33c503db51 120 SUPERFAMILY SSF52172 4 119 7.26E-39 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS11060 3600c58375e57dcb473f0e33c503db51 120 Gene3D G3DSA:3.40.50.2300 4 119 1.1E-39 T 25-04-2017 CLFO_RS11060 3600c58375e57dcb473f0e33c503db51 120 Pfam PF00072 Response regulator receiver domain 5 116 6.6E-33 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS09155 b4f7ae6f54af6097998050a9ab27a028 334 SUPERFAMILY SSF53756 46 326 3.19E-36 T 25-04-2017 CLFO_RS09155 b4f7ae6f54af6097998050a9ab27a028 334 Gene3D G3DSA:3.40.50.2000 141 298 1.8E-9 T 25-04-2017 CLFO_RS09155 b4f7ae6f54af6097998050a9ab27a028 334 Pfam PF00534 Glycosyl transferases group 1 167 307 7.6E-13 T 25-04-2017 IPR001296 Glycosyl transferase, family 1 CLFO_RS09760 c2e84352638535c4a82e3a3f6ce3de9f 438 SUPERFAMILY SSF50156 153 234 6.05E-8 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS09760 c2e84352638535c4a82e3a3f6ce3de9f 438 Gene3D G3DSA:2.30.42.10 112 206 1.8E-8 T 25-04-2017 IPR001478 PDZ domain GO:0005515 CLFO_RS09760 c2e84352638535c4a82e3a3f6ce3de9f 438 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 5 427 1.3E-148 T 25-04-2017 IPR014219 Peptidase S55, sporulation stage IV, protein B CLFO_RS09760 c2e84352638535c4a82e3a3f6ce3de9f 438 Pfam PF05580 SpoIVB peptidase S55 213 422 2.4E-88 T 25-04-2017 IPR008763 Peptidase S55, SpoIVB CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 804 0.0 T 25-04-2017 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 602 5.8E-9 T 25-04-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 708 754 2.8E-10 T 25-04-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 758 804 8.3E-12 T 25-04-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 609 653 3.0E-10 T 25-04-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 658 703 3.0E-16 T 25-04-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 503 548 1.0E-10 T 25-04-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 4 806 25.022 T 25-04-2017 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 SUPERFAMILY SSF56719 30 487 3.01E-183 T 25-04-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 SMART SM00434 11 464 1.4E-288 T 25-04-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 SUPERFAMILY SSF101904 498 813 7.32E-112 T 25-04-2017 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 Gene3D G3DSA:3.30.1360.40 236 331 3.8E-41 T 25-04-2017 IPR024946 Arginine repressor C-terminal-like domain CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 Gene3D G3DSA:2.120.10.90 496 804 1.2E-129 T 25-04-2017 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 471 1.6E-163 T 25-04-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 Gene3D G3DSA:3.90.199.10 333 397 2.4E-122 T 25-04-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS00035 ae5db107e4fc8b006493b7725716fbff 814 Gene3D G3DSA:3.90.199.10 30 235 2.4E-122 T 25-04-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS15025 8fa74d4429d98998e0cbf252a81657d3 232 SUPERFAMILY SSF52540 3 219 1.22E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15025 8fa74d4429d98998e0cbf252a81657d3 232 Pfam PF00005 ABC transporter 22 165 2.5E-33 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15025 8fa74d4429d98998e0cbf252a81657d3 232 Gene3D G3DSA:3.40.50.300 2 218 4.8E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15025 8fa74d4429d98998e0cbf252a81657d3 232 SMART SM00382 31 214 5.5E-15 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15025 8fa74d4429d98998e0cbf252a81657d3 232 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS14005 9674bc17d6902a2eed4c83b81cbedde8 212 SUPERFAMILY SSF47644 2 85 5.89E-16 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS14005 9674bc17d6902a2eed4c83b81cbedde8 212 SUPERFAMILY SSF52242 74 210 1.27E-40 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS14005 9674bc17d6902a2eed4c83b81cbedde8 212 Gene3D G3DSA:1.10.1240.10 5 77 1.4E-10 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS14005 9674bc17d6902a2eed4c83b81cbedde8 212 Gene3D G3DSA:3.40.50.280 78 211 1.2E-46 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS14005 9674bc17d6902a2eed4c83b81cbedde8 212 Pfam PF02310 B12 binding domain 92 185 8.9E-23 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS14005 9674bc17d6902a2eed4c83b81cbedde8 212 SMART SM01018 1 86 9.9E-17 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS14005 9674bc17d6902a2eed4c83b81cbedde8 212 Pfam PF02607 B12 binding domain 5 78 4.1E-10 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS18190 1533daa68fb2b6724ea6c9b6dc94a344 481 SUPERFAMILY SSF53756 2 480 9.07E-127 T 25-04-2017 CLFO_RS18190 1533daa68fb2b6724ea6c9b6dc94a344 481 Pfam PF00534 Glycosyl transferases group 1 292 440 4.5E-12 T 25-04-2017 IPR001296 Glycosyl transferase, family 1 CLFO_RS18190 1533daa68fb2b6724ea6c9b6dc94a344 481 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 478 1.5E-175 T 25-04-2017 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CLFO_RS18190 1533daa68fb2b6724ea6c9b6dc94a344 481 Pfam PF08323 Starch synthase catalytic domain 2 239 3.2E-85 T 25-04-2017 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CLFO_RS18190 1533daa68fb2b6724ea6c9b6dc94a344 481 Hamap MF_00484 Glycogen synthase [glgA]. 1 478 46.177 T 25-04-2017 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CLFO_RS18190 1533daa68fb2b6724ea6c9b6dc94a344 481 Gene3D G3DSA:3.40.50.2000 254 459 1.5E-68 T 25-04-2017 CLFO_RS03600 0743aea145620df99c239b16ff15e367 76 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 75 1.0E-14 T 25-04-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS03600 0743aea145620df99c239b16ff15e367 76 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 9.7E-28 T 25-04-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS03600 0743aea145620df99c239b16ff15e367 76 SUPERFAMILY SSF47336 2 75 5.1E-24 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS03600 0743aea145620df99c239b16ff15e367 76 Hamap MF_01217 Acyl carrier protein [acpP]. 1 76 21.037 T 25-04-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS03600 0743aea145620df99c239b16ff15e367 76 Gene3D G3DSA:1.10.1200.10 2 75 2.9E-29 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS03600 0743aea145620df99c239b16ff15e367 76 Pfam PF00550 Phosphopantetheine attachment site 4 72 2.8E-18 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS00820 84607bf7b2cb4d11cba3e5343d555cad 246 SUPERFAMILY SSF55154 10 63 3.05E-6 T 25-04-2017 IPR033469 CYTH-like domain Reactome: R-HSA-196819 CLFO_RS00820 84607bf7b2cb4d11cba3e5343d555cad 246 Pfam PF09359 VTC domain 7 232 2.9E-36 T 25-04-2017 IPR018966 VTC domain CLFO_RS13625 e47e75845da67928c803382d2577c5c6 213 SUPERFAMILY SSF52141 34 198 6.87E-19 T 25-04-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLFO_RS13625 e47e75845da67928c803382d2577c5c6 213 Gene3D G3DSA:3.40.470.10 68 184 1.2E-7 T 25-04-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLFO_RS13625 e47e75845da67928c803382d2577c5c6 213 Pfam PF03167 Uracil DNA glycosylase superfamily 54 193 3.9E-8 T 25-04-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLFO_RS13625 e47e75845da67928c803382d2577c5c6 213 Gene3D G3DSA:3.40.470.10 2 67 5.7E-9 T 25-04-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLFO_RS00940 c1373c6736594fc8b48ce289eb5ed530 402 Pfam PF01098 Cell cycle protein 58 390 3.0E-79 T 25-04-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CLFO_RS16715 35e1d1bd89be3d172f55cb974ae404d4 519 Pfam PF12833 Helix-turn-helix domain 438 517 1.1E-19 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS16715 35e1d1bd89be3d172f55cb974ae404d4 519 Gene3D G3DSA:1.10.10.60 413 468 2.5E-16 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16715 35e1d1bd89be3d172f55cb974ae404d4 519 Gene3D G3DSA:3.40.50.2300 7 130 2.1E-32 T 25-04-2017 CLFO_RS16715 35e1d1bd89be3d172f55cb974ae404d4 519 Gene3D G3DSA:1.10.10.60 469 517 4.9E-16 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16715 35e1d1bd89be3d172f55cb974ae404d4 519 SUPERFAMILY SSF46689 468 517 5.38E-12 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16715 35e1d1bd89be3d172f55cb974ae404d4 519 SMART SM00448 8 123 2.2E-25 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS16715 35e1d1bd89be3d172f55cb974ae404d4 519 Pfam PF00072 Response regulator receiver domain 10 112 3.7E-27 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS16715 35e1d1bd89be3d172f55cb974ae404d4 519 SUPERFAMILY SSF46689 417 466 1.16E-7 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS16715 35e1d1bd89be3d172f55cb974ae404d4 519 SMART SM00342 432 515 5.0E-29 T 25-04-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CLFO_RS16715 35e1d1bd89be3d172f55cb974ae404d4 519 SUPERFAMILY SSF52172 7 127 2.85E-31 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS15980 4b73e12fd40910c37b70fdd22d9ddd55 219 Pfam PF06508 Queuosine biosynthesis protein QueC 3 210 5.9E-79 T 25-04-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CLFO_RS15980 4b73e12fd40910c37b70fdd22d9ddd55 219 PIRSF PIRSF006293 1 219 4.3E-79 T 25-04-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CLFO_RS15980 4b73e12fd40910c37b70fdd22d9ddd55 219 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 203 2.1E-66 T 25-04-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CLFO_RS15980 4b73e12fd40910c37b70fdd22d9ddd55 219 Gene3D G3DSA:3.40.50.620 1 218 1.3E-80 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS15980 4b73e12fd40910c37b70fdd22d9ddd55 219 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 216 54.989 T 25-04-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CLFO_RS15980 4b73e12fd40910c37b70fdd22d9ddd55 219 SUPERFAMILY SSF52402 1 218 1.54E-65 T 25-04-2017 CLFO_RS09335 ce198d7a24654c52dcd4195459cceacc 181 Pfam PF13411 MerR HTH family regulatory protein 2 70 3.5E-15 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS09335 ce198d7a24654c52dcd4195459cceacc 181 Gene3D G3DSA:1.10.1660.10 1 104 2.6E-27 T 25-04-2017 CLFO_RS09335 ce198d7a24654c52dcd4195459cceacc 181 SUPERFAMILY SSF46955 1 100 2.49E-25 T 25-04-2017 IPR009061 Putative DNA-binding domain CLFO_RS09335 ce198d7a24654c52dcd4195459cceacc 181 SMART SM00422 2 71 2.9E-21 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS09335 ce198d7a24654c52dcd4195459cceacc 181 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.9E-5 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS09335 ce198d7a24654c52dcd4195459cceacc 181 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.9E-5 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS09335 ce198d7a24654c52dcd4195459cceacc 181 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.9E-5 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS12195 a75ea6bb7ac68f596343c890dd21722a 449 Gene3D G3DSA:3.40.190.10 186 374 7.1E-44 T 25-04-2017 CLFO_RS12195 a75ea6bb7ac68f596343c890dd21722a 449 Gene3D G3DSA:3.40.190.10 52 185 1.5E-15 T 25-04-2017 CLFO_RS12195 a75ea6bb7ac68f596343c890dd21722a 449 Pfam PF13416 Bacterial extracellular solute-binding protein 68 381 4.3E-40 T 25-04-2017 CLFO_RS12195 a75ea6bb7ac68f596343c890dd21722a 449 SUPERFAMILY SSF53850 18 442 3.02E-70 T 25-04-2017 CLFO_RS02885 9cd48d8c6dd47182aa6be18fa7aa2dd2 248 Gene3D G3DSA:3.40.50.7700 120 246 6.9E-26 T 25-04-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLFO_RS02885 9cd48d8c6dd47182aa6be18fa7aa2dd2 248 SMART SM01001 119 248 1.8E-35 T 25-04-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLFO_RS02885 9cd48d8c6dd47182aa6be18fa7aa2dd2 248 SUPERFAMILY SSF52255 120 247 1.19E-29 T 25-04-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLFO_RS02885 9cd48d8c6dd47182aa6be18fa7aa2dd2 248 Pfam PF00731 AIR carboxylase 121 245 1.0E-16 T 25-04-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CLFO_RS01195 412d87de245c6eae6cd18cdc805d2688 152 Pfam PF04892 VanZ like family 10 143 5.3E-27 T 25-04-2017 IPR006976 VanZ-like CLFO_RS01195 412d87de245c6eae6cd18cdc805d2688 152 PIRSF PIRSF019083 1 152 7.4E-43 T 25-04-2017 IPR016747 Phosphotransbutyrylase CLFO_RS19730 8064e70a6ef0e0d97b040a73b23b3986 138 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 1.5E-66 T 25-04-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19730 8064e70a6ef0e0d97b040a73b23b3986 138 SUPERFAMILY SSF50249 3 137 8.0E-49 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS19730 8064e70a6ef0e0d97b040a73b23b3986 138 Pfam PF00164 Ribosomal protein S12/S23 3 136 7.8E-41 T 25-04-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19730 8064e70a6ef0e0d97b040a73b23b3986 138 PRINTS PR01034 Ribosomal protein S12 signature 123 135 1.4E-58 T 25-04-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19730 8064e70a6ef0e0d97b040a73b23b3986 138 PRINTS PR01034 Ribosomal protein S12 signature 40 55 1.4E-58 T 25-04-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19730 8064e70a6ef0e0d97b040a73b23b3986 138 PRINTS PR01034 Ribosomal protein S12 signature 71 90 1.4E-58 T 25-04-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19730 8064e70a6ef0e0d97b040a73b23b3986 138 PRINTS PR01034 Ribosomal protein S12 signature 90 107 1.4E-58 T 25-04-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19730 8064e70a6ef0e0d97b040a73b23b3986 138 PRINTS PR01034 Ribosomal protein S12 signature 55 70 1.4E-58 T 25-04-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19730 8064e70a6ef0e0d97b040a73b23b3986 138 PRINTS PR01034 Ribosomal protein S12 signature 107 123 1.4E-58 T 25-04-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19730 8064e70a6ef0e0d97b040a73b23b3986 138 Gene3D G3DSA:2.40.50.140 1 137 1.1E-62 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS19730 8064e70a6ef0e0d97b040a73b23b3986 138 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 25-04-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19730 8064e70a6ef0e0d97b040a73b23b3986 138 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 40.775 T 25-04-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11780 c665d557418c9cc32b7bbdf31266485a 385 SUPERFAMILY SSF53800 92 330 1.28E-13 T 25-04-2017 CLFO_RS11780 c665d557418c9cc32b7bbdf31266485a 385 Gene3D G3DSA:3.40.50.1400 153 204 6.2E-4 T 25-04-2017 CLFO_RS11665 ab1107659eb0ba89ce4311304f1b65f8 271 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 37 269 1.2E-59 T 25-04-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CLFO_RS11665 ab1107659eb0ba89ce4311304f1b65f8 271 SUPERFAMILY SSF64438 11 269 4.58E-81 T 25-04-2017 IPR011324 Cytotoxic necrotizing factor-like, catalytic CLFO_RS11665 ab1107659eb0ba89ce4311304f1b65f8 271 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 30 267 3.3E-76 T 25-04-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CLFO_RS11665 ab1107659eb0ba89ce4311304f1b65f8 271 Gene3D G3DSA:3.60.140.10 6 269 1.8E-84 T 25-04-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CLFO_RS10825 1deb7ac8b65cf9c3ad37c094d1f19190 758 Gene3D G3DSA:3.40.50.300 373 652 1.7E-90 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10825 1deb7ac8b65cf9c3ad37c094d1f19190 758 SUPERFAMILY SSF46785 687 750 4.31E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10825 1deb7ac8b65cf9c3ad37c094d1f19190 758 Pfam PF01580 FtsK/SpoIIIE family 537 586 4.5E-15 T 25-04-2017 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CLFO_RS10825 1deb7ac8b65cf9c3ad37c094d1f19190 758 Pfam PF01580 FtsK/SpoIIIE family 399 536 3.4E-47 T 25-04-2017 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CLFO_RS10825 1deb7ac8b65cf9c3ad37c094d1f19190 758 SMART SM00843 685 750 5.3E-41 T 25-04-2017 IPR018541 FtsK gamma domain CLFO_RS10825 1deb7ac8b65cf9c3ad37c094d1f19190 758 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 56 196 1.0E-6 T 25-04-2017 IPR025199 DNA translocase FtsK, 4TM region CLFO_RS10825 1deb7ac8b65cf9c3ad37c094d1f19190 758 Pfam PF09397 Ftsk gamma domain 687 747 2.3E-31 T 25-04-2017 IPR018541 FtsK gamma domain CLFO_RS10825 1deb7ac8b65cf9c3ad37c094d1f19190 758 SMART SM00382 434 607 1.1E-4 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS10825 1deb7ac8b65cf9c3ad37c094d1f19190 758 SUPERFAMILY SSF52540 373 658 4.65E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10705 e25ec2340db5b42857d0fa169451c137 288 SUPERFAMILY SSF53697 101 262 4.23E-29 T 25-04-2017 CLFO_RS10705 e25ec2340db5b42857d0fa169451c137 288 Gene3D G3DSA:1.10.10.10 4 67 1.1E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10705 e25ec2340db5b42857d0fa169451c137 288 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 75 1.0E-14 T 25-04-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CLFO_RS10705 e25ec2340db5b42857d0fa169451c137 288 SUPERFAMILY SSF46689 6 77 5.02E-20 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS10705 e25ec2340db5b42857d0fa169451c137 288 Pfam PF01380 SIS domain 132 258 2.7E-26 T 25-04-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 CLFO_RS10705 e25ec2340db5b42857d0fa169451c137 288 Gene3D G3DSA:3.40.50.10490 68 78 3.9E-26 T 25-04-2017 CLFO_RS10705 e25ec2340db5b42857d0fa169451c137 288 Gene3D G3DSA:3.40.50.10490 112 277 3.9E-26 T 25-04-2017 CLFO_RS10710 ca8b64bcb099e4488e788af578bc1c63 254 SUPERFAMILY SSF64167 1 250 1.16E-79 T 25-04-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CLFO_RS10710 ca8b64bcb099e4488e788af578bc1c63 254 Pfam PF01975 Survival protein SurE 3 189 7.6E-62 T 25-04-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CLFO_RS10710 ca8b64bcb099e4488e788af578bc1c63 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 254 37.211 T 25-04-2017 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CLFO_RS10710 ca8b64bcb099e4488e788af578bc1c63 254 Gene3D G3DSA:3.40.1210.10 1 250 3.2E-91 T 25-04-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CLFO_RS10710 ca8b64bcb099e4488e788af578bc1c63 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 239 1.8E-72 T 25-04-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CLFO_RS11410 da683beaef7a3756fee5f9d3f045cac9 147 SUPERFAMILY SSF56420 3 146 5.36E-54 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS11410 da683beaef7a3756fee5f9d3f045cac9 147 PIRSF PIRSF004749 1 147 4.3E-51 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS11410 da683beaef7a3756fee5f9d3f045cac9 147 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 145 1.5E-48 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS11410 da683beaef7a3756fee5f9d3f045cac9 147 PRINTS PR01576 Peptide deformylase signature 33 62 5.6E-36 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS11410 da683beaef7a3756fee5f9d3f045cac9 147 PRINTS PR01576 Peptide deformylase signature 86 97 5.6E-36 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS11410 da683beaef7a3756fee5f9d3f045cac9 147 PRINTS PR01576 Peptide deformylase signature 117 146 5.6E-36 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS11410 da683beaef7a3756fee5f9d3f045cac9 147 PRINTS PR01576 Peptide deformylase signature 98 116 5.6E-36 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS11410 da683beaef7a3756fee5f9d3f045cac9 147 Hamap MF_00163 Peptide deformylase [def]. 2 147 27.733 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS11410 da683beaef7a3756fee5f9d3f045cac9 147 Gene3D G3DSA:3.90.45.10 6 146 2.1E-54 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS11410 da683beaef7a3756fee5f9d3f045cac9 147 Pfam PF01327 Polypeptide deformylase 4 146 5.0E-48 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS05450 c9f486f7c2c4773683e54a5ec0372855 358 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 25-04-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CLFO_RS05450 c9f486f7c2c4773683e54a5ec0372855 358 Gene3D G3DSA:3.40.718.10 1 358 2.4E-136 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS05450 c9f486f7c2c4773683e54a5ec0372855 358 SMART SM01329 4 353 4.9E-205 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS05450 c9f486f7c2c4773683e54a5ec0372855 358 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 5.1E-162 T 25-04-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CLFO_RS05450 c9f486f7c2c4773683e54a5ec0372855 358 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 51.525 T 25-04-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CLFO_RS05450 c9f486f7c2c4773683e54a5ec0372855 358 SUPERFAMILY SSF53659 1 357 7.92E-128 T 25-04-2017 CLFO_RS05450 c9f486f7c2c4773683e54a5ec0372855 358 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 353 2.3E-143 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS16610 238d2319bf364e71a1d3a3c6c0c4f85d 164 Gene3D G3DSA:2.60.120.10 41 161 2.5E-42 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS16610 238d2319bf364e71a1d3a3c6c0c4f85d 164 SUPERFAMILY SSF51182 5 146 6.84E-25 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS16610 238d2319bf364e71a1d3a3c6c0c4f85d 164 Pfam PF07883 Cupin domain 66 141 1.5E-12 T 25-04-2017 IPR013096 Cupin 2, conserved barrel CLFO_RS09560 4d1db928c74b49cc155fbfd379f02e86 404 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 25-04-2017 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CLFO_RS09560 4d1db928c74b49cc155fbfd379f02e86 404 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 5.0E-30 T 25-04-2017 IPR018076 Type II secretion system F domain CLFO_RS09560 4d1db928c74b49cc155fbfd379f02e86 404 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.9E-29 T 25-04-2017 IPR018076 Type II secretion system F domain CLFO_RS09560 4d1db928c74b49cc155fbfd379f02e86 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 6.3E-22 T 25-04-2017 IPR003004 GspF/PilC family CLFO_RS09560 4d1db928c74b49cc155fbfd379f02e86 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 6.3E-22 T 25-04-2017 IPR003004 GspF/PilC family CLFO_RS09560 4d1db928c74b49cc155fbfd379f02e86 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 6.3E-22 T 25-04-2017 IPR003004 GspF/PilC family CLFO_RS09560 4d1db928c74b49cc155fbfd379f02e86 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 6.3E-22 T 25-04-2017 IPR003004 GspF/PilC family CLFO_RS07060 346871a67f337e06321d5a402c6b3ce8 381 PRINTS PR00173 Glutamate-aspartate symporter signature 304 323 1.8E-8 T 25-04-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CLFO_RS07060 346871a67f337e06321d5a402c6b3ce8 381 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.8E-8 T 25-04-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CLFO_RS07060 346871a67f337e06321d5a402c6b3ce8 381 PRINTS PR00173 Glutamate-aspartate symporter signature 269 295 1.8E-8 T 25-04-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CLFO_RS07060 346871a67f337e06321d5a402c6b3ce8 381 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 1.8E-8 T 25-04-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CLFO_RS07060 346871a67f337e06321d5a402c6b3ce8 381 Pfam PF00375 Sodium:dicarboxylate symporter family 6 378 1.2E-82 T 25-04-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CLFO_RS07060 346871a67f337e06321d5a402c6b3ce8 381 Gene3D G3DSA:1.10.3860.10 1 380 5.7E-63 T 25-04-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CLFO_RS07060 346871a67f337e06321d5a402c6b3ce8 381 SUPERFAMILY SSF118215 6 378 4.84E-83 T 25-04-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CLFO_RS07995 225828ead0acd20ac11ff4a446b8235a 527 Pfam PF00239 Resolvase, N terminal domain 4 150 9.2E-40 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS07995 225828ead0acd20ac11ff4a446b8235a 527 SUPERFAMILY SSF53041 1 150 1.44E-38 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS07995 225828ead0acd20ac11ff4a446b8235a 527 Gene3D G3DSA:3.40.50.1390 1 133 9.9E-33 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS07995 225828ead0acd20ac11ff4a446b8235a 527 Pfam PF13408 Recombinase zinc beta ribbon domain 329 391 3.1E-10 T 25-04-2017 IPR025827 Recombinase zinc beta ribbon domain CLFO_RS07995 225828ead0acd20ac11ff4a446b8235a 527 Pfam PF07508 Recombinase 183 315 3.4E-19 T 25-04-2017 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CLFO_RS07995 225828ead0acd20ac11ff4a446b8235a 527 SMART SM00857 3 150 1.1E-58 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS14885 b59e2af36c8355d159dacdbec2bb0416 292 SUPERFAMILY SSF51735 2 165 1.28E-28 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14885 b59e2af36c8355d159dacdbec2bb0416 292 Pfam PF10727 Rossmann-like domain 2 108 3.1E-11 T 25-04-2017 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain CLFO_RS14885 b59e2af36c8355d159dacdbec2bb0416 292 Pfam PF10728 Domain of unknown function (DUF2520) 137 264 1.5E-35 T 25-04-2017 IPR018931 Domain of unknown function DUF2520 CLFO_RS14885 b59e2af36c8355d159dacdbec2bb0416 292 SUPERFAMILY SSF48179 169 270 3.13E-26 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS14885 b59e2af36c8355d159dacdbec2bb0416 292 Gene3D G3DSA:1.10.1040.20 168 269 8.0E-31 T 25-04-2017 IPR018931 Domain of unknown function DUF2520 CLFO_RS14885 b59e2af36c8355d159dacdbec2bb0416 292 Gene3D G3DSA:3.40.50.720 1 164 5.7E-43 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS12005 c700e3462da8b2dcf2df715c153eaab3 294 Pfam PF01905 CRISPR-associated negative auto-regulator DevR/Csa2 11 218 1.0E-33 T 25-04-2017 IPR010154 CRISPR-associated protein Cas7/Cst2/DevR CLFO_RS12005 c700e3462da8b2dcf2df715c153eaab3 294 TIGRFAM TIGR02585 cas_Cst2_DevR: CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP 13 290 1.1E-64 T 25-04-2017 IPR013414 CRISPR-associated protein Cas7, subtype I-B/Tneap CLFO_RS12005 c700e3462da8b2dcf2df715c153eaab3 294 TIGRFAM TIGR01875 cas_MJ0381: CRISPR-associated autoregulator DevR family 13 224 1.5E-48 T 25-04-2017 IPR010154 CRISPR-associated protein Cas7/Cst2/DevR CLFO_RS09980 04e8cc0e82f8688fe6f21d779bbfcd31 320 SUPERFAMILY SSF53807 42 304 5.1E-65 T 25-04-2017 CLFO_RS09980 04e8cc0e82f8688fe6f21d779bbfcd31 320 Gene3D G3DSA:3.40.50.1980 173 319 4.4E-30 T 25-04-2017 CLFO_RS09980 04e8cc0e82f8688fe6f21d779bbfcd31 320 Pfam PF01497 Periplasmic binding protein 63 294 5.7E-33 T 25-04-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CLFO_RS09980 04e8cc0e82f8688fe6f21d779bbfcd31 320 Gene3D G3DSA:3.40.50.1980 44 167 9.5E-34 T 25-04-2017 CLFO_RS16175 d7f7e565e3dbd65d07c5b25561ef1945 284 Gene3D G3DSA:3.40.109.10 3 149 5.2E-33 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS16175 d7f7e565e3dbd65d07c5b25561ef1945 284 Pfam PF14512 Putative TM nitroreductase 9 250 4.0E-43 T 25-04-2017 IPR029478 Putative nitroreductase TM1586 CLFO_RS16175 d7f7e565e3dbd65d07c5b25561ef1945 284 SUPERFAMILY SSF55469 10 247 1.22E-27 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS16175 d7f7e565e3dbd65d07c5b25561ef1945 284 Gene3D G3DSA:3.40.109.30 178 263 9.6E-15 T 25-04-2017 CLFO_RS10260 c8f31c8e07beadb702ada9e745e84cd6 208 Pfam PF00717 Peptidase S24-like 128 194 2.2E-18 T 25-04-2017 IPR019759 Peptidase S24/S26A/S26B CLFO_RS10260 c8f31c8e07beadb702ada9e745e84cd6 208 SUPERFAMILY SSF46785 4 71 5.15E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10260 c8f31c8e07beadb702ada9e745e84cd6 208 TIGRFAM TIGR00498 lexA: repressor LexA 3 208 8.9E-78 T 25-04-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CLFO_RS10260 c8f31c8e07beadb702ada9e745e84cd6 208 Hamap MF_00015 LexA repressor [lexA]. 4 208 34.333 T 25-04-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CLFO_RS10260 c8f31c8e07beadb702ada9e745e84cd6 208 Gene3D G3DSA:2.10.109.10 87 208 1.9E-44 T 25-04-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain CLFO_RS10260 c8f31c8e07beadb702ada9e745e84cd6 208 Gene3D G3DSA:1.10.10.10 3 70 3.9E-32 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10260 c8f31c8e07beadb702ada9e745e84cd6 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 135 146 6.0E-10 T 25-04-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLFO_RS10260 c8f31c8e07beadb702ada9e745e84cd6 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 163 175 6.0E-10 T 25-04-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLFO_RS10260 c8f31c8e07beadb702ada9e745e84cd6 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 124 134 6.0E-10 T 25-04-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CLFO_RS10260 c8f31c8e07beadb702ada9e745e84cd6 208 SUPERFAMILY SSF51306 85 206 3.27E-36 T 25-04-2017 IPR015927 Peptidase S24/S26A/S26B/S26C CLFO_RS10260 c8f31c8e07beadb702ada9e745e84cd6 208 Pfam PF01726 LexA DNA binding domain 3 66 3.6E-26 T 25-04-2017 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CLFO_RS03240 81fec3758e557b7e79daf813eb5f82e9 356 Pfam PF01758 Sodium Bile acid symporter family 57 254 3.2E-45 T 25-04-2017 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CLFO_RS03240 81fec3758e557b7e79daf813eb5f82e9 356 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 12 342 4.9E-116 T 25-04-2017 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CLFO_RS03240 81fec3758e557b7e79daf813eb5f82e9 356 PIRSF PIRSF005508 1 356 7.1E-131 T 25-04-2017 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CLFO_RS03935 590b29c9aece0d7fd7ced9b3f0e67d02 400 SUPERFAMILY SSF53383 13 395 5.45E-130 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS03935 590b29c9aece0d7fd7ced9b3f0e67d02 400 Pfam PF00202 Aminotransferase class-III 17 392 2.6E-123 T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS03935 590b29c9aece0d7fd7ced9b3f0e67d02 400 Gene3D G3DSA:3.90.1150.10 287 396 5.1E-38 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS03935 590b29c9aece0d7fd7ced9b3f0e67d02 400 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 394 45.755 T 25-04-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CLFO_RS03935 590b29c9aece0d7fd7ced9b3f0e67d02 400 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS03935 590b29c9aece0d7fd7ced9b3f0e67d02 400 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 393 2.4E-159 T 25-04-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CLFO_RS03935 590b29c9aece0d7fd7ced9b3f0e67d02 400 Gene3D G3DSA:3.40.640.10 57 286 4.8E-93 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS00800 9acacffb98963a1752bf4e2644e99e6f 309 SUPERFAMILY SSF53448 3 180 3.25E-37 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00800 9acacffb98963a1752bf4e2644e99e6f 309 Gene3D G3DSA:3.90.550.10 2 144 2.3E-28 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00800 9acacffb98963a1752bf4e2644e99e6f 309 Pfam PF00535 Glycosyl transferase family 2 7 167 1.9E-34 T 25-04-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLFO_RS16065 a42d926752ce0387c8eddcd7471df2ab 619 ProSitePatterns PS01229 Hypothetical cof family signature 2. 497 519 - T 25-04-2017 CLFO_RS16065 a42d926752ce0387c8eddcd7471df2ab 619 Pfam PF00122 E1-E2 ATPase 226 391 6.7E-13 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS16065 a42d926752ce0387c8eddcd7471df2ab 619 Gene3D G3DSA:2.70.150.10 210 300 1.1E-5 T 25-04-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 CLFO_RS16065 a42d926752ce0387c8eddcd7471df2ab 619 Pfam PF00702 haloacid dehalogenase-like hydrolase 416 511 1.2E-14 T 25-04-2017 CLFO_RS16065 a42d926752ce0387c8eddcd7471df2ab 619 SUPERFAMILY SSF56784 399 594 1.29E-28 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS16065 a42d926752ce0387c8eddcd7471df2ab 619 SUPERFAMILY SSF81653 225 302 7.59E-9 T 25-04-2017 CLFO_RS16065 a42d926752ce0387c8eddcd7471df2ab 619 Gene3D G3DSA:3.40.50.1000 385 544 6.7E-29 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS16065 a42d926752ce0387c8eddcd7471df2ab 619 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 425 574 6.3E-26 T 25-04-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CLFO_RS13165 439cb99deafa0c95af2c910916370ecb 604 SUPERFAMILY SSF48334 128 182 3.92E-11 T 25-04-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLFO_RS13165 439cb99deafa0c95af2c910916370ecb 604 Pfam PF00488 MutS domain V 427 598 5.4E-28 T 25-04-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS13165 439cb99deafa0c95af2c910916370ecb 604 Pfam PF05192 MutS domain III 126 219 4.5E-10 T 25-04-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLFO_RS13165 439cb99deafa0c95af2c910916370ecb 604 Gene3D G3DSA:3.40.50.300 387 599 4.3E-45 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13165 439cb99deafa0c95af2c910916370ecb 604 SMART SM00534 423 603 5.6E-12 T 25-04-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS13165 439cb99deafa0c95af2c910916370ecb 604 SUPERFAMILY SSF52540 386 599 5.83E-34 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13165 439cb99deafa0c95af2c910916370ecb 604 Gene3D G3DSA:1.10.1420.10 127 182 5.4E-11 T 25-04-2017 CLFO_RS08480 833cf1b0d62284eeb22cf68187791a68 209 SUPERFAMILY SSF63848 102 206 1.44E-33 T 25-04-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CLFO_RS08480 833cf1b0d62284eeb22cf68187791a68 209 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 7 205 3.3E-33 T 25-04-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CLFO_RS08480 833cf1b0d62284eeb22cf68187791a68 209 Gene3D G3DSA:2.160.20.70 88 206 1.1E-40 T 25-04-2017 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 CLFO_RS08480 833cf1b0d62284eeb22cf68187791a68 209 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 6 207 22.108 T 25-04-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CLFO_RS08480 833cf1b0d62284eeb22cf68187791a68 209 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 104 203 9.3E-33 T 25-04-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CLFO_RS11190 dfe3f6a79ad2edc35d89d60cc86b39ef 117 SUPERFAMILY SSF52980 8 104 1.29E-23 T 25-04-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLFO_RS11190 dfe3f6a79ad2edc35d89d60cc86b39ef 117 Gene3D G3DSA:3.40.1350.10 8 117 1.2E-32 T 25-04-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 CLFO_RS11190 dfe3f6a79ad2edc35d89d60cc86b39ef 117 Pfam PF02021 Uncharacterised protein family UPF0102 9 99 1.1E-25 T 25-04-2017 IPR003509 Uncharacterised protein family UPF0102 CLFO_RS11190 dfe3f6a79ad2edc35d89d60cc86b39ef 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 3 113 1.1E-23 T 25-04-2017 IPR003509 Uncharacterised protein family UPF0102 CLFO_RS11190 dfe3f6a79ad2edc35d89d60cc86b39ef 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 2 112 21.788 T 25-04-2017 IPR003509 Uncharacterised protein family UPF0102 CLFO_RS14925 e3c7fb1b7ffeba2b9831c0e412582100 574 SUPERFAMILY SSF143975 8 381 1.83E-114 T 25-04-2017 CLFO_RS14925 e3c7fb1b7ffeba2b9831c0e412582100 574 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 25-04-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS14925 e3c7fb1b7ffeba2b9831c0e412582100 574 SUPERFAMILY SSF52016 387 572 9.42E-52 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS14925 e3c7fb1b7ffeba2b9831c0e412582100 574 Pfam PF00920 Dehydratase family 34 572 6.2E-174 T 25-04-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS14925 e3c7fb1b7ffeba2b9831c0e412582100 574 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 474 485 - T 25-04-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS01780 e5c2c90dc65d446c471e91e0d151ee77 205 PIRSF PIRSF037778 14 205 2.6E-48 T 25-04-2017 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 CLFO_RS01780 e5c2c90dc65d446c471e91e0d151ee77 205 Pfam PF12822 Protein of unknown function (DUF3816) 20 196 1.1E-24 T 25-04-2017 IPR024529 ECF transporter, substrate-specific component GO:0005215 CLFO_RS15065 5e8e954ff9a133e27e89ab46104d61ea 464 Pfam PF12704 MacB-like periplasmic core domain 14 190 2.3E-10 T 25-04-2017 IPR025857 MacB-like periplasmic core domain CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 26 421 1.5E-109 T 25-04-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 76 91 - T 25-04-2017 IPR031157 Tr-type G domain, conserved site CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 SUPERFAMILY SSF50465 330 430 2.16E-18 T 25-04-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 Gene3D G3DSA:3.40.50.300 447 567 9.6E-10 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 SUPERFAMILY SSF52540 20 252 3.0E-56 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 SUPERFAMILY SSF50447 235 321 5.41E-16 T 25-04-2017 IPR009000 Translation protein, beta-barrel domain CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 Pfam PF00009 Elongation factor Tu GTP binding domain 22 219 2.4E-46 T 25-04-2017 CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 Gene3D G3DSA:2.40.30.10 358 430 2.3E-6 T 25-04-2017 CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 23 206 7.5E-14 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 Gene3D G3DSA:2.40.30.10 235 357 1.3E-21 T 25-04-2017 CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 Gene3D G3DSA:3.40.50.300 13 227 4.4E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 PRINTS PR00315 GTP-binding elongation factor signature 83 91 3.5E-18 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 PRINTS PR00315 GTP-binding elongation factor signature 103 113 3.5E-18 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 PRINTS PR00315 GTP-binding elongation factor signature 25 38 3.5E-18 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 PRINTS PR00315 GTP-binding elongation factor signature 156 165 3.5E-18 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS06540 d3134546c024b6f116a3fb7cf10ecc52 608 PRINTS PR00315 GTP-binding elongation factor signature 119 130 3.5E-18 T 25-04-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CLFO_RS11025 96a05ce893581a047ead53a471e15091 384 SMART SM00962 189 380 1.3E-66 T 25-04-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS11025 96a05ce893581a047ead53a471e15091 384 Gene3D G3DSA:3.40.50.300 202 379 5.5E-50 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11025 96a05ce893581a047ead53a471e15091 384 Pfam PF00448 SRP54-type protein, GTPase domain 191 378 4.9E-45 T 25-04-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CLFO_RS11025 96a05ce893581a047ead53a471e15091 384 Gene3D G3DSA:1.20.120.140 155 201 1.4E-7 T 25-04-2017 CLFO_RS11025 96a05ce893581a047ead53a471e15091 384 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 276 9.7E-70 T 25-04-2017 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CLFO_RS11025 96a05ce893581a047ead53a471e15091 384 SMART SM00382 188 330 2.2E-8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS11025 96a05ce893581a047ead53a471e15091 384 SUPERFAMILY SSF52540 188 379 5.31E-37 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03780 471e2bcc72d997fa065f7aef1283dfdd 368 Pfam PF07470 Glycosyl Hydrolase Family 88 15 354 5.5E-95 T 25-04-2017 IPR010905 Glycosyl hydrolase, family 88 CLFO_RS03780 471e2bcc72d997fa065f7aef1283dfdd 368 Gene3D G3DSA:1.50.10.10 13 359 9.2E-119 T 25-04-2017 IPR012341 Six-hairpin glycosidase GO:0003824 CLFO_RS03780 471e2bcc72d997fa065f7aef1283dfdd 368 SUPERFAMILY SSF48208 15 356 1.3E-66 T 25-04-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 CLFO_RS04965 e1633952712a6703ddff9ebca771ed30 253 SMART SM01134 73 234 8.1E-64 T 25-04-2017 CLFO_RS04965 e1633952712a6703ddff9ebca771ed30 253 SUPERFAMILY SSF100950 74 234 7.18E-31 T 25-04-2017 CLFO_RS04965 e1633952712a6703ddff9ebca771ed30 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.7E-10 T 25-04-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLFO_RS04965 e1633952712a6703ddff9ebca771ed30 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.7E-10 T 25-04-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLFO_RS04965 e1633952712a6703ddff9ebca771ed30 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 6.6E-21 T 25-04-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLFO_RS04965 e1633952712a6703ddff9ebca771ed30 253 SMART SM00420 6 58 3.4E-23 T 25-04-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CLFO_RS04965 e1633952712a6703ddff9ebca771ed30 253 SUPERFAMILY SSF46785 5 63 7.94E-15 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS04965 e1633952712a6703ddff9ebca771ed30 253 Gene3D G3DSA:1.10.10.10 2 60 2.0E-11 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS04965 e1633952712a6703ddff9ebca771ed30 253 Gene3D G3DSA:3.40.50.1360 77 221 3.7E-11 T 25-04-2017 CLFO_RS04965 e1633952712a6703ddff9ebca771ed30 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 25-04-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLFO_RS04965 e1633952712a6703ddff9ebca771ed30 253 Pfam PF00455 DeoR C terminal sensor domain 75 233 6.6E-50 T 25-04-2017 IPR014036 DeoR C-terminal sensor domain CLFO_RS11560 b3d09a6a84b1c3ec6b953231813cec41 390 Pfam PF01420 Type I restriction modification DNA specificity domain 1 182 7.2E-21 T 25-04-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CLFO_RS11560 b3d09a6a84b1c3ec6b953231813cec41 390 Pfam PF01420 Type I restriction modification DNA specificity domain 203 374 2.8E-17 T 25-04-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CLFO_RS11560 b3d09a6a84b1c3ec6b953231813cec41 390 SUPERFAMILY SSF116734 3 195 1.46E-44 T 25-04-2017 CLFO_RS11560 b3d09a6a84b1c3ec6b953231813cec41 390 SUPERFAMILY SSF116734 203 389 8.18E-36 T 25-04-2017 CLFO_RS16370 08f8702c49d14443f495b307edd66a37 491 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 18 460 1.3E-121 T 25-04-2017 IPR003846 Uncharacterised protein family UPF0061 CLFO_RS16370 08f8702c49d14443f495b307edd66a37 491 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 10 477 45.969 T 25-04-2017 IPR003846 Uncharacterised protein family UPF0061 CLFO_RS17615 95fd1067d63adaf8b1384ff7e0d0d130 261 Gene3D G3DSA:3.10.20.10 27 109 2.4E-20 T 25-04-2017 CLFO_RS17615 95fd1067d63adaf8b1384ff7e0d0d130 261 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 1 259 31.34 T 25-04-2017 IPR003786 Protein FdhD GO:0016783 CLFO_RS17615 95fd1067d63adaf8b1384ff7e0d0d130 261 PIRSF PIRSF015626 2 260 5.5E-82 T 25-04-2017 IPR003786 Protein FdhD GO:0016783 CLFO_RS17615 95fd1067d63adaf8b1384ff7e0d0d130 261 SUPERFAMILY SSF53927 4 256 5.41E-75 T 25-04-2017 IPR016193 Cytidine deaminase-like GO:0003824 CLFO_RS17615 95fd1067d63adaf8b1384ff7e0d0d130 261 Gene3D G3DSA:3.40.140.10 125 258 1.9E-51 T 25-04-2017 CLFO_RS17615 95fd1067d63adaf8b1384ff7e0d0d130 261 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 21 257 6.0E-63 T 25-04-2017 IPR003786 Protein FdhD GO:0016783 CLFO_RS17615 95fd1067d63adaf8b1384ff7e0d0d130 261 Pfam PF02634 FdhD/NarQ family 25 258 9.2E-77 T 25-04-2017 IPR003786 Protein FdhD GO:0016783 CLFO_RS08840 a72c0f69f406d35138015a44d5e4a941 877 Pfam PF10651 Domain of unknown function (DUF2479) 17 141 1.7E-12 T 25-04-2017 IPR018913 Domain of unknown function DUF2479 CLFO_RS16905 c226b4c9f3e93a167aa9a7dc8a579c33 290 SUPERFAMILY SSF102114 16 213 1.96E-10 T 25-04-2017 CLFO_RS16905 c226b4c9f3e93a167aa9a7dc8a579c33 290 Gene3D G3DSA:3.20.20.70 17 198 6.4E-7 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS16905 c226b4c9f3e93a167aa9a7dc8a579c33 290 Pfam PF04055 Radical SAM superfamily 17 182 1.3E-10 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS02330 c13c4633c93a39f2bde664458590315b 226 Pfam PF07314 Protein of unknown function (DUF1461) 9 193 2.6E-47 T 25-04-2017 IPR010178 Integral membrane protein 1906 CLFO_RS02330 c13c4633c93a39f2bde664458590315b 226 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 2 220 2.8E-29 T 25-04-2017 IPR010178 Integral membrane protein 1906 CLFO_RS15000 1576e94b18ec2569afeb05859674ff2b 368 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 208 7.0E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15000 1576e94b18ec2569afeb05859674ff2b 368 Gene3D G3DSA:3.30.565.10 200 365 1.9E-35 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15000 1576e94b18ec2569afeb05859674ff2b 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 322 2.9E-10 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15000 1576e94b18ec2569afeb05859674ff2b 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 347 2.9E-10 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15000 1576e94b18ec2569afeb05859674ff2b 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 365 2.9E-10 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS15000 1576e94b18ec2569afeb05859674ff2b 368 SUPERFAMILY SSF55874 201 365 1.57E-35 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15000 1576e94b18ec2569afeb05859674ff2b 368 SUPERFAMILY SSF47384 134 210 5.1E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15000 1576e94b18ec2569afeb05859674ff2b 368 SMART SM00387 257 368 3.0E-25 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15000 1576e94b18ec2569afeb05859674ff2b 368 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 257 355 1.7E-16 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS15000 1576e94b18ec2569afeb05859674ff2b 368 Gene3D G3DSA:1.10.287.130 139 199 8.5E-15 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS15000 1576e94b18ec2569afeb05859674ff2b 368 SMART SM00388 145 212 2.3E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS04915 5e44549e9a6f82e8f08f396b11b28c4d 236 SUPERFAMILY SSF52540 3 229 1.28E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04915 5e44549e9a6f82e8f08f396b11b28c4d 236 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS04915 5e44549e9a6f82e8f08f396b11b28c4d 236 Gene3D G3DSA:3.40.50.300 3 230 9.8E-68 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04915 5e44549e9a6f82e8f08f396b11b28c4d 236 SMART SM00382 27 215 4.3E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04915 5e44549e9a6f82e8f08f396b11b28c4d 236 Pfam PF00005 ABC transporter 23 158 8.1E-31 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS11745 719102c45ffdae9ceb0f20ea3695038d 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 322 399 5.0E-14 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS11745 719102c45ffdae9ceb0f20ea3695038d 461 Gene3D G3DSA:3.90.190.20 320 459 1.0E-42 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS11745 719102c45ffdae9ceb0f20ea3695038d 461 SUPERFAMILY SSF53244 322 457 9.94E-36 T 25-04-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CLFO_RS11745 719102c45ffdae9ceb0f20ea3695038d 461 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 458 32.757 T 25-04-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS11745 719102c45ffdae9ceb0f20ea3695038d 461 SUPERFAMILY SSF63418 2 104 3.01E-22 T 25-04-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLFO_RS11745 719102c45ffdae9ceb0f20ea3695038d 461 Pfam PF08245 Mur ligase middle domain 113 300 1.8E-48 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS11745 719102c45ffdae9ceb0f20ea3695038d 461 Pfam PF01225 Mur ligase family, catalytic domain 26 102 1.9E-10 T 25-04-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLFO_RS11745 719102c45ffdae9ceb0f20ea3695038d 461 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 457 4.6E-126 T 25-04-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS11745 719102c45ffdae9ceb0f20ea3695038d 461 SUPERFAMILY SSF53623 107 319 3.27E-54 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS11745 719102c45ffdae9ceb0f20ea3695038d 461 Gene3D G3DSA:3.40.1390.10 10 97 1.5E-20 T 25-04-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CLFO_RS11745 719102c45ffdae9ceb0f20ea3695038d 461 Gene3D G3DSA:3.40.1190.10 98 318 8.0E-65 T 25-04-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CLFO_RS03765 2e112e5a1bc078f3444b565f07570c7e 431 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 425 2.0E-130 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS03765 2e112e5a1bc078f3444b565f07570c7e 431 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 420 9.9E-118 T 25-04-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLFO_RS03765 2e112e5a1bc078f3444b565f07570c7e 431 PIRSF PIRSF006066 6 431 2.0E-159 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS07810 e6b8bbc432e7b3cc2b0f64839ce357e3 223 Pfam PF00543 Nitrogen regulatory protein P-II 129 220 7.0E-6 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS07810 e6b8bbc432e7b3cc2b0f64839ce357e3 223 SMART SM00938 129 222 7.0E-4 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS07810 e6b8bbc432e7b3cc2b0f64839ce357e3 223 Gene3D G3DSA:3.30.70.120 127 220 1.1E-9 T 25-04-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLFO_RS07810 e6b8bbc432e7b3cc2b0f64839ce357e3 223 SUPERFAMILY SSF54913 10 105 1.18E-12 T 25-04-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLFO_RS07810 e6b8bbc432e7b3cc2b0f64839ce357e3 223 SUPERFAMILY SSF54913 126 221 1.21E-17 T 25-04-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLFO_RS09025 ab20fe428490bfe36d985a41eb65c31e 254 SUPERFAMILY SSF69572 5 249 1.57E-59 T 25-04-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLFO_RS09025 ab20fe428490bfe36d985a41eb65c31e 254 Pfam PF00899 ThiF family 8 245 1.5E-37 T 25-04-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLFO_RS09025 ab20fe428490bfe36d985a41eb65c31e 254 Gene3D G3DSA:3.40.50.720 6 247 3.3E-45 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS06820 cf5aadd14f29079e3fb35fe4dee76257 457 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 88 2.4E-33 T 25-04-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 CLFO_RS06820 cf5aadd14f29079e3fb35fe4dee76257 457 Gene3D G3DSA:3.40.50.2300 1 99 5.0E-41 T 25-04-2017 CLFO_RS06820 cf5aadd14f29079e3fb35fe4dee76257 457 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 95 1.2E-15 T 25-04-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLFO_RS06820 cf5aadd14f29079e3fb35fe4dee76257 457 Pfam PF02378 Phosphotransferase system, EIIC 131 395 4.9E-21 T 25-04-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLFO_RS06820 cf5aadd14f29079e3fb35fe4dee76257 457 SUPERFAMILY SSF52794 3 99 4.71E-36 T 25-04-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CLFO_RS06820 cf5aadd14f29079e3fb35fe4dee76257 457 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 116 451 1.2E-139 T 25-04-2017 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CLFO_RS07500 3a520e7943bd2be19c83c8f3a8022c6b 95 Pfam PF16079 Phage holin family Hol44, in holin superfamily V 25 79 1.0E-8 T 25-04-2017 IPR032111 Clostridium phage holin CLFO_RS17390 3f0a822555e33a04f25aa997b6e40f22 164 Pfam PF12687 Protein of unknown function (DUF3801) 33 152 6.7E-10 T 25-04-2017 IPR024234 Protein of unknown function DUF3801 CLFO_RS16780 24937b1156d6b9ae9305977bc39bfc09 424 SUPERFAMILY SSF103473 7 419 3.4E-47 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS16780 24937b1156d6b9ae9305977bc39bfc09 424 Pfam PF07690 Major Facilitator Superfamily 18 379 4.0E-32 T 25-04-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLFO_RS16780 24937b1156d6b9ae9305977bc39bfc09 424 Gene3D G3DSA:1.20.1250.20 226 416 5.5E-17 T 25-04-2017 CLFO_RS16780 24937b1156d6b9ae9305977bc39bfc09 424 Gene3D G3DSA:1.20.1250.20 11 195 2.1E-23 T 25-04-2017 CLFO_RS16565 7fab8b6d9d8c737ef4fe6b8b6af558d6 98 SMART SM00877 7 83 6.5E-30 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS16565 7fab8b6d9d8c737ef4fe6b8b6af558d6 98 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 6 53 5.0E-18 T 25-04-2017 CLFO_RS16565 7fab8b6d9d8c737ef4fe6b8b6af558d6 98 SUPERFAMILY SSF143414 7 93 3.4E-25 T 25-04-2017 CLFO_RS16565 7fab8b6d9d8c737ef4fe6b8b6af558d6 98 Pfam PF00936 BMC domain 8 83 3.4E-25 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS08925 1b77c3701198558a1c776f9160761333 560 Pfam PF08486 Stage II sporulation protein 241 330 1.9E-25 T 25-04-2017 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal CLFO_RS08925 1b77c3701198558a1c776f9160761333 560 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 245 559 7.7E-78 T 25-04-2017 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 CLFO_RS17220 6cf063d619fdef87a75238b10c1ce83f 130 Gene3D G3DSA:1.10.260.40 2 73 3.2E-24 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS17220 6cf063d619fdef87a75238b10c1ce83f 130 SUPERFAMILY SSF47413 2 67 6.14E-19 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS17220 6cf063d619fdef87a75238b10c1ce83f 130 SMART SM00530 6 61 2.6E-14 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS17220 6cf063d619fdef87a75238b10c1ce83f 130 Pfam PF01381 Helix-turn-helix 7 60 5.1E-15 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS18240 d109e34e30f0e0222421ccd2522444bf 169 SUPERFAMILY SSF88946 4 88 2.28E-22 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS18240 d109e34e30f0e0222421ccd2522444bf 169 SUPERFAMILY SSF88659 95 163 3.55E-13 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS18240 d109e34e30f0e0222421ccd2522444bf 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 160 7.7E-27 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS18240 d109e34e30f0e0222421ccd2522444bf 169 Pfam PF04542 Sigma-70 region 2 8 75 4.9E-17 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS18240 d109e34e30f0e0222421ccd2522444bf 169 Pfam PF08281 Sigma-70, region 4 107 156 3.8E-12 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS18240 d109e34e30f0e0222421ccd2522444bf 169 Gene3D G3DSA:1.10.10.10 100 164 4.9E-17 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18240 d109e34e30f0e0222421ccd2522444bf 169 Gene3D G3DSA:1.10.1740.10 3 93 1.3E-25 T 25-04-2017 CLFO_RS14810 f84dcbb0583adddac1a88192633fd2b2 385 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 182 380 4.3E-9 T 25-04-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CLFO_RS14810 f84dcbb0583adddac1a88192633fd2b2 385 Gene3D G3DSA:3.20.20.210 148 383 6.4E-21 T 25-04-2017 CLFO_RS14810 f84dcbb0583adddac1a88192633fd2b2 385 Gene3D G3DSA:3.20.20.210 8 115 6.4E-21 T 25-04-2017 CLFO_RS14810 f84dcbb0583adddac1a88192633fd2b2 385 SUPERFAMILY SSF51726 11 144 3.84E-40 T 25-04-2017 CLFO_RS14810 f84dcbb0583adddac1a88192633fd2b2 385 SUPERFAMILY SSF51726 184 385 3.84E-40 T 25-04-2017 CLFO_RS15965 a1f900a83cdcf66729d7421690f9aa64 338 Gene3D G3DSA:3.40.50.2300 55 175 1.8E-50 T 25-04-2017 CLFO_RS15965 a1f900a83cdcf66729d7421690f9aa64 338 Pfam PF13377 Periplasmic binding protein-like domain 172 334 1.9E-32 T 25-04-2017 CLFO_RS15965 a1f900a83cdcf66729d7421690f9aa64 338 Gene3D G3DSA:3.40.50.2300 176 315 8.0E-46 T 25-04-2017 CLFO_RS15965 a1f900a83cdcf66729d7421690f9aa64 338 Gene3D G3DSA:1.10.260.40 3 54 9.8E-25 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS15965 a1f900a83cdcf66729d7421690f9aa64 338 SMART SM00354 2 72 9.9E-37 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS15965 a1f900a83cdcf66729d7421690f9aa64 338 SUPERFAMILY SSF53822 61 335 5.3E-83 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS15965 a1f900a83cdcf66729d7421690f9aa64 338 SUPERFAMILY SSF47413 3 60 1.5E-17 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS15965 a1f900a83cdcf66729d7421690f9aa64 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 25-04-2017 CLFO_RS15965 a1f900a83cdcf66729d7421690f9aa64 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 5.3E-6 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS15965 a1f900a83cdcf66729d7421690f9aa64 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 5.3E-6 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS15965 a1f900a83cdcf66729d7421690f9aa64 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.2E-20 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS04355 7d0bc4632bbe51d2394de2605bdf9483 368 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 13 363 4.2E-122 T 25-04-2017 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CLFO_RS04355 7d0bc4632bbe51d2394de2605bdf9483 368 Pfam PF01098 Cell cycle protein 15 363 5.7E-98 T 25-04-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CLFO_RS10115 b599c78d6a1bee9e6dc37c31cc68fc58 226 SMART SM00382 34 221 1.1E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS10115 b599c78d6a1bee9e6dc37c31cc68fc58 226 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS10115 b599c78d6a1bee9e6dc37c31cc68fc58 226 SUPERFAMILY SSF52540 5 224 5.32E-74 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10115 b599c78d6a1bee9e6dc37c31cc68fc58 226 Gene3D G3DSA:3.40.50.300 3 223 1.5E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10115 b599c78d6a1bee9e6dc37c31cc68fc58 226 Pfam PF00005 ABC transporter 25 173 5.9E-32 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS03165 45a58dec30d76ee5d3a71d94abf1cffa 553 SUPERFAMILY SSF51338 503 542 4.63E-22 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS03165 45a58dec30d76ee5d3a71d94abf1cffa 553 SUPERFAMILY SSF51338 1 60 4.63E-22 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS03165 45a58dec30d76ee5d3a71d94abf1cffa 553 SUPERFAMILY SSF51556 198 504 2.95E-29 T 25-04-2017 IPR032466 Metal-dependent hydrolase CLFO_RS03165 45a58dec30d76ee5d3a71d94abf1cffa 553 SUPERFAMILY SSF51556 59 122 2.95E-29 T 25-04-2017 IPR032466 Metal-dependent hydrolase CLFO_RS03165 45a58dec30d76ee5d3a71d94abf1cffa 553 Gene3D G3DSA:2.30.40.10 487 539 1.3E-4 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS03165 45a58dec30d76ee5d3a71d94abf1cffa 553 Pfam PF07969 Amidohydrolase family 48 542 4.9E-101 T 25-04-2017 IPR013108 Amidohydrolase 3 CLFO_RS03165 45a58dec30d76ee5d3a71d94abf1cffa 553 Gene3D G3DSA:2.30.40.10 204 224 8.1E-19 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS03165 45a58dec30d76ee5d3a71d94abf1cffa 553 Gene3D G3DSA:2.30.40.10 1 80 8.1E-19 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS03165 45a58dec30d76ee5d3a71d94abf1cffa 553 Gene3D G3DSA:3.20.20.140 287 486 2.3E-22 T 25-04-2017 CLFO_RS09415 50a4f3685118aa7b699cecfd147071c3 227 SUPERFAMILY SSF48295 38 108 3.56E-15 T 25-04-2017 IPR010921 Trp repressor/replication initiator GO:0043565 CLFO_RS09415 50a4f3685118aa7b699cecfd147071c3 227 Pfam PF13518 Helix-turn-helix domain 132 182 2.9E-12 T 25-04-2017 CLFO_RS09415 50a4f3685118aa7b699cecfd147071c3 227 Pfam PF13518 Helix-turn-helix domain 12 57 1.8E-6 T 25-04-2017 CLFO_RS09415 50a4f3685118aa7b699cecfd147071c3 227 Gene3D G3DSA:1.10.10.60 9 54 6.1E-10 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09415 50a4f3685118aa7b699cecfd147071c3 227 Gene3D G3DSA:1.10.10.60 65 119 1.2E-7 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09415 50a4f3685118aa7b699cecfd147071c3 227 Gene3D G3DSA:1.10.10.60 131 219 2.5E-11 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS09415 50a4f3685118aa7b699cecfd147071c3 227 SUPERFAMILY SSF48295 121 185 1.31E-16 T 25-04-2017 IPR010921 Trp repressor/replication initiator GO:0043565 CLFO_RS09415 50a4f3685118aa7b699cecfd147071c3 227 SUPERFAMILY SSF48295 3 55 5.13E-9 T 25-04-2017 IPR010921 Trp repressor/replication initiator GO:0043565 CLFO_RS08875 974d08e3c7f41d3efbb8b402104b0f57 78 Pfam PF01381 Helix-turn-helix 5 58 1.7E-14 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS08875 974d08e3c7f41d3efbb8b402104b0f57 78 Gene3D G3DSA:1.10.260.40 1 64 2.8E-22 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS08875 974d08e3c7f41d3efbb8b402104b0f57 78 SUPERFAMILY SSF47413 2 63 4.56E-17 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS08875 974d08e3c7f41d3efbb8b402104b0f57 78 SMART SM00530 4 59 1.1E-13 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS02275 8904cd3753eb70dc31f03bd752023561 266 Pfam PF00290 Tryptophan synthase alpha chain 9 261 2.0E-95 T 25-04-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLFO_RS02275 8904cd3753eb70dc31f03bd752023561 266 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 15 262 36.13 T 25-04-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLFO_RS02275 8904cd3753eb70dc31f03bd752023561 266 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 49 62 - T 25-04-2017 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLFO_RS02275 8904cd3753eb70dc31f03bd752023561 266 SUPERFAMILY SSF51366 3 248 1.13E-87 T 25-04-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLFO_RS02275 8904cd3753eb70dc31f03bd752023561 266 Gene3D G3DSA:3.20.20.70 3 262 1.5E-103 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS02275 8904cd3753eb70dc31f03bd752023561 266 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 259 6.7E-87 T 25-04-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CLFO_RS10855 6b3b8c926c679e4e8038bc314012ba35 87 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 87 1.5E-42 T 25-04-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS10855 6b3b8c926c679e4e8038bc314012ba35 87 ProSitePatterns PS00362 Ribosomal protein S15 signature. 37 67 - T 25-04-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS10855 6b3b8c926c679e4e8038bc314012ba35 87 Gene3D G3DSA:1.10.287.10 2 87 1.4E-40 T 25-04-2017 IPR009068 S15/NS1, RNA-binding CLFO_RS10855 6b3b8c926c679e4e8038bc314012ba35 87 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 9 86 2.0E-31 T 25-04-2017 CLFO_RS10855 6b3b8c926c679e4e8038bc314012ba35 87 SMART SM01387 6 86 2.1E-54 T 25-04-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS10855 6b3b8c926c679e4e8038bc314012ba35 87 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 87 23.51 T 25-04-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS10855 6b3b8c926c679e4e8038bc314012ba35 87 Pfam PF00312 Ribosomal protein S15 6 86 2.6E-38 T 25-04-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS10855 6b3b8c926c679e4e8038bc314012ba35 87 SUPERFAMILY SSF47060 3 87 7.06E-37 T 25-04-2017 IPR009068 S15/NS1, RNA-binding CLFO_RS19610 0dd44c8d4960d5c4257f496bdd9db620 147 Gene3D G3DSA:3.100.10.10 32 147 5.8E-39 T 25-04-2017 CLFO_RS19610 0dd44c8d4960d5c4257f496bdd9db620 147 SUPERFAMILY SSF52080 4 145 5.1E-48 T 25-04-2017 IPR021131 Ribosomal protein L18e/L15P CLFO_RS19610 0dd44c8d4960d5c4257f496bdd9db620 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 145 7.8E-38 T 25-04-2017 IPR021131 Ribosomal protein L18e/L15P CLFO_RS19610 0dd44c8d4960d5c4257f496bdd9db620 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 147 22.475 T 25-04-2017 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CLFO_RS19610 0dd44c8d4960d5c4257f496bdd9db620 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 145 8.9E-51 T 25-04-2017 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19610 0dd44c8d4960d5c4257f496bdd9db620 147 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 25-04-2017 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS11395 027ba3b4ad36b69a470fe48802277922 228 Pfam PF04298 Putative neutral zinc metallopeptidase 9 223 4.4E-90 T 25-04-2017 IPR007395 Putative neutral zinc metallopeptidase CLFO_RS14120 4182f33df611d954f6871c5acb39fa29 375 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 7 72 2.9E-7 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS14120 4182f33df611d954f6871c5acb39fa29 375 SUPERFAMILY SSF48310 53 372 8.37E-79 T 25-04-2017 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS14120 4182f33df611d954f6871c5acb39fa29 375 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 51 369 7.2E-91 T 25-04-2017 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS14120 4182f33df611d954f6871c5acb39fa29 375 Gene3D G3DSA:3.60.9.10 6 70 1.0E-6 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS14120 4182f33df611d954f6871c5acb39fa29 375 SUPERFAMILY SSF56228 7 63 3.27E-5 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS14120 4182f33df611d954f6871c5acb39fa29 375 Gene3D G3DSA:1.10.599.10 136 371 3.5E-53 T 25-04-2017 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 CLFO_RS18860 ec4f647ac7c0fdd24486c4ad1fe6161d 248 SUPERFAMILY SSF52518 14 242 1.56E-59 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS18860 ec4f647ac7c0fdd24486c4ad1fe6161d 248 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 209 1.2E-23 T 25-04-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLFO_RS18860 ec4f647ac7c0fdd24486c4ad1fe6161d 248 Gene3D G3DSA:3.40.50.970 16 229 2.1E-59 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS17940 89cd9b5bc6605821ecd4a91fde642d55 141 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 5 130 3.8E-28 T 25-04-2017 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CLFO_RS08790 e7826502b98815759090623b8fea9df3 376 SUPERFAMILY SSF56563 104 374 1.7E-38 T 25-04-2017 CLFO_RS08790 e7826502b98815759090623b8fea9df3 376 Pfam PF05065 Phage capsid family 111 366 1.0E-26 T 25-04-2017 IPR024455 Phage capsid CLFO_RS08790 e7826502b98815759090623b8fea9df3 376 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 370 4.9E-67 T 25-04-2017 IPR006444 Phage major capsid protein, HK97 CLFO_RS11035 bf40639ad3face40e882c7df9dc03ddd 361 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 12 360 1.5E-125 T 25-04-2017 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CLFO_RS11035 bf40639ad3face40e882c7df9dc03ddd 361 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 354 6.5E-131 T 25-04-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLFO_RS11035 bf40639ad3face40e882c7df9dc03ddd 361 SUPERFAMILY SSF160544 251 358 1.26E-42 T 25-04-2017 IPR029025 Type III secretion system substrate exporter, C-terminal CLFO_RS11035 bf40639ad3face40e882c7df9dc03ddd 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 309 330 1.2E-43 T 25-04-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLFO_RS11035 bf40639ad3face40e882c7df9dc03ddd 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 279 294 1.2E-43 T 25-04-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLFO_RS11035 bf40639ad3face40e882c7df9dc03ddd 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 235 252 1.2E-43 T 25-04-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLFO_RS11035 bf40639ad3face40e882c7df9dc03ddd 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 215 233 1.2E-43 T 25-04-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLFO_RS11035 bf40639ad3face40e882c7df9dc03ddd 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 15 37 1.2E-43 T 25-04-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CLFO_RS11035 bf40639ad3face40e882c7df9dc03ddd 361 Gene3D G3DSA:3.40.1690.10 225 359 9.6E-62 T 25-04-2017 IPR029025 Type III secretion system substrate exporter, C-terminal CLFO_RS10205 066617fe0c8358b43405a6091e2068be 137 SUPERFAMILY SSF140990 4 135 4.97E-10 T 25-04-2017 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 297 2.4E-36 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 Gene3D G3DSA:3.40.50.720 3 167 7.1E-31 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 Gene3D G3DSA:3.50.50.60 242 324 1.3E-15 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 SUPERFAMILY SSF51905 1 323 2.59E-45 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 Gene3D G3DSA:3.50.50.60 168 241 5.7E-12 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.9E-24 T 25-04-2017 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 2.9E-24 T 25-04-2017 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 2.9E-24 T 25-04-2017 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 263 2.9E-24 T 25-04-2017 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 2.9E-24 T 25-04-2017 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.5E-21 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 249 270 4.5E-21 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 118 4.5E-21 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 285 303 4.5E-21 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 205 221 4.5E-21 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 4.5E-21 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS03270 b70a943d8e17fa8715e14752050d86a2 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 4.5E-21 T 25-04-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CLFO_RS19870 c291be23a3f3fbbb1917f1473824ebd6 360 Pfam PF14520 Helix-hairpin-helix domain 295 348 3.8E-5 T 25-04-2017 CLFO_RS19870 c291be23a3f3fbbb1917f1473824ebd6 360 Gene3D G3DSA:3.40.1700.10 22 142 1.3E-30 T 25-04-2017 CLFO_RS19870 c291be23a3f3fbbb1917f1473824ebd6 360 Gene3D G3DSA:1.10.150.20 296 348 1.7E-9 T 25-04-2017 CLFO_RS19870 c291be23a3f3fbbb1917f1473824ebd6 360 SUPERFAMILY SSF143597 20 145 1.7E-29 T 25-04-2017 CLFO_RS19870 c291be23a3f3fbbb1917f1473824ebd6 360 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 2 357 44.057 T 25-04-2017 IPR023763 DNA integrity scanning protein, DisA CLFO_RS19870 c291be23a3f3fbbb1917f1473824ebd6 360 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 28 139 5.4E-26 T 25-04-2017 IPR003390 DNA integrity scanning protein, DisA, N-terminal CLFO_RS19870 c291be23a3f3fbbb1917f1473824ebd6 360 SUPERFAMILY SSF47781 281 355 8.15E-13 T 25-04-2017 IPR010994 RuvA domain 2-like CLFO_RS19870 c291be23a3f3fbbb1917f1473824ebd6 360 Pfam PF10635 DisA bacterial checkpoint controller linker region 145 284 2.0E-53 T 25-04-2017 IPR018906 DNA integrity scanning, DisA, linker region CLFO_RS17590 e70e34dfb75d7816f3a45407859bcb9d 288 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 284 40.296 T 25-04-2017 IPR005337 RapZ-like family GO:0005524 CLFO_RS17590 e70e34dfb75d7816f3a45407859bcb9d 288 Gene3D G3DSA:3.40.50.300 1 155 2.1E-21 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17590 e70e34dfb75d7816f3a45407859bcb9d 288 Pfam PF03668 P-loop ATPase protein family 1 281 5.2E-102 T 25-04-2017 IPR005337 RapZ-like family GO:0005524 CLFO_RS17590 e70e34dfb75d7816f3a45407859bcb9d 288 SUPERFAMILY SSF52540 1 155 4.63E-14 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17590 e70e34dfb75d7816f3a45407859bcb9d 288 PIRSF PIRSF005052 1 287 4.3E-106 T 25-04-2017 IPR005337 RapZ-like family GO:0005524 CLFO_RS20980 052642ef516ead4f54c5d1cbb30e89a9 291 Pfam PF09648 YycH protein 37 288 6.0E-31 T 25-04-2017 IPR018604 Regulatory protein YycH-like GO:0016021 CLFO_RS09480 59f6f02e5cec75f27258ee583e3f47f3 542 Gene3D G3DSA:3.10.105.10 301 511 6.3E-47 T 25-04-2017 CLFO_RS09480 59f6f02e5cec75f27258ee583e3f47f3 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 452 1.9E-78 T 25-04-2017 IPR000914 Solute-binding protein family 5 domain CLFO_RS09480 59f6f02e5cec75f27258ee583e3f47f3 542 SUPERFAMILY SSF53850 46 541 5.61E-107 T 25-04-2017 CLFO_RS09480 59f6f02e5cec75f27258ee583e3f47f3 542 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 46 539 3.4E-176 T 25-04-2017 IPR011980 Periplasmic nickel-binding protein GO:0015675|GO:0016151|GO:0020037 CLFO_RS09480 59f6f02e5cec75f27258ee583e3f47f3 542 PIRSF PIRSF002741 3 542 8.5E-90 T 25-04-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLFO_RS09480 59f6f02e5cec75f27258ee583e3f47f3 542 Gene3D G3DSA:3.90.76.10 85 164 1.9E-21 T 25-04-2017 CLFO_RS09480 59f6f02e5cec75f27258ee583e3f47f3 542 Gene3D G3DSA:3.40.190.10 165 300 8.1E-33 T 25-04-2017 CLFO_RS01415 d535af5e356fb714c93b323a5084e32a 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 189 0.004 T 25-04-2017 CLFO_RS01415 d535af5e356fb714c93b323a5084e32a 255 Gene3D G3DSA:3.40.50.720 2 253 6.2E-67 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01415 d535af5e356fb714c93b323a5084e32a 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 8.6E-51 T 25-04-2017 CLFO_RS01415 d535af5e356fb714c93b323a5084e32a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 7.9E-27 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01415 d535af5e356fb714c93b323a5084e32a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 7.9E-27 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01415 d535af5e356fb714c93b323a5084e32a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 7.9E-27 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01415 d535af5e356fb714c93b323a5084e32a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 7.9E-27 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01415 d535af5e356fb714c93b323a5084e32a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 7.9E-27 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01415 d535af5e356fb714c93b323a5084e32a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 7.9E-27 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS01415 d535af5e356fb714c93b323a5084e32a 255 SUPERFAMILY SSF51735 8 253 7.01E-65 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS02085 371b334325265f8a38f05a1557d87cc3 266 PIRSF PIRSF000090 1 265 1.4E-79 T 25-04-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 CLFO_RS02085 371b334325265f8a38f05a1557d87cc3 266 SMART SM00893 22 213 4.1E-54 T 25-04-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLFO_RS02085 371b334325265f8a38f05a1557d87cc3 266 Pfam PF01012 Electron transfer flavoprotein domain 23 208 1.0E-45 T 25-04-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CLFO_RS02085 371b334325265f8a38f05a1557d87cc3 266 Gene3D G3DSA:3.40.50.620 1 263 1.8E-81 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS02085 371b334325265f8a38f05a1557d87cc3 266 SUPERFAMILY SSF52402 1 260 1.26E-70 T 25-04-2017 CLFO_RS18175 f4b3784c21d8084ac6ed3e6fafb6ca02 186 Gene3D G3DSA:1.20.1260.10 2 140 1.1E-38 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS18175 f4b3784c21d8084ac6ed3e6fafb6ca02 186 SUPERFAMILY SSF57802 152 184 1.05E-8 T 25-04-2017 CLFO_RS18175 f4b3784c21d8084ac6ed3e6fafb6ca02 186 Gene3D G3DSA:2.20.28.10 152 183 2.8E-10 T 25-04-2017 IPR004039 Rubredoxin-type fold CLFO_RS18175 f4b3784c21d8084ac6ed3e6fafb6ca02 186 Pfam PF02915 Rubrerythrin 10 138 2.7E-23 T 25-04-2017 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLFO_RS18175 f4b3784c21d8084ac6ed3e6fafb6ca02 186 SUPERFAMILY SSF47240 5 145 5.97E-34 T 25-04-2017 IPR009078 Ferritin-like superfamily CLFO_RS03075 fdbad96e04436a8afdb29d45c8ac3f5b 270 Gene3D G3DSA:3.40.50.720 3 158 2.9E-48 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03075 fdbad96e04436a8afdb29d45c8ac3f5b 270 PIRSF PIRSF000193 2 269 1.6E-87 T 25-04-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CLFO_RS03075 fdbad96e04436a8afdb29d45c8ac3f5b 270 SUPERFAMILY SSF51735 4 160 1.81E-36 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03075 fdbad96e04436a8afdb29d45c8ac3f5b 270 Gene3D G3DSA:1.10.3730.10 161 266 1.4E-45 T 25-04-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CLFO_RS03075 fdbad96e04436a8afdb29d45c8ac3f5b 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 6.5E-20 T 25-04-2017 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CLFO_RS03075 fdbad96e04436a8afdb29d45c8ac3f5b 270 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 1.1E-90 T 25-04-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CLFO_RS03075 fdbad96e04436a8afdb29d45c8ac3f5b 270 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 25-04-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CLFO_RS03075 fdbad96e04436a8afdb29d45c8ac3f5b 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 1.4E-41 T 25-04-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CLFO_RS03075 fdbad96e04436a8afdb29d45c8ac3f5b 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 28.118 T 25-04-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CLFO_RS03075 fdbad96e04436a8afdb29d45c8ac3f5b 270 SUPERFAMILY SSF48179 161 268 4.25E-40 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS09610 2b8e0155d41a455f5147240088420d82 144 Gene3D G3DSA:3.30.700.10 7 50 3.0E-4 T 25-04-2017 CLFO_RS09610 2b8e0155d41a455f5147240088420d82 144 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 26 1.7E-7 T 25-04-2017 IPR012902 Prokaryotic N-terminal methylation site CLFO_RS09610 2b8e0155d41a455f5147240088420d82 144 SUPERFAMILY SSF54523 7 88 1.1E-9 T 25-04-2017 CLFO_RS09610 2b8e0155d41a455f5147240088420d82 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.5E-7 T 25-04-2017 IPR012902 Prokaryotic N-terminal methylation site CLFO_RS04010 1b3436b9d1922836af924b6b5bd30a17 159 Gene3D G3DSA:1.10.8.10 3 40 3.4E-12 T 25-04-2017 CLFO_RS04010 1b3436b9d1922836af924b6b5bd30a17 159 SUPERFAMILY SSF46934 1 51 2.13E-11 T 25-04-2017 IPR009060 UBA-like GO:0005515 CLFO_RS04010 1b3436b9d1922836af924b6b5bd30a17 159 Pfam PF14242 Domain of unknown function (DUF4342) 53 123 4.7E-14 T 25-04-2017 IPR025642 Domain of unknown function DUF4342 CLFO_RS00575 27d453100780b6fcece0c0b8c0a5c97c 533 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 364 506 8.2E-31 T 25-04-2017 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLFO_RS00575 27d453100780b6fcece0c0b8c0a5c97c 533 Pfam PF01943 Polysaccharide biosynthesis protein 6 311 4.4E-34 T 25-04-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLFO_RS00575 27d453100780b6fcece0c0b8c0a5c97c 533 PIRSF PIRSF038958 1 523 2.6E-147 T 25-04-2017 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type CLFO_RS00340 b10fa16b7762a29afe7a6cf697c78652 252 SUPERFAMILY SSF53790 3 248 7.59E-68 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00340 b10fa16b7762a29afe7a6cf697c78652 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 208 7.3E-48 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00340 b10fa16b7762a29afe7a6cf697c78652 252 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 4 248 5.4E-106 T 25-04-2017 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 CLFO_RS00340 b10fa16b7762a29afe7a6cf697c78652 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 25-04-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CLFO_RS00340 b10fa16b7762a29afe7a6cf697c78652 252 Gene3D G3DSA:3.40.1010.10 3 111 6.2E-33 T 25-04-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00340 b10fa16b7762a29afe7a6cf697c78652 252 Gene3D G3DSA:3.30.950.10 112 230 1.2E-38 T 25-04-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS11420 bcea844bbe05d61f7df2d01159906b54 396 Gene3D G3DSA:3.40.50.10300 186 395 4.6E-88 T 25-04-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CLFO_RS11420 bcea844bbe05d61f7df2d01159906b54 396 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 392 1.1E-146 T 25-04-2017 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 CLFO_RS11420 bcea844bbe05d61f7df2d01159906b54 396 SUPERFAMILY SSF52507 1 177 9.42E-62 T 25-04-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CLFO_RS11420 bcea844bbe05d61f7df2d01159906b54 396 Pfam PF02441 Flavoprotein 5 132 1.3E-36 T 25-04-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CLFO_RS11420 bcea844bbe05d61f7df2d01159906b54 396 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 367 3.3E-75 T 25-04-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CLFO_RS11420 bcea844bbe05d61f7df2d01159906b54 396 Gene3D G3DSA:3.40.50.1950 2 185 1.6E-65 T 25-04-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CLFO_RS11420 bcea844bbe05d61f7df2d01159906b54 396 SUPERFAMILY SSF102645 183 395 9.55E-80 T 25-04-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CLFO_RS09630 bfe34390cde7027944cef03caffa34d9 87 Pfam PF10719 Late competence development protein ComFB 4 85 6.7E-24 T 25-04-2017 IPR019657 Late competence development protein ComFB CLFO_RS18615 026827a998527f718231fc756bca2a11 277 Pfam PF02548 Ketopantoate hydroxymethyltransferase 5 261 1.9E-100 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS18615 026827a998527f718231fc756bca2a11 277 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 6 266 39.297 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS18615 026827a998527f718231fc756bca2a11 277 Gene3D G3DSA:3.20.20.60 4 266 1.6E-105 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS18615 026827a998527f718231fc756bca2a11 277 PIRSF PIRSF000388 1 269 2.9E-99 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS18615 026827a998527f718231fc756bca2a11 277 SUPERFAMILY SSF51621 5 266 1.67E-96 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS18615 026827a998527f718231fc756bca2a11 277 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 5 266 2.5E-92 T 25-04-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CLFO_RS09330 96876ba5f21203697b72293a50ceb932 114 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 3 106 3.1E-28 T 25-04-2017 IPR010368 Control of competence regulator ComK, YlbF/YmcA CLFO_RS09330 96876ba5f21203697b72293a50ceb932 114 SUPERFAMILY SSF158622 1 107 2.75E-32 T 25-04-2017 IPR023378 YheA/YmcA-like domain CLFO_RS09330 96876ba5f21203697b72293a50ceb932 114 Hamap MF_01526 UPF0342 protein . 1 111 14.313 T 25-04-2017 IPR010368 Control of competence regulator ComK, YlbF/YmcA CLFO_RS09330 96876ba5f21203697b72293a50ceb932 114 Gene3D G3DSA:1.20.1500.10 1 110 3.6E-35 T 25-04-2017 IPR023378 YheA/YmcA-like domain CLFO_RS08500 483e73de22beda27f23a407e4b360265 235 Gene3D G3DSA:2.70.70.10 112 229 1.2E-25 T 25-04-2017 CLFO_RS08500 483e73de22beda27f23a407e4b360265 235 Pfam PF01551 Peptidase family M23 138 224 3.9E-18 T 25-04-2017 IPR016047 Peptidase M23 CLFO_RS08500 483e73de22beda27f23a407e4b360265 235 SUPERFAMILY SSF51261 47 228 4.34E-26 T 25-04-2017 IPR011055 Duplicated hybrid motif CLFO_RS15865 e8a8f1377c51cf2c3460046b7a8c4e40 168 Pfam PF04542 Sigma-70 region 2 2 71 9.2E-13 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS15865 e8a8f1377c51cf2c3460046b7a8c4e40 168 Gene3D G3DSA:1.10.10.10 96 157 1.1E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15865 e8a8f1377c51cf2c3460046b7a8c4e40 168 SUPERFAMILY SSF88946 2 83 1.05E-13 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS15865 e8a8f1377c51cf2c3460046b7a8c4e40 168 Pfam PF08281 Sigma-70, region 4 100 150 1.3E-6 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS15865 e8a8f1377c51cf2c3460046b7a8c4e40 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 1 156 2.9E-19 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS15865 e8a8f1377c51cf2c3460046b7a8c4e40 168 Gene3D G3DSA:1.10.1740.10 2 85 2.7E-14 T 25-04-2017 CLFO_RS15865 e8a8f1377c51cf2c3460046b7a8c4e40 168 SUPERFAMILY SSF88659 89 157 5.61E-9 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS13105 4b441c6867366c52c9f999634b8272c7 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 137 1.8E-32 T 25-04-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CLFO_RS13105 4b441c6867366c52c9f999634b8272c7 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 25-04-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CLFO_RS13105 4b441c6867366c52c9f999634b8272c7 346 Gene3D G3DSA:3.90.180.10 2 167 7.0E-53 T 25-04-2017 IPR011032 GroES-like CLFO_RS13105 4b441c6867366c52c9f999634b8272c7 346 SMART SM00829 10 343 1.8E-7 T 25-04-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CLFO_RS13105 4b441c6867366c52c9f999634b8272c7 346 Pfam PF00107 Zinc-binding dehydrogenase 178 304 4.5E-32 T 25-04-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CLFO_RS13105 4b441c6867366c52c9f999634b8272c7 346 Gene3D G3DSA:3.40.50.720 168 290 6.6E-42 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS13105 4b441c6867366c52c9f999634b8272c7 346 SUPERFAMILY SSF51735 141 310 4.86E-43 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS13105 4b441c6867366c52c9f999634b8272c7 346 SUPERFAMILY SSF50129 3 174 5.33E-57 T 25-04-2017 IPR011032 GroES-like CLFO_RS18120 a7b68a4920763f71f5119d5725382c97 112 Pfam PF08960 Domain of unknown function (DUF1874) 9 104 4.3E-34 T 25-04-2017 IPR015055 Acidianus two-tailed virus, Orf117 CLFO_RS18120 a7b68a4920763f71f5119d5725382c97 112 SUPERFAMILY SSF143602 8 111 2.88E-31 T 25-04-2017 CLFO_RS21330 667941d6834f1a41e8dbb6b348cac149 135 Pfam PF05635 23S rRNA-intervening sequence protein 17 121 1.0E-30 T 25-04-2017 IPR012657 23S rRNA-intervening sequence protein CLFO_RS21330 667941d6834f1a41e8dbb6b348cac149 135 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 20 126 1.0E-30 T 25-04-2017 IPR012657 23S rRNA-intervening sequence protein CLFO_RS21330 667941d6834f1a41e8dbb6b348cac149 135 SUPERFAMILY SSF158446 13 126 1.03E-32 T 25-04-2017 CLFO_RS21330 667941d6834f1a41e8dbb6b348cac149 135 Gene3D G3DSA:1.20.1440.60 12 126 1.2E-32 T 25-04-2017 IPR012657 23S rRNA-intervening sequence protein CLFO_RS12855 d5fc6789e45a0a68d9c9de43629837a0 475 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 7 467 1.8E-90 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS12855 d5fc6789e45a0a68d9c9de43629837a0 475 Pfam PF02447 GntP family permease 6 467 3.4E-99 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS15180 485875bd1ca5b58d6fd3dc5f59b23fff 316 Pfam PF00248 Aldo/keto reductase family 15 215 9.6E-23 T 25-04-2017 IPR023210 NADP-dependent oxidoreductase domain CLFO_RS15180 485875bd1ca5b58d6fd3dc5f59b23fff 316 Pfam PF00037 4Fe-4S binding domain 293 314 9.5E-5 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS15180 485875bd1ca5b58d6fd3dc5f59b23fff 316 Gene3D G3DSA:3.20.20.100 1 217 2.6E-34 T 25-04-2017 IPR023210 NADP-dependent oxidoreductase domain CLFO_RS15180 485875bd1ca5b58d6fd3dc5f59b23fff 316 SUPERFAMILY SSF51430 1 245 5.5E-38 T 25-04-2017 IPR023210 NADP-dependent oxidoreductase domain CLFO_RS15180 485875bd1ca5b58d6fd3dc5f59b23fff 316 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 298 309 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS15180 485875bd1ca5b58d6fd3dc5f59b23fff 316 Gene3D G3DSA:3.30.70.20 251 315 5.3E-15 T 25-04-2017 CLFO_RS15180 485875bd1ca5b58d6fd3dc5f59b23fff 316 PRINTS PR00069 Aldo-keto reductase signature 93 111 2.3E-7 T 25-04-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLFO_RS15180 485875bd1ca5b58d6fd3dc5f59b23fff 316 PRINTS PR00069 Aldo-keto reductase signature 128 145 2.3E-7 T 25-04-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLFO_RS15180 485875bd1ca5b58d6fd3dc5f59b23fff 316 PRINTS PR00069 Aldo-keto reductase signature 42 66 2.3E-7 T 25-04-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CLFO_RS15180 485875bd1ca5b58d6fd3dc5f59b23fff 316 SUPERFAMILY SSF54862 249 315 2.0E-17 T 25-04-2017 CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 Pfam PF13291 ACT domain 645 720 4.1E-20 T 25-04-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 Gene3D G3DSA:3.10.20.30 386 447 4.3E-24 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 Gene3D G3DSA:3.30.460.10 176 323 5.2E-51 T 25-04-2017 CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 SUPERFAMILY SSF109604 2 188 1.73E-74 T 25-04-2017 CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 Pfam PF04607 Region found in RelA / SpoT proteins 233 343 1.5E-39 T 25-04-2017 IPR007685 RelA/SpoT GO:0015969 CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 SMART SM00954 233 343 1.5E-69 T 25-04-2017 IPR007685 RelA/SpoT GO:0015969 CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 Pfam PF13328 HD domain 24 173 1.4E-51 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 SUPERFAMILY SSF55021 645 722 9.58E-13 T 25-04-2017 CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 24 719 5.4E-264 T 25-04-2017 IPR004811 RelA/SpoT family GO:0015969 CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 SUPERFAMILY SSF81301 178 391 1.63E-66 T 25-04-2017 CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 Gene3D G3DSA:3.30.70.260 646 718 3.3E-14 T 25-04-2017 CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 Pfam PF02824 TGS domain 387 446 2.4E-23 T 25-04-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 SUPERFAMILY SSF81271 374 447 3.6E-25 T 25-04-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CLFO_RS08990 c41c8b3a6e2a798cf343cec5f4af3edf 723 SMART SM00471 39 151 1.3E-10 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS12410 b6fa29b8ecb193cef75e9024715afc36 359 SUPERFAMILY SSF159774 55 355 8.89E-91 T 25-04-2017 IPR023158 YerB-like domain CLFO_RS12410 b6fa29b8ecb193cef75e9024715afc36 359 Gene3D G3DSA:3.50.90.10 46 356 2.4E-106 T 25-04-2017 IPR023158 YerB-like domain CLFO_RS12410 b6fa29b8ecb193cef75e9024715afc36 359 Pfam PF11258 Protein of unknown function (DUF3048) 58 347 3.2E-97 T 25-04-2017 IPR021416 Protein of unknown function DUF3048 CLFO_RS05495 ba0dec95c0748927974bb4f6c69ea71e 182 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 19 88 2.3E-32 T 25-04-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CLFO_RS05495 ba0dec95c0748927974bb4f6c69ea71e 182 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 11 182 29.579 T 25-04-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CLFO_RS05495 ba0dec95c0748927974bb4f6c69ea71e 182 ProSitePatterns PS00938 Initiation factor 3 signature. 70 83 - T 25-04-2017 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CLFO_RS05495 ba0dec95c0748927974bb4f6c69ea71e 182 SUPERFAMILY SSF55200 94 181 2.35E-30 T 25-04-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CLFO_RS05495 ba0dec95c0748927974bb4f6c69ea71e 182 SUPERFAMILY SSF54364 17 90 4.58E-29 T 25-04-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CLFO_RS05495 ba0dec95c0748927974bb4f6c69ea71e 182 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 19 181 1.7E-68 T 25-04-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CLFO_RS05495 ba0dec95c0748927974bb4f6c69ea71e 182 Gene3D G3DSA:3.30.110.10 91 181 2.1E-35 T 25-04-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CLFO_RS05495 ba0dec95c0748927974bb4f6c69ea71e 182 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 95 180 9.8E-35 T 25-04-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CLFO_RS05495 ba0dec95c0748927974bb4f6c69ea71e 182 Gene3D G3DSA:3.10.20.80 15 90 5.7E-35 T 25-04-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CLFO_RS17905 5257d13c537cd8dba251ab674e762add 122 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 99 6.3E-20 T 25-04-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CLFO_RS17905 5257d13c537cd8dba251ab674e762add 122 Gene3D G3DSA:3.90.470.20 1 121 3.3E-37 T 25-04-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CLFO_RS17905 5257d13c537cd8dba251ab674e762add 122 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 120 2.4E-32 T 25-04-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLFO_RS17905 5257d13c537cd8dba251ab674e762add 122 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 122 20.78 T 25-04-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLFO_RS17905 5257d13c537cd8dba251ab674e762add 122 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 120 2.1E-29 T 25-04-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLFO_RS17905 5257d13c537cd8dba251ab674e762add 122 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 103 6.0E-29 T 25-04-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLFO_RS17905 5257d13c537cd8dba251ab674e762add 122 SUPERFAMILY SSF56214 1 120 2.75E-29 T 25-04-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CLFO_RS20580 a161c0459adacfa845f55a3b4551572c 195 SUPERFAMILY SSF53323 2 182 1.83E-42 T 25-04-2017 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CLFO_RS20580 a161c0459adacfa845f55a3b4551572c 195 Gene3D G3DSA:3.40.920.10 2 177 4.7E-50 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS20580 a161c0459adacfa845f55a3b4551572c 195 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 173 2.1E-34 T 25-04-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CLFO_RS01725 a779cfdc32d5348f9876388cb36b6139 613 Pfam PF07568 Histidine kinase 416 489 1.0E-14 T 25-04-2017 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain CLFO_RS01725 a779cfdc32d5348f9876388cb36b6139 613 Gene3D G3DSA:3.30.450.40 257 407 3.4E-16 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS01725 a779cfdc32d5348f9876388cb36b6139 613 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 515 608 7.7E-7 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01725 a779cfdc32d5348f9876388cb36b6139 613 Gene3D G3DSA:3.40.50.300 15 230 1.7E-32 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01725 a779cfdc32d5348f9876388cb36b6139 613 Pfam PF13185 GAF domain 272 403 3.1E-7 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS01725 a779cfdc32d5348f9876388cb36b6139 613 SUPERFAMILY SSF55874 487 606 3.01E-15 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01725 a779cfdc32d5348f9876388cb36b6139 613 Gene3D G3DSA:3.30.565.10 471 606 1.1E-14 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS01725 a779cfdc32d5348f9876388cb36b6139 613 SUPERFAMILY SSF55781 255 419 2.84E-17 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS01725 a779cfdc32d5348f9876388cb36b6139 613 Pfam PF00005 ABC transporter 21 167 9.9E-11 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS01725 a779cfdc32d5348f9876388cb36b6139 613 SMART SM00065 272 412 2.4E-4 T 25-04-2017 IPR003018 GAF domain GO:0005515 CLFO_RS01725 a779cfdc32d5348f9876388cb36b6139 613 SUPERFAMILY SSF52540 17 219 2.02E-28 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01725 a779cfdc32d5348f9876388cb36b6139 613 SMART SM00387 511 609 6.9E-7 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04685 8a052a5a07e7c3f5469f4163fa85e2d1 124 Pfam PF04205 FMN-binding domain 48 120 1.8E-15 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS04685 8a052a5a07e7c3f5469f4163fa85e2d1 124 SMART SM00900 48 122 8.1E-17 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS12485 a5e5111bc1f1187080bcf75779fa3c1b 252 PIRSF PIRSF015601 1 250 8.7E-68 T 25-04-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS12485 a5e5111bc1f1187080bcf75779fa3c1b 252 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 16 250 1.2E-61 T 25-04-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS12485 a5e5111bc1f1187080bcf75779fa3c1b 252 Pfam PF04452 RNA methyltransferase 19 245 1.1E-70 T 25-04-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS12485 a5e5111bc1f1187080bcf75779fa3c1b 252 SUPERFAMILY SSF88697 1 71 4.47E-12 T 25-04-2017 IPR015947 PUA-like domain CLFO_RS12485 a5e5111bc1f1187080bcf75779fa3c1b 252 Gene3D G3DSA:3.40.1280.10 1 251 1.3E-77 T 25-04-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLFO_RS12485 a5e5111bc1f1187080bcf75779fa3c1b 252 SUPERFAMILY SSF75217 74 250 4.06E-50 T 25-04-2017 IPR029028 Alpha/beta knot methyltransferases CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 SMART SM00388 252 316 5.0E-12 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 SUPERFAMILY SSF158472 200 247 1.83E-6 T 25-04-2017 CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 SUPERFAMILY SSF55874 306 470 3.01E-47 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 Gene3D G3DSA:3.30.565.10 323 470 7.4E-49 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 470 3.8E-20 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 426 3.8E-20 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 412 3.8E-20 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 3.8E-20 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 Pfam PF00672 HAMP domain 179 246 5.6E-9 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 SUPERFAMILY SSF47384 235 317 4.12E-13 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 SMART SM00304 198 251 1.4E-7 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 Gene3D G3DSA:1.10.287.130 245 307 1.5E-12 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 315 1.9E-10 T 25-04-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 SMART SM00387 361 473 1.3E-38 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06080 e4e97513903cf3ca57829d4b28d892ce 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 471 7.3E-26 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS05120 24bbce755a6f8426f8a6da7bbb01c4d5 121 Pfam PF02152 Dihydroneopterin aldolase 4 116 1.1E-34 T 25-04-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLFO_RS05120 24bbce755a6f8426f8a6da7bbb01c4d5 121 SMART SM00905 4 117 2.1E-49 T 25-04-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLFO_RS05120 24bbce755a6f8426f8a6da7bbb01c4d5 121 TIGRFAM TIGR00526 folB_dom: FolB domain 1 120 7.3E-32 T 25-04-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLFO_RS05120 24bbce755a6f8426f8a6da7bbb01c4d5 121 Gene3D G3DSA:3.30.1130.10 1 118 1.8E-42 T 25-04-2017 CLFO_RS05120 24bbce755a6f8426f8a6da7bbb01c4d5 121 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 1.1E-36 T 25-04-2017 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLFO_RS05120 24bbce755a6f8426f8a6da7bbb01c4d5 121 SUPERFAMILY SSF55620 2 118 2.0E-38 T 25-04-2017 CLFO_RS10735 71b2f7a6b8174192e34f12240fae8210 234 SUPERFAMILY SSF55120 54 233 1.99E-46 T 25-04-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS10735 71b2f7a6b8174192e34f12240fae8210 234 SUPERFAMILY SSF55174 1 57 8.83E-15 T 25-04-2017 CLFO_RS10735 71b2f7a6b8174192e34f12240fae8210 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 224 6.1E-53 T 25-04-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLFO_RS10735 71b2f7a6b8174192e34f12240fae8210 234 Pfam PF00849 RNA pseudouridylate synthase 63 194 1.7E-23 T 25-04-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS10735 71b2f7a6b8174192e34f12240fae8210 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 25-04-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CLFO_RS10735 71b2f7a6b8174192e34f12240fae8210 234 Gene3D G3DSA:3.10.290.10 1 63 6.4E-23 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS10735 71b2f7a6b8174192e34f12240fae8210 234 Pfam PF01479 S4 domain 1 46 2.5E-13 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS10735 71b2f7a6b8174192e34f12240fae8210 234 SMART SM00363 1 63 7.6E-14 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS18200 de680b396149ceaf2c7c69a048fadec5 408 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 189 199 - T 25-04-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CLFO_RS18200 de680b396149ceaf2c7c69a048fadec5 408 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 2 383 47.775 T 25-04-2017 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CLFO_RS18200 de680b396149ceaf2c7c69a048fadec5 408 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 359 5.5E-139 T 25-04-2017 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CLFO_RS18200 de680b396149ceaf2c7c69a048fadec5 408 Pfam PF00483 Nucleotidyl transferase 7 258 1.2E-63 T 25-04-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLFO_RS18200 de680b396149ceaf2c7c69a048fadec5 408 Gene3D G3DSA:3.90.550.10 6 269 2.4E-83 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS18200 de680b396149ceaf2c7c69a048fadec5 408 Gene3D G3DSA:3.90.550.10 306 349 2.4E-83 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS18200 de680b396149ceaf2c7c69a048fadec5 408 SUPERFAMILY SSF51161 225 392 4.3E-29 T 25-04-2017 IPR011004 Trimeric LpxA-like CLFO_RS18200 de680b396149ceaf2c7c69a048fadec5 408 SUPERFAMILY SSF53448 5 262 2.62E-81 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS18200 de680b396149ceaf2c7c69a048fadec5 408 SUPERFAMILY SSF53448 323 339 2.62E-81 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS18200 de680b396149ceaf2c7c69a048fadec5 408 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 25-04-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CLFO_RS04670 2ba20aca2103b3588e18183ae7ceac47 471 Gene3D G3DSA:3.30.565.10 310 332 9.1E-10 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04670 2ba20aca2103b3588e18183ae7ceac47 471 Gene3D G3DSA:3.30.565.10 369 465 9.1E-10 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04670 2ba20aca2103b3588e18183ae7ceac47 471 Pfam PF07730 Histidine kinase 265 324 2.2E-10 T 25-04-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CLFO_RS04670 2ba20aca2103b3588e18183ae7ceac47 471 SMART SM00387 371 464 2.4E-4 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04670 2ba20aca2103b3588e18183ae7ceac47 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 461 4.6E-6 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS04670 2ba20aca2103b3588e18183ae7ceac47 471 SUPERFAMILY SSF55874 350 463 1.57E-13 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS00315 d2ff775a02e9d785d4687f0b85ad7df4 206 SUPERFAMILY SSF63965 2 204 3.27E-72 T 25-04-2017 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CLFO_RS00315 d2ff775a02e9d785d4687f0b85ad7df4 206 Gene3D G3DSA:3.40.50.10230 3 205 2.3E-85 T 25-04-2017 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CLFO_RS00315 d2ff775a02e9d785d4687f0b85ad7df4 206 Pfam PF02570 Precorrin-8X methylmutase 9 204 3.2E-81 T 25-04-2017 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CLFO_RS20205 152b3422133485c4001283603c425416 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 279 1.5E-20 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS20205 152b3422133485c4001283603c425416 282 SUPERFAMILY SSF161098 8 275 1.03E-32 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS20205 152b3422133485c4001283603c425416 282 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 4 278 1.3E-78 T 25-04-2017 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CLFO_RS20205 152b3422133485c4001283603c425416 282 Gene3D G3DSA:1.10.3720.10 48 281 1.6E-38 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS13745 27d31aee876777743763a091f826d887 260 SMART SM00382 27 215 3.2E-15 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS13745 27d31aee876777743763a091f826d887 260 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS13745 27d31aee876777743763a091f826d887 260 Gene3D G3DSA:3.40.50.300 3 235 1.3E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13745 27d31aee876777743763a091f826d887 260 SUPERFAMILY SSF52540 3 230 6.96E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13745 27d31aee876777743763a091f826d887 260 Pfam PF00005 ABC transporter 18 167 7.5E-32 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS17750 a8c832a4c5ae561fda58aac64246cb84 377 Pfam PF07907 YibE/F-like protein 121 360 4.6E-84 T 25-04-2017 IPR012507 YibE/F-like CLFO_RS17570 085f9fbd672e8b3eeb73a851edadc2ba 317 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 309 1.4E-104 T 25-04-2017 CLFO_RS17570 085f9fbd672e8b3eeb73a851edadc2ba 317 Pfam PF02650 WhiA C-terminal HTH domain 226 309 2.6E-37 T 25-04-2017 IPR023054 Sporulation regulator WhiA, C-terminal CLFO_RS17570 085f9fbd672e8b3eeb73a851edadc2ba 317 Gene3D G3DSA:3.10.28.10 120 208 4.6E-11 T 25-04-2017 IPR027434 Homing endonuclease GO:0004519 CLFO_RS17570 085f9fbd672e8b3eeb73a851edadc2ba 317 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 312 35.45 T 25-04-2017 IPR003802 Sporulation regulator WhiA GO:0043937 CLFO_RS17570 085f9fbd672e8b3eeb73a851edadc2ba 317 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 107 6.7E-29 T 25-04-2017 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain CLFO_RS17570 085f9fbd672e8b3eeb73a851edadc2ba 317 Pfam PF14527 WhiA LAGLIDADG-like domain 132 223 7.2E-34 T 25-04-2017 CLFO_RS17570 085f9fbd672e8b3eeb73a851edadc2ba 317 SUPERFAMILY SSF55608 121 227 3.16E-18 T 25-04-2017 IPR027434 Homing endonuclease GO:0004519 CLFO_RS00775 b6258551b5c1ec8142b127b182ed89b6 403 Gene3D G3DSA:2.40.50.100 67 98 5.8E-15 T 25-04-2017 CLFO_RS00775 b6258551b5c1ec8142b127b182ed89b6 403 Gene3D G3DSA:2.40.50.100 213 245 5.8E-15 T 25-04-2017 CLFO_RS00775 b6258551b5c1ec8142b127b182ed89b6 403 Gene3D G3DSA:1.20.1600.10 135 211 2.0E-4 T 25-04-2017 CLFO_RS00775 b6258551b5c1ec8142b127b182ed89b6 403 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 178 399 5.7E-53 T 25-04-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CLFO_RS00775 b6258551b5c1ec8142b127b182ed89b6 403 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 317 4.0E-32 T 25-04-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLFO_RS00775 b6258551b5c1ec8142b127b182ed89b6 403 SUPERFAMILY SSF111369 192 318 2.22E-24 T 25-04-2017 CLFO_RS00775 b6258551b5c1ec8142b127b182ed89b6 403 SUPERFAMILY SSF111369 130 165 2.22E-24 T 25-04-2017 CLFO_RS00775 b6258551b5c1ec8142b127b182ed89b6 403 SUPERFAMILY SSF111369 55 101 2.22E-24 T 25-04-2017 CLFO_RS00980 bda0711b9b54a2c7c35b7d982a1ed63a 383 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 368 1.4E-123 T 25-04-2017 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLFO_RS00980 bda0711b9b54a2c7c35b7d982a1ed63a 383 Gene3D G3DSA:3.40.50.2000 1 205 6.6E-88 T 25-04-2017 CLFO_RS00980 bda0711b9b54a2c7c35b7d982a1ed63a 383 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 370 2.2E-162 T 25-04-2017 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 CLFO_RS00980 bda0711b9b54a2c7c35b7d982a1ed63a 383 SUPERFAMILY SSF53756 3 375 7.18E-137 T 25-04-2017 CLFO_RS00980 bda0711b9b54a2c7c35b7d982a1ed63a 383 Gene3D G3DSA:3.40.50.2000 206 368 2.6E-64 T 25-04-2017 CLFO_RS13150 67cf7ef578bbe9f8ceea328a3cfeffb4 299 SUPERFAMILY SSF53850 92 293 3.26E-24 T 25-04-2017 CLFO_RS13150 67cf7ef578bbe9f8ceea328a3cfeffb4 299 Pfam PF03466 LysR substrate binding domain 92 292 5.0E-26 T 25-04-2017 IPR005119 LysR, substrate-binding CLFO_RS13150 67cf7ef578bbe9f8ceea328a3cfeffb4 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.1E-15 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS13150 67cf7ef578bbe9f8ceea328a3cfeffb4 299 Gene3D G3DSA:3.40.190.10 172 264 7.6E-15 T 25-04-2017 CLFO_RS13150 67cf7ef578bbe9f8ceea328a3cfeffb4 299 Gene3D G3DSA:3.40.190.10 92 171 8.4E-8 T 25-04-2017 CLFO_RS13150 67cf7ef578bbe9f8ceea328a3cfeffb4 299 SUPERFAMILY SSF46785 7 82 7.48E-17 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13150 67cf7ef578bbe9f8ceea328a3cfeffb4 299 Gene3D G3DSA:1.10.10.10 5 85 2.3E-20 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS17270 ad9cb3bd28d588bbe73954f09d970b29 369 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 76 88 - T 25-04-2017 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 CLFO_RS17270 ad9cb3bd28d588bbe73954f09d970b29 369 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 115 129 3.6E-18 T 25-04-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLFO_RS17270 ad9cb3bd28d588bbe73954f09d970b29 369 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 12 28 3.6E-18 T 25-04-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLFO_RS17270 ad9cb3bd28d588bbe73954f09d970b29 369 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 163 176 3.6E-18 T 25-04-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLFO_RS17270 ad9cb3bd28d588bbe73954f09d970b29 369 SUPERFAMILY SSF53335 13 334 2.06E-89 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS17270 ad9cb3bd28d588bbe73954f09d970b29 369 Pfam PF00145 C-5 cytosine-specific DNA methylase 13 332 2.3E-71 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS17270 ad9cb3bd28d588bbe73954f09d970b29 369 Gene3D G3DSA:3.40.50.150 12 222 4.7E-61 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS17270 ad9cb3bd28d588bbe73954f09d970b29 369 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 13 325 1.4E-62 T 25-04-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLFO_RS17270 ad9cb3bd28d588bbe73954f09d970b29 369 Gene3D G3DSA:3.90.120.10 284 320 6.4E-8 T 25-04-2017 CLFO_RS17325 e6ef8d8ec2fca1bebb8f3c3c9d50fa4b 298 SUPERFAMILY SSF141571 42 166 4.84E-19 T 25-04-2017 CLFO_RS17325 e6ef8d8ec2fca1bebb8f3c3c9d50fa4b 298 Pfam PF13599 Pentapeptide repeats (9 copies) 42 117 4.4E-7 T 25-04-2017 IPR001646 Pentapeptide repeat CLFO_RS04575 6d4cb08707d083bc25e7a8a4cb54dea3 535 PIRSF PIRSF002741 6 532 8.2E-82 T 25-04-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLFO_RS04575 6d4cb08707d083bc25e7a8a4cb54dea3 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 442 1.5E-69 T 25-04-2017 IPR000914 Solute-binding protein family 5 domain CLFO_RS04575 6d4cb08707d083bc25e7a8a4cb54dea3 535 Gene3D G3DSA:3.10.105.10 309 500 6.3E-40 T 25-04-2017 CLFO_RS04575 6d4cb08707d083bc25e7a8a4cb54dea3 535 SUPERFAMILY SSF53850 56 519 3.62E-100 T 25-04-2017 CLFO_RS04575 6d4cb08707d083bc25e7a8a4cb54dea3 535 Gene3D G3DSA:3.40.190.10 211 308 1.5E-24 T 25-04-2017 CLFO_RS04575 6d4cb08707d083bc25e7a8a4cb54dea3 535 Gene3D G3DSA:3.90.76.10 66 210 6.7E-32 T 25-04-2017 CLFO_RS13900 e214b586e149a77ad4ac5904049e9e10 394 SUPERFAMILY SSF51338 357 393 3.17E-19 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS13900 e214b586e149a77ad4ac5904049e9e10 394 SUPERFAMILY SSF51338 14 68 3.17E-19 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS13900 e214b586e149a77ad4ac5904049e9e10 394 SUPERFAMILY SSF51556 67 357 2.66E-38 T 25-04-2017 IPR032466 Metal-dependent hydrolase CLFO_RS13900 e214b586e149a77ad4ac5904049e9e10 394 Gene3D G3DSA:3.20.20.140 73 392 2.4E-37 T 25-04-2017 CLFO_RS13900 e214b586e149a77ad4ac5904049e9e10 394 Gene3D G3DSA:2.30.40.10 14 72 7.6E-16 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS13900 e214b586e149a77ad4ac5904049e9e10 394 Pfam PF01979 Amidohydrolase family 64 390 5.2E-21 T 25-04-2017 IPR006680 Amidohydrolase-related GO:0016787 CLFO_RS12510 fe6c8c763601e678ce5a6372e15e0642 343 Gene3D G3DSA:3.30.450.40 177 340 2.7E-43 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS12510 fe6c8c763601e678ce5a6372e15e0642 343 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 5 338 2.8E-106 T 25-04-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CLFO_RS12510 fe6c8c763601e678ce5a6372e15e0642 343 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 2 331 30.67 T 25-04-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CLFO_RS12510 fe6c8c763601e678ce5a6372e15e0642 343 Gene3D G3DSA:1.10.10.10 2 84 5.0E-39 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12510 fe6c8c763601e678ce5a6372e15e0642 343 PIRSF PIRSF005485 1 342 3.6E-114 T 25-04-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CLFO_RS12510 fe6c8c763601e678ce5a6372e15e0642 343 SUPERFAMILY SSF55781 72 339 8.04E-61 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS12510 fe6c8c763601e678ce5a6372e15e0642 343 SUPERFAMILY SSF46785 2 82 5.03E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12510 fe6c8c763601e678ce5a6372e15e0642 343 Pfam PF01628 HrcA protein C terminal domain 105 324 4.2E-63 T 25-04-2017 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 CLFO_RS08260 b31c42ff9c2980afba56666024f61e61 146 Gene3D G3DSA:3.90.79.10 3 128 1.4E-16 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS08260 b31c42ff9c2980afba56666024f61e61 146 SUPERFAMILY SSF55811 2 128 1.49E-16 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS08260 b31c42ff9c2980afba56666024f61e61 146 Pfam PF00293 NUDIX domain 9 113 4.7E-8 T 25-04-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CLFO_RS15640 ba11fcf63b3d3d259d9e860ba34cad15 351 Pfam PF00072 Response regulator receiver domain 12 124 3.3E-29 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15640 ba11fcf63b3d3d259d9e860ba34cad15 351 SUPERFAMILY SSF109604 155 341 1.1E-39 T 25-04-2017 CLFO_RS15640 ba11fcf63b3d3d259d9e860ba34cad15 351 SUPERFAMILY SSF52172 10 162 1.85E-38 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS15640 ba11fcf63b3d3d259d9e860ba34cad15 351 Gene3D G3DSA:1.10.3210.10 173 343 1.4E-24 T 25-04-2017 IPR006674 HD domain CLFO_RS15640 ba11fcf63b3d3d259d9e860ba34cad15 351 SMART SM00448 10 124 5.4E-38 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS15640 ba11fcf63b3d3d259d9e860ba34cad15 351 SMART SM00471 173 310 2.1E-6 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS15640 ba11fcf63b3d3d259d9e860ba34cad15 351 Pfam PF13487 HD domain 228 291 2.8E-17 T 25-04-2017 CLFO_RS15640 ba11fcf63b3d3d259d9e860ba34cad15 351 Gene3D G3DSA:3.40.50.2300 10 133 3.5E-38 T 25-04-2017 CLFO_RS20440 da60784a36b0f7fc6b72a3371f65afc4 320 PIRSF PIRSF000450 1 309 2.6E-153 T 25-04-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CLFO_RS20440 da60784a36b0f7fc6b72a3371f65afc4 320 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 55.878 T 25-04-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CLFO_RS20440 da60784a36b0f7fc6b72a3371f65afc4 320 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.0E-143 T 25-04-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CLFO_RS20440 da60784a36b0f7fc6b72a3371f65afc4 320 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.3E-142 T 25-04-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CLFO_RS20440 da60784a36b0f7fc6b72a3371f65afc4 320 SUPERFAMILY SSF52317 17 297 2.62E-110 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS20440 da60784a36b0f7fc6b72a3371f65afc4 320 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 5.0E-106 T 25-04-2017 CLFO_RS20440 da60784a36b0f7fc6b72a3371f65afc4 320 Gene3D G3DSA:3.40.50.880 34 300 7.5E-128 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS15035 ddb31226ccf61bf1cc9ca82216a4a12c 221 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15035 ddb31226ccf61bf1cc9ca82216a4a12c 221 SMART SM00382 30 216 4.3E-8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15035 ddb31226ccf61bf1cc9ca82216a4a12c 221 Pfam PF00005 ABC transporter 21 167 2.1E-32 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15035 ddb31226ccf61bf1cc9ca82216a4a12c 221 SUPERFAMILY SSF52540 3 218 6.23E-56 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15035 ddb31226ccf61bf1cc9ca82216a4a12c 221 Gene3D G3DSA:3.40.50.300 2 217 4.9E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02030 c55186cf5d3f9b4191b8184177d66912 342 SUPERFAMILY SSF55326 1 165 1.79E-51 T 25-04-2017 CLFO_RS02030 c55186cf5d3f9b4191b8184177d66912 342 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 1 339 47.941 T 25-04-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLFO_RS02030 c55186cf5d3f9b4191b8184177d66912 342 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 1 332 4.8E-142 T 25-04-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CLFO_RS02030 c55186cf5d3f9b4191b8184177d66912 342 Gene3D G3DSA:3.90.650.10 167 338 3.3E-70 T 25-04-2017 IPR010918 AIR synthase-related protein, C-terminal domain CLFO_RS02030 c55186cf5d3f9b4191b8184177d66912 342 SUPERFAMILY SSF56042 166 339 6.58E-60 T 25-04-2017 IPR010918 AIR synthase-related protein, C-terminal domain CLFO_RS02030 c55186cf5d3f9b4191b8184177d66912 342 Pfam PF00586 AIR synthase related protein, N-terminal domain 69 159 1.3E-17 T 25-04-2017 IPR016188 PurM-like, N-terminal domain CLFO_RS02030 c55186cf5d3f9b4191b8184177d66912 342 Pfam PF02769 AIR synthase related protein, C-terminal domain 171 338 3.4E-31 T 25-04-2017 IPR010918 AIR synthase-related protein, C-terminal domain CLFO_RS02030 c55186cf5d3f9b4191b8184177d66912 342 Gene3D G3DSA:3.30.1330.10 17 165 7.1E-62 T 25-04-2017 IPR016188 PurM-like, N-terminal domain CLFO_RS15305 8e2db040ed7aee2e21897a6e1a2a8be6 528 Gene3D G3DSA:3.40.50.300 3 244 2.3E-54 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15305 8e2db040ed7aee2e21897a6e1a2a8be6 528 Gene3D G3DSA:3.40.50.300 270 503 7.5E-43 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15305 8e2db040ed7aee2e21897a6e1a2a8be6 528 Pfam PF00005 ABC transporter 20 185 6.8E-22 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15305 8e2db040ed7aee2e21897a6e1a2a8be6 528 Pfam PF00005 ABC transporter 288 449 4.4E-13 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15305 8e2db040ed7aee2e21897a6e1a2a8be6 528 SUPERFAMILY SSF52540 272 503 2.43E-38 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15305 8e2db040ed7aee2e21897a6e1a2a8be6 528 ProSitePatterns PS00211 ABC transporters family signature. 422 436 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15305 8e2db040ed7aee2e21897a6e1a2a8be6 528 SMART SM00382 296 507 1.4 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15305 8e2db040ed7aee2e21897a6e1a2a8be6 528 SMART SM00382 29 249 4.6E-5 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS15305 8e2db040ed7aee2e21897a6e1a2a8be6 528 SUPERFAMILY SSF52540 3 243 4.66E-50 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15445 33c91fc326251cb99c759c7a9a38df73 162 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 3 155 8.5E-34 T 25-04-2017 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 CLFO_RS15445 33c91fc326251cb99c759c7a9a38df73 162 Pfam PF01066 CDP-alcohol phosphatidyltransferase 1 61 3.4E-14 T 25-04-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLFO_RS15445 33c91fc326251cb99c759c7a9a38df73 162 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 39 61 - T 25-04-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CLFO_RS01705 31b886138334c52950ab2e4cf0fcb80c 851 Pfam PF00700 Bacterial flagellin C-terminal helical region 766 849 5.8E-28 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS01705 31b886138334c52950ab2e4cf0fcb80c 851 PRINTS PR00207 Flagellin signature 35 52 7.7E-25 T 25-04-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLFO_RS01705 31b886138334c52950ab2e4cf0fcb80c 851 PRINTS PR00207 Flagellin signature 74 93 7.7E-25 T 25-04-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLFO_RS01705 31b886138334c52950ab2e4cf0fcb80c 851 PRINTS PR00207 Flagellin signature 109 132 7.7E-25 T 25-04-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CLFO_RS01705 31b886138334c52950ab2e4cf0fcb80c 851 SUPERFAMILY SSF64518 1 315 1.05E-83 T 25-04-2017 CLFO_RS01705 31b886138334c52950ab2e4cf0fcb80c 851 SUPERFAMILY SSF64518 694 849 1.05E-83 T 25-04-2017 CLFO_RS01705 31b886138334c52950ab2e4cf0fcb80c 851 Gene3D G3DSA:1.20.1330.10 688 717 3.5E-54 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS01705 31b886138334c52950ab2e4cf0fcb80c 851 Gene3D G3DSA:1.20.1330.10 52 138 3.5E-54 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS01705 31b886138334c52950ab2e4cf0fcb80c 851 Gene3D G3DSA:1.20.1330.10 752 805 3.5E-54 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS01705 31b886138334c52950ab2e4cf0fcb80c 851 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 3.8E-43 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS18870 e54bbcaa56225ad2fb7c11cdb9a2c9cc 74 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS18870 e54bbcaa56225ad2fb7c11cdb9a2c9cc 74 SUPERFAMILY SSF54862 4 71 3.58E-16 T 25-04-2017 CLFO_RS18870 e54bbcaa56225ad2fb7c11cdb9a2c9cc 74 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 15 26 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS18870 e54bbcaa56225ad2fb7c11cdb9a2c9cc 74 Gene3D G3DSA:3.30.70.20 7 72 1.3E-15 T 25-04-2017 CLFO_RS18870 e54bbcaa56225ad2fb7c11cdb9a2c9cc 74 Pfam PF12838 4Fe-4S dicluster domain 14 64 3.1E-11 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS18285 ee6b93dfe31db3848e516fa986ef0034 311 Pfam PF00892 EamA-like transporter family 156 295 4.0E-21 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS18285 ee6b93dfe31db3848e516fa986ef0034 311 Pfam PF00892 EamA-like transporter family 6 143 1.1E-22 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS18285 ee6b93dfe31db3848e516fa986ef0034 311 SUPERFAMILY SSF103481 40 143 3.27E-11 T 25-04-2017 CLFO_RS18285 ee6b93dfe31db3848e516fa986ef0034 311 SUPERFAMILY SSF103481 199 300 9.29E-14 T 25-04-2017 CLFO_RS15825 302cec852c391c9b2836d6099cbd01f4 385 SUPERFAMILY SSF53756 1 379 7.22E-98 T 25-04-2017 CLFO_RS15825 302cec852c391c9b2836d6099cbd01f4 385 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 366 2.2E-90 T 25-04-2017 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLFO_RS15825 302cec852c391c9b2836d6099cbd01f4 385 Gene3D G3DSA:3.40.50.2000 1 208 3.5E-48 T 25-04-2017 CLFO_RS15825 302cec852c391c9b2836d6099cbd01f4 385 Gene3D G3DSA:3.40.50.2000 209 367 3.0E-12 T 25-04-2017 CLFO_RS15825 302cec852c391c9b2836d6099cbd01f4 385 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 3 365 9.9E-139 T 25-04-2017 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CLFO_RS18735 714b451310c868899dd65201cda7a263 313 Gene3D G3DSA:3.30.470.20 119 289 2.6E-7 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS18735 714b451310c868899dd65201cda7a263 313 SUPERFAMILY SSF56059 112 289 1.56E-18 T 25-04-2017 CLFO_RS18735 714b451310c868899dd65201cda7a263 313 Pfam PF08443 RimK-like ATP-grasp domain 128 308 1.2E-4 T 25-04-2017 IPR013651 ATP-grasp fold, RimK-type CLFO_RS03865 554366b1c9e36943fd4d89018e296bae 359 Gene3D G3DSA:1.20.1090.10 161 355 6.6E-48 T 25-04-2017 CLFO_RS03865 554366b1c9e36943fd4d89018e296bae 359 SUPERFAMILY SSF56796 9 354 5.5E-63 T 25-04-2017 CLFO_RS03865 554366b1c9e36943fd4d89018e296bae 359 Gene3D G3DSA:3.40.50.1970 8 159 2.7E-36 T 25-04-2017 CLFO_RS03865 554366b1c9e36943fd4d89018e296bae 359 PIRSF PIRSF000112 1 356 6.8E-84 T 25-04-2017 CLFO_RS03865 554366b1c9e36943fd4d89018e296bae 359 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 345 8.7E-52 T 25-04-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLFO_RS06480 a22aee058c3c4fd0e6c320076e8d10bd 128 Gene3D G3DSA:3.30.1330.40 5 126 2.0E-52 T 25-04-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLFO_RS06480 a22aee058c3c4fd0e6c320076e8d10bd 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 25-04-2017 IPR019897 RidA, conserved site CLFO_RS06480 a22aee058c3c4fd0e6c320076e8d10bd 128 Pfam PF01042 Endoribonuclease L-PSP 9 124 4.9E-44 T 25-04-2017 IPR006175 YjgF/YER057c/UK114 family CLFO_RS06480 a22aee058c3c4fd0e6c320076e8d10bd 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 5.7E-53 T 25-04-2017 IPR006056 RidA family CLFO_RS06480 a22aee058c3c4fd0e6c320076e8d10bd 128 SUPERFAMILY SSF55298 2 126 1.57E-47 T 25-04-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 SUPERFAMILY SSF88946 114 223 5.36E-55 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 149 386 4.3E-124 T 25-04-2017 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 177 190 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 Pfam PF00140 Sigma-70 factor, region 1.2 115 148 1.3E-18 T 25-04-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 149 374 8.7E-39 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 Gene3D G3DSA:1.10.10.10 226 277 1.3E-28 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 Pfam PF04545 Sigma-70, region 4 321 374 5.1E-20 T 25-04-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 Pfam PF03979 Sigma-70 factor, region 1.1 22 89 5.6E-18 T 25-04-2017 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 346 372 - T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 SUPERFAMILY SSF88659 226 300 7.63E-24 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 Pfam PF04539 Sigma-70 region 3 232 308 3.4E-32 T 25-04-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 Gene3D G3DSA:1.10.601.10 17 222 1.8E-78 T 25-04-2017 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 15 386 35.081 T 25-04-2017 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 SUPERFAMILY SSF88659 283 385 8.6E-31 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 Gene3D G3DSA:1.10.10.10 316 386 1.5E-33 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 Pfam PF04542 Sigma-70 region 2 153 222 4.3E-23 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 PRINTS PR00046 Major sigma-70 factor signature 361 372 9.9E-32 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 PRINTS PR00046 Major sigma-70 factor signature 346 361 9.9E-32 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 PRINTS PR00046 Major sigma-70 factor signature 325 337 9.9E-32 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 PRINTS PR00046 Major sigma-70 factor signature 201 209 9.9E-32 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS12250 561df4d2e0da0c9a5bfdaffffaba30ea 386 PRINTS PR00046 Major sigma-70 factor signature 177 190 9.9E-32 T 25-04-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS03260 6e88206d47d1c048f5b09eb0eae3a380 509 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 25-04-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLFO_RS03260 6e88206d47d1c048f5b09eb0eae3a380 509 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 2.4E-64 T 25-04-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CLFO_RS03260 6e88206d47d1c048f5b09eb0eae3a380 509 PIRSF PIRSF000538 2 501 1.0E-188 T 25-04-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLFO_RS03260 6e88206d47d1c048f5b09eb0eae3a380 509 Gene3D G3DSA:3.30.420.40 2 252 2.3E-108 T 25-04-2017 CLFO_RS03260 6e88206d47d1c048f5b09eb0eae3a380 509 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 495 3.1E-235 T 25-04-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CLFO_RS03260 6e88206d47d1c048f5b09eb0eae3a380 509 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 61.338 T 25-04-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CLFO_RS03260 6e88206d47d1c048f5b09eb0eae3a380 509 Gene3D G3DSA:3.30.420.40 253 495 1.6E-105 T 25-04-2017 CLFO_RS03260 6e88206d47d1c048f5b09eb0eae3a380 509 SUPERFAMILY SSF53067 254 496 1.04E-87 T 25-04-2017 CLFO_RS03260 6e88206d47d1c048f5b09eb0eae3a380 509 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 25-04-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CLFO_RS03260 6e88206d47d1c048f5b09eb0eae3a380 509 SUPERFAMILY SSF53067 3 254 1.88E-99 T 25-04-2017 CLFO_RS03260 6e88206d47d1c048f5b09eb0eae3a380 509 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 4.0E-86 T 25-04-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CLFO_RS13130 6abe23b746f6ab3f7678ddbb5f864775 590 Gene3D G3DSA:3.30.565.10 430 581 1.5E-17 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13130 6abe23b746f6ab3f7678ddbb5f864775 590 SUPERFAMILY SSF55874 433 579 7.07E-15 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13130 6abe23b746f6ab3f7678ddbb5f864775 590 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 579 1.2E-6 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13130 6abe23b746f6ab3f7678ddbb5f864775 590 Pfam PF06580 Histidine kinase 380 458 3.9E-24 T 25-04-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLFO_RS13130 6abe23b746f6ab3f7678ddbb5f864775 590 Pfam PF00672 HAMP domain 297 362 5.8E-10 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS13130 6abe23b746f6ab3f7678ddbb5f864775 590 SMART SM00304 315 367 3.3E-8 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS13130 6abe23b746f6ab3f7678ddbb5f864775 590 Pfam PF02743 Cache domain 41 276 2.9E-24 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS13130 6abe23b746f6ab3f7678ddbb5f864775 590 Gene3D G3DSA:3.30.450.20 183 293 9.0E-13 T 25-04-2017 CLFO_RS13130 6abe23b746f6ab3f7678ddbb5f864775 590 SUPERFAMILY SSF158472 317 366 7.98E-11 T 25-04-2017 CLFO_RS04920 244ae43b21804efd172f6f81e169a6d6 215 SUPERFAMILY SSF161098 5 205 4.19E-33 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04920 244ae43b21804efd172f6f81e169a6d6 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 212 1.1E-18 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS04920 244ae43b21804efd172f6f81e169a6d6 215 Gene3D G3DSA:1.10.3720.10 5 209 8.9E-28 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS03995 1712c8bdc70a9bdbcd24997d18176a4c 164 Pfam PF11188 Protein of unknown function (DUF2975) 42 164 7.3E-18 T 25-04-2017 IPR021354 Protein of unknown function DUF2975 CLFO_RS10700 aeb0f799c732ab277f307b77f6414aac 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 197 2.2E-59 T 25-04-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CLFO_RS10700 aeb0f799c732ab277f307b77f6414aac 214 SMART SM00855 3 157 2.2E-17 T 25-04-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CLFO_RS10700 aeb0f799c732ab277f307b77f6414aac 214 SUPERFAMILY SSF53254 1 201 2.88E-59 T 25-04-2017 IPR029033 Histidine phosphatase superfamily CLFO_RS10700 aeb0f799c732ab277f307b77f6414aac 214 Gene3D G3DSA:3.40.50.1240 1 202 2.3E-58 T 25-04-2017 IPR029033 Histidine phosphatase superfamily CLFO_RS10700 aeb0f799c732ab277f307b77f6414aac 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 25-04-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CLFO_RS03755 6eb0a3b99a4547a12aaa2e6b59a456eb 346 PIRSF PIRSF006470 32 346 7.7E-100 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS03755 6eb0a3b99a4547a12aaa2e6b59a456eb 346 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 63 302 3.1E-74 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS03755 6eb0a3b99a4547a12aaa2e6b59a456eb 346 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 56 331 3.5E-88 T 25-04-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CLFO_RS03755 6eb0a3b99a4547a12aaa2e6b59a456eb 346 SUPERFAMILY SSF53850 66 143 7.9E-5 T 25-04-2017 CLFO_RS03755 6eb0a3b99a4547a12aaa2e6b59a456eb 346 SUPERFAMILY SSF53850 176 238 7.9E-5 T 25-04-2017 CLFO_RS15505 5fba58208d871d0565fabd040a96dd61 265 SUPERFAMILY SSF54506 55 265 7.59E-5 T 25-04-2017 CLFO_RS15505 5fba58208d871d0565fabd040a96dd61 265 Gene3D G3DSA:3.10.310.10 203 245 6.3E-5 T 25-04-2017 CLFO_RS15505 5fba58208d871d0565fabd040a96dd61 265 SUPERFAMILY SSF54506 200 262 8.89E-7 T 25-04-2017 CLFO_RS02470 485555b5ec0aeb88ab4122aa5d6fb18a 77 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 2.7E-8 T 25-04-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CLFO_RS02470 485555b5ec0aeb88ab4122aa5d6fb18a 77 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 38 54 2.7E-8 T 25-04-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CLFO_RS02470 485555b5ec0aeb88ab4122aa5d6fb18a 77 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 2.7E-8 T 25-04-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CLFO_RS02470 485555b5ec0aeb88ab4122aa5d6fb18a 77 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 75 5.5E-17 T 25-04-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CLFO_RS02470 485555b5ec0aeb88ab4122aa5d6fb18a 77 Pfam PF01455 HupF/HypC family 1 59 6.3E-18 T 25-04-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CLFO_RS02470 485555b5ec0aeb88ab4122aa5d6fb18a 77 SUPERFAMILY SSF159127 1 73 1.83E-17 T 25-04-2017 CLFO_RS15210 aebe5f7d3a521630cfd99bda2896d851 244 Pfam PF01061 ABC-2 type transporter 10 208 1.2E-6 T 25-04-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CLFO_RS06690 b43de1991ecdf96b48e81b36768a0d37 346 SMART SM00854 35 274 1.1E-91 T 25-04-2017 IPR019079 Capsule synthesis protein, CapA CLFO_RS06690 b43de1991ecdf96b48e81b36768a0d37 346 SUPERFAMILY SSF56300 34 294 2.53E-43 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS06690 b43de1991ecdf96b48e81b36768a0d37 346 Gene3D G3DSA:3.60.21.30 35 270 3.4E-20 T 25-04-2017 CLFO_RS06690 b43de1991ecdf96b48e81b36768a0d37 346 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 35 273 3.7E-75 T 25-04-2017 IPR019079 Capsule synthesis protein, CapA CLFO_RS08885 c986a3700e8de8d92cf257937541ce66 369 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 45 56 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS08885 c986a3700e8de8d92cf257937541ce66 369 Gene3D G3DSA:3.30.70.20 4 57 7.3E-11 T 25-04-2017 CLFO_RS08885 c986a3700e8de8d92cf257937541ce66 369 SUPERFAMILY SSF54862 4 56 6.88E-12 T 25-04-2017 CLFO_RS08885 c986a3700e8de8d92cf257937541ce66 369 Pfam PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus 155 329 8.1E-30 T 25-04-2017 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal CLFO_RS08885 c986a3700e8de8d92cf257937541ce66 369 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 11 22 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS08885 c986a3700e8de8d92cf257937541ce66 369 Pfam PF12838 4Fe-4S dicluster domain 11 56 1.6E-7 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS09090 f0eaa04353af792424d2dc23ac879b62 354 Pfam PF01168 Alanine racemase, N-terminal domain 7 222 1.0E-21 T 25-04-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CLFO_RS09090 f0eaa04353af792424d2dc23ac879b62 354 Gene3D G3DSA:3.20.20.10 10 219 2.1E-17 T 25-04-2017 IPR029066 PLP-binding barrel CLFO_RS09090 f0eaa04353af792424d2dc23ac879b62 354 SUPERFAMILY SSF51419 7 227 2.33E-27 T 25-04-2017 IPR029066 PLP-binding barrel CLFO_RS09240 1440cbe22c7f1ebe8ceea648abef6979 149 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 25-04-2017 IPR030489 Transcription regulator Rrf2-type, conserved site CLFO_RS09240 1440cbe22c7f1ebe8ceea648abef6979 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 133 3.5E-41 T 25-04-2017 IPR000944 Transcription regulator Rrf2-type CLFO_RS09240 1440cbe22c7f1ebe8ceea648abef6979 149 SUPERFAMILY SSF46785 2 137 2.94E-37 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09240 1440cbe22c7f1ebe8ceea648abef6979 149 Gene3D G3DSA:1.10.10.10 2 139 1.8E-36 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09240 1440cbe22c7f1ebe8ceea648abef6979 149 Pfam PF02082 Transcriptional regulator 1 82 1.6E-29 T 25-04-2017 IPR000944 Transcription regulator Rrf2-type CLFO_RS15570 469c6d0ec61d05904d9a69cfbf317f1f 394 Pfam PF04285 Protein of unknown function (DUF444) 189 389 6.2E-83 T 25-04-2017 IPR006698 Uncharacterised protein family UPF0229 CLFO_RS15570 469c6d0ec61d05904d9a69cfbf317f1f 394 Pfam PF04285 Protein of unknown function (DUF444) 4 186 1.3E-47 T 25-04-2017 IPR006698 Uncharacterised protein family UPF0229 CLFO_RS15570 469c6d0ec61d05904d9a69cfbf317f1f 394 Gene3D G3DSA:3.30.1180.20 79 129 6.7E-4 T 25-04-2017 CLFO_RS15570 469c6d0ec61d05904d9a69cfbf317f1f 394 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 10 386 6.8E-145 T 25-04-2017 IPR014230 Sporulation protein YhbH CLFO_RS15570 469c6d0ec61d05904d9a69cfbf317f1f 394 SUPERFAMILY SSF53300 219 344 2.47E-8 T 25-04-2017 IPR002035 von Willebrand factor, type A CLFO_RS15570 469c6d0ec61d05904d9a69cfbf317f1f 394 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 391 33.119 T 25-04-2017 IPR006698 Uncharacterised protein family UPF0229 CLFO_RS13730 a7037464cf2127c28f31636b9f4dfea8 127 Gene3D G3DSA:1.10.10.10 11 121 1.3E-34 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13730 a7037464cf2127c28f31636b9f4dfea8 127 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 33 93 3.9E-16 T 25-04-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CLFO_RS13730 a7037464cf2127c28f31636b9f4dfea8 127 SUPERFAMILY SSF46785 15 117 3.74E-25 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16485 af8021847eb1c04e6ef1c7c94ab1a01c 99 Pfam PF00936 BMC domain 5 80 5.3E-28 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS16485 af8021847eb1c04e6ef1c7c94ab1a01c 99 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 25-04-2017 IPR020808 Bacterial microcompartments protein, conserved site CLFO_RS16485 af8021847eb1c04e6ef1c7c94ab1a01c 99 SUPERFAMILY SSF143414 3 94 1.96E-31 T 25-04-2017 CLFO_RS16485 af8021847eb1c04e6ef1c7c94ab1a01c 99 SMART SM00877 4 80 8.1E-35 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS16485 af8021847eb1c04e6ef1c7c94ab1a01c 99 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 48 8.0E-9 T 25-04-2017 CLFO_RS07155 cd52f1bfa9ee3b7e50ba31459d846daa 208 Pfam PF12651 Ribbon-helix-helix domain 171 206 3.7E-5 T 25-04-2017 CLFO_RS07155 cd52f1bfa9ee3b7e50ba31459d846daa 208 Gene3D G3DSA:3.30.70.270 18 163 1.4E-38 T 25-04-2017 CLFO_RS07155 cd52f1bfa9ee3b7e50ba31459d846daa 208 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 21 159 2.1E-36 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS07155 cd52f1bfa9ee3b7e50ba31459d846daa 208 SMART SM00267 1 160 2.2E-27 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS07155 cd52f1bfa9ee3b7e50ba31459d846daa 208 SUPERFAMILY SSF55073 20 161 2.2E-37 T 25-04-2017 IPR029787 Nucleotide cyclase CLFO_RS07155 cd52f1bfa9ee3b7e50ba31459d846daa 208 Pfam PF00990 Diguanylate cyclase, GGDEF domain 11 156 2.2E-33 T 25-04-2017 IPR000160 GGDEF domain CLFO_RS18710 b640b1eeeb955e33063ca80dfcb7d7a1 542 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 171 4.0E-11 T 25-04-2017 IPR024474 Zinc-finger binding domain of transposase IS66 CLFO_RS18710 b640b1eeeb955e33063ca80dfcb7d7a1 542 Pfam PF03050 Transposase IS66 family 191 482 3.0E-84 T 25-04-2017 IPR004291 Transposase, IS66 CLFO_RS11920 4d4d402425507670def3323cc8afe8cb 422 Pfam PF02687 FtsX-like permease family 299 415 5.0E-22 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS11920 4d4d402425507670def3323cc8afe8cb 422 Pfam PF12704 MacB-like periplasmic core domain 19 238 2.2E-11 T 25-04-2017 IPR025857 MacB-like periplasmic core domain CLFO_RS02980 41a4e2faebde6405f26cca2aec501d47 275 Pfam PF10648 Immunoglobulin-like domain of bacterial spore germination 177 259 3.0E-21 T 25-04-2017 IPR018911 Bacterial spore germination, immunoglobulin-like domain CLFO_RS02980 41a4e2faebde6405f26cca2aec501d47 275 Pfam PF14343 PrcB C-terminal 92 148 1.4E-10 T 25-04-2017 IPR025748 PrcB C-terminal domain CLFO_RS07095 9c9d031e8a8ce81563ec21e887c78a46 260 Pfam PF00174 Oxidoreductase molybdopterin binding domain 157 255 1.1E-5 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS07095 9c9d031e8a8ce81563ec21e887c78a46 260 Gene3D G3DSA:3.90.420.10 108 240 1.6E-4 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS07095 9c9d031e8a8ce81563ec21e887c78a46 260 SUPERFAMILY SSF56524 122 240 1.11E-6 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS11055 8673208f13d707ba55ed6d880b658d9f 132 Pfam PF04347 Flagellar biosynthesis protein, FliO 24 81 1.3E-6 T 25-04-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CLFO_RS03645 e8f5a72e8aa0b2af2e534ec8274dd7a3 250 SMART SM00900 162 248 2.7E-4 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS03645 e8f5a72e8aa0b2af2e534ec8274dd7a3 250 SMART SM00900 56 140 0.021 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS03645 e8f5a72e8aa0b2af2e534ec8274dd7a3 250 Pfam PF04205 FMN-binding domain 62 138 1.3E-5 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS03645 e8f5a72e8aa0b2af2e534ec8274dd7a3 250 Pfam PF04205 FMN-binding domain 171 245 1.3E-6 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS13975 65e2a91fa1158fcdf6610e4a70617fe4 233 Pfam PF09335 SNARE associated Golgi protein 75 191 1.7E-26 T 25-04-2017 IPR032816 SNARE associated Golgi protein CLFO_RS01765 5a1c6bd553a258981e6e33dc909861a4 261 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 256 2.1E-65 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS01765 5a1c6bd553a258981e6e33dc909861a4 261 Gene3D G3DSA:3.30.1240.10 85 174 1.1E-10 T 25-04-2017 CLFO_RS01765 5a1c6bd553a258981e6e33dc909861a4 261 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 9.7E-33 T 25-04-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CLFO_RS01765 5a1c6bd553a258981e6e33dc909861a4 261 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 256 3.1E-58 T 25-04-2017 IPR000150 Cof protein GO:0016787 CLFO_RS01765 5a1c6bd553a258981e6e33dc909861a4 261 SUPERFAMILY SSF56784 1 260 9.25E-71 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS01765 5a1c6bd553a258981e6e33dc909861a4 261 Gene3D G3DSA:3.40.50.1000 1 73 8.0E-53 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS01765 5a1c6bd553a258981e6e33dc909861a4 261 Gene3D G3DSA:3.40.50.1000 175 260 8.0E-53 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS14195 1b43b20e81142939b12b2f6e1c4831e1 229 Gene3D G3DSA:3.20.20.70 17 226 2.7E-21 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS14195 1b43b20e81142939b12b2f6e1c4831e1 229 Pfam PF04055 Radical SAM superfamily 27 181 2.0E-12 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS14195 1b43b20e81142939b12b2f6e1c4831e1 229 SUPERFAMILY SSF102114 22 203 7.59E-20 T 25-04-2017 CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 2.3E-125 T 25-04-2017 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 5.0E-41 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.0E-41 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 5.0E-41 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 5.0E-41 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.0E-41 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 5.0E-41 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 SUPERFAMILY SSF51735 6 252 8.21E-76 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 6.0E-14 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 6.0E-14 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 6.0E-14 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 250 1.5E-57 T 25-04-2017 CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 25-04-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLFO_RS12925 31ab72930e17ad05c3000d198854274d 253 Gene3D G3DSA:3.40.50.720 6 252 4.3E-80 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS09575 16ed3219ce73934fba72fdeb1a08a3cc 223 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 25-04-2017 IPR012902 Prokaryotic N-terminal methylation site CLFO_RS02185 f62e51d19a99ff74ccf74b826c90945b 212 Pfam PF06130 Phosphate propanoyltransferase 137 200 1.9E-17 T 25-04-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CLFO_RS02185 f62e51d19a99ff74ccf74b826c90945b 212 Pfam PF06130 Phosphate propanoyltransferase 28 107 7.1E-27 T 25-04-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CLFO_RS02185 f62e51d19a99ff74ccf74b826c90945b 212 PIRSF PIRSF010130 1 212 8.3E-81 T 25-04-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CLFO_RS17040 819ecae58679fac2f86fc071cb90647f 329 Pfam PF13280 WYL domain 145 323 7.0E-29 T 25-04-2017 IPR026881 WYL domain CLFO_RS17040 819ecae58679fac2f86fc071cb90647f 329 Pfam PF08279 HTH domain 12 51 1.7E-6 T 25-04-2017 IPR013196 Helix-turn-helix, type 11 CLFO_RS17040 819ecae58679fac2f86fc071cb90647f 329 Gene3D G3DSA:1.10.10.10 5 71 1.2E-6 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS21100 082299d4aea594c404470ca5c050fe5e 447 SUPERFAMILY SSF52540 183 432 8.67E-50 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21100 082299d4aea594c404470ca5c050fe5e 447 Gene3D G3DSA:1.10.860.10 10 112 5.9E-38 T 25-04-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CLFO_RS21100 082299d4aea594c404470ca5c050fe5e 447 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 440 9.7E-178 T 25-04-2017 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CLFO_RS21100 082299d4aea594c404470ca5c050fe5e 447 Gene3D G3DSA:3.40.50.300 170 441 7.7E-105 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21100 082299d4aea594c404470ca5c050fe5e 447 SUPERFAMILY SSF48024 8 119 1.96E-37 T 25-04-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CLFO_RS21100 082299d4aea594c404470ca5c050fe5e 447 Pfam PF03796 DnaB-like helicase C terminal domain 185 439 2.0E-113 T 25-04-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CLFO_RS21100 082299d4aea594c404470ca5c050fe5e 447 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 9.6E-36 T 25-04-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CLFO_RS17035 73b184fa988c0635c01924fc8db4a8e1 400 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 219 369 2.9E-13 T 25-04-2017 IPR032871 AHH domain-containing protein CLFO_RS17035 73b184fa988c0635c01924fc8db4a8e1 400 Pfam PF14107 Domain of unknown function (DUF4280) 5 110 3.0E-14 T 25-04-2017 IPR025460 Protein of unknown function DUF4280 CLFO_RS00805 ce2f757d5004a0868793ac4cd167aea0 134 Pfam PF04138 GtrA-like protein 11 124 4.5E-25 T 25-04-2017 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CLFO_RS06340 292ff159fb28caee63bf15a54b1778fc 437 Gene3D G3DSA:3.60.15.10 49 299 1.9E-35 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS06340 292ff159fb28caee63bf15a54b1778fc 437 SMART SM00849 64 259 1.4E-9 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS06340 292ff159fb28caee63bf15a54b1778fc 437 Gene3D G3DSA:2.60.40.920 342 430 1.7E-6 T 25-04-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CLFO_RS06340 292ff159fb28caee63bf15a54b1778fc 437 Pfam PF00753 Metallo-beta-lactamase superfamily 61 256 1.3E-15 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS06340 292ff159fb28caee63bf15a54b1778fc 437 SUPERFAMILY SSF49373 341 434 2.16E-7 T 25-04-2017 IPR008964 Invasin/intimin cell-adhesion fragments CLFO_RS06340 292ff159fb28caee63bf15a54b1778fc 437 SUPERFAMILY SSF56281 53 301 1.97E-52 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS17370 4a63f6cb1cb4f3888c9b38fe475df33b 800 Pfam PF12846 AAA-like domain 450 724 6.1E-9 T 25-04-2017 CLFO_RS17370 4a63f6cb1cb4f3888c9b38fe475df33b 800 SUPERFAMILY SSF52540 414 782 5.84E-31 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17370 4a63f6cb1cb4f3888c9b38fe475df33b 800 Gene3D G3DSA:3.40.50.300 621 770 2.3E-18 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17370 4a63f6cb1cb4f3888c9b38fe475df33b 800 Gene3D G3DSA:3.40.50.300 448 519 2.3E-18 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18420 c69dd434489688cf350946745af968ef 345 Gene3D G3DSA:3.40.630.30 32 116 4.0E-9 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS18420 c69dd434489688cf350946745af968ef 345 Pfam PF13673 Acetyltransferase (GNAT) domain 29 116 6.3E-6 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS18420 c69dd434489688cf350946745af968ef 345 SUPERFAMILY SSF52374 146 328 1.45E-22 T 25-04-2017 CLFO_RS18420 c69dd434489688cf350946745af968ef 345 Gene3D G3DSA:3.40.50.620 132 328 3.0E-36 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS18420 c69dd434489688cf350946745af968ef 345 PIRSF PIRSF005751 1 344 2.4E-113 T 25-04-2017 IPR005216 Citrate lyase ligase GO:0008771 CLFO_RS18420 c69dd434489688cf350946745af968ef 345 SUPERFAMILY SSF55729 22 115 8.25E-11 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS18420 c69dd434489688cf350946745af968ef 345 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 123 327 2.0E-67 T 25-04-2017 CLFO_RS18420 c69dd434489688cf350946745af968ef 345 Pfam PF08218 Citrate lyase ligase C-terminal domain 146 326 5.5E-70 T 25-04-2017 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CLFO_RS18420 c69dd434489688cf350946745af968ef 345 SMART SM00764 145 326 1.5E-93 T 25-04-2017 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CLFO_RS18420 c69dd434489688cf350946745af968ef 345 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 14 329 1.1E-87 T 25-04-2017 IPR005216 Citrate lyase ligase GO:0008771 CLFO_RS18510 3c2ac06f152e4c5631f63d63ffaf0462 131 SUPERFAMILY SSF52172 1 127 6.83E-27 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS18510 3c2ac06f152e4c5631f63d63ffaf0462 131 Gene3D G3DSA:3.40.50.2300 1 127 5.6E-31 T 25-04-2017 CLFO_RS18510 3c2ac06f152e4c5631f63d63ffaf0462 131 Pfam PF00072 Response regulator receiver domain 3 123 1.9E-19 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18510 3c2ac06f152e4c5631f63d63ffaf0462 131 SMART SM00448 1 124 3.5E-24 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13460 4174044969296ff038de14be00749bee 386 Pfam PF00149 Calcineurin-like phosphoesterase 162 329 3.7E-12 T 25-04-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CLFO_RS13460 4174044969296ff038de14be00749bee 386 SUPERFAMILY SSF56300 163 382 2.49E-35 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS13460 4174044969296ff038de14be00749bee 386 Gene3D G3DSA:3.60.21.10 160 334 4.6E-26 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS20940 cb33e91bb83a97224e3f6658b611c92e 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.398 T 25-04-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS20940 cb33e91bb83a97224e3f6658b611c92e 159 Gene3D G3DSA:3.40.1280.10 2 159 1.5E-60 T 25-04-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLFO_RS20940 cb33e91bb83a97224e3f6658b611c92e 159 Pfam PF02590 Predicted SPOUT methyltransferase 2 158 1.4E-57 T 25-04-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS20940 cb33e91bb83a97224e3f6658b611c92e 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 9.0E-52 T 25-04-2017 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS20940 cb33e91bb83a97224e3f6658b611c92e 159 PIRSF PIRSF004505 1 159 9.9E-53 T 25-04-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS20940 cb33e91bb83a97224e3f6658b611c92e 159 SUPERFAMILY SSF75217 2 157 3.01E-55 T 25-04-2017 IPR029028 Alpha/beta knot methyltransferases CLFO_RS01790 deb7bb81ed5a396bd3b91f87c2e21f0a 152 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 138 8.2E-40 T 25-04-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CLFO_RS01790 deb7bb81ed5a396bd3b91f87c2e21f0a 152 Gene3D G3DSA:3.40.50.300 5 150 4.0E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01790 deb7bb81ed5a396bd3b91f87c2e21f0a 152 SUPERFAMILY SSF52540 24 130 1.18E-22 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01790 deb7bb81ed5a396bd3b91f87c2e21f0a 152 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 132 2.1E-39 T 25-04-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CLFO_RS01875 249a450ed4b9623680e7628d97a14af2 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 5.8E-5 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS01875 249a450ed4b9623680e7628d97a14af2 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 5.8E-5 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS01875 249a450ed4b9623680e7628d97a14af2 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 5.8E-5 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS01875 249a450ed4b9623680e7628d97a14af2 152 SMART SM00347 27 127 1.5E-9 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS01875 249a450ed4b9623680e7628d97a14af2 152 Gene3D G3DSA:1.10.10.10 26 144 4.4E-20 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS01875 249a450ed4b9623680e7628d97a14af2 152 Pfam PF01047 MarR family 34 91 1.6E-6 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS01875 249a450ed4b9623680e7628d97a14af2 152 SUPERFAMILY SSF46785 34 137 1.04E-18 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS14220 a4d5f1ee00f0a3d35bca14208e7a2312 88 Gene3D G3DSA:3.40.1620.10 1 50 1.6E-9 T 25-04-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CLFO_RS14220 a4d5f1ee00f0a3d35bca14208e7a2312 88 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 65 4.5E-14 T 25-04-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CLFO_RS14220 a4d5f1ee00f0a3d35bca14208e7a2312 88 SUPERFAMILY SSF143120 2 64 2.88E-16 T 25-04-2017 CLFO_RS14220 a4d5f1ee00f0a3d35bca14208e7a2312 88 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 1.3E-9 T 25-04-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CLFO_RS21235 6fa98a96620eb9ac07cc8d43b7f9db5f 297 Gene3D G3DSA:1.10.443.10 125 294 8.1E-33 T 25-04-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS21235 6fa98a96620eb9ac07cc8d43b7f9db5f 297 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 13 92 3.2E-10 T 25-04-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CLFO_RS21235 6fa98a96620eb9ac07cc8d43b7f9db5f 297 SUPERFAMILY SSF56349 12 293 3.83E-41 T 25-04-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLFO_RS21235 6fa98a96620eb9ac07cc8d43b7f9db5f 297 Pfam PF00589 Phage integrase family 133 283 7.2E-27 T 25-04-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS21235 6fa98a96620eb9ac07cc8d43b7f9db5f 297 Gene3D G3DSA:1.10.150.130 13 107 7.7E-11 T 25-04-2017 IPR023109 Integrase/recombinase, N-terminal CLFO_RS06685 7d5e6907443c60ccbd6dd7377d5389ba 734 SMART SM01325 88 712 6.5E-190 T 25-04-2017 IPR022601 Protein of unknown function DUF3160 CLFO_RS06685 7d5e6907443c60ccbd6dd7377d5389ba 734 Pfam PF11369 Protein of unknown function (DUF3160) 92 711 9.7E-187 T 25-04-2017 IPR022601 Protein of unknown function DUF3160 CLFO_RS07975 d26c6faa9a27c176b313b26d777071a4 118 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 2.9E-46 T 25-04-2017 IPR014204 Sporulation stage V, protein AE CLFO_RS07975 d26c6faa9a27c176b313b26d777071a4 118 Pfam PF03862 SpoVA protein 3 111 6.7E-36 T 25-04-2017 IPR005562 SpoVA CLFO_RS03125 8221d5594b038f79e9ceb2e07c11e6a7 394 SUPERFAMILY SSF103473 11 383 1.01E-48 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS03125 8221d5594b038f79e9ceb2e07c11e6a7 394 Pfam PF07690 Major Facilitator Superfamily 18 349 7.0E-31 T 25-04-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLFO_RS03125 8221d5594b038f79e9ceb2e07c11e6a7 394 Gene3D G3DSA:1.20.1250.20 11 184 9.9E-23 T 25-04-2017 CLFO_RS03125 8221d5594b038f79e9ceb2e07c11e6a7 394 Gene3D G3DSA:1.20.1250.20 206 383 7.7E-16 T 25-04-2017 CLFO_RS09095 b102ff9bbde6f5215e4e09f4aedb2a38 356 SUPERFAMILY SSF55729 91 207 8.38E-8 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS09095 b102ff9bbde6f5215e4e09f4aedb2a38 356 Gene3D G3DSA:3.40.630.30 105 212 1.0E-7 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS18550 c094046ce641ed7b33ad141b95c9b2d9 108 SUPERFAMILY SSF52833 2 105 4.35E-24 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS18550 c094046ce641ed7b33ad141b95c9b2d9 108 Pfam PF00085 Thioredoxin 3 103 3.1E-22 T 25-04-2017 IPR013766 Thioredoxin domain GO:0045454 CLFO_RS18550 c094046ce641ed7b33ad141b95c9b2d9 108 Gene3D G3DSA:3.40.30.10 2 104 8.5E-24 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS18550 c094046ce641ed7b33ad141b95c9b2d9 108 PIRSF PIRSF000077 1 104 3.7E-21 T 25-04-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CLFO_RS14125 ef4e56ef50fc85637c381e429ea10c3a 308 Pfam PF01925 Sulfite exporter TauE/SafE 177 290 8.3E-9 T 25-04-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 CLFO_RS14125 ef4e56ef50fc85637c381e429ea10c3a 308 Pfam PF01925 Sulfite exporter TauE/SafE 4 150 1.1E-9 T 25-04-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 CLFO_RS08325 cd7ee1a84b8ff5800b6cb7cb7e9f1d16 452 Gene3D G3DSA:3.90.1150.10 332 450 1.6E-43 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS08325 cd7ee1a84b8ff5800b6cb7cb7e9f1d16 452 Pfam PF00202 Aminotransferase class-III 36 448 6.1E-124 T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS08325 cd7ee1a84b8ff5800b6cb7cb7e9f1d16 452 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 263 300 - T 25-04-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CLFO_RS08325 cd7ee1a84b8ff5800b6cb7cb7e9f1d16 452 Gene3D G3DSA:3.40.640.10 81 331 1.7E-86 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS08325 cd7ee1a84b8ff5800b6cb7cb7e9f1d16 452 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 30 448 5.2E-166 T 25-04-2017 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 CLFO_RS08325 cd7ee1a84b8ff5800b6cb7cb7e9f1d16 452 SUPERFAMILY SSF53383 40 449 3.54E-130 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS07630 838f0eb37f4acd2652f251697968ff36 686 Pfam PF07510 Protein of unknown function (DUF1524) 415 545 1.1E-28 T 25-04-2017 IPR011089 Domain of unknown function DUF1524 CLFO_RS07630 838f0eb37f4acd2652f251697968ff36 686 Pfam PF03235 Protein of unknown function DUF262 10 224 1.2E-33 T 25-04-2017 IPR004919 Domain of unknown function DUF262 CLFO_RS10910 a4ff34f3dd72bf5e41f39a39421bdb85 209 SUPERFAMILY SSF53448 1 189 3.09E-33 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS10910 a4ff34f3dd72bf5e41f39a39421bdb85 209 Gene3D G3DSA:3.90.550.10 1 114 7.2E-26 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS10910 a4ff34f3dd72bf5e41f39a39421bdb85 209 Pfam PF00535 Glycosyl transferase family 2 4 160 1.5E-28 T 25-04-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLFO_RS11720 0a13dba4a1349122afc48f65a3c83283 416 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 43.089 T 25-04-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS11720 0a13dba4a1349122afc48f65a3c83283 416 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 1.5E-98 T 25-04-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CLFO_RS11720 0a13dba4a1349122afc48f65a3c83283 416 SUPERFAMILY SSF55205 2 414 9.94E-133 T 25-04-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CLFO_RS11720 0a13dba4a1349122afc48f65a3c83283 416 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 414 3.4E-163 T 25-04-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS11720 0a13dba4a1349122afc48f65a3c83283 416 Gene3D G3DSA:3.65.10.10 221 413 3.8E-61 T 25-04-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CLFO_RS11720 0a13dba4a1349122afc48f65a3c83283 416 Gene3D G3DSA:3.65.10.10 21 220 8.1E-61 T 25-04-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CLFO_RS04350 f93f80b28cd56fbd30463e3ac2b51da3 72 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 48 62 - T 25-04-2017 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLFO_RS04350 f93f80b28cd56fbd30463e3ac2b51da3 72 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 10 69 1.6E-26 T 25-04-2017 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLFO_RS04350 f93f80b28cd56fbd30463e3ac2b51da3 72 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 25 34 - T 25-04-2017 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLFO_RS05130 1ce948092f33883af6a1ece496ae571f 258 Gene3D G3DSA:3.20.20.70 10 256 2.2E-97 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS05130 1ce948092f33883af6a1ece496ae571f 258 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 10 256 7.0E-114 T 25-04-2017 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CLFO_RS05130 1ce948092f33883af6a1ece496ae571f 258 SUPERFAMILY SSF51569 10 258 6.69E-95 T 25-04-2017 CLFO_RS05130 1ce948092f33883af6a1ece496ae571f 258 Pfam PF00793 DAHP synthetase I family 17 253 1.3E-76 T 25-04-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CLFO_RS13905 89b708272ad5a73249cb3a83b37d567e 288 SUPERFAMILY SSF51730 1 287 5.69E-78 T 25-04-2017 IPR029041 FAD-linked oxidoreductase-like CLFO_RS13905 89b708272ad5a73249cb3a83b37d567e 288 Pfam PF02219 Methylenetetrahydrofolate reductase 2 286 2.4E-71 T 25-04-2017 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CLFO_RS13905 89b708272ad5a73249cb3a83b37d567e 288 Gene3D G3DSA:3.20.20.220 1 288 4.4E-85 T 25-04-2017 IPR029041 FAD-linked oxidoreductase-like CLFO_RS14905 bcf9a3813bcecf1a2bcf1ee12bbb8c04 35 Gene3D G3DSA:1.10.490.50 1 27 3.2E-9 T 25-04-2017 IPR012925 TipAS antibiotic-recognition domain CLFO_RS14905 bcf9a3813bcecf1a2bcf1ee12bbb8c04 35 Pfam PF07739 TipAS antibiotic-recognition domain 1 27 5.4E-8 T 25-04-2017 IPR012925 TipAS antibiotic-recognition domain CLFO_RS14905 bcf9a3813bcecf1a2bcf1ee12bbb8c04 35 SUPERFAMILY SSF89082 1 27 7.19E-9 T 25-04-2017 IPR012925 TipAS antibiotic-recognition domain CLFO_RS01840 1117b1d9cbc1f444433cae838383b0ce 416 Gene3D G3DSA:2.40.50.100 66 97 1.4E-11 T 25-04-2017 CLFO_RS01840 1117b1d9cbc1f444433cae838383b0ce 416 Gene3D G3DSA:2.40.50.100 220 251 1.4E-11 T 25-04-2017 CLFO_RS01840 1117b1d9cbc1f444433cae838383b0ce 416 SUPERFAMILY SSF111369 134 336 3.27E-6 T 25-04-2017 CLFO_RS01840 1117b1d9cbc1f444433cae838383b0ce 416 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 330 2.2E-18 T 25-04-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLFO_RS01840 1117b1d9cbc1f444433cae838383b0ce 416 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 192 413 2.9E-31 T 25-04-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CLFO_RS16755 885e59aa4f86637fd8d954b0c1430f9f 181 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 18 86 8.7E-6 T 25-04-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CLFO_RS16755 885e59aa4f86637fd8d954b0c1430f9f 181 SUPERFAMILY SSF53254 15 140 1.3E-15 T 25-04-2017 IPR029033 Histidine phosphatase superfamily CLFO_RS16755 885e59aa4f86637fd8d954b0c1430f9f 181 Gene3D G3DSA:3.40.50.1240 15 138 1.4E-11 T 25-04-2017 IPR029033 Histidine phosphatase superfamily CLFO_RS16200 f391b176a9929f7d845e9d295e10cb4c 649 Gene3D G3DSA:3.40.50.300 294 507 1.5E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16200 f391b176a9929f7d845e9d295e10cb4c 649 SUPERFAMILY SSF52540 292 508 1.63E-36 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16200 f391b176a9929f7d845e9d295e10cb4c 649 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 405 421 - T 25-04-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS16200 f391b176a9929f7d845e9d295e10cb4c 649 PIRSF PIRSF005814 1 538 2.7E-185 T 25-04-2017 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CLFO_RS16200 f391b176a9929f7d845e9d295e10cb4c 649 SMART SM00534 323 508 2.7E-72 T 25-04-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS16200 f391b176a9929f7d845e9d295e10cb4c 649 SUPERFAMILY SSF48334 22 284 5.1E-18 T 25-04-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLFO_RS16200 f391b176a9929f7d845e9d295e10cb4c 649 Pfam PF00488 MutS domain V 326 506 5.0E-35 T 25-04-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CLFO_RS16200 f391b176a9929f7d845e9d295e10cb4c 649 SMART SM00533 9 311 1.3E-5 T 25-04-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CLFO_RS05760 26796fe6465887594c0ded12a618db76 96 Gene3D G3DSA:3.30.70.240 9 72 5.5E-24 T 25-04-2017 IPR000640 Translation elongation factor EFG, V domain CLFO_RS05760 26796fe6465887594c0ded12a618db76 96 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 9 90 1.3E-11 T 25-04-2017 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 CLFO_RS05760 26796fe6465887594c0ded12a618db76 96 SUPERFAMILY SSF143430 9 87 2.35E-23 T 25-04-2017 CLFO_RS05760 26796fe6465887594c0ded12a618db76 96 Pfam PF09827 CRISPR associated protein Cas2 10 76 5.8E-18 T 25-04-2017 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 CLFO_RS05760 26796fe6465887594c0ded12a618db76 96 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 8 96 12.955 T 25-04-2017 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 CLFO_RS15630 505ceae2f5350344176c3a60fe08dd64 208 Pfam PF09582 Iron only nitrogenase protein AnfO (AnfO_nitrog) 4 191 2.5E-62 T 25-04-2017 IPR014287 Nitrogenase iron-iron, accessory protein AnfO CLFO_RS15630 505ceae2f5350344176c3a60fe08dd64 208 TIGRFAM TIGR02940 anfO_nitrog: Fe-only nitrogenase accessory protein AnfO 5 193 3.4E-44 T 25-04-2017 IPR014287 Nitrogenase iron-iron, accessory protein AnfO CLFO_RS19930 32321221d013e0fd9caa64c7ab2129bc 579 SMART SM00382 176 315 3.3E-23 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS19930 32321221d013e0fd9caa64c7ab2129bc 579 ProSitePatterns PS00674 AAA-protein family signature. 283 301 - T 25-04-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CLFO_RS19930 32321221d013e0fd9caa64c7ab2129bc 579 SUPERFAMILY SSF52540 136 381 8.75E-68 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19930 32321221d013e0fd9caa64c7ab2129bc 579 Gene3D G3DSA:3.40.50.300 136 321 4.7E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19930 32321221d013e0fd9caa64c7ab2129bc 579 SUPERFAMILY SSF140990 397 577 1.57E-48 T 25-04-2017 CLFO_RS19930 32321221d013e0fd9caa64c7ab2129bc 579 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 98 573 4.9E-159 T 25-04-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLFO_RS19930 32321221d013e0fd9caa64c7ab2129bc 579 Gene3D G3DSA:1.10.8.60 322 387 4.3E-21 T 25-04-2017 CLFO_RS19930 32321221d013e0fd9caa64c7ab2129bc 579 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 575 30.035 T 25-04-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CLFO_RS19930 32321221d013e0fd9caa64c7ab2129bc 579 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 180 312 5.9E-43 T 25-04-2017 IPR003959 ATPase, AAA-type, core GO:0005524 CLFO_RS19930 32321221d013e0fd9caa64c7ab2129bc 579 Pfam PF01434 Peptidase family M41 374 572 7.1E-46 T 25-04-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CLFO_RS10160 1b402fac761008feeb5a09ab866deaaa 191 Gene3D G3DSA:3.90.1570.10 5 188 3.4E-43 T 25-04-2017 IPR012296 Nuclease, putative, TT1808 CLFO_RS10160 1b402fac761008feeb5a09ab866deaaa 191 SUPERFAMILY SSF52980 3 188 6.97E-41 T 25-04-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLFO_RS10160 1b402fac761008feeb5a09ab866deaaa 191 Pfam PF05685 Putative restriction endonuclease 14 181 1.2E-32 T 25-04-2017 IPR008538 Domain of unknown function DUF820 CLFO_RS09355 4a66feee898602753c1b07d0c14f6ab3 603 Pfam PF01348 Type II intron maturase 424 504 1.4E-13 T 25-04-2017 IPR024937 Domain X GO:0006397 CLFO_RS09355 4a66feee898602753c1b07d0c14f6ab3 603 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 88 366 3.1E-38 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS09355 4a66feee898602753c1b07d0c14f6ab3 603 SUPERFAMILY SSF56672 48 236 4.19E-51 T 25-04-2017 CLFO_RS09355 4a66feee898602753c1b07d0c14f6ab3 603 SUPERFAMILY SSF56672 303 374 4.19E-51 T 25-04-2017 CLFO_RS07035 2b8d5a16fc52499289cccab617b2bde7 66 PRINTS PR00050 Cold shock protein signature 39 57 2.9E-19 T 25-04-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLFO_RS07035 2b8d5a16fc52499289cccab617b2bde7 66 PRINTS PR00050 Cold shock protein signature 24 33 2.9E-19 T 25-04-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLFO_RS07035 2b8d5a16fc52499289cccab617b2bde7 66 PRINTS PR00050 Cold shock protein signature 4 19 2.9E-19 T 25-04-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLFO_RS07035 2b8d5a16fc52499289cccab617b2bde7 66 SUPERFAMILY SSF50249 1 65 3.92E-24 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS07035 2b8d5a16fc52499289cccab617b2bde7 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 25-04-2017 IPR019844 Cold-shock conserved site CLFO_RS07035 2b8d5a16fc52499289cccab617b2bde7 66 PIRSF PIRSF002599 1 66 7.4E-24 T 25-04-2017 IPR012156 Cold shock, CspA GO:0003676 CLFO_RS07035 2b8d5a16fc52499289cccab617b2bde7 66 SMART SM00357 3 66 6.3E-30 T 25-04-2017 IPR011129 Cold shock protein GO:0003676 CLFO_RS07035 2b8d5a16fc52499289cccab617b2bde7 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.7E-29 T 25-04-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CLFO_RS07035 2b8d5a16fc52499289cccab617b2bde7 66 Gene3D G3DSA:2.40.50.140 1 64 7.5E-30 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS12635 58808a4a195c4117e017810e2696e0ec 245 Gene3D G3DSA:3.60.15.10 2 242 2.3E-53 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS12635 58808a4a195c4117e017810e2696e0ec 245 SUPERFAMILY SSF56281 2 241 8.39E-48 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS12635 58808a4a195c4117e017810e2696e0ec 245 SMART SM00849 18 212 3.0E-10 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS12635 58808a4a195c4117e017810e2696e0ec 245 Pfam PF12706 Beta-lactamase superfamily domain 29 213 9.5E-24 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS05305 d20efa763b3747fe5b290f1677b11909 322 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 320 93.994 T 25-04-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CLFO_RS05305 d20efa763b3747fe5b290f1677b11909 322 Pfam PF03186 CobD/Cbib protein 4 295 9.5E-105 T 25-04-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CLFO_RS05305 d20efa763b3747fe5b290f1677b11909 322 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 2 308 4.8E-82 T 25-04-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CLFO_RS18445 d81d99059eb854cc4ba9b2bf74ac0883 280 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 9 279 2.2E-101 T 25-04-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CLFO_RS18445 d81d99059eb854cc4ba9b2bf74ac0883 280 Pfam PF05681 Fumarate hydratase (Fumerase) 10 278 1.1E-115 T 25-04-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 25-04-2017 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 PIRSF PIRSF000099 5 428 1.4E-181 T 25-04-2017 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 31 424 5.6E-175 T 25-04-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 PRINTS PR00083 Histidinol dehydrogenase signature 133 159 2.0E-93 T 25-04-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 PRINTS PR00083 Histidinol dehydrogenase signature 168 194 2.0E-93 T 25-04-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 2.0E-93 T 25-04-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 PRINTS PR00083 Histidinol dehydrogenase signature 31 55 2.0E-93 T 25-04-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 PRINTS PR00083 Histidinol dehydrogenase signature 198 223 2.0E-93 T 25-04-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 2.0E-93 T 25-04-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 PRINTS PR00083 Histidinol dehydrogenase signature 318 343 2.0E-93 T 25-04-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 PRINTS PR00083 Histidinol dehydrogenase signature 359 377 2.0E-93 T 25-04-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 Pfam PF00815 Histidinol dehydrogenase 18 424 7.7E-183 T 25-04-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 425 44.179 T 25-04-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 Gene3D G3DSA:3.40.50.1980 25 237 3.8E-81 T 25-04-2017 CLFO_RS00840 de324f21711ce6d0f88f3e4539ba1b95 430 SUPERFAMILY SSF53720 25 425 1.45E-88 T 25-04-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CLFO_RS02615 a9553dd6f601b2cd62a815a992125588 556 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 17 553 3.9E-215 T 25-04-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS02615 a9553dd6f601b2cd62a815a992125588 556 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 121 131 - T 25-04-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS02615 a9553dd6f601b2cd62a815a992125588 556 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 3 553 42.724 T 25-04-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS02615 a9553dd6f601b2cd62a815a992125588 556 SUPERFAMILY SSF52016 373 552 1.57E-63 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS02615 a9553dd6f601b2cd62a815a992125588 556 SUPERFAMILY SSF143975 2 372 1.03E-130 T 25-04-2017 CLFO_RS02615 a9553dd6f601b2cd62a815a992125588 556 Pfam PF00920 Dehydratase family 33 550 2.5E-213 T 25-04-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CLFO_RS14480 48d08078473fba833f8abdcf36639349 288 SMART SM00382 28 207 3.7E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS14480 48d08078473fba833f8abdcf36639349 288 Gene3D G3DSA:3.40.50.300 2 221 2.4E-50 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14480 48d08078473fba833f8abdcf36639349 288 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS14480 48d08078473fba833f8abdcf36639349 288 SUPERFAMILY SSF52540 3 223 2.82E-50 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14480 48d08078473fba833f8abdcf36639349 288 Pfam PF00005 ABC transporter 19 158 6.5E-26 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS16495 a85c380b81fb6a867b38257214851ba8 511 Gene3D G3DSA:3.40.309.10 315 405 1.5E-23 T 25-04-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLFO_RS16495 a85c380b81fb6a867b38257214851ba8 511 Gene3D G3DSA:3.40.309.10 231 278 1.5E-23 T 25-04-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CLFO_RS16495 a85c380b81fb6a867b38257214851ba8 511 Gene3D G3DSA:3.40.605.10 13 230 1.0E-20 T 25-04-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CLFO_RS16495 a85c380b81fb6a867b38257214851ba8 511 SUPERFAMILY SSF53720 11 448 3.53E-79 T 25-04-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CLFO_RS16495 a85c380b81fb6a867b38257214851ba8 511 Pfam PF00171 Aldehyde dehydrogenase family 13 274 3.1E-22 T 25-04-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CLFO_RS16495 a85c380b81fb6a867b38257214851ba8 511 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 5 508 4.7E-235 T 25-04-2017 IPR013357 Acetaldehyde dehydrogenase, acetylating CLFO_RS02240 c508567cb8c48ca7a9ac392dcdb98f5b 333 Pfam PF00793 DAHP synthetase I family 86 322 4.3E-76 T 25-04-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CLFO_RS02240 c508567cb8c48ca7a9ac392dcdb98f5b 333 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 71 327 1.2E-125 T 25-04-2017 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CLFO_RS02240 c508567cb8c48ca7a9ac392dcdb98f5b 333 Gene3D G3DSA:3.30.70.1140 1 70 7.8E-23 T 25-04-2017 CLFO_RS02240 c508567cb8c48ca7a9ac392dcdb98f5b 333 SUPERFAMILY SSF51569 1 329 9.16E-116 T 25-04-2017 CLFO_RS02240 c508567cb8c48ca7a9ac392dcdb98f5b 333 Gene3D G3DSA:3.20.20.70 72 329 1.0E-101 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS16235 dc362d9cded1d412dfac29fcc4079c78 572 PRINTS PR00723 Subtilisin serine protease family (S8) signature 395 411 7.6E-14 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS16235 dc362d9cded1d412dfac29fcc4079c78 572 PRINTS PR00723 Subtilisin serine protease family (S8) signature 231 244 7.6E-14 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS16235 dc362d9cded1d412dfac29fcc4079c78 572 PRINTS PR00723 Subtilisin serine protease family (S8) signature 181 200 7.6E-14 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS16235 dc362d9cded1d412dfac29fcc4079c78 572 SUPERFAMILY SSF52743 149 453 2.09E-65 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS16235 dc362d9cded1d412dfac29fcc4079c78 572 Gene3D G3DSA:3.40.50.200 146 455 1.5E-74 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS16235 dc362d9cded1d412dfac29fcc4079c78 572 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 396 406 - T 25-04-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site CLFO_RS16235 dc362d9cded1d412dfac29fcc4079c78 572 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 235 245 - T 25-04-2017 IPR022398 Peptidase S8, subtilisin, His-active site CLFO_RS16235 dc362d9cded1d412dfac29fcc4079c78 572 Pfam PF00082 Subtilase family 181 433 1.5E-41 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS03145 15a6dd601c1fa748047922e1941be90b 327 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 6 256 1.8E-56 T 25-04-2017 IPR008275 CoA enzyme activase CLFO_RS03145 15a6dd601c1fa748047922e1941be90b 327 Gene3D G3DSA:3.30.420.40 3 66 1.1E-4 T 25-04-2017 CLFO_RS03145 15a6dd601c1fa748047922e1941be90b 327 Gene3D G3DSA:3.30.420.40 100 239 4.9E-52 T 25-04-2017 CLFO_RS03145 15a6dd601c1fa748047922e1941be90b 327 SUPERFAMILY SSF53067 5 257 1.5E-45 T 25-04-2017 CLFO_RS03145 15a6dd601c1fa748047922e1941be90b 327 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 257 1.8E-51 T 25-04-2017 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLFO_RS07550 37efedd24b5c5c054cef33f30af4071d 421 Pfam PF14257 Domain of unknown function (DUF4349) 146 407 6.2E-57 T 25-04-2017 IPR025645 Domain of unknown function DUF4349 CLFO_RS07550 37efedd24b5c5c054cef33f30af4071d 421 Pfam PF13490 Putative zinc-finger 3 36 3.3E-7 T 25-04-2017 IPR027383 Putative zinc-finger CLFO_RS04450 dae38bd02ec860b1683ead39045fbc23 278 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 76 85 - T 25-04-2017 IPR024002 Formate/nitrite transporter, conserved site CLFO_RS04450 dae38bd02ec860b1683ead39045fbc23 278 Pfam PF01226 Formate/nitrite transporter 13 249 1.1E-70 T 25-04-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CLFO_RS04450 dae38bd02ec860b1683ead39045fbc23 278 Gene3D G3DSA:1.20.1080.10 23 251 3.1E-71 T 25-04-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CLFO_RS04450 dae38bd02ec860b1683ead39045fbc23 278 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 159 169 - T 25-04-2017 IPR024002 Formate/nitrite transporter, conserved site CLFO_RS17780 492327488fee56ee8837b80e9f7599e8 160 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 24 154 5.7E-14 T 25-04-2017 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase CLFO_RS02025 ea720676002d64a48525d871b2cb7b8a 475 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 14 456 1.8E-165 T 25-04-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CLFO_RS02025 ea720676002d64a48525d871b2cb7b8a 475 PIRSF PIRSF000485 10 471 3.9E-181 T 25-04-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CLFO_RS02025 ea720676002d64a48525d871b2cb7b8a 475 Pfam PF00156 Phosphoribosyl transferase domain 273 385 2.8E-9 T 25-04-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLFO_RS02025 ea720676002d64a48525d871b2cb7b8a 475 Gene3D G3DSA:3.60.20.10 14 257 2.7E-70 T 25-04-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CLFO_RS02025 ea720676002d64a48525d871b2cb7b8a 475 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 13 457 48.571 T 25-04-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CLFO_RS02025 ea720676002d64a48525d871b2cb7b8a 475 SUPERFAMILY SSF53271 250 461 1.25E-69 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS02025 ea720676002d64a48525d871b2cb7b8a 475 Gene3D G3DSA:3.40.50.2020 270 437 8.0E-45 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS02025 ea720676002d64a48525d871b2cb7b8a 475 Pfam PF13522 Glutamine amidotransferase domain 79 208 2.5E-20 T 25-04-2017 CLFO_RS02025 ea720676002d64a48525d871b2cb7b8a 475 SUPERFAMILY SSF56235 14 240 1.2E-68 T 25-04-2017 IPR029055 Nucleophile aminohydrolases, N-terminal CLFO_RS06560 fb96cf60944a4c431e8d67969f6ad82b 296 Gene3D G3DSA:3.40.50.1820 16 294 2.3E-48 T 25-04-2017 IPR029058 Alpha/Beta hydrolase fold CLFO_RS06560 fb96cf60944a4c431e8d67969f6ad82b 296 SUPERFAMILY SSF53474 38 294 2.13E-43 T 25-04-2017 IPR029058 Alpha/Beta hydrolase fold CLFO_RS06560 fb96cf60944a4c431e8d67969f6ad82b 296 Pfam PF12146 Serine aminopeptidase, S33 57 278 5.1E-14 T 25-04-2017 IPR022742 Serine aminopeptidase, S33 CLFO_RS06325 6f3ae0221be0ea4ee7de0f2726e33093 113 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 106 1.2E-15 T 25-04-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CLFO_RS06325 6f3ae0221be0ea4ee7de0f2726e33093 113 Gene3D G3DSA:1.20.1290.10 2 109 1.4E-21 T 25-04-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 CLFO_RS06325 6f3ae0221be0ea4ee7de0f2726e33093 113 SUPERFAMILY SSF69118 3 111 1.31E-23 T 25-04-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 CLFO_RS05535 e4720423763b3ffebeb3e983ae2bf97c 183 SUPERFAMILY SSF102829 7 92 1.05E-12 T 25-04-2017 IPR007838 Cell division protein ZapA-like CLFO_RS05535 e4720423763b3ffebeb3e983ae2bf97c 183 Pfam PF05164 Cell division protein ZapA 7 102 5.2E-12 T 25-04-2017 IPR007838 Cell division protein ZapA-like CLFO_RS18455 0727c76b4817148072ae92f38240f130 484 Hamap MF_01923 Glutamate mutase epsilon subunit [glmE]. 2 481 55.899 T 25-04-2017 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CLFO_RS18455 0727c76b4817148072ae92f38240f130 484 SUPERFAMILY SSF51703 1 482 1.14E-211 T 25-04-2017 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CLFO_RS18455 0727c76b4817148072ae92f38240f130 484 Gene3D G3DSA:3.90.970.10 417 482 7.3E-34 T 25-04-2017 IPR014714 Glutamate mutase E subunit, C-terminal domain GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CLFO_RS18455 0727c76b4817148072ae92f38240f130 484 TIGRFAM TIGR01503 MthylAspMut_E: methylaspartate mutase, E subunit 3 481 6.2E-249 T 25-04-2017 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CLFO_RS18455 0727c76b4817148072ae92f38240f130 484 Pfam PF06368 Methylaspartate mutase E chain (MutE) 42 481 1.1E-231 T 25-04-2017 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CLFO_RS18455 0727c76b4817148072ae92f38240f130 484 PIRSF PIRSF001495 1 482 5.0E-238 T 25-04-2017 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CLFO_RS18455 0727c76b4817148072ae92f38240f130 484 Gene3D G3DSA:3.20.20.240 1 416 6.4E-198 T 25-04-2017 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 398 43.184 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 Pfam PF00162 Phosphoglycerate kinase 9 388 6.9E-167 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 Gene3D G3DSA:3.40.50.1260 6 184 3.1E-73 T 25-04-2017 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 PIRSF PIRSF000724 1 399 4.8E-154 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 Gene3D G3DSA:3.40.50.1270 185 386 4.9E-92 T 25-04-2017 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 PRINTS PR00477 Phosphoglycerate kinase family signature 35 57 1.1E-96 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 PRINTS PR00477 Phosphoglycerate kinase family signature 374 391 1.1E-96 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 PRINTS PR00477 Phosphoglycerate kinase family signature 115 130 1.1E-96 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 PRINTS PR00477 Phosphoglycerate kinase family signature 13 29 1.1E-96 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 PRINTS PR00477 Phosphoglycerate kinase family signature 173 195 1.1E-96 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 PRINTS PR00477 Phosphoglycerate kinase family signature 196 215 1.1E-96 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 PRINTS PR00477 Phosphoglycerate kinase family signature 318 343 1.1E-96 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 PRINTS PR00477 Phosphoglycerate kinase family signature 351 362 1.1E-96 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 PRINTS PR00477 Phosphoglycerate kinase family signature 143 165 1.1E-96 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 SUPERFAMILY SSF53748 4 398 3.89E-160 T 25-04-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14305 8a3701251707fc730d6285933f4bb9bc 399 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 18 28 - T 25-04-2017 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14610 a2044d9c46621b4d3051e1aba3e1e8b4 144 Pfam PF02254 TrkA-N domain 9 122 2.4E-25 T 25-04-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CLFO_RS14610 a2044d9c46621b4d3051e1aba3e1e8b4 144 Gene3D G3DSA:3.40.50.720 8 139 7.8E-32 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14610 a2044d9c46621b4d3051e1aba3e1e8b4 144 SUPERFAMILY SSF51735 8 139 7.04E-29 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14610 a2044d9c46621b4d3051e1aba3e1e8b4 144 PRINTS PR00335 TrkA potassium uptake protein signature 8 22 1.1E-8 T 25-04-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLFO_RS14610 a2044d9c46621b4d3051e1aba3e1e8b4 144 PRINTS PR00335 TrkA potassium uptake protein signature 79 93 1.1E-8 T 25-04-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLFO_RS14610 a2044d9c46621b4d3051e1aba3e1e8b4 144 PRINTS PR00335 TrkA potassium uptake protein signature 25 39 1.1E-8 T 25-04-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLFO_RS14610 a2044d9c46621b4d3051e1aba3e1e8b4 144 PRINTS PR00335 TrkA potassium uptake protein signature 66 76 1.1E-8 T 25-04-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CLFO_RS06355 ac37598468842df0906b4d4a6a816506 161 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 11 87 2.3E-17 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS06355 ac37598468842df0906b4d4a6a816506 161 Pfam PF07282 Putative transposase DNA-binding domain 62 133 1.8E-6 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS11385 f25221c8ec778e3c6b83f8cffee4d475 349 PIRSF PIRSF006004 2 349 1.1E-131 T 25-04-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS11385 f25221c8ec778e3c6b83f8cffee4d475 349 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 346 4.5E-129 T 25-04-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS11385 f25221c8ec778e3c6b83f8cffee4d475 349 SUPERFAMILY SSF102114 100 280 3.27E-13 T 25-04-2017 CLFO_RS11385 f25221c8ec778e3c6b83f8cffee4d475 349 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 342 71.29 T 25-04-2017 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CLFO_RS11385 f25221c8ec778e3c6b83f8cffee4d475 349 Pfam PF13394 4Fe-4S single cluster domain 111 200 9.0E-7 T 25-04-2017 CLFO_RS11385 f25221c8ec778e3c6b83f8cffee4d475 349 Gene3D G3DSA:3.80.30.10 150 321 2.0E-11 T 25-04-2017 CLFO_RS11385 f25221c8ec778e3c6b83f8cffee4d475 349 Pfam PF04055 Radical SAM superfamily 107 268 4.4E-20 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS08870 cf4bf978de776c1651145736349459c9 237 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 177 2.2E-20 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS08870 cf4bf978de776c1651145736349459c9 237 Gene3D G3DSA:3.40.630.40 2 181 1.0E-23 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS08870 cf4bf978de776c1651145736349459c9 237 SMART SM00646 65 177 8.5E-4 T 25-04-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CLFO_RS08870 cf4bf978de776c1651145736349459c9 237 SUPERFAMILY SSF53187 1 181 5.65E-21 T 25-04-2017 CLFO_RS19965 b17865e474848cc07c88fa317446e260 163 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 1.7E-27 T 25-04-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CLFO_RS19965 b17865e474848cc07c88fa317446e260 163 SUPERFAMILY SSF54534 85 157 6.15E-20 T 25-04-2017 CLFO_RS19965 b17865e474848cc07c88fa317446e260 163 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 157 30.265 T 25-04-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CLFO_RS19965 b17865e474848cc07c88fa317446e260 163 PIRSF PIRSF006092 1 160 2.3E-47 T 25-04-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CLFO_RS19965 b17865e474848cc07c88fa317446e260 163 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 157 6.2E-53 T 25-04-2017 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CLFO_RS19965 b17865e474848cc07c88fa317446e260 163 SUPERFAMILY SSF46557 6 80 6.8E-24 T 25-04-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CLFO_RS19965 b17865e474848cc07c88fa317446e260 163 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 19 50 - T 25-04-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CLFO_RS19965 b17865e474848cc07c88fa317446e260 163 Gene3D G3DSA:3.10.50.30 78 157 4.7E-29 T 25-04-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CLFO_RS19965 b17865e474848cc07c88fa317446e260 163 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 157 1.1E-25 T 25-04-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CLFO_RS19965 b17865e474848cc07c88fa317446e260 163 Gene3D G3DSA:1.10.287.180 4 77 6.1E-28 T 25-04-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CLFO_RS21150 eae77af30c16c645032e27a64d2c3657 186 Gene3D G3DSA:1.10.443.10 10 181 1.7E-27 T 25-04-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS21150 eae77af30c16c645032e27a64d2c3657 186 Pfam PF00589 Phage integrase family 9 173 8.9E-20 T 25-04-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS21150 eae77af30c16c645032e27a64d2c3657 186 SUPERFAMILY SSF56349 6 183 1.09E-34 T 25-04-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLFO_RS05915 129b0c35e68fac17334dc3956f863105 206 PIRSF PIRSF000709 1 201 6.2E-26 T 25-04-2017 CLFO_RS05915 129b0c35e68fac17334dc3956f863105 206 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 199 5.5E-47 T 25-04-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CLFO_RS05915 129b0c35e68fac17334dc3956f863105 206 SMART SM00855 5 160 1.1E-14 T 25-04-2017 IPR013078 Histidine phosphatase superfamily, clade-1 CLFO_RS05915 129b0c35e68fac17334dc3956f863105 206 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 6 185 8.4E-53 T 25-04-2017 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CLFO_RS05915 129b0c35e68fac17334dc3956f863105 206 SUPERFAMILY SSF53254 5 203 1.57E-48 T 25-04-2017 IPR029033 Histidine phosphatase superfamily CLFO_RS05915 129b0c35e68fac17334dc3956f863105 206 Gene3D G3DSA:3.40.50.1240 2 203 2.5E-51 T 25-04-2017 IPR029033 Histidine phosphatase superfamily CLFO_RS10225 165c181fc92beb8498054d86f6180dac 500 SUPERFAMILY SSF102114 194 396 1.44E-31 T 25-04-2017 CLFO_RS10225 165c181fc92beb8498054d86f6180dac 500 Gene3D G3DSA:3.80.30.20 194 396 2.2E-40 T 25-04-2017 IPR023404 Radical SAM, alpha/beta horseshoe CLFO_RS10225 165c181fc92beb8498054d86f6180dac 500 Pfam PF04055 Radical SAM superfamily 197 361 3.8E-19 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS10225 165c181fc92beb8498054d86f6180dac 500 SMART SM00729 188 414 2.1E-22 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 Gene3D G3DSA:1.10.155.10 2 72 3.9E-16 T 25-04-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 Pfam PF01739 CheR methyltransferase, SAM binding domain 74 263 1.3E-61 T 25-04-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 SMART SM00138 6 271 8.2E-91 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 SUPERFAMILY SSF53335 74 270 6.03E-48 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 Gene3D G3DSA:3.40.50.150 73 269 6.6E-67 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 1.1E-40 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 PRINTS PR00996 Glutamate methyltransferase family signature 211 225 1.1E-40 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.1E-40 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 PRINTS PR00996 Glutamate methyltransferase family signature 28 41 1.1E-40 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 PRINTS PR00996 Glutamate methyltransferase family signature 67 79 1.1E-40 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 PRINTS PR00996 Glutamate methyltransferase family signature 230 253 1.1E-40 T 25-04-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 SUPERFAMILY SSF47757 2 73 4.45E-15 T 25-04-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 PIRSF PIRSF000410 2 271 3.3E-95 T 25-04-2017 IPR026024 Chemotaxis protein methyltransferase CheR CLFO_RS18525 c443c8d485d56733536357445ecb15da 271 Pfam PF03705 CheR methyltransferase, all-alpha domain 7 59 7.9E-13 T 25-04-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLFO_RS18465 2117efa338f2eb3ea95e47425e99d611 144 SUPERFAMILY SSF52242 4 133 3.14E-36 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS18465 2117efa338f2eb3ea95e47425e99d611 144 TIGRFAM TIGR01501 MthylAspMutase: methylaspartate mutase, S subunit 2 134 4.1E-66 T 25-04-2017 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CLFO_RS18465 2117efa338f2eb3ea95e47425e99d611 144 Hamap MF_00526 Glutamate mutase sigma subunit [glmS]. 1 136 39.582 T 25-04-2017 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CLFO_RS18465 2117efa338f2eb3ea95e47425e99d611 144 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 3 134 3.4E-17 T 25-04-2017 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CLFO_RS18465 2117efa338f2eb3ea95e47425e99d611 144 Gene3D G3DSA:3.40.50.280 2 133 1.6E-35 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS18465 2117efa338f2eb3ea95e47425e99d611 144 Pfam PF02310 B12 binding domain 5 100 7.4E-14 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS17865 70ac7423f5143f96b83b8f88cfdc25ba 365 TIGRFAM TIGR03609 S_layer_CsaB: polysaccharide pyruvyl transferase CsaB 4 308 6.0E-88 T 25-04-2017 IPR019896 Polysaccharide pyruvyl transferase, CsaB CLFO_RS17865 70ac7423f5143f96b83b8f88cfdc25ba 365 SUPERFAMILY SSF53756 16 272 1.57E-6 T 25-04-2017 CLFO_RS17865 70ac7423f5143f96b83b8f88cfdc25ba 365 Pfam PF04230 Polysaccharide pyruvyl transferase 14 293 4.4E-52 T 25-04-2017 IPR007345 Polysaccharide pyruvyl transferase CLFO_RS05265 221ac4eb7773f03649ef8dc74b8f1168 177 SUPERFAMILY SSF53155 18 91 7.65E-10 T 25-04-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CLFO_RS05265 221ac4eb7773f03649ef8dc74b8f1168 177 Gene3D G3DSA:1.10.10.10 85 172 9.3E-35 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS05265 221ac4eb7773f03649ef8dc74b8f1168 177 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 136 142 - T 25-04-2017 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CLFO_RS05265 221ac4eb7773f03649ef8dc74b8f1168 177 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 87 166 1.1E-32 T 25-04-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CLFO_RS05265 221ac4eb7773f03649ef8dc74b8f1168 177 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 18 82 2.8E-4 T 25-04-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CLFO_RS05265 221ac4eb7773f03649ef8dc74b8f1168 177 Gene3D G3DSA:3.30.160.70 18 83 3.9E-7 T 25-04-2017 CLFO_RS05265 221ac4eb7773f03649ef8dc74b8f1168 177 SUPERFAMILY SSF46767 85 168 2.22E-31 T 25-04-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CLFO_RS05265 221ac4eb7773f03649ef8dc74b8f1168 177 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 86 165 7.9E-35 T 25-04-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CLFO_RS12395 89e6fe685b5430dea755a480f29447f7 60 Pfam PF14006 YqzL-like protein 14 42 7.0E-8 T 25-04-2017 IPR025617 YqzL-like protein CLFO_RS18300 d0118593eade2e75954a4423f0b705ad 385 Pfam PF00999 Sodium/hydrogen exchanger family 9 376 4.4E-23 T 25-04-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CLFO_RS20875 ebeec30e6ce8d88d4735a2a273c31931 188 SUPERFAMILY SSF88946 2 106 2.35E-13 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20875 ebeec30e6ce8d88d4735a2a273c31931 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 180 9.7E-20 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20875 ebeec30e6ce8d88d4735a2a273c31931 188 Gene3D G3DSA:1.10.1740.10 3 105 3.2E-14 T 25-04-2017 CLFO_RS20875 ebeec30e6ce8d88d4735a2a273c31931 188 SUPERFAMILY SSF88659 118 180 9.72E-9 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20875 ebeec30e6ce8d88d4735a2a273c31931 188 Pfam PF04542 Sigma-70 region 2 25 91 2.1E-11 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20875 ebeec30e6ce8d88d4735a2a273c31931 188 Gene3D G3DSA:1.10.10.10 123 180 4.8E-9 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20875 ebeec30e6ce8d88d4735a2a273c31931 188 Pfam PF08281 Sigma-70, region 4 126 176 7.0E-7 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS19850 f3dfef8e0606e8459a103beb6d69a229 214 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 87 94 - T 25-04-2017 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CLFO_RS19850 f3dfef8e0606e8459a103beb6d69a229 214 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 212 4.2E-66 T 25-04-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CLFO_RS19850 f3dfef8e0606e8459a103beb6d69a229 214 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 210 8.9E-68 T 25-04-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CLFO_RS19850 f3dfef8e0606e8459a103beb6d69a229 214 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 1 213 27.085 T 25-04-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CLFO_RS19850 f3dfef8e0606e8459a103beb6d69a229 214 SUPERFAMILY SSF53448 1 211 7.04E-54 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS19850 f3dfef8e0606e8459a103beb6d69a229 214 Gene3D G3DSA:3.90.550.10 1 213 2.6E-68 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00955 9f61b1dbc8c51e5807f0a4c8bc608bd4 216 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 126 3.5E-22 T 25-04-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLFO_RS00955 9f61b1dbc8c51e5807f0a4c8bc608bd4 216 SUPERFAMILY SSF52788 1 117 1.31E-21 T 25-04-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLFO_RS00955 9f61b1dbc8c51e5807f0a4c8bc608bd4 216 Gene3D G3DSA:3.40.50.270 179 215 6.8E-30 T 25-04-2017 CLFO_RS00955 9f61b1dbc8c51e5807f0a4c8bc608bd4 216 Gene3D G3DSA:3.40.50.270 1 100 6.8E-30 T 25-04-2017 CLFO_RS00955 9f61b1dbc8c51e5807f0a4c8bc608bd4 216 SMART SM00226 1 128 1.4E-10 T 25-04-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLFO_RS08290 7a64084f6f98dfd2b13341019359da97 247 Pfam PF02540 NAD synthase 6 240 8.9E-69 T 25-04-2017 IPR022310 NAD/GMP synthase CLFO_RS08290 7a64084f6f98dfd2b13341019359da97 247 Gene3D G3DSA:3.40.50.620 2 242 2.6E-73 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS08290 7a64084f6f98dfd2b13341019359da97 247 TIGRFAM TIGR00552 nadE: NAD+ synthetase 3 242 3.3E-74 T 25-04-2017 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CLFO_RS08290 7a64084f6f98dfd2b13341019359da97 247 SUPERFAMILY SSF52402 2 242 2.26E-70 T 25-04-2017 CLFO_RS08290 7a64084f6f98dfd2b13341019359da97 247 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 1 243 30.741 T 25-04-2017 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 CLFO_RS18295 f8eb1a943d365649029a4d5e0f3ab54b 246 TIGRFAM TIGR02895 spore_sigI: RNA polymerase sigma-I factor 19 235 1.5E-57 T 25-04-2017 IPR014244 RNA polymerase sigma-I type CLFO_RS18295 f8eb1a943d365649029a4d5e0f3ab54b 246 Pfam PF04542 Sigma-70 region 2 32 101 1.3E-8 T 25-04-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS18295 f8eb1a943d365649029a4d5e0f3ab54b 246 PIRSF PIRSF038953 7 245 2.8E-60 T 25-04-2017 IPR014244 RNA polymerase sigma-I type CLFO_RS18295 f8eb1a943d365649029a4d5e0f3ab54b 246 SUPERFAMILY SSF88946 19 100 5.89E-16 T 25-04-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS18295 f8eb1a943d365649029a4d5e0f3ab54b 246 Gene3D G3DSA:1.10.1740.10 11 117 5.3E-9 T 25-04-2017 CLFO_RS18295 f8eb1a943d365649029a4d5e0f3ab54b 246 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 219 8.1E-12 T 25-04-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS02065 27a062edc5704bf5cffc307096bae129 216 SUPERFAMILY SSF161098 7 201 1.96E-45 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS02065 27a062edc5704bf5cffc307096bae129 216 Gene3D G3DSA:1.10.3720.10 8 215 1.2E-39 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS02065 27a062edc5704bf5cffc307096bae129 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 216 6.7E-21 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS06715 ce108360f5070514deb6611d13fb4afd 530 SUPERFAMILY SSF69304 304 500 7.19E-7 T 25-04-2017 CLFO_RS06715 ce108360f5070514deb6611d13fb4afd 530 Gene3D G3DSA:2.120.10.30 299 311 6.8E-8 T 25-04-2017 IPR011042 Six-bladed beta-propeller, TolB-like CLFO_RS06715 ce108360f5070514deb6611d13fb4afd 530 Gene3D G3DSA:2.120.10.30 200 236 6.8E-8 T 25-04-2017 IPR011042 Six-bladed beta-propeller, TolB-like CLFO_RS06715 ce108360f5070514deb6611d13fb4afd 530 Gene3D G3DSA:2.120.10.30 362 464 6.8E-8 T 25-04-2017 IPR011042 Six-bladed beta-propeller, TolB-like CLFO_RS08965 afe0298067a06ac261f686d5f846b558 395 SUPERFAMILY SSF82866 188 382 3.79E-43 T 25-04-2017 CLFO_RS08965 afe0298067a06ac261f686d5f846b558 395 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 141 371 1.1E-75 T 25-04-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLFO_RS08965 afe0298067a06ac261f686d5f846b558 395 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 113 378 4.6E-103 T 25-04-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CLFO_RS08965 afe0298067a06ac261f686d5f846b558 395 Gene3D G3DSA:1.20.1640.10 188 381 9.4E-28 T 25-04-2017 CLFO_RS08965 afe0298067a06ac261f686d5f846b558 395 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 20 393 38.779 T 25-04-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CLFO_RS08965 afe0298067a06ac261f686d5f846b558 395 PRINTS PR00702 Acriflavin resistance protein family signature 280 304 2.3E-10 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS08965 afe0298067a06ac261f686d5f846b558 395 PRINTS PR00702 Acriflavin resistance protein family signature 227 250 2.3E-10 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS08965 afe0298067a06ac261f686d5f846b558 395 PRINTS PR00702 Acriflavin resistance protein family signature 355 378 2.3E-10 T 25-04-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CLFO_RS08965 afe0298067a06ac261f686d5f846b558 395 Pfam PF02355 Protein export membrane protein 210 379 6.4E-18 T 25-04-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLFO_RS14510 8ab13f29f97a9c0268f0f824accd79cc 185 Gene3D G3DSA:2.60.120.10 104 181 2.9E-26 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS14510 8ab13f29f97a9c0268f0f824accd79cc 185 SMART SM00530 9 64 9.3E-16 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS14510 8ab13f29f97a9c0268f0f824accd79cc 185 Gene3D G3DSA:1.10.260.40 6 103 7.7E-26 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS14510 8ab13f29f97a9c0268f0f824accd79cc 185 SUPERFAMILY SSF51182 57 180 1.81E-21 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS14510 8ab13f29f97a9c0268f0f824accd79cc 185 Pfam PF01381 Helix-turn-helix 10 63 4.1E-17 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS14510 8ab13f29f97a9c0268f0f824accd79cc 185 SUPERFAMILY SSF47413 2 70 2.68E-19 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS14510 8ab13f29f97a9c0268f0f824accd79cc 185 Pfam PF07883 Cupin domain 108 176 5.6E-10 T 25-04-2017 IPR013096 Cupin 2, conserved barrel CLFO_RS11065 40368e176ae2b154cbc3b76fe355e650 382 Pfam PF04509 CheC-like family 35 71 4.2E-12 T 25-04-2017 IPR007597 CheC-like protein GO:0016787 CLFO_RS11065 40368e176ae2b154cbc3b76fe355e650 382 Pfam PF04509 CheC-like family 132 167 4.5E-12 T 25-04-2017 IPR007597 CheC-like protein GO:0016787 CLFO_RS11065 40368e176ae2b154cbc3b76fe355e650 382 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 300 375 9.5E-31 T 25-04-2017 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CLFO_RS11065 40368e176ae2b154cbc3b76fe355e650 382 SUPERFAMILY SSF101801 300 380 7.06E-24 T 25-04-2017 IPR001543 Surface presentation of antigen (SpoA) CLFO_RS11065 40368e176ae2b154cbc3b76fe355e650 382 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 304 373 5.5E-24 T 25-04-2017 IPR001543 Surface presentation of antigen (SpoA) CLFO_RS11065 40368e176ae2b154cbc3b76fe355e650 382 PRINTS PR00956 Flagellar motor switch protein FliN signature 349 364 2.8E-25 T 25-04-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CLFO_RS11065 40368e176ae2b154cbc3b76fe355e650 382 PRINTS PR00956 Flagellar motor switch protein FliN signature 303 319 2.8E-25 T 25-04-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CLFO_RS11065 40368e176ae2b154cbc3b76fe355e650 382 PRINTS PR00956 Flagellar motor switch protein FliN signature 336 349 2.8E-25 T 25-04-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CLFO_RS11065 40368e176ae2b154cbc3b76fe355e650 382 PRINTS PR00956 Flagellar motor switch protein FliN signature 320 336 2.8E-25 T 25-04-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CLFO_RS11065 40368e176ae2b154cbc3b76fe355e650 382 Gene3D G3DSA:2.30.330.10 295 381 4.2E-33 T 25-04-2017 CLFO_RS11065 40368e176ae2b154cbc3b76fe355e650 382 Gene3D G3DSA:3.40.1550.10 30 221 1.0E-61 T 25-04-2017 IPR028976 CheC-like domain CLFO_RS11065 40368e176ae2b154cbc3b76fe355e650 382 SUPERFAMILY SSF103039 30 221 4.51E-49 T 25-04-2017 IPR028976 CheC-like domain CLFO_RS04600 60954f47dc4085e0d22cb268f8bad4ec 309 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 5 308 9.8E-65 T 25-04-2017 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 CLFO_RS04600 60954f47dc4085e0d22cb268f8bad4ec 309 Pfam PF02690 Na+/Pi-cotransporter 14 149 2.0E-40 T 25-04-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CLFO_RS04600 60954f47dc4085e0d22cb268f8bad4ec 309 Pfam PF02690 Na+/Pi-cotransporter 160 255 5.4E-16 T 25-04-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CLFO_RS02700 53a5fd543c1400faae51764c72f7a457 472 Pfam PF14478 Domain of unknown function (DUF4430) 204 274 1.3E-10 T 25-04-2017 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 CLFO_RS10525 9e99aaaf5fa9bdfe7d5ee8da889da854 392 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 65 77 - T 25-04-2017 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 CLFO_RS10525 9e99aaaf5fa9bdfe7d5ee8da889da854 392 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 382 4.7E-52 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10525 9e99aaaf5fa9bdfe7d5ee8da889da854 392 Gene3D G3DSA:3.40.50.150 1 146 1.7E-38 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10525 9e99aaaf5fa9bdfe7d5ee8da889da854 392 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 4 381 6.2E-49 T 25-04-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CLFO_RS10525 9e99aaaf5fa9bdfe7d5ee8da889da854 392 Gene3D G3DSA:3.90.120.10 147 234 1.6E-14 T 25-04-2017 CLFO_RS10525 9e99aaaf5fa9bdfe7d5ee8da889da854 392 Gene3D G3DSA:3.90.120.10 319 373 1.6E-14 T 25-04-2017 CLFO_RS10525 9e99aaaf5fa9bdfe7d5ee8da889da854 392 Gene3D G3DSA:3.90.120.10 257 296 5.4E-13 T 25-04-2017 CLFO_RS10525 9e99aaaf5fa9bdfe7d5ee8da889da854 392 SUPERFAMILY SSF53335 302 381 7.56E-57 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10525 9e99aaaf5fa9bdfe7d5ee8da889da854 392 SUPERFAMILY SSF53335 1 183 7.56E-57 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS06600 c8f7fc1c6535f252d3a770af8979c3a2 250 PIRSF PIRSF006755 15 243 1.6E-61 T 25-04-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CLFO_RS06600 c8f7fc1c6535f252d3a770af8979c3a2 250 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 19 190 5.3E-43 T 25-04-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CLFO_RS06600 c8f7fc1c6535f252d3a770af8979c3a2 250 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 15 237 27.949 T 25-04-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CLFO_RS06600 c8f7fc1c6535f252d3a770af8979c3a2 250 Pfam PF13500 AAA domain 17 221 3.0E-43 T 25-04-2017 CLFO_RS06600 c8f7fc1c6535f252d3a770af8979c3a2 250 SUPERFAMILY SSF52540 16 221 2.08E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06600 c8f7fc1c6535f252d3a770af8979c3a2 250 Gene3D G3DSA:3.40.50.300 15 224 6.1E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01855 09b4d8a566f44e1b557d58d17ccaac68 230 Gene3D G3DSA:3.40.50.300 1 226 3.9E-71 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01855 09b4d8a566f44e1b557d58d17ccaac68 230 SUPERFAMILY SSF52540 1 224 8.63E-75 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01855 09b4d8a566f44e1b557d58d17ccaac68 230 SMART SM00382 30 217 7.7E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS01855 09b4d8a566f44e1b557d58d17ccaac68 230 Pfam PF00005 ABC transporter 21 169 3.3E-32 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS01855 09b4d8a566f44e1b557d58d17ccaac68 230 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS02140 fe1f00587743d1341677e5cc8b1057f6 469 SMART SM00387 373 469 5.2E-8 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS02140 fe1f00587743d1341677e5cc8b1057f6 469 Pfam PF12282 Signal transduction histidine kinase 2 145 3.9E-31 T 25-04-2017 IPR022066 Signal transduction histidine kinase CLFO_RS02140 fe1f00587743d1341677e5cc8b1057f6 469 Gene3D G3DSA:3.30.450.20 161 269 4.8E-7 T 25-04-2017 CLFO_RS02140 fe1f00587743d1341677e5cc8b1057f6 469 Gene3D G3DSA:3.30.450.20 76 141 3.0E-4 T 25-04-2017 CLFO_RS02140 fe1f00587743d1341677e5cc8b1057f6 469 Gene3D G3DSA:3.30.565.10 335 467 1.7E-14 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS02140 fe1f00587743d1341677e5cc8b1057f6 469 SUPERFAMILY SSF55785 169 269 4.38E-5 T 25-04-2017 IPR000014 PAS domain CLFO_RS02140 fe1f00587743d1341677e5cc8b1057f6 469 Pfam PF13426 PAS domain 169 261 0.0039 T 25-04-2017 IPR000014 PAS domain CLFO_RS02140 fe1f00587743d1341677e5cc8b1057f6 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 467 1.1E-8 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS02140 fe1f00587743d1341677e5cc8b1057f6 469 Pfam PF07568 Histidine kinase 278 348 1.9E-23 T 25-04-2017 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain CLFO_RS02140 fe1f00587743d1341677e5cc8b1057f6 469 SUPERFAMILY SSF55874 335 464 2.88E-15 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS05250 723060032221da1aef2ab62ce4e9c89f 647 SUPERFAMILY SSF53067 3 195 1.9E-26 T 25-04-2017 CLFO_RS05250 723060032221da1aef2ab62ce4e9c89f 647 Gene3D G3DSA:3.30.420.40 2 142 2.3E-27 T 25-04-2017 CLFO_RS05250 723060032221da1aef2ab62ce4e9c89f 647 SMART SM00842 2 198 2.3E-47 T 25-04-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CLFO_RS05250 723060032221da1aef2ab62ce4e9c89f 647 Gene3D G3DSA:3.30.420.40 206 342 3.0E-25 T 25-04-2017 CLFO_RS05250 723060032221da1aef2ab62ce4e9c89f 647 Pfam PF14450 Cell division protein FtsA 209 339 1.6E-12 T 25-04-2017 CLFO_RS05250 723060032221da1aef2ab62ce4e9c89f 647 SUPERFAMILY SSF53067 206 374 1.98E-26 T 25-04-2017 CLFO_RS17460 1f7eb3e0272d38acd5934d263da14a18 149 SUPERFAMILY SSF56672 40 145 9.34E-11 T 25-04-2017 CLFO_RS03370 a95297c347f5000c73b6cc82045fb4f0 168 Pfam PF01526 Tn3 transposase DDE domain 96 143 1.6E-8 T 25-04-2017 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CLFO_RS13500 68cfe388ab5c0437cf50a7579e604964 190 SUPERFAMILY SSF53335 8 163 2.07E-17 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS13500 68cfe388ab5c0437cf50a7579e604964 190 Pfam PF00398 Ribosomal RNA adenine dimethylase 25 139 2.5E-6 T 25-04-2017 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CLFO_RS13500 68cfe388ab5c0437cf50a7579e604964 190 Gene3D G3DSA:3.40.50.150 24 155 7.1E-15 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS12405 b627e5622227ed4c3aaaa66795160e1d 131 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 25-04-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CLFO_RS12405 b627e5622227ed4c3aaaa66795160e1d 131 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 97 1.8E-17 T 25-04-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CLFO_RS12405 b627e5622227ed4c3aaaa66795160e1d 131 Gene3D G3DSA:3.40.140.10 2 130 2.4E-54 T 25-04-2017 CLFO_RS12405 b627e5622227ed4c3aaaa66795160e1d 131 SUPERFAMILY SSF53927 1 130 8.03E-49 T 25-04-2017 IPR016193 Cytidine deaminase-like GO:0003824 CLFO_RS12405 b627e5622227ed4c3aaaa66795160e1d 131 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 129 6.6E-46 T 25-04-2017 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-73614 CLFO_RS09720 5f60bb2b645df2e78f41c9036dda9a32 295 Pfam PF00348 Polyprenyl synthetase 30 272 4.1E-60 T 25-04-2017 IPR000092 Polyprenyl synthetase GO:0008299 CLFO_RS09720 5f60bb2b645df2e78f41c9036dda9a32 295 SUPERFAMILY SSF48576 1 282 1.98E-85 T 25-04-2017 IPR008949 Isoprenoid synthase domain CLFO_RS09720 5f60bb2b645df2e78f41c9036dda9a32 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 25-04-2017 IPR000092 Polyprenyl synthetase GO:0008299 CLFO_RS09720 5f60bb2b645df2e78f41c9036dda9a32 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 25-04-2017 IPR000092 Polyprenyl synthetase GO:0008299 CLFO_RS09720 5f60bb2b645df2e78f41c9036dda9a32 295 Gene3D G3DSA:1.10.600.10 4 294 4.7E-92 T 25-04-2017 IPR008949 Isoprenoid synthase domain CLFO_RS14875 837ffd785d65dbbbc58e1c115e348982 163 Pfam PF07484 Phage Tail Collar Domain 6 60 1.2E-20 T 25-04-2017 IPR011083 Phage tail collar domain CLFO_RS14875 837ffd785d65dbbbc58e1c115e348982 163 Pfam PF07484 Phage Tail Collar Domain 89 143 2.4E-21 T 25-04-2017 IPR011083 Phage tail collar domain CLFO_RS14875 837ffd785d65dbbbc58e1c115e348982 163 SUPERFAMILY SSF88874 83 146 1.96E-21 T 25-04-2017 CLFO_RS14875 837ffd785d65dbbbc58e1c115e348982 163 Gene3D G3DSA:3.90.1340.10 83 146 1.1E-22 T 25-04-2017 IPR011083 Phage tail collar domain CLFO_RS14875 837ffd785d65dbbbc58e1c115e348982 163 Gene3D G3DSA:3.90.1340.10 1 62 8.7E-23 T 25-04-2017 IPR011083 Phage tail collar domain CLFO_RS14875 837ffd785d65dbbbc58e1c115e348982 163 SUPERFAMILY SSF88874 1 62 1.09E-20 T 25-04-2017 CLFO_RS16035 161602c63deb21fea51fc90cce18b1e5 250 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 248 6.8E-13 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS16035 161602c63deb21fea51fc90cce18b1e5 250 SUPERFAMILY SSF161098 59 241 4.06E-19 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS16035 161602c63deb21fea51fc90cce18b1e5 250 Gene3D G3DSA:1.10.3720.10 58 249 7.2E-15 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS03850 2181147331f80a2e18bb42435273cd8d 355 PIRSF PIRSF016049 1 355 5.7E-118 T 25-04-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CLFO_RS03850 2181147331f80a2e18bb42435273cd8d 355 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 353 4.5E-116 T 25-04-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CLFO_RS03850 2181147331f80a2e18bb42435273cd8d 355 Gene3D G3DSA:3.20.20.150 1 353 8.8E-145 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS03850 2181147331f80a2e18bb42435273cd8d 355 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 355 167.771 T 25-04-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CLFO_RS03850 2181147331f80a2e18bb42435273cd8d 355 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 352 1.1E-146 T 25-04-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CLFO_RS03850 2181147331f80a2e18bb42435273cd8d 355 SUPERFAMILY SSF51658 1 351 6.29E-87 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS03090 c1d9a514cd6c05a03b6fc4358808f0e8 506 SUPERFAMILY SSF48452 373 495 4.27E-18 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS03090 c1d9a514cd6c05a03b6fc4358808f0e8 506 SMART SM00028 378 411 270.0 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS03090 c1d9a514cd6c05a03b6fc4358808f0e8 506 SMART SM00028 422 455 0.01 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS03090 c1d9a514cd6c05a03b6fc4358808f0e8 506 SMART SM00028 456 489 0.0077 T 25-04-2017 IPR019734 Tetratricopeptide repeat GO:0005515 CLFO_RS03090 c1d9a514cd6c05a03b6fc4358808f0e8 506 Gene3D G3DSA:1.25.40.10 373 496 7.5E-19 T 25-04-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CLFO_RS03090 c1d9a514cd6c05a03b6fc4358808f0e8 506 SUPERFAMILY SSF101478 38 353 2.62E-50 T 25-04-2017 IPR005502 ADP-ribosylation/Crystallin J1 CLFO_RS03090 c1d9a514cd6c05a03b6fc4358808f0e8 506 Pfam PF03747 ADP-ribosylglycohydrolase 45 330 2.6E-43 T 25-04-2017 IPR005502 ADP-ribosylation/Crystallin J1 CLFO_RS03090 c1d9a514cd6c05a03b6fc4358808f0e8 506 Pfam PF14559 Tetratricopeptide repeat 432 486 1.1E-6 T 25-04-2017 CLFO_RS01010 591de94889b5e370af3517e72eaf1800 168 Gene3D G3DSA:1.20.5.620 69 126 4.6E-8 T 25-04-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLFO_RS01010 591de94889b5e370af3517e72eaf1800 168 Pfam PF00430 ATP synthase B/B' CF(0) 11 142 1.5E-28 T 25-04-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CLFO_RS01010 591de94889b5e370af3517e72eaf1800 168 Hamap MF_01398 ATP synthase subunit b [atpF]. 6 161 13.585 T 25-04-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CLFO_RS01010 591de94889b5e370af3517e72eaf1800 168 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 15 161 1.2E-31 T 25-04-2017 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 CLFO_RS01010 591de94889b5e370af3517e72eaf1800 168 SUPERFAMILY SSF81573 69 126 4.18E-8 T 25-04-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLFO_RS13060 172ca2cc76809a1ba503be04e668ee27 439 SUPERFAMILY SSF53850 39 432 8.4E-82 T 25-04-2017 CLFO_RS13060 172ca2cc76809a1ba503be04e668ee27 439 Pfam PF13416 Bacterial extracellular solute-binding protein 58 374 3.4E-48 T 25-04-2017 CLFO_RS13060 172ca2cc76809a1ba503be04e668ee27 439 Gene3D G3DSA:3.40.190.10 158 366 2.6E-54 T 25-04-2017 CLFO_RS16835 a875cd873f5793cf49aa8dbc60b622bd 275 Pfam PF01522 Polysaccharide deacetylase 76 200 2.8E-29 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS16835 a875cd873f5793cf49aa8dbc60b622bd 275 Gene3D G3DSA:3.20.20.370 69 273 1.6E-60 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS16835 a875cd873f5793cf49aa8dbc60b622bd 275 SUPERFAMILY SSF88713 72 273 3.46E-55 T 25-04-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLFO_RS11955 cfc50cdfaf8a12db2105870e4754b7a9 276 Pfam PF01578 Cytochrome C assembly protein 72 273 1.0E-55 T 25-04-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CLFO_RS11955 cfc50cdfaf8a12db2105870e4754b7a9 276 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 48 276 1.1E-81 T 25-04-2017 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 CLFO_RS11955 cfc50cdfaf8a12db2105870e4754b7a9 276 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 191 211 3.5E-5 T 25-04-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CLFO_RS11955 cfc50cdfaf8a12db2105870e4754b7a9 276 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 212 232 3.5E-5 T 25-04-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CLFO_RS21380 ff87c2e3c93ba4336300749f1033c2af 380 Pfam PF00266 Aminotransferase class-V 2 368 3.8E-100 T 25-04-2017 IPR000192 Aminotransferase class V domain CLFO_RS21380 ff87c2e3c93ba4336300749f1033c2af 380 Gene3D G3DSA:3.90.1150.10 254 375 1.3E-22 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS21380 ff87c2e3c93ba4336300749f1033c2af 380 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 2 376 6.4E-159 T 25-04-2017 IPR010969 Cysteine desulfurase-related, unknown function CLFO_RS21380 ff87c2e3c93ba4336300749f1033c2af 380 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 190 210 - T 25-04-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLFO_RS21380 ff87c2e3c93ba4336300749f1033c2af 380 SUPERFAMILY SSF53383 1 378 1.09E-108 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS21380 ff87c2e3c93ba4336300749f1033c2af 380 Gene3D G3DSA:3.40.640.10 14 253 1.9E-79 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS21380 ff87c2e3c93ba4336300749f1033c2af 380 PIRSF PIRSF005572 1 380 2.5E-68 T 25-04-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CLFO_RS05575 f5cd3022a950dd7d4a49c63959d08237 261 Pfam PF04018 Domain of unknown function (DUF368) 15 225 3.0E-34 T 25-04-2017 IPR007163 Protein of unknown function DUF368 CLFO_RS11345 2f53be827f95f290e5c837c7cdd2a27b 539 SMART SM01120 36 201 2.4E-64 T 25-04-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLFO_RS11345 2f53be827f95f290e5c837c7cdd2a27b 539 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 539 1.3E-201 T 25-04-2017 IPR019986 DAK2 domain-containing protein YloV CLFO_RS11345 2f53be827f95f290e5c837c7cdd2a27b 539 SUPERFAMILY SSF101473 6 202 3.53E-44 T 25-04-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLFO_RS11345 2f53be827f95f290e5c837c7cdd2a27b 539 Pfam PF13684 Dihydroxyacetone kinase family 231 539 1.2E-119 T 25-04-2017 IPR033470 Uncharacterised protein, DhaK domain CLFO_RS11345 2f53be827f95f290e5c837c7cdd2a27b 539 Pfam PF02734 DAK2 domain 36 198 2.6E-42 T 25-04-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLFO_RS11345 2f53be827f95f290e5c837c7cdd2a27b 539 SMART SM01121 231 539 4.6E-159 T 25-04-2017 IPR033470 Uncharacterised protein, DhaK domain CLFO_RS08935 7058c4fa9ea5f607df78f1c14e2d89f1 372 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 362 58.9 T 25-04-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CLFO_RS08935 7058c4fa9ea5f607df78f1c14e2d89f1 372 Gene3D G3DSA:3.20.20.105 1 369 1.0E-173 T 25-04-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CLFO_RS08935 7058c4fa9ea5f607df78f1c14e2d89f1 372 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 8.7E-180 T 25-04-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CLFO_RS08935 7058c4fa9ea5f607df78f1c14e2d89f1 372 Pfam PF01702 Queuine tRNA-ribosyltransferase 131 364 5.1E-94 T 25-04-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CLFO_RS08935 7058c4fa9ea5f607df78f1c14e2d89f1 372 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 371 3.1E-171 T 25-04-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CLFO_RS08935 7058c4fa9ea5f607df78f1c14e2d89f1 372 SUPERFAMILY SSF51713 1 368 1.44E-165 T 25-04-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 3.3E-42 T 25-04-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 3.3E-42 T 25-04-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 3.3E-42 T 25-04-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 3.3E-42 T 25-04-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 3.3E-42 T 25-04-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 SMART SM00846 3 153 3.7E-100 T 25-04-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 SUPERFAMILY SSF51735 3 169 8.51E-68 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14310 74441543344ec825e2e95415797b704f 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 25-04-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 Gene3D G3DSA:3.40.50.720 3 161 9.0E-80 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS14310 74441543344ec825e2e95415797b704f 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 3.4E-71 T 25-04-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 Gene3D G3DSA:3.30.360.10 162 316 5.0E-78 T 25-04-2017 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 1.4E-141 T 25-04-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 153 1.7E-63 T 25-04-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 SUPERFAMILY SSF55347 153 315 2.38E-73 T 25-04-2017 CLFO_RS14310 74441543344ec825e2e95415797b704f 336 PIRSF PIRSF000149 1 335 5.0E-144 T 25-04-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CLFO_RS13790 1e26242392f280140b59b005864dbd11 306 Gene3D G3DSA:3.40.190.10 94 222 6.6E-23 T 25-04-2017 CLFO_RS13790 1e26242392f280140b59b005864dbd11 306 Pfam PF09084 NMT1/THI5 like 37 228 4.1E-27 T 25-04-2017 IPR015168 SsuA/THI5-like CLFO_RS13790 1e26242392f280140b59b005864dbd11 306 SUPERFAMILY SSF53850 23 239 9.59E-40 T 25-04-2017 CLFO_RS02800 846ebf32e896b777298276cc4c2bf8a8 248 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 5 239 1.0E-45 T 25-04-2017 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 CLFO_RS05135 dacc63040c2545530631109d46760e1f 206 Gene3D G3DSA:3.30.565.40 23 113 4.6E-15 T 25-04-2017 IPR025303 Domain of unknown function DUF4163 CLFO_RS05135 dacc63040c2545530631109d46760e1f 206 Pfam PF11738 Protein of unknown function (DUF3298) 118 189 1.3E-18 T 25-04-2017 IPR021729 Domain of unknown function DUF3298 CLFO_RS05135 dacc63040c2545530631109d46760e1f 206 Pfam PF13739 Domain of unknown function (DUF4163) 23 99 1.8E-10 T 25-04-2017 IPR025303 Domain of unknown function DUF4163 CLFO_RS05135 dacc63040c2545530631109d46760e1f 206 Gene3D G3DSA:3.90.640.20 117 199 7.4E-20 T 25-04-2017 IPR021729 Domain of unknown function DUF3298 CLFO_RS06795 96a1bca82f5a871d8a69bc977713bdc0 243 Gene3D G3DSA:1.10.490.10 81 148 6.7E-4 T 25-04-2017 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CLFO_RS20765 047e25e57c76550362b2a9096bd6e5bb 424 Pfam PF09861 Domain of unknown function (DUF2088) 8 213 7.9E-74 T 25-04-2017 IPR018657 Domain of unknown function DUF2088 CLFO_RS05090 73a2e484586579ddc28fcc486b8e224d 159 SMART SM00471 29 145 1.4E-4 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS05090 73a2e484586579ddc28fcc486b8e224d 159 SUPERFAMILY SSF109604 1 148 3.14E-29 T 25-04-2017 CLFO_RS05090 73a2e484586579ddc28fcc486b8e224d 159 Gene3D G3DSA:1.10.3210.10 1 132 3.3E-26 T 25-04-2017 IPR006674 HD domain CLFO_RS05090 73a2e484586579ddc28fcc486b8e224d 159 Pfam PF01966 HD domain 34 118 6.0E-11 T 25-04-2017 IPR006674 HD domain CLFO_RS03695 b3533a913610d5f8864ce54fea417fda 406 SUPERFAMILY SSF52172 5 146 4.7E-18 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS03695 b3533a913610d5f8864ce54fea417fda 406 Pfam PF00072 Response regulator receiver domain 7 117 1.0E-9 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS03695 b3533a913610d5f8864ce54fea417fda 406 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 200 402 1.7E-29 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS03695 b3533a913610d5f8864ce54fea417fda 406 SMART SM00331 173 402 2.0E-13 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS03695 b3533a913610d5f8864ce54fea417fda 406 SMART SM00448 4 117 5.9E-6 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS03695 b3533a913610d5f8864ce54fea417fda 406 Gene3D G3DSA:3.40.50.2300 7 132 1.7E-18 T 25-04-2017 CLFO_RS20710 2a21dbee40c83303eb1fa11176a4fc27 869 Gene3D G3DSA:3.30.470.20 484 686 7.0E-14 T 25-04-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CLFO_RS20710 2a21dbee40c83303eb1fa11176a4fc27 869 Gene3D G3DSA:3.30.1490.20 294 474 3.1E-32 T 25-04-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CLFO_RS20710 2a21dbee40c83303eb1fa11176a4fc27 869 SUPERFAMILY SSF56059 296 534 7.89E-35 T 25-04-2017 CLFO_RS20710 2a21dbee40c83303eb1fa11176a4fc27 869 SUPERFAMILY SSF56059 616 675 7.89E-35 T 25-04-2017 CLFO_RS20710 2a21dbee40c83303eb1fa11176a4fc27 869 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 299 682 1.8E-52 T 25-04-2017 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CLFO_RS06855 8c9311a5f1df722e990517dd0e8c1e19 336 Gene3D G3DSA:3.40.50.2300 179 328 2.6E-45 T 25-04-2017 CLFO_RS06855 8c9311a5f1df722e990517dd0e8c1e19 336 Pfam PF13407 Periplasmic binding protein domain 56 317 2.3E-54 T 25-04-2017 IPR025997 Periplasmic binding protein CLFO_RS06855 8c9311a5f1df722e990517dd0e8c1e19 336 SUPERFAMILY SSF53822 53 335 9.42E-73 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS06855 8c9311a5f1df722e990517dd0e8c1e19 336 Gene3D G3DSA:3.40.50.2300 52 178 3.4E-32 T 25-04-2017 CLFO_RS04550 93fd55baa50afa7f36600319a92a5956 69 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 7 66 3.9E-27 T 25-04-2017 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLFO_RS04550 93fd55baa50afa7f36600319a92a5956 69 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 45 59 - T 25-04-2017 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLFO_RS04550 93fd55baa50afa7f36600319a92a5956 69 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 22 31 - T 25-04-2017 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLFO_RS14690 7edc6f408f8bfe1b4f159772d099ddcb 261 Pfam PF00005 ABC transporter 22 165 1.3E-28 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS14690 7edc6f408f8bfe1b4f159772d099ddcb 261 Gene3D G3DSA:3.40.50.300 3 229 2.5E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14690 7edc6f408f8bfe1b4f159772d099ddcb 261 SUPERFAMILY SSF52540 5 227 1.2E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14690 7edc6f408f8bfe1b4f159772d099ddcb 261 SMART SM00382 31 214 3.7E-8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS14690 7edc6f408f8bfe1b4f159772d099ddcb 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS09515 7467d3cb2e11863a7e88ec16bd02a39f 219 SUPERFAMILY SSF53335 7 214 8.36E-48 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS09515 7467d3cb2e11863a7e88ec16bd02a39f 219 Pfam PF01596 O-methyltransferase 38 213 9.1E-33 T 25-04-2017 IPR002935 O-methyltransferase, family 3 GO:0008171 CLFO_RS09515 7467d3cb2e11863a7e88ec16bd02a39f 219 Gene3D G3DSA:3.40.50.150 4 214 5.0E-65 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS07645 d1a38789eb5a1664e94cc4621051fe4c 123 Pfam PF13612 Transposase DDE domain 12 78 4.8E-8 T 25-04-2017 IPR025668 Transposase DDE domain CLFO_RS03220 0c248ecc804535839e59ba853bd76ac1 228 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 177 193 1.5E-8 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS03220 0c248ecc804535839e59ba853bd76ac1 228 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 208 1.5E-8 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS03220 0c248ecc804535839e59ba853bd76ac1 228 Gene3D G3DSA:2.60.120.10 3 146 3.3E-39 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS03220 0c248ecc804535839e59ba853bd76ac1 228 SMART SM00419 171 219 3.3E-15 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS03220 0c248ecc804535839e59ba853bd76ac1 228 Pfam PF00027 Cyclic nucleotide-binding domain 32 120 4.5E-23 T 25-04-2017 IPR000595 Cyclic nucleotide-binding domain CLFO_RS03220 0c248ecc804535839e59ba853bd76ac1 228 SUPERFAMILY SSF46785 151 227 8.01E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03220 0c248ecc804535839e59ba853bd76ac1 228 SUPERFAMILY SSF51206 7 146 8.12E-38 T 25-04-2017 IPR018490 Cyclic nucleotide-binding-like CLFO_RS03220 0c248ecc804535839e59ba853bd76ac1 228 SMART SM00100 14 132 1.6E-24 T 25-04-2017 IPR000595 Cyclic nucleotide-binding domain CLFO_RS03220 0c248ecc804535839e59ba853bd76ac1 228 Gene3D G3DSA:1.10.10.10 149 227 7.0E-28 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03220 0c248ecc804535839e59ba853bd76ac1 228 ProSitePatterns PS00042 Crp-type HTH domain signature. 179 202 - T 25-04-2017 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CLFO_RS03220 0c248ecc804535839e59ba853bd76ac1 228 Pfam PF13545 Crp-like helix-turn-helix domain 153 224 6.2E-20 T 25-04-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CLFO_RS16405 9ada857bf15e7e2be3dfc9a75c1910f4 246 Pfam PF03591 AzlC protein 19 158 9.6E-36 T 25-04-2017 IPR011606 Branched-chain amino acid transport, permease CLFO_RS03180 5067d0d7046793fec468ebfe1b0722ff 295 Pfam PF02374 Anion-transporting ATPase 3 284 1.3E-86 T 25-04-2017 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CLFO_RS03180 5067d0d7046793fec468ebfe1b0722ff 295 Gene3D G3DSA:3.40.50.300 2 277 1.0E-65 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03180 5067d0d7046793fec468ebfe1b0722ff 295 SUPERFAMILY SSF52540 2 275 1.17E-48 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS03180 5067d0d7046793fec468ebfe1b0722ff 295 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 7 282 9.4E-77 T 25-04-2017 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 CLFO_RS18020 19ffeb745302a2264f33a083307553d9 296 Pfam PF02666 Phosphatidylserine decarboxylase 87 293 1.2E-63 T 25-04-2017 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CLFO_RS18020 19ffeb745302a2264f33a083307553d9 296 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 73 295 1.1E-48 T 25-04-2017 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CLFO_RS18020 19ffeb745302a2264f33a083307553d9 296 Hamap MF_00663 Phosphatidylserine decarboxylase proenzyme [psd]. 1 295 41.499 T 25-04-2017 IPR033179 Phosphatidylserine decarboxylase, prokaryotic type 2 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CLFO_RS20815 dc29f52863bca65f32a2353830701587 78 Gene3D G3DSA:1.10.1660.10 2 59 1.1E-11 T 25-04-2017 CLFO_RS20815 dc29f52863bca65f32a2353830701587 78 SUPERFAMILY SSF46955 3 50 1.01E-10 T 25-04-2017 IPR009061 Putative DNA-binding domain CLFO_RS20815 dc29f52863bca65f32a2353830701587 78 Pfam PF13411 MerR HTH family regulatory protein 4 53 3.5E-9 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS20815 dc29f52863bca65f32a2353830701587 78 ProSitePatterns PS00397 Site-specific recombinases active site. 63 71 - T 25-04-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CLFO_RS20815 dc29f52863bca65f32a2353830701587 78 SMART SM00422 4 78 0.002 T 25-04-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CLFO_RS05630 59e8d8760826a33ab4595cea6bc83859 310 SUPERFAMILY SSF51717 63 250 3.06E-5 T 25-04-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS05630 59e8d8760826a33ab4595cea6bc83859 310 Pfam PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit 12 294 2.8E-41 T 25-04-2017 IPR016041 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel CLFO_RS12140 f83a6a03cd840e8426d0a4f2960c9d83 157 Gene3D G3DSA:3.90.960.10 1 153 1.4E-43 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS12140 f83a6a03cd840e8426d0a4f2960c9d83 157 SUPERFAMILY SSF55826 4 152 4.97E-35 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS12140 f83a6a03cd840e8426d0a4f2960c9d83 157 Pfam PF04073 Aminoacyl-tRNA editing domain 27 141 6.1E-26 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS06755 687ec2e9debb01cdc4e917cdc7979724 312 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 290 1.6E-36 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS08340 e20158f63be3ed5f3df5a4618b065bec 363 SUPERFAMILY SSF110296 124 354 9.15E-21 T 25-04-2017 CLFO_RS08340 e20158f63be3ed5f3df5a4618b065bec 363 Gene3D G3DSA:2.130.10.140 125 258 3.6E-22 T 25-04-2017 CLFO_RS08340 e20158f63be3ed5f3df5a4618b065bec 363 Gene3D G3DSA:2.130.10.140 305 328 3.6E-22 T 25-04-2017 CLFO_RS13940 039664deca1eb41c517c3dce2533e6ea 339 SUPERFAMILY SSF52540 3 241 7.23E-77 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13940 039664deca1eb41c517c3dce2533e6ea 339 Pfam PF00005 ABC transporter 18 160 1.4E-33 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS13940 039664deca1eb41c517c3dce2533e6ea 339 SUPERFAMILY SSF50331 236 334 2.59E-10 T 25-04-2017 IPR008995 Molybdate/tungstate binding, C-terminal CLFO_RS13940 039664deca1eb41c517c3dce2533e6ea 339 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS13940 039664deca1eb41c517c3dce2533e6ea 339 Gene3D G3DSA:3.40.50.300 3 233 1.7E-73 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13940 039664deca1eb41c517c3dce2533e6ea 339 SMART SM00382 27 209 2.6E-16 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS03985 3a275e634b8d49062c657c983709a069 389 Pfam PF12323 Helix-turn-helix domain 1 46 6.2E-14 T 25-04-2017 IPR021027 Transposase, putative, helix-turn-helix domain CLFO_RS03985 3a275e634b8d49062c657c983709a069 389 Pfam PF07282 Putative transposase DNA-binding domain 315 383 1.5E-19 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS03985 3a275e634b8d49062c657c983709a069 389 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 271 342 7.1E-7 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS03985 3a275e634b8d49062c657c983709a069 389 Pfam PF01385 Probable transposase 180 302 2.6E-15 T 25-04-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 CLFO_RS01205 787b60b374cf45ae7fec1bc432ab1771 82 SMART SM00530 16 78 0.0095 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS01205 787b60b374cf45ae7fec1bc432ab1771 82 Pfam PF01381 Helix-turn-helix 46 78 1.9E-5 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS01205 787b60b374cf45ae7fec1bc432ab1771 82 SUPERFAMILY SSF47413 7 80 6.52E-8 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS01205 787b60b374cf45ae7fec1bc432ab1771 82 Gene3D G3DSA:1.10.260.40 13 80 1.3E-11 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS01005 74ebb115d0a9e580be5dbfde3bded04b 88 Gene3D G3DSA:1.20.20.10 8 82 8.7E-26 T 25-04-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CLFO_RS01005 74ebb115d0a9e580be5dbfde3bded04b 88 SUPERFAMILY SSF81333 9 83 3.66E-20 T 25-04-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLFO_RS01005 74ebb115d0a9e580be5dbfde3bded04b 88 ProSitePatterns PS00605 ATP synthase c subunit signature. 44 65 - T 25-04-2017 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 CLFO_RS01005 74ebb115d0a9e580be5dbfde3bded04b 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 81 6.6E-20 T 25-04-2017 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CLFO_RS01005 74ebb115d0a9e580be5dbfde3bded04b 88 PRINTS PR00124 ATP synthase C subunit signature 37 52 2.6E-20 T 25-04-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CLFO_RS01005 74ebb115d0a9e580be5dbfde3bded04b 88 PRINTS PR00124 ATP synthase C subunit signature 16 35 2.6E-20 T 25-04-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CLFO_RS01005 74ebb115d0a9e580be5dbfde3bded04b 88 PRINTS PR00124 ATP synthase C subunit signature 54 79 2.6E-20 T 25-04-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 CLFO_RS01005 74ebb115d0a9e580be5dbfde3bded04b 88 Pfam PF00137 ATP synthase subunit C 16 78 2.6E-18 T 25-04-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CLFO_RS01005 74ebb115d0a9e580be5dbfde3bded04b 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 14 81 17.182 T 25-04-2017 CLFO_RS16505 00684f6147699e032dc1119033ffae9b 217 SUPERFAMILY SSF51182 101 216 9.55E-22 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS16505 00684f6147699e032dc1119033ffae9b 217 Gene3D G3DSA:2.60.120.10 98 217 6.2E-36 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS16505 00684f6147699e032dc1119033ffae9b 217 Pfam PF06249 Ethanolamine utilisation protein EutQ 72 217 2.8E-32 T 25-04-2017 IPR010424 Ethanolamine utilisation EutQ CLFO_RS04760 1803419bd353906149e78e5bdcfab560 461 Gene3D G3DSA:3.20.20.70 32 294 4.6E-14 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS04760 1803419bd353906149e78e5bdcfab560 461 TIGRFAM TIGR02814 pfaD_fam: PfaD family protein 18 455 3.0E-209 T 25-04-2017 IPR014179 PfaD family protein KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CLFO_RS04760 1803419bd353906149e78e5bdcfab560 461 SUPERFAMILY SSF51395 17 290 1.56E-18 T 25-04-2017 CLFO_RS02255 e227ddda9a8e8ed5dbfa76a5cdb61fe0 339 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 4 333 39.285 T 25-04-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CLFO_RS02255 e227ddda9a8e8ed5dbfa76a5cdb61fe0 339 Gene3D G3DSA:3.40.1030.10 75 335 3.9E-111 T 25-04-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS02255 e227ddda9a8e8ed5dbfa76a5cdb61fe0 339 SUPERFAMILY SSF52418 75 336 1.7E-97 T 25-04-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS02255 e227ddda9a8e8ed5dbfa76a5cdb61fe0 339 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 65 1.7E-20 T 25-04-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS02255 e227ddda9a8e8ed5dbfa76a5cdb61fe0 339 Gene3D G3DSA:1.20.970.10 5 68 1.9E-28 T 25-04-2017 CLFO_RS02255 e227ddda9a8e8ed5dbfa76a5cdb61fe0 339 SUPERFAMILY SSF47648 2 69 9.16E-21 T 25-04-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS02255 e227ddda9a8e8ed5dbfa76a5cdb61fe0 339 Pfam PF00591 Glycosyl transferase family, a/b domain 75 323 2.4E-99 T 25-04-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CLFO_RS02255 e227ddda9a8e8ed5dbfa76a5cdb61fe0 339 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 332 2.1E-134 T 25-04-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CLFO_RS05125 63551a3067147c916ebaba1e02cf7cb2 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 25-04-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLFO_RS05125 63551a3067147c916ebaba1e02cf7cb2 161 SUPERFAMILY SSF55083 2 151 4.05E-52 T 25-04-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLFO_RS05125 63551a3067147c916ebaba1e02cf7cb2 161 Gene3D G3DSA:3.30.70.560 5 153 1.7E-54 T 25-04-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLFO_RS05125 63551a3067147c916ebaba1e02cf7cb2 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 132 5.1E-45 T 25-04-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLFO_RS05125 63551a3067147c916ebaba1e02cf7cb2 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 132 1.1E-38 T 25-04-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CLFO_RS01110 bc060d79315a0c5ffc61401c351a6b66 245 SUPERFAMILY SSF52540 37 228 2.33E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01110 bc060d79315a0c5ffc61401c351a6b66 245 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 18 221 1.2E-69 T 25-04-2017 IPR005702 Exopolysaccharide synthesis protein GO:0045226 CLFO_RS01110 bc060d79315a0c5ffc61401c351a6b66 245 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 40 213 2.3E-25 T 25-04-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLFO_RS01110 bc060d79315a0c5ffc61401c351a6b66 245 Gene3D G3DSA:3.40.50.300 37 224 7.2E-47 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14730 bcd43bad81872aaed4c99bd56ad58051 314 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 308 8.0E-145 T 25-04-2017 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CLFO_RS14730 bcd43bad81872aaed4c99bd56ad58051 314 Gene3D G3DSA:3.40.50.1100 138 311 3.0E-82 T 25-04-2017 CLFO_RS14730 bcd43bad81872aaed4c99bd56ad58051 314 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 25-04-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CLFO_RS14730 bcd43bad81872aaed4c99bd56ad58051 314 SUPERFAMILY SSF53686 3 310 6.02E-106 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS14730 bcd43bad81872aaed4c99bd56ad58051 314 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 308 3.2E-139 T 25-04-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CLFO_RS14730 bcd43bad81872aaed4c99bd56ad58051 314 Gene3D G3DSA:3.40.50.1100 41 137 1.9E-42 T 25-04-2017 CLFO_RS14730 bcd43bad81872aaed4c99bd56ad58051 314 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 297 5.5E-71 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS14285 a941aa9a9b53ec4ada41e0882f4155eb 75 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 5.4E-12 T 25-04-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CLFO_RS14285 a941aa9a9b53ec4ada41e0882f4155eb 75 PRINTS PR01651 Protein-export SecG membrane protein signature 55 75 5.4E-12 T 25-04-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CLFO_RS14285 a941aa9a9b53ec4ada41e0882f4155eb 75 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 5.4E-12 T 25-04-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CLFO_RS14285 a941aa9a9b53ec4ada41e0882f4155eb 75 Pfam PF03840 Preprotein translocase SecG subunit 4 73 9.6E-20 T 25-04-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CLFO_RS14285 a941aa9a9b53ec4ada41e0882f4155eb 75 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 2.0E-19 T 25-04-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CLFO_RS16625 fbec9708564de90186f1ccb96159cb99 311 ProDom PD128584 YPHB BH1976 TRANSMEMBRANE MEMBRANE SEAA 16 277 2.0E-139 T 25-04-2017 CLFO_RS16625 fbec9708564de90186f1ccb96159cb99 311 Pfam PF14045 YIEGIA protein 16 297 3.4E-102 T 25-04-2017 IPR025918 YIEGIA protein CLFO_RS20435 9d785191b6afd9eaee406cd42884cf21 430 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 7 425 9.1E-211 T 25-04-2017 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 CLFO_RS20435 9d785191b6afd9eaee406cd42884cf21 430 PIRSF PIRSF001434 1 428 7.4E-135 T 25-04-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLFO_RS20435 9d785191b6afd9eaee406cd42884cf21 430 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 425 8.6E-150 T 25-04-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLFO_RS20435 9d785191b6afd9eaee406cd42884cf21 430 Gene3D G3DSA:3.40.640.10 7 289 2.9E-127 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS20435 9d785191b6afd9eaee406cd42884cf21 430 Gene3D G3DSA:3.90.1150.10 291 428 5.8E-52 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS20435 9d785191b6afd9eaee406cd42884cf21 430 SUPERFAMILY SSF53383 7 424 7.85E-135 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS20435 9d785191b6afd9eaee406cd42884cf21 430 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 25-04-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CLFO_RS12455 fdc5e24529a0a7a0ced1524114122ef2 431 Gene3D G3DSA:3.90.226.10 166 201 9.3E-19 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS12455 fdc5e24529a0a7a0ced1524114122ef2 431 Gene3D G3DSA:3.90.226.10 29 129 9.3E-19 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS12455 fdc5e24529a0a7a0ced1524114122ef2 431 SUPERFAMILY SSF52096 9 193 1.18E-28 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS12455 fdc5e24529a0a7a0ced1524114122ef2 431 Gene3D G3DSA:2.40.50.140 375 430 4.3E-6 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS12455 fdc5e24529a0a7a0ced1524114122ef2 431 SUPERFAMILY SSF141322 368 430 4.84E-8 T 25-04-2017 CLFO_RS12455 fdc5e24529a0a7a0ced1524114122ef2 431 Pfam PF01957 NfeD-like C-terminal, partner-binding 283 430 4.2E-22 T 25-04-2017 IPR002810 NfeD-like, C-terminal domain CLFO_RS12455 fdc5e24529a0a7a0ced1524114122ef2 431 Pfam PF01972 Serine dehydrogenase proteinase 55 134 5.8E-5 T 25-04-2017 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 CLFO_RS08425 18bc8cefd4d057739b51c39371e0961b 200 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 185 5.3E-64 T 25-04-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CLFO_RS08425 18bc8cefd4d057739b51c39371e0961b 200 PIRSF PIRSF006102 2 199 2.0E-70 T 25-04-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CLFO_RS08425 18bc8cefd4d057739b51c39371e0961b 200 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 3 196 26.135 T 25-04-2017 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CLFO_RS08425 18bc8cefd4d057739b51c39371e0961b 200 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 5 193 9.5E-77 T 25-04-2017 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CLFO_RS19290 b5cecab9bb11f5c953b2b6c775c36cad 437 Pfam PF07613 Protein of unknown function (DUF1576) 266 429 2.4E-58 T 25-04-2017 IPR011470 Protein of unknown function DUF1576 CLFO_RS19290 b5cecab9bb11f5c953b2b6c775c36cad 437 Pfam PF07613 Protein of unknown function (DUF1576) 54 227 3.1E-58 T 25-04-2017 IPR011470 Protein of unknown function DUF1576 CLFO_RS14170 ee7f3425debd0877e77297e2499c7a79 464 SUPERFAMILY SSF143985 217 335 3.66E-37 T 25-04-2017 CLFO_RS14170 ee7f3425debd0877e77297e2499c7a79 464 Gene3D G3DSA:2.40.440.10 341 461 7.1E-16 T 25-04-2017 CLFO_RS14170 ee7f3425debd0877e77297e2499c7a79 464 Pfam PF03734 L,D-transpeptidase catalytic domain 343 460 3.6E-16 T 25-04-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CLFO_RS14170 ee7f3425debd0877e77297e2499c7a79 464 SUPERFAMILY SSF141523 340 461 4.58E-30 T 25-04-2017 CLFO_RS14170 ee7f3425debd0877e77297e2499c7a79 464 Pfam PF12229 Putative peptidoglycan binding domain 83 194 4.8E-16 T 25-04-2017 IPR022029 Putative peptidoglycan binding domain CLFO_RS14170 ee7f3425debd0877e77297e2499c7a79 464 Pfam PF12229 Putative peptidoglycan binding domain 217 317 2.9E-16 T 25-04-2017 IPR022029 Putative peptidoglycan binding domain CLFO_RS11805 b2dc6b580bbbebca5d70662a698142c1 87 Pfam PF03698 Uncharacterised protein family (UPF0180) 5 53 3.3E-11 T 25-04-2017 IPR005370 Uncharacterised protein family UPF0180 CLFO_RS11805 b2dc6b580bbbebca5d70662a698142c1 87 Gene3D G3DSA:3.30.160.180 13 59 7.8E-4 T 25-04-2017 CLFO_RS01115 f4724f22632905fd971457195b9cd25c 269 PIRSF PIRSF016557 1 256 6.3E-84 T 25-04-2017 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 CLFO_RS01115 f4724f22632905fd971457195b9cd25c 269 Gene3D G3DSA:3.20.20.140 1 215 8.0E-12 T 25-04-2017 CLFO_RS01115 f4724f22632905fd971457195b9cd25c 269 SUPERFAMILY SSF89550 1 200 1.77E-17 T 25-04-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLFO_RS00700 15f3f68a6352c8d2346a2f41442a907b 351 SUPERFAMILY SSF51735 1 348 1.02E-93 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS00700 15f3f68a6352c8d2346a2f41442a907b 351 Gene3D G3DSA:3.40.50.720 1 197 5.6E-68 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS00700 15f3f68a6352c8d2346a2f41442a907b 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 335 3.0E-153 T 25-04-2017 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CLFO_RS00700 15f3f68a6352c8d2346a2f41442a907b 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 321 2.5E-98 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS00700 15f3f68a6352c8d2346a2f41442a907b 351 Gene3D G3DSA:3.90.25.10 198 346 3.5E-59 T 25-04-2017 CLFO_RS14145 ba9e3a0cf2ccbf9cfb006ad8024d8566 164 Gene3D G3DSA:3.30.70.20 35 91 2.2E-10 T 25-04-2017 CLFO_RS14145 ba9e3a0cf2ccbf9cfb006ad8024d8566 164 Pfam PF00037 4Fe-4S binding domain 67 82 7.2E-5 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS14145 ba9e3a0cf2ccbf9cfb006ad8024d8566 164 SUPERFAMILY SSF54862 34 91 3.6E-11 T 25-04-2017 CLFO_RS07940 fc462a12d66aeb7d52c1a4fbc56ea243 111 Pfam PF01740 STAS domain 6 107 2.1E-18 T 25-04-2017 IPR002645 STAS domain CLFO_RS07940 fc462a12d66aeb7d52c1a4fbc56ea243 111 Gene3D G3DSA:3.30.750.24 2 109 1.9E-32 T 25-04-2017 IPR002645 STAS domain CLFO_RS07940 fc462a12d66aeb7d52c1a4fbc56ea243 111 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 105 2.0E-28 T 25-04-2017 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 CLFO_RS07940 fc462a12d66aeb7d52c1a4fbc56ea243 111 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 4 108 1.9E-38 T 25-04-2017 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 CLFO_RS07940 fc462a12d66aeb7d52c1a4fbc56ea243 111 SUPERFAMILY SSF52091 1 109 8.37E-26 T 25-04-2017 IPR002645 STAS domain CLFO_RS01445 470fb854e6f2974d11f50b1ff2e9a550 335 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 3 329 9.3E-148 T 25-04-2017 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|KEGG: 00900+2.5.1.10|MetaCyc: PWY-5123|MetaCyc: PWY-6749|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7131|MetaCyc: PWY-7721|MetaCyc: PWY-7736 CLFO_RS01445 470fb854e6f2974d11f50b1ff2e9a550 335 SUPERFAMILY SSF51269 273 334 1.13E-17 T 25-04-2017 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 CLFO_RS01445 470fb854e6f2974d11f50b1ff2e9a550 335 Pfam PF08666 SAF domain 279 333 4.7E-11 T 25-04-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 CLFO_RS01445 470fb854e6f2974d11f50b1ff2e9a550 335 Gene3D G3DSA:3.20.20.70 3 263 4.5E-113 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS01445 470fb854e6f2974d11f50b1ff2e9a550 335 SUPERFAMILY SSF51569 2 287 1.01E-94 T 25-04-2017 CLFO_RS01445 470fb854e6f2974d11f50b1ff2e9a550 335 Gene3D G3DSA:3.90.1210.10 275 334 5.8E-21 T 25-04-2017 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 CLFO_RS01445 470fb854e6f2974d11f50b1ff2e9a550 335 SMART SM00858 277 335 3.4E-7 T 25-04-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 CLFO_RS01445 470fb854e6f2974d11f50b1ff2e9a550 335 Pfam PF03102 NeuB family 23 263 5.9E-105 T 25-04-2017 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 CLFO_RS17480 13cb67f799d6180db18c95613ccd4690 613 SUPERFAMILY SSF53067 253 298 1.12E-5 T 25-04-2017 CLFO_RS17480 13cb67f799d6180db18c95613ccd4690 613 SUPERFAMILY SSF53067 197 225 1.12E-5 T 25-04-2017 CLFO_RS17480 13cb67f799d6180db18c95613ccd4690 613 SUPERFAMILY SSF53067 342 380 1.12E-5 T 25-04-2017 CLFO_RS17480 13cb67f799d6180db18c95613ccd4690 613 SUPERFAMILY SSF54292 3 93 1.21E-20 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS17480 13cb67f799d6180db18c95613ccd4690 613 Pfam PF14574 Domain of unknown function (DUF4445) 195 611 3.4E-147 T 25-04-2017 IPR027980 Protein of unknown function DUF4445 CLFO_RS17480 13cb67f799d6180db18c95613ccd4690 613 Gene3D G3DSA:3.10.20.30 3 96 1.9E-20 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS17480 13cb67f799d6180db18c95613ccd4690 613 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 80 2.1E-11 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS01730 f68e6ef79aa6b12f76e8ef8301be183f 196 PIRSF PIRSF036382 1 194 3.1E-50 T 25-04-2017 IPR008327 Signal transduction response regulator, antiterminator CLFO_RS01730 f68e6ef79aa6b12f76e8ef8301be183f 196 SMART SM01012 132 187 1.1E-21 T 25-04-2017 IPR005561 ANTAR domain GO:0003723 CLFO_RS01730 f68e6ef79aa6b12f76e8ef8301be183f 196 SMART SM00448 5 116 4.9E-27 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS01730 f68e6ef79aa6b12f76e8ef8301be183f 196 Gene3D G3DSA:3.40.50.2300 2 126 6.0E-31 T 25-04-2017 CLFO_RS01730 f68e6ef79aa6b12f76e8ef8301be183f 196 Pfam PF03861 ANTAR domain 135 187 1.2E-19 T 25-04-2017 IPR005561 ANTAR domain GO:0003723 CLFO_RS01730 f68e6ef79aa6b12f76e8ef8301be183f 196 SUPERFAMILY SSF52172 4 187 3.7E-48 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS01730 f68e6ef79aa6b12f76e8ef8301be183f 196 Gene3D G3DSA:1.10.10.10 135 192 1.9E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS01730 f68e6ef79aa6b12f76e8ef8301be183f 196 Pfam PF00072 Response regulator receiver domain 7 116 6.2E-23 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS20525 d4ee78d125aee6ef919415ca362836ae 401 Pfam PF13641 Glycosyltransferase like family 2 40 266 4.3E-34 T 25-04-2017 CLFO_RS20525 d4ee78d125aee6ef919415ca362836ae 401 Gene3D G3DSA:3.90.550.10 40 275 1.4E-36 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS20525 d4ee78d125aee6ef919415ca362836ae 401 SUPERFAMILY SSF53448 37 311 2.39E-50 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS14495 e299335b731a7de1441005cb3d3202d6 252 Gene3D G3DSA:3.40.50.300 3 226 3.1E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14495 e299335b731a7de1441005cb3d3202d6 252 SMART SM00382 34 222 2.3E-6 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS14495 e299335b731a7de1441005cb3d3202d6 252 SUPERFAMILY SSF52540 3 226 3.84E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14495 e299335b731a7de1441005cb3d3202d6 252 Pfam PF00005 ABC transporter 25 173 2.7E-30 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS04905 1efcf80d5512e53a8ff210b042b6c780 249 SUPERFAMILY SSF52540 1 118 1.36E-9 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04905 1efcf80d5512e53a8ff210b042b6c780 249 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 3 114 3.4E-17 T 25-04-2017 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CLFO_RS04905 1efcf80d5512e53a8ff210b042b6c780 249 Gene3D G3DSA:3.40.50.300 1 160 3.7E-28 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04905 1efcf80d5512e53a8ff210b042b6c780 249 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 158 1.2E-22 T 25-04-2017 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CLFO_RS04330 8b6f405400af770c16c0d1280bb1a9ae 247 Pfam PF07136 Protein of unknown function (DUF1385) 109 234 1.4E-18 T 25-04-2017 IPR010787 Protein of unknown function DUF1385 CLFO_RS04330 8b6f405400af770c16c0d1280bb1a9ae 247 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 116 228 8.0E-31 T 25-04-2017 IPR010787 Protein of unknown function DUF1385 CLFO_RS07740 387601aa9ec3b7b086ef63dcc2f03cb0 186 SUPERFAMILY SSF55729 9 182 5.21E-46 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS07740 387601aa9ec3b7b086ef63dcc2f03cb0 186 Pfam PF13302 Acetyltransferase (GNAT) domain 16 156 3.7E-28 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS07740 387601aa9ec3b7b086ef63dcc2f03cb0 186 Gene3D G3DSA:3.40.630.30 8 182 1.3E-48 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS11585 74ca817eb282f9d6d938f8d760ecd42b 75 Pfam PF07508 Recombinase 5 50 2.3E-5 T 25-04-2017 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CLFO_RS05875 c05220807672c9b7271f72e09adfd90e 762 Gene3D G3DSA:1.10.1060.10 290 391 2.4E-11 T 25-04-2017 CLFO_RS05875 c05220807672c9b7271f72e09adfd90e 762 Gene3D G3DSA:1.10.1060.10 6 109 5.4E-21 T 25-04-2017 CLFO_RS05875 c05220807672c9b7271f72e09adfd90e 762 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 353 364 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS05875 c05220807672c9b7271f72e09adfd90e 762 SUPERFAMILY SSF51971 63 225 3.88E-22 T 25-04-2017 CLFO_RS05875 c05220807672c9b7271f72e09adfd90e 762 SUPERFAMILY SSF46548 290 373 3.14E-10 T 25-04-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 CLFO_RS05875 c05220807672c9b7271f72e09adfd90e 762 Pfam PF13450 NAD(P)-binding Rossmann-like domain 113 170 1.0E-9 T 25-04-2017 CLFO_RS05875 c05220807672c9b7271f72e09adfd90e 762 Pfam PF13534 4Fe-4S dicluster domain 303 368 2.0E-10 T 25-04-2017 CLFO_RS05875 c05220807672c9b7271f72e09adfd90e 762 Pfam PF02754 Cysteine-rich domain 537 605 1.7E-4 T 25-04-2017 IPR004017 Cysteine-rich domain CLFO_RS05875 c05220807672c9b7271f72e09adfd90e 762 Pfam PF02754 Cysteine-rich domain 420 502 1.8E-7 T 25-04-2017 IPR004017 Cysteine-rich domain CLFO_RS05875 c05220807672c9b7271f72e09adfd90e 762 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 10 93 3.2E-18 T 25-04-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CLFO_RS05875 c05220807672c9b7271f72e09adfd90e 762 Gene3D G3DSA:3.50.50.60 110 203 5.0E-23 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14225 915b24d5f3f1cbebab159b0a737d3f62 103 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 11 99 1.0E-13 T 25-04-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CLFO_RS14225 915b24d5f3f1cbebab159b0a737d3f62 103 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 6 99 3.9E-7 T 25-04-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CLFO_RS04515 aa8a6e5f851f202356dc87f325c08e6e 176 Pfam PF14277 Domain of unknown function (DUF4364) 13 174 3.0E-48 T 25-04-2017 IPR025374 Protein of unknown function DUF4364 CLFO_RS04515 aa8a6e5f851f202356dc87f325c08e6e 176 Gene3D G3DSA:1.10.10.10 19 94 2.9E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS04515 aa8a6e5f851f202356dc87f325c08e6e 176 SUPERFAMILY SSF46785 13 88 8.17E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06375 a83b07083966ecf26b57794074eda466 383 Gene3D G3DSA:3.30.457.10 36 114 4.2E-21 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS06375 a83b07083966ecf26b57794074eda466 383 SUPERFAMILY SSF53850 141 361 2.18E-27 T 25-04-2017 CLFO_RS06375 a83b07083966ecf26b57794074eda466 383 Gene3D G3DSA:3.40.190.10 323 361 5.1E-14 T 25-04-2017 CLFO_RS06375 a83b07083966ecf26b57794074eda466 383 Gene3D G3DSA:3.40.190.10 142 219 5.1E-14 T 25-04-2017 CLFO_RS06375 a83b07083966ecf26b57794074eda466 383 Pfam PF12849 PBP superfamily domain 147 353 6.2E-27 T 25-04-2017 IPR024370 PBP domain CLFO_RS06375 a83b07083966ecf26b57794074eda466 383 Gene3D G3DSA:3.40.190.10 220 322 1.5E-34 T 25-04-2017 CLFO_RS06375 a83b07083966ecf26b57794074eda466 383 Pfam PF07833 Copper amine oxidase N-terminal domain 33 124 8.7E-23 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS06375 a83b07083966ecf26b57794074eda466 383 SUPERFAMILY SSF55383 36 118 1.83E-19 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 Pfam PF01316 Arginine repressor, DNA binding domain 2 67 5.9E-25 T 25-04-2017 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 Pfam PF02863 Arginine repressor, C-terminal domain 79 145 8.7E-27 T 25-04-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 PRINTS PR01467 Bacterial arginine repressor signature 36 51 2.5E-24 T 25-04-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 PRINTS PR01467 Bacterial arginine repressor signature 117 132 2.5E-24 T 25-04-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 PRINTS PR01467 Bacterial arginine repressor signature 20 33 2.5E-24 T 25-04-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 PRINTS PR01467 Bacterial arginine repressor signature 87 100 2.5E-24 T 25-04-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 SUPERFAMILY SSF55252 79 147 1.83E-18 T 25-04-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 61.919 T 25-04-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 Gene3D G3DSA:3.30.1360.40 72 148 6.3E-28 T 25-04-2017 IPR024946 Arginine repressor C-terminal-like domain CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 142 7.0E-7 T 25-04-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 SUPERFAMILY SSF46785 2 74 5.63E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 Gene3D G3DSA:1.10.10.10 8 64 1.2E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09750 e3a5968c1d54dad6a5617dc51c38db36 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 4 148 1.1E-47 T 25-04-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 CLFO_RS18850 2a8b3877c0223b10bbe00abba70cad73 73 SUPERFAMILY SSF143422 1 71 2.88E-20 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS18850 2a8b3877c0223b10bbe00abba70cad73 73 Pfam PF01797 Transposase IS200 like 1 70 1.5E-19 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS18850 2a8b3877c0223b10bbe00abba70cad73 73 Gene3D G3DSA:3.30.70.1290 1 71 1.2E-21 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS18850 2a8b3877c0223b10bbe00abba70cad73 73 SMART SM01321 1 70 0.0037 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS18460 d0c80e6603946a39c4cb92a7acdb8e87 462 SUPERFAMILY SSF53067 7 83 6.34E-5 T 25-04-2017 CLFO_RS18460 d0c80e6603946a39c4cb92a7acdb8e87 462 SUPERFAMILY SSF53067 227 275 6.34E-5 T 25-04-2017 CLFO_RS18460 d0c80e6603946a39c4cb92a7acdb8e87 462 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 7 460 1.5E-177 T 25-04-2017 IPR006230 Protein MutL CLFO_RS18460 d0c80e6603946a39c4cb92a7acdb8e87 462 PIRSF PIRSF004729 1 461 3.2E-196 T 25-04-2017 IPR006230 Protein MutL CLFO_RS18460 d0c80e6603946a39c4cb92a7acdb8e87 462 Pfam PF13941 MutL protein 4 459 9.5E-173 T 25-04-2017 IPR006230 Protein MutL CLFO_RS18460 d0c80e6603946a39c4cb92a7acdb8e87 462 Gene3D G3DSA:3.30.420.40 253 283 1.8E-4 T 25-04-2017 CLFO_RS02750 f5af2fb2e004675674aded3a5de89481 517 SUPERFAMILY SSF51445 214 404 1.1E-45 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS02750 f5af2fb2e004675674aded3a5de89481 517 SUPERFAMILY SSF51445 466 501 1.1E-45 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS02750 f5af2fb2e004675674aded3a5de89481 517 ProSitePatterns PS01095 Chitinases family 18 active site. 292 300 - T 25-04-2017 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 CLFO_RS02750 f5af2fb2e004675674aded3a5de89481 517 Pfam PF00704 Glycosyl hydrolases family 18 254 490 4.4E-26 T 25-04-2017 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 CLFO_RS02750 f5af2fb2e004675674aded3a5de89481 517 SMART SM00636 195 494 1.3E-12 T 25-04-2017 IPR011583 Chitinase II GO:0004568|GO:0006032 CLFO_RS02750 f5af2fb2e004675674aded3a5de89481 517 Gene3D G3DSA:3.20.20.80 216 506 1.2E-38 T 25-04-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLFO_RS01255 ed31cb241de5278f854205399b91d92c 259 SUPERFAMILY SSF55781 73 248 4.64E-42 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS01255 ed31cb241de5278f854205399b91d92c 259 Pfam PF01614 Bacterial transcriptional regulator 124 245 8.5E-28 T 25-04-2017 IPR014757 Transcription regulator IclR, C-terminal CLFO_RS01255 ed31cb241de5278f854205399b91d92c 259 SUPERFAMILY SSF46785 8 80 2.93E-16 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS01255 ed31cb241de5278f854205399b91d92c 259 Pfam PF09339 IclR helix-turn-helix domain 9 56 2.2E-11 T 25-04-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CLFO_RS01255 ed31cb241de5278f854205399b91d92c 259 Gene3D G3DSA:3.30.450.40 78 248 3.9E-48 T 25-04-2017 IPR029016 GAF domain-like CLFO_RS01255 ed31cb241de5278f854205399b91d92c 259 SMART SM00346 6 96 5.2E-7 T 25-04-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CLFO_RS01255 ed31cb241de5278f854205399b91d92c 259 Gene3D G3DSA:1.10.10.10 6 77 1.5E-18 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS02215 3fb68148a8246fd2efe8c9a5b1eef03c 209 Pfam PF00753 Metallo-beta-lactamase superfamily 13 179 9.9E-31 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS02215 3fb68148a8246fd2efe8c9a5b1eef03c 209 SUPERFAMILY SSF56281 1 193 1.31E-54 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS02215 3fb68148a8246fd2efe8c9a5b1eef03c 209 SMART SM00849 12 191 3.6E-41 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS02215 3fb68148a8246fd2efe8c9a5b1eef03c 209 Gene3D G3DSA:3.60.15.10 3 195 1.6E-57 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS00830 b3a3ef57491433f2c5e58251f479053b 405 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 14 326 9.0E-102 T 25-04-2017 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 CLFO_RS00830 b3a3ef57491433f2c5e58251f479053b 405 SUPERFAMILY SSF55681 8 323 2.11E-61 T 25-04-2017 CLFO_RS00830 b3a3ef57491433f2c5e58251f479053b 405 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 18 378 30.471 T 25-04-2017 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 CLFO_RS00830 b3a3ef57491433f2c5e58251f479053b 405 PIRSF PIRSF001549 2 399 2.0E-79 T 25-04-2017 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CLFO_RS00830 b3a3ef57491433f2c5e58251f479053b 405 Gene3D G3DSA:3.30.930.10 22 322 3.8E-81 T 25-04-2017 CLFO_RS00830 b3a3ef57491433f2c5e58251f479053b 405 Pfam PF13393 Histidyl-tRNA synthetase 11 321 9.9E-77 T 25-04-2017 CLFO_RS07385 1f97ca2c32f6dfcb176dd181542324a5 256 Pfam PF00574 Clp protease 52 194 3.3E-32 T 25-04-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLFO_RS07385 1f97ca2c32f6dfcb176dd181542324a5 256 PRINTS PR00127 Clp protease catalytic subunit P signature 170 189 5.9E-13 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS07385 1f97ca2c32f6dfcb176dd181542324a5 256 PRINTS PR00127 Clp protease catalytic subunit P signature 93 110 5.9E-13 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS07385 1f97ca2c32f6dfcb176dd181542324a5 256 PRINTS PR00127 Clp protease catalytic subunit P signature 60 80 5.9E-13 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS07385 1f97ca2c32f6dfcb176dd181542324a5 256 Gene3D G3DSA:3.90.226.10 11 200 3.7E-43 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS07385 1f97ca2c32f6dfcb176dd181542324a5 256 SUPERFAMILY SSF52096 11 197 7.69E-44 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS16530 679cdc1cbb10bf4ef1d1ed68106b2ee1 281 SUPERFAMILY SSF53067 143 273 8.03E-28 T 25-04-2017 CLFO_RS16530 679cdc1cbb10bf4ef1d1ed68106b2ee1 281 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 147 160 - T 25-04-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLFO_RS16530 679cdc1cbb10bf4ef1d1ed68106b2ee1 281 SUPERFAMILY SSF53067 32 136 4.92E-11 T 25-04-2017 CLFO_RS16530 679cdc1cbb10bf4ef1d1ed68106b2ee1 281 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 36 274 4.8E-100 T 25-04-2017 IPR013366 Ethanolamine utilisation EutJ CLFO_RS16530 679cdc1cbb10bf4ef1d1ed68106b2ee1 281 Pfam PF11104 Type IV pilus assembly protein PilM; 141 257 1.0E-13 T 25-04-2017 IPR005883 Type IV pilus assembly protein PilM CLFO_RS16530 679cdc1cbb10bf4ef1d1ed68106b2ee1 281 Gene3D G3DSA:3.30.420.40 154 255 3.3E-38 T 25-04-2017 CLFO_RS16530 679cdc1cbb10bf4ef1d1ed68106b2ee1 281 Gene3D G3DSA:3.30.420.40 20 153 2.6E-24 T 25-04-2017 CLFO_RS10885 cdea3bd41ebf53d62e53adccb13e5eff 105 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 92 9.1E-13 T 25-04-2017 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 CLFO_RS10885 cdea3bd41ebf53d62e53adccb13e5eff 105 Gene3D G3DSA:3.30.1330.30 4 94 2.5E-18 T 25-04-2017 IPR029064 50S ribosomal protein L30e-like CLFO_RS10885 cdea3bd41ebf53d62e53adccb13e5eff 105 SUPERFAMILY SSF55315 5 98 5.3E-22 T 25-04-2017 IPR029064 50S ribosomal protein L30e-like CLFO_RS15885 87225d5bc3f9209621cf692fdd77462e 258 Pfam PF08241 Methyltransferase domain 51 146 2.5E-23 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS15885 87225d5bc3f9209621cf692fdd77462e 258 SUPERFAMILY SSF53335 4 164 2.74E-39 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS15885 87225d5bc3f9209621cf692fdd77462e 258 Gene3D G3DSA:3.40.50.150 7 167 8.5E-38 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS17535 2c2c3a98b0c4a0abc6175e4e4d677f6b 268 SUPERFAMILY SSF51717 1 260 4.97E-78 T 25-04-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17535 2c2c3a98b0c4a0abc6175e4e4d677f6b 268 Pfam PF00809 Pterin binding enzyme 6 226 4.1E-22 T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS17535 2c2c3a98b0c4a0abc6175e4e4d677f6b 268 Gene3D G3DSA:3.20.20.20 1 260 1.5E-80 T 25-04-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS11740 db481ed668bdc02eacbd9be2a40e6418 331 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 6 331 23.161 T 25-04-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLFO_RS11740 db481ed668bdc02eacbd9be2a40e6418 331 ProSitePatterns PS01348 MraY family signature 2. 177 188 - T 25-04-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLFO_RS11740 db481ed668bdc02eacbd9be2a40e6418 331 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 18 330 9.6E-99 T 25-04-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLFO_RS11740 db481ed668bdc02eacbd9be2a40e6418 331 Pfam PF00953 Glycosyl transferase family 4 79 257 5.0E-39 T 25-04-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CLFO_RS20820 745473330d5cb5e3e6763b6fcf87f3de 451 Pfam PF02447 GntP family permease 13 449 1.4E-126 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS20820 745473330d5cb5e3e6763b6fcf87f3de 451 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 12 450 6.8E-121 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS20820 745473330d5cb5e3e6763b6fcf87f3de 451 PIRSF PIRSF002746 8 451 7.3E-138 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS12100 763339391061f7c6017e8a9a50f1fa09 218 SUPERFAMILY SSF47644 4 88 1.06E-20 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS12100 763339391061f7c6017e8a9a50f1fa09 218 SUPERFAMILY SSF52242 74 216 1.44E-42 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS12100 763339391061f7c6017e8a9a50f1fa09 218 Pfam PF02310 B12 binding domain 96 208 4.7E-22 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS12100 763339391061f7c6017e8a9a50f1fa09 218 SMART SM01018 6 89 4.1E-25 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS12100 763339391061f7c6017e8a9a50f1fa09 218 Pfam PF02607 B12 binding domain 9 81 5.1E-14 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS12100 763339391061f7c6017e8a9a50f1fa09 218 Gene3D G3DSA:3.40.50.280 80 216 2.7E-47 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS12100 763339391061f7c6017e8a9a50f1fa09 218 Gene3D G3DSA:1.10.1240.10 4 79 2.8E-16 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS02835 0d680b649608a9e9c99c26b1241690c4 590 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 18 140 1.7E-14 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS02835 0d680b649608a9e9c99c26b1241690c4 590 Gene3D G3DSA:3.40.50.300 17 184 8.6E-32 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02835 0d680b649608a9e9c99c26b1241690c4 590 SUPERFAMILY SSF52540 19 190 1.83E-32 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02835 0d680b649608a9e9c99c26b1241690c4 590 Pfam PF07664 Ferrous iron transport protein B C terminus 405 455 6.7E-10 T 25-04-2017 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CLFO_RS02835 0d680b649608a9e9c99c26b1241690c4 590 Pfam PF07670 Nucleoside recognition 467 557 1.6E-9 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS02835 0d680b649608a9e9c99c26b1241690c4 590 Pfam PF07670 Nucleoside recognition 305 397 3.0E-11 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS02835 0d680b649608a9e9c99c26b1241690c4 590 Pfam PF02421 Ferrous iron transport protein B 20 173 8.0E-48 T 25-04-2017 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLFO_RS02835 0d680b649608a9e9c99c26b1241690c4 590 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 42 60 4.6E-5 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS02835 0d680b649608a9e9c99c26b1241690c4 590 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 21 41 4.6E-5 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS10575 b54c20118323bdbbaaf8f762b2154859 246 Gene3D G3DSA:3.60.15.10 7 231 8.0E-27 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS10575 b54c20118323bdbbaaf8f762b2154859 246 SMART SM00849 11 182 0.0047 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS10575 b54c20118323bdbbaaf8f762b2154859 246 SUPERFAMILY SSF56281 1 241 3.93E-30 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS10575 b54c20118323bdbbaaf8f762b2154859 246 Pfam PF12706 Beta-lactamase superfamily domain 41 192 1.3E-11 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS09225 06b0fdc54b1a3a9e564d53ea76b5989b 245 SMART SM00220 22 229 5.3E-5 T 25-04-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLFO_RS09225 06b0fdc54b1a3a9e564d53ea76b5989b 245 SUPERFAMILY SSF56112 26 185 9.44E-22 T 25-04-2017 IPR011009 Protein kinase-like domain CLFO_RS09225 06b0fdc54b1a3a9e564d53ea76b5989b 245 Pfam PF00069 Protein kinase domain 59 177 1.4E-13 T 25-04-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLFO_RS09225 06b0fdc54b1a3a9e564d53ea76b5989b 245 Gene3D G3DSA:1.10.510.10 133 176 7.3E-13 T 25-04-2017 CLFO_RS09225 06b0fdc54b1a3a9e564d53ea76b5989b 245 Gene3D G3DSA:3.30.200.20 37 132 9.4E-8 T 25-04-2017 CLFO_RS09340 265c4244068b736af1079b3c770e83bb 426 SUPERFAMILY SSF103473 18 416 4.19E-45 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS09340 265c4244068b736af1079b3c770e83bb 426 Pfam PF05977 Transmembrane secretion effector 22 420 1.6E-33 T 25-04-2017 IPR010290 Transmembrane secretion effector CLFO_RS09340 265c4244068b736af1079b3c770e83bb 426 Gene3D G3DSA:1.20.1250.20 22 205 1.9E-21 T 25-04-2017 CLFO_RS09340 265c4244068b736af1079b3c770e83bb 426 Gene3D G3DSA:1.20.1250.20 231 418 1.4E-5 T 25-04-2017 CLFO_RS05360 3c54b0631f3024985c3016e0e0e9df4f 291 SUPERFAMILY SSF103481 49 140 3.27E-15 T 25-04-2017 CLFO_RS05360 3c54b0631f3024985c3016e0e0e9df4f 291 Pfam PF00892 EamA-like transporter family 148 272 5.1E-13 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS05360 3c54b0631f3024985c3016e0e0e9df4f 291 Pfam PF00892 EamA-like transporter family 14 137 3.4E-14 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS05360 3c54b0631f3024985c3016e0e0e9df4f 291 SUPERFAMILY SSF103481 184 273 5.1E-10 T 25-04-2017 CLFO_RS03520 437ad26a56f994f5190ae7e63ffd0ad6 161 Pfam PF04986 Putative transposase 2 100 4.0E-30 T 25-04-2017 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CLFO_RS07780 41999a3ea21be777f0eda53fc6a40221 321 Pfam PF13307 Helicase C-terminal domain 137 283 1.9E-22 T 25-04-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CLFO_RS07780 41999a3ea21be777f0eda53fc6a40221 321 SUPERFAMILY SSF52540 257 278 2.2E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07780 41999a3ea21be777f0eda53fc6a40221 321 SUPERFAMILY SSF52540 138 220 2.2E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07780 41999a3ea21be777f0eda53fc6a40221 321 Gene3D G3DSA:3.40.50.300 136 279 1.1E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07780 41999a3ea21be777f0eda53fc6a40221 321 SMART SM00491 154 283 6.2E-12 T 25-04-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CLFO_RS05555 9defa9fb31498f0f226a5ae30d8dde8e 424 Gene3D G3DSA:3.20.20.300 66 396 1.2E-103 T 25-04-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CLFO_RS05555 9defa9fb31498f0f226a5ae30d8dde8e 424 SUPERFAMILY SSF51445 49 418 6.32E-96 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS05555 9defa9fb31498f0f226a5ae30d8dde8e 424 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 59 386 1.5E-91 T 25-04-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 Pfam PF00082 Subtilase family 533 785 4.1E-41 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 Gene3D G3DSA:2.60.120.380 385 496 9.6E-8 T 25-04-2017 CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 Gene3D G3DSA:2.60.120.380 277 382 7.6E-8 T 25-04-2017 CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 Gene3D G3DSA:2.60.120.380 153 267 1.6E-13 T 25-04-2017 CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 SUPERFAMILY SSF89260 154 256 3.66E-6 T 25-04-2017 CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 SUPERFAMILY SSF52743 501 807 5.76E-65 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 PRINTS PR00723 Subtilisin serine protease family (S8) signature 747 763 2.8E-13 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 PRINTS PR00723 Subtilisin serine protease family (S8) signature 533 552 2.8E-13 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 PRINTS PR00723 Subtilisin serine protease family (S8) signature 583 596 2.8E-13 T 25-04-2017 IPR015500 Peptidase S8, subtilisin-related CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 748 758 - T 25-04-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 SUPERFAMILY SSF89260 386 495 5.36E-5 T 25-04-2017 CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 587 597 - T 25-04-2017 IPR022398 Peptidase S8, subtilisin, His-active site CLFO_RS16225 0a7de91a7f793d828afd170d94de8169 924 Gene3D G3DSA:3.40.50.200 498 807 1.8E-74 T 25-04-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CLFO_RS07375 c55f4bbdd857a8d58dd9064306e67767 522 Pfam PF03354 Phage Terminase 34 499 3.4E-75 T 25-04-2017 IPR005021 Phage terminase CLFO_RS20040 e5606a35b0b84bd11213f4baf0f01f98 380 Pfam PF02926 THUMP domain 15 154 1.6E-11 T 25-04-2017 IPR004114 THUMP domain GO:0003723 CLFO_RS20040 e5606a35b0b84bd11213f4baf0f01f98 380 Gene3D G3DSA:3.40.50.150 252 374 3.8E-28 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS20040 e5606a35b0b84bd11213f4baf0f01f98 380 Gene3D G3DSA:3.40.50.150 145 215 3.8E-28 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS20040 e5606a35b0b84bd11213f4baf0f01f98 380 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 25-04-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLFO_RS20040 e5606a35b0b84bd11213f4baf0f01f98 380 SUPERFAMILY SSF53335 255 373 1.5E-37 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS20040 e5606a35b0b84bd11213f4baf0f01f98 380 SUPERFAMILY SSF53335 144 218 1.5E-37 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS20040 e5606a35b0b84bd11213f4baf0f01f98 380 Pfam PF01170 Putative RNA methylase family UPF0020 163 368 4.8E-56 T 25-04-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS20040 e5606a35b0b84bd11213f4baf0f01f98 380 SMART SM00981 58 155 5.1E-7 T 25-04-2017 IPR004114 THUMP domain GO:0003723 CLFO_RS20040 e5606a35b0b84bd11213f4baf0f01f98 380 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 196 207 - T 25-04-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CLFO_RS04095 2c16b553a87f812218d96b7a72096e47 403 Pfam PF00872 Transposase, Mutator family 14 381 1.9E-119 T 25-04-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLFO_RS04095 2c16b553a87f812218d96b7a72096e47 403 ProSitePatterns PS01007 Transposases, Mutator family, signature. 235 259 - T 25-04-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLFO_RS15425 2c16b553a87f812218d96b7a72096e47 403 Pfam PF00872 Transposase, Mutator family 14 381 1.9E-119 T 25-04-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLFO_RS15425 2c16b553a87f812218d96b7a72096e47 403 ProSitePatterns PS01007 Transposases, Mutator family, signature. 235 259 - T 25-04-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLFO_RS13265 2c16b553a87f812218d96b7a72096e47 403 Pfam PF00872 Transposase, Mutator family 14 381 1.9E-119 T 25-04-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLFO_RS13265 2c16b553a87f812218d96b7a72096e47 403 ProSitePatterns PS01007 Transposases, Mutator family, signature. 235 259 - T 25-04-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLFO_RS18215 1de77935201cb52b3ac45fb172111a12 510 PIRSF PIRSF005690 28 510 7.6E-164 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS18215 1de77935201cb52b3ac45fb172111a12 510 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 43 503 4.2E-169 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS11770 27239511f17263a9baa4d63e7fc6a0ab 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 2.5E-22 T 25-04-2017 IPR020603 MraZ domain CLFO_RS11770 27239511f17263a9baa4d63e7fc6a0ab 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 135 2.7E-21 T 25-04-2017 IPR020603 MraZ domain CLFO_RS11770 27239511f17263a9baa4d63e7fc6a0ab 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 141 1.5E-52 T 25-04-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CLFO_RS11770 27239511f17263a9baa4d63e7fc6a0ab 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 1.0E-58 T 25-04-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CLFO_RS11770 27239511f17263a9baa4d63e7fc6a0ab 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 57.187 T 25-04-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CLFO_RS11770 27239511f17263a9baa4d63e7fc6a0ab 143 SUPERFAMILY SSF89447 1 134 7.48E-53 T 25-04-2017 CLFO_RS01770 4d76902c78cc75e928273417a88152fc 431 Gene3D G3DSA:1.20.1250.20 9 202 8.2E-34 T 25-04-2017 CLFO_RS01770 4d76902c78cc75e928273417a88152fc 431 PIRSF PIRSF002808 1 431 1.6E-43 T 25-04-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CLFO_RS01770 4d76902c78cc75e928273417a88152fc 431 Gene3D G3DSA:1.20.1250.20 227 430 8.8E-19 T 25-04-2017 CLFO_RS01770 4d76902c78cc75e928273417a88152fc 431 Pfam PF07690 Major Facilitator Superfamily 20 375 2.2E-41 T 25-04-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLFO_RS01770 4d76902c78cc75e928273417a88152fc 431 SUPERFAMILY SSF103473 4 423 1.83E-70 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS03020 02e55977f97d9ec34067e06bdd821636 194 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 43.939 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS03020 02e55977f97d9ec34067e06bdd821636 194 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 4.4E-54 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS03020 02e55977f97d9ec34067e06bdd821636 194 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 4.4E-54 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS03020 02e55977f97d9ec34067e06bdd821636 194 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 4.4E-54 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS03020 02e55977f97d9ec34067e06bdd821636 194 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 4.4E-54 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS03020 02e55977f97d9ec34067e06bdd821636 194 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 4.4E-54 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS03020 02e55977f97d9ec34067e06bdd821636 194 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 25-04-2017 IPR033135 ClpP, histidine active site CLFO_RS03020 02e55977f97d9ec34067e06bdd821636 194 Gene3D G3DSA:3.90.226.10 3 192 2.2E-88 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS03020 02e55977f97d9ec34067e06bdd821636 194 SUPERFAMILY SSF52096 10 193 1.31E-74 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS03020 02e55977f97d9ec34067e06bdd821636 194 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 25-04-2017 IPR018215 ClpP, Ser active site CLFO_RS03020 02e55977f97d9ec34067e06bdd821636 194 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 191 6.3E-104 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS03020 02e55977f97d9ec34067e06bdd821636 194 Pfam PF00574 Clp protease 13 192 1.9E-87 T 25-04-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLFO_RS02265 45abb84826b9213bd6507c6cff90d5c7 200 SUPERFAMILY SSF51366 3 199 1.37E-55 T 25-04-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLFO_RS02265 45abb84826b9213bd6507c6cff90d5c7 200 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 2 200 37.932 T 25-04-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CLFO_RS02265 45abb84826b9213bd6507c6cff90d5c7 200 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 196 1.0E-54 T 25-04-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CLFO_RS02265 45abb84826b9213bd6507c6cff90d5c7 200 Gene3D G3DSA:3.20.20.70 2 199 1.8E-70 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS07075 96dc061bf6e76b58afe485a68e58b35b 75 Pfam PF12788 YmaF family 8 66 1.5E-14 T 25-04-2017 IPR024307 YmaF CLFO_RS03440 04c99af85332e9dfba2e2311e35bf0a6 1409 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1150 1229 9.7E-24 T 25-04-2017 IPR022385 Rhs repeat-associated core GO:0097264 CLFO_RS03440 04c99af85332e9dfba2e2311e35bf0a6 1409 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 726 755 7.5E-4 T 25-04-2017 IPR006530 YD repeat CLFO_RS03440 04c99af85332e9dfba2e2311e35bf0a6 1409 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 777 814 8.7E-6 T 25-04-2017 IPR006530 YD repeat CLFO_RS03440 04c99af85332e9dfba2e2311e35bf0a6 1409 Pfam PF05593 RHS Repeat 777 808 7.9E-5 T 25-04-2017 IPR031325 RHS repeat CLFO_RS03440 04c99af85332e9dfba2e2311e35bf0a6 1409 Pfam PF05593 RHS Repeat 705 739 6.4E-9 T 25-04-2017 IPR031325 RHS repeat CLFO_RS18690 4d5f277eae427b972cb897d554b7e61c 468 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 314 422 4.4E-20 T 25-04-2017 IPR025299 CstA, C-terminal domain CLFO_RS18690 4d5f277eae427b972cb897d554b7e61c 468 Pfam PF02554 Carbon starvation protein CstA 156 284 3.1E-18 T 25-04-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CLFO_RS18690 4d5f277eae427b972cb897d554b7e61c 468 Pfam PF02554 Carbon starvation protein CstA 5 143 6.0E-35 T 25-04-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CLFO_RS04425 0c6e56942e920f61808d05bd87b34bbc 517 Pfam PF01943 Polysaccharide biosynthesis protein 7 310 1.3E-28 T 25-04-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLFO_RS04425 0c6e56942e920f61808d05bd87b34bbc 517 PIRSF PIRSF038958 1 514 9.6E-143 T 25-04-2017 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type CLFO_RS04425 0c6e56942e920f61808d05bd87b34bbc 517 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 362 504 5.1E-28 T 25-04-2017 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLFO_RS03715 d2cc8f1c56aace3a2b20ede1681746ae 341 Gene3D G3DSA:3.40.1190.20 1 336 2.4E-98 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS03715 d2cc8f1c56aace3a2b20ede1681746ae 341 SUPERFAMILY SSF53613 1 330 4.99E-88 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS03715 d2cc8f1c56aace3a2b20ede1681746ae 341 Pfam PF00294 pfkB family carbohydrate kinase 2 313 2.6E-40 T 25-04-2017 IPR011611 Carbohydrate kinase PfkB CLFO_RS03010 52d5c7d47797d8b0698bb9b1db2c7daf 329 SUPERFAMILY SSF53822 61 328 7.85E-85 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS03010 52d5c7d47797d8b0698bb9b1db2c7daf 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 1.0E-21 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS03010 52d5c7d47797d8b0698bb9b1db2c7daf 329 SUPERFAMILY SSF47413 2 60 2.02E-19 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS03010 52d5c7d47797d8b0698bb9b1db2c7daf 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 3.4E-6 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS03010 52d5c7d47797d8b0698bb9b1db2c7daf 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 3.4E-6 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS03010 52d5c7d47797d8b0698bb9b1db2c7daf 329 Gene3D G3DSA:3.40.50.2300 171 309 7.3E-49 T 25-04-2017 CLFO_RS03010 52d5c7d47797d8b0698bb9b1db2c7daf 329 Pfam PF13377 Periplasmic binding protein-like domain 167 329 1.2E-33 T 25-04-2017 CLFO_RS03010 52d5c7d47797d8b0698bb9b1db2c7daf 329 SMART SM00354 2 72 8.3E-36 T 25-04-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CLFO_RS03010 52d5c7d47797d8b0698bb9b1db2c7daf 329 Gene3D G3DSA:3.40.50.2300 55 170 4.4E-51 T 25-04-2017 CLFO_RS03010 52d5c7d47797d8b0698bb9b1db2c7daf 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 25-04-2017 CLFO_RS03010 52d5c7d47797d8b0698bb9b1db2c7daf 329 Gene3D G3DSA:1.10.260.40 4 54 1.1E-27 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS06975 a451102720c21fd8d4118c4447e1ad3b 272 PRINTS PR00091 Nitrogenase component II signature 121 136 7.0E-38 T 25-04-2017 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CLFO_RS06975 a451102720c21fd8d4118c4447e1ad3b 272 PRINTS PR00091 Nitrogenase component II signature 82 96 7.0E-38 T 25-04-2017 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CLFO_RS06975 a451102720c21fd8d4118c4447e1ad3b 272 PRINTS PR00091 Nitrogenase component II signature 7 20 7.0E-38 T 25-04-2017 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CLFO_RS06975 a451102720c21fd8d4118c4447e1ad3b 272 PRINTS PR00091 Nitrogenase component II signature 29 44 7.0E-38 T 25-04-2017 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CLFO_RS06975 a451102720c21fd8d4118c4447e1ad3b 272 PIRSF PIRSF000363 1 272 4.8E-125 T 25-04-2017 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CLFO_RS06975 a451102720c21fd8d4118c4447e1ad3b 272 ProSitePatterns PS00746 NifH/frxC family signature 1. 84 96 - T 25-04-2017 IPR030655 NifH/chlL conserved site CLFO_RS06975 a451102720c21fd8d4118c4447e1ad3b 272 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 2 270 5.4E-134 T 25-04-2017 CLFO_RS06975 a451102720c21fd8d4118c4447e1ad3b 272 SUPERFAMILY SSF52540 1 269 3.3E-63 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06975 a451102720c21fd8d4118c4447e1ad3b 272 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 2 270 1.0E-140 T 25-04-2017 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CLFO_RS06975 a451102720c21fd8d4118c4447e1ad3b 272 Hamap MF_00533 Nitrogenase iron protein [nifH]. 1 272 54.195 T 25-04-2017 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CLFO_RS06975 a451102720c21fd8d4118c4447e1ad3b 272 ProSitePatterns PS00692 NifH/frxC family signature 2. 122 135 - T 25-04-2017 IPR030655 NifH/chlL conserved site CLFO_RS06975 a451102720c21fd8d4118c4447e1ad3b 272 Gene3D G3DSA:3.40.50.300 3 268 9.5E-77 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20490 d89f7d0557f3e0bc7fbb7678b7c5fa8f 268 Gene3D G3DSA:3.10.20.30 6 54 8.4E-5 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS20490 d89f7d0557f3e0bc7fbb7678b7c5fa8f 268 Pfam PF00899 ThiF family 77 264 7.7E-32 T 25-04-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLFO_RS20490 d89f7d0557f3e0bc7fbb7678b7c5fa8f 268 SUPERFAMILY SSF69572 72 265 2.75E-44 T 25-04-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLFO_RS20490 d89f7d0557f3e0bc7fbb7678b7c5fa8f 268 Pfam PF14453 ThiS-like ubiquitin 1 57 1.0E-22 T 25-04-2017 IPR032726 ThiS-like ubiquitin domain CLFO_RS20490 d89f7d0557f3e0bc7fbb7678b7c5fa8f 268 Gene3D G3DSA:3.40.50.720 74 265 4.5E-33 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS20490 d89f7d0557f3e0bc7fbb7678b7c5fa8f 268 TIGRFAM TIGR02354 thiF_fam2: thiamine biosynthesis protein ThiF 63 262 2.1E-86 T 25-04-2017 IPR012729 Thiamine biosynthesis protein ThiF CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 Pfam PF00117 Glutamine amidotransferase class-I 175 350 4.3E-48 T 25-04-2017 IPR017926 Glutamine amidotransferase CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 354 2.4E-154 T 25-04-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 SUPERFAMILY SSF52317 141 354 4.58E-60 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 Gene3D G3DSA:3.40.50.880 151 355 6.4E-69 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 Gene3D G3DSA:3.50.30.20 2 145 1.5E-63 T 25-04-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 SUPERFAMILY SSF52021 1 145 2.75E-57 T 25-04-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 PRINTS PR00097 Anthranilate synthase component II signature 215 224 9.6E-7 T 25-04-2017 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 PRINTS PR00097 Anthranilate synthase component II signature 328 341 9.6E-7 T 25-04-2017 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 PRINTS PR00097 Anthranilate synthase component II signature 242 253 9.6E-7 T 25-04-2017 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 212 226 1.4E-38 T 25-04-2017 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 259 276 1.4E-38 T 25-04-2017 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 173 187 1.4E-38 T 25-04-2017 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 295 1.4E-38 T 25-04-2017 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 242 258 1.4E-38 T 25-04-2017 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 328 341 5.4E-12 T 25-04-2017 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 242 253 5.4E-12 T 25-04-2017 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 215 224 5.4E-12 T 25-04-2017 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 5.3E-56 T 25-04-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 SMART SM01097 1 131 6.9E-87 T 25-04-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS03940 e1b2cebd5030e2111f666297cf9289e1 360 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 357 48.226 T 25-04-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 CLFO_RS15450 11c7eacb84bdf734d5b7962ac3303ad6 309 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 305 2.9E-113 T 25-04-2017 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CLFO_RS15450 11c7eacb84bdf734d5b7962ac3303ad6 309 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 307 1.8E-105 T 25-04-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLFO_RS15450 11c7eacb84bdf734d5b7962ac3303ad6 309 SUPERFAMILY SSF51569 3 305 2.93E-110 T 25-04-2017 CLFO_RS15450 11c7eacb84bdf734d5b7962ac3303ad6 309 PIRSF PIRSF001359 1 309 2.1E-107 T 25-04-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLFO_RS15450 11c7eacb84bdf734d5b7962ac3303ad6 309 Gene3D G3DSA:3.20.20.70 1 307 9.5E-118 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS15450 11c7eacb84bdf734d5b7962ac3303ad6 309 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 3 303 2.3E-96 T 25-04-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CLFO_RS13390 d474008bee27426de178d5e0d6cc6a69 448 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 47 411 4.1E-112 T 25-04-2017 IPR030931 Group II intron reverse transcriptase/maturase CLFO_RS13390 d474008bee27426de178d5e0d6cc6a69 448 SUPERFAMILY SSF56672 36 355 2.09E-51 T 25-04-2017 CLFO_RS13390 d474008bee27426de178d5e0d6cc6a69 448 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 102 326 6.6E-38 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS13390 d474008bee27426de178d5e0d6cc6a69 448 Pfam PF08388 Group II intron, maturase-specific domain 351 420 4.2E-6 T 25-04-2017 IPR013597 Group II intron, maturase-specific CLFO_RS20565 157799d53143cfc17659a7342503e514 489 SUPERFAMILY SSF53383 28 482 1.28E-116 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS20565 157799d53143cfc17659a7342503e514 489 Gene3D G3DSA:3.40.640.10 85 287 8.0E-32 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS20565 157799d53143cfc17659a7342503e514 489 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 6 484 59.835 T 25-04-2017 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 CLFO_RS20565 157799d53143cfc17659a7342503e514 489 Pfam PF02347 Glycine cleavage system P-protein 30 300 1.5E-14 T 25-04-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CLFO_RS16455 eea8daa7d314de974f9e2fdad0ad18f5 273 Gene3D G3DSA:3.10.310.10 1 150 0.001 T 25-04-2017 CLFO_RS08515 fbe8c46b8654b72a4238c9028c5d4b1c 247 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 5 230 2.4E-64 T 25-04-2017 IPR018768 Domain of unknown function DUF2344 CLFO_RS08515 fbe8c46b8654b72a4238c9028c5d4b1c 247 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 5 203 4.2E-60 T 25-04-2017 IPR018768 Domain of unknown function DUF2344 CLFO_RS18350 483d042089b648c52e191b33ea94e377 164 SUPERFAMILY SSF55826 5 163 2.49E-38 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS18350 483d042089b648c52e191b33ea94e377 164 Pfam PF04073 Aminoacyl-tRNA editing domain 24 150 1.9E-24 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS18350 483d042089b648c52e191b33ea94e377 164 Gene3D G3DSA:3.90.960.10 1 163 6.3E-55 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS19980 5b14c85513a5998399b9ace360fb509a 263 SUPERFAMILY SSF53067 123 254 1.28E-39 T 25-04-2017 CLFO_RS19980 5b14c85513a5998399b9ace360fb509a 263 Gene3D G3DSA:3.30.420.40 94 258 1.2E-55 T 25-04-2017 CLFO_RS19980 5b14c85513a5998399b9ace360fb509a 263 SUPERFAMILY SSF53067 1 122 1.36E-36 T 25-04-2017 CLFO_RS19980 5b14c85513a5998399b9ace360fb509a 263 Pfam PF03309 Type III pantothenate kinase 2 205 1.8E-75 T 25-04-2017 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CLFO_RS19980 5b14c85513a5998399b9ace360fb509a 263 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 255 37.499 T 25-04-2017 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CLFO_RS19980 5b14c85513a5998399b9ace360fb509a 263 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 251 1.6E-80 T 25-04-2017 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CLFO_RS02600 21e9a798ab3d74d2c623e4be92aebc88 426 SUPERFAMILY SSF142764 4 416 4.45E-78 T 25-04-2017 CLFO_RS02600 21e9a798ab3d74d2c623e4be92aebc88 426 Pfam PF07005 Putative sugar-binding N-terminal domain 4 221 1.5E-43 T 25-04-2017 IPR010737 Putative sugar-binding, N-terminal domain CLFO_RS02600 21e9a798ab3d74d2c623e4be92aebc88 426 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 243 409 6.5E-25 T 25-04-2017 IPR031475 Putative nucleotide-binding C-terminal domain CLFO_RS14720 167d178f45f119420f76d99d982d8ded 165 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 150 1.1E-27 T 25-04-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CLFO_RS12360 090f8a717fbf1a7442f8900148e68e3e 295 Pfam PF11155 Domain of unknown function (DUF2935) 19 131 1.6E-20 T 25-04-2017 IPR021328 Protein of unknown function DUF2935 CLFO_RS12360 090f8a717fbf1a7442f8900148e68e3e 295 Pfam PF11155 Domain of unknown function (DUF2935) 175 288 2.7E-16 T 25-04-2017 IPR021328 Protein of unknown function DUF2935 CLFO_RS12360 090f8a717fbf1a7442f8900148e68e3e 295 SUPERFAMILY SSF158430 164 288 5.89E-17 T 25-04-2017 CLFO_RS12360 090f8a717fbf1a7442f8900148e68e3e 295 SUPERFAMILY SSF158430 18 141 3.66E-26 T 25-04-2017 CLFO_RS05420 552060b63dcc4e2f3f74ec989f2d2167 160 Gene3D G3DSA:3.30.70.1150 85 158 7.3E-30 T 25-04-2017 CLFO_RS05420 552060b63dcc4e2f3f74ec989f2d2167 160 Gene3D G3DSA:3.30.70.260 1 78 3.4E-34 T 25-04-2017 CLFO_RS05420 552060b63dcc4e2f3f74ec989f2d2167 160 Pfam PF01842 ACT domain 4 69 2.3E-17 T 25-04-2017 IPR002912 ACT domain GO:0008152|GO:0016597 CLFO_RS05420 552060b63dcc4e2f3f74ec989f2d2167 160 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 157 1.1E-63 T 25-04-2017 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CLFO_RS05420 552060b63dcc4e2f3f74ec989f2d2167 160 SUPERFAMILY SSF55021 3 76 3.06E-23 T 25-04-2017 CLFO_RS05420 552060b63dcc4e2f3f74ec989f2d2167 160 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 77 5.0E-24 T 25-04-2017 CLFO_RS05420 552060b63dcc4e2f3f74ec989f2d2167 160 SUPERFAMILY SSF55021 81 158 3.88E-26 T 25-04-2017 CLFO_RS05420 552060b63dcc4e2f3f74ec989f2d2167 160 Pfam PF10369 Small subunit of acetolactate synthase 85 157 3.0E-28 T 25-04-2017 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CLFO_RS14050 5ecd728672dc21b3ea2ebe37f77c6bff 194 SMART SM00530 9 64 6.0E-13 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS14050 5ecd728672dc21b3ea2ebe37f77c6bff 194 SUPERFAMILY SSF47413 4 71 2.68E-17 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS14050 5ecd728672dc21b3ea2ebe37f77c6bff 194 SUPERFAMILY SSF49367 118 192 4.05E-15 T 25-04-2017 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 CLFO_RS14050 5ecd728672dc21b3ea2ebe37f77c6bff 194 Gene3D G3DSA:1.10.260.40 3 68 9.6E-20 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS14050 5ecd728672dc21b3ea2ebe37f77c6bff 194 Pfam PF01381 Helix-turn-helix 12 63 7.2E-16 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS14050 5ecd728672dc21b3ea2ebe37f77c6bff 194 Gene3D G3DSA:2.60.40.730 79 191 2.2E-26 T 25-04-2017 CLFO_RS18770 a8da735ed18c6e9848e64c3e15bd9e20 541 Pfam PF03050 Transposase IS66 family 191 481 2.6E-89 T 25-04-2017 IPR004291 Transposase, IS66 CLFO_RS18770 a8da735ed18c6e9848e64c3e15bd9e20 541 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 171 4.0E-11 T 25-04-2017 IPR024474 Zinc-finger binding domain of transposase IS66 CLFO_RS17095 a8da735ed18c6e9848e64c3e15bd9e20 541 Pfam PF03050 Transposase IS66 family 191 481 2.6E-89 T 25-04-2017 IPR004291 Transposase, IS66 CLFO_RS17095 a8da735ed18c6e9848e64c3e15bd9e20 541 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 171 4.0E-11 T 25-04-2017 IPR024474 Zinc-finger binding domain of transposase IS66 CLFO_RS13340 a8da735ed18c6e9848e64c3e15bd9e20 541 Pfam PF03050 Transposase IS66 family 191 481 2.6E-89 T 25-04-2017 IPR004291 Transposase, IS66 CLFO_RS13340 a8da735ed18c6e9848e64c3e15bd9e20 541 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 171 4.0E-11 T 25-04-2017 IPR024474 Zinc-finger binding domain of transposase IS66 CLFO_RS11760 acbe2bfa7ca7f2e35125edbf0004bab2 161 Hamap MF_00910 Cell division protein FtsL [ftsL]. 32 117 11.936 T 25-04-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CLFO_RS11760 acbe2bfa7ca7f2e35125edbf0004bab2 161 Pfam PF04999 Cell division protein FtsL 29 117 9.2E-6 T 25-04-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CLFO_RS14070 fb5b8e782abd2d4198a1503655b1f1da 171 Pfam PF00583 Acetyltransferase (GNAT) family 63 141 4.0E-15 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS14070 fb5b8e782abd2d4198a1503655b1f1da 171 Gene3D G3DSA:3.40.630.30 1 164 3.6E-44 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS14070 fb5b8e782abd2d4198a1503655b1f1da 171 SUPERFAMILY SSF55729 1 148 1.21E-30 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS01505 cb322a8fe4cfbd34e8bdc84d48a9f6e7 227 Gene3D G3DSA:3.40.50.10320 3 225 8.1E-53 T 25-04-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 CLFO_RS01505 cb322a8fe4cfbd34e8bdc84d48a9f6e7 227 SUPERFAMILY SSF102588 2 225 2.75E-44 T 25-04-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 CLFO_RS01505 cb322a8fe4cfbd34e8bdc84d48a9f6e7 227 Pfam PF02585 GlcNAc-PI de-N-acetylase 5 131 3.9E-22 T 25-04-2017 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 CLFO_RS21340 c9760c3c70555a4c52a24d7a638a91ac 114 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 10 113 4.2E-28 T 25-04-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLFO_RS21340 c9760c3c70555a4c52a24d7a638a91ac 114 PIRSF PIRSF004555 11 114 1.1E-39 T 25-04-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLFO_RS21340 c9760c3c70555a4c52a24d7a638a91ac 114 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 13 107 23.028 T 25-04-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLFO_RS21340 c9760c3c70555a4c52a24d7a638a91ac 114 Gene3D G3DSA:3.30.1310.10 8 114 2.3E-42 T 25-04-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLFO_RS21340 c9760c3c70555a4c52a24d7a638a91ac 114 Pfam PF02575 YbaB/EbfC DNA-binding family 20 109 9.1E-35 T 25-04-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLFO_RS21340 c9760c3c70555a4c52a24d7a638a91ac 114 SUPERFAMILY SSF82607 19 113 1.7E-33 T 25-04-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLFO_RS13740 b9cdc0df544fd94dfe6bec8c0a08b5f3 255 Pfam PF08241 Methyltransferase domain 107 156 3.4E-13 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS13740 b9cdc0df544fd94dfe6bec8c0a08b5f3 255 Gene3D G3DSA:3.40.50.150 108 251 9.3E-19 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS13740 b9cdc0df544fd94dfe6bec8c0a08b5f3 255 SUPERFAMILY SSF53335 108 215 1.03E-16 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11080 55c7556d51d42af7583db42153f466a5 252 Gene3D G3DSA:3.30.1330.60 110 239 8.8E-37 T 25-04-2017 IPR006665 OmpA-like domain CLFO_RS11080 55c7556d51d42af7583db42153f466a5 252 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 1.4E-21 T 25-04-2017 IPR025713 Motility protein B, N-terminal domain CLFO_RS11080 55c7556d51d42af7583db42153f466a5 252 Pfam PF00691 OmpA family 130 233 3.3E-22 T 25-04-2017 IPR006665 OmpA-like domain CLFO_RS11080 55c7556d51d42af7583db42153f466a5 252 SUPERFAMILY SSF103088 109 239 1.83E-32 T 25-04-2017 IPR006665 OmpA-like domain CLFO_RS03875 49c38356da9fdc6e5e716d95ad969e44 176 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 33 161 4.5E-27 T 25-04-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CLFO_RS12530 92621b380bbc62f3e1c9ed0713e0f71b 415 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 210 410 1.1E-51 T 25-04-2017 IPR010897 Sporulation stage II, protein P CLFO_RS12530 92621b380bbc62f3e1c9ed0713e0f71b 415 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 193 407 6.4E-72 T 25-04-2017 IPR010897 Sporulation stage II, protein P CLFO_RS04300 ac7f3689779f002727ea6c36fadc5aa6 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 57 9.3E-8 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS04300 ac7f3689779f002727ea6c36fadc5aa6 220 SUPERFAMILY SSF46689 3 73 1.54E-10 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS04300 ac7f3689779f002727ea6c36fadc5aa6 220 Gene3D G3DSA:1.10.357.10 5 214 7.9E-33 T 25-04-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLFO_RS20955 1bede74cb8d84f4157c775f5647db3e7 181 SMART SM00014 53 165 3.2E-18 T 25-04-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLFO_RS20955 1bede74cb8d84f4157c775f5647db3e7 181 SUPERFAMILY SSF48317 3 175 8.76E-36 T 25-04-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLFO_RS20955 1bede74cb8d84f4157c775f5647db3e7 181 Pfam PF01569 PAP2 superfamily 60 170 5.2E-24 T 25-04-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLFO_RS20955 1bede74cb8d84f4157c775f5647db3e7 181 Gene3D G3DSA:1.20.144.10 1 177 6.9E-40 T 25-04-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLFO_RS12880 a61f98c718ae6d7de504bb1aa5891d0b 189 Gene3D G3DSA:3.40.50.620 30 162 1.8E-28 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS12880 a61f98c718ae6d7de504bb1aa5891d0b 189 Pfam PF02698 DUF218 domain 36 179 1.5E-32 T 25-04-2017 IPR003848 Domain of unknown function DUF218 CLFO_RS15080 a578b462fadead99ac7ed1e012c332f9 287 SUPERFAMILY SSF161098 50 271 5.76E-51 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15080 a578b462fadead99ac7ed1e012c332f9 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 280 4.9E-15 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15080 a578b462fadead99ac7ed1e012c332f9 287 Gene3D G3DSA:1.10.3720.10 56 278 7.9E-52 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS14265 b7364f5034e7a13e17e0c1f0472f7965 229 SUPERFAMILY SSF116726 139 218 6.93E-12 T 25-04-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLFO_RS14265 b7364f5034e7a13e17e0c1f0472f7965 229 Gene3D G3DSA:3.30.70.1450 150 219 1.2E-11 T 25-04-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLFO_RS14265 b7364f5034e7a13e17e0c1f0472f7965 229 Pfam PF02080 TrkA-C domain 153 219 1.1E-8 T 25-04-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CLFO_RS07605 f3d0614917541a733737c3381c6fd619 436 SUPERFAMILY SSF56672 35 336 3.47E-49 T 25-04-2017 CLFO_RS07605 f3d0614917541a733737c3381c6fd619 436 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 100 314 7.8E-37 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS07605 f3d0614917541a733737c3381c6fd619 436 Pfam PF08388 Group II intron, maturase-specific domain 340 413 7.7E-9 T 25-04-2017 IPR013597 Group II intron, maturase-specific CLFO_RS07605 f3d0614917541a733737c3381c6fd619 436 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 43 406 3.1E-127 T 25-04-2017 IPR030931 Group II intron reverse transcriptase/maturase CLFO_RS14025 749bb9844fd065bc7c9c9504013c66ca 65 Gene3D G3DSA:1.10.10.10 10 60 5.8E-6 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS14025 749bb9844fd065bc7c9c9504013c66ca 65 SUPERFAMILY SSF88659 7 59 6.17E-8 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS07600 f26f67f8f70f58b1c6c7a7903f162d2d 337 SUPERFAMILY SSF56672 1 237 4.4E-43 T 25-04-2017 CLFO_RS07600 f26f67f8f70f58b1c6c7a7903f162d2d 337 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 1 215 2.0E-37 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS07600 f26f67f8f70f58b1c6c7a7903f162d2d 337 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 1 307 1.0E-107 T 25-04-2017 IPR030931 Group II intron reverse transcriptase/maturase CLFO_RS07600 f26f67f8f70f58b1c6c7a7903f162d2d 337 Pfam PF08388 Group II intron, maturase-specific domain 241 314 9.3E-9 T 25-04-2017 IPR013597 Group II intron, maturase-specific CLFO_RS20010 3e8afab03ea26b3f2647096b93c33de8 515 Gene3D G3DSA:3.90.226.10 3 259 4.8E-82 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS20010 3e8afab03ea26b3f2647096b93c33de8 515 Gene3D G3DSA:3.90.226.10 269 514 2.1E-104 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS20010 3e8afab03ea26b3f2647096b93c33de8 515 SUPERFAMILY SSF52096 5 255 8.19E-78 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS20010 3e8afab03ea26b3f2647096b93c33de8 515 Pfam PF01039 Carboxyl transferase domain 28 513 4.5E-200 T 25-04-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS20010 3e8afab03ea26b3f2647096b93c33de8 515 SUPERFAMILY SSF52096 224 514 1.01E-95 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS09060 467740a988bf0460a7f69822a88b7464 348 SUPERFAMILY SSF51735 3 168 9.34E-20 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS09060 467740a988bf0460a7f69822a88b7464 348 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 104 4.1E-9 T 25-04-2017 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS09060 467740a988bf0460a7f69822a88b7464 348 Gene3D G3DSA:3.40.50.720 1 152 8.0E-25 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS05790 88e40fa428a18ed88fe55878712343cb 416 Gene3D G3DSA:3.40.50.2300 163 347 3.8E-81 T 25-04-2017 CLFO_RS05790 88e40fa428a18ed88fe55878712343cb 416 Pfam PF13433 Periplasmic binding protein domain 48 407 5.5E-169 T 25-04-2017 CLFO_RS05790 88e40fa428a18ed88fe55878712343cb 416 SUPERFAMILY SSF53822 47 410 7.07E-111 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS05790 88e40fa428a18ed88fe55878712343cb 416 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 48 404 3.5E-185 T 25-04-2017 IPR017777 ABC transporter, urea, substrate-binding, UrtA CLFO_RS05790 88e40fa428a18ed88fe55878712343cb 416 Gene3D G3DSA:3.40.50.2300 47 162 1.9E-6 T 25-04-2017 CLFO_RS11095 28fa8d50ddbc9b11a7da238c3d3f7e77 495 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 415 493 5.2E-22 T 25-04-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLFO_RS11095 28fa8d50ddbc9b11a7da238c3d3f7e77 495 Pfam PF07559 Flagellar basal body protein FlaE 252 375 1.6E-7 T 25-04-2017 IPR011491 Flagellar hook protein FlgE CLFO_RS11095 28fa8d50ddbc9b11a7da238c3d3f7e77 495 SUPERFAMILY SSF117143 92 188 1.12E-61 T 25-04-2017 CLFO_RS11095 28fa8d50ddbc9b11a7da238c3d3f7e77 495 SUPERFAMILY SSF117143 245 455 1.12E-61 T 25-04-2017 CLFO_RS11095 28fa8d50ddbc9b11a7da238c3d3f7e77 495 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 476 1.9E-84 T 25-04-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLFO_RS11095 28fa8d50ddbc9b11a7da238c3d3f7e77 495 Pfam PF00460 Flagella basal body rod protein 8 35 3.7E-11 T 25-04-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLFO_RS08400 5f1f1369ad1f787f95f6f45c399f90cf 244 SMART SM00481 13 81 1.5E-9 T 25-04-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CLFO_RS08400 5f1f1369ad1f787f95f6f45c399f90cf 244 SUPERFAMILY SSF89550 9 91 1.11E-31 T 25-04-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLFO_RS08400 5f1f1369ad1f787f95f6f45c399f90cf 244 SUPERFAMILY SSF89550 136 242 1.11E-31 T 25-04-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CLFO_RS08400 5f1f1369ad1f787f95f6f45c399f90cf 244 Gene3D G3DSA:3.20.20.140 128 222 4.9E-25 T 25-04-2017 CLFO_RS08400 5f1f1369ad1f787f95f6f45c399f90cf 244 Gene3D G3DSA:3.20.20.140 11 96 4.9E-25 T 25-04-2017 CLFO_RS08400 5f1f1369ad1f787f95f6f45c399f90cf 244 Pfam PF02811 PHP domain 14 121 1.1E-8 T 25-04-2017 IPR004013 PHP domain GO:0003824 CLFO_RS14815 e17c5c2c06e8a6d483141a8ec332760f 215 SMART SM01018 4 89 9.3E-18 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS14815 e17c5c2c06e8a6d483141a8ec332760f 215 Gene3D G3DSA:3.40.50.280 81 214 1.5E-43 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS14815 e17c5c2c06e8a6d483141a8ec332760f 215 SUPERFAMILY SSF52242 77 214 1.44E-38 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS14815 e17c5c2c06e8a6d483141a8ec332760f 215 Pfam PF02607 B12 binding domain 10 82 8.6E-14 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS14815 e17c5c2c06e8a6d483141a8ec332760f 215 Gene3D G3DSA:1.10.1240.10 8 80 1.1E-11 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS14815 e17c5c2c06e8a6d483141a8ec332760f 215 SUPERFAMILY SSF47644 7 87 2.48E-16 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS14815 e17c5c2c06e8a6d483141a8ec332760f 215 Pfam PF02310 B12 binding domain 95 197 1.0E-19 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS17295 fd018571a363b9be4390294d7f3c6a17 59 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 14 51 3.5E-9 T 25-04-2017 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 CLFO_RS05725 feb845423b8a3eb4c5cb33135c923940 231 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 42 225 1.7E-21 T 25-04-2017 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 CLFO_RS05725 feb845423b8a3eb4c5cb33135c923940 231 Pfam PF01881 CRISPR associated protein Cas6 110 226 3.3E-8 T 25-04-2017 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 CLFO_RS08405 f4ff2904558feb548231a3d04a5febee 181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 66 84 7.4E-5 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS08405 f4ff2904558feb548231a3d04a5febee 181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 36 50 7.4E-5 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS08405 f4ff2904558feb548231a3d04a5febee 181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 90 103 7.4E-5 T 25-04-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CLFO_RS08405 f4ff2904558feb548231a3d04a5febee 181 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 8 103 2.8E-14 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS08405 f4ff2904558feb548231a3d04a5febee 181 SUPERFAMILY SSF55874 8 140 2.13E-21 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS08405 f4ff2904558feb548231a3d04a5febee 181 SMART SM00387 1 106 7.1E-4 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS08405 f4ff2904558feb548231a3d04a5febee 181 Gene3D G3DSA:3.30.565.10 10 108 4.6E-17 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS18280 4bcd54964fc99a917b4a92fe27d96b38 152 SUPERFAMILY SSF55729 1 134 6.75E-22 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS18280 4bcd54964fc99a917b4a92fe27d96b38 152 Pfam PF13673 Acetyltransferase (GNAT) domain 31 131 1.7E-12 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS18280 4bcd54964fc99a917b4a92fe27d96b38 152 Gene3D G3DSA:3.40.630.30 2 133 5.5E-18 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS05905 7a5b52345fbd8c951982c267610028d4 345 Pfam PF13478 XdhC Rossmann domain 192 335 7.6E-43 T 25-04-2017 IPR027051 XdhC Rossmann domain CLFO_RS05905 7a5b52345fbd8c951982c267610028d4 345 SUPERFAMILY SSF51735 191 280 1.18E-6 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS05905 7a5b52345fbd8c951982c267610028d4 345 Gene3D G3DSA:3.40.50.20 180 267 5.0E-6 T 25-04-2017 IPR016185 Pre-ATP-grasp domain CLFO_RS05905 7a5b52345fbd8c951982c267610028d4 345 Pfam PF02625 XdhC and CoxI family 13 76 8.8E-18 T 25-04-2017 IPR003777 XdhC- CoxI CLFO_RS13355 dd8aa51072927637e7aab4a98af7c7f4 442 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 102 326 2.0E-40 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS13355 dd8aa51072927637e7aab4a98af7c7f4 442 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 47 411 1.2E-112 T 25-04-2017 IPR030931 Group II intron reverse transcriptase/maturase CLFO_RS13355 dd8aa51072927637e7aab4a98af7c7f4 442 SUPERFAMILY SSF56672 34 384 2.0E-56 T 25-04-2017 CLFO_RS11320 0e57e04b1ee3fa345518c30b98991dfc 407 Pfam PF07670 Nucleoside recognition 37 131 2.8E-6 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS11320 0e57e04b1ee3fa345518c30b98991dfc 407 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 4 381 2.0E-103 T 25-04-2017 IPR014226 Sporulation integral membrane protein YlbJ CLFO_RS14260 8da991d25ca95b99db4992fafbf3ab7a 155 Pfam PF01668 SmpB protein 9 72 3.2E-31 T 25-04-2017 IPR000037 SsrA-binding protein GO:0003723 CLFO_RS14260 8da991d25ca95b99db4992fafbf3ab7a 155 SUPERFAMILY SSF74982 3 132 1.83E-52 T 25-04-2017 IPR023620 Small protein B CLFO_RS14260 8da991d25ca95b99db4992fafbf3ab7a 155 Gene3D G3DSA:2.40.280.10 7 127 1.0E-51 T 25-04-2017 IPR023620 Small protein B CLFO_RS14260 8da991d25ca95b99db4992fafbf3ab7a 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 149 4.3E-56 T 25-04-2017 IPR000037 SsrA-binding protein GO:0003723 CLFO_RS14260 8da991d25ca95b99db4992fafbf3ab7a 155 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 25-04-2017 IPR020081 SsrA-binding protein, conserved site CLFO_RS14260 8da991d25ca95b99db4992fafbf3ab7a 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 73.317 T 25-04-2017 IPR000037 SsrA-binding protein GO:0003723 CLFO_RS14260 8da991d25ca95b99db4992fafbf3ab7a 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 132 3.0E-49 T 25-04-2017 IPR000037 SsrA-binding protein GO:0003723 CLFO_RS13145 12a51f4d4bf7e93c56b6583084ecb7e8 194 SUPERFAMILY SSF141571 6 177 2.26E-39 T 25-04-2017 CLFO_RS13145 12a51f4d4bf7e93c56b6583084ecb7e8 194 Pfam PF13599 Pentapeptide repeats (9 copies) 96 157 6.8E-10 T 25-04-2017 IPR001646 Pentapeptide repeat CLFO_RS13145 12a51f4d4bf7e93c56b6583084ecb7e8 194 Pfam PF13599 Pentapeptide repeats (9 copies) 29 87 2.4E-11 T 25-04-2017 IPR001646 Pentapeptide repeat CLFO_RS18645 ae3ad0e37085f7ea35b3add5f43acab6 176 Pfam PF03773 Predicted permease 29 169 6.3E-14 T 25-04-2017 IPR005524 Predicted permease DUF318 CLFO_RS13615 a03190b6db939e9afc97159095cc7b36 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 168 218 8.3E-17 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS13615 a03190b6db939e9afc97159095cc7b36 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 207 1.0E-9 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS13615 a03190b6db939e9afc97159095cc7b36 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 179 1.0E-9 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS13615 a03190b6db939e9afc97159095cc7b36 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 195 1.0E-9 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS13615 a03190b6db939e9afc97159095cc7b36 226 SMART SM00421 162 219 3.0E-15 T 25-04-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CLFO_RS13615 a03190b6db939e9afc97159095cc7b36 226 Gene3D G3DSA:3.40.50.2300 15 136 8.9E-33 T 25-04-2017 CLFO_RS13615 a03190b6db939e9afc97159095cc7b36 226 SMART SM00448 20 133 1.9E-27 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13615 a03190b6db939e9afc97159095cc7b36 226 Pfam PF00072 Response regulator receiver domain 23 134 2.4E-27 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS13615 a03190b6db939e9afc97159095cc7b36 226 Gene3D G3DSA:1.10.10.10 137 225 1.4E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13615 a03190b6db939e9afc97159095cc7b36 226 SUPERFAMILY SSF52172 20 145 2.13E-31 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS13615 a03190b6db939e9afc97159095cc7b36 226 SUPERFAMILY SSF46894 164 224 5.1E-16 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS12930 35a6f465ce02f9b0d20b20cda339ed19 434 PIRSF PIRSF006066 6 434 1.9E-151 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS12930 35a6f465ce02f9b0d20b20cda339ed19 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 428 2.8E-129 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS12930 35a6f465ce02f9b0d20b20cda339ed19 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 14 421 1.5E-110 T 25-04-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLFO_RS19675 ca82a5efa8f8a25692eae463cf3b3aa9 227 Pfam PF00189 Ribosomal protein S3, C-terminal domain 121 203 3.9E-40 T 25-04-2017 CLFO_RS19675 ca82a5efa8f8a25692eae463cf3b3aa9 227 ProSitePatterns PS00548 Ribosomal protein S3 signature. 164 198 - T 25-04-2017 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19675 ca82a5efa8f8a25692eae463cf3b3aa9 227 Gene3D G3DSA:3.30.300.20 17 108 1.4E-33 T 25-04-2017 IPR015946 K homology domain-like, alpha/beta CLFO_RS19675 ca82a5efa8f8a25692eae463cf3b3aa9 227 Pfam PF07650 KH domain 38 111 2.8E-19 T 25-04-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19675 ca82a5efa8f8a25692eae463cf3b3aa9 227 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 4.8E-96 T 25-04-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CLFO_RS19675 ca82a5efa8f8a25692eae463cf3b3aa9 227 SUPERFAMILY SSF54821 108 207 4.45E-40 T 25-04-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19675 ca82a5efa8f8a25692eae463cf3b3aa9 227 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 207 39.156 T 25-04-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CLFO_RS19675 ca82a5efa8f8a25692eae463cf3b3aa9 227 Gene3D G3DSA:3.30.1140.32 110 208 2.2E-45 T 25-04-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19675 ca82a5efa8f8a25692eae463cf3b3aa9 227 SMART SM00322 61 126 1.4E-9 T 25-04-2017 IPR004087 K Homology domain GO:0003676 CLFO_RS19675 ca82a5efa8f8a25692eae463cf3b3aa9 227 SUPERFAMILY SSF54814 2 107 8.37E-38 T 25-04-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 CLFO_RS07195 e044982b4107052c03d5cea1b7fb0d29 491 SUPERFAMILY SSF46785 13 82 9.07E-17 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS07195 e044982b4107052c03d5cea1b7fb0d29 491 Gene3D G3DSA:1.10.10.10 15 82 8.3E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS07195 e044982b4107052c03d5cea1b7fb0d29 491 SMART SM00345 22 81 1.6E-11 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS07195 e044982b4107052c03d5cea1b7fb0d29 491 Gene3D G3DSA:3.90.1150.10 355 471 1.4E-6 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS07195 e044982b4107052c03d5cea1b7fb0d29 491 Pfam PF00155 Aminotransferase class I and II 110 465 8.7E-30 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS07195 e044982b4107052c03d5cea1b7fb0d29 491 SUPERFAMILY SSF53383 108 470 2.04E-92 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS07195 e044982b4107052c03d5cea1b7fb0d29 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 81 1.2E-12 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS07195 e044982b4107052c03d5cea1b7fb0d29 491 Gene3D G3DSA:3.40.640.10 138 354 5.9E-69 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS17290 139cae90b11497b3b163d1eca698f4bb 86 SMART SM00530 15 75 9.9E-5 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS17290 139cae90b11497b3b163d1eca698f4bb 86 SUPERFAMILY SSF47413 7 79 4.79E-12 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS17290 139cae90b11497b3b163d1eca698f4bb 86 Pfam PF12844 Helix-turn-helix domain 13 78 3.1E-9 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS17290 139cae90b11497b3b163d1eca698f4bb 86 Gene3D G3DSA:1.10.260.40 9 80 2.7E-13 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS03455 f32ec411ac472cb6070d083995102e2c 203 SUPERFAMILY SSF53041 4 152 4.45E-32 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS03455 f32ec411ac472cb6070d083995102e2c 203 SMART SM00857 5 152 7.6E-31 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS03455 f32ec411ac472cb6070d083995102e2c 203 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 25-04-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CLFO_RS03455 f32ec411ac472cb6070d083995102e2c 203 Pfam PF00239 Resolvase, N terminal domain 5 151 1.6E-26 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS03455 f32ec411ac472cb6070d083995102e2c 203 Gene3D G3DSA:3.40.50.1390 4 126 2.1E-29 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS03455 f32ec411ac472cb6070d083995102e2c 203 Gene3D G3DSA:1.20.5.40 127 151 3.0E-10 T 25-04-2017 CLFO_RS07395 156aadce78766b1b368022884a1d2e2d 100 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 5 68 2.6E-11 T 25-04-2017 IPR006450 Phage protein of unkonwn function CLFO_RS07395 156aadce78766b1b368022884a1d2e2d 100 Pfam PF05135 Phage gp6-like head-tail connector protein 3 90 7.0E-14 T 25-04-2017 IPR021146 Phage gp6-like head-tail connector protein CLFO_RS04755 6ede10ec0b66e2e430fa5c1d5c714bf0 315 PIRSF PIRSF000446 1 292 1.6E-101 T 25-04-2017 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CLFO_RS04755 6ede10ec0b66e2e430fa5c1d5c714bf0 315 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 279 8.7E-113 T 25-04-2017 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CLFO_RS04755 6ede10ec0b66e2e430fa5c1d5c714bf0 315 Pfam PF00698 Acyl transferase domain 4 252 1.8E-35 T 25-04-2017 IPR014043 Acyl transferase CLFO_RS04755 6ede10ec0b66e2e430fa5c1d5c714bf0 315 Gene3D G3DSA:3.40.366.10 2 117 1.5E-61 T 25-04-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CLFO_RS04755 6ede10ec0b66e2e430fa5c1d5c714bf0 315 Gene3D G3DSA:3.40.366.10 188 289 1.5E-61 T 25-04-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CLFO_RS04755 6ede10ec0b66e2e430fa5c1d5c714bf0 315 SUPERFAMILY SSF55048 121 188 1.18E-14 T 25-04-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CLFO_RS04755 6ede10ec0b66e2e430fa5c1d5c714bf0 315 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 288 7.9E-30 T 25-04-2017 IPR020801 Polyketide synthase, acyl transferase domain CLFO_RS04755 6ede10ec0b66e2e430fa5c1d5c714bf0 315 Gene3D G3DSA:3.30.70.250 119 187 9.4E-23 T 25-04-2017 CLFO_RS04755 6ede10ec0b66e2e430fa5c1d5c714bf0 315 SUPERFAMILY SSF52151 1 117 2.14E-60 T 25-04-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CLFO_RS04755 6ede10ec0b66e2e430fa5c1d5c714bf0 315 SUPERFAMILY SSF52151 181 288 2.14E-60 T 25-04-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CLFO_RS19575 b18152289d8a1e6b0d8203c030011f8d 123 SUPERFAMILY SSF46946 2 121 1.31E-47 T 25-04-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CLFO_RS19575 b18152289d8a1e6b0d8203c030011f8d 123 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 29.567 T 25-04-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19575 b18152289d8a1e6b0d8203c030011f8d 123 PIRSF PIRSF002134 1 123 2.7E-46 T 25-04-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19575 b18152289d8a1e6b0d8203c030011f8d 123 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.4E-53 T 25-04-2017 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS19575 b18152289d8a1e6b0d8203c030011f8d 123 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 25-04-2017 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19575 b18152289d8a1e6b0d8203c030011f8d 123 Gene3D G3DSA:1.10.8.50 1 72 1.2E-32 T 25-04-2017 CLFO_RS19575 b18152289d8a1e6b0d8203c030011f8d 123 Pfam PF00416 Ribosomal protein S13/S18 3 109 5.9E-35 T 25-04-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19575 b18152289d8a1e6b0d8203c030011f8d 123 Gene3D G3DSA:4.10.910.10 73 122 2.1E-26 T 25-04-2017 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS05540 cd12e5e01970acc41d3faf8045ff21e4 816 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 25-04-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLFO_RS05540 cd12e5e01970acc41d3faf8045ff21e4 816 Gene3D G3DSA:3.20.20.70 13 143 1.8E-4 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS05540 cd12e5e01970acc41d3faf8045ff21e4 816 Pfam PF01136 Peptidase family U32 77 301 1.1E-86 T 25-04-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLFO_RS05540 cd12e5e01970acc41d3faf8045ff21e4 816 Pfam PF01136 Peptidase family U32 603 798 5.9E-26 T 25-04-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CLFO_RS05540 cd12e5e01970acc41d3faf8045ff21e4 816 Pfam PF12392 Collagenase 390 508 6.0E-21 T 25-04-2017 IPR020988 Peptidase U32, collagenase CLFO_RS19805 5b4f01c0eb531e109655a4aa6fe252aa 284 SUPERFAMILY SSF69796 189 264 1.57E-57 T 25-04-2017 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CLFO_RS19805 5b4f01c0eb531e109655a4aa6fe252aa 284 SUPERFAMILY SSF69796 5 136 1.57E-57 T 25-04-2017 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CLFO_RS19805 5b4f01c0eb531e109655a4aa6fe252aa 284 Pfam PF02511 Thymidylate synthase complementing protein 8 250 9.6E-64 T 25-04-2017 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CLFO_RS19805 5b4f01c0eb531e109655a4aa6fe252aa 284 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 5 263 28.195 T 25-04-2017 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CLFO_RS19805 5b4f01c0eb531e109655a4aa6fe252aa 284 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 7 254 5.1E-50 T 25-04-2017 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CLFO_RS01185 2ae03eb39e10b105edde9d53efc34e04 163 Pfam PF06695 Putative small multi-drug export protein 28 148 2.7E-40 T 25-04-2017 IPR009577 Putative small multi-drug export CLFO_RS08520 2e7546fa96a6f77f0c81c2fb8a621d20 498 Pfam PF10150 Ribonuclease E/G family 121 390 4.5E-102 T 25-04-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CLFO_RS08520 2e7546fa96a6f77f0c81c2fb8a621d20 498 SMART SM00316 36 119 8.2E-7 T 25-04-2017 IPR022967 RNA-binding domain, S1 CLFO_RS08520 2e7546fa96a6f77f0c81c2fb8a621d20 498 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 12 422 1.5E-153 T 25-04-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CLFO_RS08520 2e7546fa96a6f77f0c81c2fb8a621d20 498 Gene3D G3DSA:2.40.50.140 29 125 1.9E-37 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS08520 2e7546fa96a6f77f0c81c2fb8a621d20 498 SUPERFAMILY SSF50249 38 125 6.48E-19 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS12015 47fbbd407281fc626cb0c7e9930c6c7c 242 Pfam PF01881 CRISPR associated protein Cas6 98 241 1.4E-26 T 25-04-2017 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 CLFO_RS12015 47fbbd407281fc626cb0c7e9930c6c7c 242 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 43 240 9.5E-24 T 25-04-2017 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 CLFO_RS15680 06c3dfc3b0af68d0d881c9d6e26f1bd9 236 Pfam PF00005 ABC transporter 27 169 1.9E-34 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS15680 06c3dfc3b0af68d0d881c9d6e26f1bd9 236 Gene3D G3DSA:3.40.50.300 5 222 1.2E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15680 06c3dfc3b0af68d0d881c9d6e26f1bd9 236 SUPERFAMILY SSF52540 6 225 3.75E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15680 06c3dfc3b0af68d0d881c9d6e26f1bd9 236 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS15680 06c3dfc3b0af68d0d881c9d6e26f1bd9 236 SMART SM00382 35 218 2.4E-14 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS05900 3914392a835eff9676f1c348ffd70df8 443 Gene3D G3DSA:3.40.50.980 98 246 1.4E-11 T 25-04-2017 CLFO_RS05900 3914392a835eff9676f1c348ffd70df8 443 Pfam PF00501 AMP-binding enzyme 81 289 1.2E-10 T 25-04-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CLFO_RS05900 3914392a835eff9676f1c348ffd70df8 443 SUPERFAMILY SSF56801 33 399 7.06E-36 T 25-04-2017 CLFO_RS02895 a7a448956f5142dfa922a31b5647cc24 422 Gene3D G3DSA:3.30.70.1380 276 363 1.2E-29 T 25-04-2017 CLFO_RS02895 a7a448956f5142dfa922a31b5647cc24 422 Hamap MF_01074 UPF0272 protein . 1 422 41.43 T 25-04-2017 IPR002822 Uncharacterised protein family UPF0272 CLFO_RS02895 a7a448956f5142dfa922a31b5647cc24 422 Gene3D G3DSA:3.10.20.300 365 420 2.7E-18 T 25-04-2017 CLFO_RS02895 a7a448956f5142dfa922a31b5647cc24 422 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 3 413 2.6E-110 T 25-04-2017 IPR002822 Uncharacterised protein family UPF0272 CLFO_RS02895 a7a448956f5142dfa922a31b5647cc24 422 Pfam PF01969 Protein of unknown function DUF111 4 413 5.8E-152 T 25-04-2017 IPR002822 Uncharacterised protein family UPF0272 CLFO_RS03965 43e7959890a15e308a82d4ab0e95854d 510 Gene3D G3DSA:3.40.720.10 451 509 4.8E-121 T 25-04-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLFO_RS03965 43e7959890a15e308a82d4ab0e95854d 510 Gene3D G3DSA:3.40.720.10 34 388 4.8E-121 T 25-04-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLFO_RS03965 43e7959890a15e308a82d4ab0e95854d 510 PRINTS PR00113 Alkaline phosphatase signature 186 196 3.6E-23 T 25-04-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CLFO_RS03965 43e7959890a15e308a82d4ab0e95854d 510 PRINTS PR00113 Alkaline phosphatase signature 104 119 3.6E-23 T 25-04-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CLFO_RS03965 43e7959890a15e308a82d4ab0e95854d 510 PRINTS PR00113 Alkaline phosphatase signature 142 162 3.6E-23 T 25-04-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CLFO_RS03965 43e7959890a15e308a82d4ab0e95854d 510 PRINTS PR00113 Alkaline phosphatase signature 47 67 3.6E-23 T 25-04-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CLFO_RS03965 43e7959890a15e308a82d4ab0e95854d 510 PRINTS PR00113 Alkaline phosphatase signature 263 292 3.6E-23 T 25-04-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CLFO_RS03965 43e7959890a15e308a82d4ab0e95854d 510 SMART SM00098 48 510 3.4E-39 T 25-04-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CLFO_RS03965 43e7959890a15e308a82d4ab0e95854d 510 ProSitePatterns PS00123 Alkaline phosphatase active site. 104 112 - T 25-04-2017 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CLFO_RS03965 43e7959890a15e308a82d4ab0e95854d 510 Pfam PF00245 Alkaline phosphatase 48 507 1.1E-66 T 25-04-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CLFO_RS03965 43e7959890a15e308a82d4ab0e95854d 510 SUPERFAMILY SSF53649 451 509 2.91E-106 T 25-04-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLFO_RS03965 43e7959890a15e308a82d4ab0e95854d 510 SUPERFAMILY SSF53649 39 388 2.91E-106 T 25-04-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLFO_RS20985 1043ef9bf77cf7adebba034f6be1fa04 478 Pfam PF07435 YycH protein 11 377 2.2E-12 T 25-04-2017 IPR009996 Regulatory protein YycH CLFO_RS06850 9674e186c9e1d5ccec78228683c15929 592 SUPERFAMILY SSF82171 258 353 6.28E-15 T 25-04-2017 CLFO_RS06850 9674e186c9e1d5ccec78228683c15929 592 SUPERFAMILY SSF82171 71 197 6.28E-15 T 25-04-2017 CLFO_RS06850 9674e186c9e1d5ccec78228683c15929 592 Gene3D G3DSA:2.120.10.30 224 239 2.5E-12 T 25-04-2017 IPR011042 Six-bladed beta-propeller, TolB-like CLFO_RS06850 9674e186c9e1d5ccec78228683c15929 592 Gene3D G3DSA:2.120.10.30 288 352 2.5E-12 T 25-04-2017 IPR011042 Six-bladed beta-propeller, TolB-like CLFO_RS06850 9674e186c9e1d5ccec78228683c15929 592 Gene3D G3DSA:2.120.10.30 71 192 2.5E-12 T 25-04-2017 IPR011042 Six-bladed beta-propeller, TolB-like CLFO_RS03880 3e464646b9010f29fb50a780f828d9a7 423 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 414 6.0E-129 T 25-04-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLFO_RS03880 3e464646b9010f29fb50a780f828d9a7 423 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 419 1.9E-146 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS03880 3e464646b9010f29fb50a780f828d9a7 423 PIRSF PIRSF006066 1 423 3.2E-163 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 SMART SM00436 140 230 3.4E-11 T 25-04-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 Pfam PF01131 DNA topoisomerase 166 582 1.3E-80 T 25-04-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 Gene3D G3DSA:1.10.460.10 169 224 9.9E-28 T 25-04-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 Gene3D G3DSA:1.10.460.10 461 599 9.9E-28 T 25-04-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 SMART SM00493 2 140 2.4E-9 T 25-04-2017 IPR006171 Toprim domain CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 Pfam PF01751 Toprim domain 5 144 7.3E-8 T 25-04-2017 IPR006171 Toprim domain CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 SMART SM00437 276 551 7.3E-26 T 25-04-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 Pfam PF13342 C-terminal repeat of topoisomerase 641 699 1.9E-19 T 25-04-2017 IPR025589 Topoisomerase C-terminal repeat CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 200 218 9.7E-13 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 393 409 9.7E-13 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 114 127 9.7E-13 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 318 327 9.7E-13 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 514 528 9.7E-13 T 25-04-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 Gene3D G3DSA:1.10.290.10 285 406 3.3E-23 T 25-04-2017 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 Gene3D G3DSA:3.40.50.140 3 162 1.3E-26 T 25-04-2017 IPR006171 Toprim domain CLFO_RS17335 17a15b4a7c997c6a1d4d046cb0097f4e 705 SUPERFAMILY SSF56712 1 627 6.93E-112 T 25-04-2017 IPR023405 DNA topoisomerase, type IA, core domain CLFO_RS01225 7ad2b11680980a0944564d6149638994 70 Pfam PF14375 Cysteine-rich CWC 10 56 3.5E-13 T 25-04-2017 IPR032720 Cysteine-rich CWC CLFO_RS02870 d957c806a97e9412bf31c9b8059227cd 1046 Gene3D G3DSA:3.40.50.300 1 162 1.3E-23 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02870 d957c806a97e9412bf31c9b8059227cd 1046 Pfam PF13476 AAA domain 5 309 1.1E-10 T 25-04-2017 CLFO_RS02870 d957c806a97e9412bf31c9b8059227cd 1046 Pfam PF13558 Putative exonuclease SbcCD, C subunit 934 1004 1.1E-11 T 25-04-2017 CLFO_RS02870 d957c806a97e9412bf31c9b8059227cd 1046 SUPERFAMILY SSF52540 939 1030 1.14E-26 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02870 d957c806a97e9412bf31c9b8059227cd 1046 SUPERFAMILY SSF52540 26 226 1.14E-26 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02870 d957c806a97e9412bf31c9b8059227cd 1046 Gene3D G3DSA:3.40.50.300 927 1031 1.8E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12180 3fcff877a2fa275237f50ac74198f2ab 244 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS12180 3fcff877a2fa275237f50ac74198f2ab 244 SMART SM00382 26 216 4.4E-15 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12180 3fcff877a2fa275237f50ac74198f2ab 244 SUPERFAMILY SSF52540 1 237 4.83E-76 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12180 3fcff877a2fa275237f50ac74198f2ab 244 PIRSF PIRSF039085 1 244 2.0E-105 T 25-04-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CLFO_RS12180 3fcff877a2fa275237f50ac74198f2ab 244 Gene3D G3DSA:3.40.50.300 1 239 2.3E-79 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12180 3fcff877a2fa275237f50ac74198f2ab 244 Pfam PF00005 ABC transporter 17 168 6.9E-35 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS17115 8d180d48b15ae7aad000d120f7346d52 1029 SMART SM00487 258 471 2.2E-7 T 25-04-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLFO_RS17115 8d180d48b15ae7aad000d120f7346d52 1029 SUPERFAMILY SSF52540 220 362 2.48E-23 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17115 8d180d48b15ae7aad000d120f7346d52 1029 SUPERFAMILY SSF52540 390 441 2.48E-23 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17115 8d180d48b15ae7aad000d120f7346d52 1029 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 11 704 1.1E-159 T 25-04-2017 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 CLFO_RS17115 8d180d48b15ae7aad000d120f7346d52 1029 Pfam PF04851 Type III restriction enzyme, res subunit 264 434 3.1E-15 T 25-04-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CLFO_RS17115 8d180d48b15ae7aad000d120f7346d52 1029 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 199 5.3E-32 T 25-04-2017 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CLFO_RS17115 8d180d48b15ae7aad000d120f7346d52 1029 Gene3D G3DSA:3.40.50.300 259 451 7.4E-21 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17115 8d180d48b15ae7aad000d120f7346d52 1029 SUPERFAMILY SSF52540 283 336 8.82E-6 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17115 8d180d48b15ae7aad000d120f7346d52 1029 SUPERFAMILY SSF52540 590 688 8.82E-6 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18565 0b43f84488e9711c03c2a80149ffeb0d 199 Pfam PF00881 Nitroreductase family 10 178 6.3E-14 T 25-04-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLFO_RS18565 0b43f84488e9711c03c2a80149ffeb0d 199 SUPERFAMILY SSF55469 4 198 4.32E-70 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS18565 0b43f84488e9711c03c2a80149ffeb0d 199 Gene3D G3DSA:3.40.109.10 4 199 1.5E-69 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS12235 817945a113f0b4b2aca0a7483f453420 372 SUPERFAMILY SSF102705 4 371 6.41E-129 T 25-04-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLFO_RS12235 817945a113f0b4b2aca0a7483f453420 372 Gene3D G3DSA:3.40.1390.30 4 115 5.2E-50 T 25-04-2017 CLFO_RS12235 817945a113f0b4b2aca0a7483f453420 372 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 368 1.0E-71 T 25-04-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLFO_RS12235 817945a113f0b4b2aca0a7483f453420 372 Gene3D G3DSA:3.30.70.830 132 237 1.2E-43 T 25-04-2017 CLFO_RS12235 817945a113f0b4b2aca0a7483f453420 372 PIRSF PIRSF037489 1 372 2.8E-145 T 25-04-2017 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria CLFO_RS12235 817945a113f0b4b2aca0a7483f453420 372 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 351 5.9E-87 T 25-04-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLFO_RS12235 817945a113f0b4b2aca0a7483f453420 372 Gene3D G3DSA:3.40.1390.30 239 330 9.4E-35 T 25-04-2017 CLFO_RS12235 817945a113f0b4b2aca0a7483f453420 372 Gene3D G3DSA:3.40.1390.30 116 131 9.4E-35 T 25-04-2017 CLFO_RS15650 50b5c5d4e347c64dc6fb2f369cb64459 371 SMART SM00897 23 206 1.3E-6 T 25-04-2017 IPR013702 FIST domain, N-terminal CLFO_RS15650 50b5c5d4e347c64dc6fb2f369cb64459 371 Pfam PF10442 FIST C domain 207 350 4.1E-13 T 25-04-2017 IPR019494 FIST, C-domain CLFO_RS15650 50b5c5d4e347c64dc6fb2f369cb64459 371 SMART SM01204 207 352 3.8E-11 T 25-04-2017 IPR019494 FIST, C-domain CLFO_RS15650 50b5c5d4e347c64dc6fb2f369cb64459 371 Pfam PF08495 FIST N domain 38 204 3.4E-18 T 25-04-2017 IPR013702 FIST domain, N-terminal CLFO_RS17795 02c460e66995b4bbeb53de0f4d38f995 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 305 6.1E-53 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS06270 0e1ea5f59aae4117660c9e1206dcc57c 351 Gene3D G3DSA:3.90.1150.10 251 340 6.2E-35 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS06270 0e1ea5f59aae4117660c9e1206dcc57c 351 Pfam PF01212 Beta-eliminating lyase 16 284 9.7E-31 T 25-04-2017 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CLFO_RS06270 0e1ea5f59aae4117660c9e1206dcc57c 351 Gene3D G3DSA:3.40.640.10 1 248 5.3E-61 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS06270 0e1ea5f59aae4117660c9e1206dcc57c 351 SUPERFAMILY SSF53383 1 339 8.7E-77 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS16360 896f7a1c8ceb7f37c9cf48f959808c26 153 Pfam PF00578 AhpC/TSA family 6 131 2.1E-32 T 25-04-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CLFO_RS16360 896f7a1c8ceb7f37c9cf48f959808c26 153 PIRSF PIRSF000239 1 153 9.8E-24 T 25-04-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CLFO_RS16360 896f7a1c8ceb7f37c9cf48f959808c26 153 SUPERFAMILY SSF52833 2 151 2.36E-38 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS16360 896f7a1c8ceb7f37c9cf48f959808c26 153 Gene3D G3DSA:3.40.30.10 2 152 1.4E-39 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS08505 e1734b23c85bf258e22208258a920ab9 293 Gene3D G3DSA:3.10.580.10 223 280 1.2E-5 T 25-04-2017 CLFO_RS08505 e1734b23c85bf258e22208258a920ab9 293 Pfam PF02163 Peptidase family M50 113 158 1.0E-7 T 25-04-2017 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 CLFO_RS08505 e1734b23c85bf258e22208258a920ab9 293 SUPERFAMILY SSF54631 199 277 2.62E-8 T 25-04-2017 CLFO_RS07390 183161957791cd80473db7252a418aa3 390 Pfam PF05065 Phage capsid family 118 385 3.1E-36 T 25-04-2017 IPR024455 Phage capsid CLFO_RS07390 183161957791cd80473db7252a418aa3 390 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 385 1.3E-78 T 25-04-2017 IPR006444 Phage major capsid protein, HK97 CLFO_RS07390 183161957791cd80473db7252a418aa3 390 SUPERFAMILY SSF56563 114 387 9.55E-47 T 25-04-2017 CLFO_RS08525 52466bb3d45a22757d4310190490383d 103 SUPERFAMILY SSF141091 1 102 1.7E-40 T 25-04-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS08525 52466bb3d45a22757d4310190490383d 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 25-04-2017 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS08525 52466bb3d45a22757d4310190490383d 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 28.012 T 25-04-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS08525 52466bb3d45a22757d4310190490383d 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 7.2E-45 T 25-04-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS08525 52466bb3d45a22757d4310190490383d 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 1.7E-41 T 25-04-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS05355 906369b97b4c15264ae36f4fd479dd92 158 Pfam PF06177 QueT transporter 7 152 5.7E-48 T 25-04-2017 IPR010387 Queuosine precursor transporter QueT GO:0005886 CLFO_RS05355 906369b97b4c15264ae36f4fd479dd92 158 PIRSF PIRSF031501 1 157 2.1E-39 T 25-04-2017 IPR010387 Queuosine precursor transporter QueT GO:0005886 CLFO_RS11795 96c01f8bf6317bfabc4baf859f9ac0fe 192 PIRSF PIRSF010130 1 192 1.2E-83 T 25-04-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CLFO_RS11795 96c01f8bf6317bfabc4baf859f9ac0fe 192 Pfam PF06130 Phosphate propanoyltransferase 7 86 4.8E-27 T 25-04-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CLFO_RS11795 96c01f8bf6317bfabc4baf859f9ac0fe 192 Pfam PF06130 Phosphate propanoyltransferase 115 181 2.6E-17 T 25-04-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CLFO_RS10050 d289a0dbe291e2de681b032f887f8a57 275 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 146 159 - T 25-04-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CLFO_RS10050 d289a0dbe291e2de681b032f887f8a57 275 Pfam PF11104 Type IV pilus assembly protein PilM; 145 257 3.2E-10 T 25-04-2017 IPR005883 Type IV pilus assembly protein PilM CLFO_RS10050 d289a0dbe291e2de681b032f887f8a57 275 SUPERFAMILY SSF53067 34 271 4.79E-27 T 25-04-2017 CLFO_RS10050 d289a0dbe291e2de681b032f887f8a57 275 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 35 273 6.6E-103 T 25-04-2017 IPR013366 Ethanolamine utilisation EutJ CLFO_RS10050 d289a0dbe291e2de681b032f887f8a57 275 Gene3D G3DSA:3.30.420.40 30 152 3.5E-25 T 25-04-2017 CLFO_RS10050 d289a0dbe291e2de681b032f887f8a57 275 Gene3D G3DSA:3.30.420.40 153 256 8.0E-38 T 25-04-2017 CLFO_RS08230 6295654e3b053d2f96ff00f02ea8d75c 399 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 210 288 2.2E-12 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS06680 c1a260e0c62d1551b089a7e814112497 313 SUPERFAMILY SSF69318 104 254 2.75E-7 T 25-04-2017 CLFO_RS06680 c1a260e0c62d1551b089a7e814112497 313 Gene3D G3DSA:2.130.10.130 109 251 2.3E-5 T 25-04-2017 CLFO_RS16300 7f1272639145278cd6106cc2bacc66db 284 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 155 281 4.2E-22 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS16300 7f1272639145278cd6106cc2bacc66db 284 Gene3D G3DSA:1.10.287.950 121 281 2.4E-29 T 25-04-2017 CLFO_RS16300 7f1272639145278cd6106cc2bacc66db 284 Pfam PF05651 Putative sugar diacid recognition 4 126 2.5E-28 T 25-04-2017 IPR008599 Putative sugar diacid recognition CLFO_RS16300 7f1272639145278cd6106cc2bacc66db 284 SUPERFAMILY SSF58104 121 280 3.79E-28 T 25-04-2017 CLFO_RS14010 29bc42bf839d4f352805e4d3b076e31d 386 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 167 358 1.6E-7 T 25-04-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CLFO_RS14010 29bc42bf839d4f352805e4d3b076e31d 386 Gene3D G3DSA:3.20.20.210 4 116 1.4E-19 T 25-04-2017 CLFO_RS14010 29bc42bf839d4f352805e4d3b076e31d 386 Gene3D G3DSA:3.20.20.210 149 384 1.4E-19 T 25-04-2017 CLFO_RS14010 29bc42bf839d4f352805e4d3b076e31d 386 SUPERFAMILY SSF51726 126 383 3.4E-32 T 25-04-2017 CLFO_RS14010 29bc42bf839d4f352805e4d3b076e31d 386 SUPERFAMILY SSF51726 11 75 3.4E-32 T 25-04-2017 CLFO_RS06100 b4d8a3f8920f9f6dbbce7ba0942c2703 204 Pfam PF08241 Methyltransferase domain 47 140 4.0E-25 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS06100 b4d8a3f8920f9f6dbbce7ba0942c2703 204 SUPERFAMILY SSF53335 8 195 1.84E-40 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS06100 b4d8a3f8920f9f6dbbce7ba0942c2703 204 Gene3D G3DSA:3.40.50.150 7 198 1.0E-39 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS15220 b44ca25d789deb01168f2248c4c2c31a 215 Pfam PF04199 Putative cyclase 4 155 1.1E-30 T 25-04-2017 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734 CLFO_RS15220 b44ca25d789deb01168f2248c4c2c31a 215 SUPERFAMILY SSF102198 1 213 2.49E-61 T 25-04-2017 CLFO_RS15220 b44ca25d789deb01168f2248c4c2c31a 215 Gene3D G3DSA:3.50.30.50 1 214 3.0E-64 T 25-04-2017 CLFO_RS12450 93cef1cd166a68cfc71534e98c4ebd36 333 Pfam PF12127 SigmaW regulon antibacterial 8 318 3.4E-165 T 25-04-2017 IPR022853 Uncharacterised protein family YdfA-immunity CLFO_RS12450 93cef1cd166a68cfc71534e98c4ebd36 333 Hamap MF_01562 UPF0365 protein . 2 322 47.639 T 25-04-2017 IPR022853 Uncharacterised protein family YdfA-immunity CLFO_RS18695 2def3fb76df095c7d1baf2533621e6c6 287 SUPERFAMILY SSF56300 53 283 2.62E-34 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS18695 2def3fb76df095c7d1baf2533621e6c6 287 Pfam PF00149 Calcineurin-like phosphoesterase 53 222 2.4E-16 T 25-04-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CLFO_RS18695 2def3fb76df095c7d1baf2533621e6c6 287 Gene3D G3DSA:3.60.21.10 53 236 3.9E-23 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS20740 f5afb93cfcea81a6fe2f353f7acd38f7 294 Pfam PF00892 EamA-like transporter family 148 277 1.7E-8 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS20740 f5afb93cfcea81a6fe2f353f7acd38f7 294 Pfam PF00892 EamA-like transporter family 1 137 3.0E-15 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS20740 f5afb93cfcea81a6fe2f353f7acd38f7 294 SUPERFAMILY SSF103481 201 279 3.79E-11 T 25-04-2017 CLFO_RS20740 f5afb93cfcea81a6fe2f353f7acd38f7 294 TIGRFAM TIGR00688 rarD: protein RarD 2 254 5.7E-71 T 25-04-2017 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 CLFO_RS20740 f5afb93cfcea81a6fe2f353f7acd38f7 294 SUPERFAMILY SSF103481 36 138 7.98E-10 T 25-04-2017 CLFO_RS10200 d62d52c302c26d9d3507fccbc27fdf6a 202 SUPERFAMILY SSF56349 8 197 4.41E-34 T 25-04-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLFO_RS10200 d62d52c302c26d9d3507fccbc27fdf6a 202 Pfam PF00589 Phage integrase family 11 185 1.5E-19 T 25-04-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS10200 d62d52c302c26d9d3507fccbc27fdf6a 202 Gene3D G3DSA:1.10.443.10 16 196 5.7E-31 T 25-04-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS16690 4f9a541a1241103e51f7258b8f647c1e 212 SUPERFAMILY SSF101473 11 205 2.75E-53 T 25-04-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLFO_RS16690 4f9a541a1241103e51f7258b8f647c1e 212 Pfam PF02734 DAK2 domain 32 204 1.2E-54 T 25-04-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLFO_RS16690 4f9a541a1241103e51f7258b8f647c1e 212 SMART SM01120 32 205 1.5E-72 T 25-04-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLFO_RS16690 4f9a541a1241103e51f7258b8f647c1e 212 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 12 204 5.1E-58 T 25-04-2017 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 CLFO_RS02050 e5912e4473d71e46960e6c94ccc2f378 571 SMART SM00283 292 567 2.4E-53 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS02050 e5912e4473d71e46960e6c94ccc2f378 571 SUPERFAMILY SSF58104 298 566 1.26E-62 T 25-04-2017 CLFO_RS02050 e5912e4473d71e46960e6c94ccc2f378 571 SUPERFAMILY SSF58104 231 265 1.26E-62 T 25-04-2017 CLFO_RS02050 e5912e4473d71e46960e6c94ccc2f378 571 Pfam PF12729 Four helix bundle sensory module for signal transduction 15 184 3.5E-11 T 25-04-2017 IPR024478 4HB MCP domain CLFO_RS02050 e5912e4473d71e46960e6c94ccc2f378 571 Gene3D G3DSA:1.10.287.950 307 525 8.1E-50 T 25-04-2017 CLFO_RS02050 e5912e4473d71e46960e6c94ccc2f378 571 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 547 1.2E-40 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS14640 6d174f35c2f1271a87191667a3b63396 235 Pfam PF00117 Glutamine amidotransferase class-I 20 198 5.7E-23 T 25-04-2017 IPR017926 Glutamine amidotransferase CLFO_RS14640 6d174f35c2f1271a87191667a3b63396 235 Gene3D G3DSA:3.40.50.880 26 217 4.6E-37 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS14640 6d174f35c2f1271a87191667a3b63396 235 SUPERFAMILY SSF52317 33 232 1.44E-35 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS20025 55df64a1e361c28b5c590c5990de35af 300 SUPERFAMILY SSF56112 18 227 3.91E-31 T 25-04-2017 IPR011009 Protein kinase-like domain CLFO_RS20025 55df64a1e361c28b5c590c5990de35af 300 Gene3D G3DSA:1.10.510.10 101 228 1.6E-17 T 25-04-2017 CLFO_RS20025 55df64a1e361c28b5c590c5990de35af 300 Pfam PF00069 Protein kinase domain 21 227 8.6E-24 T 25-04-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLFO_RS20025 55df64a1e361c28b5c590c5990de35af 300 Gene3D G3DSA:3.30.200.20 17 100 1.2E-14 T 25-04-2017 CLFO_RS20025 55df64a1e361c28b5c590c5990de35af 300 SMART SM00220 21 261 3.2E-10 T 25-04-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CLFO_RS13015 7b5b4178ba0b117df57231cee6363d76 321 Pfam PF14478 Domain of unknown function (DUF4430) 62 133 3.4E-13 T 25-04-2017 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 CLFO_RS10830 7c46219dafa7c295655430767034d4a0 245 PRINTS PR00127 Clp protease catalytic subunit P signature 204 223 5.6E-6 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS10830 7c46219dafa7c295655430767034d4a0 245 PRINTS PR00127 Clp protease catalytic subunit P signature 122 139 5.6E-6 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS10830 7c46219dafa7c295655430767034d4a0 245 PRINTS PR00127 Clp protease catalytic subunit P signature 91 111 5.6E-6 T 25-04-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CLFO_RS10830 7c46219dafa7c295655430767034d4a0 245 Gene3D G3DSA:3.90.226.10 40 227 9.1E-24 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS10830 7c46219dafa7c295655430767034d4a0 245 SUPERFAMILY SSF52096 40 234 5.15E-39 T 25-04-2017 IPR029045 ClpP/crotonase-like domain CLFO_RS10830 7c46219dafa7c295655430767034d4a0 245 Pfam PF00574 Clp protease 59 226 5.8E-26 T 25-04-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLFO_RS01610 93b390734b146eaafde0feeebfdbe1ee 393 Pfam PF13458 Periplasmic binding protein 43 382 1.2E-56 T 25-04-2017 IPR028081 Leucine-binding protein domain CLFO_RS01610 93b390734b146eaafde0feeebfdbe1ee 393 SUPERFAMILY SSF53822 41 388 1.26E-84 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS01610 93b390734b146eaafde0feeebfdbe1ee 393 Gene3D G3DSA:3.40.50.2300 42 240 4.8E-48 T 25-04-2017 CLFO_RS19860 7d0229007ed1ed848fc4edf13c6fde04 158 Pfam PF02559 CarD-like/TRCF domain 2 109 1.2E-16 T 25-04-2017 IPR003711 CarD-like/TRCF domain CLFO_RS19860 7d0229007ed1ed848fc4edf13c6fde04 158 SUPERFAMILY SSF141259 1 65 9.55E-14 T 25-04-2017 IPR003711 CarD-like/TRCF domain CLFO_RS19860 7d0229007ed1ed848fc4edf13c6fde04 158 SMART SM01058 1 111 6.5E-37 T 25-04-2017 IPR003711 CarD-like/TRCF domain CLFO_RS02335 a448a634a66df6022a4bcc27bd1264ca 140 SUPERFAMILY SSF47240 3 128 7.03E-37 T 25-04-2017 IPR009078 Ferritin-like superfamily CLFO_RS02335 a448a634a66df6022a4bcc27bd1264ca 140 Gene3D G3DSA:1.20.1260.10 3 128 8.8E-45 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS02335 a448a634a66df6022a4bcc27bd1264ca 140 Pfam PF02915 Rubrerythrin 76 133 6.9E-8 T 25-04-2017 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLFO_RS02335 a448a634a66df6022a4bcc27bd1264ca 140 Pfam PF02915 Rubrerythrin 10 74 1.4E-13 T 25-04-2017 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLFO_RS08580 aef6ca474d40e2f8213a830a60e64dc4 122 SUPERFAMILY SSF81301 5 118 8.5E-38 T 25-04-2017 CLFO_RS08580 aef6ca474d40e2f8213a830a60e64dc4 122 Gene3D G3DSA:3.30.460.10 8 109 9.9E-35 T 25-04-2017 CLFO_RS08580 aef6ca474d40e2f8213a830a60e64dc4 122 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 107 23.859 T 25-04-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CLFO_RS08580 aef6ca474d40e2f8213a830a60e64dc4 122 Pfam PF02410 Ribosomal silencing factor during starvation 11 106 7.9E-25 T 25-04-2017 CLFO_RS08580 aef6ca474d40e2f8213a830a60e64dc4 122 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 9 106 8.1E-35 T 25-04-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CLFO_RS07405 b2c2468af8fdfeac0d36e1b29d369ef8 141 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 12 93 8.8E-5 T 25-04-2017 IPR010064 Bacteriophage HK97-gp10, putative tail-component CLFO_RS11940 40f88296cc2708b1ba91a296e512831f 193 Pfam PF10080 Predicted membrane protein (DUF2318) 87 190 2.3E-13 T 25-04-2017 IPR018758 Domain of unknown function DUF2318, membrane CLFO_RS05375 6b9c536bd934daf9f2d8dc964e0aff4a 388 Pfam PF01546 Peptidase family M20/M25/M40 72 383 8.3E-32 T 25-04-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CLFO_RS05375 6b9c536bd934daf9f2d8dc964e0aff4a 388 Pfam PF07687 Peptidase dimerisation domain 187 274 2.4E-9 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS05375 6b9c536bd934daf9f2d8dc964e0aff4a 388 Gene3D G3DSA:3.40.630.10 299 382 1.0E-92 T 25-04-2017 CLFO_RS05375 6b9c536bd934daf9f2d8dc964e0aff4a 388 Gene3D G3DSA:3.40.630.10 3 179 1.0E-92 T 25-04-2017 CLFO_RS05375 6b9c536bd934daf9f2d8dc964e0aff4a 388 PIRSF PIRSF005962 1 386 1.0E-127 T 25-04-2017 IPR017439 Amidohydrolase GO:0016787 CLFO_RS05375 6b9c536bd934daf9f2d8dc964e0aff4a 388 Gene3D G3DSA:3.30.70.360 184 298 4.6E-35 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS05375 6b9c536bd934daf9f2d8dc964e0aff4a 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 371 4.2E-105 T 25-04-2017 IPR017439 Amidohydrolase GO:0016787 CLFO_RS05375 6b9c536bd934daf9f2d8dc964e0aff4a 388 SUPERFAMILY SSF55031 186 297 2.09E-27 T 25-04-2017 IPR011650 Peptidase M20, dimerisation domain CLFO_RS05375 6b9c536bd934daf9f2d8dc964e0aff4a 388 SUPERFAMILY SSF53187 5 198 2.13E-78 T 25-04-2017 CLFO_RS05375 6b9c536bd934daf9f2d8dc964e0aff4a 388 SUPERFAMILY SSF53187 299 382 2.13E-78 T 25-04-2017 CLFO_RS03235 ef7a288411da89018fa80a4071cfa6f1 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.6E-21 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS03235 ef7a288411da89018fa80a4071cfa6f1 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.6E-21 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS03235 ef7a288411da89018fa80a4071cfa6f1 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 2.6E-21 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS03235 ef7a288411da89018fa80a4071cfa6f1 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 2.6E-21 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS03235 ef7a288411da89018fa80a4071cfa6f1 103 SMART SM00418 6 84 1.7E-29 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS03235 ef7a288411da89018fa80a4071cfa6f1 103 Pfam PF01022 Bacterial regulatory protein, arsR family 13 58 5.1E-16 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS03235 ef7a288411da89018fa80a4071cfa6f1 103 Gene3D G3DSA:1.10.10.10 2 88 5.4E-33 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03235 ef7a288411da89018fa80a4071cfa6f1 103 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 25-04-2017 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 CLFO_RS03235 ef7a288411da89018fa80a4071cfa6f1 103 SUPERFAMILY SSF46785 3 90 1.05E-26 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10690 1a8274f083746265c9a980398a9b738a 220 SUPERFAMILY SSF52540 5 217 1.46E-46 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10690 1a8274f083746265c9a980398a9b738a 220 Pfam PF02224 Cytidylate kinase 6 214 1.8E-76 T 25-04-2017 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CLFO_RS10690 1a8274f083746265c9a980398a9b738a 220 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 212 2.5E-74 T 25-04-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CLFO_RS10690 1a8274f083746265c9a980398a9b738a 220 Gene3D G3DSA:3.40.50.300 5 214 1.6E-71 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10690 1a8274f083746265c9a980398a9b738a 220 Hamap MF_00238 Cytidylate kinase [cmk]. 4 218 32.456 T 25-04-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CLFO_RS06400 910d3e1533e9399ea08f1c02b3cb0ab0 258 Gene3D G3DSA:3.40.1640.10 4 159 2.4E-64 T 25-04-2017 CLFO_RS06400 910d3e1533e9399ea08f1c02b3cb0ab0 258 PIRSF PIRSF029755 1 258 2.2E-124 T 25-04-2017 IPR016938 Uncharacterised protein family UPF0317 CLFO_RS06400 910d3e1533e9399ea08f1c02b3cb0ab0 258 Pfam PF07286 Protein of unknown function (DUF1445) 107 249 1.8E-68 T 25-04-2017 IPR009906 Protein of unknown function DUF1445 CLFO_RS06400 910d3e1533e9399ea08f1c02b3cb0ab0 258 Hamap MF_01830 UPF0317 protein . 3 257 54.347 T 25-04-2017 IPR016938 Uncharacterised protein family UPF0317 CLFO_RS06400 910d3e1533e9399ea08f1c02b3cb0ab0 258 SUPERFAMILY SSF160920 5 250 3.66E-114 T 25-04-2017 CLFO_RS08005 51ed0435eda3f37f029aca2666ef5540 318 Pfam PF03050 Transposase IS66 family 47 317 5.6E-82 T 25-04-2017 IPR004291 Transposase, IS66 CLFO_RS11235 c988de50e603d52a746b519504a92fbb 123 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 3 98 2.2E-30 T 25-04-2017 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like CLFO_RS11235 c988de50e603d52a746b519504a92fbb 123 SUPERFAMILY SSF88659 4 99 4.11E-29 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS11235 c988de50e603d52a746b519504a92fbb 123 Gene3D G3DSA:1.10.10.10 3 100 2.7E-35 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS11235 c988de50e603d52a746b519504a92fbb 123 Hamap MF_00245 UPF0122 protein . 3 110 19.728 T 25-04-2017 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like CLFO_RS14090 b4defd4a4582d402e81723c089942ec9 170 SUPERFAMILY SSF55729 3 166 1.47E-43 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS14090 b4defd4a4582d402e81723c089942ec9 170 Gene3D G3DSA:3.40.630.30 3 167 1.8E-46 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS14090 b4defd4a4582d402e81723c089942ec9 170 Pfam PF13302 Acetyltransferase (GNAT) domain 5 141 2.5E-27 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS09780 7fb1c739c5b00b8da6d1d8a1dc0736bc 226 Pfam PF02631 RecX family 169 223 9.6E-7 T 25-04-2017 IPR003783 Regulatory protein RecX GO:0006282 CLFO_RS09780 7fb1c739c5b00b8da6d1d8a1dc0736bc 226 Pfam PF02631 RecX family 37 155 4.5E-25 T 25-04-2017 IPR003783 Regulatory protein RecX GO:0006282 CLFO_RS09780 7fb1c739c5b00b8da6d1d8a1dc0736bc 226 Hamap MF_01114 Regulatory protein RecX [recX]. 2 162 14.779 T 25-04-2017 IPR003783 Regulatory protein RecX GO:0006282 CLFO_RS09780 7fb1c739c5b00b8da6d1d8a1dc0736bc 226 Gene3D G3DSA:1.10.10.10 61 102 3.5E-5 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS09780 7fb1c739c5b00b8da6d1d8a1dc0736bc 226 Gene3D G3DSA:1.10.10.10 15 60 6.6E-7 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15340 f3a8b74d8ecf785a012886b12a744494 194 Gene3D G3DSA:1.10.1040.10 69 187 2.7E-20 T 25-04-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLFO_RS15340 f3a8b74d8ecf785a012886b12a744494 194 SUPERFAMILY SSF48179 69 183 1.16E-12 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS15340 f3a8b74d8ecf785a012886b12a744494 194 Gene3D G3DSA:3.40.50.720 2 67 1.2E-7 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS15340 f3a8b74d8ecf785a012886b12a744494 194 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 69 187 3.5E-16 T 25-04-2017 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 CLFO_RS14065 0b4d4ca939d424f492e84711866da717 284 SUPERFAMILY SSF53335 50 277 3.01E-37 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS14065 0b4d4ca939d424f492e84711866da717 284 Pfam PF13649 Methyltransferase domain 70 164 4.8E-18 T 25-04-2017 CLFO_RS14065 0b4d4ca939d424f492e84711866da717 284 Gene3D G3DSA:3.40.50.150 234 277 2.0E-34 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS14065 0b4d4ca939d424f492e84711866da717 284 Gene3D G3DSA:3.40.50.150 40 173 2.0E-34 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS04465 855a5cac961f7b64daa9c35d4b4569ce 619 SUPERFAMILY SSF52540 18 170 6.37E-37 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04465 855a5cac961f7b64daa9c35d4b4569ce 619 Pfam PF07664 Ferrous iron transport protein B C terminus 436 486 6.0E-12 T 25-04-2017 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CLFO_RS04465 855a5cac961f7b64daa9c35d4b4569ce 619 Pfam PF02421 Ferrous iron transport protein B 18 166 8.3E-54 T 25-04-2017 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLFO_RS04465 855a5cac961f7b64daa9c35d4b4569ce 619 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 23 590 3.3E-122 T 25-04-2017 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CLFO_RS04465 855a5cac961f7b64daa9c35d4b4569ce 619 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 164 1.1E-11 T 25-04-2017 IPR005225 Small GTP-binding protein domain GO:0005525 CLFO_RS04465 855a5cac961f7b64daa9c35d4b4569ce 619 Gene3D G3DSA:3.40.50.300 17 182 4.0E-33 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04465 855a5cac961f7b64daa9c35d4b4569ce 619 Pfam PF07670 Nucleoside recognition 492 592 1.3E-10 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS04465 855a5cac961f7b64daa9c35d4b4569ce 619 Pfam PF07670 Nucleoside recognition 336 427 6.6E-14 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS04465 855a5cac961f7b64daa9c35d4b4569ce 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 40 58 3.7E-5 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS04465 855a5cac961f7b64daa9c35d4b4569ce 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 19 39 3.7E-5 T 25-04-2017 IPR006073 GTP binding domain GO:0005525 CLFO_RS17600 071e3d5cfd9a4940677a1c667695bd1a 450 Gene3D G3DSA:3.40.190.10 181 380 2.7E-32 T 25-04-2017 CLFO_RS17600 071e3d5cfd9a4940677a1c667695bd1a 450 SUPERFAMILY SSF53850 64 445 8.58E-57 T 25-04-2017 CLFO_RS17600 071e3d5cfd9a4940677a1c667695bd1a 450 Gene3D G3DSA:3.40.190.10 70 180 1.8E-11 T 25-04-2017 CLFO_RS17600 071e3d5cfd9a4940677a1c667695bd1a 450 Pfam PF13416 Bacterial extracellular solute-binding protein 75 382 1.7E-27 T 25-04-2017 CLFO_RS07430 136c004a7fc6b400f8b8277c33a7bacd 667 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 83 394 2.3E-42 T 25-04-2017 IPR010090 Phage tail tape measure protein CLFO_RS07430 136c004a7fc6b400f8b8277c33a7bacd 667 Pfam PF10145 Phage-related minor tail protein 106 300 1.2E-36 T 25-04-2017 IPR010090 Phage tail tape measure protein CLFO_RS13920 a8247f4f913928b194df731320fdbebf 226 Pfam PF00535 Glycosyl transferase family 2 13 120 3.6E-9 T 25-04-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLFO_RS13920 a8247f4f913928b194df731320fdbebf 226 SUPERFAMILY SSF53448 2 203 1.97E-23 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS13920 a8247f4f913928b194df731320fdbebf 226 Gene3D G3DSA:3.90.550.10 2 181 2.0E-17 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS06545 c2872c5a4df779ed9f9492e8294ab354 461 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 100 376 5.2E-20 T 25-04-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLFO_RS06545 c2872c5a4df779ed9f9492e8294ab354 461 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 175 456 9.4E-44 T 25-04-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CLFO_RS06545 c2872c5a4df779ed9f9492e8294ab354 461 SUPERFAMILY SSF111369 185 381 3.53E-19 T 25-04-2017 CLFO_RS06545 c2872c5a4df779ed9f9492e8294ab354 461 SUPERFAMILY SSF111369 103 152 3.53E-19 T 25-04-2017 CLFO_RS06545 c2872c5a4df779ed9f9492e8294ab354 461 Gene3D G3DSA:2.40.50.100 114 149 4.4E-13 T 25-04-2017 CLFO_RS06545 c2872c5a4df779ed9f9492e8294ab354 461 Gene3D G3DSA:2.40.50.100 271 302 4.4E-13 T 25-04-2017 CLFO_RS10070 172fdde365b8a38472e69c6512c78238 93 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 66 3.0E-20 T 25-04-2017 CLFO_RS10070 172fdde365b8a38472e69c6512c78238 93 SUPERFAMILY SSF143414 4 89 7.32E-32 T 25-04-2017 CLFO_RS10070 172fdde365b8a38472e69c6512c78238 93 SMART SM00877 4 80 2.7E-35 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS10070 172fdde365b8a38472e69c6512c78238 93 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 25-04-2017 IPR020808 Bacterial microcompartments protein, conserved site CLFO_RS10070 172fdde365b8a38472e69c6512c78238 93 Pfam PF00936 BMC domain 5 80 6.7E-28 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS01940 e7975927f4dc0a43578b7c8563e0ee44 94 Pfam PF07875 Coat F domain 10 71 3.1E-24 T 25-04-2017 IPR012851 Spore coat protein CotF-like CLFO_RS17835 c7a98060bf183d64258c10090d8628ea 930 Pfam PF09992 Phosphodiester glycosidase 204 381 1.7E-31 T 25-04-2017 IPR018711 Phosphodiester glycosidase CLFO_RS04890 831a4401561346a55e088b848becb8ff 228 Gene3D G3DSA:3.40.50.300 5 221 6.6E-57 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04890 831a4401561346a55e088b848becb8ff 228 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS04890 831a4401561346a55e088b848becb8ff 228 Pfam PF00005 ABC transporter 22 172 3.8E-25 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS04890 831a4401561346a55e088b848becb8ff 228 SUPERFAMILY SSF52540 5 224 2.3E-52 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04890 831a4401561346a55e088b848becb8ff 228 SMART SM00382 31 228 1.0E-5 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 SUPERFAMILY SSF54106 32 78 4.97E-9 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 SUPERFAMILY SSF54106 83 129 7.59E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 SUPERFAMILY SSF54106 206 252 2.62E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 Gene3D G3DSA:3.10.350.10 30 79 9.4E-13 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 Gene3D G3DSA:3.10.350.10 135 182 4.1E-13 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 Gene3D G3DSA:3.10.350.10 84 130 1.2E-13 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 Gene3D G3DSA:3.10.350.10 206 253 4.7E-13 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 SUPERFAMILY SSF54106 135 181 8.24E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 SMART SM00257 33 78 2.0E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 SMART SM00257 85 129 3.5E-14 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 SMART SM00257 208 252 9.2E-13 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 SMART SM00257 137 181 2.7E-12 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 Pfam PF01476 LysM domain 209 252 2.3E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 Pfam PF01476 LysM domain 34 78 2.8E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 Pfam PF01476 LysM domain 86 129 1.1E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS17815 b93932f1357759bfd480c41cbe72b75d 397 Pfam PF01476 LysM domain 138 181 7.3E-11 T 25-04-2017 IPR018392 LysM domain CLFO_RS20910 6b28c7a08c30e1b1ad74f06f0fffd7ec 542 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 171 4.0E-11 T 25-04-2017 IPR024474 Zinc-finger binding domain of transposase IS66 CLFO_RS20910 6b28c7a08c30e1b1ad74f06f0fffd7ec 542 Pfam PF03050 Transposase IS66 family 191 482 2.8E-84 T 25-04-2017 IPR004291 Transposase, IS66 CLFO_RS03340 b5383b7a7f14e5a7efa1a34c2a49d915 101 SUPERFAMILY SSF81301 10 93 2.77E-17 T 25-04-2017 CLFO_RS03340 b5383b7a7f14e5a7efa1a34c2a49d915 101 Gene3D G3DSA:3.30.460.10 3 100 3.1E-26 T 25-04-2017 CLFO_RS03340 b5383b7a7f14e5a7efa1a34c2a49d915 101 Pfam PF01909 Nucleotidyltransferase domain 10 87 2.8E-11 T 25-04-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CLFO_RS07190 a5aa347aa24c414abf9de0d875681434 63 Gene3D G3DSA:1.20.1260.10 13 60 1.8E-4 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS06720 c4405489b7dbd74546b1427754026935 133 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 125 1.4E-29 T 25-04-2017 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CLFO_RS06720 c4405489b7dbd74546b1427754026935 133 SUPERFAMILY SSF55811 2 125 6.63E-33 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS06720 c4405489b7dbd74546b1427754026935 133 Gene3D G3DSA:3.90.79.10 3 129 3.0E-32 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS06720 c4405489b7dbd74546b1427754026935 133 Pfam PF00293 NUDIX domain 4 123 1.7E-17 T 25-04-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CLFO_RS06720 c4405489b7dbd74546b1427754026935 133 PRINTS PR00502 NUDIX hydrolase family signature 45 60 3.4E-7 T 25-04-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CLFO_RS06720 c4405489b7dbd74546b1427754026935 133 PRINTS PR00502 NUDIX hydrolase family signature 31 45 3.4E-7 T 25-04-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CLFO_RS13870 707e76c0fa59a29360c86a118fd44091 182 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 14 97 6.9E-19 T 25-04-2017 IPR004474 Cell envelope-related transcriptional attenuator domain CLFO_RS13870 707e76c0fa59a29360c86a118fd44091 182 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 13 97 3.5E-20 T 25-04-2017 IPR004474 Cell envelope-related transcriptional attenuator domain CLFO_RS16020 25634ac52f2584715ceb175272dc1cb4 259 SUPERFAMILY SSF53067 1 251 6.24E-31 T 25-04-2017 CLFO_RS16020 25634ac52f2584715ceb175272dc1cb4 259 Gene3D G3DSA:3.30.420.40 99 229 4.3E-34 T 25-04-2017 CLFO_RS16020 25634ac52f2584715ceb175272dc1cb4 259 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 244 8.0E-34 T 25-04-2017 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLFO_RS16020 25634ac52f2584715ceb175272dc1cb4 259 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 245 1.1E-56 T 25-04-2017 IPR008275 CoA enzyme activase CLFO_RS08530 6edc93a28cef9a514d3e4439820e1553 110 Gene3D G3DSA:3.30.70.1490 9 107 6.4E-18 T 25-04-2017 CLFO_RS08530 6edc93a28cef9a514d3e4439820e1553 110 SUPERFAMILY SSF118010 1 109 3.01E-31 T 25-04-2017 CLFO_RS08530 6edc93a28cef9a514d3e4439820e1553 110 Pfam PF04327 Cysteine peptidase C108, N-terminal of ribosomal L27 1 104 3.1E-27 T 25-04-2017 IPR007422 Cysteine peptidase C108, N-terminal of ribosomal L27 CLFO_RS00595 4d4f0e26e7a5ecf9807702fbde83ec79 332 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 73 327 2.0E-63 T 25-04-2017 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 CLFO_RS00595 4d4f0e26e7a5ecf9807702fbde83ec79 332 Pfam PF08486 Stage II sporulation protein 69 157 1.3E-19 T 25-04-2017 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal CLFO_RS02535 9e44a829173c9450ad69099d71ab2ce2 104 Gene3D G3DSA:3.40.50.450 39 80 6.2E-4 T 25-04-2017 CLFO_RS09045 c2e778264507fbcf6c1cb3aa287ceeb1 410 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 220 236 - T 25-04-2017 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CLFO_RS09045 c2e778264507fbcf6c1cb3aa287ceeb1 410 Pfam PF00464 Serine hydroxymethyltransferase 6 382 6.3E-183 T 25-04-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CLFO_RS09045 c2e778264507fbcf6c1cb3aa287ceeb1 410 Gene3D G3DSA:3.90.1150.10 282 410 1.5E-56 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS09045 c2e778264507fbcf6c1cb3aa287ceeb1 410 PIRSF PIRSF000412 1 410 9.7E-176 T 25-04-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CLFO_RS09045 c2e778264507fbcf6c1cb3aa287ceeb1 410 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 5 410 53.522 T 25-04-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CLFO_RS09045 c2e778264507fbcf6c1cb3aa287ceeb1 410 Gene3D G3DSA:3.40.640.10 35 281 2.1E-107 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS09045 c2e778264507fbcf6c1cb3aa287ceeb1 410 SUPERFAMILY SSF53383 4 409 3.06E-184 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS04740 d9bd2ae39590bc2a89f679e522eaa251 127 Pfam PF01695 IstB-like ATP binding protein 38 95 7.0E-18 T 25-04-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 CLFO_RS04740 d9bd2ae39590bc2a89f679e522eaa251 127 Gene3D G3DSA:3.40.50.300 33 95 5.4E-4 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20475 a2f98b976229cda1a832ef727cecfdb1 437 Pfam PF01964 Radical SAM ThiC family 5 422 1.3E-197 T 25-04-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CLFO_RS20475 a2f98b976229cda1a832ef727cecfdb1 437 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 4 428 54.219 T 25-04-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CLFO_RS20475 a2f98b976229cda1a832ef727cecfdb1 437 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 5 424 3.1E-180 T 25-04-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CLFO_RS08300 93c41d336a409fac0869f143c3577afc 156 SUPERFAMILY SSF55826 6 154 3.92E-36 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS08300 93c41d336a409fac0869f143c3577afc 156 Gene3D G3DSA:3.90.960.10 3 154 1.8E-42 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS08300 93c41d336a409fac0869f143c3577afc 156 Pfam PF04073 Aminoacyl-tRNA editing domain 28 142 3.7E-27 T 25-04-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CLFO_RS09795 45e9c60bef32b037bd86e3468dca5799 225 Gene3D G3DSA:3.90.550.10 5 223 9.5E-21 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS09795 45e9c60bef32b037bd86e3468dca5799 225 Pfam PF00535 Glycosyl transferase family 2 7 131 3.4E-27 T 25-04-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLFO_RS09795 45e9c60bef32b037bd86e3468dca5799 225 SUPERFAMILY SSF53448 4 222 3.32E-32 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS19305 b98e681ba1f8ca21ce017a8c3f355415 217 Gene3D G3DSA:2.40.30.20 5 102 5.1E-34 T 25-04-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 CLFO_RS19305 b98e681ba1f8ca21ce017a8c3f355415 217 Pfam PF00677 Lumazine binding domain 99 183 2.5E-20 T 25-04-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS19305 b98e681ba1f8ca21ce017a8c3f355415 217 Pfam PF00677 Lumazine binding domain 3 86 6.8E-23 T 25-04-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS19305 b98e681ba1f8ca21ce017a8c3f355415 217 PIRSF PIRSF000498 1 210 4.4E-79 T 25-04-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS19305 b98e681ba1f8ca21ce017a8c3f355415 217 Gene3D G3DSA:2.40.30.20 103 194 5.0E-30 T 25-04-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 CLFO_RS19305 b98e681ba1f8ca21ce017a8c3f355415 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 2 198 7.4E-74 T 25-04-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CLFO_RS19305 b98e681ba1f8ca21ce017a8c3f355415 217 SUPERFAMILY SSF63380 2 91 7.82E-26 T 25-04-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLFO_RS19305 b98e681ba1f8ca21ce017a8c3f355415 217 SUPERFAMILY SSF63380 92 194 8.5E-33 T 25-04-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CLFO_RS00175 426e4158f2ceeede02ca02677acd96ed 94 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 2.6E-27 T 25-04-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00175 426e4158f2ceeede02ca02677acd96ed 94 SUPERFAMILY SSF54995 1 94 5.49E-33 T 25-04-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00175 426e4158f2ceeede02ca02677acd96ed 94 Pfam PF01250 Ribosomal protein S6 3 91 2.9E-32 T 25-04-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS00175 426e4158f2ceeede02ca02677acd96ed 94 Gene3D G3DSA:3.30.70.60 1 94 2.8E-36 T 25-04-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CLFO_RS00175 426e4158f2ceeede02ca02677acd96ed 94 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.02 T 25-04-2017 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CLFO_RS03615 a859d607dc7d81c7408fa8abe3736c17 279 Pfam PF03575 Peptidase family S51 9 210 4.2E-25 T 25-04-2017 IPR005320 Peptidase S51 GO:0006508|GO:0008236 CLFO_RS03615 a859d607dc7d81c7408fa8abe3736c17 279 SUPERFAMILY SSF52317 9 223 5.04E-27 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS03615 a859d607dc7d81c7408fa8abe3736c17 279 PIRSF PIRSF032067 2 269 4.8E-73 T 25-04-2017 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 CLFO_RS03615 a859d607dc7d81c7408fa8abe3736c17 279 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 9 258 7.8E-101 T 25-04-2017 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 CLFO_RS03615 a859d607dc7d81c7408fa8abe3736c17 279 Gene3D G3DSA:3.40.50.880 9 226 1.4E-30 T 25-04-2017 IPR029062 Class I glutamine amidotransferase-like CLFO_RS04325 15e8b89082df8acc219ecc96fd725ff2 186 Pfam PF01814 Hemerythrin HHE cation binding domain 4 138 1.7E-16 T 25-04-2017 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 CLFO_RS04325 15e8b89082df8acc219ecc96fd725ff2 186 Gene3D G3DSA:1.20.120.520 4 156 3.7E-19 T 25-04-2017 CLFO_RS18885 446811e20fd2e3e2aa0cc79caa83474c 302 Pfam PF01515 Phosphate acetyl/butaryl transferase 76 293 5.1E-47 T 25-04-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLFO_RS18885 446811e20fd2e3e2aa0cc79caa83474c 302 PIRSF PIRSF000428 1 300 1.5E-86 T 25-04-2017 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLFO_RS18885 446811e20fd2e3e2aa0cc79caa83474c 302 SUPERFAMILY SSF53659 4 298 2.01E-64 T 25-04-2017 CLFO_RS18885 446811e20fd2e3e2aa0cc79caa83474c 302 Gene3D G3DSA:3.40.50.10750 113 271 2.0E-46 T 25-04-2017 CLFO_RS09945 1f7f4740fec29ad281d68ec9fdecd25d 484 PIRSF PIRSF006603 29 483 1.6E-56 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS09945 1f7f4740fec29ad281d68ec9fdecd25d 484 Pfam PF01554 MatE 55 216 1.8E-25 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS09945 1f7f4740fec29ad281d68ec9fdecd25d 484 Pfam PF01554 MatE 293 434 6.6E-15 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS20390 bd0efdf8293b9d291897cb3c5a26660a 161 Pfam PF08761 dUTPase 2 161 6.1E-46 T 25-04-2017 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 CLFO_RS20390 bd0efdf8293b9d291897cb3c5a26660a 161 PIRSF PIRSF030140 1 161 7.5E-54 T 25-04-2017 IPR016947 Uncharacterised phage-associated protein UCP030140 CLFO_RS20390 bd0efdf8293b9d291897cb3c5a26660a 161 SUPERFAMILY SSF101386 3 161 3.44E-41 T 25-04-2017 CLFO_RS02625 a5f7b60b38d6530b462b93585755b1cf 65 Pfam PF10055 Uncharacterized small protein (DUF2292) 29 58 1.3E-5 T 25-04-2017 IPR018743 Protein of unknown function DUF2292 CLFO_RS05270 340db0a7d384948421e4d6963543735e 433 SUPERFAMILY SSF53474 210 291 2.17E-23 T 25-04-2017 IPR029058 Alpha/Beta hydrolase fold CLFO_RS05270 340db0a7d384948421e4d6963543735e 433 SUPERFAMILY SSF53474 4 182 2.17E-23 T 25-04-2017 IPR029058 Alpha/Beta hydrolase fold CLFO_RS05270 340db0a7d384948421e4d6963543735e 433 Pfam PF02450 Lecithin:cholesterol acyltransferase 36 140 4.0E-12 T 25-04-2017 IPR003386 Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase GO:0006629|GO:0008374 CLFO_RS05270 340db0a7d384948421e4d6963543735e 433 Gene3D G3DSA:3.40.50.1820 231 306 2.5E-25 T 25-04-2017 IPR029058 Alpha/Beta hydrolase fold CLFO_RS05270 340db0a7d384948421e4d6963543735e 433 Gene3D G3DSA:3.40.50.1820 5 136 2.5E-25 T 25-04-2017 IPR029058 Alpha/Beta hydrolase fold CLFO_RS01520 eef3dd9537c0c32fc9e9112665a06c4f 430 Gene3D G3DSA:3.40.50.720 3 52 1.1E-4 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01520 eef3dd9537c0c32fc9e9112665a06c4f 430 Pfam PF13353 4Fe-4S single cluster domain 127 194 9.5E-5 T 25-04-2017 CLFO_RS01520 eef3dd9537c0c32fc9e9112665a06c4f 430 SUPERFAMILY SSF102114 124 389 1.44E-17 T 25-04-2017 CLFO_RS01520 eef3dd9537c0c32fc9e9112665a06c4f 430 Gene3D G3DSA:3.20.20.70 124 396 3.0E-21 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS02575 4d720ced6ce6a71e70face6f6f4ad804 331 SUPERFAMILY SSF111331 4 23 1.66E-6 T 25-04-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain CLFO_RS02575 4d720ced6ce6a71e70face6f6f4ad804 331 SUPERFAMILY SSF111331 73 154 1.66E-6 T 25-04-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain CLFO_RS02575 4d720ced6ce6a71e70face6f6f4ad804 331 Gene3D G3DSA:3.40.50.10330 93 135 1.8E-4 T 25-04-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLFO_RS02575 4d720ced6ce6a71e70face6f6f4ad804 331 PIRSF PIRSF018567 1 330 1.9E-121 T 25-04-2017 IPR011391 Acetoin catabolism kinase AcoX CLFO_RS02575 4d720ced6ce6a71e70face6f6f4ad804 331 Pfam PF01513 ATP-NAD kinase 4 224 1.8E-17 T 25-04-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CLFO_RS18390 1506ba932c2d1d6dda8338557b41f41d 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 25-04-2017 IPR023187 Transcriptional regulator MarR-type, conserved site CLFO_RS18390 1506ba932c2d1d6dda8338557b41f41d 145 Gene3D G3DSA:1.10.10.10 4 144 5.2E-34 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18390 1506ba932c2d1d6dda8338557b41f41d 145 Pfam PF12802 MarR family 31 94 7.5E-14 T 25-04-2017 CLFO_RS18390 1506ba932c2d1d6dda8338557b41f41d 145 SUPERFAMILY SSF46785 5 144 1.12E-30 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18390 1506ba932c2d1d6dda8338557b41f41d 145 SMART SM00347 25 130 2.6E-23 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS18390 1506ba932c2d1d6dda8338557b41f41d 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 7.1E-14 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS18390 1506ba932c2d1d6dda8338557b41f41d 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 7.1E-14 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS18390 1506ba932c2d1d6dda8338557b41f41d 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 7.1E-14 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS18390 1506ba932c2d1d6dda8338557b41f41d 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 7.1E-14 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS06910 a6a0a0e29f2dbcc76372cc8c96a60cf0 153 SUPERFAMILY SSF103039 1 151 1.96E-34 T 25-04-2017 IPR028976 CheC-like domain CLFO_RS06910 a6a0a0e29f2dbcc76372cc8c96a60cf0 153 Pfam PF13690 Chemotaxis phosphatase CheX 44 127 7.8E-16 T 25-04-2017 IPR028051 Chemotaxis phosphatase CheX-like domain CLFO_RS06910 a6a0a0e29f2dbcc76372cc8c96a60cf0 153 Gene3D G3DSA:3.40.1550.10 1 152 7.7E-37 T 25-04-2017 IPR028976 CheC-like domain CLFO_RS08310 1e9f078864d3da1886185d2c608e6835 242 Pfam PF07099 Protein of unknown function (DUF1361) 36 217 1.1E-37 T 25-04-2017 IPR009793 Protein of unknown function DUF1361 CLFO_RS12200 51687c1fbe897365513982ccb2d91259 275 SUPERFAMILY SSF161098 5 275 1.57E-65 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12200 51687c1fbe897365513982ccb2d91259 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 266 3.1E-19 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12200 51687c1fbe897365513982ccb2d91259 275 Gene3D G3DSA:1.10.3720.10 5 262 1.3E-60 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS01510 ac133c5e83652fad5fd2e41eddddaada 375 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 3 294 1.3E-66 T 25-04-2017 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase CLFO_RS01510 ac133c5e83652fad5fd2e41eddddaada 375 SUPERFAMILY SSF53756 15 356 2.37E-14 T 25-04-2017 CLFO_RS01510 ac133c5e83652fad5fd2e41eddddaada 375 Gene3D G3DSA:3.40.50.2000 165 334 9.8E-10 T 25-04-2017 CLFO_RS06335 7108c6d9f0c61b782a876e9c329b3b17 139 Pfam PF13789 Domain of unknown function (DUF4181) 24 124 9.6E-18 T 25-04-2017 IPR025441 Protein of unknown function DUF4181 CLFO_RS04860 0686f0bbd3872d1521114aebad383d7e 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 24.683 T 25-04-2017 IPR002765 Uncharacterised protein family UPF0145 CLFO_RS04860 0686f0bbd3872d1521114aebad383d7e 106 Pfam PF01906 Putative heavy-metal-binding 1 103 7.4E-39 T 25-04-2017 IPR002765 Uncharacterised protein family UPF0145 CLFO_RS04860 0686f0bbd3872d1521114aebad383d7e 106 Gene3D G3DSA:3.30.110.70 1 103 1.1E-36 T 25-04-2017 IPR002765 Uncharacterised protein family UPF0145 CLFO_RS04860 0686f0bbd3872d1521114aebad383d7e 106 SUPERFAMILY SSF117782 1 105 2.75E-36 T 25-04-2017 IPR002765 Uncharacterised protein family UPF0145 CLFO_RS18410 4a9a21cb3f564bd4dad66553d9efa1b9 303 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 303 147.688 T 25-04-2017 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CLFO_RS18410 4a9a21cb3f564bd4dad66553d9efa1b9 303 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 16 290 1.9E-98 T 25-04-2017 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CLFO_RS18410 4a9a21cb3f564bd4dad66553d9efa1b9 303 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 18 289 5.9E-85 T 25-04-2017 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CLFO_RS09950 7c6b064ad2cf14e4883157c12cbf8112 728 SUPERFAMILY SSF56719 6 480 2.09E-120 T 25-04-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CLFO_RS09950 7c6b064ad2cf14e4883157c12cbf8112 728 Gene3D G3DSA:3.30.1360.40 231 324 4.9E-27 T 25-04-2017 IPR024946 Arginine repressor C-terminal-like domain CLFO_RS09950 7c6b064ad2cf14e4883157c12cbf8112 728 Gene3D G3DSA:2.120.10.90 490 692 5.9E-36 T 25-04-2017 CLFO_RS09950 7c6b064ad2cf14e4883157c12cbf8112 728 SUPERFAMILY SSF101904 492 710 6.02E-39 T 25-04-2017 CLFO_RS09950 7c6b064ad2cf14e4883157c12cbf8112 728 Gene3D G3DSA:3.90.199.10 325 389 6.7E-74 T 25-04-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09950 7c6b064ad2cf14e4883157c12cbf8112 728 Gene3D G3DSA:3.90.199.10 27 230 6.7E-74 T 25-04-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09950 7c6b064ad2cf14e4883157c12cbf8112 728 SMART SM00434 8 456 3.2E-116 T 25-04-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS09950 7c6b064ad2cf14e4883157c12cbf8112 728 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 463 1.9E-124 T 25-04-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CLFO_RS01070 d8e8bdc7f494304d0cd82a00bcd39a3c 89 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 80 1.2E-43 T 25-04-2017 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID CLFO_RS01070 d8e8bdc7f494304d0cd82a00bcd39a3c 89 Pfam PF12116 Stage III sporulation protein D 2 81 2.7E-43 T 25-04-2017 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID CLFO_RS01070 d8e8bdc7f494304d0cd82a00bcd39a3c 89 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 25-04-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CLFO_RS05600 2913554684440f5e3c044607915693a0 210 Pfam PF04961 Formiminotransferase-cyclodeaminase 10 187 1.3E-64 T 25-04-2017 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 CLFO_RS05600 2913554684440f5e3c044607915693a0 210 SUPERFAMILY SSF101262 3 208 1.96E-59 T 25-04-2017 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 CLFO_RS04555 f7c1dd30dc113962f22d034337d7e061 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 163 174 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS04555 f7c1dd30dc113962f22d034337d7e061 231 Gene3D G3DSA:1.10.1060.10 146 225 4.9E-9 T 25-04-2017 CLFO_RS04555 f7c1dd30dc113962f22d034337d7e061 231 SUPERFAMILY SSF54862 157 226 1.0E-7 T 25-04-2017 CLFO_RS19825 dcd59527e37d3b0fa1d559d0016906f6 226 SUPERFAMILY SSF51161 5 171 6.93E-57 T 25-04-2017 IPR011004 Trimeric LpxA-like CLFO_RS19825 dcd59527e37d3b0fa1d559d0016906f6 226 Pfam PF06426 Serine acetyltransferase, N-terminal 6 38 3.9E-6 T 25-04-2017 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CLFO_RS19825 dcd59527e37d3b0fa1d559d0016906f6 226 Gene3D G3DSA:2.160.10.10 62 218 1.3E-37 T 25-04-2017 CLFO_RS19825 dcd59527e37d3b0fa1d559d0016906f6 226 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 154 2.4E-9 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS19825 dcd59527e37d3b0fa1d559d0016906f6 226 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 74 111 2.7E-7 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS19825 dcd59527e37d3b0fa1d559d0016906f6 226 Gene3D G3DSA:1.10.3130.10 4 61 1.6E-28 T 25-04-2017 CLFO_RS19825 dcd59527e37d3b0fa1d559d0016906f6 226 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 8 169 3.8E-76 T 25-04-2017 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CLFO_RS05070 f2358de07c425a3f2b012feedf0bc110 333 SUPERFAMILY SSF58104 8 98 2.88E-30 T 25-04-2017 CLFO_RS05070 f2358de07c425a3f2b012feedf0bc110 333 Gene3D G3DSA:1.10.287.950 10 95 1.7E-28 T 25-04-2017 CLFO_RS05070 f2358de07c425a3f2b012feedf0bc110 333 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 8 95 4.5E-26 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS05070 f2358de07c425a3f2b012feedf0bc110 333 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 57 86 2.5E-15 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS05070 f2358de07c425a3f2b012feedf0bc110 333 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 28 55 2.5E-15 T 25-04-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CLFO_RS05070 f2358de07c425a3f2b012feedf0bc110 333 Gene3D G3DSA:3.30.450.20 201 331 7.4E-14 T 25-04-2017 CLFO_RS05070 f2358de07c425a3f2b012feedf0bc110 333 Pfam PF02743 Cache domain 119 329 3.5E-25 T 25-04-2017 IPR033479 Double Cache domain 1 CLFO_RS05070 f2358de07c425a3f2b012feedf0bc110 333 SUPERFAMILY SSF103190 133 245 2.16E-10 T 25-04-2017 IPR029151 Periplasmic sensor domain-like CLFO_RS06630 ae5716bc518b49a4e97f9ac778a46b61 643 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 127 558 5.7E-88 T 25-04-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLFO_RS06630 ae5716bc518b49a4e97f9ac778a46b61 643 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 29 637 2.7E-204 T 25-04-2017 IPR011853 TRAP transporter, 4TM/12TM fusion protein CLFO_RS02785 a50f51f8e2a993762429978be2eaf1ac 171 SUPERFAMILY SSF81324 10 127 2.51E-8 T 25-04-2017 CLFO_RS02785 a50f51f8e2a993762429978be2eaf1ac 171 Gene3D G3DSA:1.20.120.350 17 103 1.1E-10 T 25-04-2017 IPR027359 Voltage-dependent channel, four helix bundle domain CLFO_RS17330 562280e06fe33651089c7a8a01e79724 2638 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 2377 2440 8.9E-17 T 25-04-2017 IPR013378 Listeria/Bacterioides repeat CLFO_RS17330 562280e06fe33651089c7a8a01e79724 2638 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 2405 2444 1.9E-8 T 25-04-2017 IPR013378 Listeria/Bacterioides repeat CLFO_RS17330 562280e06fe33651089c7a8a01e79724 2638 SUPERFAMILY SSF49299 577 668 6.67E-6 T 25-04-2017 IPR000601 PKD domain CLFO_RS17260 3e9dc8971e2b038086cc2ea9951dcbf7 625 Pfam PF10593 Z1 domain 259 457 2.6E-30 T 25-04-2017 IPR018310 Putative endonuclease, Z1 domain CLFO_RS17260 3e9dc8971e2b038086cc2ea9951dcbf7 625 SUPERFAMILY SSF52540 45 199 1.85E-7 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17260 3e9dc8971e2b038086cc2ea9951dcbf7 625 SUPERFAMILY SSF52540 302 403 1.85E-7 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02070 06f4e5d6d19f82edfa34ce1b8d99914f 265 SMART SM00382 30 217 3.2E-13 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS02070 06f4e5d6d19f82edfa34ce1b8d99914f 265 Pfam PF00005 ABC transporter 21 169 9.9E-37 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS02070 06f4e5d6d19f82edfa34ce1b8d99914f 265 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS02070 06f4e5d6d19f82edfa34ce1b8d99914f 265 SUPERFAMILY SSF52540 1 239 1.09E-85 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02070 06f4e5d6d19f82edfa34ce1b8d99914f 265 Gene3D G3DSA:3.40.50.300 1 241 3.3E-88 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17245 bf8f75402d8abf89a0961d62fa6b92c4 136 Pfam PF08281 Sigma-70, region 4 76 126 4.3E-7 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS17245 bf8f75402d8abf89a0961d62fa6b92c4 136 Gene3D G3DSA:1.10.10.10 76 132 2.1E-10 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS17245 bf8f75402d8abf89a0961d62fa6b92c4 136 SUPERFAMILY SSF88659 72 131 3.74E-10 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20855 2dd7743e84193a928d343eca0f7d1dc6 427 Gene3D G3DSA:1.20.1250.20 219 414 4.5E-8 T 25-04-2017 CLFO_RS20855 2dd7743e84193a928d343eca0f7d1dc6 427 Gene3D G3DSA:1.20.1250.20 11 206 2.5E-25 T 25-04-2017 CLFO_RS20855 2dd7743e84193a928d343eca0f7d1dc6 427 Pfam PF07690 Major Facilitator Superfamily 13 361 3.2E-28 T 25-04-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLFO_RS20855 2dd7743e84193a928d343eca0f7d1dc6 427 SUPERFAMILY SSF103473 6 412 1.7E-49 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS03790 a32b28f4029b597a51288accb3094daa 293 SUPERFAMILY SSF161098 50 275 6.8E-64 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS03790 a32b28f4029b597a51288accb3094daa 293 Gene3D G3DSA:1.10.3720.10 56 280 1.6E-63 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS03790 a32b28f4029b597a51288accb3094daa 293 SUPERFAMILY SSF160964 5 41 2.22E-7 T 25-04-2017 CLFO_RS03790 a32b28f4029b597a51288accb3094daa 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 278 4.6E-17 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS03790 a32b28f4029b597a51288accb3094daa 293 Gene3D G3DSA:1.20.58.370 10 40 2.4E-5 T 25-04-2017 CLFO_RS12915 733a482e56ae9cc26a916b3f6e9bfcc4 528 Gene3D G3DSA:3.10.105.10 293 485 6.8E-42 T 25-04-2017 CLFO_RS12915 733a482e56ae9cc26a916b3f6e9bfcc4 528 Gene3D G3DSA:3.90.76.10 73 152 1.6E-17 T 25-04-2017 CLFO_RS12915 733a482e56ae9cc26a916b3f6e9bfcc4 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 436 8.1E-76 T 25-04-2017 IPR000914 Solute-binding protein family 5 domain CLFO_RS12915 733a482e56ae9cc26a916b3f6e9bfcc4 528 PIRSF PIRSF002741 4 520 1.6E-74 T 25-04-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLFO_RS12915 733a482e56ae9cc26a916b3f6e9bfcc4 528 SUPERFAMILY SSF53850 64 527 9.59E-96 T 25-04-2017 CLFO_RS12915 733a482e56ae9cc26a916b3f6e9bfcc4 528 Gene3D G3DSA:3.40.190.10 153 292 2.2E-33 T 25-04-2017 CLFO_RS03900 5e9157b05cfce77e74240278f483426c 221 Pfam PF03471 Transporter associated domain 137 206 5.2E-7 T 25-04-2017 IPR005170 Transporter-associated domain CLFO_RS03900 5e9157b05cfce77e74240278f483426c 221 SUPERFAMILY SSF56176 129 214 7.09E-8 T 25-04-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CLFO_RS03900 5e9157b05cfce77e74240278f483426c 221 Gene3D G3DSA:3.30.465.10 135 215 5.6E-9 T 25-04-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CLFO_RS07015 2cae72d1b3c4eb2e0ba1adb7728e3dff 102 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 22 89 5.3E-9 T 25-04-2017 CLFO_RS07015 2cae72d1b3c4eb2e0ba1adb7728e3dff 102 SUPERFAMILY SSF52833 4 100 7.72E-30 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS07015 2cae72d1b3c4eb2e0ba1adb7728e3dff 102 Gene3D G3DSA:3.40.30.10 4 101 1.7E-37 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS16540 6f1160f434774630ec04c5bb9b98c987 316 Gene3D G3DSA:3.80.30.10 136 313 1.2E-59 T 25-04-2017 CLFO_RS16540 6f1160f434774630ec04c5bb9b98c987 316 Pfam PF04055 Radical SAM superfamily 32 249 2.6E-26 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS16540 6f1160f434774630ec04c5bb9b98c987 316 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 15 307 2.2E-115 T 25-04-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLFO_RS16540 6f1160f434774630ec04c5bb9b98c987 316 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS16540 6f1160f434774630ec04c5bb9b98c987 316 Gene3D G3DSA:3.30.70.20 61 124 2.4E-14 T 25-04-2017 CLFO_RS16540 6f1160f434774630ec04c5bb9b98c987 316 TIGRFAM TIGR04395 cutC_activ_rSAM: choline TMA-lyase-activating enzyme 10 316 2.8E-165 T 25-04-2017 IPR030905 Choline TMA-lyase-activating enzyme CLFO_RS16540 6f1160f434774630ec04c5bb9b98c987 316 SUPERFAMILY SSF54862 14 159 2.51E-22 T 25-04-2017 CLFO_RS16540 6f1160f434774630ec04c5bb9b98c987 316 Hamap MF_02059 Choline trimethylamine-lyase activating enzyme [cutD]. 8 316 60.668 T 25-04-2017 IPR030905 Choline TMA-lyase-activating enzyme CLFO_RS16540 6f1160f434774630ec04c5bb9b98c987 316 Pfam PF13353 4Fe-4S single cluster domain 25 180 8.6E-9 T 25-04-2017 CLFO_RS16540 6f1160f434774630ec04c5bb9b98c987 316 PIRSF PIRSF000371 4 305 9.2E-101 T 25-04-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLFO_RS16540 6f1160f434774630ec04c5bb9b98c987 316 ProSitePatterns PS01087 Radical activating enzymes signature. 26 47 - T 25-04-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLFO_RS08535 c70c88f4fd510c31dd2505dcd66895e1 93 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 4.3E-41 T 25-04-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS08535 c70c88f4fd510c31dd2505dcd66895e1 93 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 28.516 T 25-04-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS08535 c70c88f4fd510c31dd2505dcd66895e1 93 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 25-04-2017 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS08535 c70c88f4fd510c31dd2505dcd66895e1 93 Gene3D G3DSA:2.40.50.100 28 90 1.1E-33 T 25-04-2017 CLFO_RS08535 c70c88f4fd510c31dd2505dcd66895e1 93 Pfam PF01016 Ribosomal L27 protein 10 89 2.9E-37 T 25-04-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS08535 c70c88f4fd510c31dd2505dcd66895e1 93 SUPERFAMILY SSF110324 10 90 6.98E-34 T 25-04-2017 CLFO_RS08535 c70c88f4fd510c31dd2505dcd66895e1 93 PRINTS PR00063 Ribosomal protein L27 signature 12 36 5.4E-40 T 25-04-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS08535 c70c88f4fd510c31dd2505dcd66895e1 93 PRINTS PR00063 Ribosomal protein L27 signature 62 86 5.4E-40 T 25-04-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS08535 c70c88f4fd510c31dd2505dcd66895e1 93 PRINTS PR00063 Ribosomal protein L27 signature 37 61 5.4E-40 T 25-04-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS08535 c70c88f4fd510c31dd2505dcd66895e1 93 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 2.0E-14 T 25-04-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS21245 a9de7dd4aa9db8c6058450016f253e4a 301 Gene3D G3DSA:1.10.10.10 227 290 9.7E-8 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS21245 a9de7dd4aa9db8c6058450016f253e4a 301 SUPERFAMILY SSF88659 231 287 2.75E-8 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS16930 bdf68dc05f5fbc1685ef7fafcc051152 132 Pfam PF01797 Transposase IS200 like 13 128 3.4E-37 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS16930 bdf68dc05f5fbc1685ef7fafcc051152 132 Gene3D G3DSA:3.30.70.1290 2 131 3.7E-44 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS16930 bdf68dc05f5fbc1685ef7fafcc051152 132 SMART SM01321 12 128 1.6E-37 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS16930 bdf68dc05f5fbc1685ef7fafcc051152 132 SUPERFAMILY SSF143422 3 129 2.22E-41 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS17280 94f9ffb7738e44cef501b1d936755731 329 Pfam PF16948 Cell translocating kinase A N-terminus 6 94 9.5E-26 T 25-04-2017 IPR031603 Serine/threonine-protein kinase CtkA, N-terminal KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 CLFO_RS17280 94f9ffb7738e44cef501b1d936755731 329 Pfam PF07804 HipA-like C-terminal domain 123 194 2.8E-8 T 25-04-2017 IPR012893 HipA-like, C-terminal CLFO_RS04610 80a1f65dcf38f7de6cc699497e93c612 259 Gene3D G3DSA:3.20.20.370 21 242 2.9E-71 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS04610 80a1f65dcf38f7de6cc699497e93c612 259 Pfam PF01522 Polysaccharide deacetylase 55 175 5.9E-37 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS04610 80a1f65dcf38f7de6cc699497e93c612 259 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 54 242 2.0E-73 T 25-04-2017 IPR014132 Sporulation polysaccharide deacetylase, PdaB CLFO_RS04610 80a1f65dcf38f7de6cc699497e93c612 259 SUPERFAMILY SSF88713 50 241 1.62E-67 T 25-04-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLFO_RS12735 8882ee2ae09ec30879da2d9a12fca445 179 Pfam PF00085 Thioredoxin 61 132 5.1E-13 T 25-04-2017 IPR013766 Thioredoxin domain GO:0045454 CLFO_RS12735 8882ee2ae09ec30879da2d9a12fca445 179 SUPERFAMILY SSF52833 52 175 9.64E-19 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS12735 8882ee2ae09ec30879da2d9a12fca445 179 Gene3D G3DSA:3.40.30.10 45 175 2.3E-20 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS10460 6ef68280ba58e0304d6294adad310762 498 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 51 418 4.7E-16 T 25-04-2017 IPR021145 Portal protein, SPP1 Gp6-like CLFO_RS15120 8854dfba1bba5aae4c2397149e782cde 393 Pfam PF12698 ABC-2 family transporter protein 31 375 1.6E-20 T 25-04-2017 CLFO_RS20425 d30051f2ae830b4dfd9153ec54b6616c 316 Gene3D G3DSA:3.90.25.10 207 308 6.1E-7 T 25-04-2017 CLFO_RS20425 d30051f2ae830b4dfd9153ec54b6616c 316 SUPERFAMILY SSF51735 2 314 2.26E-60 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS20425 d30051f2ae830b4dfd9153ec54b6616c 316 Gene3D G3DSA:3.40.50.720 2 206 1.9E-48 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS20425 d30051f2ae830b4dfd9153ec54b6616c 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 240 2.2E-30 T 25-04-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CLFO_RS12105 5348cef45b2b4eb37304c9edf5036cda 356 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 8 345 3.8E-69 T 25-04-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CLFO_RS12105 5348cef45b2b4eb37304c9edf5036cda 356 SUPERFAMILY SSF51726 6 348 1.64E-51 T 25-04-2017 CLFO_RS12105 5348cef45b2b4eb37304c9edf5036cda 356 Gene3D G3DSA:3.20.20.210 2 346 1.8E-61 T 25-04-2017 CLFO_RS12615 214d7d7bb8a2a51e6dde44430c1b740e 202 SMART SM00382 26 196 3.0E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS12615 214d7d7bb8a2a51e6dde44430c1b740e 202 Pfam PF00005 ABC transporter 18 158 4.2E-32 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS12615 214d7d7bb8a2a51e6dde44430c1b740e 202 SUPERFAMILY SSF52540 1 195 1.22E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12615 214d7d7bb8a2a51e6dde44430c1b740e 202 Gene3D G3DSA:3.40.50.300 2 200 3.1E-57 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12615 214d7d7bb8a2a51e6dde44430c1b740e 202 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS11930 1ddfff2fa414dcf09644da1a9fb1ef36 397 Pfam PF12704 MacB-like periplasmic core domain 20 207 1.5E-10 T 25-04-2017 IPR025857 MacB-like periplasmic core domain CLFO_RS11930 1ddfff2fa414dcf09644da1a9fb1ef36 397 Pfam PF02687 FtsX-like permease family 276 390 1.6E-20 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS13945 e45be5c9e1b12aa8402c4f1e7071ae3b 262 Gene3D G3DSA:1.10.3720.10 3 253 5.8E-45 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS13945 e45be5c9e1b12aa8402c4f1e7071ae3b 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 253 1.8E-15 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS13945 e45be5c9e1b12aa8402c4f1e7071ae3b 262 SUPERFAMILY SSF161098 4 256 7.38E-50 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS16750 8bf566e807a5ea47a4505562595d68bb 170 Pfam PF11553 Protein of unknown function (DUF3231) 2 167 2.1E-38 T 25-04-2017 IPR021617 Protein of unknown function DUF3231 CLFO_RS16750 8bf566e807a5ea47a4505562595d68bb 170 Gene3D G3DSA:1.20.1260.10 1 157 2.4E-64 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS06895 75aec06b7f67bd279d6237f919e8b11c 263 SMART SM00382 29 221 8.0E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS06895 75aec06b7f67bd279d6237f919e8b11c 263 Pfam PF00005 ABC transporter 20 170 1.5E-29 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS06895 75aec06b7f67bd279d6237f919e8b11c 263 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS06895 75aec06b7f67bd279d6237f919e8b11c 263 Gene3D G3DSA:3.40.50.300 4 236 3.6E-50 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06895 75aec06b7f67bd279d6237f919e8b11c 263 SUPERFAMILY SSF52540 2 236 1.21E-49 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12385 1ffa603a00b54b4e96218c665a415a32 167 SUPERFAMILY SSF46934 1 52 2.86E-10 T 25-04-2017 IPR009060 UBA-like GO:0005515 CLFO_RS12385 1ffa603a00b54b4e96218c665a415a32 167 Gene3D G3DSA:1.10.8.10 3 41 2.6E-11 T 25-04-2017 CLFO_RS12385 1ffa603a00b54b4e96218c665a415a32 167 Pfam PF14242 Domain of unknown function (DUF4342) 46 120 2.9E-25 T 25-04-2017 IPR025642 Domain of unknown function DUF4342 CLFO_RS18520 162c7814be8d55b837857ab69a905194 340 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 7 340 35.272 T 25-04-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLFO_RS18520 162c7814be8d55b837857ab69a905194 340 Gene3D G3DSA:3.40.50.2300 3 109 8.0E-26 T 25-04-2017 CLFO_RS18520 162c7814be8d55b837857ab69a905194 340 PIRSF PIRSF000876 4 340 3.2E-116 T 25-04-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLFO_RS18520 162c7814be8d55b837857ab69a905194 340 Pfam PF01339 CheB methylesterase 157 335 1.7E-54 T 25-04-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLFO_RS18520 162c7814be8d55b837857ab69a905194 340 SUPERFAMILY SSF52172 6 107 2.13E-25 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS18520 162c7814be8d55b837857ab69a905194 340 Gene3D G3DSA:3.40.50.180 153 339 2.2E-70 T 25-04-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLFO_RS18520 162c7814be8d55b837857ab69a905194 340 Pfam PF00072 Response regulator receiver domain 9 107 1.3E-20 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS18520 162c7814be8d55b837857ab69a905194 340 SUPERFAMILY SSF52738 154 339 3.92E-62 T 25-04-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CLFO_RS18520 162c7814be8d55b837857ab69a905194 340 SMART SM00448 7 126 1.7E-21 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS09715 226d4c5e4f49ece745dc7f2d727f01ab 75 Gene3D G3DSA:1.10.287.1040 3 72 1.5E-24 T 25-04-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLFO_RS09715 226d4c5e4f49ece745dc7f2d727f01ab 75 SUPERFAMILY SSF116842 3 68 4.18E-21 T 25-04-2017 CLFO_RS09715 226d4c5e4f49ece745dc7f2d727f01ab 75 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 5 65 14.788 T 25-04-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLFO_RS09715 226d4c5e4f49ece745dc7f2d727f01ab 75 Pfam PF02609 Exonuclease VII small subunit 6 56 3.5E-20 T 25-04-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLFO_RS09715 226d4c5e4f49ece745dc7f2d727f01ab 75 PIRSF PIRSF006488 1 74 3.8E-21 T 25-04-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLFO_RS09715 226d4c5e4f49ece745dc7f2d727f01ab 75 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 5 61 4.5E-21 T 25-04-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CLFO_RS06535 b71a43451b0901cc805e1f5eefb78658 293 Gene3D G3DSA:3.40.50.620 3 239 1.7E-53 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS06535 b71a43451b0901cc805e1f5eefb78658 293 SUPERFAMILY SSF52402 2 226 2.96E-55 T 25-04-2017 CLFO_RS06535 b71a43451b0901cc805e1f5eefb78658 293 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 27 245 5.7E-40 T 25-04-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CLFO_RS06320 e82ed818c80e0c18fa73183d0c518849 466 Pfam PF00860 Permease family 30 406 3.2E-93 T 25-04-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLFO_RS06320 e82ed818c80e0c18fa73183d0c518849 466 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 355 375 - T 25-04-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CLFO_RS06320 e82ed818c80e0c18fa73183d0c518849 466 TIGRFAM TIGR03173 pbuX: xanthine permease 34 440 6.2E-143 T 25-04-2017 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CLFO_RS06320 e82ed818c80e0c18fa73183d0c518849 466 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 26 438 1.4E-115 T 25-04-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CLFO_RS01360 918a0fb0049450aeca8f945ee921670d 443 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 442 1.3E-77 T 25-04-2017 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 CLFO_RS01360 918a0fb0049450aeca8f945ee921670d 443 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 2.5E-25 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS01360 918a0fb0049450aeca8f945ee921670d 443 Gene3D G3DSA:1.20.1330.10 53 163 2.2E-34 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS01360 918a0fb0049450aeca8f945ee921670d 443 Gene3D G3DSA:1.20.1330.10 347 398 2.2E-34 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS01360 918a0fb0049450aeca8f945ee921670d 443 Pfam PF00700 Bacterial flagellin C-terminal helical region 360 442 5.4E-8 T 25-04-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CLFO_RS01360 918a0fb0049450aeca8f945ee921670d 443 SUPERFAMILY SSF64518 312 443 7.06E-68 T 25-04-2017 CLFO_RS01360 918a0fb0049450aeca8f945ee921670d 443 SUPERFAMILY SSF64518 1 193 7.06E-68 T 25-04-2017 CLFO_RS14230 a02c5bc098c63318f203d389b79dbfab 342 Gene3D G3DSA:1.20.1510.10 34 246 4.0E-12 T 25-04-2017 IPR027469 Cation efflux protein transmembrane domain CLFO_RS14230 a02c5bc098c63318f203d389b79dbfab 342 SUPERFAMILY SSF161111 30 248 4.18E-18 T 25-04-2017 CLFO_RS14230 a02c5bc098c63318f203d389b79dbfab 342 Pfam PF01545 Cation efflux family 37 246 9.1E-24 T 25-04-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CLFO_RS02875 d68812d5c224f48c87428da966b47fd3 272 SUPERFAMILY SSF55469 4 142 1.83E-22 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS02875 d68812d5c224f48c87428da966b47fd3 272 Gene3D G3DSA:3.40.109.30 180 250 5.7E-12 T 25-04-2017 CLFO_RS02875 d68812d5c224f48c87428da966b47fd3 272 SUPERFAMILY SSF55469 181 268 1.44E-8 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS02875 d68812d5c224f48c87428da966b47fd3 272 Pfam PF14512 Putative TM nitroreductase 6 237 1.4E-29 T 25-04-2017 IPR029478 Putative nitroreductase TM1586 CLFO_RS02875 d68812d5c224f48c87428da966b47fd3 272 Gene3D G3DSA:3.40.109.10 1 171 4.7E-25 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS08105 430bedd7b4db278121e084a962bdf101 73 SUPERFAMILY SSF56349 8 67 1.82E-9 T 25-04-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLFO_RS08105 430bedd7b4db278121e084a962bdf101 73 Gene3D G3DSA:1.10.443.10 15 69 1.8E-8 T 25-04-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS16480 8c73bd66cb15a046d34495a71cc6a9b1 523 PIRSF PIRSF002741 1 523 6.3E-72 T 25-04-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLFO_RS16480 8c73bd66cb15a046d34495a71cc6a9b1 523 SUPERFAMILY SSF53850 31 515 5.29E-96 T 25-04-2017 CLFO_RS16480 8c73bd66cb15a046d34495a71cc6a9b1 523 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 437 4.5E-72 T 25-04-2017 IPR000914 Solute-binding protein family 5 domain CLFO_RS16480 8c73bd66cb15a046d34495a71cc6a9b1 523 Gene3D G3DSA:3.10.105.10 296 493 2.4E-39 T 25-04-2017 CLFO_RS16480 8c73bd66cb15a046d34495a71cc6a9b1 523 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 27 520 1.0E-156 T 25-04-2017 IPR011980 Periplasmic nickel-binding protein GO:0015675|GO:0016151|GO:0020037 CLFO_RS16480 8c73bd66cb15a046d34495a71cc6a9b1 523 Gene3D G3DSA:3.40.190.10 189 295 2.1E-21 T 25-04-2017 CLFO_RS16480 8c73bd66cb15a046d34495a71cc6a9b1 523 Gene3D G3DSA:3.90.76.10 43 188 4.1E-30 T 25-04-2017 CLFO_RS11830 8de6b681acd98d2ffd97d4022055d533 270 Pfam PF01578 Cytochrome C assembly protein 64 267 1.7E-57 T 25-04-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CLFO_RS11830 8de6b681acd98d2ffd97d4022055d533 270 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 42 270 2.3E-83 T 25-04-2017 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 CLFO_RS19795 f09fcc15f5062e56d86c47b63691ac3a 169 Pfam PF05991 YacP-like NYN domain 5 167 1.7E-52 T 25-04-2017 IPR010298 Protein of unknown function DUF901 CLFO_RS01825 5f9ffb349084a607ad4f0071288b5515 311 Pfam PF13240 zinc-ribbon domain 3 24 1.1E-6 T 25-04-2017 IPR026870 Zinc-ribbon domain CLFO_RS11150 3fc6a95dd44fcdae84f7366264d13b42 147 Pfam PF00460 Flagella basal body rod protein 7 34 9.1E-7 T 25-04-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLFO_RS11150 3fc6a95dd44fcdae84f7366264d13b42 147 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 147 2.0E-51 T 25-04-2017 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CLFO_RS11150 3fc6a95dd44fcdae84f7366264d13b42 147 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 95 144 3.3E-12 T 25-04-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLFO_RS20975 6e97bbc5a08ca8639ec012bf96dfb041 417 Gene3D G3DSA:3.65.10.10 221 414 1.7E-63 T 25-04-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CLFO_RS20975 6e97bbc5a08ca8639ec012bf96dfb041 417 Gene3D G3DSA:3.65.10.10 22 220 4.5E-62 T 25-04-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CLFO_RS20975 6e97bbc5a08ca8639ec012bf96dfb041 417 SUPERFAMILY SSF55205 1 414 2.29E-133 T 25-04-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CLFO_RS20975 6e97bbc5a08ca8639ec012bf96dfb041 417 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 405 8.4E-97 T 25-04-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 CLFO_RS20975 6e97bbc5a08ca8639ec012bf96dfb041 417 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 414 1.5E-169 T 25-04-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS20975 6e97bbc5a08ca8639ec012bf96dfb041 417 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 43.84 T 25-04-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CLFO_RS03760 6f457a6883277e825cab52fd0b29fa68 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 151 1.9E-28 T 25-04-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CLFO_RS12935 099d9382b6de8e921d89209df17219c1 166 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 152 6.9E-26 T 25-04-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CLFO_RS00760 e1bb5c969af8768caa08f5aa9bd282d5 37 Pfam PF00395 S-layer homology domain 2 37 5.2E-13 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS10820 7bb43c90ae2349d8917e7c56bde21a1a 349 Gene3D G3DSA:3.40.50.300 143 343 4.3E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10820 7bb43c90ae2349d8917e7c56bde21a1a 349 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 15 319 5.5E-93 T 25-04-2017 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CLFO_RS10820 7bb43c90ae2349d8917e7c56bde21a1a 349 SUPERFAMILY SSF52540 234 344 1.77E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10820 7bb43c90ae2349d8917e7c56bde21a1a 349 SUPERFAMILY SSF52540 141 207 1.77E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10820 7bb43c90ae2349d8917e7c56bde21a1a 349 SMART SM00450 2 131 6.8E-15 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS10820 7bb43c90ae2349d8917e7c56bde21a1a 349 Pfam PF00581 Rhodanese-like domain 8 126 9.7E-9 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS10820 7bb43c90ae2349d8917e7c56bde21a1a 349 SUPERFAMILY SSF52821 90 153 3.01E-22 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS10820 7bb43c90ae2349d8917e7c56bde21a1a 349 SUPERFAMILY SSF52821 13 63 3.01E-22 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS10820 7bb43c90ae2349d8917e7c56bde21a1a 349 Gene3D G3DSA:3.40.250.10 4 130 1.2E-30 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS00350 2aab75c92b49e528bc0ec80bcd664972 243 Gene3D G3DSA:3.30.950.10 116 229 6.3E-12 T 25-04-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00350 2aab75c92b49e528bc0ec80bcd664972 243 SUPERFAMILY SSF53790 1 241 1.09E-59 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00350 2aab75c92b49e528bc0ec80bcd664972 243 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 210 2.0E-41 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00350 2aab75c92b49e528bc0ec80bcd664972 243 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 5 241 1.1E-101 T 25-04-2017 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 CLFO_RS00350 2aab75c92b49e528bc0ec80bcd664972 243 Gene3D G3DSA:3.40.1010.10 1 115 6.9E-35 T 25-04-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS10870 687de9694f1e04476c0c5a2c3244b454 323 Pfam PF01368 DHH family 17 159 4.5E-17 T 25-04-2017 IPR001667 DDH domain CLFO_RS10870 687de9694f1e04476c0c5a2c3244b454 323 Gene3D G3DSA:3.90.1640.10 16 198 2.7E-33 T 25-04-2017 CLFO_RS10870 687de9694f1e04476c0c5a2c3244b454 323 Pfam PF02272 DHHA1 domain 258 315 6.0E-7 T 25-04-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CLFO_RS10870 687de9694f1e04476c0c5a2c3244b454 323 SUPERFAMILY SSF64182 16 315 2.22E-65 T 25-04-2017 CLFO_RS14130 221452fda141ce66db053d134e510aeb 300 PIRSF PIRSF001365 2 300 2.8E-80 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14130 221452fda141ce66db053d134e510aeb 300 Pfam PF00701 Dihydrodipicolinate synthetase family 5 292 2.1E-71 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14130 221452fda141ce66db053d134e510aeb 300 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 292 3.9E-65 T 25-04-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CLFO_RS14130 221452fda141ce66db053d134e510aeb 300 SMART SM01130 4 296 7.9E-98 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14130 221452fda141ce66db053d134e510aeb 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 2.1E-21 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14130 221452fda141ce66db053d134e510aeb 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 2.1E-21 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14130 221452fda141ce66db053d134e510aeb 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 2.1E-21 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14130 221452fda141ce66db053d134e510aeb 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 2.1E-21 T 25-04-2017 IPR002220 DapA-like GO:0008152|GO:0016829 CLFO_RS14130 221452fda141ce66db053d134e510aeb 300 Gene3D G3DSA:3.20.20.70 4 296 2.2E-92 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS14130 221452fda141ce66db053d134e510aeb 300 SUPERFAMILY SSF51569 4 296 6.8E-83 T 25-04-2017 CLFO_RS05100 6478a42d51cdd1d565351f44c641bd8a 456 SUPERFAMILY SSF56322 13 454 4.58E-149 T 25-04-2017 IPR005801 ADC synthase GO:0009058 CLFO_RS05100 6478a42d51cdd1d565351f44c641bd8a 456 Pfam PF00425 chorismate binding enzyme 193 446 3.0E-99 T 25-04-2017 IPR015890 Chorismate-utilising enzyme, C-terminal CLFO_RS05100 6478a42d51cdd1d565351f44c641bd8a 456 Gene3D G3DSA:3.60.120.10 4 454 2.7E-160 T 25-04-2017 IPR005801 ADC synthase GO:0009058 CLFO_RS05100 6478a42d51cdd1d565351f44c641bd8a 456 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 99 449 2.0E-117 T 25-04-2017 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CLFO_RS05100 6478a42d51cdd1d565351f44c641bd8a 456 Pfam PF04715 Anthranilate synthase component I, N terminal region 11 146 1.1E-38 T 25-04-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS05100 6478a42d51cdd1d565351f44c641bd8a 456 PRINTS PR00095 Anthranilate synthase component I signature 294 307 2.5E-17 T 25-04-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS05100 6478a42d51cdd1d565351f44c641bd8a 456 PRINTS PR00095 Anthranilate synthase component I signature 308 321 2.5E-17 T 25-04-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS05100 6478a42d51cdd1d565351f44c641bd8a 456 PRINTS PR00095 Anthranilate synthase component I signature 388 402 2.5E-17 T 25-04-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS05100 6478a42d51cdd1d565351f44c641bd8a 456 PRINTS PR00095 Anthranilate synthase component I signature 403 417 2.5E-17 T 25-04-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CLFO_RS05675 ef0f79c09f021bc7907a61dbf2a866b9 109 ProDom PD053081 COIL MM0410 AF2262 COILED 54 106 1.0E-17 T 25-04-2017 CLFO_RS09880 ed5ecb5600f1921b53397753add550bd 154 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 131 5.2E-30 T 25-04-2017 IPR014229 Sporulation protein YtfJ CLFO_RS09880 ed5ecb5600f1921b53397753add550bd 154 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 141 8.4E-54 T 25-04-2017 IPR014229 Sporulation protein YtfJ CLFO_RS09880 ed5ecb5600f1921b53397753add550bd 154 PIRSF PIRSF021377 1 152 2.8E-49 T 25-04-2017 IPR014229 Sporulation protein YtfJ CLFO_RS12230 b75ac126a63302e8a5bdc0c8adeba91b 132 SUPERFAMILY SSF53098 2 126 1.52E-32 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS12230 b75ac126a63302e8a5bdc0c8adeba91b 132 Pfam PF13456 Reverse transcriptase-like 8 128 1.9E-26 T 25-04-2017 CLFO_RS12230 b75ac126a63302e8a5bdc0c8adeba91b 132 Gene3D G3DSA:3.30.420.10 2 131 7.0E-25 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS00725 65acb2ef99cbb399e51b4b08ed4a183d 329 Gene3D G3DSA:3.90.550.10 4 237 4.1E-56 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00725 65acb2ef99cbb399e51b4b08ed4a183d 329 SUPERFAMILY SSF53448 2 275 5.2E-61 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00725 65acb2ef99cbb399e51b4b08ed4a183d 329 Pfam PF00535 Glycosyl transferase family 2 6 176 4.9E-33 T 25-04-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLFO_RS08900 6cc559c7d259ef46b554b8229e571e8d 213 Pfam PF08955 BofC C-terminal domain 144 212 2.7E-5 T 25-04-2017 IPR015050 Bypass of forespore C, C-terminal CLFO_RS10780 36c7cd7a32ae864458137f9475762300 676 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 88 231 2.8E-26 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS10780 36c7cd7a32ae864458137f9475762300 676 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 352 417 1.9E-8 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS10780 36c7cd7a32ae864458137f9475762300 676 Pfam PF01348 Type II intron maturase 444 543 8.9E-13 T 25-04-2017 IPR024937 Domain X GO:0006397 CLFO_RS10780 36c7cd7a32ae864458137f9475762300 676 SUPERFAMILY SSF56672 51 237 1.02E-42 T 25-04-2017 CLFO_RS10780 36c7cd7a32ae864458137f9475762300 676 SUPERFAMILY SSF56672 355 421 1.02E-42 T 25-04-2017 CLFO_RS14475 5bcdc6a66a2b99e6ce738e6b8807d202 125 SMART SM00345 17 76 1.7E-13 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS14475 5bcdc6a66a2b99e6ce738e6b8807d202 125 Gene3D G3DSA:1.10.10.10 4 77 1.6E-27 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS14475 5bcdc6a66a2b99e6ce738e6b8807d202 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.6E-14 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS14475 5bcdc6a66a2b99e6ce738e6b8807d202 125 SUPERFAMILY SSF46785 6 80 1.76E-21 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS17455 97c92595300e9407527ff088ef7f229f 73 SUPERFAMILY SSF56672 2 66 3.81E-8 T 25-04-2017 CLFO_RS17455 97c92595300e9407527ff088ef7f229f 73 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 2 61 2.9E-10 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS01190 ff9e2ce557394310bdb9219cdafbe7fc 305 SUPERFAMILY SSF53448 1 275 3.34E-70 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS01190 ff9e2ce557394310bdb9219cdafbe7fc 305 Gene3D G3DSA:3.90.550.10 4 274 6.7E-77 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS01190 ff9e2ce557394310bdb9219cdafbe7fc 305 Pfam PF00483 Nucleotidyl transferase 5 266 2.7E-34 T 25-04-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLFO_RS01190 ff9e2ce557394310bdb9219cdafbe7fc 305 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 264 4.9E-124 T 25-04-2017 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CLFO_RS00715 9d3bbc955f316868c089b10e61114ecf 1141 SUPERFAMILY SSF53335 18 190 1.43E-35 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS00715 9d3bbc955f316868c089b10e61114ecf 1141 SUPERFAMILY SSF53448 885 1133 4.33E-56 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00715 9d3bbc955f316868c089b10e61114ecf 1141 SUPERFAMILY SSF53756 540 881 5.23E-21 T 25-04-2017 CLFO_RS00715 9d3bbc955f316868c089b10e61114ecf 1141 Pfam PF13489 Methyltransferase domain 27 177 3.9E-22 T 25-04-2017 CLFO_RS00715 9d3bbc955f316868c089b10e61114ecf 1141 Gene3D G3DSA:3.90.550.10 887 1129 1.4E-54 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00715 9d3bbc955f316868c089b10e61114ecf 1141 Pfam PF13692 Glycosyl transferases group 1 737 850 5.0E-11 T 25-04-2017 CLFO_RS00715 9d3bbc955f316868c089b10e61114ecf 1141 Pfam PF00535 Glycosyl transferase family 2 888 1060 7.7E-37 T 25-04-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLFO_RS00715 9d3bbc955f316868c089b10e61114ecf 1141 Gene3D G3DSA:3.40.50.150 28 220 3.6E-39 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS03795 a1411cbf7887c41e141323f011aff8b4 302 SUPERFAMILY SSF161098 26 302 2.99E-68 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS03795 a1411cbf7887c41e141323f011aff8b4 302 Gene3D G3DSA:1.10.3720.10 21 289 2.5E-60 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS03795 a1411cbf7887c41e141323f011aff8b4 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 294 8.1E-17 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS01165 fe88ad296c146cbf5857014e4f8c390f 427 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 330 411 4.7E-13 T 25-04-2017 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLFO_RS01165 fe88ad296c146cbf5857014e4f8c390f 427 Pfam PF01943 Polysaccharide biosynthesis protein 11 266 4.6E-15 T 25-04-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CLFO_RS03525 feb81afb09ae5ce649900dd66b6d1df1 197 Gene3D G3DSA:3.30.160.20 90 162 2.4E-21 T 25-04-2017 IPR014720 Double-stranded RNA-binding domain CLFO_RS03525 feb81afb09ae5ce649900dd66b6d1df1 197 Pfam PF00472 RF-1 domain 91 168 1.1E-20 T 25-04-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CLFO_RS03525 feb81afb09ae5ce649900dd66b6d1df1 197 SUPERFAMILY SSF75620 2 189 9.42E-37 T 25-04-2017 CLFO_RS03525 feb81afb09ae5ce649900dd66b6d1df1 197 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 1 191 1.9E-55 T 25-04-2017 IPR017509 Putative peptide chain release factor H CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 3.5E-14 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.5E-14 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.5E-14 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 25-04-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.7E-45 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.7E-45 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.7E-45 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.7E-45 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.7E-45 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.7E-45 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 253 1.2E-63 T 25-04-2017 CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 Gene3D G3DSA:3.40.50.720 7 255 9.7E-87 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03810 85ea9c6d1d9f1774065267cba2995dab 256 SUPERFAMILY SSF51735 8 255 3.54E-81 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS05075 2c1b2a752f4d7e1af83e189da7e68696 405 SUPERFAMILY SSF103642 384 404 1.46E-7 T 25-04-2017 CLFO_RS05075 2c1b2a752f4d7e1af83e189da7e68696 405 Gene3D G3DSA:3.10.450.50 356 405 7.9E-14 T 25-04-2017 IPR032710 NTF2-like domain CLFO_RS05075 2c1b2a752f4d7e1af83e189da7e68696 405 Pfam PF02810 SEC-C motif 387 405 2.2E-10 T 25-04-2017 IPR004027 SEC-C motif CLFO_RS18080 638c3e541dc2ff339a4d2067c0e71e3a 187 Pfam PF02417 Chromate transporter 5 183 1.7E-45 T 25-04-2017 IPR003370 Chromate transporter GO:0015109|GO:0015703 CLFO_RS20105 587c90b6f2d6f8ef1f3c1f4b264224ed 370 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 363 4.3E-70 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS20105 587c90b6f2d6f8ef1f3c1f4b264224ed 370 Pfam PF03845 Spore germination protein 7 325 1.6E-61 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS12430 3b5dc48a05b9142ba2367f221ba88b47 316 Gene3D G3DSA:3.40.50.300 102 306 2.1E-87 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12430 3b5dc48a05b9142ba2367f221ba88b47 316 SUPERFAMILY SSF52540 103 284 1.71E-41 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12430 3b5dc48a05b9142ba2367f221ba88b47 316 SUPERFAMILY SSF52540 15 76 1.71E-41 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12430 3b5dc48a05b9142ba2367f221ba88b47 316 Pfam PF02562 PhoH-like protein 104 307 4.5E-96 T 25-04-2017 IPR003714 PhoH-like protein GO:0005524 CLFO_RS13155 801ac6512caec0165037b00c54b4ece7 345 Pfam PF03601 Conserved hypothetical protein 698 10 322 6.7E-79 T 25-04-2017 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CLFO_RS16760 c0952c2ace44530086f9263b931786a6 56 Gene3D G3DSA:3.40.109.10 5 47 4.0E-5 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS08235 a5f853e19884565bc1eeff7cba909109 61 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 4 54 8.5E-13 T 25-04-2017 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLFO_RS08235 a5f853e19884565bc1eeff7cba909109 61 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 19 28 - T 25-04-2017 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLFO_RS14980 f3c8ad0d25546e4b726a67d28061c1ca 374 SUPERFAMILY SSF53850 39 304 4.1E-25 T 25-04-2017 CLFO_RS14980 f3c8ad0d25546e4b726a67d28061c1ca 374 Gene3D G3DSA:3.40.190.10 140 286 1.5E-9 T 25-04-2017 CLFO_RS14980 f3c8ad0d25546e4b726a67d28061c1ca 374 Pfam PF13379 NMT1-like family 37 305 8.1E-40 T 25-04-2017 CLFO_RS20595 e8b41a0fd3a19ec98781c2adbbfa0f89 67 Gene3D G3DSA:3.30.70.20 5 65 1.7E-13 T 25-04-2017 CLFO_RS20595 e8b41a0fd3a19ec98781c2adbbfa0f89 67 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 48 59 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS20595 e8b41a0fd3a19ec98781c2adbbfa0f89 67 Pfam PF12838 4Fe-4S dicluster domain 11 59 3.1E-9 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS20595 e8b41a0fd3a19ec98781c2adbbfa0f89 67 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 11 22 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS20595 e8b41a0fd3a19ec98781c2adbbfa0f89 67 SUPERFAMILY SSF54862 3 64 1.2E-13 T 25-04-2017 CLFO_RS04810 77bbbe0468bd11558c0af042c3c6e849 155 Gene3D G3DSA:3.40.47.10 1 97 1.7E-29 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04810 77bbbe0468bd11558c0af042c3c6e849 155 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 42 151 5.8E-15 T 25-04-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CLFO_RS04810 77bbbe0468bd11558c0af042c3c6e849 155 SUPERFAMILY SSF53901 1 95 1.55E-24 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04810 77bbbe0468bd11558c0af042c3c6e849 155 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1 38 1.5E-11 T 25-04-2017 IPR014031 Beta-ketoacyl synthase, C-terminal CLFO_RS18210 8b53319ce6f490e0b9ace8057eb65f5c 215 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 8 73 9.0E-9 T 25-04-2017 IPR020137 Uncharacterised protein family HI1736 CLFO_RS18210 8b53319ce6f490e0b9ace8057eb65f5c 215 Pfam PF10688 Bacterial inner membrane protein 4 75 8.5E-6 T 25-04-2017 IPR019629 Uncharacterised protein family HI1736/YgjV CLFO_RS18210 8b53319ce6f490e0b9ace8057eb65f5c 215 Gene3D G3DSA:3.40.630.30 117 200 3.9E-5 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS18210 8b53319ce6f490e0b9ace8057eb65f5c 215 SUPERFAMILY SSF55729 88 201 5.51E-9 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 SUPERFAMILY SSF51735 5 230 2.53E-64 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 230 7.1E-55 T 25-04-2017 CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 7.3E-12 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 7.3E-12 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 7.3E-12 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 1.2E-34 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 1.2E-34 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.2E-34 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 1.2E-34 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 1.2E-34 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 1.2E-34 T 25-04-2017 IPR002347 Short-chain dehydrogenase/reductase SDR CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 Gene3D G3DSA:3.40.50.720 5 231 4.0E-64 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16110 b68bf6f9be841ac8e14d7b2a6cf8b621 236 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 25-04-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CLFO_RS11445 0177a697b62e6ee287d5b448c42990d9 284 SUPERFAMILY SSF54506 145 276 1.84E-39 T 25-04-2017 CLFO_RS11445 0177a697b62e6ee287d5b448c42990d9 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 280 36.138 T 25-04-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CLFO_RS11445 0177a697b62e6ee287d5b448c42990d9 284 SUPERFAMILY SSF54506 3 135 4.49E-40 T 25-04-2017 CLFO_RS11445 0177a697b62e6ee287d5b448c42990d9 284 Gene3D G3DSA:3.10.310.10 2 123 4.9E-50 T 25-04-2017 CLFO_RS11445 0177a697b62e6ee287d5b448c42990d9 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 65 79 - T 25-04-2017 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CLFO_RS11445 0177a697b62e6ee287d5b448c42990d9 284 Gene3D G3DSA:3.10.310.10 124 268 3.0E-43 T 25-04-2017 CLFO_RS11445 0177a697b62e6ee287d5b448c42990d9 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 278 5.8E-83 T 25-04-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CLFO_RS11445 0177a697b62e6ee287d5b448c42990d9 284 Pfam PF01678 Diaminopimelate epimerase 5 128 8.9E-31 T 25-04-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CLFO_RS11445 0177a697b62e6ee287d5b448c42990d9 284 Pfam PF01678 Diaminopimelate epimerase 159 270 1.6E-24 T 25-04-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CLFO_RS09075 463b819ca7637b7f36377fb63482e6c7 121 Pfam PF16552 D-ornithine 4,5-aminomutase alpha-subunit 2 116 6.6E-57 T 25-04-2017 IPR015130 D-Lysine 5,6-aminomutase alpha subunit CLFO_RS09075 463b819ca7637b7f36377fb63482e6c7 121 SUPERFAMILY SSF51703 13 116 8.63E-17 T 25-04-2017 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CLFO_RS09075 463b819ca7637b7f36377fb63482e6c7 121 Gene3D G3DSA:3.20.20.440 24 104 1.7E-6 T 25-04-2017 IPR015130 D-Lysine 5,6-aminomutase alpha subunit CLFO_RS11990 188a45fb7299f1f58c7470c1bfa8a4e2 163 Pfam PF01930 Domain of unknown function DUF83 5 163 2.1E-57 T 25-04-2017 IPR022765 Dna2/Cas4, domain of unknown function DUF83 CLFO_RS11990 188a45fb7299f1f58c7470c1bfa8a4e2 163 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 5 162 1.1E-23 T 25-04-2017 IPR013343 CRISPR-associated protein Cas4 CLFO_RS03550 f2b2dd6b73db67ca4984def920b94d9e 287 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 80 229 1.0E-23 T 25-04-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLFO_RS03550 f2b2dd6b73db67ca4984def920b94d9e 287 SUPERFAMILY SSF52518 40 276 3.27E-49 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS03550 f2b2dd6b73db67ca4984def920b94d9e 287 Gene3D G3DSA:3.40.50.970 40 263 4.4E-52 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS16695 905f847b60cf845b13ec3a33037e2a98 334 Gene3D G3DSA:3.30.1180.20 185 330 5.7E-51 T 25-04-2017 CLFO_RS16695 905f847b60cf845b13ec3a33037e2a98 334 Pfam PF02733 Dak1 domain 17 326 1.4E-112 T 25-04-2017 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CLFO_RS16695 905f847b60cf845b13ec3a33037e2a98 334 SUPERFAMILY SSF82549 11 330 1.07E-112 T 25-04-2017 CLFO_RS16695 905f847b60cf845b13ec3a33037e2a98 334 Gene3D G3DSA:3.40.50.10440 11 184 1.9E-61 T 25-04-2017 CLFO_RS12060 9537b50cc94d2a72326458bb9fbe143c 350 Gene3D G3DSA:3.40.190.10 121 242 8.8E-16 T 25-04-2017 CLFO_RS12060 9537b50cc94d2a72326458bb9fbe143c 350 SUPERFAMILY SSF53850 33 258 1.54E-38 T 25-04-2017 CLFO_RS12060 9537b50cc94d2a72326458bb9fbe143c 350 Pfam PF09084 NMT1/THI5 like 50 252 5.0E-27 T 25-04-2017 IPR015168 SsuA/THI5-like CLFO_RS17415 3a9538eb1a0e73ad128f702ff030d71c 434 Pfam PF10646 Sporulation and spore germination 171 277 1.2E-10 T 25-04-2017 IPR019606 GerMN domain CLFO_RS17415 3a9538eb1a0e73ad128f702ff030d71c 434 Pfam PF10646 Sporulation and spore germination 321 406 9.8E-10 T 25-04-2017 IPR019606 GerMN domain CLFO_RS17415 3a9538eb1a0e73ad128f702ff030d71c 434 SMART SM00909 196 283 1.0E-5 T 25-04-2017 IPR019606 GerMN domain CLFO_RS17415 3a9538eb1a0e73ad128f702ff030d71c 434 SMART SM00909 325 412 5.9E-6 T 25-04-2017 IPR019606 GerMN domain CLFO_RS21420 4f7bcb32c1e81c2e7422ed8404a15aea 206 Gene3D G3DSA:3.30.1370.50 137 205 4.9E-29 T 25-04-2017 IPR001374 R3H domain GO:0003676 CLFO_RS21420 4f7bcb32c1e81c2e7422ed8404a15aea 206 Pfam PF13083 KH domain 62 128 1.3E-19 T 25-04-2017 CLFO_RS21420 4f7bcb32c1e81c2e7422ed8404a15aea 206 Gene3D G3DSA:3.30.30.80 1 56 3.5E-21 T 25-04-2017 IPR032782 Jag, N-terminal CLFO_RS21420 4f7bcb32c1e81c2e7422ed8404a15aea 206 SUPERFAMILY SSF82708 148 203 1.88E-7 T 25-04-2017 IPR001374 R3H domain GO:0003676 CLFO_RS21420 4f7bcb32c1e81c2e7422ed8404a15aea 206 Gene3D G3DSA:3.30.300.120 60 136 8.9E-24 T 25-04-2017 CLFO_RS21420 4f7bcb32c1e81c2e7422ed8404a15aea 206 SMART SM01245 5 57 2.9E-23 T 25-04-2017 IPR032782 Jag, N-terminal CLFO_RS21420 4f7bcb32c1e81c2e7422ed8404a15aea 206 Pfam PF01424 R3H domain 144 203 2.4E-16 T 25-04-2017 IPR001374 R3H domain GO:0003676 CLFO_RS21420 4f7bcb32c1e81c2e7422ed8404a15aea 206 Pfam PF14804 Jag N-terminus 7 56 1.6E-20 T 25-04-2017 IPR032782 Jag, N-terminal CLFO_RS21420 4f7bcb32c1e81c2e7422ed8404a15aea 206 SMART SM00393 126 205 4.8E-21 T 25-04-2017 IPR001374 R3H domain GO:0003676 CLFO_RS09200 2ea9a86b84d9fae4227717bb7d3fb393 229 Gene3D G3DSA:3.40.50.150 3 54 3.0E-4 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS09200 2ea9a86b84d9fae4227717bb7d3fb393 229 Pfam PF13578 Methyltransferase domain 22 123 3.4E-8 T 25-04-2017 CLFO_RS09200 2ea9a86b84d9fae4227717bb7d3fb393 229 SUPERFAMILY SSF53335 9 127 9.51E-9 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS05850 8656d1113732ee621df5731077847f4f 588 Gene3D G3DSA:3.80.30.20 176 368 5.9E-35 T 25-04-2017 IPR023404 Radical SAM, alpha/beta horseshoe CLFO_RS05850 8656d1113732ee621df5731077847f4f 588 SUPERFAMILY SSF52242 36 139 1.96E-8 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS05850 8656d1113732ee621df5731077847f4f 588 Pfam PF13311 Protein of unknown function (DUF4080) 370 557 2.1E-56 T 25-04-2017 IPR025288 Domain of unknown function DUF4080 CLFO_RS05850 8656d1113732ee621df5731077847f4f 588 SMART SM00729 175 387 1.8E-25 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS05850 8656d1113732ee621df5731077847f4f 588 Pfam PF02310 B12 binding domain 7 123 3.9E-20 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS05850 8656d1113732ee621df5731077847f4f 588 SUPERFAMILY SSF102114 170 377 2.75E-43 T 25-04-2017 CLFO_RS05850 8656d1113732ee621df5731077847f4f 588 Pfam PF04055 Radical SAM superfamily 180 339 1.7E-14 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS09775 93b7436c8d235c789b0a0d4e2803316d 191 Pfam PF00929 Exonuclease 5 183 3.5E-16 T 25-04-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III CLFO_RS09775 93b7436c8d235c789b0a0d4e2803316d 191 SMART SM00479 2 191 1.4E-14 T 25-04-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III CLFO_RS09775 93b7436c8d235c789b0a0d4e2803316d 191 Gene3D G3DSA:3.30.420.10 1 186 5.6E-43 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS09775 93b7436c8d235c789b0a0d4e2803316d 191 SUPERFAMILY SSF53098 1 189 6.96E-29 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS04590 d8d2a442e048758581f4b2dc26cba4d1 573 Pfam PF00005 ABC transporter 26 180 7.6E-26 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS04590 d8d2a442e048758581f4b2dc26cba4d1 573 Pfam PF00005 ABC transporter 341 488 3.0E-30 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS04590 d8d2a442e048758581f4b2dc26cba4d1 573 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 293 4.5E-13 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS04590 d8d2a442e048758581f4b2dc26cba4d1 573 SUPERFAMILY SSF52540 319 559 1.3E-56 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04590 d8d2a442e048758581f4b2dc26cba4d1 573 SUPERFAMILY SSF52540 7 253 1.77E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04590 d8d2a442e048758581f4b2dc26cba4d1 573 ProSitePatterns PS00211 ABC transporters family signature. 462 476 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS04590 d8d2a442e048758581f4b2dc26cba4d1 573 SMART SM00382 34 238 5.4E-13 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04590 d8d2a442e048758581f4b2dc26cba4d1 573 SMART SM00382 348 539 9.4E-11 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS04590 d8d2a442e048758581f4b2dc26cba4d1 573 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 311 7.2E-15 T 25-04-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CLFO_RS04590 d8d2a442e048758581f4b2dc26cba4d1 573 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS04590 d8d2a442e048758581f4b2dc26cba4d1 573 Gene3D G3DSA:3.40.50.300 6 254 1.7E-72 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04590 d8d2a442e048758581f4b2dc26cba4d1 573 Gene3D G3DSA:3.40.50.300 319 562 4.4E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13005 ea4f3615eab1bfe84d3bf1b9deb970d6 553 SUPERFAMILY SSF52540 3 233 1.08E-57 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13005 ea4f3615eab1bfe84d3bf1b9deb970d6 553 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS13005 ea4f3615eab1bfe84d3bf1b9deb970d6 553 Gene3D G3DSA:3.40.50.300 291 517 2.3E-66 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13005 ea4f3615eab1bfe84d3bf1b9deb970d6 553 SMART SM00382 319 501 8.3E-15 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS13005 ea4f3615eab1bfe84d3bf1b9deb970d6 553 SMART SM00382 30 221 1.8E-12 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS13005 ea4f3615eab1bfe84d3bf1b9deb970d6 553 SUPERFAMILY SSF52540 293 518 8.26E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13005 ea4f3615eab1bfe84d3bf1b9deb970d6 553 Pfam PF00005 ABC transporter 310 452 8.2E-33 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS13005 ea4f3615eab1bfe84d3bf1b9deb970d6 553 Pfam PF00005 ABC transporter 21 172 2.4E-31 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS13005 ea4f3615eab1bfe84d3bf1b9deb970d6 553 Gene3D G3DSA:3.40.50.300 4 239 2.9E-63 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13005 ea4f3615eab1bfe84d3bf1b9deb970d6 553 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS10410 b1a825465d69e0efe8429598a5e3fa11 470 ProDom PD032508 PHAGE-LIKE PBSX XKDK ELEMENT PHAGE LIN1278 SHEATH YQBL RELATED TAIL 350 441 0.003 T 25-04-2017 IPR020287 Tail sheath protein, C-terminal domain CLFO_RS10410 b1a825465d69e0efe8429598a5e3fa11 470 Pfam PF04984 Phage tail sheath protein 11 469 1.7E-111 T 25-04-2017 IPR007067 Tail sheath protein CLFO_RS03245 f5824bb969e918ab80ee663486ea4e1a 99 Gene3D G3DSA:3.30.70.930 1 99 3.1E-37 T 25-04-2017 IPR029756 MTH1187/YkoF-like CLFO_RS03245 f5824bb969e918ab80ee663486ea4e1a 99 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 3 99 9.5E-37 T 25-04-2017 IPR002767 Thiamine-binding protein CLFO_RS03245 f5824bb969e918ab80ee663486ea4e1a 99 Pfam PF01910 Thiamine-binding protein 5 96 1.2E-36 T 25-04-2017 IPR002767 Thiamine-binding protein CLFO_RS03245 f5824bb969e918ab80ee663486ea4e1a 99 SUPERFAMILY SSF89957 1 99 1.31E-34 T 25-04-2017 IPR029756 MTH1187/YkoF-like CLFO_RS10765 454b00746cb77355d9bd6683673dfa5f 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 5.2E-41 T 25-04-2017 IPR007347 Sporulation stage V, protein S CLFO_RS10765 454b00746cb77355d9bd6683673dfa5f 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 1.0E-38 T 25-04-2017 IPR007347 Sporulation stage V, protein S CLFO_RS12090 06677f6faf3a64ed6775084bdb82c234 597 Gene3D G3DSA:3.10.20.30 3 97 5.4E-19 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS12090 06677f6faf3a64ed6775084bdb82c234 597 SUPERFAMILY SSF53067 330 406 2.0E-8 T 25-04-2017 CLFO_RS12090 06677f6faf3a64ed6775084bdb82c234 597 SUPERFAMILY SSF53067 182 212 2.0E-8 T 25-04-2017 CLFO_RS12090 06677f6faf3a64ed6775084bdb82c234 597 SUPERFAMILY SSF53067 241 285 2.0E-8 T 25-04-2017 CLFO_RS12090 06677f6faf3a64ed6775084bdb82c234 597 Pfam PF14574 Domain of unknown function (DUF4445) 182 592 6.8E-148 T 25-04-2017 IPR027980 Protein of unknown function DUF4445 CLFO_RS12090 06677f6faf3a64ed6775084bdb82c234 597 SUPERFAMILY SSF54292 2 93 6.82E-20 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS12090 06677f6faf3a64ed6775084bdb82c234 597 Gene3D G3DSA:3.30.420.40 182 278 1.6E-5 T 25-04-2017 CLFO_RS12090 06677f6faf3a64ed6775084bdb82c234 597 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 82 1.1E-7 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS14250 6409298654b25c69033b620d6b4492e7 312 SUPERFAMILY SSF53271 134 171 2.77E-5 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS14250 6409298654b25c69033b620d6b4492e7 312 Gene3D G3DSA:3.40.50.2020 133 186 4.4E-5 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS00420 0961efa0711563d4fa8943ca2aafd6a8 481 SUPERFAMILY SSF51690 134 474 7.65E-128 T 25-04-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CLFO_RS00420 0961efa0711563d4fa8943ca2aafd6a8 481 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 152 340 4.5E-10 T 25-04-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CLFO_RS00420 0961efa0711563d4fa8943ca2aafd6a8 481 PIRSF PIRSF000484 1 476 6.0E-157 T 25-04-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CLFO_RS00420 0961efa0711563d4fa8943ca2aafd6a8 481 SUPERFAMILY SSF54675 3 133 1.65E-48 T 25-04-2017 CLFO_RS00420 0961efa0711563d4fa8943ca2aafd6a8 481 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 5 462 2.4E-178 T 25-04-2017 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CLFO_RS00420 0961efa0711563d4fa8943ca2aafd6a8 481 Gene3D G3DSA:3.20.140.10 3 382 3.7E-131 T 25-04-2017 CLFO_RS09710 05894c8b9f1b5415449e4e791addbbeb 410 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 3 396 28.412 T 25-04-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CLFO_RS09710 05894c8b9f1b5415449e4e791addbbeb 410 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 7 395 2.1E-151 T 25-04-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CLFO_RS09710 05894c8b9f1b5415449e4e791addbbeb 410 Pfam PF02601 Exonuclease VII, large subunit 336 393 3.2E-9 T 25-04-2017 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CLFO_RS09710 05894c8b9f1b5415449e4e791addbbeb 410 Pfam PF02601 Exonuclease VII, large subunit 125 340 3.8E-81 T 25-04-2017 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CLFO_RS09710 05894c8b9f1b5415449e4e791addbbeb 410 Pfam PF13742 OB-fold nucleic acid binding domain 6 100 2.2E-29 T 25-04-2017 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CLFO_RS07575 bf1302b2a596955792dea29bff5547a6 542 Gene3D G3DSA:3.10.105.10 302 508 1.5E-49 T 25-04-2017 CLFO_RS07575 bf1302b2a596955792dea29bff5547a6 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 89 453 3.9E-80 T 25-04-2017 IPR000914 Solute-binding protein family 5 domain CLFO_RS07575 bf1302b2a596955792dea29bff5547a6 542 Gene3D G3DSA:3.40.190.10 153 301 6.7E-36 T 25-04-2017 CLFO_RS07575 bf1302b2a596955792dea29bff5547a6 542 PIRSF PIRSF002741 3 542 1.6E-117 T 25-04-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLFO_RS07575 bf1302b2a596955792dea29bff5547a6 542 SUPERFAMILY SSF53850 43 537 1.25E-120 T 25-04-2017 CLFO_RS14500 adb2336cfe622c54fbec77025ea4385f 342 SMART SM00387 223 334 3.0E-21 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS14500 adb2336cfe622c54fbec77025ea4385f 342 SUPERFAMILY SSF55874 189 330 1.57E-27 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS14500 adb2336cfe622c54fbec77025ea4385f 342 Gene3D G3DSA:3.30.565.10 184 330 1.8E-28 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS14500 adb2336cfe622c54fbec77025ea4385f 342 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 225 330 2.3E-17 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS06625 bb68287812a388cb52a4826a3ba7a0f2 338 SUPERFAMILY SSF53850 41 326 2.01E-52 T 25-04-2017 CLFO_RS06625 bb68287812a388cb52a4826a3ba7a0f2 338 Gene3D G3DSA:3.40.190.10 136 258 1.6E-21 T 25-04-2017 CLFO_RS06625 bb68287812a388cb52a4826a3ba7a0f2 338 Gene3D G3DSA:3.40.190.10 41 120 1.2E-40 T 25-04-2017 CLFO_RS06625 bb68287812a388cb52a4826a3ba7a0f2 338 Gene3D G3DSA:3.40.190.10 259 326 1.2E-40 T 25-04-2017 CLFO_RS06625 bb68287812a388cb52a4826a3ba7a0f2 338 Pfam PF16868 NMT1-like family 44 325 2.4E-73 T 25-04-2017 IPR011852 TRAP transporter solute receptor, TAXI family CLFO_RS06625 bb68287812a388cb52a4826a3ba7a0f2 338 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 325 1.0E-62 T 25-04-2017 IPR011852 TRAP transporter solute receptor, TAXI family CLFO_RS16680 6ab568b42aac4cbb884c5c99eab5bc17 491 SUPERFAMILY SSF103473 43 480 1.22E-35 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS16680 6ab568b42aac4cbb884c5c99eab5bc17 491 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 42 479 9.2E-112 T 25-04-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CLFO_RS16680 6ab568b42aac4cbb884c5c99eab5bc17 491 Gene3D G3DSA:1.20.1250.20 47 240 4.3E-12 T 25-04-2017 CLFO_RS16680 6ab568b42aac4cbb884c5c99eab5bc17 491 Gene3D G3DSA:1.20.1250.20 252 467 1.5E-16 T 25-04-2017 CLFO_RS16680 6ab568b42aac4cbb884c5c99eab5bc17 491 Pfam PF13347 MFS/sugar transport protein 44 466 1.3E-103 T 25-04-2017 CLFO_RS21365 27111f34b8f27aad90c4d270a02b2074 195 Pfam PF06866 Protein of unknown function (DUF1256) 12 179 1.7E-62 T 25-04-2017 IPR009665 Protein of unknown function DUF1256 CLFO_RS21365 27111f34b8f27aad90c4d270a02b2074 195 SUPERFAMILY SSF53163 11 192 1.02E-50 T 25-04-2017 IPR023430 Peptidase HybD-like domain CLFO_RS21365 27111f34b8f27aad90c4d270a02b2074 195 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 40 181 5.4E-67 T 25-04-2017 IPR009665 Protein of unknown function DUF1256 CLFO_RS05425 35582787c612784eb6fa1f5662115f64 330 SUPERFAMILY SSF48179 184 328 1.19E-67 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS05425 35582787c612784eb6fa1f5662115f64 330 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 178 1.2E-75 T 25-04-2017 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CLFO_RS05425 35582787c612784eb6fa1f5662115f64 330 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 2 329 43.896 T 25-04-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CLFO_RS05425 35582787c612784eb6fa1f5662115f64 330 Gene3D G3DSA:3.50.50.60 5 37 1.8E-5 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS05425 35582787c612784eb6fa1f5662115f64 330 Gene3D G3DSA:1.10.1040.10 38 325 1.2E-111 T 25-04-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLFO_RS05425 35582787c612784eb6fa1f5662115f64 330 SUPERFAMILY SSF51735 3 183 1.6E-73 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS05425 35582787c612784eb6fa1f5662115f64 330 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 6.2E-65 T 25-04-2017 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CLFO_RS05425 35582787c612784eb6fa1f5662115f64 330 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 328 7.8E-142 T 25-04-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CLFO_RS04850 1d01088bc5df5721e68dd0ecbe084f9f 169 Gene3D G3DSA:3.30.70.940 1 105 3.0E-18 T 25-04-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CLFO_RS04850 1d01088bc5df5721e68dd0ecbe084f9f 169 SMART SM00738 1 103 2.2E-4 T 25-04-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CLFO_RS04850 1d01088bc5df5721e68dd0ecbe084f9f 169 SUPERFAMILY SSF82679 1 106 8.11E-21 T 25-04-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CLFO_RS04850 1d01088bc5df5721e68dd0ecbe084f9f 169 SUPERFAMILY SSF50104 119 163 2.71E-7 T 25-04-2017 IPR008991 Translation protein SH3-like domain CLFO_RS04850 1d01088bc5df5721e68dd0ecbe084f9f 169 Gene3D G3DSA:2.30.30.30 117 161 2.2E-9 T 25-04-2017 IPR014722 Ribosomal protein L2 domain 2 CLFO_RS04850 1d01088bc5df5721e68dd0ecbe084f9f 169 Pfam PF02357 Transcription termination factor nusG 1 99 5.3E-14 T 25-04-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CLFO_RS14450 b4521248bb15dccad2307f19510a531f 564 Pfam PF00732 GMC oxidoreductase 227 330 6.9E-12 T 25-04-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CLFO_RS14450 b4521248bb15dccad2307f19510a531f 564 SUPERFAMILY SSF51905 1 181 2.88E-48 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14450 b4521248bb15dccad2307f19510a531f 564 SUPERFAMILY SSF51905 503 560 2.88E-48 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14450 b4521248bb15dccad2307f19510a531f 564 SUPERFAMILY SSF51905 224 330 2.88E-48 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14450 b4521248bb15dccad2307f19510a531f 564 Gene3D G3DSA:3.50.50.60 228 332 4.0E-65 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14450 b4521248bb15dccad2307f19510a531f 564 Gene3D G3DSA:3.50.50.60 2 152 4.0E-65 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14450 b4521248bb15dccad2307f19510a531f 564 Gene3D G3DSA:3.50.50.60 464 561 4.0E-65 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS14450 b4521248bb15dccad2307f19510a531f 564 Pfam PF05199 GMC oxidoreductase 447 553 8.8E-10 T 25-04-2017 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CLFO_RS13685 9dea4b817555b739d39746ea0d4939d6 438 Gene3D G3DSA:2.120.10.30 120 413 5.1E-19 T 25-04-2017 IPR011042 Six-bladed beta-propeller, TolB-like CLFO_RS13685 9dea4b817555b739d39746ea0d4939d6 438 SUPERFAMILY SSF69304 120 364 1.57E-17 T 25-04-2017 CLFO_RS09785 d4c8fc3f232a846888422155baab3541 373 Pfam PF12555 Thiamine pyrophosphokinase C terminal 320 370 2.0E-13 T 25-04-2017 IPR022215 Thiamine pyrophosphokinase C-terminal CLFO_RS09785 d4c8fc3f232a846888422155baab3541 373 SUPERFAMILY SSF63999 160 321 6.71E-32 T 25-04-2017 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLFO_RS09785 d4c8fc3f232a846888422155baab3541 373 Gene3D G3DSA:3.40.50.10240 171 240 7.2E-11 T 25-04-2017 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 CLFO_RS17610 895362e9ee8983ad76668b177df3a190 320 Gene3D G3DSA:3.20.20.70 2 297 4.0E-79 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS17610 895362e9ee8983ad76668b177df3a190 320 Pfam PF06463 Molybdenum Cofactor Synthesis C 181 302 2.5E-36 T 25-04-2017 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS17610 895362e9ee8983ad76668b177df3a190 320 Pfam PF04055 Radical SAM superfamily 14 175 1.6E-29 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS17610 895362e9ee8983ad76668b177df3a190 320 SMART SM00729 10 214 8.0E-11 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS17610 895362e9ee8983ad76668b177df3a190 320 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 320 2.0E-114 T 25-04-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS17610 895362e9ee8983ad76668b177df3a190 320 Pfam PF13353 4Fe-4S single cluster domain 20 121 2.2E-7 T 25-04-2017 CLFO_RS17610 895362e9ee8983ad76668b177df3a190 320 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 1 320 38.244 T 25-04-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS17610 895362e9ee8983ad76668b177df3a190 320 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 16 27 - T 25-04-2017 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CLFO_RS17610 895362e9ee8983ad76668b177df3a190 320 SUPERFAMILY SSF102114 3 282 1.31E-74 T 25-04-2017 CLFO_RS09885 f4ff39a3c8d40044eb58b66fd4ec5c6e 140 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 21 86 2.2E-4 T 25-04-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLFO_RS09885 f4ff39a3c8d40044eb58b66fd4ec5c6e 140 Gene3D G3DSA:1.10.287.1080 1 77 3.3E-7 T 25-04-2017 CLFO_RS09885 f4ff39a3c8d40044eb58b66fd4ec5c6e 140 SUPERFAMILY SSF101386 6 89 4.11E-8 T 25-04-2017 CLFO_RS05200 5924261e7615dc07c421d1b65737d17c 159 Pfam PF04306 Protein of unknown function (DUF456) 21 156 8.4E-29 T 25-04-2017 IPR007403 Protein of unknown function DUF456 CLFO_RS18335 a8722b748f845f0c4ea070a590728066 160 Pfam PF03773 Predicted permease 37 159 1.2E-9 T 25-04-2017 IPR005524 Predicted permease DUF318 CLFO_RS08150 ecdb636106b2f6dfe9b4040dcd3bda40 148 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 42 129 5.1E-33 T 25-04-2017 IPR014197 Sporulation protein YunB CLFO_RS08150 ecdb636106b2f6dfe9b4040dcd3bda40 148 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 11 133 1.5E-42 T 25-04-2017 IPR014197 Sporulation protein YunB CLFO_RS00885 213f9411fac7967e41fd52079db14214 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 315 8.4E-141 T 25-04-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CLFO_RS00885 213f9411fac7967e41fd52079db14214 336 Gene3D G3DSA:3.30.540.10 1 173 5.3E-62 T 25-04-2017 CLFO_RS00885 213f9411fac7967e41fd52079db14214 336 Gene3D G3DSA:3.30.540.10 174 321 1.9E-43 T 25-04-2017 CLFO_RS00885 213f9411fac7967e41fd52079db14214 336 SUPERFAMILY SSF56655 1 319 6.04E-106 T 25-04-2017 CLFO_RS00885 213f9411fac7967e41fd52079db14214 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 322 4.2E-124 T 25-04-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CLFO_RS00885 213f9411fac7967e41fd52079db14214 336 PIRSF PIRSF004532 1 326 9.6E-144 T 25-04-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CLFO_RS06360 6bd574351a7952861c3a93d6da43fd27 315 Pfam PF13673 Acetyltransferase (GNAT) domain 206 297 8.4E-14 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS06360 6bd574351a7952861c3a93d6da43fd27 315 Gene3D G3DSA:1.10.10.10 10 144 4.0E-29 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06360 6bd574351a7952861c3a93d6da43fd27 315 SMART SM00347 28 128 1.9E-15 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS06360 6bd574351a7952861c3a93d6da43fd27 315 SUPERFAMILY SSF46785 9 143 2.73E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS06360 6bd574351a7952861c3a93d6da43fd27 315 SUPERFAMILY SSF55729 164 302 4.25E-25 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS06360 6bd574351a7952861c3a93d6da43fd27 315 Gene3D G3DSA:3.40.630.30 157 309 4.1E-33 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS06360 6bd574351a7952861c3a93d6da43fd27 315 Pfam PF01047 MarR family 36 91 3.1E-12 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS00535 b9f745972163473eb322c65e8231074b 101 SUPERFAMILY SSF160537 1 84 1.57E-32 T 25-04-2017 IPR007170 Stage V sporulation protein G GO:0030435 CLFO_RS00535 b9f745972163473eb322c65e8231074b 101 Gene3D G3DSA:3.30.1120.40 1 82 6.7E-38 T 25-04-2017 IPR007170 Stage V sporulation protein G GO:0030435 CLFO_RS00535 b9f745972163473eb322c65e8231074b 101 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 93 27.908 T 25-04-2017 IPR007170 Stage V sporulation protein G GO:0030435 CLFO_RS00535 b9f745972163473eb322c65e8231074b 101 Pfam PF04026 SpoVG 1 82 3.4E-37 T 25-04-2017 IPR007170 Stage V sporulation protein G GO:0030435 CLFO_RS14850 3ba6effdfa27c3a2b2f573cb0b6ffaaf 147 SUPERFAMILY SSF51306 12 96 1.57E-6 T 25-04-2017 IPR015927 Peptidase S24/S26A/S26B/S26C CLFO_RS18055 348006d1cf181e5d4b1e449631ba9007 434 Gene3D G3DSA:3.20.20.140 70 407 1.7E-110 T 25-04-2017 CLFO_RS18055 348006d1cf181e5d4b1e449631ba9007 434 Gene3D G3DSA:2.30.40.10 3 69 1.5E-25 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS18055 348006d1cf181e5d4b1e449631ba9007 434 ProSitePatterns PS00482 Dihydroorotase signature 1. 58 66 - T 25-04-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 CLFO_RS18055 348006d1cf181e5d4b1e449631ba9007 434 ProSitePatterns PS00483 Dihydroorotase signature 2. 303 314 - T 25-04-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 CLFO_RS18055 348006d1cf181e5d4b1e449631ba9007 434 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 424 1.2E-136 T 25-04-2017 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 CLFO_RS18055 348006d1cf181e5d4b1e449631ba9007 434 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 425 43.398 T 25-04-2017 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 CLFO_RS18055 348006d1cf181e5d4b1e449631ba9007 434 Pfam PF01979 Amidohydrolase family 51 420 9.5E-39 T 25-04-2017 IPR006680 Amidohydrolase-related GO:0016787 CLFO_RS18055 348006d1cf181e5d4b1e449631ba9007 434 SUPERFAMILY SSF51338 1 54 5.86E-33 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS18055 348006d1cf181e5d4b1e449631ba9007 434 SUPERFAMILY SSF51338 367 428 5.86E-33 T 25-04-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CLFO_RS18055 348006d1cf181e5d4b1e449631ba9007 434 SUPERFAMILY SSF51556 55 367 3.2E-107 T 25-04-2017 IPR032466 Metal-dependent hydrolase CLFO_RS15940 9f9d8e73ab3d25a4d3fb733865af2830 259 SUPERFAMILY SSF161098 53 240 2.09E-22 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15940 9f9d8e73ab3d25a4d3fb733865af2830 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 257 2.2E-29 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15940 9f9d8e73ab3d25a4d3fb733865af2830 259 Gene3D G3DSA:1.10.3720.10 52 256 9.5E-23 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS18010 acc04eefcd899f939ab74546d9a3f126 321 SMART SM00471 163 298 3.4E-4 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS18010 acc04eefcd899f939ab74546d9a3f126 321 Gene3D G3DSA:2.40.50.140 3 99 7.1E-5 T 25-04-2017 IPR012340 Nucleic acid-binding, OB-fold CLFO_RS18010 acc04eefcd899f939ab74546d9a3f126 321 SUPERFAMILY SSF109604 146 287 5.65E-15 T 25-04-2017 CLFO_RS18010 acc04eefcd899f939ab74546d9a3f126 321 Gene3D G3DSA:1.10.3210.10 166 287 1.4E-10 T 25-04-2017 IPR006674 HD domain CLFO_RS18010 acc04eefcd899f939ab74546d9a3f126 321 Pfam PF01336 OB-fold nucleic acid binding domain 29 94 1.0E-6 T 25-04-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CLFO_RS19905 0175c224f8541fadc63e6e2fba554fa1 172 SUPERFAMILY SSF49329 32 169 6.81E-40 T 25-04-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CLFO_RS19905 0175c224f8541fadc63e6e2fba554fa1 172 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 33 168 3.8E-34 T 25-04-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CLFO_RS19905 0175c224f8541fadc63e6e2fba554fa1 172 Gene3D G3DSA:2.60.40.200 32 169 7.7E-43 T 25-04-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CLFO_RS19905 0175c224f8541fadc63e6e2fba554fa1 172 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 157 168 - T 25-04-2017 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CLFO_RS19905 0175c224f8541fadc63e6e2fba554fa1 172 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 74 84 - T 25-04-2017 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CLFO_RS16580 f0ed9fec75b63f7ac5e278e24968c050 304 Gene3D G3DSA:3.90.1200.10 69 289 4.8E-28 T 25-04-2017 CLFO_RS16580 f0ed9fec75b63f7ac5e278e24968c050 304 SUPERFAMILY SSF56112 22 288 3.29E-41 T 25-04-2017 IPR011009 Protein kinase-like domain CLFO_RS16580 f0ed9fec75b63f7ac5e278e24968c050 304 Pfam PF01633 Choline/ethanolamine kinase 43 231 3.5E-22 T 25-04-2017 CLFO_RS16390 0000d34f836aa820823a9fd9f237de23 112 Pfam PF03551 Transcriptional regulator PadR-like family 16 90 1.3E-24 T 25-04-2017 IPR005149 Transcription regulator PadR, N-terminal CLFO_RS16390 0000d34f836aa820823a9fd9f237de23 112 Gene3D G3DSA:1.10.10.10 3 108 2.6E-35 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS16390 0000d34f836aa820823a9fd9f237de23 112 SUPERFAMILY SSF46785 12 111 4.98E-30 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS17385 aa1c65cde33af884faff8eddbaef7e39 609 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 122 521 4.9E-59 T 25-04-2017 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 CLFO_RS17385 aa1c65cde33af884faff8eddbaef7e39 609 Gene3D G3DSA:3.40.50.300 331 531 4.1E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17385 aa1c65cde33af884faff8eddbaef7e39 609 Gene3D G3DSA:3.40.50.300 63 188 4.1E-67 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS17385 aa1c65cde33af884faff8eddbaef7e39 609 SUPERFAMILY SSF52540 118 532 3.22E-48 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10865 95067ddca374d02239b8cb2417073bd0 294 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 171 225 3.9E-15 T 25-04-2017 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CLFO_RS10865 95067ddca374d02239b8cb2417073bd0 294 SUPERFAMILY SSF55120 2 220 2.82E-79 T 25-04-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS10865 95067ddca374d02239b8cb2417073bd0 294 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 170 2.8E-59 T 25-04-2017 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CLFO_RS10865 95067ddca374d02239b8cb2417073bd0 294 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 293 18.654 T 25-04-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS10865 95067ddca374d02239b8cb2417073bd0 294 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 2 209 1.1E-75 T 25-04-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CLFO_RS13635 e366f73c65a4bc96af03a994246172a9 437 Pfam PF03390 2-hydroxycarboxylate transporter family 14 430 5.0E-163 T 25-04-2017 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CLFO_RS13635 e366f73c65a4bc96af03a994246172a9 437 PIRSF PIRSF005348 2 437 3.3E-167 T 25-04-2017 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CLFO_RS06405 f4e1223c1f65e7853e3f51eb58705a72 298 Pfam PF14336 Domain of unknown function (DUF4392) 9 282 7.0E-90 T 25-04-2017 IPR025504 Domain of unknown function DUF4392 CLFO_RS11300 ba154bd6d8789809d441af05526c1282 60 SUPERFAMILY SSF57829 1 57 7.94E-22 T 25-04-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 CLFO_RS11300 ba154bd6d8789809d441af05526c1282 60 Pfam PF01783 Ribosomal L32p protein family 2 57 2.6E-25 T 25-04-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11300 ba154bd6d8789809d441af05526c1282 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 56 20.605 T 25-04-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS11300 ba154bd6d8789809d441af05526c1282 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 56 1.1E-25 T 25-04-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS14410 6ebbc469b47490068d3c338dfa2acc6a 97 Pfam PF07875 Coat F domain 14 75 4.4E-20 T 25-04-2017 IPR012851 Spore coat protein CotF-like CLFO_RS15260 304c98b966ac861a5f99408a91a7bb3c 200 Pfam PF01810 LysE type translocator 12 198 1.1E-25 T 25-04-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CLFO_RS00860 67c670ccd96680f5eedbba64bdff0a83 235 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 231 2.7E-89 T 25-04-2017 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CLFO_RS00860 67c670ccd96680f5eedbba64bdff0a83 235 Pfam PF00977 Histidine biosynthesis protein 3 227 3.8E-83 T 25-04-2017 IPR006062 Histidine biosynthesis GO:0000105 CLFO_RS00860 67c670ccd96680f5eedbba64bdff0a83 235 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 234 37.584 T 25-04-2017 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CLFO_RS00860 67c670ccd96680f5eedbba64bdff0a83 235 Gene3D G3DSA:3.20.20.70 1 233 9.4E-88 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS00860 67c670ccd96680f5eedbba64bdff0a83 235 SUPERFAMILY SSF51366 1 233 8.75E-78 T 25-04-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CLFO_RS15695 c50e32fdc6e9b5619938ae544f074dd4 405 SUPERFAMILY SSF53686 10 312 3.93E-98 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS15695 c50e32fdc6e9b5619938ae544f074dd4 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 306 8.4E-80 T 25-04-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLFO_RS15695 c50e32fdc6e9b5619938ae544f074dd4 405 Gene3D G3DSA:3.40.50.1100 74 324 1.9E-80 T 25-04-2017 CLFO_RS15695 c50e32fdc6e9b5619938ae544f074dd4 405 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 26 402 6.6E-138 T 25-04-2017 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CLFO_RS15695 c50e32fdc6e9b5619938ae544f074dd4 405 SUPERFAMILY SSF55021 327 398 1.59E-5 T 25-04-2017 CLFO_RS15695 c50e32fdc6e9b5619938ae544f074dd4 405 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 25-04-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CLFO_RS09275 0a38c1f36e28348f9fcaf521a1bee9f2 88 Pfam PF06135 Bacterial protein of unknown function (DUF965) 8 83 4.2E-38 T 25-04-2017 IPR009309 Uncharacterised protein family UPF0297 CLFO_RS09275 0a38c1f36e28348f9fcaf521a1bee9f2 88 PIRSF PIRSF037258 2 88 2.4E-40 T 25-04-2017 IPR009309 Uncharacterised protein family UPF0297 CLFO_RS09275 0a38c1f36e28348f9fcaf521a1bee9f2 88 Hamap MF_01507 UPF0297 protein . 2 85 26.758 T 25-04-2017 IPR009309 Uncharacterised protein family UPF0297 CLFO_RS06665 db14cda4357501895545d4c164d03def 375 Pfam PF11796 Protein of unknown function N-terminus (DUF3323) 1 194 1.1E-39 T 25-04-2017 IPR024466 Conserved hypothetical protein CHP02679, N terminus CLFO_RS06665 db14cda4357501895545d4c164d03def 375 SUPERFAMILY SSF56726 211 321 1.16E-8 T 25-04-2017 IPR002815 Spo11/DNA topoisomerase VI subunit A GO:0000737|GO:0003677|GO:0005694 Reactome: R-HSA-912446 CLFO_RS06665 db14cda4357501895545d4c164d03def 375 Pfam PF09664 Protein of unknown function C-terminus (DUF2399) 218 369 6.5E-34 T 25-04-2017 IPR024465 Domain of unknown function DUF2399 CLFO_RS06665 db14cda4357501895545d4c164d03def 375 TIGRFAM TIGR02679 TIGR02679: TIGR02679 family protein 7 369 4.8E-59 T 25-04-2017 IPR013495 Conserved hypothetical protein CHP02679 CLFO_RS06665 db14cda4357501895545d4c164d03def 375 Gene3D G3DSA:3.40.1360.10 217 301 3.0E-7 T 25-04-2017 CLFO_RS03425 7777ed92aca568d703a2977e19c69cb6 513 Pfam PF13751 Transposase DDE domain 360 478 2.3E-19 T 25-04-2017 IPR025668 Transposase DDE domain CLFO_RS03425 7777ed92aca568d703a2977e19c69cb6 513 Pfam PF05598 Transposase domain (DUF772) 69 137 4.8E-17 T 25-04-2017 IPR008490 Transposase InsH, N-terminal CLFO_RS06640 3d764522871ed8e4126c11b7c508d739 132 SMART SM00876 41 132 3.3E-34 T 25-04-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLFO_RS06640 3d764522871ed8e4126c11b7c508d739 132 Gene3D G3DSA:3.20.20.70 2 131 5.6E-37 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS06640 3d764522871ed8e4126c11b7c508d739 132 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 41 131 8.0E-17 T 25-04-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CLFO_RS06640 3d764522871ed8e4126c11b7c508d739 132 SUPERFAMILY SSF102114 2 130 6.15E-30 T 25-04-2017 CLFO_RS05015 9162045348eb600427c1e0c281df95ef 356 Gene3D G3DSA:3.10.350.10 169 209 1.6E-15 T 25-04-2017 IPR018392 LysM domain CLFO_RS05015 9162045348eb600427c1e0c281df95ef 356 SMART SM00257 169 212 3.6E-13 T 25-04-2017 IPR018392 LysM domain CLFO_RS05015 9162045348eb600427c1e0c281df95ef 356 Pfam PF07486 Cell Wall Hydrolase 252 355 1.1E-26 T 25-04-2017 IPR011105 Cell wall hydrolase, SleB GO:0016787 CLFO_RS05015 9162045348eb600427c1e0c281df95ef 356 Pfam PF01476 LysM domain 170 209 1.0E-13 T 25-04-2017 IPR018392 LysM domain CLFO_RS05015 9162045348eb600427c1e0c281df95ef 356 SUPERFAMILY SSF54106 169 209 3.66E-10 T 25-04-2017 IPR018392 LysM domain CLFO_RS08815 a2770c81a68712facb636e472aed3f89 128 TIGRFAM TIGR02126 phgtail_TP901_1: phage major tail protein, TP901-1 family 17 115 2.6E-11 T 25-04-2017 IPR011855 Phage major tail protein TP901-1 CLFO_RS08815 a2770c81a68712facb636e472aed3f89 128 Pfam PF06199 Phage tail tube protein 14 122 4.8E-24 T 25-04-2017 IPR011855 Phage major tail protein TP901-1 CLFO_RS17890 46fd4c15b46a831dd47e65a6b96d9998 91 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 42 2.3E-6 T 25-04-2017 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CLFO_RS17890 46fd4c15b46a831dd47e65a6b96d9998 91 SUPERFAMILY SSF47598 4 46 5.48E-8 T 25-04-2017 IPR010985 Ribbon-helix-helix GO:0006355 CLFO_RS17890 46fd4c15b46a831dd47e65a6b96d9998 91 Gene3D G3DSA:1.10.1220.10 5 45 6.3E-7 T 25-04-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CLFO_RS12995 47dc737f23f65528797cebf5f25e6936 475 SUPERFAMILY SSF48239 111 299 1.24E-26 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS12995 47dc737f23f65528797cebf5f25e6936 475 Pfam PF07678 A-macroglobulin complement component 131 215 2.3E-4 T 25-04-2017 IPR011626 Alpha-macroglobulin complement component GO:0005615 CLFO_RS12995 47dc737f23f65528797cebf5f25e6936 475 Pfam PF00395 S-layer homology domain 311 354 1.6E-14 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS12995 47dc737f23f65528797cebf5f25e6936 475 Pfam PF00395 S-layer homology domain 374 415 8.0E-8 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS12995 47dc737f23f65528797cebf5f25e6936 475 Gene3D G3DSA:1.50.10.20 109 296 3.5E-26 T 25-04-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLFO_RS12975 d1fee504b0d80df3b09f0bf21c00f911 357 Pfam PF05816 Toxic anion resistance protein (TelA) 29 355 1.0E-110 T 25-04-2017 IPR008863 Toxic anion resistance CLFO_RS12975 d1fee504b0d80df3b09f0bf21c00f911 357 PIRSF PIRSF026508 1 357 1.6E-118 T 25-04-2017 IPR008863 Toxic anion resistance CLFO_RS04980 6f1431f8f840527b1e0fd934251f7dd7 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 13 456 4.4E-101 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS04980 6f1431f8f840527b1e0fd934251f7dd7 458 PIRSF PIRSF002746 6 458 2.9E-140 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS04980 6f1431f8f840527b1e0fd934251f7dd7 458 Pfam PF02447 GntP family permease 11 454 8.3E-129 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS10645 cf92c811694326b82200dd5ed62ec4ca 214 Gene3D G3DSA:3.40.1180.10 2 213 2.5E-46 T 25-04-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CLFO_RS10645 cf92c811694326b82200dd5ed62ec4ca 214 Pfam PF01255 Putative undecaprenyl diphosphate synthase 10 210 6.3E-41 T 25-04-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CLFO_RS10645 cf92c811694326b82200dd5ed62ec4ca 214 SUPERFAMILY SSF64005 2 208 8.37E-47 T 25-04-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CLFO_RS02485 570de9f8aa4d0f30b48239c64d2239da 147 Pfam PF07883 Cupin domain 49 124 1.3E-13 T 25-04-2017 IPR013096 Cupin 2, conserved barrel CLFO_RS02485 570de9f8aa4d0f30b48239c64d2239da 147 Gene3D G3DSA:2.60.120.10 24 143 3.4E-43 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS02485 570de9f8aa4d0f30b48239c64d2239da 147 SUPERFAMILY SSF51182 9 130 2.1E-24 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS13140 c8bf0444dbccf9a3bb0b4ce94c149f22 576 SMART SM00283 300 575 1.4E-57 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS13140 c8bf0444dbccf9a3bb0b4ce94c149f22 576 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 354 574 9.2E-48 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS13140 c8bf0444dbccf9a3bb0b4ce94c149f22 576 Gene3D G3DSA:1.10.287.950 318 532 7.5E-49 T 25-04-2017 CLFO_RS13140 c8bf0444dbccf9a3bb0b4ce94c149f22 576 SUPERFAMILY SSF58104 306 574 4.32E-66 T 25-04-2017 CLFO_RS13140 c8bf0444dbccf9a3bb0b4ce94c149f22 576 SUPERFAMILY SSF58104 239 273 4.32E-66 T 25-04-2017 CLFO_RS13140 c8bf0444dbccf9a3bb0b4ce94c149f22 576 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 189 2.0E-14 T 25-04-2017 IPR024478 4HB MCP domain CLFO_RS13140 c8bf0444dbccf9a3bb0b4ce94c149f22 576 SMART SM00304 516 572 31.0 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS13140 c8bf0444dbccf9a3bb0b4ce94c149f22 576 SMART SM00304 217 271 6.2E-10 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS13140 c8bf0444dbccf9a3bb0b4ce94c149f22 576 Pfam PF00672 HAMP domain 200 267 7.9E-12 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS12470 7647e57a0ad08d9d50a734dde9ce68df 60 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 25-04-2017 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS12470 7647e57a0ad08d9d50a734dde9ce68df 60 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 59 7.1E-23 T 25-04-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS12470 7647e57a0ad08d9d50a734dde9ce68df 60 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 23.509 T 25-04-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS12470 7647e57a0ad08d9d50a734dde9ce68df 60 Pfam PF01165 Ribosomal protein S21 3 56 1.6E-23 T 25-04-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS12470 7647e57a0ad08d9d50a734dde9ce68df 60 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 8.9E-16 T 25-04-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS12470 7647e57a0ad08d9d50a734dde9ce68df 60 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 8.9E-16 T 25-04-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS12470 7647e57a0ad08d9d50a734dde9ce68df 60 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 8.9E-16 T 25-04-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS12470 7647e57a0ad08d9d50a734dde9ce68df 60 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 8.9E-16 T 25-04-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS12470 7647e57a0ad08d9d50a734dde9ce68df 60 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 2.0E-8 T 25-04-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS10150 baf9693d544c10d630e541299182e019 439 Pfam PF03553 Na+/H+ antiporter family 148 403 9.5E-18 T 25-04-2017 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CLFO_RS16215 7a0cb101af816b0967d9cd6875a9955a 384 Pfam PF05569 BlaR1 peptidase M56 58 271 1.6E-32 T 25-04-2017 IPR008756 Peptidase M56 CLFO_RS10230 f03c0cd6ca19b854b3019e033d166b2c 440 Pfam PF04055 Radical SAM superfamily 199 359 1.3E-13 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS10230 f03c0cd6ca19b854b3019e033d166b2c 440 SMART SM00729 194 413 7.2E-16 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS10230 f03c0cd6ca19b854b3019e033d166b2c 440 SUPERFAMILY SSF102114 200 406 7.98E-30 T 25-04-2017 CLFO_RS10230 f03c0cd6ca19b854b3019e033d166b2c 440 Pfam PF02310 B12 binding domain 19 137 5.5E-15 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS10230 f03c0cd6ca19b854b3019e033d166b2c 440 Gene3D G3DSA:3.80.30.20 197 394 5.6E-32 T 25-04-2017 IPR023404 Radical SAM, alpha/beta horseshoe CLFO_RS10230 f03c0cd6ca19b854b3019e033d166b2c 440 TIGRFAM TIGR04385 B12_rSAM_cofa1: putative variant cofactor biosynthesis B12-binding domain/radical SAM domain protein 1 2 438 1.8E-192 T 25-04-2017 IPR030837 Putative variant cofactor biosynthesis B12-binding domain/radical SAM domain protein 1 CLFO_RS06310 1135c03351ced47bab245da281281a27 149 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 60 1.0E-6 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS06310 1135c03351ced47bab245da281281a27 149 Pfam PF01799 [2Fe-2S] binding domain 72 143 3.4E-22 T 25-04-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLFO_RS06310 1135c03351ced47bab245da281281a27 149 SUPERFAMILY SSF54292 2 77 4.46E-17 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS06310 1135c03351ced47bab245da281281a27 149 Gene3D G3DSA:3.10.20.30 1 73 2.5E-19 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS06310 1135c03351ced47bab245da281281a27 149 SUPERFAMILY SSF47741 72 147 4.19E-24 T 25-04-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLFO_RS06310 1135c03351ced47bab245da281281a27 149 Gene3D G3DSA:1.10.150.120 74 146 3.1E-24 T 25-04-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CLFO_RS09985 0425a9e25c475d6ce934746eb7d22805 251 Gene3D G3DSA:3.40.50.300 1 227 3.5E-63 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09985 0425a9e25c475d6ce934746eb7d22805 251 SUPERFAMILY SSF52540 1 226 7.41E-59 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09985 0425a9e25c475d6ce934746eb7d22805 251 SMART SM00382 26 213 3.5E-8 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS09985 0425a9e25c475d6ce934746eb7d22805 251 Pfam PF00005 ABC transporter 17 164 9.7E-33 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS05665 ef771df8c5be8e05c5e7f11a4c2d271a 391 SUPERFAMILY SSF81606 9 220 1.57E-7 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS05665 ef771df8c5be8e05c5e7f11a4c2d271a 391 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 30 219 1.9E-14 T 25-04-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CLFO_RS14380 035fe6205451bd1d831cff6c53d7f3a7 627 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 14 621 4.1E-189 T 25-04-2017 IPR011853 TRAP transporter, 4TM/12TM fusion protein CLFO_RS14380 035fe6205451bd1d831cff6c53d7f3a7 627 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 111 542 2.6E-86 T 25-04-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLFO_RS09130 7a8d1541e8be6ca0934c229ffe02b414 546 SUPERFAMILY SSF89372 17 276 1.44E-7 T 25-04-2017 CLFO_RS09130 7a8d1541e8be6ca0934c229ffe02b414 546 Gene3D G3DSA:2.120.10.10 191 315 5.4E-4 T 25-04-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CLFO_RS13115 a2f71f01e2c3c58fcc089ae675f99804 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 306 5.3E-48 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS19895 5f13616336d53974fd8d842208391e2e 152 PIRSF PIRSF010607 1 152 5.3E-53 T 25-04-2017 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 CLFO_RS19895 5f13616336d53974fd8d842208391e2e 152 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 150 1.5E-53 T 25-04-2017 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 CLFO_RS07495 2ed0d6d2f84f012b74135b1162ba5711 348 SUPERFAMILY SSF55383 288 341 1.26E-14 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS07495 2ed0d6d2f84f012b74135b1162ba5711 348 Gene3D G3DSA:3.90.70.10 21 254 3.8E-18 T 25-04-2017 CLFO_RS07495 2ed0d6d2f84f012b74135b1162ba5711 348 Pfam PF07833 Copper amine oxidase N-terminal domain 286 346 5.6E-16 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS07495 2ed0d6d2f84f012b74135b1162ba5711 348 Gene3D G3DSA:3.30.457.10 287 336 7.4E-15 T 25-04-2017 IPR012854 Copper amine oxidase-like, N-terminal CLFO_RS07495 2ed0d6d2f84f012b74135b1162ba5711 348 SUPERFAMILY SSF54001 52 254 1.47E-19 T 25-04-2017 CLFO_RS17000 647ee8502e9de953a763facc99611e02 906 Gene3D G3DSA:3.30.420.40 253 347 7.7E-16 T 25-04-2017 CLFO_RS17000 647ee8502e9de953a763facc99611e02 906 Gene3D G3DSA:3.30.420.40 383 469 7.7E-16 T 25-04-2017 CLFO_RS17000 647ee8502e9de953a763facc99611e02 906 SUPERFAMILY SSF53067 674 726 4.82E-10 T 25-04-2017 CLFO_RS17000 647ee8502e9de953a763facc99611e02 906 SUPERFAMILY SSF53067 461 521 4.82E-10 T 25-04-2017 CLFO_RS17000 647ee8502e9de953a763facc99611e02 906 SUPERFAMILY SSF53067 595 646 4.82E-10 T 25-04-2017 CLFO_RS17000 647ee8502e9de953a763facc99611e02 906 Gene3D G3DSA:3.30.420.40 470 520 5.3E-7 T 25-04-2017 CLFO_RS17000 647ee8502e9de953a763facc99611e02 906 Gene3D G3DSA:3.30.420.40 648 688 5.3E-7 T 25-04-2017 CLFO_RS17000 647ee8502e9de953a763facc99611e02 906 Gene3D G3DSA:3.30.420.40 600 609 5.3E-7 T 25-04-2017 CLFO_RS17000 647ee8502e9de953a763facc99611e02 906 SUPERFAMILY SSF53067 253 444 3.08E-9 T 25-04-2017 CLFO_RS20885 17ec2dcad1323ecd9894e5e673dd11bc 318 SUPERFAMILY SSF103481 223 302 5.89E-13 T 25-04-2017 CLFO_RS20885 17ec2dcad1323ecd9894e5e673dd11bc 318 Pfam PF00892 EamA-like transporter family 156 298 2.4E-13 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS20885 17ec2dcad1323ecd9894e5e673dd11bc 318 Pfam PF00892 EamA-like transporter family 6 139 1.2E-17 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS20885 17ec2dcad1323ecd9894e5e673dd11bc 318 SUPERFAMILY SSF103481 64 139 1.2E-10 T 25-04-2017 CLFO_RS10590 6fbba616862a78204bd01cec247c27e0 650 Gene3D G3DSA:3.40.50.300 4 143 2.3E-17 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10590 6fbba616862a78204bd01cec247c27e0 650 SUPERFAMILY SSF52540 4 212 8.85E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10590 6fbba616862a78204bd01cec247c27e0 650 SUPERFAMILY SSF52540 390 438 8.85E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10590 6fbba616862a78204bd01cec247c27e0 650 Pfam PF13476 AAA domain 7 233 9.6E-20 T 25-04-2017 CLFO_RS03000 32e844129ea4d804efbfe466810935ad 203 Pfam PF05228 CHASE4 domain 72 202 7.5E-19 T 25-04-2017 IPR007892 CHASE4 CLFO_RS00475 c6758c08a30f771f6d2b75badb7f3602 152 SMART SM00450 50 145 1.3E-22 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS00475 c6758c08a30f771f6d2b75badb7f3602 152 Gene3D G3DSA:3.40.250.10 40 139 3.0E-25 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS00475 c6758c08a30f771f6d2b75badb7f3602 152 SUPERFAMILY SSF52821 38 139 3.54E-28 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS00475 c6758c08a30f771f6d2b75badb7f3602 152 Pfam PF00581 Rhodanese-like domain 51 139 8.4E-16 T 25-04-2017 IPR001763 Rhodanese-like domain CLFO_RS12715 ceffd3d0dfe247e1323409088d56e84e 175 SUPERFAMILY SSF55469 2 172 9.68E-42 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS12715 ceffd3d0dfe247e1323409088d56e84e 175 Pfam PF00881 Nitroreductase family 5 60 4.0E-15 T 25-04-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLFO_RS12715 ceffd3d0dfe247e1323409088d56e84e 175 Pfam PF00881 Nitroreductase family 61 149 3.2E-9 T 25-04-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 CLFO_RS12715 ceffd3d0dfe247e1323409088d56e84e 175 Gene3D G3DSA:3.40.109.10 1 174 3.7E-48 T 25-04-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CLFO_RS14680 a821dd51548c0af4300f5b7fc2d4c189 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 419 9.8E-70 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS14680 a821dd51548c0af4300f5b7fc2d4c189 453 Pfam PF01554 MatE 22 183 6.1E-29 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS14680 a821dd51548c0af4300f5b7fc2d4c189 453 Pfam PF01554 MatE 250 403 1.9E-22 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS14680 a821dd51548c0af4300f5b7fc2d4c189 453 PIRSF PIRSF006603 1 452 3.5E-99 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS02815 64b6a8b76c5a7abc2bb7b2d7d3a2a76c 236 Pfam PF12838 4Fe-4S dicluster domain 169 231 1.3E-8 T 25-04-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLFO_RS02815 64b6a8b76c5a7abc2bb7b2d7d3a2a76c 236 Gene3D G3DSA:3.30.70.20 168 231 3.4E-8 T 25-04-2017 CLFO_RS02815 64b6a8b76c5a7abc2bb7b2d7d3a2a76c 236 SUPERFAMILY SSF54862 168 231 3.35E-8 T 25-04-2017 CLFO_RS02815 64b6a8b76c5a7abc2bb7b2d7d3a2a76c 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 170 181 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS09505 b95186b07e2064c944f44712f6728bc5 541 SUPERFAMILY SSF158472 270 318 5.62E-12 T 25-04-2017 CLFO_RS09505 b95186b07e2064c944f44712f6728bc5 541 Gene3D G3DSA:3.30.565.10 377 527 1.0E-11 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09505 b95186b07e2064c944f44712f6728bc5 541 SUPERFAMILY SSF55874 382 526 4.38E-10 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS09505 b95186b07e2064c944f44712f6728bc5 541 SMART SM00304 269 321 2.7E-11 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS09505 b95186b07e2064c944f44712f6728bc5 541 Pfam PF00672 HAMP domain 249 317 4.0E-15 T 25-04-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CLFO_RS09505 b95186b07e2064c944f44712f6728bc5 541 Pfam PF06580 Histidine kinase 326 405 3.1E-24 T 25-04-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CLFO_RS10140 864f207d1b9ad40b1896db3efc9179e1 234 Pfam PF00005 ABC transporter 17 152 1.7E-24 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS10140 864f207d1b9ad40b1896db3efc9179e1 234 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS10140 864f207d1b9ad40b1896db3efc9179e1 234 SMART SM00382 26 202 1.0E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS10140 864f207d1b9ad40b1896db3efc9179e1 234 Gene3D G3DSA:3.40.50.300 1 218 6.4E-51 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10140 864f207d1b9ad40b1896db3efc9179e1 234 SUPERFAMILY SSF52540 2 217 6.44E-50 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01450 473d7f639e2923d26e2a5be6dd850703 233 Pfam PF02348 Cytidylyltransferase 10 211 2.4E-30 T 25-04-2017 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CLFO_RS01450 473d7f639e2923d26e2a5be6dd850703 233 SUPERFAMILY SSF53448 7 232 3.05E-63 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS01450 473d7f639e2923d26e2a5be6dd850703 233 Gene3D G3DSA:3.90.550.10 7 232 2.5E-75 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS11710 04057bca468bdcc91409c48764870ee9 243 Pfam PF05949 Bacterial protein of unknown function (DUF881) 91 237 6.0E-40 T 25-04-2017 IPR010273 Protein of unknown function DUF881 CLFO_RS08555 4fb70941f49b013964fc874c27e68647 358 Pfam PF03060 Nitronate monooxygenase 14 351 7.7E-55 T 25-04-2017 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CLFO_RS08555 4fb70941f49b013964fc874c27e68647 358 Gene3D G3DSA:3.20.20.70 11 287 9.8E-56 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS08555 4fb70941f49b013964fc874c27e68647 358 Gene3D G3DSA:3.20.20.70 320 346 9.8E-56 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS08555 4fb70941f49b013964fc874c27e68647 358 SUPERFAMILY SSF51412 8 348 2.44E-52 T 25-04-2017 CLFO_RS09350 40dd6a13a73824bce82a5ddb3ed8edea 157 SUPERFAMILY SSF103365 5 147 1.06E-33 T 25-04-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CLFO_RS09350 40dd6a13a73824bce82a5ddb3ed8edea 157 Pfam PF01139 tRNA-splicing ligase RtcB 39 109 1.7E-13 T 25-04-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CLFO_RS05750 e564d4098f7453571e9015fd26de1761 163 Pfam PF01930 Domain of unknown function DUF83 4 163 1.5E-47 T 25-04-2017 IPR022765 Dna2/Cas4, domain of unknown function DUF83 CLFO_RS05750 e564d4098f7453571e9015fd26de1761 163 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 4 162 3.2E-20 T 25-04-2017 IPR013343 CRISPR-associated protein Cas4 CLFO_RS20790 4900f28333978e652bc52f898bbbdfde 116 SUPERFAMILY SSF81296 5 114 2.8E-25 T 25-04-2017 IPR014756 Immunoglobulin E-set CLFO_RS20790 4900f28333978e652bc52f898bbbdfde 116 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 20 104 1.0E-10 T 25-04-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 CLFO_RS20790 4900f28333978e652bc52f898bbbdfde 116 Gene3D G3DSA:2.60.40.650 5 114 2.2E-24 T 25-04-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 CLFO_RS11860 706f63d415c5ddae1a0c2b3fa376d033 266 SUPERFAMILY SSF53613 1 260 2.18E-78 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS11860 706f63d415c5ddae1a0c2b3fa376d033 266 Gene3D G3DSA:3.40.1190.20 1 257 1.4E-101 T 25-04-2017 IPR029056 Ribokinase-like CLFO_RS11860 706f63d415c5ddae1a0c2b3fa376d033 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 256 2.5E-101 T 25-04-2017 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS11860 706f63d415c5ddae1a0c2b3fa376d033 266 Pfam PF08543 Phosphomethylpyrimidine kinase 11 254 1.2E-94 T 25-04-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 CLFO_RS13795 cba43ee1195e289745bcc1eaba2b9928 338 SMART SM00729 67 269 0.0025 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS13795 cba43ee1195e289745bcc1eaba2b9928 338 Gene3D G3DSA:3.20.20.70 27 299 1.6E-29 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS13795 cba43ee1195e289745bcc1eaba2b9928 338 SUPERFAMILY SSF102114 34 296 8.76E-26 T 25-04-2017 CLFO_RS17070 f8da70fc786e97f9cc065a31fd2868d6 73 Pfam PF11148 Protein of unknown function (DUF2922) 3 69 3.5E-24 T 25-04-2017 IPR021321 Protein of unknown function DUF2922 CLFO_RS19835 e14e1c6c52435cde3d5c7a626ba66d66 288 Pfam PF06207 Protein of unknown function (DUF1002) 31 248 4.8E-77 T 25-04-2017 IPR009343 Protein of unknown function DUF1002 CLFO_RS08615 0e884bedc3193a312d0975203d248201 211 Gene3D G3DSA:1.10.150.280 120 210 2.5E-22 T 25-04-2017 CLFO_RS08615 0e884bedc3193a312d0975203d248201 211 Pfam PF10531 SLBB domain 65 120 1.8E-14 T 25-04-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS08615 0e884bedc3193a312d0975203d248201 211 Gene3D G3DSA:3.10.560.10 64 119 3.0E-10 T 25-04-2017 CLFO_RS08615 0e884bedc3193a312d0975203d248201 211 SUPERFAMILY SSF47781 137 210 3.11E-27 T 25-04-2017 IPR010994 RuvA domain 2-like CLFO_RS08615 0e884bedc3193a312d0975203d248201 211 Pfam PF12836 Helix-hairpin-helix motif 147 209 1.6E-23 T 25-04-2017 CLFO_RS08615 0e884bedc3193a312d0975203d248201 211 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 150 210 7.1E-18 T 25-04-2017 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CLFO_RS08615 0e884bedc3193a312d0975203d248201 211 SMART SM00278 188 207 5.6 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS08615 0e884bedc3193a312d0975203d248201 211 SMART SM00278 158 177 0.011 T 25-04-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CLFO_RS07370 9c56258de279f5b4784300a0ed3d2c55 175 Pfam PF05119 Phage terminase, small subunit 53 151 8.5E-7 T 25-04-2017 IPR006448 Putative phage terminase, small subunit, P27 family CLFO_RS01915 52c5b7c7dda306a4ecc125915c2d4b6c 133 Pfam PF13673 Acetyltransferase (GNAT) domain 20 115 7.9E-15 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS01915 52c5b7c7dda306a4ecc125915c2d4b6c 133 SUPERFAMILY SSF55729 19 113 7.36E-21 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS01915 52c5b7c7dda306a4ecc125915c2d4b6c 133 Gene3D G3DSA:3.40.630.30 13 118 2.1E-21 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS00080 59d41be02c892c9d4efba224be93cc37 180 SUPERFAMILY SSF117457 4 168 3.53E-52 T 25-04-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLFO_RS00080 59d41be02c892c9d4efba224be93cc37 180 Gene3D G3DSA:3.20.130.10 2 170 2.5E-60 T 25-04-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLFO_RS00080 59d41be02c892c9d4efba224be93cc37 180 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 12 171 1.4E-50 T 25-04-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLFO_RS00080 59d41be02c892c9d4efba224be93cc37 180 Pfam PF05683 Fumarase C-terminus 5 170 2.7E-53 T 25-04-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CLFO_RS10265 7946843cb3dbe4a2561eab90f9687f44 432 Gene3D G3DSA:3.40.640.10 49 274 2.7E-39 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS10265 7946843cb3dbe4a2561eab90f9687f44 432 Pfam PF06838 Methionine gamma-lyase 21 421 8.6E-185 T 25-04-2017 IPR009651 Putative methionine gamma-lyase CLFO_RS10265 7946843cb3dbe4a2561eab90f9687f44 432 SUPERFAMILY SSF53383 50 375 4.8E-44 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS14155 3b30c6146bd51b6973920561438eec4a 108 Gene3D G3DSA:3.10.20.30 20 90 2.0E-7 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS14155 3b30c6146bd51b6973920561438eec4a 108 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 20 98 5.1E-26 T 25-04-2017 CLFO_RS14155 3b30c6146bd51b6973920561438eec4a 108 SUPERFAMILY SSF54292 20 99 1.44E-20 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS01325 f0e1f376bde18bf6db52ce063cb8ec80 72 Pfam PF11148 Protein of unknown function (DUF2922) 3 67 2.0E-21 T 25-04-2017 IPR021321 Protein of unknown function DUF2922 CLFO_RS20160 a50be1e7dc93da0be482881ff452b56a 88 Gene3D G3DSA:2.30.30.100 2 78 6.8E-31 T 25-04-2017 CLFO_RS20160 a50be1e7dc93da0be482881ff452b56a 88 PIRSF PIRSF037257 1 87 2.6E-32 T 25-04-2017 IPR009366 Protein Veg GO:0042710 CLFO_RS20160 a50be1e7dc93da0be482881ff452b56a 88 Pfam PF06257 Biofilm formation stimulator VEG 5 76 2.5E-30 T 25-04-2017 IPR009366 Protein Veg GO:0042710 CLFO_RS12420 c18e0609e68a18f51dae09e4f7a81a48 151 SUPERFAMILY SSF55486 3 150 6.59E-47 T 25-04-2017 CLFO_RS12420 c18e0609e68a18f51dae09e4f7a81a48 151 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 147 4.6E-42 T 25-04-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CLFO_RS12420 c18e0609e68a18f51dae09e4f7a81a48 151 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 150 24.537 T 25-04-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CLFO_RS12420 c18e0609e68a18f51dae09e4f7a81a48 151 Gene3D G3DSA:3.40.390.30 3 149 4.7E-51 T 25-04-2017 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CLFO_RS12420 c18e0609e68a18f51dae09e4f7a81a48 151 Pfam PF02130 Uncharacterized protein family UPF0054 13 146 8.4E-49 T 25-04-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CLFO_RS19540 f3152f56f6d87dc5aed62eb3030f17e1 265 Pfam PF02361 Cobalt transport protein 15 235 1.7E-54 T 25-04-2017 IPR003339 ABC/ECF transporter, transmembrane component CLFO_RS19540 f3152f56f6d87dc5aed62eb3030f17e1 265 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 264 34.939 T 25-04-2017 IPR024919 ECF transporter transmembrane protein EcfT GO:0005215|GO:0006810|GO:0016021 CLFO_RS19590 29b17471a5aa89cd96c4759debc28dce 92 SUPERFAMILY SSF50104 6 86 2.83E-13 T 25-04-2017 IPR008991 Translation protein SH3-like domain CLFO_RS19590 29b17471a5aa89cd96c4759debc28dce 92 Gene3D G3DSA:2.30.30.30 6 87 3.9E-13 T 25-04-2017 IPR014722 Ribosomal protein L2 domain 2 CLFO_RS02515 840d4efece526ad4a1d35f37c80e1553 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 15 32 2.4E-55 T 25-04-2017 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLFO_RS02515 840d4efece526ad4a1d35f37c80e1553 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 2.4E-55 T 25-04-2017 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLFO_RS02515 840d4efece526ad4a1d35f37c80e1553 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 2.4E-55 T 25-04-2017 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLFO_RS02515 840d4efece526ad4a1d35f37c80e1553 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 2.4E-55 T 25-04-2017 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLFO_RS02515 840d4efece526ad4a1d35f37c80e1553 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 156 178 2.4E-55 T 25-04-2017 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLFO_RS02515 840d4efece526ad4a1d35f37c80e1553 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 80 99 2.4E-55 T 25-04-2017 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLFO_RS02515 840d4efece526ad4a1d35f37c80e1553 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 2.4E-55 T 25-04-2017 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLFO_RS02515 840d4efece526ad4a1d35f37c80e1553 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 2.4E-55 T 25-04-2017 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLFO_RS02515 840d4efece526ad4a1d35f37c80e1553 413 SUPERFAMILY SSF144052 4 408 1.11E-133 T 25-04-2017 CLFO_RS02515 840d4efece526ad4a1d35f37c80e1553 413 Pfam PF02073 Thermophilic metalloprotease (M29) 5 408 2.6E-162 T 25-04-2017 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 CLFO_RS15555 64561c326f7a32cec6694a480313f9e2 160 Pfam PF04308 Ribonuclease H-like 13 154 2.1E-48 T 25-04-2017 IPR007405 Bacteriophage KVP40, Orf299 CLFO_RS20895 7324e48662254b25016f4626c4e7168f 209 SUPERFAMILY SSF53335 5 185 1.06E-31 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS20895 7324e48662254b25016f4626c4e7168f 209 Pfam PF08241 Methyltransferase domain 36 131 6.7E-22 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS20895 7324e48662254b25016f4626c4e7168f 209 Gene3D G3DSA:3.40.50.150 5 136 3.9E-33 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS20895 7324e48662254b25016f4626c4e7168f 209 Gene3D G3DSA:3.40.50.150 168 205 3.9E-33 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS04970 4f3005ed7b86dc0aa31af6a5c50e0c99 436 Pfam PF07005 Putative sugar-binding N-terminal domain 4 229 2.2E-59 T 25-04-2017 IPR010737 Putative sugar-binding, N-terminal domain CLFO_RS04970 4f3005ed7b86dc0aa31af6a5c50e0c99 436 SUPERFAMILY SSF142764 4 423 2.88E-92 T 25-04-2017 CLFO_RS04970 4f3005ed7b86dc0aa31af6a5c50e0c99 436 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 248 415 3.4E-29 T 25-04-2017 IPR031475 Putative nucleotide-binding C-terminal domain CLFO_RS15675 a02c6ac2586a2eea69a37a5113804a4a 785 Pfam PF02687 FtsX-like permease family 271 388 3.3E-13 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS15675 a02c6ac2586a2eea69a37a5113804a4a 785 Pfam PF02687 FtsX-like permease family 658 775 1.4E-17 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS18500 b723537a8de76bbe3f002f6ed9cd0997 220 SUPERFAMILY SSF52242 71 213 3.14E-40 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS18500 b723537a8de76bbe3f002f6ed9cd0997 220 Gene3D G3DSA:3.40.50.280 76 213 2.8E-46 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS18500 b723537a8de76bbe3f002f6ed9cd0997 220 SUPERFAMILY SSF47644 4 82 3.79E-18 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS18500 b723537a8de76bbe3f002f6ed9cd0997 220 SMART SM01018 2 85 2.9E-18 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS18500 b723537a8de76bbe3f002f6ed9cd0997 220 Pfam PF02607 B12 binding domain 6 77 1.9E-15 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS18500 b723537a8de76bbe3f002f6ed9cd0997 220 Pfam PF02310 B12 binding domain 92 198 1.7E-24 T 25-04-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CLFO_RS18500 b723537a8de76bbe3f002f6ed9cd0997 220 Gene3D G3DSA:1.10.1240.10 4 75 2.4E-18 T 25-04-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS11040 a7d5478f903a56738775bd4238f0148d 263 Pfam PF01311 Bacterial export proteins, family 1 14 249 5.4E-69 T 25-04-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CLFO_RS11040 a7d5478f903a56738775bd4238f0148d 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 3.8E-25 T 25-04-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CLFO_RS11040 a7d5478f903a56738775bd4238f0148d 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 3.8E-25 T 25-04-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CLFO_RS11040 a7d5478f903a56738775bd4238f0148d 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 3.8E-25 T 25-04-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CLFO_RS11040 a7d5478f903a56738775bd4238f0148d 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 3.8E-25 T 25-04-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CLFO_RS11040 a7d5478f903a56738775bd4238f0148d 263 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 256 1.0E-60 T 25-04-2017 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CLFO_RS17875 04b814ad4827c5fd4ebf9ddcb3d1a277 366 Pfam PF01757 Acyltransferase family 20 335 2.2E-29 T 25-04-2017 IPR002656 Acyltransferase 3 GO:0016747 CLFO_RS06725 06d7b879beee0cf2d97087985f87c9d6 73 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 19 66 1.2E-11 T 25-04-2017 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0003713|GO:0006355 CLFO_RS06725 06d7b879beee0cf2d97087985f87c9d6 73 PIRSF PIRSF037246 1 73 2.7E-38 T 25-04-2017 IPR017154 Uncharacterised conserved protein UCP037246 CLFO_RS05445 c714ed71fe9e4d759dac5e939a2b8b7c 164 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 5 159 8.7E-65 T 25-04-2017 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33 CLFO_RS05445 c714ed71fe9e4d759dac5e939a2b8b7c 164 Gene3D G3DSA:3.20.19.10 2 161 4.9E-36 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS05445 c714ed71fe9e4d759dac5e939a2b8b7c 164 TIGRFAM TIGR02084 leud: 3-isopropylmalate dehydratase, small subunit 5 159 3.7E-82 T 25-04-2017 IPR011824 Hydrolyase LeuD/DmdB, bacterial GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33 CLFO_RS05445 c714ed71fe9e4d759dac5e939a2b8b7c 164 SUPERFAMILY SSF52016 3 162 1.65E-51 T 25-04-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLFO_RS05445 c714ed71fe9e4d759dac5e939a2b8b7c 164 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 3 163 38.477 T 25-04-2017 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33 CLFO_RS05445 c714ed71fe9e4d759dac5e939a2b8b7c 164 Pfam PF00694 Aconitase C-terminal domain 41 106 2.3E-19 T 25-04-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CLFO_RS02195 7a9052ff837614e20044f6ae42f29220 93 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 12 83 5.0E-26 T 25-04-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLFO_RS02195 7a9052ff837614e20044f6ae42f29220 93 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 2 83 7.9E-32 T 25-04-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLFO_RS02195 7a9052ff837614e20044f6ae42f29220 93 Gene3D G3DSA:2.40.50.220 2 88 1.3E-34 T 25-04-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLFO_RS02195 7a9052ff837614e20044f6ae42f29220 93 SUPERFAMILY SSF159133 2 87 1.09E-30 T 25-04-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLFO_RS12355 1855b9c2f7dfe3851396824800b57a3a 160 SUPERFAMILY SSF52218 3 155 1.18E-19 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS12355 1855b9c2f7dfe3851396824800b57a3a 160 Gene3D G3DSA:3.40.50.360 3 89 5.5E-16 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS12355 1855b9c2f7dfe3851396824800b57a3a 160 Pfam PF12724 Flavodoxin domain 4 142 2.5E-23 T 25-04-2017 IPR026816 Flavodoxin domain CLFO_RS11610 9b6e10395184ba9949214ba227658799 185 SMART SM01207 2 171 3.4E-69 T 25-04-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CLFO_RS11610 9b6e10395184ba9949214ba227658799 185 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 181 3.9E-51 T 25-04-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CLFO_RS11610 9b6e10395184ba9949214ba227658799 185 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 1 179 17.752 T 25-04-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CLFO_RS11610 9b6e10395184ba9949214ba227658799 185 Pfam PF02660 Glycerol-3-phosphate acyltransferase 2 170 9.3E-50 T 25-04-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CLFO_RS10055 e57694ec2700be53d74c8c97d83734ba 217 PIRSF PIRSF010130 2 216 2.9E-79 T 25-04-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CLFO_RS10055 e57694ec2700be53d74c8c97d83734ba 217 Pfam PF06130 Phosphate propanoyltransferase 138 203 2.9E-15 T 25-04-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CLFO_RS10055 e57694ec2700be53d74c8c97d83734ba 217 Pfam PF06130 Phosphate propanoyltransferase 30 109 8.0E-28 T 25-04-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CLFO_RS09870 9530d170439cb196484a548b5854e960 137 Gene3D G3DSA:3.60.90.10 2 125 3.1E-50 T 25-04-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CLFO_RS09870 9530d170439cb196484a548b5854e960 137 Pfam PF02675 S-adenosylmethionine decarboxylase 9 115 4.1E-42 T 25-04-2017 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CLFO_RS09870 9530d170439cb196484a548b5854e960 137 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 5 115 2.5E-46 T 25-04-2017 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CLFO_RS09870 9530d170439cb196484a548b5854e960 137 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 3 119 33.351 T 25-04-2017 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CLFO_RS09870 9530d170439cb196484a548b5854e960 137 SUPERFAMILY SSF56276 5 118 1.45E-43 T 25-04-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CLFO_RS12720 bafdfe4f1c75ed93bc424e481688e480 327 Pfam PF03773 Predicted permease 36 324 1.6E-68 T 25-04-2017 IPR005524 Predicted permease DUF318 CLFO_RS19370 c31455e8c62dc631d0f4d074b2e6b8a3 126 Pfam PF14276 Domain of unknown function (DUF4363) 8 125 9.1E-28 T 25-04-2017 IPR025373 Protein of unknown function DUF4363 CLFO_RS13995 7b8a0425fc8cb8e4a39b6060c757a0a4 464 Pfam PF00939 Sodium:sulfate symporter transmembrane region 6 452 2.5E-47 T 25-04-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CLFO_RS13995 7b8a0425fc8cb8e4a39b6060c757a0a4 464 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 33 452 2.5E-59 T 25-04-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CLFO_RS18320 bd5189e04c6c8b443b58ce7b7b094c2c 117 Gene3D G3DSA:3.30.70.120 10 114 2.8E-5 T 25-04-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLFO_RS18320 bd5189e04c6c8b443b58ce7b7b094c2c 117 SUPERFAMILY SSF54913 6 113 8.9E-11 T 25-04-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLFO_RS20335 b8a6fc118098d7deaf18d51774297143 587 Gene3D G3DSA:1.10.599.10 380 579 1.4E-49 T 25-04-2017 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 CLFO_RS20335 b8a6fc118098d7deaf18d51774297143 587 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 227 562 2.1E-67 T 25-04-2017 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS20335 b8a6fc118098d7deaf18d51774297143 587 SMART SM00790 1 208 4.7E-76 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS20335 b8a6fc118098d7deaf18d51774297143 587 SUPERFAMILY SSF56228 1 207 1.09E-50 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS20335 b8a6fc118098d7deaf18d51774297143 587 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 3 205 6.8E-57 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS20335 b8a6fc118098d7deaf18d51774297143 587 Gene3D G3DSA:3.60.9.10 1 208 6.4E-62 T 25-04-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS20335 b8a6fc118098d7deaf18d51774297143 587 SUPERFAMILY SSF48310 214 569 5.62E-95 T 25-04-2017 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CLFO_RS00720 2629ac71375d02ce00f9c2d1a07394dd 382 SUPERFAMILY SSF53756 20 309 1.41E-14 T 25-04-2017 CLFO_RS20915 7ef672db378d5559cb5d514e5b9b7740 116 Pfam PF05717 IS66 Orf2 like protein 9 104 8.8E-34 T 25-04-2017 IPR008878 Transposase IS66, Orf2 CLFO_RS13315 85565ae5a5d2c372bf9f9393a015bdb9 152 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 40 83 2.5E-10 T 25-04-2017 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger CLFO_RS12330 85565ae5a5d2c372bf9f9393a015bdb9 152 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 40 83 2.5E-10 T 25-04-2017 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger CLFO_RS15915 6eaa4812544eed5d60556b54c77c14e0 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 1.8E-44 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15915 6eaa4812544eed5d60556b54c77c14e0 313 Gene3D G3DSA:1.10.3720.10 91 304 1.7E-21 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15915 6eaa4812544eed5d60556b54c77c14e0 313 SUPERFAMILY SSF161098 94 288 1.08E-20 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS02530 8de749fb1ceb9ac0fe186d7e94513b89 241 SUPERFAMILY SSF52540 1 235 5.19E-81 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02530 8de749fb1ceb9ac0fe186d7e94513b89 241 Pfam PF00005 ABC transporter 17 165 5.7E-36 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS02530 8de749fb1ceb9ac0fe186d7e94513b89 241 PIRSF PIRSF039085 1 241 7.6E-123 T 25-04-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CLFO_RS02530 8de749fb1ceb9ac0fe186d7e94513b89 241 Gene3D G3DSA:3.40.50.300 1 236 1.8E-85 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS02530 8de749fb1ceb9ac0fe186d7e94513b89 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS02530 8de749fb1ceb9ac0fe186d7e94513b89 241 SMART SM00382 26 229 2.4E-13 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS00305 34e0f2166c3ff2f9ccb5daffcf2f397b 247 Gene3D G3DSA:3.30.1330.10 17 126 5.0E-5 T 25-04-2017 IPR016188 PurM-like, N-terminal domain CLFO_RS16250 38a0db54731a09dad9e65e12f78962aa 77 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 1 45 2.6E-16 T 25-04-2017 IPR025161 Putative transposase IS4/IS5 family CLFO_RS21135 34cf60de65d974bca23f21a513cdd2c0 99 Pfam PF10704 Protein of unknown function (DUF2508) 33 96 6.7E-16 T 25-04-2017 IPR019644 Protein of unknown function DUF2508 CLFO_RS13025 af8a6008e96ed6a1be6931783f3d4c0d 540 Pfam PF00395 S-layer homology domain 497 540 7.4E-7 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS13025 af8a6008e96ed6a1be6931783f3d4c0d 540 Pfam PF14478 Domain of unknown function (DUF4430) 201 261 3.3E-6 T 25-04-2017 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 CLFO_RS06815 08cab89a38d161901c84ad3f8e1c777d 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 1.1E-39 T 25-04-2017 IPR002178 PTS EIIA type-2 domain CLFO_RS06815 08cab89a38d161901c84ad3f8e1c777d 147 SUPERFAMILY SSF55804 1 146 2.22E-43 T 25-04-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CLFO_RS06815 08cab89a38d161901c84ad3f8e1c777d 147 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 2.3E-43 T 25-04-2017 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 CLFO_RS06815 08cab89a38d161901c84ad3f8e1c777d 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 25-04-2017 IPR002178 PTS EIIA type-2 domain CLFO_RS06815 08cab89a38d161901c84ad3f8e1c777d 147 Gene3D G3DSA:3.40.930.10 1 146 1.5E-51 T 25-04-2017 IPR002178 PTS EIIA type-2 domain CLFO_RS07120 12beb742cc413780ee12af14a5f0ec4d 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 84 5.4E-11 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS07120 12beb742cc413780ee12af14a5f0ec4d 92 SUPERFAMILY SSF54292 3 92 7.68E-22 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS07120 12beb742cc413780ee12af14a5f0ec4d 92 Gene3D G3DSA:3.10.20.30 2 92 2.7E-21 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS16365 e7875ca80be036e48a4a36c4084b2c1d 405 Gene3D G3DSA:3.30.70.270 68 165 8.1E-28 T 25-04-2017 CLFO_RS16365 e7875ca80be036e48a4a36c4084b2c1d 405 Gene3D G3DSA:1.10.150.20 168 240 7.6E-23 T 25-04-2017 CLFO_RS16365 e7875ca80be036e48a4a36c4084b2c1d 405 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 344 4.4E-15 T 25-04-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CLFO_RS16365 e7875ca80be036e48a4a36c4084b2c1d 405 Pfam PF00817 impB/mucB/samB family 8 156 9.5E-46 T 25-04-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CLFO_RS16365 e7875ca80be036e48a4a36c4084b2c1d 405 Pfam PF11798 IMS family HHH motif 169 199 4.6E-7 T 25-04-2017 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CLFO_RS16365 e7875ca80be036e48a4a36c4084b2c1d 405 Gene3D G3DSA:3.30.1490.100 245 345 1.8E-22 T 25-04-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CLFO_RS16365 e7875ca80be036e48a4a36c4084b2c1d 405 SUPERFAMILY SSF100879 243 342 1.59E-23 T 25-04-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CLFO_RS16365 e7875ca80be036e48a4a36c4084b2c1d 405 SUPERFAMILY SSF56672 3 236 6.32E-75 T 25-04-2017 CLFO_RS16365 e7875ca80be036e48a4a36c4084b2c1d 405 Hamap MF_01113 DNA polymerase IV [dinB]. 2 354 35.401 T 25-04-2017 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CLFO_RS06065 489aaef336699bc308991c0f5f02d0bd 382 Gene3D G3DSA:3.20.20.210 149 380 1.9E-30 T 25-04-2017 CLFO_RS06065 489aaef336699bc308991c0f5f02d0bd 382 Gene3D G3DSA:3.20.20.210 4 112 1.9E-30 T 25-04-2017 CLFO_RS06065 489aaef336699bc308991c0f5f02d0bd 382 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 176 378 5.7E-17 T 25-04-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CLFO_RS06065 489aaef336699bc308991c0f5f02d0bd 382 SUPERFAMILY SSF51726 9 137 7.59E-42 T 25-04-2017 CLFO_RS06065 489aaef336699bc308991c0f5f02d0bd 382 SUPERFAMILY SSF51726 178 381 7.59E-42 T 25-04-2017 CLFO_RS01620 618a2dbc4b778c50aa989b744dfd4b6d 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 317 7.7E-44 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS03105 267280ebb1cfb043a1b16bdf6c7c7835 437 SUPERFAMILY SSF55874 311 408 6.72E-6 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS03105 267280ebb1cfb043a1b16bdf6c7c7835 437 Pfam PF14501 GHKL domain 336 428 1.1E-9 T 25-04-2017 IPR032834 Sensor histidine kinase NatK, C-terminal domain CLFO_RS14045 473aeda5dadd44750775b39056f6bedb 300 Pfam PF13353 4Fe-4S single cluster domain 83 194 1.8E-5 T 25-04-2017 CLFO_RS14045 473aeda5dadd44750775b39056f6bedb 300 Pfam PF13353 4Fe-4S single cluster domain 16 54 1.3E-5 T 25-04-2017 CLFO_RS14045 473aeda5dadd44750775b39056f6bedb 300 Pfam PF04055 Radical SAM superfamily 84 230 9.1E-19 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS14045 473aeda5dadd44750775b39056f6bedb 300 ProSitePatterns PS01087 Radical activating enzymes signature. 17 38 - T 25-04-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CLFO_RS14045 473aeda5dadd44750775b39056f6bedb 300 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 6 292 5.2E-112 T 25-04-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLFO_RS14045 473aeda5dadd44750775b39056f6bedb 300 SUPERFAMILY SSF102114 85 283 1.06E-18 T 25-04-2017 CLFO_RS14045 473aeda5dadd44750775b39056f6bedb 300 PIRSF PIRSF000371 1 300 8.0E-109 T 25-04-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CLFO_RS14045 473aeda5dadd44750775b39056f6bedb 300 SUPERFAMILY SSF54862 6 148 6.38E-21 T 25-04-2017 CLFO_RS14045 473aeda5dadd44750775b39056f6bedb 300 Gene3D G3DSA:3.30.70.20 49 119 6.4E-13 T 25-04-2017 CLFO_RS14045 473aeda5dadd44750775b39056f6bedb 300 Gene3D G3DSA:3.80.30.10 124 299 2.5E-61 T 25-04-2017 CLFO_RS00415 149ca805e8a64a32d4714c9d59146b64 478 Gene3D G3DSA:1.10.3090.10 136 389 7.6E-33 T 25-04-2017 CLFO_RS00415 149ca805e8a64a32d4714c9d59146b64 478 SUPERFAMILY SSF81301 7 133 8.18E-26 T 25-04-2017 CLFO_RS00415 149ca805e8a64a32d4714c9d59146b64 478 SMART SM00471 233 396 1.4E-4 T 25-04-2017 IPR003607 HD/PDEase domain CLFO_RS00415 149ca805e8a64a32d4714c9d59146b64 478 SUPERFAMILY SSF81891 277 475 2.35E-41 T 25-04-2017 CLFO_RS00415 149ca805e8a64a32d4714c9d59146b64 478 SUPERFAMILY SSF81891 135 244 2.35E-41 T 25-04-2017 CLFO_RS00415 149ca805e8a64a32d4714c9d59146b64 478 TIGRFAM TIGR00277 HDIG: HDIG domain 273 326 8.5E-10 T 25-04-2017 IPR006675 HDIG domain CLFO_RS00415 149ca805e8a64a32d4714c9d59146b64 478 Pfam PF01743 Poly A polymerase head domain 19 136 2.7E-20 T 25-04-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CLFO_RS00415 149ca805e8a64a32d4714c9d59146b64 478 Pfam PF01966 HD domain 239 359 4.7E-8 T 25-04-2017 IPR006674 HD domain CLFO_RS00415 149ca805e8a64a32d4714c9d59146b64 478 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 162 221 6.3E-10 T 25-04-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CLFO_RS00415 149ca805e8a64a32d4714c9d59146b64 478 Gene3D G3DSA:3.30.460.10 5 135 1.4E-25 T 25-04-2017 CLFO_RS09620 2a8a2eb6b92e249b9e2ca2c673a5ec8e 167 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 25-04-2017 IPR012902 Prokaryotic N-terminal methylation site CLFO_RS09620 2a8a2eb6b92e249b9e2ca2c673a5ec8e 167 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 5 28 1.1E-6 T 25-04-2017 IPR012902 Prokaryotic N-terminal methylation site CLFO_RS09620 2a8a2eb6b92e249b9e2ca2c673a5ec8e 167 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 28 0.0012 T 25-04-2017 IPR012902 Prokaryotic N-terminal methylation site CLFO_RS21105 b09f64efedb2f515672cd05c145ea710 148 Gene3D G3DSA:3.40.5.10 1 51 4.0E-27 T 25-04-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS21105 b09f64efedb2f515672cd05c145ea710 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 25-04-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS21105 b09f64efedb2f515672cd05c145ea710 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 5.5E-49 T 25-04-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS21105 b09f64efedb2f515672cd05c145ea710 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 27.336 T 25-04-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CLFO_RS21105 b09f64efedb2f515672cd05c145ea710 148 SUPERFAMILY SSF55658 1 57 5.06E-21 T 25-04-2017 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CLFO_RS21105 b09f64efedb2f515672cd05c145ea710 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 2.1E-26 T 25-04-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS21105 b09f64efedb2f515672cd05c145ea710 148 Gene3D G3DSA:3.10.430.100 61 148 6.8E-29 T 25-04-2017 IPR020069 Ribosomal protein L9, C-terminal CLFO_RS21105 b09f64efedb2f515672cd05c145ea710 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 3.4E-27 T 25-04-2017 IPR020069 Ribosomal protein L9, C-terminal CLFO_RS21105 b09f64efedb2f515672cd05c145ea710 148 SUPERFAMILY SSF55653 56 148 4.84E-27 T 25-04-2017 IPR020069 Ribosomal protein L9, C-terminal CLFO_RS05240 e6be1ffe84730a6ebff7048570e5afde 93 SUPERFAMILY SSF103007 1 93 9.68E-31 T 25-04-2017 IPR007546 Protein of unknown function DUF503 CLFO_RS05240 e6be1ffe84730a6ebff7048570e5afde 93 Pfam PF04456 Protein of unknown function (DUF503) 3 89 1.4E-32 T 25-04-2017 IPR007546 Protein of unknown function DUF503 CLFO_RS05240 e6be1ffe84730a6ebff7048570e5afde 93 Gene3D G3DSA:3.30.70.1120 1 93 3.1E-34 T 25-04-2017 IPR007546 Protein of unknown function DUF503 CLFO_RS12125 ff6fb5a000db4a1f723d5c67d85ab33c 336 Pfam PF14398 YheC/D like ATP-grasp 89 333 1.5E-56 T 25-04-2017 IPR026838 Endospore coat-associated protein YheC/D CLFO_RS12125 ff6fb5a000db4a1f723d5c67d85ab33c 336 SUPERFAMILY SSF56059 97 306 7.28E-11 T 25-04-2017 CLFO_RS08210 3eab8cf2fa6af8608d638a210b34ffa4 153 Gene3D G3DSA:2.30.110.10 1 151 3.0E-51 T 25-04-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CLFO_RS08210 3eab8cf2fa6af8608d638a210b34ffa4 153 SUPERFAMILY SSF50475 1 151 4.75E-45 T 25-04-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CLFO_RS08210 3eab8cf2fa6af8608d638a210b34ffa4 153 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 12 149 1.4E-19 T 25-04-2017 IPR024747 Pyridoxamine 5'-phosphate oxidase-related CLFO_RS04275 f905ac76883bda7dae4af3a86b407e91 512 Gene3D G3DSA:3.40.47.10 185 293 6.2E-19 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04275 f905ac76883bda7dae4af3a86b407e91 512 PIRSF PIRSF037559 1 512 2.3E-279 T 25-04-2017 IPR017236 Glycine/sarcosine/betaine reductase, component C, beta CLFO_RS04275 f905ac76883bda7dae4af3a86b407e91 512 SUPERFAMILY SSF53901 184 292 1.34E-11 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS04275 f905ac76883bda7dae4af3a86b407e91 512 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 255 332 8.5E-8 T 25-04-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLFO_RS04885 de6e90f13aac6726fea0a2f2b73d8c1c 170 SUPERFAMILY SSF56524 58 139 9.16E-9 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS04885 de6e90f13aac6726fea0a2f2b73d8c1c 170 Pfam PF00174 Oxidoreductase molybdopterin binding domain 77 169 1.7E-7 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS04885 de6e90f13aac6726fea0a2f2b73d8c1c 170 Gene3D G3DSA:3.90.420.10 54 139 2.6E-6 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS08025 ba30f41c40334aee04cee868cab3e6f1 161 Pfam PF13007 Transposase C of IS166 homeodomain 39 113 2.6E-9 T 25-04-2017 IPR024463 Transposase TnpC, homeodomain CLFO_RS15265 7498cee4a7cc33b77f85d79e1ca7699e 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 48 1.4E-14 T 25-04-2017 CLFO_RS15265 7498cee4a7cc33b77f85d79e1ca7699e 146 Gene3D G3DSA:1.10.10.10 2 52 9.4E-20 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15265 7498cee4a7cc33b77f85d79e1ca7699e 146 SMART SM00344 1 108 2.8E-36 T 25-04-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CLFO_RS15265 7498cee4a7cc33b77f85d79e1ca7699e 146 Pfam PF01037 Lrp/AsnC ligand binding domain 69 138 3.5E-19 T 25-04-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLFO_RS15265 7498cee4a7cc33b77f85d79e1ca7699e 146 SUPERFAMILY SSF46785 1 61 6.72E-14 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS15265 7498cee4a7cc33b77f85d79e1ca7699e 146 Gene3D G3DSA:3.30.70.920 54 144 2.6E-25 T 25-04-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLFO_RS15265 7498cee4a7cc33b77f85d79e1ca7699e 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.0E-9 T 25-04-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLFO_RS15265 7498cee4a7cc33b77f85d79e1ca7699e 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.0E-9 T 25-04-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLFO_RS15265 7498cee4a7cc33b77f85d79e1ca7699e 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.0E-9 T 25-04-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 CLFO_RS15265 7498cee4a7cc33b77f85d79e1ca7699e 146 SUPERFAMILY SSF54909 63 143 5.09E-21 T 25-04-2017 IPR011008 Dimeric alpha-beta barrel CLFO_RS13080 aaea43a2c32612d22dec3fd79c2a56f9 424 SMART SM00729 35 252 3.9E-40 T 25-04-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CLFO_RS13080 aaea43a2c32612d22dec3fd79c2a56f9 424 Gene3D G3DSA:3.80.30.20 36 263 1.4E-32 T 25-04-2017 IPR023404 Radical SAM, alpha/beta horseshoe CLFO_RS13080 aaea43a2c32612d22dec3fd79c2a56f9 424 Pfam PF04055 Radical SAM superfamily 40 205 2.6E-18 T 25-04-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 CLFO_RS13080 aaea43a2c32612d22dec3fd79c2a56f9 424 SUPERFAMILY SSF102114 7 396 2.75E-76 T 25-04-2017 CLFO_RS09185 2793ed68f84f7c1a60a485ec805dbcc1 250 SUPERFAMILY SSF53448 2 232 1.64E-66 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS09185 2793ed68f84f7c1a60a485ec805dbcc1 250 Gene3D G3DSA:3.90.550.10 2 232 1.4E-61 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS09185 2793ed68f84f7c1a60a485ec805dbcc1 250 Pfam PF00483 Nucleotidyl transferase 2 230 1.2E-52 T 25-04-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CLFO_RS06945 be0b8580003291239f643edb060a1611 98 Pfam PF06949 Protein of unknown function (DUF1292) 29 89 1.2E-13 T 25-04-2017 IPR009711 Uncharacterised protein family UPF0473 CLFO_RS02295 46f6bc94473fad768894a56a019bc8eb 378 TIGRFAM TIGR00033 aroC: chorismate synthase 2 364 6.2E-126 T 25-04-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLFO_RS02295 46f6bc94473fad768894a56a019bc8eb 378 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 25-04-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLFO_RS02295 46f6bc94473fad768894a56a019bc8eb 378 Pfam PF01264 Chorismate synthase 2 359 2.0E-121 T 25-04-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLFO_RS02295 46f6bc94473fad768894a56a019bc8eb 378 PIRSF PIRSF001456 1 376 8.8E-128 T 25-04-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLFO_RS02295 46f6bc94473fad768894a56a019bc8eb 378 Hamap MF_00300 Chorismate synthase [aroC]. 2 366 35.472 T 25-04-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLFO_RS02295 46f6bc94473fad768894a56a019bc8eb 378 Gene3D G3DSA:3.60.150.10 1 376 1.1E-148 T 25-04-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLFO_RS02295 46f6bc94473fad768894a56a019bc8eb 378 ProSitePatterns PS00788 Chorismate synthase signature 2. 127 143 - T 25-04-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLFO_RS02295 46f6bc94473fad768894a56a019bc8eb 378 SUPERFAMILY SSF103263 1 376 7.33E-141 T 25-04-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CLFO_RS06570 8f98559048f006f28891e6164b97bfc1 306 SUPERFAMILY SSF53335 6 38 3.65E-55 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS06570 8f98559048f006f28891e6164b97bfc1 306 SUPERFAMILY SSF53335 70 303 3.65E-55 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS06570 8f98559048f006f28891e6164b97bfc1 306 Gene3D G3DSA:3.40.50.150 99 283 3.1E-14 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS06570 8f98559048f006f28891e6164b97bfc1 306 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 8 286 2.2E-49 T 25-04-2017 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 CLFO_RS06570 8f98559048f006f28891e6164b97bfc1 306 Pfam PF04072 Leucine carboxyl methyltransferase 10 208 7.5E-40 T 25-04-2017 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 CLFO_RS16630 efe7a2f80956b9489550d5e4434374ed 775 Gene3D G3DSA:3.30.365.10 179 284 2.1E-26 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS16630 efe7a2f80956b9489550d5e4434374ed 775 Gene3D G3DSA:3.30.365.10 454 591 1.4E-34 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS16630 efe7a2f80956b9489550d5e4434374ed 775 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 19 122 4.4E-28 T 25-04-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLFO_RS16630 efe7a2f80956b9489550d5e4434374ed 775 Gene3D G3DSA:3.90.1170.50 5 110 1.6E-41 T 25-04-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLFO_RS16630 efe7a2f80956b9489550d5e4434374ed 775 Gene3D G3DSA:3.30.365.10 287 361 1.4E-33 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS16630 efe7a2f80956b9489550d5e4434374ed 775 Gene3D G3DSA:3.30.365.10 111 178 1.4E-33 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS16630 efe7a2f80956b9489550d5e4434374ed 775 SMART SM01008 19 122 1.9E-46 T 25-04-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLFO_RS16630 efe7a2f80956b9489550d5e4434374ed 775 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 152 710 3.3E-137 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS16630 efe7a2f80956b9489550d5e4434374ed 775 SUPERFAMILY SSF56003 114 768 1.31E-159 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS16630 efe7a2f80956b9489550d5e4434374ed 775 Gene3D G3DSA:3.30.365.10 625 768 6.0E-49 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS16630 efe7a2f80956b9489550d5e4434374ed 775 Gene3D G3DSA:3.30.365.10 363 453 6.0E-49 T 25-04-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CLFO_RS16630 efe7a2f80956b9489550d5e4434374ed 775 SUPERFAMILY SSF54665 4 142 3.66E-42 T 25-04-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLFO_RS09000 8715d7a46642cde62b0f3f31fab7c6ce 206 SUPERFAMILY SSF56281 1 205 2.23E-60 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS09000 8715d7a46642cde62b0f3f31fab7c6ce 206 Gene3D G3DSA:3.60.15.10 11 205 2.0E-63 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS09000 8715d7a46642cde62b0f3f31fab7c6ce 206 SMART SM00849 12 189 2.2E-49 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS09000 8715d7a46642cde62b0f3f31fab7c6ce 206 Pfam PF00753 Metallo-beta-lactamase superfamily 9 189 8.9E-35 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS11490 6ff33e78f87aa61685c2acce7cfd8b0f 262 Pfam PF01479 S4 domain 187 232 1.2E-8 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS11490 6ff33e78f87aa61685c2acce7cfd8b0f 262 SMART SM00363 186 247 5.4E-11 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS11490 6ff33e78f87aa61685c2acce7cfd8b0f 262 Gene3D G3DSA:3.10.290.10 185 240 3.1E-15 T 25-04-2017 IPR002942 RNA-binding S4 domain GO:0003723 CLFO_RS11490 6ff33e78f87aa61685c2acce7cfd8b0f 262 SUPERFAMILY SSF55174 183 256 1.44E-27 T 25-04-2017 CLFO_RS11490 6ff33e78f87aa61685c2acce7cfd8b0f 262 SUPERFAMILY SSF55174 65 131 1.44E-27 T 25-04-2017 CLFO_RS05820 276e2f9be0c7fa7d2a8dc681a61d87ac 128 Pfam PF00699 Urease beta subunit 4 99 6.8E-41 T 25-04-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05820 276e2f9be0c7fa7d2a8dc681a61d87ac 128 Gene3D G3DSA:2.10.150.10 1 126 2.3E-49 T 25-04-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05820 276e2f9be0c7fa7d2a8dc681a61d87ac 128 SUPERFAMILY SSF51278 1 125 5.36E-45 T 25-04-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05820 276e2f9be0c7fa7d2a8dc681a61d87ac 128 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 101 2.3E-42 T 25-04-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS05820 276e2f9be0c7fa7d2a8dc681a61d87ac 128 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 28.505 T 25-04-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CLFO_RS15800 8b4015d1a62d138e2fc6c2b8d5499e58 239 Pfam PF02348 Cytidylyltransferase 6 218 1.4E-21 T 25-04-2017 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CLFO_RS15800 8b4015d1a62d138e2fc6c2b8d5499e58 239 Gene3D G3DSA:3.90.550.10 1 230 4.9E-60 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS15800 8b4015d1a62d138e2fc6c2b8d5499e58 239 SUPERFAMILY SSF53448 1 231 8.96E-46 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS11975 c97e78fcc255ff985d7fea5d192ca585 1187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 245 261 2.8E-12 T 25-04-2017 CLFO_RS11975 c97e78fcc255ff985d7fea5d192ca585 1187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 311 325 2.8E-12 T 25-04-2017 CLFO_RS11975 c97e78fcc255ff985d7fea5d192ca585 1187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 492 504 2.8E-12 T 25-04-2017 CLFO_RS11975 c97e78fcc255ff985d7fea5d192ca585 1187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 525 549 2.8E-12 T 25-04-2017 CLFO_RS11975 c97e78fcc255ff985d7fea5d192ca585 1187 Pfam PF02384 N-6 DNA Methylase 480 619 3.1E-8 T 25-04-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CLFO_RS11975 c97e78fcc255ff985d7fea5d192ca585 1187 SUPERFAMILY SSF53335 65 264 1.51E-63 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11975 c97e78fcc255ff985d7fea5d192ca585 1187 SUPERFAMILY SSF53335 484 658 1.51E-63 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11975 c97e78fcc255ff985d7fea5d192ca585 1187 SUPERFAMILY SSF53335 307 388 1.51E-63 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11975 c97e78fcc255ff985d7fea5d192ca585 1187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 495 501 - T 25-04-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CLFO_RS11975 c97e78fcc255ff985d7fea5d192ca585 1187 Gene3D G3DSA:3.40.50.150 247 264 1.6E-44 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11975 c97e78fcc255ff985d7fea5d192ca585 1187 Gene3D G3DSA:3.40.50.150 484 620 1.6E-44 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS11975 c97e78fcc255ff985d7fea5d192ca585 1187 Gene3D G3DSA:3.40.50.150 307 392 1.6E-44 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS01150 5715bd6c11b45d16b8c48cdb5fcd9c16 178 SUPERFAMILY SSF51161 30 171 4.02E-34 T 25-04-2017 IPR011004 Trimeric LpxA-like CLFO_RS01150 5715bd6c11b45d16b8c48cdb5fcd9c16 178 Gene3D G3DSA:2.160.10.10 29 171 2.5E-39 T 25-04-2017 CLFO_RS01150 5715bd6c11b45d16b8c48cdb5fcd9c16 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 66 101 5.3E-6 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS01150 5715bd6c11b45d16b8c48cdb5fcd9c16 178 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 120 155 9.9E-5 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS07270 30fa78b255394e6a8bd81641a42edc55 521 Pfam PF00239 Resolvase, N terminal domain 5 146 5.6E-33 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS07270 30fa78b255394e6a8bd81641a42edc55 521 Pfam PF13408 Recombinase zinc beta ribbon domain 290 339 1.2E-8 T 25-04-2017 IPR025827 Recombinase zinc beta ribbon domain CLFO_RS07270 30fa78b255394e6a8bd81641a42edc55 521 Gene3D G3DSA:3.40.50.1390 4 130 3.8E-27 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS07270 30fa78b255394e6a8bd81641a42edc55 521 SUPERFAMILY SSF53041 5 146 1.7E-30 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS07270 30fa78b255394e6a8bd81641a42edc55 521 SMART SM00857 4 149 7.1E-46 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS07270 30fa78b255394e6a8bd81641a42edc55 521 Pfam PF07508 Recombinase 170 276 4.2E-23 T 25-04-2017 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CLFO_RS20780 da95e50e408e985190757b5af141461d 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 372 392 3.1E-11 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS20780 da95e50e408e985190757b5af141461d 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 3.1E-11 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS20780 da95e50e408e985190757b5af141461d 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 297 316 3.1E-11 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS20780 da95e50e408e985190757b5af141461d 437 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 3.1E-11 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS20780 da95e50e408e985190757b5af141461d 437 SUPERFAMILY SSF161070 4 433 3.66E-123 T 25-04-2017 CLFO_RS20780 da95e50e408e985190757b5af141461d 437 Pfam PF00209 Sodium:neurotransmitter symporter family 4 124 3.7E-21 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS20780 da95e50e408e985190757b5af141461d 437 Pfam PF00209 Sodium:neurotransmitter symporter family 146 432 1.6E-33 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS14560 631274d0ae70336ec5b7e4bb3f8aa152 322 Pfam PF03812 2-keto-3-deoxygluconate permease 2 307 8.9E-119 T 25-04-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLFO_RS14560 631274d0ae70336ec5b7e4bb3f8aa152 322 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 13 306 3.0E-51 T 25-04-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CLFO_RS07960 7e895f2e2c71338bd8ac0d2272d8731b 136 Pfam PF13782 Stage V sporulation protein AB 25 133 1.4E-31 T 25-04-2017 IPR020144 Stage V sporulation protein AB CLFO_RS07960 7e895f2e2c71338bd8ac0d2272d8731b 136 ProDom PD086170 SPORULATION AB V STAGE MEMBRANE SPOVAB TRANSMEMBRANE 10 133 8.0E-44 T 25-04-2017 IPR020144 Stage V sporulation protein AB CLFO_RS18490 26d8b8d2a6323291842bd06a372fc497 460 Pfam PF12176 Methanol-cobalamin methyltransferase B subunit 4 459 4.6E-185 T 25-04-2017 IPR021079 Methanol-cobalamin methyltransferase, B subunit KEGG: 00680+2.1.1.90 CLFO_RS00325 ce724dfec99f07b60b5676718e1522f0 206 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 6 201 1.3E-59 T 25-04-2017 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 CLFO_RS00325 ce724dfec99f07b60b5676718e1522f0 206 Gene3D G3DSA:3.30.950.10 107 203 1.0E-22 T 25-04-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00325 ce724dfec99f07b60b5676718e1522f0 206 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 189 2.4E-22 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00325 ce724dfec99f07b60b5676718e1522f0 206 SUPERFAMILY SSF53790 3 203 1.6E-39 T 25-04-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS00325 ce724dfec99f07b60b5676718e1522f0 206 Gene3D G3DSA:3.40.1010.10 1 106 6.3E-26 T 25-04-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CLFO_RS07520 95aa34fcc0bd4bb9a3420e7e6e12d25c 412 Gene3D G3DSA:3.90.540.10 293 365 4.6E-4 T 25-04-2017 IPR024622 Colicin/pyocin, DNase domain GO:0004519 CLFO_RS07520 95aa34fcc0bd4bb9a3420e7e6e12d25c 412 SMART SM00507 308 359 3.3E-10 T 25-04-2017 IPR003615 HNH nuclease CLFO_RS07520 95aa34fcc0bd4bb9a3420e7e6e12d25c 412 Pfam PF01844 HNH endonuclease 321 363 2.1E-12 T 25-04-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CLFO_RS06290 2a08d41fd01bffb709a3d71a11daf8cd 197 SUPERFAMILY SSF53448 1 185 6.72E-30 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS06290 2a08d41fd01bffb709a3d71a11daf8cd 197 Pfam PF12804 MobA-like NTP transferase domain 4 160 8.2E-39 T 25-04-2017 IPR025877 MobA-like NTP transferase CLFO_RS06290 2a08d41fd01bffb709a3d71a11daf8cd 197 TIGRFAM TIGR03310 matur_MocA_YgfJ: molybdenum cofactor cytidylyltransferase 3 187 1.4E-64 T 25-04-2017 IPR017696 Molybdenum cofactor cytidylyltransferase MetaCyc: PWY-6476 CLFO_RS06290 2a08d41fd01bffb709a3d71a11daf8cd 197 Gene3D G3DSA:3.90.550.10 1 189 1.7E-34 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS20360 a118ca9ebbd39135ed5c697ae6b8c50a 424 Pfam PF09861 Domain of unknown function (DUF2088) 8 213 5.4E-74 T 25-04-2017 IPR018657 Domain of unknown function DUF2088 CLFO_RS19680 412df8b2a92e155d8a36246c969656e2 116 SUPERFAMILY SSF54843 6 116 1.28E-44 T 25-04-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19680 412df8b2a92e155d8a36246c969656e2 116 Pfam PF00237 Ribosomal protein L22p/L17e 14 114 3.5E-34 T 25-04-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19680 412df8b2a92e155d8a36246c969656e2 116 ProSitePatterns PS00464 Ribosomal protein L22 signature. 89 113 - T 25-04-2017 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CLFO_RS19680 412df8b2a92e155d8a36246c969656e2 116 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 7 116 30.508 T 25-04-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS19680 412df8b2a92e155d8a36246c969656e2 116 Gene3D G3DSA:3.90.470.10 7 116 2.7E-44 T 25-04-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CLFO_RS19680 412df8b2a92e155d8a36246c969656e2 116 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 11 112 1.9E-48 T 25-04-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CLFO_RS15285 09d7aba1fa7cb6ba8e636df0b66113e3 253 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 250 1.6E-60 T 25-04-2017 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CLFO_RS15285 09d7aba1fa7cb6ba8e636df0b66113e3 253 SUPERFAMILY SSF53067 2 249 5.19E-39 T 25-04-2017 CLFO_RS15285 09d7aba1fa7cb6ba8e636df0b66113e3 253 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 2 250 4.0E-85 T 25-04-2017 IPR008275 CoA enzyme activase CLFO_RS15285 09d7aba1fa7cb6ba8e636df0b66113e3 253 Gene3D G3DSA:3.30.420.40 95 233 7.7E-51 T 25-04-2017 CLFO_RS00795 38cc3a4eea283bffebc7531780b26784 491 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 129 288 7.6E-14 T 25-04-2017 CLFO_RS18675 07027dd5080115f7f7ed4bb5ac91be89 261 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 9 257 1.2E-57 T 25-04-2017 IPR005226 UPF0014 family CLFO_RS18675 07027dd5080115f7f7ed4bb5ac91be89 261 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 251 4.1E-87 T 25-04-2017 IPR005226 UPF0014 family CLFO_RS14860 a07ff4987e5e37014fba609df1ad3f1c 239 SUPERFAMILY SSF53795 81 158 2.23E-9 T 25-04-2017 CLFO_RS14860 a07ff4987e5e37014fba609df1ad3f1c 239 Gene3D G3DSA:3.40.50.300 80 163 3.7E-9 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11350 78297b7e399d1aca99fada9d387536f8 118 Pfam PF03780 Asp23 family, cell envelope-related function 10 115 7.1E-34 T 25-04-2017 IPR005531 Alkaline shock protein Asp23 CLFO_RS18305 6415ad00980a6dfa5075509819684223 117 Gene3D G3DSA:3.30.70.120 9 115 2.4E-4 T 25-04-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLFO_RS18305 6415ad00980a6dfa5075509819684223 117 SUPERFAMILY SSF54913 5 115 6.99E-9 T 25-04-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLFO_RS21170 e3adc2d1e328d7c314e2f02717eb359e 576 Pfam PF06527 TniQ 3 158 1.0E-16 T 25-04-2017 IPR009492 TniQ CLFO_RS21170 e3adc2d1e328d7c314e2f02717eb359e 576 Pfam PF15978 Tn7-like transposition protein D 328 505 1.9E-35 T 25-04-2017 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl CLFO_RS21170 e3adc2d1e328d7c314e2f02717eb359e 576 Pfam PF15978 Tn7-like transposition protein D 201 308 2.5E-23 T 25-04-2017 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl CLFO_RS07100 782ae37a70e8bc14a27f1011ce2c5d72 535 Pfam PF00174 Oxidoreductase molybdopterin binding domain 208 336 1.3E-8 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS07100 782ae37a70e8bc14a27f1011ce2c5d72 535 Pfam PF04205 FMN-binding domain 88 176 8.2E-14 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS07100 782ae37a70e8bc14a27f1011ce2c5d72 535 SMART SM00900 88 179 6.0E-15 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS07100 782ae37a70e8bc14a27f1011ce2c5d72 535 Gene3D G3DSA:3.90.420.10 208 336 7.7E-12 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS07100 782ae37a70e8bc14a27f1011ce2c5d72 535 SUPERFAMILY SSF56524 207 336 4.19E-17 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS10730 ba6ac50197cec162aceaaa460cfc2528 155 Gene3D G3DSA:3.40.630.30 5 127 6.6E-10 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS10730 ba6ac50197cec162aceaaa460cfc2528 155 Pfam PF00583 Acetyltransferase (GNAT) family 39 89 1.6E-4 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS10730 ba6ac50197cec162aceaaa460cfc2528 155 SUPERFAMILY SSF55729 1 91 9.78E-13 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS11540 cab775620deb00b126d7ec39548bd68c 235 Pfam PF04970 Lecithin retinol acyltransferase 3 131 3.6E-17 T 25-04-2017 IPR007053 LRAT-like domain CLFO_RS04000 55cd18a67676d19ff4cb8079963499b7 70 SMART SM00530 6 62 1.1E-6 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS04000 55cd18a67676d19ff4cb8079963499b7 70 SUPERFAMILY SSF47413 2 68 2.42E-18 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS04000 55cd18a67676d19ff4cb8079963499b7 70 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 3.1E-24 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS04000 55cd18a67676d19ff4cb8079963499b7 70 Gene3D G3DSA:1.10.260.40 1 69 1.1E-17 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS05480 17378c23a88379c2288fea0f99782ffd 201 Pfam PF04286 Protein of unknown function (DUF445) 12 141 7.7E-21 T 25-04-2017 IPR007383 Protein of unknown function DUF445 CLFO_RS05480 17378c23a88379c2288fea0f99782ffd 201 Pfam PF04286 Protein of unknown function (DUF445) 132 200 5.4E-15 T 25-04-2017 IPR007383 Protein of unknown function DUF445 CLFO_RS17925 5e9a1caa19d1ac1cecd9b521c12fefe7 683 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 305 329 2.4E-8 T 25-04-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17925 5e9a1caa19d1ac1cecd9b521c12fefe7 683 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 2.4E-8 T 25-04-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17925 5e9a1caa19d1ac1cecd9b521c12fefe7 683 Pfam PF00361 Proton-conducting membrane transporter 199 495 1.0E-58 T 25-04-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17925 5e9a1caa19d1ac1cecd9b521c12fefe7 683 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 142 187 9.5E-7 T 25-04-2017 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS09685 552039b99a384c4343219d74b480dd77 196 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 19 196 5.4E-48 T 25-04-2017 IPR014195 Sporulation stage III, protein AG CLFO_RS15635 23a2ea3e073419fed3818648976b87e0 117 SUPERFAMILY SSF47226 5 107 4.71E-12 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS15635 23a2ea3e073419fed3818648976b87e0 117 Pfam PF01627 Hpt domain 23 82 5.5E-5 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS15635 23a2ea3e073419fed3818648976b87e0 117 Gene3D G3DSA:1.20.120.160 13 108 2.8E-11 T 25-04-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CLFO_RS14445 dc9e5c08f1f0e0aa836132b5104f1510 391 Gene3D G3DSA:3.40.50.1970 4 193 4.6E-55 T 25-04-2017 CLFO_RS14445 dc9e5c08f1f0e0aa836132b5104f1510 391 SUPERFAMILY SSF56796 4 390 4.84E-118 T 25-04-2017 CLFO_RS14445 dc9e5c08f1f0e0aa836132b5104f1510 391 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 383 1.8E-111 T 25-04-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CLFO_RS14445 dc9e5c08f1f0e0aa836132b5104f1510 391 Gene3D G3DSA:1.20.1090.10 194 391 2.4E-65 T 25-04-2017 CLFO_RS14800 7fe2122ba6e6c2e499a58d8231a79077 213 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 26 208 1.4E-52 T 25-04-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CLFO_RS14800 7fe2122ba6e6c2e499a58d8231a79077 213 SUPERFAMILY SSF53335 33 208 2.26E-25 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS14800 7fe2122ba6e6c2e499a58d8231a79077 213 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 212 26.659 T 25-04-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CLFO_RS14800 7fe2122ba6e6c2e499a58d8231a79077 213 Gene3D G3DSA:3.40.50.150 17 201 6.3E-11 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS14800 7fe2122ba6e6c2e499a58d8231a79077 213 Pfam PF02390 Putative methyltransferase 38 207 9.1E-44 T 25-04-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CLFO_RS14080 9dced0ec139b40e0b5a92c21ba3903d5 165 Pfam PF11208 Protein of unknown function (DUF2992) 33 165 2.1E-49 T 25-04-2017 IPR016787 Uncharacterised conserved protein UCP021328 CLFO_RS14080 9dced0ec139b40e0b5a92c21ba3903d5 165 PIRSF PIRSF021328 28 165 5.7E-46 T 25-04-2017 IPR016787 Uncharacterised conserved protein UCP021328 CLFO_RS20180 192dea314ab1abb9f3093386ff24fd64 469 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 5 458 5.0E-160 T 25-04-2017 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 CLFO_RS20180 192dea314ab1abb9f3093386ff24fd64 469 Pfam PF03553 Na+/H+ antiporter family 160 453 7.8E-64 T 25-04-2017 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CLFO_RS14945 a39977ddccd574caefaa5935f48cb20d 175 Hamap MF_01515 UPF0316 protein . 1 169 27.89 T 25-04-2017 IPR022930 Protein of unknown function UPF0316 CLFO_RS14945 a39977ddccd574caefaa5935f48cb20d 175 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 109 161 3.7E-8 T 25-04-2017 IPR019264 Domain of unknown function DUF2179 CLFO_RS16280 b5fe9b762bf748d73d242bedf94ac7af 739 Pfam PF07242 Protein of unknown function (DUF1430) 632 738 1.5E-6 T 25-04-2017 IPR006541 Bacteriocin-associated integral membrane protein CLFO_RS12625 9d9a60d2140c2e09351a22bde444b7a4 64 SUPERFAMILY SSF52172 1 50 1.27E-8 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS12625 9d9a60d2140c2e09351a22bde444b7a4 64 Pfam PF00072 Response regulator receiver domain 3 50 1.3E-4 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS12625 9d9a60d2140c2e09351a22bde444b7a4 64 Gene3D G3DSA:3.40.50.2300 1 50 3.9E-8 T 25-04-2017 CLFO_RS08835 640473ac93b8eca78237d37dea6419d6 242 Pfam PF05709 Phage tail protein 21 242 3.1E-25 T 25-04-2017 IPR008841 Siphovirus-type tail component CLFO_RS08835 640473ac93b8eca78237d37dea6419d6 242 TIGRFAM TIGR01633 phi3626_gp14_N: putative phage tail component, N-terminal domain 3 123 3.2E-13 T 25-04-2017 IPR006520 Streptococcus phage 7201, Orf34, N-terminal CLFO_RS16050 070fa81e1889a9a3b8ab0d2cfeb5973a 115 Pfam PF07883 Cupin domain 44 110 3.1E-11 T 25-04-2017 IPR013096 Cupin 2, conserved barrel CLFO_RS16050 070fa81e1889a9a3b8ab0d2cfeb5973a 115 Gene3D G3DSA:2.60.120.10 5 113 2.8E-39 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS16050 070fa81e1889a9a3b8ab0d2cfeb5973a 115 SUPERFAMILY SSF51182 7 111 1.07E-25 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS15165 9c07ee1766aa2d4b78031f8f370f7080 518 PIRSF PIRSF005690 26 518 5.6E-174 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS15165 9c07ee1766aa2d4b78031f8f370f7080 518 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 40 507 3.9E-179 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS10725 27925f0a434d77250b610c39945d8181 187 Gene3D G3DSA:3.40.50.150 15 163 3.3E-21 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10725 27925f0a434d77250b610c39945d8181 187 SUPERFAMILY SSF53335 16 160 4.22E-25 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10725 27925f0a434d77250b610c39945d8181 187 Pfam PF06962 Putative rRNA methylase 46 185 5.9E-53 T 25-04-2017 IPR010719 Putative rRNA methylase CLFO_RS20450 cf4772c96fd64ecfe1391644887bcc8a 225 Gene3D G3DSA:3.40.50.720 2 223 3.7E-55 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS20450 cf4772c96fd64ecfe1391644887bcc8a 225 SUPERFAMILY SSF69572 2 220 2.09E-64 T 25-04-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLFO_RS20450 cf4772c96fd64ecfe1391644887bcc8a 225 Pfam PF00899 ThiF family 4 224 6.2E-49 T 25-04-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLFO_RS13815 e377b56640d6799c6d1bf1bedcd1a40c 354 Pfam PF13478 XdhC Rossmann domain 91 233 4.5E-41 T 25-04-2017 IPR027051 XdhC Rossmann domain CLFO_RS13815 e377b56640d6799c6d1bf1bedcd1a40c 354 Gene3D G3DSA:3.50.50.60 88 168 6.9E-5 T 25-04-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CLFO_RS13815 e377b56640d6799c6d1bf1bedcd1a40c 354 Pfam PF02625 XdhC and CoxI family 268 328 5.5E-17 T 25-04-2017 IPR003777 XdhC- CoxI CLFO_RS18475 be82bf60e7e5962264a8050d2667589f 585 SUPERFAMILY SSF54292 9 88 1.27E-17 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS18475 be82bf60e7e5962264a8050d2667589f 585 Gene3D G3DSA:3.10.20.30 2 87 2.1E-18 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS18475 be82bf60e7e5962264a8050d2667589f 585 Pfam PF14574 Domain of unknown function (DUF4445) 189 583 4.9E-128 T 25-04-2017 IPR027980 Protein of unknown function DUF4445 CLFO_RS18475 be82bf60e7e5962264a8050d2667589f 585 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 80 1.5E-10 T 25-04-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CLFO_RS01480 d598679eb85886f9ce2a9c8e34e059b1 250 Pfam PF02348 Cytidylyltransferase 11 215 7.7E-34 T 25-04-2017 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CLFO_RS01480 d598679eb85886f9ce2a9c8e34e059b1 250 SUPERFAMILY SSF53448 9 212 2.45E-30 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS01480 d598679eb85886f9ce2a9c8e34e059b1 250 Gene3D G3DSA:3.90.550.10 9 215 8.4E-32 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS09690 c4989a5b00a05755f3d25675547d11f5 256 Pfam PF12685 SpoIIIAH-like protein 8 252 1.8E-46 T 25-04-2017 IPR024232 Stage III sporulation protein AH-like CLFO_RS11440 a6b49e636c04ce4c320c7706063c2e8a 293 Pfam PF03755 YicC-like family, N-terminal region 2 156 2.6E-44 T 25-04-2017 IPR013527 YicC-like, N-terminal CLFO_RS11440 a6b49e636c04ce4c320c7706063c2e8a 293 Pfam PF08340 Domain of unknown function (DUF1732) 210 293 2.7E-36 T 25-04-2017 IPR013551 Domain of unknown function DUF1732 CLFO_RS11440 a6b49e636c04ce4c320c7706063c2e8a 293 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 293 2.9E-79 T 25-04-2017 IPR005229 Conserved hypothetical protein CHP00255 CLFO_RS02890 fe42903d7d7091a7a03080f9d5fc7a7b 267 SUPERFAMILY SSF52402 18 219 1.1E-36 T 25-04-2017 CLFO_RS02890 fe42903d7d7091a7a03080f9d5fc7a7b 267 Gene3D G3DSA:3.40.50.620 17 170 4.7E-29 T 25-04-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLFO_RS02890 fe42903d7d7091a7a03080f9d5fc7a7b 267 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 6 260 3.6E-80 T 25-04-2017 IPR005232 Conserved hypothetical protein CHP00268 CLFO_RS02890 fe42903d7d7091a7a03080f9d5fc7a7b 267 Pfam PF02540 NAD synthase 17 83 4.8E-6 T 25-04-2017 IPR022310 NAD/GMP synthase CLFO_RS02890 fe42903d7d7091a7a03080f9d5fc7a7b 267 PIRSF PIRSF006661 1 267 2.5E-100 T 25-04-2017 IPR005232 Conserved hypothetical protein CHP00268 CLFO_RS13240 6fb20bfb23af49006669454390297e77 209 SUPERFAMILY SSF53335 4 192 1.82E-31 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS13240 6fb20bfb23af49006669454390297e77 209 Pfam PF08241 Methyltransferase domain 36 131 9.5E-22 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS13240 6fb20bfb23af49006669454390297e77 209 Gene3D G3DSA:3.40.50.150 4 136 5.6E-33 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS13240 6fb20bfb23af49006669454390297e77 209 Gene3D G3DSA:3.40.50.150 168 202 5.6E-33 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS08880 fd1476f6bce901026e0ee0bdd2c00364 150 Pfam PF01327 Polypeptide deformylase 4 146 1.8E-44 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS08880 fd1476f6bce901026e0ee0bdd2c00364 150 Gene3D G3DSA:3.90.45.10 1 145 5.7E-50 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS08880 fd1476f6bce901026e0ee0bdd2c00364 150 PIRSF PIRSF004749 1 148 5.0E-45 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS08880 fd1476f6bce901026e0ee0bdd2c00364 150 Hamap MF_00163 Peptide deformylase [def]. 2 149 26.08 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS08880 fd1476f6bce901026e0ee0bdd2c00364 150 PRINTS PR01576 Peptide deformylase signature 118 147 3.6E-27 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS08880 fd1476f6bce901026e0ee0bdd2c00364 150 PRINTS PR01576 Peptide deformylase signature 34 63 3.6E-27 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS08880 fd1476f6bce901026e0ee0bdd2c00364 150 PRINTS PR01576 Peptide deformylase signature 87 98 3.6E-27 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS08880 fd1476f6bce901026e0ee0bdd2c00364 150 PRINTS PR01576 Peptide deformylase signature 99 117 3.6E-27 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS08880 fd1476f6bce901026e0ee0bdd2c00364 150 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 10 146 1.9E-43 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS08880 fd1476f6bce901026e0ee0bdd2c00364 150 SUPERFAMILY SSF56420 3 147 1.57E-50 T 25-04-2017 IPR023635 Peptide deformylase CLFO_RS12845 c1b1734fc110fed28b85d0e5c73a9ac3 436 Pfam PF09861 Domain of unknown function (DUF2088) 35 185 4.6E-16 T 25-04-2017 IPR018657 Domain of unknown function DUF2088 CLFO_RS20185 6f603c1c7733a29958e53b25864062cc 205 SMART SM00900 41 115 4.5E-18 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS20185 6f603c1c7733a29958e53b25864062cc 205 SMART SM00900 130 204 3.8E-15 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS20185 6f603c1c7733a29958e53b25864062cc 205 Pfam PF04205 FMN-binding domain 130 201 2.7E-15 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS20185 6f603c1c7733a29958e53b25864062cc 205 Pfam PF04205 FMN-binding domain 41 112 3.5E-16 T 25-04-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 CLFO_RS13295 a13597b51eb133c853f83abd38f3ee26 212 Pfam PF08241 Methyltransferase domain 42 134 5.6E-15 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS13295 a13597b51eb133c853f83abd38f3ee26 212 Gene3D G3DSA:3.40.50.150 28 205 7.3E-27 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS13295 a13597b51eb133c853f83abd38f3ee26 212 SUPERFAMILY SSF53335 3 201 4.67E-35 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10630 91ce32e66f7f4e627d3396305826d5e3 292 Gene3D G3DSA:1.10.10.10 233 282 8.9E-4 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03540 3c6579a4a0ba6f15841b3a8258ccfa31 193 Gene3D G3DSA:3.40.50.1220 43 186 2.6E-11 T 25-04-2017 IPR029035 DHS-like NAD/FAD-binding domain CLFO_RS03540 3c6579a4a0ba6f15841b3a8258ccfa31 193 Pfam PF02552 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit 27 184 9.5E-46 T 25-04-2017 IPR003704 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit GO:0019385 CLFO_RS03540 3c6579a4a0ba6f15841b3a8258ccfa31 193 SUPERFAMILY SSF52467 44 174 1.15E-14 T 25-04-2017 IPR029035 DHS-like NAD/FAD-binding domain CLFO_RS16100 a1dc24312b3228e2f1940eb4387f9ed3 352 Gene3D G3DSA:3.40.640.10 38 253 8.2E-63 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS16100 a1dc24312b3228e2f1940eb4387f9ed3 352 Pfam PF00155 Aminotransferase class I and II 25 346 6.6E-55 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS16100 a1dc24312b3228e2f1940eb4387f9ed3 352 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 351 55.866 T 25-04-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CLFO_RS16100 a1dc24312b3228e2f1940eb4387f9ed3 352 SUPERFAMILY SSF53383 5 350 7.23E-75 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS16100 a1dc24312b3228e2f1940eb4387f9ed3 352 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 350 4.7E-96 T 25-04-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CLFO_RS16100 a1dc24312b3228e2f1940eb4387f9ed3 352 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 25-04-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CLFO_RS16100 a1dc24312b3228e2f1940eb4387f9ed3 352 Gene3D G3DSA:3.90.1150.10 254 352 6.5E-27 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS20470 21e93a6342c7f418f6730f3d9c82959e 196 Pfam PF02581 Thiamine monophosphate synthase/TENI 2 178 5.7E-48 T 25-04-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS20470 21e93a6342c7f418f6730f3d9c82959e 196 Gene3D G3DSA:3.20.20.70 2 195 2.0E-59 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS20470 21e93a6342c7f418f6730f3d9c82959e 196 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 1 196 18.985 T 25-04-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS20470 21e93a6342c7f418f6730f3d9c82959e 196 SUPERFAMILY SSF51391 2 194 4.58E-50 T 25-04-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CLFO_RS13440 cb12286f3c1ce18e8fec38e66beefbfe 435 Gene3D G3DSA:2.60.40.1630 94 175 9.4E-5 T 25-04-2017 CLFO_RS13440 cb12286f3c1ce18e8fec38e66beefbfe 435 Pfam PF13786 Domain of unknown function (DUF4179) 41 127 1.9E-9 T 25-04-2017 IPR025436 Domain of unknown function DUF4179 CLFO_RS09755 450d0a4c8a4c991908c550b77c071ae0 572 SUPERFAMILY SSF52540 292 320 2.42E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09755 450d0a4c8a4c991908c550b77c071ae0 572 SUPERFAMILY SSF52540 349 518 2.42E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09755 450d0a4c8a4c991908c550b77c071ae0 572 SUPERFAMILY SSF52540 1 203 2.42E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09755 450d0a4c8a4c991908c550b77c071ae0 572 Gene3D G3DSA:3.40.50.300 1 210 1.4E-61 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09755 450d0a4c8a4c991908c550b77c071ae0 572 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 560 6.4E-173 T 25-04-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CLFO_RS09755 450d0a4c8a4c991908c550b77c071ae0 572 Gene3D G3DSA:3.40.50.300 441 517 1.4E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09755 450d0a4c8a4c991908c550b77c071ae0 572 Gene3D G3DSA:3.40.50.300 381 404 1.4E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09755 450d0a4c8a4c991908c550b77c071ae0 572 PIRSF PIRSF003128 1 566 6.0E-183 T 25-04-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CLFO_RS09755 450d0a4c8a4c991908c550b77c071ae0 572 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 519 1.8E-20 T 25-04-2017 IPR003395 RecF/RecN/SMC, N-terminal CLFO_RS02640 83c6438344ef81a98ce1d003841bb23e 203 SUPERFAMILY SSF53335 6 170 1.22E-28 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS02640 83c6438344ef81a98ce1d003841bb23e 203 Gene3D G3DSA:3.40.50.150 15 177 1.2E-28 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS02640 83c6438344ef81a98ce1d003841bb23e 203 Pfam PF13847 Methyltransferase domain 36 156 1.6E-16 T 25-04-2017 IPR025714 Methyltransferase domain CLFO_RS20280 695a6943b33abe13ba603df4009a6b04 141 Pfam PF04657 Putative inner membrane exporter, YdcZ 6 137 4.8E-32 T 25-04-2017 IPR006750 Putative inner membrane exporter, YdcZ CLFO_RS03855 b97d68dbc9d4279cf0518df661690da2 537 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 240 474 1.3E-28 T 25-04-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CLFO_RS03855 b97d68dbc9d4279cf0518df661690da2 537 Gene3D G3DSA:3.40.50.720 8 313 6.4E-76 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03855 b97d68dbc9d4279cf0518df661690da2 537 Gene3D G3DSA:1.10.1040.10 319 536 3.7E-54 T 25-04-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CLFO_RS03855 b97d68dbc9d4279cf0518df661690da2 537 SUPERFAMILY SSF48179 319 536 3.03E-40 T 25-04-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CLFO_RS03855 b97d68dbc9d4279cf0518df661690da2 537 SUPERFAMILY SSF51735 8 313 1.26E-60 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS03855 b97d68dbc9d4279cf0518df661690da2 537 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 38 201 4.0E-16 T 25-04-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CLFO_RS17855 b8c766a7a2c058d3dd855e0eb832466c 290 PIRSF PIRSF006483 1 290 5.3E-92 T 25-04-2017 IPR003740 Uncharacterised membrane protein YitT CLFO_RS17855 b8c766a7a2c058d3dd855e0eb832466c 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 228 282 8.6E-22 T 25-04-2017 IPR019264 Domain of unknown function DUF2179 CLFO_RS17855 b8c766a7a2c058d3dd855e0eb832466c 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 14 223 6.1E-65 T 25-04-2017 IPR003740 Uncharacterised membrane protein YitT CLFO_RS13750 d9e57ee6a5ab148f9995e44d0f93468a 359 SUPERFAMILY SSF81345 27 353 1.22E-82 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS13750 d9e57ee6a5ab148f9995e44d0f93468a 359 Gene3D G3DSA:1.10.3470.10 29 356 1.8E-106 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS13750 d9e57ee6a5ab148f9995e44d0f93468a 359 Pfam PF01032 FecCD transport family 36 353 1.3E-89 T 25-04-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 67 263 3.3E-87 T 25-04-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 135 149 9.8E-21 T 25-04-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 185 197 9.8E-21 T 25-04-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 123 135 9.8E-21 T 25-04-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 63 72 9.8E-21 T 25-04-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 163 175 9.8E-21 T 25-04-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 253 263 9.8E-21 T 25-04-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 213 234 4.8E-66 T 25-04-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 84 104 4.8E-66 T 25-04-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 104 123 4.8E-66 T 25-04-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 262 4.8E-66 T 25-04-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 192 212 4.8E-66 T 25-04-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 65 84 4.8E-66 T 25-04-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 240 252 - T 25-04-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLFO_RS11050 93b0307f2dee3bc1c4298c87d7cb11fa 264 Pfam PF00813 FliP family 67 259 1.4E-81 T 25-04-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CLFO_RS09260 3db230d993eaba1eaec601117fa1e6bd 179 Gene3D G3DSA:2.30.30.240 94 143 2.2E-4 T 25-04-2017 CLFO_RS09260 3db230d993eaba1eaec601117fa1e6bd 179 SUPERFAMILY SSF50346 93 156 3.92E-7 T 25-04-2017 IPR011033 PRC-barrel-like CLFO_RS16990 4e5019362595c4447a8a4211741a4cc9 549 Pfam PF07508 Recombinase 177 289 7.1E-21 T 25-04-2017 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CLFO_RS16990 4e5019362595c4447a8a4211741a4cc9 549 Pfam PF13408 Recombinase zinc beta ribbon domain 306 373 8.9E-13 T 25-04-2017 IPR025827 Recombinase zinc beta ribbon domain CLFO_RS16990 4e5019362595c4447a8a4211741a4cc9 549 Pfam PF00239 Resolvase, N terminal domain 9 157 3.4E-39 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS16990 4e5019362595c4447a8a4211741a4cc9 549 SMART SM00857 8 157 5.9E-48 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS16990 4e5019362595c4447a8a4211741a4cc9 549 SUPERFAMILY SSF53041 7 157 9.29E-36 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS16990 4e5019362595c4447a8a4211741a4cc9 549 Gene3D G3DSA:3.40.50.1390 7 140 1.0E-32 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS08280 6ea881c2c4608af6324bae5d91b9edc7 119 Pfam PF01925 Sulfite exporter TauE/SafE 9 117 1.3E-23 T 25-04-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 CLFO_RS17930 d7a0b70ea5cc4199024312852d236621 494 Pfam PF00361 Proton-conducting membrane transporter 133 428 6.7E-69 T 25-04-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CLFO_RS17930 d7a0b70ea5cc4199024312852d236621 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 223 244 2.1E-14 T 25-04-2017 CLFO_RS17930 d7a0b70ea5cc4199024312852d236621 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 2.1E-14 T 25-04-2017 CLFO_RS17930 d7a0b70ea5cc4199024312852d236621 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 422 441 2.1E-14 T 25-04-2017 CLFO_RS17930 d7a0b70ea5cc4199024312852d236621 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 78 103 2.1E-14 T 25-04-2017 CLFO_RS17930 d7a0b70ea5cc4199024312852d236621 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 109 129 2.1E-14 T 25-04-2017 CLFO_RS16920 5b639e9c457db87696271dea0b6fb81a 118 Pfam PF13280 WYL domain 24 118 4.0E-10 T 25-04-2017 IPR026881 WYL domain CLFO_RS21275 2d018e1eb2b9851a16659a593971ec7d 198 Pfam PF08849 Putative inner membrane protein (DUF1819) 3 184 1.2E-56 T 25-04-2017 IPR014948 Protein of unknown function DUF1819, putative inner membrane CLFO_RS21275 2d018e1eb2b9851a16659a593971ec7d 198 Gene3D G3DSA:1.10.3540.10 3 196 2.2E-55 T 25-04-2017 IPR023137 DUF1819 domain CLFO_RS01130 97ec9e02d1e9cccc97da05a211be246f 299 SUPERFAMILY SSF51735 2 287 5.86E-34 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01130 97ec9e02d1e9cccc97da05a211be246f 299 Pfam PF13460 NAD(P)H-binding 6 141 1.0E-10 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS01130 97ec9e02d1e9cccc97da05a211be246f 299 Gene3D G3DSA:3.40.50.720 2 287 6.3E-27 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS20070 a0730093a5dc2dc8623dfb84ab3369d3 362 Pfam PF03845 Spore germination protein 19 316 8.9E-24 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS20070 a0730093a5dc2dc8623dfb84ab3369d3 362 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 354 1.2E-57 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS07925 7b27e0cb009cd8128d9408f4462f5728 167 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 144 5.5E-39 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07925 7b27e0cb009cd8128d9408f4462f5728 167 SMART SM00852 6 150 7.3E-33 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07925 7b27e0cb009cd8128d9408f4462f5728 167 SUPERFAMILY SSF53218 3 155 3.8E-50 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07925 7b27e0cb009cd8128d9408f4462f5728 167 Pfam PF00994 Probable molybdopterin binding domain 6 149 5.2E-40 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS07925 7b27e0cb009cd8128d9408f4462f5728 167 Gene3D G3DSA:3.40.980.10 3 156 6.8E-60 T 25-04-2017 IPR001453 MoaB/Mog domain CLFO_RS16490 9a070f96a229547f7b360de006afc5d2 216 PIRSF PIRSF010130 1 216 2.9E-88 T 25-04-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CLFO_RS16490 9a070f96a229547f7b360de006afc5d2 216 Gene3D G3DSA:2.40.40.20 145 172 1.1E-4 T 25-04-2017 CLFO_RS16490 9a070f96a229547f7b360de006afc5d2 216 Pfam PF06130 Phosphate propanoyltransferase 32 111 1.2E-28 T 25-04-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CLFO_RS16490 9a070f96a229547f7b360de006afc5d2 216 Pfam PF06130 Phosphate propanoyltransferase 141 206 1.4E-16 T 25-04-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CLFO_RS14715 8fc0f8aa736709f341344ab30b6dfe4a 431 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 425 3.7E-124 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS14715 8fc0f8aa736709f341344ab30b6dfe4a 431 PIRSF PIRSF006066 1 431 5.7E-127 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS14715 8fc0f8aa736709f341344ab30b6dfe4a 431 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 420 1.5E-102 T 25-04-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLFO_RS08225 879663770bb6591007bd6358f6a21455 174 SUPERFAMILY SSF53041 26 165 1.83E-23 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS08225 879663770bb6591007bd6358f6a21455 174 Pfam PF00239 Resolvase, N terminal domain 28 163 4.0E-21 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS08225 879663770bb6591007bd6358f6a21455 174 ProSitePatterns PS00397 Site-specific recombinases active site. 30 38 - T 25-04-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CLFO_RS08225 879663770bb6591007bd6358f6a21455 174 SMART SM00857 27 159 9.9E-26 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS08225 879663770bb6591007bd6358f6a21455 174 Gene3D G3DSA:3.40.50.1390 27 149 1.9E-22 T 25-04-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CLFO_RS03315 6cc817658c56ed4669a50313085eed5a 238 Pfam PF05949 Bacterial protein of unknown function (DUF881) 90 227 2.3E-33 T 25-04-2017 IPR010273 Protein of unknown function DUF881 CLFO_RS18555 e2decbaf700746307a6671588ccd6353 110 Pfam PF02583 Metal-sensitive transcriptional repressor 30 107 5.2E-27 T 25-04-2017 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CLFO_RS15245 9c803c295dd45c83a0b2b17eff922670 427 Pfam PF02447 GntP family permease 2 241 8.0E-11 T 25-04-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CLFO_RS17120 a3724cfa2adf3b9c4e76c8ac80ddedd5 428 SUPERFAMILY SSF116734 7 221 1.8E-41 T 25-04-2017 CLFO_RS17120 a3724cfa2adf3b9c4e76c8ac80ddedd5 428 SUPERFAMILY SSF116734 213 426 2.45E-39 T 25-04-2017 CLFO_RS17120 a3724cfa2adf3b9c4e76c8ac80ddedd5 428 Pfam PF01420 Type I restriction modification DNA specificity domain 20 202 1.6E-16 T 25-04-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CLFO_RS17120 a3724cfa2adf3b9c4e76c8ac80ddedd5 428 Pfam PF01420 Type I restriction modification DNA specificity domain 222 407 1.8E-19 T 25-04-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CLFO_RS14975 765198aae2d64762a93eff2cfdb354c3 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 268 6.1E-16 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS14975 765198aae2d64762a93eff2cfdb354c3 279 Gene3D G3DSA:1.10.3720.10 58 271 2.5E-15 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS14975 765198aae2d64762a93eff2cfdb354c3 279 SUPERFAMILY SSF161098 59 261 4.06E-24 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS01690 98a4b2cc07c6e8e8b535142317cd1309 148 SUPERFAMILY SSF158397 30 146 1.7E-30 T 25-04-2017 CLFO_RS01690 98a4b2cc07c6e8e8b535142317cd1309 148 Gene3D G3DSA:1.20.120.490 28 146 3.7E-32 T 25-04-2017 IPR024042 Hypothetical protein TM1646-like domain CLFO_RS01690 98a4b2cc07c6e8e8b535142317cd1309 148 Pfam PF03885 Protein of unknown function (DUF327) 13 145 5.2E-36 T 25-04-2017 IPR005585 Protein of unknown function DUF327 CLFO_RS07140 71782ab1c2dd7c249e1792e3a66ad691 144 SUPERFAMILY SSF50800 2 143 3.71E-39 T 25-04-2017 IPR011037 Pyruvate kinase-like, insert domain CLFO_RS07140 71782ab1c2dd7c249e1792e3a66ad691 144 Gene3D G3DSA:2.40.33.20 1 143 1.4E-33 T 25-04-2017 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like CLFO_RS07140 71782ab1c2dd7c249e1792e3a66ad691 144 Pfam PF03473 MOSC domain 36 141 1.9E-5 T 25-04-2017 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CLFO_RS03170 fe7b0eaf443a60eed92cb40de729af77 124 SMART SM00418 5 89 9.3E-24 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS03170 fe7b0eaf443a60eed92cb40de729af77 124 SUPERFAMILY SSF46785 1 79 1.59E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03170 fe7b0eaf443a60eed92cb40de729af77 124 Gene3D G3DSA:1.10.10.10 3 75 1.3E-26 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS03170 fe7b0eaf443a60eed92cb40de729af77 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 1.6E-18 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS03170 fe7b0eaf443a60eed92cb40de729af77 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.6E-18 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS03170 fe7b0eaf443a60eed92cb40de729af77 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 1.6E-18 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS03170 fe7b0eaf443a60eed92cb40de729af77 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 26 37 1.6E-18 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS03170 fe7b0eaf443a60eed92cb40de729af77 124 Pfam PF01022 Bacterial regulatory protein, arsR family 12 58 2.7E-14 T 25-04-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CLFO_RS04045 7a9781c1c31618a3053b4108cedff3ac 329 Gene3D G3DSA:3.20.20.70 15 266 4.5E-29 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS04045 7a9781c1c31618a3053b4108cedff3ac 329 Pfam PF00682 HMGL-like 20 263 2.0E-21 T 25-04-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 CLFO_RS04045 7a9781c1c31618a3053b4108cedff3ac 329 SUPERFAMILY SSF51569 13 291 1.41E-37 T 25-04-2017 CLFO_RS04065 53cffb582b64d52736069d9c5a960fc5 100 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 100 30.699 T 25-04-2017 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CLFO_RS04065 53cffb582b64d52736069d9c5a960fc5 100 Pfam PF02553 Cobalt transport protein component CbiN 13 77 4.2E-22 T 25-04-2017 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CLFO_RS08830 bc1e5cd149cbe5f3f37b002d93d0bb93 680 Pfam PF10145 Phage-related minor tail protein 84 282 1.0E-55 T 25-04-2017 IPR010090 Phage tail tape measure protein CLFO_RS08830 bc1e5cd149cbe5f3f37b002d93d0bb93 680 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 46 388 1.5E-81 T 25-04-2017 IPR010090 Phage tail tape measure protein CLFO_RS00410 a9fea6f9e43b3c29e7e671dc8c1e684d 79 Gene3D G3DSA:2.10.260.10 2 52 4.1E-28 T 25-04-2017 CLFO_RS00410 a9fea6f9e43b3c29e7e671dc8c1e684d 79 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 5.0E-10 T 25-04-2017 IPR007159 SpoVT-AbrB domain GO:0003677 CLFO_RS00410 a9fea6f9e43b3c29e7e671dc8c1e684d 79 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 7.4E-11 T 25-04-2017 IPR007159 SpoVT-AbrB domain GO:0003677 CLFO_RS00410 a9fea6f9e43b3c29e7e671dc8c1e684d 79 SUPERFAMILY SSF89447 2 53 1.2E-15 T 25-04-2017 CLFO_RS00410 a9fea6f9e43b3c29e7e671dc8c1e684d 79 SMART SM00966 8 51 4.0E-9 T 25-04-2017 IPR007159 SpoVT-AbrB domain GO:0003677 CLFO_RS07290 271a6a059e8560055fcdcb9bb4c64ea6 178 SMART SM01040 14 100 2.9E-42 T 25-04-2017 IPR003497 BRO N-terminal domain CLFO_RS07290 271a6a059e8560055fcdcb9bb4c64ea6 178 Pfam PF02498 BRO family, N-terminal domain 14 100 4.6E-30 T 25-04-2017 IPR003497 BRO N-terminal domain CLFO_RS11965 2e9516736d4e70ec690a382d0a6b0ba0 197 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 6 182 7.0E-10 T 25-04-2017 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 CLFO_RS11965 2e9516736d4e70ec690a382d0a6b0ba0 197 PIRSF PIRSF021362 3 191 4.0E-56 T 25-04-2017 IPR009206 Nucleotidase, putative CLFO_RS11965 2e9516736d4e70ec690a382d0a6b0ba0 197 Gene3D G3DSA:3.40.50.1000 65 162 8.6E-15 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS11965 2e9516736d4e70ec690a382d0a6b0ba0 197 Gene3D G3DSA:3.40.50.1000 5 21 8.6E-15 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS11965 2e9516736d4e70ec690a382d0a6b0ba0 197 SUPERFAMILY SSF56784 63 162 1.27E-16 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS11965 2e9516736d4e70ec690a382d0a6b0ba0 197 SUPERFAMILY SSF56784 6 17 1.27E-16 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS09015 deb66e67c5aca64faa7a9c3a69ff2231 307 Pfam PF00395 S-layer homology domain 99 140 7.0E-11 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS09015 deb66e67c5aca64faa7a9c3a69ff2231 307 Pfam PF00395 S-layer homology domain 159 204 3.6E-10 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS09015 deb66e67c5aca64faa7a9c3a69ff2231 307 Pfam PF00395 S-layer homology domain 34 74 3.9E-13 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS01250 58238a6a5a125f12785bff6960ebc823 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 2.4E-16 T 25-04-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLFO_RS01250 58238a6a5a125f12785bff6960ebc823 127 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 25-04-2017 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CLFO_RS01250 58238a6a5a125f12785bff6960ebc823 127 SUPERFAMILY SSF54593 2 124 6.31E-29 T 25-04-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLFO_RS01250 58238a6a5a125f12785bff6960ebc823 127 Gene3D G3DSA:3.10.180.10 2 124 4.8E-33 T 25-04-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLFO_RS01455 51122f3851fe47d1b79a5678502b627e 381 SUPERFAMILY SSF53448 3 229 2.49E-40 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS01455 51122f3851fe47d1b79a5678502b627e 381 Gene3D G3DSA:3.90.550.10 3 239 7.1E-37 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS01455 51122f3851fe47d1b79a5678502b627e 381 Pfam PF00535 Glycosyl transferase family 2 5 146 6.3E-24 T 25-04-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLFO_RS09585 844da11a9961a2f8b61f06c54dafa295 245 Pfam PF01478 Type IV leader peptidase family 93 201 9.6E-21 T 25-04-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CLFO_RS09585 844da11a9961a2f8b61f06c54dafa295 245 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 170 181 1.4E-12 T 25-04-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial CLFO_RS09585 844da11a9961a2f8b61f06c54dafa295 245 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 102 119 1.4E-12 T 25-04-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial CLFO_RS09585 844da11a9961a2f8b61f06c54dafa295 245 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 182 197 1.4E-12 T 25-04-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial CLFO_RS09585 844da11a9961a2f8b61f06c54dafa295 245 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 159 169 1.4E-12 T 25-04-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial CLFO_RS09585 844da11a9961a2f8b61f06c54dafa295 245 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 1 82 3.5E-32 T 25-04-2017 IPR010627 Peptidase A24A, N-terminal CLFO_RS07250 59d8c763af0ac9d64c4f354df6297675 274 Gene3D G3DSA:3.30.1180.10 150 274 2.4E-37 T 25-04-2017 CLFO_RS07250 59d8c763af0ac9d64c4f354df6297675 274 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 269 1.6E-86 T 25-04-2017 IPR003797 DegV CLFO_RS07250 59d8c763af0ac9d64c4f354df6297675 274 Gene3D G3DSA:3.40.50.10170 2 147 3.8E-54 T 25-04-2017 CLFO_RS07250 59d8c763af0ac9d64c4f354df6297675 274 SUPERFAMILY SSF82549 2 274 1.83E-87 T 25-04-2017 CLFO_RS07250 59d8c763af0ac9d64c4f354df6297675 274 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 2 273 6.6E-98 T 25-04-2017 IPR003797 DegV CLFO_RS16795 f3e4e4566e113a7c97f4b944b9d6651c 83 Pfam PF12787 EcsC protein family 3 79 7.9E-11 T 25-04-2017 IPR024787 EcsC protein CLFO_RS18595 fe86491121d12f25b2359be476da617a 381 Pfam PF02608 Basic membrane protein 53 337 3.4E-49 T 25-04-2017 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 CLFO_RS18595 fe86491121d12f25b2359be476da617a 381 Gene3D G3DSA:3.40.50.2300 43 169 1.6E-31 T 25-04-2017 CLFO_RS18595 fe86491121d12f25b2359be476da617a 381 Gene3D G3DSA:3.40.50.2300 170 315 1.5E-43 T 25-04-2017 CLFO_RS14330 11f056e7e124b6d27aa24ff1d65ef4c9 512 SUPERFAMILY SSF53901 183 292 7.97E-11 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS14330 11f056e7e124b6d27aa24ff1d65ef4c9 512 PIRSF PIRSF037559 1 512 1.1E-277 T 25-04-2017 IPR017236 Glycine/sarcosine/betaine reductase, component C, beta CLFO_RS14330 11f056e7e124b6d27aa24ff1d65ef4c9 512 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 255 332 3.7E-7 T 25-04-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CLFO_RS14330 11f056e7e124b6d27aa24ff1d65ef4c9 512 Gene3D G3DSA:3.40.47.10 179 293 4.6E-18 T 25-04-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 CLFO_RS02520 af4138bedb4be73289a92e4fc3e0a638 283 Gene3D G3DSA:3.40.190.10 239 280 4.1E-46 T 25-04-2017 CLFO_RS02520 af4138bedb4be73289a92e4fc3e0a638 283 Gene3D G3DSA:3.40.190.10 57 137 4.1E-46 T 25-04-2017 CLFO_RS02520 af4138bedb4be73289a92e4fc3e0a638 283 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 83 96 - T 25-04-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CLFO_RS02520 af4138bedb4be73289a92e4fc3e0a638 283 Gene3D G3DSA:3.40.190.10 138 238 3.6E-13 T 25-04-2017 CLFO_RS02520 af4138bedb4be73289a92e4fc3e0a638 283 SUPERFAMILY SSF53850 1 21 5.61E-69 T 25-04-2017 CLFO_RS02520 af4138bedb4be73289a92e4fc3e0a638 283 SUPERFAMILY SSF53850 50 279 5.61E-69 T 25-04-2017 CLFO_RS02520 af4138bedb4be73289a92e4fc3e0a638 283 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 61 277 5.2E-61 T 25-04-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLFO_RS02520 af4138bedb4be73289a92e4fc3e0a638 283 SMART SM00062 60 279 2.6E-61 T 25-04-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLFO_RS19355 8c9109e926585734c5f6f675468a6d00 64 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 1 39 6.0E-5 T 25-04-2017 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLFO_RS19355 8c9109e926585734c5f6f675468a6d00 64 Pfam PF08141 Small acid-soluble spore protein H family 1 59 7.2E-18 T 25-04-2017 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 CLFO_RS10255 9bc63ca355017328a2ecd9d291f54065 372 Pfam PF00589 Phage integrase family 169 356 2.9E-30 T 25-04-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS10255 9bc63ca355017328a2ecd9d291f54065 372 Gene3D G3DSA:1.10.150.130 37 152 8.7E-8 T 25-04-2017 IPR023109 Integrase/recombinase, N-terminal CLFO_RS10255 9bc63ca355017328a2ecd9d291f54065 372 Gene3D G3DSA:1.10.443.10 170 363 2.1E-35 T 25-04-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS10255 9bc63ca355017328a2ecd9d291f54065 372 SUPERFAMILY SSF56349 37 362 8.54E-34 T 25-04-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLFO_RS09105 7c983ab11d4090fc4ba55832b10dc3d8 343 SUPERFAMILY SSF89372 13 230 2.48E-6 T 25-04-2017 CLFO_RS05335 a857190db703a54b0a909d7e9d4b8991 384 Pfam PF04015 Domain of unknown function (DUF362) 43 244 9.3E-43 T 25-04-2017 IPR007160 Domain of unknown function DUF362 CLFO_RS05335 a857190db703a54b0a909d7e9d4b8991 384 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 355 366 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS05335 a857190db703a54b0a909d7e9d4b8991 384 Gene3D G3DSA:3.30.70.20 316 373 1.8E-12 T 25-04-2017 CLFO_RS05335 a857190db703a54b0a909d7e9d4b8991 384 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 326 337 - T 25-04-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLFO_RS05335 a857190db703a54b0a909d7e9d4b8991 384 SUPERFAMILY SSF54862 303 372 6.63E-16 T 25-04-2017 CLFO_RS07340 d66eb40c3666e7d998e874d8901fe9e2 264 Gene3D G3DSA:1.10.10.60 137 210 5.6E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS17395 109ddc6b5f468e4cebad61ad5dc999dd 151 Pfam PF11171 Protein of unknown function (DUF2958) 3 103 4.8E-11 T 25-04-2017 IPR021341 Protein of unknown function DUF2958 CLFO_RS10540 8e10b067f5f73a2612a9fa19796db947 89 Gene3D G3DSA:1.10.287.1080 9 68 7.2E-4 T 25-04-2017 CLFO_RS17585 a9a7406a3e460c6d2faa2c218178a908 430 Pfam PF01933 Uncharacterised protein family UPF0052 101 392 2.1E-101 T 25-04-2017 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CLFO_RS17585 a9a7406a3e460c6d2faa2c218178a908 430 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 101 414 3.6E-113 T 25-04-2017 IPR010119 Gluconeogenesis factor CLFO_RS17585 a9a7406a3e460c6d2faa2c218178a908 430 Gene3D G3DSA:3.40.50.10680 171 416 1.9E-50 T 25-04-2017 CLFO_RS17585 a9a7406a3e460c6d2faa2c218178a908 430 Hamap MF_00973 Gluconeogenesis factor. 97 417 34.031 T 25-04-2017 IPR010119 Gluconeogenesis factor CLFO_RS17585 a9a7406a3e460c6d2faa2c218178a908 430 SUPERFAMILY SSF142338 97 412 2.49E-92 T 25-04-2017 CLFO_RS13335 b47bae44cc06027e06afa8a7bdfaf089 116 Pfam PF05717 IS66 Orf2 like protein 9 104 1.3E-34 T 25-04-2017 IPR008878 Transposase IS66, Orf2 CLFO_RS17090 b47bae44cc06027e06afa8a7bdfaf089 116 Pfam PF05717 IS66 Orf2 like protein 9 104 1.3E-34 T 25-04-2017 IPR008878 Transposase IS66, Orf2 CLFO_RS18775 b47bae44cc06027e06afa8a7bdfaf089 116 Pfam PF05717 IS66 Orf2 like protein 9 104 1.3E-34 T 25-04-2017 IPR008878 Transposase IS66, Orf2 CLFO_RS18290 d59059a0ad600f584424b3867ed2afbe 354 Pfam PF12791 Anti-sigma factor N-terminus 8 62 8.3E-13 T 25-04-2017 IPR024449 Anti-sigma factor RsgI, N-terminal CLFO_RS04995 a3d4536ad87ee1ab8501969823154214 368 Pfam PF04143 Sulphur transport 207 323 8.0E-9 T 25-04-2017 IPR007272 Sulphur transport domain CLFO_RS04995 a3d4536ad87ee1ab8501969823154214 368 TIGRFAM TIGR04112 seleno_YedE: putative selenium metabolism protein, YedE family 8 345 6.6E-155 T 25-04-2017 IPR026366 Putative selenium metabolism protein, YedE family CLFO_RS18545 6470016e059a8870c24f57e1b1c68881 198 Gene3D G3DSA:1.10.10.60 7 56 9.3E-17 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS18545 6470016e059a8870c24f57e1b1c68881 198 SUPERFAMILY SSF48498 80 191 1.13E-14 T 25-04-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLFO_RS18545 6470016e059a8870c24f57e1b1c68881 198 Pfam PF08359 YsiA-like protein, C-terminal region 79 189 3.3E-6 T 25-04-2017 IPR013570 Transcription regulator YsiA, C-terminal CLFO_RS18545 6470016e059a8870c24f57e1b1c68881 198 Gene3D G3DSA:1.10.357.10 57 190 1.2E-16 T 25-04-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CLFO_RS18545 6470016e059a8870c24f57e1b1c68881 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.2E-6 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS18545 6470016e059a8870c24f57e1b1c68881 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.2E-6 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS18545 6470016e059a8870c24f57e1b1c68881 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 8.0E-12 T 25-04-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CLFO_RS18545 6470016e059a8870c24f57e1b1c68881 198 SUPERFAMILY SSF46689 7 70 4.34E-14 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS18665 07ee70c6393d49fdf4eb585af35d46b9 103 SUPERFAMILY SSF46785 3 101 7.55E-28 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18665 07ee70c6393d49fdf4eb585af35d46b9 103 Gene3D G3DSA:1.10.10.10 3 101 2.3E-31 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18665 07ee70c6393d49fdf4eb585af35d46b9 103 Pfam PF03551 Transcriptional regulator PadR-like family 18 88 1.2E-20 T 25-04-2017 IPR005149 Transcription regulator PadR, N-terminal CLFO_RS06935 e01549254022ee59e3029d7186b834c9 316 Pfam PF03595 Voltage-dependent anion channel 15 296 3.3E-23 T 25-04-2017 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CLFO_RS16430 41026ec44b6114f2e4b0bd0d8d168a69 235 Pfam PF13649 Methyltransferase domain 41 136 2.5E-12 T 25-04-2017 CLFO_RS16430 41026ec44b6114f2e4b0bd0d8d168a69 235 Gene3D G3DSA:3.40.50.150 18 193 4.5E-29 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS16430 41026ec44b6114f2e4b0bd0d8d168a69 235 SUPERFAMILY SSF53335 13 197 7.91E-29 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS21270 942d7a67ba05cb0deec6c384a0ea493d 192 Pfam PF08747 Domain of unknown function (DUF1788) 66 189 5.6E-45 T 25-04-2017 IPR014858 Protein of unknown function DUF1788 CLFO_RS09920 2dd16f4a521e045c051e0a39f58ed49e 324 Pfam PF03851 UV-endonuclease UvdE 5 276 1.8E-86 T 25-04-2017 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 CLFO_RS09920 2dd16f4a521e045c051e0a39f58ed49e 324 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 2 304 1.5E-81 T 25-04-2017 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 CLFO_RS09920 2dd16f4a521e045c051e0a39f58ed49e 324 SUPERFAMILY SSF51658 78 310 1.39E-11 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS00740 1f09363722be6d10f227637fcdc78fb1 300 SUPERFAMILY SSF53448 3 286 9.85E-60 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00740 1f09363722be6d10f227637fcdc78fb1 300 Gene3D G3DSA:3.90.550.10 3 257 4.7E-57 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS00740 1f09363722be6d10f227637fcdc78fb1 300 Pfam PF13641 Glycosyltransferase like family 2 3 233 4.8E-27 T 25-04-2017 CLFO_RS00730 1fbdf956c6136371ce1650e9a78b7593 644 SUPERFAMILY SSF53649 264 608 1.08E-57 T 25-04-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLFO_RS00730 1fbdf956c6136371ce1650e9a78b7593 644 PIRSF PIRSF005091 3 635 9.3E-154 T 25-04-2017 IPR012160 Lipoteichoic acid synthase-like CLFO_RS00730 1fbdf956c6136371ce1650e9a78b7593 644 Gene3D G3DSA:3.40.720.10 265 565 2.7E-41 T 25-04-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CLFO_RS00730 1fbdf956c6136371ce1650e9a78b7593 644 Pfam PF00884 Sulfatase 265 553 2.3E-36 T 25-04-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CLFO_RS08075 8d991fccf985dec89608715cefddb0b4 186 Pfam PF01381 Helix-turn-helix 5 52 3.6E-5 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS08075 8d991fccf985dec89608715cefddb0b4 186 SUPERFAMILY SSF47413 3 54 8.73E-6 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS08075 8d991fccf985dec89608715cefddb0b4 186 Gene3D G3DSA:1.10.260.40 5 52 2.7E-5 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS08430 aa1782630fd9d51a4c8b55f7ac39a84c 191 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 5.0E-62 T 25-04-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CLFO_RS08430 aa1782630fd9d51a4c8b55f7ac39a84c 191 PIRSF PIRSF006102 1 191 2.8E-59 T 25-04-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CLFO_RS08430 aa1782630fd9d51a4c8b55f7ac39a84c 191 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.619 T 25-04-2017 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CLFO_RS08430 aa1782630fd9d51a4c8b55f7ac39a84c 191 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-87 T 25-04-2017 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CLFO_RS11155 81a68d944adeec1a414d58080bfec8d0 156 Pfam PF00460 Flagella basal body rod protein 33 59 1.4E-7 T 25-04-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CLFO_RS11155 81a68d944adeec1a414d58080bfec8d0 156 PIRSF PIRSF002889 20 154 3.9E-37 T 25-04-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CLFO_RS11155 81a68d944adeec1a414d58080bfec8d0 156 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 27 152 2.3E-31 T 25-04-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CLFO_RS11155 81a68d944adeec1a414d58080bfec8d0 156 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 35 55 - T 25-04-2017 IPR019776 Flagellar basal body rod protein, conserved site CLFO_RS11700 e728aa920f81815e4e802b9c51565f92 112 Pfam PF06947 Protein of unknown function (DUF1290) 23 107 8.2E-38 T 25-04-2017 IPR009709 Protein of unknown function DUF1290 CLFO_RS11700 e728aa920f81815e4e802b9c51565f92 112 PIRSF PIRSF018579 1 112 2.7E-40 T 25-04-2017 IPR009709 Protein of unknown function DUF1290 CLFO_RS21020 3358dabb26bd97c4a476e37a6ea7a6d3 495 Gene3D G3DSA:1.10.390.10 359 495 1.2E-20 T 25-04-2017 CLFO_RS21020 3358dabb26bd97c4a476e37a6ea7a6d3 495 Pfam PF01433 Peptidase family M1 211 438 4.8E-14 T 25-04-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CLFO_RS21020 3358dabb26bd97c4a476e37a6ea7a6d3 495 SUPERFAMILY SSF55486 282 495 1.61E-45 T 25-04-2017 CLFO_RS07365 4293381a67ca93f6b8b42651bc95ce72 132 SMART SM00507 64 120 2.9E-5 T 25-04-2017 IPR003615 HNH nuclease CLFO_RS07365 4293381a67ca93f6b8b42651bc95ce72 132 Pfam PF01844 HNH endonuclease 77 124 9.3E-10 T 25-04-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CLFO_RS01435 2ebc43a3df9b76afb546340657a4de52 131 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 6 122 3.0E-19 T 25-04-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLFO_RS01435 2ebc43a3df9b76afb546340657a4de52 131 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 123 6.2E-33 T 25-04-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLFO_RS01435 2ebc43a3df9b76afb546340657a4de52 131 SUPERFAMILY SSF56214 3 122 1.44E-28 T 25-04-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CLFO_RS01435 2ebc43a3df9b76afb546340657a4de52 131 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 123 24.02 T 25-04-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLFO_RS01435 2ebc43a3df9b76afb546340657a4de52 131 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 122 4.7E-33 T 25-04-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CLFO_RS01435 2ebc43a3df9b76afb546340657a4de52 131 Gene3D G3DSA:3.90.470.20 3 123 1.6E-34 T 25-04-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CLFO_RS01435 2ebc43a3df9b76afb546340657a4de52 131 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 3 119 1.2E-20 T 25-04-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CLFO_RS14665 fbcc955ee785fbe28e15a1b6ac86f2a8 167 Pfam PF01613 Flavin reductase like domain 49 165 5.0E-9 T 25-04-2017 IPR002563 Flavin reductase like domain GO:0010181 CLFO_RS14665 fbcc955ee785fbe28e15a1b6ac86f2a8 167 SUPERFAMILY SSF50475 23 166 4.17E-17 T 25-04-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CLFO_RS14665 fbcc955ee785fbe28e15a1b6ac86f2a8 167 Gene3D G3DSA:2.30.110.10 23 166 3.7E-34 T 25-04-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CLFO_RS18845 73c4969bfbfe81d02a1579bcc1c8f08a 420 Pfam PF01385 Probable transposase 183 298 2.1E-13 T 25-04-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 CLFO_RS18845 73c4969bfbfe81d02a1579bcc1c8f08a 420 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 264 340 1.5E-16 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS20080 35d8cf55d1079efc4f9384e8f2091dbe 321 Gene3D G3DSA:3.60.70.12 6 314 1.7E-73 T 25-04-2017 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLFO_RS20080 35d8cf55d1079efc4f9384e8f2091dbe 321 Pfam PF03576 Peptidase family S58 7 312 5.4E-55 T 25-04-2017 IPR005321 Peptidase S58, DmpA CLFO_RS20080 35d8cf55d1079efc4f9384e8f2091dbe 321 SUPERFAMILY SSF56266 6 318 6.54E-72 T 25-04-2017 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CLFO_RS01645 741b24f3809d5328bc644503f6b21cb6 180 Pfam PF03773 Predicted permease 48 177 6.9E-11 T 25-04-2017 IPR005524 Predicted permease DUF318 CLFO_RS10775 ff8f06fc4b71e3e5286dc0f6aa4d43d5 148 Gene3D G3DSA:3.30.250.10 62 120 2.3E-26 T 25-04-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal CLFO_RS10775 ff8f06fc4b71e3e5286dc0f6aa4d43d5 148 Pfam PF00154 recA bacterial DNA recombination protein 10 62 8.3E-21 T 25-04-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLFO_RS10775 ff8f06fc4b71e3e5286dc0f6aa4d43d5 148 PRINTS PR00142 RecA protein signature 4 32 5.9E-33 T 25-04-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLFO_RS10775 ff8f06fc4b71e3e5286dc0f6aa4d43d5 148 PRINTS PR00142 RecA protein signature 37 66 5.9E-33 T 25-04-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLFO_RS10775 ff8f06fc4b71e3e5286dc0f6aa4d43d5 148 PRINTS PR00142 RecA protein signature 91 108 5.9E-33 T 25-04-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CLFO_RS10775 ff8f06fc4b71e3e5286dc0f6aa4d43d5 148 Gene3D G3DSA:3.40.50.300 10 61 1.1E-10 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS10775 ff8f06fc4b71e3e5286dc0f6aa4d43d5 148 SUPERFAMILY SSF54752 62 120 8.63E-22 T 25-04-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal CLFO_RS10775 ff8f06fc4b71e3e5286dc0f6aa4d43d5 148 SUPERFAMILY SSF52540 11 61 7.79E-5 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16460 309024189b5e933278353e658a0e602f 249 Pfam PF00005 ABC transporter 25 171 2.6E-31 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS16460 309024189b5e933278353e658a0e602f 249 Gene3D G3DSA:3.40.50.300 1 241 4.3E-70 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16460 309024189b5e933278353e658a0e602f 249 SMART SM00382 34 220 9.2E-10 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS16460 309024189b5e933278353e658a0e602f 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS16460 309024189b5e933278353e658a0e602f 249 SUPERFAMILY SSF52540 1 232 1.41E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS14235 7db9698521007b860eb1ef0d10c5f380 246 SUPERFAMILY SSF143422 1 128 2.35E-23 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS14235 7db9698521007b860eb1ef0d10c5f380 246 SMART SM01321 9 123 4.9E-36 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS14235 7db9698521007b860eb1ef0d10c5f380 246 Pfam PF01797 Transposase IS200 like 14 123 1.0E-14 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS14235 7db9698521007b860eb1ef0d10c5f380 246 Gene3D G3DSA:3.30.70.1290 12 126 6.4E-12 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS00045 d6099f3dcc7bb6a8cea7fb1867f9879b 135 Gene3D G3DSA:3.30.565.10 18 134 3.6E-14 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS00045 d6099f3dcc7bb6a8cea7fb1867f9879b 135 Pfam PF13581 Histidine kinase-like ATPase domain 14 135 3.0E-27 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS00045 d6099f3dcc7bb6a8cea7fb1867f9879b 135 SUPERFAMILY SSF55874 36 134 4.85E-13 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS13325 edf2a4111e5d6d553a28b43d2025833a 395 Pfam PF00872 Transposase, Mutator family 18 373 2.9E-119 T 25-04-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLFO_RS13325 edf2a4111e5d6d553a28b43d2025833a 395 ProSitePatterns PS01007 Transposases, Mutator family, signature. 227 251 - T 25-04-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CLFO_RS05705 dba4203fd7cecc599c4a23617803ac3a 349 Pfam PF03358 NADPH-dependent FMN reductase 161 316 5.9E-18 T 25-04-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CLFO_RS05705 dba4203fd7cecc599c4a23617803ac3a 349 Gene3D G3DSA:3.40.50.360 162 330 3.9E-16 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS05705 dba4203fd7cecc599c4a23617803ac3a 349 SUPERFAMILY SSF52218 159 316 1.23E-18 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS02565 e5c16db7f6c1eb02dab955a30373f58e 328 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 6 318 6.0E-121 T 25-04-2017 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CLFO_RS02565 e5c16db7f6c1eb02dab955a30373f58e 328 Gene3D G3DSA:3.40.50.970 2 325 6.8E-137 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS02565 e5c16db7f6c1eb02dab955a30373f58e 328 Pfam PF00676 Dehydrogenase E1 component 14 309 1.8E-97 T 25-04-2017 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 CLFO_RS02565 e5c16db7f6c1eb02dab955a30373f58e 328 SUPERFAMILY SSF52518 2 323 1.96E-106 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS07725 3be1469e1580b9a6cc8426f67c671834 185 Pfam PF14265 Domain of unknown function (DUF4355) 36 144 1.3E-11 T 25-04-2017 IPR025580 Protein of unknown function DUF4355 CLFO_RS02500 74c0c404d6e7ae24c52cf5973fa55d35 488 PIRSF PIRSF005690 5 488 4.1E-138 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS02500 74c0c404d6e7ae24c52cf5973fa55d35 488 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 26 478 4.4E-156 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS19550 70e73953df975a3e5c5e19532ea5d7f1 279 Pfam PF00005 ABC transporter 25 172 4.7E-28 T 25-04-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CLFO_RS19550 70e73953df975a3e5c5e19532ea5d7f1 279 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 5 276 1.5E-122 T 25-04-2017 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 CLFO_RS19550 70e73953df975a3e5c5e19532ea5d7f1 279 SMART SM00382 34 220 2.7E-16 T 25-04-2017 IPR003593 AAA+ ATPase domain CLFO_RS19550 70e73953df975a3e5c5e19532ea5d7f1 279 SUPERFAMILY SSF52540 3 235 2.6E-60 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS19550 70e73953df975a3e5c5e19532ea5d7f1 279 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 25-04-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CLFO_RS19550 70e73953df975a3e5c5e19532ea5d7f1 279 Gene3D G3DSA:3.40.50.300 3 235 2.3E-68 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05085 4fc8af6f5199804ab55a8489de21fd8a 360 Gene3D G3DSA:1.10.287.950 95 311 7.4E-45 T 25-04-2017 CLFO_RS05085 4fc8af6f5199804ab55a8489de21fd8a 360 SMART SM00283 79 340 3.4E-34 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS05085 4fc8af6f5199804ab55a8489de21fd8a 360 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 145 325 1.4E-40 T 25-04-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CLFO_RS05085 4fc8af6f5199804ab55a8489de21fd8a 360 SUPERFAMILY SSF58104 55 349 2.35E-57 T 25-04-2017 CLFO_RS02380 05c049ca5c0f957305ebb1a9c786d101 336 SMART SM00909 234 323 9.8E-16 T 25-04-2017 IPR019606 GerMN domain CLFO_RS02380 05c049ca5c0f957305ebb1a9c786d101 336 SMART SM00909 86 178 1.4E-23 T 25-04-2017 IPR019606 GerMN domain CLFO_RS02380 05c049ca5c0f957305ebb1a9c786d101 336 Pfam PF10646 Sporulation and spore germination 63 172 4.1E-23 T 25-04-2017 IPR019606 GerMN domain CLFO_RS02380 05c049ca5c0f957305ebb1a9c786d101 336 Pfam PF10646 Sporulation and spore germination 207 319 8.8E-14 T 25-04-2017 IPR019606 GerMN domain CLFO_RS12695 b3749dcf62d0b657f329a05ebf1793b8 448 SUPERFAMILY SSF161070 9 447 4.45E-148 T 25-04-2017 CLFO_RS12695 b3749dcf62d0b657f329a05ebf1793b8 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 90 116 1.1E-15 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS12695 b3749dcf62d0b657f329a05ebf1793b8 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 1.1E-15 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS12695 b3749dcf62d0b657f329a05ebf1793b8 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 1.1E-15 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS12695 b3749dcf62d0b657f329a05ebf1793b8 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 386 406 1.1E-15 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS12695 b3749dcf62d0b657f329a05ebf1793b8 448 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 33 47 - T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS12695 b3749dcf62d0b657f329a05ebf1793b8 448 Pfam PF00209 Sodium:neurotransmitter symporter family 9 123 3.3E-27 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS12695 b3749dcf62d0b657f329a05ebf1793b8 448 Pfam PF00209 Sodium:neurotransmitter symporter family 153 446 7.5E-43 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS14550 287b144c3daac0b5163c349a9b4f64c5 386 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 2 381 1.4E-152 T 25-04-2017 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CLFO_RS01335 a815277a64b43f6aceedd45d7c830b04 221 Pfam PF00156 Phosphoribosyl transferase domain 160 214 2.2E-7 T 25-04-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 CLFO_RS01335 a815277a64b43f6aceedd45d7c830b04 221 SUPERFAMILY SSF53271 65 214 2.36E-30 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS01335 a815277a64b43f6aceedd45d7c830b04 221 Gene3D G3DSA:3.40.50.2020 66 215 7.5E-32 T 25-04-2017 IPR029057 Phosphoribosyltransferase-like CLFO_RS14035 5c938b273f7c8cb4fae47781e5307fbc 155 SUPERFAMILY SSF118196 2 153 9.55E-39 T 25-04-2017 IPR023370 TsaA-like domain CLFO_RS14035 5c938b273f7c8cb4fae47781e5307fbc 155 Gene3D G3DSA:2.40.30.70 14 135 2.9E-32 T 25-04-2017 IPR023370 TsaA-like domain CLFO_RS14035 5c938b273f7c8cb4fae47781e5307fbc 155 Pfam PF01980 Uncharacterised protein family UPF0066 14 123 2.2E-25 T 25-04-2017 IPR023370 TsaA-like domain CLFO_RS11400 d49f6d741fed11a4f6e7c56cacaddd62 257 PIRSF PIRSF006594 12 257 7.1E-52 T 25-04-2017 IPR002829 Protein of unknown function DUF116 CLFO_RS11400 d49f6d741fed11a4f6e7c56cacaddd62 257 Pfam PF01976 Protein of unknown function DUF116 99 251 2.3E-50 T 25-04-2017 IPR002829 Protein of unknown function DUF116 CLFO_RS01845 e80af94409dd91389df2a0e471da4418 401 Pfam PF12704 MacB-like periplasmic core domain 21 243 2.5E-33 T 25-04-2017 IPR025857 MacB-like periplasmic core domain CLFO_RS01845 e80af94409dd91389df2a0e471da4418 401 Pfam PF02687 FtsX-like permease family 281 394 1.0E-21 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS17805 0ba90f865849344681f38e9c8b5d965c 379 SUPERFAMILY SSF53822 35 378 2.83E-95 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS17805 0ba90f865849344681f38e9c8b5d965c 379 Pfam PF13458 Periplasmic binding protein 35 373 7.8E-71 T 25-04-2017 IPR028081 Leucine-binding protein domain CLFO_RS17805 0ba90f865849344681f38e9c8b5d965c 379 Gene3D G3DSA:3.40.50.2300 34 233 3.0E-58 T 25-04-2017 CLFO_RS17805 0ba90f865849344681f38e9c8b5d965c 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 36 52 4.0E-12 T 25-04-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CLFO_RS17805 0ba90f865849344681f38e9c8b5d965c 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 265 283 4.0E-12 T 25-04-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CLFO_RS17805 0ba90f865849344681f38e9c8b5d965c 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 77 95 4.0E-12 T 25-04-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CLFO_RS17805 0ba90f865849344681f38e9c8b5d965c 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 58 74 4.0E-12 T 25-04-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CLFO_RS03835 1301d75cf8e77ca37b7dc3022dcd36c8 333 PIRSF PIRSF006470 5 333 3.2E-97 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS03835 1301d75cf8e77ca37b7dc3022dcd36c8 333 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 316 2.3E-88 T 25-04-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CLFO_RS03835 1301d75cf8e77ca37b7dc3022dcd36c8 333 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 40 294 9.5E-74 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS10005 7a3485b78f9c50cc075cf856945ab52c 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 2.3E-12 T 25-04-2017 IPR012452 Protein of unknown function DUF1657 CLFO_RS10005 7a3485b78f9c50cc075cf856945ab52c 68 Gene3D G3DSA:1.20.1260.10 2 60 6.8E-4 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS00365 62407a1c6abb586860708605da7f197f 74 Pfam PF10764 Inhibitor of sigma-G Gin 20 64 1.1E-15 T 25-04-2017 IPR019700 Anti-sigma-G factor Gin CLFO_RS20785 12060c8e8a5b8b0d7f4a67862c85c43e 311 Gene3D G3DSA:1.10.606.10 29 271 3.6E-49 T 25-04-2017 IPR016119 Bromoperoxidase/chloroperoxidase, C-terminal GO:0004601|GO:0055114 CLFO_RS20785 12060c8e8a5b8b0d7f4a67862c85c43e 311 SUPERFAMILY SSF48317 108 263 8.24E-34 T 25-04-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLFO_RS20785 12060c8e8a5b8b0d7f4a67862c85c43e 311 Pfam PF01569 PAP2 superfamily 157 259 2.7E-13 T 25-04-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLFO_RS04545 c88e69ff819c3634135cbce768a8e70e 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 54 3.2E-17 T 25-04-2017 IPR012452 Protein of unknown function DUF1657 CLFO_RS15075 bbf43ac6a8638e71d0e8f2083a747d48 298 Gene3D G3DSA:1.10.3720.10 14 280 6.3E-55 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15075 bbf43ac6a8638e71d0e8f2083a747d48 298 SUPERFAMILY SSF161098 15 292 2.34E-56 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS15075 bbf43ac6a8638e71d0e8f2083a747d48 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 280 2.2E-17 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS08065 4a634c0e8ac07ffa56010a2c8f0cfe28 87 Pfam PF01381 Helix-turn-helix 7 60 1.1E-13 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS08065 4a634c0e8ac07ffa56010a2c8f0cfe28 87 Gene3D G3DSA:1.10.260.40 6 62 1.9E-16 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS08065 4a634c0e8ac07ffa56010a2c8f0cfe28 87 SMART SM00530 6 61 1.6E-11 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS08065 4a634c0e8ac07ffa56010a2c8f0cfe28 87 SUPERFAMILY SSF47413 6 63 2.68E-14 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS18700 fa5e18e1c6a63cdf371a93daf308a5bb 184 Gene3D G3DSA:2.160.10.10 2 184 1.1E-63 T 25-04-2017 CLFO_RS18700 fa5e18e1c6a63cdf371a93daf308a5bb 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 3.5E-10 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS18700 fa5e18e1c6a63cdf371a93daf308a5bb 184 Pfam PF12464 Maltose acetyltransferase 7 58 2.7E-20 T 25-04-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CLFO_RS18700 fa5e18e1c6a63cdf371a93daf308a5bb 184 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 95 110 0.024 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS18700 fa5e18e1c6a63cdf371a93daf308a5bb 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 25-04-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CLFO_RS18700 fa5e18e1c6a63cdf371a93daf308a5bb 184 SMART SM01266 5 59 4.5E-25 T 25-04-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CLFO_RS18700 fa5e18e1c6a63cdf371a93daf308a5bb 184 SUPERFAMILY SSF51161 1 183 2.08E-55 T 25-04-2017 IPR011004 Trimeric LpxA-like CLFO_RS04305 da6f0804ce1970cb5e45ff0658f3ecf2 304 SUPERFAMILY SSF158682 19 142 3.4E-10 T 25-04-2017 IPR029024 TerB-like CLFO_RS04305 da6f0804ce1970cb5e45ff0658f3ecf2 304 Gene3D G3DSA:1.10.3680.10 30 142 8.4E-9 T 25-04-2017 IPR029024 TerB-like CLFO_RS11660 2f2a9b5a4e4d384feaa0cbcf3757c156 229 SMART SM00448 4 117 1.8E-45 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS11660 2f2a9b5a4e4d384feaa0cbcf3757c156 229 Gene3D G3DSA:3.40.50.2300 2 130 1.4E-44 T 25-04-2017 CLFO_RS11660 2f2a9b5a4e4d384feaa0cbcf3757c156 229 SUPERFAMILY SSF46894 133 228 1.55E-32 T 25-04-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CLFO_RS11660 2f2a9b5a4e4d384feaa0cbcf3757c156 229 SUPERFAMILY SSF52172 2 136 5.55E-45 T 25-04-2017 IPR011006 CheY-like superfamily CLFO_RS11660 2f2a9b5a4e4d384feaa0cbcf3757c156 229 Pfam PF00072 Response regulator receiver domain 6 118 6.4E-32 T 25-04-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CLFO_RS11660 2f2a9b5a4e4d384feaa0cbcf3757c156 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 9.9E-30 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS11660 2f2a9b5a4e4d384feaa0cbcf3757c156 229 Gene3D G3DSA:1.10.10.10 131 228 7.0E-37 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS11660 2f2a9b5a4e4d384feaa0cbcf3757c156 229 SMART SM00862 153 228 8.0E-29 T 25-04-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CLFO_RS03955 ffcdedba94a34722e76369c4a56afa2d 153 Gene3D G3DSA:3.20.80.10 5 153 5.0E-19 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS03955 ffcdedba94a34722e76369c4a56afa2d 153 SUPERFAMILY SSF55136 4 153 5.23E-22 T 25-04-2017 IPR011256 Regulatory factor, effector binding domain CLFO_RS03955 ffcdedba94a34722e76369c4a56afa2d 153 SMART SM00871 3 153 1.6E-21 T 25-04-2017 IPR010499 Bacterial transcription activator, effector binding CLFO_RS03955 ffcdedba94a34722e76369c4a56afa2d 153 Pfam PF06445 GyrI-like small molecule binding domain 5 153 1.2E-22 T 25-04-2017 IPR029442 GyrI-like small molecule binding domain CLFO_RS08445 23deaf4628b85a80dc51478aa93419e4 82 Pfam PF14209 Domain of unknown function (DUF4321) 32 79 1.0E-11 T 25-04-2017 IPR025470 Protein of unknown function DUF4321 CLFO_RS03585 def879806090df1d89482afa425a1ad7 200 Pfam PF12804 MobA-like NTP transferase domain 8 151 1.2E-33 T 25-04-2017 IPR025877 MobA-like NTP transferase CLFO_RS03585 def879806090df1d89482afa425a1ad7 200 SUPERFAMILY SSF53448 6 153 9.81E-32 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS03585 def879806090df1d89482afa425a1ad7 200 Gene3D G3DSA:3.90.550.10 3 198 3.7E-48 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS03585 def879806090df1d89482afa425a1ad7 200 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 195 22.861 T 25-04-2017 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 CLFO_RS20410 dd919d82be5b5ed0fa7513b74efdb359 406 Pfam PF01734 Patatin-like phospholipase 4 190 9.2E-20 T 25-04-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 CLFO_RS20410 dd919d82be5b5ed0fa7513b74efdb359 406 Gene3D G3DSA:3.40.1090.10 4 194 2.5E-5 T 25-04-2017 CLFO_RS20410 dd919d82be5b5ed0fa7513b74efdb359 406 SUPERFAMILY SSF52151 2 311 1.46E-38 T 25-04-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CLFO_RS06490 46f3ace6c0a03e9f78c44e286626ac87 271 Gene3D G3DSA:3.40.50.720 5 251 1.3E-73 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS06490 46f3ace6c0a03e9f78c44e286626ac87 271 Pfam PF00899 ThiF family 11 247 2.8E-61 T 25-04-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLFO_RS06490 46f3ace6c0a03e9f78c44e286626ac87 271 SUPERFAMILY SSF69572 3 260 4.32E-90 T 25-04-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CLFO_RS13965 1399a63ad3106c9b5d21113054340713 222 Pfam PF09335 SNARE associated Golgi protein 66 182 6.8E-30 T 25-04-2017 IPR032816 SNARE associated Golgi protein CLFO_RS04855 51e100ef5b39a9d9e2607a489d5aa47b 740 Pfam PF00395 S-layer homology domain 684 729 0.0031 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS04855 51e100ef5b39a9d9e2607a489d5aa47b 740 Pfam PF00395 S-layer homology domain 621 661 5.2E-9 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS11840 5da047c302348516757132f74149993e 424 PIRSF PIRSF000243 1 424 3.7E-102 T 25-04-2017 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CLFO_RS11840 5da047c302348516757132f74149993e 424 Gene3D G3DSA:1.10.780.10 134 320 6.5E-15 T 25-04-2017 CLFO_RS11840 5da047c302348516757132f74149993e 424 Pfam PF02335 Cytochrome c552 58 420 9.7E-103 T 25-04-2017 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CLFO_RS11840 5da047c302348516757132f74149993e 424 Gene3D G3DSA:1.20.140.10 321 422 5.3E-29 T 25-04-2017 CLFO_RS11840 5da047c302348516757132f74149993e 424 SUPERFAMILY SSF48695 54 421 8.39E-119 T 25-04-2017 IPR011031 Multihaem cytochrome CLFO_RS09390 c9b710d9bcb0caac9a87c547aaff3ea4 148 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 143 6.0E-7 T 25-04-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLFO_RS09390 c9b710d9bcb0caac9a87c547aaff3ea4 148 SUPERFAMILY SSF54593 4 145 5.24E-19 T 25-04-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLFO_RS09390 c9b710d9bcb0caac9a87c547aaff3ea4 148 Gene3D G3DSA:3.10.180.10 4 146 7.7E-28 T 25-04-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLFO_RS11100 a730e41d30d3da4db48f59c722530810 124 TIGRFAM TIGR02530 flg_new: flagellar operon protein 29 124 7.5E-33 T 25-04-2017 IPR013367 Flagellar, putative CLFO_RS11100 a730e41d30d3da4db48f59c722530810 124 Pfam PF12611 Protein of unknown function (DUF3766) 100 123 1.7E-11 T 25-04-2017 IPR013367 Flagellar, putative CLFO_RS02900 5a293203bc5e15605b7c743b8ccbe804 275 Pfam PF03180 NLPA lipoprotein 34 261 9.9E-77 T 25-04-2017 IPR004872 Lipoprotein NlpA family CLFO_RS02900 5a293203bc5e15605b7c743b8ccbe804 275 SUPERFAMILY SSF53850 33 261 1.54E-65 T 25-04-2017 CLFO_RS02900 5a293203bc5e15605b7c743b8ccbe804 275 PIRSF PIRSF002854 1 263 5.3E-80 T 25-04-2017 IPR004872 Lipoprotein NlpA family CLFO_RS02900 5a293203bc5e15605b7c743b8ccbe804 275 Gene3D G3DSA:3.40.190.10 32 162 7.2E-45 T 25-04-2017 CLFO_RS16030 a27b03cecaf7341b99d68163456b42e8 209 Pfam PF08241 Methyltransferase domain 50 149 2.8E-21 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS16030 a27b03cecaf7341b99d68163456b42e8 209 Gene3D G3DSA:3.40.50.150 24 209 2.5E-37 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS16030 a27b03cecaf7341b99d68163456b42e8 209 SUPERFAMILY SSF53335 29 197 1.2E-36 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS14735 df113e4d21d9159b05632993e31d3e41 319 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 203 269 3.0E-15 T 25-04-2017 CLFO_RS14735 df113e4d21d9159b05632993e31d3e41 319 SUPERFAMILY SSF55166 192 276 8.24E-15 T 25-04-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 CLFO_RS03675 6e8d637ac167739142962b823e9f96e9 115 Gene3D G3DSA:3.30.70.120 6 115 3.9E-41 T 25-04-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLFO_RS03675 6e8d637ac167739142962b823e9f96e9 115 ProSitePatterns PS00638 P-II protein C-terminal region signature. 86 99 - T 25-04-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CLFO_RS03675 6e8d637ac167739142962b823e9f96e9 115 SUPERFAMILY SSF54913 6 115 4.17E-38 T 25-04-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLFO_RS03675 6e8d637ac167739142962b823e9f96e9 115 Pfam PF00543 Nitrogen regulatory protein P-II 7 108 6.5E-37 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS03675 6e8d637ac167739142962b823e9f96e9 115 PRINTS PR00340 P-II protein signature 55 78 5.5E-33 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS03675 6e8d637ac167739142962b823e9f96e9 115 PRINTS PR00340 P-II protein signature 5 20 5.5E-33 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS03675 6e8d637ac167739142962b823e9f96e9 115 PRINTS PR00340 P-II protein signature 26 44 5.5E-33 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS03675 6e8d637ac167739142962b823e9f96e9 115 PRINTS PR00340 P-II protein signature 86 106 5.5E-33 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS03675 6e8d637ac167739142962b823e9f96e9 115 SMART SM00938 7 108 6.2E-53 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS18330 38213fc897cb3a9737208778660c8c57 244 Pfam PF03773 Predicted permease 44 199 2.2E-16 T 25-04-2017 IPR005524 Predicted permease DUF318 CLFO_RS18330 38213fc897cb3a9737208778660c8c57 244 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 189 240 4.1E-5 T 25-04-2017 CLFO_RS18330 38213fc897cb3a9737208778660c8c57 244 SUPERFAMILY SSF54862 184 241 2.39E-5 T 25-04-2017 CLFO_RS18330 38213fc897cb3a9737208778660c8c57 244 Gene3D G3DSA:3.30.70.20 183 240 1.2E-7 T 25-04-2017 CLFO_RS08570 9106930799144ad1fda072ea3e347ece 379 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 57 206 3.4E-42 T 25-04-2017 IPR004474 Cell envelope-related transcriptional attenuator domain CLFO_RS08570 9106930799144ad1fda072ea3e347ece 379 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 292 375 9.5E-13 T 25-04-2017 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain CLFO_RS08570 9106930799144ad1fda072ea3e347ece 379 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 57 206 1.7E-40 T 25-04-2017 IPR004474 Cell envelope-related transcriptional attenuator domain CLFO_RS11435 b1adce97c96e6d2a2940da276f774346 93 Hamap MF_01503 UPF0296 protein . 3 87 29.861 T 25-04-2017 IPR007169 Uncharacterised protein family UPF0296 CLFO_RS11435 b1adce97c96e6d2a2940da276f774346 93 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 78 7.0E-35 T 25-04-2017 IPR007169 Uncharacterised protein family UPF0296 CLFO_RS11435 b1adce97c96e6d2a2940da276f774346 93 Pfam PF04025 Domain of unknown function (DUF370) 5 77 6.4E-38 T 25-04-2017 IPR007169 Uncharacterised protein family UPF0296 CLFO_RS00120 4fd86128616d3bd18595d3f1a7235368 906 Hamap MF_01600 UPF0182 protein . 1 845 18.495 T 25-04-2017 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 CLFO_RS00120 4fd86128616d3bd18595d3f1a7235368 906 Pfam PF03699 Uncharacterised protein family (UPF0182) 3 769 6.7E-277 T 25-04-2017 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 CLFO_RS07765 56dea7c185407c4fc301348fb5679084 116 Pfam PF05717 IS66 Orf2 like protein 9 104 1.3E-34 T 25-04-2017 IPR008878 Transposase IS66, Orf2 CLFO_RS02350 3f69b1ddfd77adf875150d7596ec90ee 211 SUPERFAMILY SSF53335 27 167 2.22E-11 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS02350 3f69b1ddfd77adf875150d7596ec90ee 211 Gene3D G3DSA:3.40.50.150 30 175 1.5E-10 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS10340 13c33ac69ccacb4103d88a2a7672e155 113 Pfam PF05635 23S rRNA-intervening sequence protein 3 107 1.2E-12 T 25-04-2017 IPR012657 23S rRNA-intervening sequence protein CLFO_RS10340 13c33ac69ccacb4103d88a2a7672e155 113 SUPERFAMILY SSF158446 3 113 7.19E-11 T 25-04-2017 CLFO_RS10340 13c33ac69ccacb4103d88a2a7672e155 113 Gene3D G3DSA:1.20.1440.60 3 113 1.4E-6 T 25-04-2017 IPR012657 23S rRNA-intervening sequence protein CLFO_RS08755 48997aecc273d4c47fa524a40ce0c47d 133 SMART SM00507 69 123 9.8E-12 T 25-04-2017 IPR003615 HNH nuclease CLFO_RS08755 48997aecc273d4c47fa524a40ce0c47d 133 Pfam PF01844 HNH endonuclease 82 127 1.4E-10 T 25-04-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CLFO_RS13710 c722977745b3c5cd4a80f903c2bdd060 393 Pfam PF00155 Aminotransferase class I and II 40 385 1.1E-35 T 25-04-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CLFO_RS13710 c722977745b3c5cd4a80f903c2bdd060 393 SUPERFAMILY SSF53383 2 391 4.49E-103 T 25-04-2017 IPR015424 Pyridoxal phosphate-dependent transferase CLFO_RS13710 c722977745b3c5cd4a80f903c2bdd060 393 Gene3D G3DSA:3.40.640.10 58 273 2.6E-79 T 25-04-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CLFO_RS13710 c722977745b3c5cd4a80f903c2bdd060 393 Gene3D G3DSA:3.90.1150.10 274 390 7.8E-12 T 25-04-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CLFO_RS03430 1e90952dac9871e280ec06762b57f81c 171 Pfam PF05593 RHS Repeat 137 169 7.3E-7 T 25-04-2017 IPR031325 RHS repeat CLFO_RS03430 1e90952dac9871e280ec06762b57f81c 171 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 137 169 2.0E-4 T 25-04-2017 IPR006530 YD repeat CLFO_RS03495 63946b208fb226ce3a852ded0bf3089a 304 Pfam PF05598 Transposase domain (DUF772) 69 137 1.6E-17 T 25-04-2017 IPR008490 Transposase InsH, N-terminal CLFO_RS10560 e3733e6007fbe261fad4c48e6359884b 128 Pfam PF06356 Protein of unknown function (DUF1064) 16 124 9.8E-35 T 25-04-2017 IPR009414 Protein of unknown function DUF1064 CLFO_RS10560 e3733e6007fbe261fad4c48e6359884b 128 Pfam PF09520 Type II restriction endonuclease, TdeIII 15 117 1.3E-5 T 25-04-2017 IPR019045 Restriction endonuclease, type II, TdeIII GO:0003677|GO:0009036|GO:0009307 CLFO_RS21390 7cc9a981a45af279d2bc47c5f4bdabce 257 SUPERFAMILY SSF52540 1 253 6.33E-72 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21390 7cc9a981a45af279d2bc47c5f4bdabce 257 Pfam PF13614 AAA domain 3 178 7.7E-71 T 25-04-2017 IPR025669 AAA domain CLFO_RS21390 7cc9a981a45af279d2bc47c5f4bdabce 257 Gene3D G3DSA:3.40.50.300 3 254 1.5E-77 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS07835 b0dca0561574c815904756f8112cb533 163 Pfam PF02293 AmiS/UreI family transporter 5 155 2.0E-10 T 25-04-2017 IPR003211 AmiS/UreI transporter GO:0006810|GO:0016020 CLFO_RS20000 5f2d2e9a6b8e2d6ac211eb6ef65b05d4 126 SUPERFAMILY SSF51230 52 125 5.63E-25 T 25-04-2017 IPR011053 Single hybrid motif CLFO_RS20000 5f2d2e9a6b8e2d6ac211eb6ef65b05d4 126 Pfam PF00364 Biotin-requiring enzyme 59 124 4.9E-21 T 25-04-2017 IPR000089 Biotin/lipoyl attachment CLFO_RS20000 5f2d2e9a6b8e2d6ac211eb6ef65b05d4 126 Gene3D G3DSA:2.40.50.100 55 125 2.0E-28 T 25-04-2017 CLFO_RS20000 5f2d2e9a6b8e2d6ac211eb6ef65b05d4 126 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 82 99 - T 25-04-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CLFO_RS13755 61cc0316c5651a54c5e1d5b7b6ebba89 383 Gene3D G3DSA:3.40.50.1980 53 188 2.6E-16 T 25-04-2017 CLFO_RS13755 61cc0316c5651a54c5e1d5b7b6ebba89 383 Pfam PF01497 Periplasmic binding protein 123 319 2.1E-19 T 25-04-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CLFO_RS13755 61cc0316c5651a54c5e1d5b7b6ebba89 383 SUPERFAMILY SSF53807 58 379 3.85E-50 T 25-04-2017 CLFO_RS13755 61cc0316c5651a54c5e1d5b7b6ebba89 383 Gene3D G3DSA:3.40.50.1980 190 358 3.1E-31 T 25-04-2017 CLFO_RS05010 8ddd09ed8a7fe20694652a8cf9fc14b6 274 Pfam PF00795 Carbon-nitrogen hydrolase 5 256 5.7E-67 T 25-04-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CLFO_RS05010 8ddd09ed8a7fe20694652a8cf9fc14b6 274 SUPERFAMILY SSF56317 1 264 2.09E-86 T 25-04-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CLFO_RS05010 8ddd09ed8a7fe20694652a8cf9fc14b6 274 Gene3D G3DSA:3.60.110.10 1 271 1.7E-98 T 25-04-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CLFO_RS15455 2b056566c3e2cf57083e85bba09595a1 229 SUPERFAMILY SSF56300 1 216 8.58E-25 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS15455 2b056566c3e2cf57083e85bba09595a1 229 Pfam PF00149 Calcineurin-like phosphoesterase 4 195 5.1E-16 T 25-04-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CLFO_RS15455 2b056566c3e2cf57083e85bba09595a1 229 Gene3D G3DSA:3.60.21.10 159 227 1.7E-48 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS15455 2b056566c3e2cf57083e85bba09595a1 229 Gene3D G3DSA:3.60.21.10 1 121 1.7E-48 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS15455 2b056566c3e2cf57083e85bba09595a1 229 PIRSF PIRSF033094 1 229 2.3E-98 T 25-04-2017 IPR014578 Predicted phosphoesterase, CT488 type CLFO_RS13250 f015866f809e78a8b6a8ed36e8910210 112 Pfam PF10400 Virulence activator alpha C-term 33 108 9.8E-10 T 25-04-2017 IPR018309 Transcription regulator PadR, C-terminal CLFO_RS13250 f015866f809e78a8b6a8ed36e8910210 112 SUPERFAMILY SSF46785 5 110 2.58E-12 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13670 54ca9a63f1455602669b6473dc18260e 413 Pfam PF04165 Protein of unknown function (DUF401) 12 408 4.1E-25 T 25-04-2017 IPR007294 Protein of unknown function DUF401 CLFO_RS08015 34c5c54c21a36396a5ddc44f64148d15 116 Pfam PF05717 IS66 Orf2 like protein 9 104 9.3E-35 T 25-04-2017 IPR008878 Transposase IS66, Orf2 CLFO_RS04720 34c5c54c21a36396a5ddc44f64148d15 116 Pfam PF05717 IS66 Orf2 like protein 9 104 9.3E-35 T 25-04-2017 IPR008878 Transposase IS66, Orf2 CLFO_RS06675 cf78cae0618abd3c457b9a0920a82845 422 SUPERFAMILY SSF117892 188 326 1.14E-11 T 25-04-2017 IPR001107 Band 7 domain CLFO_RS06675 cf78cae0618abd3c457b9a0920a82845 422 Pfam PF01145 SPFH domain / Band 7 family 165 336 1.1E-15 T 25-04-2017 IPR001107 Band 7 domain CLFO_RS15295 a14ff4ebe7e6b9dc82cc3696736252cf 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 333 3.7E-17 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS12910 4ae4e941e28e56d3e5454ccfb2d685fd 316 SUPERFAMILY SSF161098 96 295 1.23E-19 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12910 4ae4e941e28e56d3e5454ccfb2d685fd 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 310 4.2E-36 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12910 4ae4e941e28e56d3e5454ccfb2d685fd 316 Gene3D G3DSA:1.10.3720.10 92 304 2.2E-21 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS20090 51bc7ea6105dc9219b8238afe3eab3b5 141 Pfam PF09148 Domain of unknown function (DUF1934) 7 138 7.9E-36 T 25-04-2017 IPR015231 Protein of unknown function DUF1934 CLFO_RS20090 51bc7ea6105dc9219b8238afe3eab3b5 141 SUPERFAMILY SSF50814 13 139 1.71E-26 T 25-04-2017 IPR011038 Calycin-like CLFO_RS20090 51bc7ea6105dc9219b8238afe3eab3b5 141 Gene3D G3DSA:2.40.128.20 1 140 1.9E-34 T 25-04-2017 IPR012674 Calycin CLFO_RS02005 a7f43938ba535265ce0b90b58a78219a 445 PIRSF PIRSF005353 1 445 2.5E-187 T 25-04-2017 IPR026033 Purine permease PbuG-like CLFO_RS02005 a7f43938ba535265ce0b90b58a78219a 445 Pfam PF00860 Permease family 22 404 2.6E-44 T 25-04-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLFO_RS09970 f942f85f629a9462e9f21621ecd8a613 98 Pfam PF08666 SAF domain 12 87 2.0E-15 T 25-04-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 CLFO_RS09970 f942f85f629a9462e9f21621ecd8a613 98 SMART SM00858 12 87 5.3E-12 T 25-04-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 CLFO_RS08395 85c0d334401805bf7b2167d03b2bc8ca 116 Gene3D G3DSA:3.40.1390.20 2 111 8.2E-14 T 25-04-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CLFO_RS08395 85c0d334401805bf7b2167d03b2bc8ca 116 Pfam PF07085 DRTGG domain 7 108 5.9E-6 T 25-04-2017 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CLFO_RS08395 85c0d334401805bf7b2167d03b2bc8ca 116 SUPERFAMILY SSF75138 3 111 4.32E-18 T 25-04-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CLFO_RS05670 97c329062f4ec6c1ff3f605e06c7c2d6 228 Pfam PF12654 Domain of unknown function (DUF3786) 27 202 3.9E-53 T 25-04-2017 IPR024264 Domain of unknown function DUF3786 CLFO_RS06965 37751f614ee6c958ebed51901111e86b 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 214 8.6E-28 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS06965 37751f614ee6c958ebed51901111e86b 229 Gene3D G3DSA:1.10.3720.10 5 212 7.6E-49 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS06965 37751f614ee6c958ebed51901111e86b 229 SUPERFAMILY SSF161098 6 214 1.15E-51 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS06965 37751f614ee6c958ebed51901111e86b 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 9 216 8.0E-77 T 25-04-2017 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CLFO_RS19505 ba63e74655bb9dab0e89c31c06feefb9 123 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 18 117 6.6E-17 T 25-04-2017 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV CLFO_RS00990 acfaf5ec815f05de0943b0c471791395 135 Pfam PF03899 ATP synthase I chain 12 106 3.3E-11 T 25-04-2017 IPR005598 ATP synthase protein I CLFO_RS13845 c15dca99fc12b59eb0f69442e2a0a503 75 Gene3D G3DSA:3.30.110.40 2 73 2.0E-19 T 25-04-2017 IPR001455 TusA-like domain CLFO_RS13845 c15dca99fc12b59eb0f69442e2a0a503 75 Pfam PF01206 Sulfurtransferase TusA 5 73 2.8E-19 T 25-04-2017 IPR001455 TusA-like domain CLFO_RS13845 c15dca99fc12b59eb0f69442e2a0a503 75 SUPERFAMILY SSF64307 4 73 5.89E-19 T 25-04-2017 IPR001455 TusA-like domain CLFO_RS17015 4cc4788c85c6d34fa8135936e25ed122 425 SUPERFAMILY SSF69255 266 335 3.14E-7 T 25-04-2017 CLFO_RS17015 4cc4788c85c6d34fa8135936e25ed122 425 Gene3D G3DSA:2.40.50.230 270 335 3.3E-7 T 25-04-2017 IPR006531 Gp5 N-terminal CLFO_RS17015 4cc4788c85c6d34fa8135936e25ed122 425 SUPERFAMILY SSF69279 4 164 1.13E-13 T 25-04-2017 CLFO_RS08275 2e509666969fd7eeb95665f91c04fcc6 121 Pfam PF01925 Sulfite exporter TauE/SafE 3 109 7.1E-19 T 25-04-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 CLFO_RS20585 cb38ed0290b7f88eeadb14864940dd78 250 SUPERFAMILY SSF52518 16 231 5.65E-55 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS20585 cb38ed0290b7f88eeadb14864940dd78 250 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 59 207 1.0E-25 T 25-04-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CLFO_RS20585 cb38ed0290b7f88eeadb14864940dd78 250 Gene3D G3DSA:3.40.50.970 18 231 7.2E-57 T 25-04-2017 IPR029061 Thiamin diphosphate-binding fold CLFO_RS11020 bfdb0dc8cfb0bb34b73171665e4cdbe5 297 SUPERFAMILY SSF52540 32 280 7.5E-52 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS11020 bfdb0dc8cfb0bb34b73171665e4cdbe5 297 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 35 221 5.6E-31 T 25-04-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLFO_RS11020 bfdb0dc8cfb0bb34b73171665e4cdbe5 297 PIRSF PIRSF003092 1 297 6.9E-91 T 25-04-2017 IPR025501 ATP binding protein MinD CLFO_RS11020 bfdb0dc8cfb0bb34b73171665e4cdbe5 297 Gene3D G3DSA:3.40.50.300 31 274 2.4E-58 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS04200 2a107d85b8dc8e12aa68211d6af89084 172 Pfam PF07155 ECF-type riboflavin transporter, S component 6 168 1.6E-48 T 25-04-2017 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 CLFO_RS04035 1b480a97075c57b7eb9301a9bc29d006 142 Gene3D G3DSA:1.20.1260.10 14 141 7.5E-35 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS04035 1b480a97075c57b7eb9301a9bc29d006 142 SUPERFAMILY SSF47240 16 142 8.13E-31 T 25-04-2017 IPR009078 Ferritin-like superfamily CLFO_RS04035 1b480a97075c57b7eb9301a9bc29d006 142 Pfam PF02915 Rubrerythrin 23 135 9.4E-14 T 25-04-2017 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CLFO_RS21305 2f24abfee5a8a93973a90b2f1324844d 375 Gene3D G3DSA:1.10.260.40 9 116 1.1E-9 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS21305 2f24abfee5a8a93973a90b2f1324844d 375 Pfam PF01381 Helix-turn-helix 13 65 1.7E-8 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS21305 2f24abfee5a8a93973a90b2f1324844d 375 SMART SM00530 12 67 2.3E-6 T 25-04-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CLFO_RS21305 2f24abfee5a8a93973a90b2f1324844d 375 SUPERFAMILY SSF47413 6 68 1.94E-9 T 25-04-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CLFO_RS04870 f14e773983c1c86007db507e16f3a5a8 372 SUPERFAMILY SSF56524 45 174 2.49E-14 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS04870 f14e773983c1c86007db507e16f3a5a8 372 Pfam PF00174 Oxidoreductase molybdopterin binding domain 79 172 8.9E-6 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS04870 f14e773983c1c86007db507e16f3a5a8 372 Gene3D G3DSA:3.90.420.10 44 175 2.5E-7 T 25-04-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CLFO_RS07825 2651f79e42a98524696adc2b3f235909 523 Gene3D G3DSA:3.20.20.80 304 518 3.5E-42 T 25-04-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CLFO_RS07825 2651f79e42a98524696adc2b3f235909 523 SUPERFAMILY SSF51445 260 505 6.18E-41 T 25-04-2017 IPR017853 Glycoside hydrolase superfamily CLFO_RS07825 2651f79e42a98524696adc2b3f235909 523 Pfam PF02156 Glycosyl hydrolase family 26 296 437 3.2E-18 T 25-04-2017 IPR022790 Glycosyl hydrolase family 26 domain GO:0004553 CLFO_RS11305 0a083ae77e14196e7412538168c8d26f 174 Pfam PF02620 Uncharacterized ACR, COG1399 56 170 2.7E-28 T 25-04-2017 IPR003772 Protein of unknown function DUF177 CLFO_RS01850 187e1e17642363cbe378da1c34a90e8d 402 Pfam PF12704 MacB-like periplasmic core domain 21 243 9.9E-27 T 25-04-2017 IPR025857 MacB-like periplasmic core domain CLFO_RS01850 187e1e17642363cbe378da1c34a90e8d 402 Pfam PF02687 FtsX-like permease family 283 395 6.8E-21 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS05795 2500cfa9c54614eb3a8b97af108dda25 302 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 285 1.9E-51 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS05795 2500cfa9c54614eb3a8b97af108dda25 302 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 7 298 4.4E-122 T 25-04-2017 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type CLFO_RS16185 2b1f50982e6d05fab15b7afbe69cb0f4 261 PIRSF PIRSF006648 2 257 1.3E-24 T 25-04-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CLFO_RS16185 2b1f50982e6d05fab15b7afbe69cb0f4 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 180 199 1.2E-5 T 25-04-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CLFO_RS16185 2b1f50982e6d05fab15b7afbe69cb0f4 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 143 167 1.2E-5 T 25-04-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CLFO_RS16185 2b1f50982e6d05fab15b7afbe69cb0f4 261 Pfam PF01061 ABC-2 type transporter 13 222 3.8E-23 T 25-04-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CLFO_RS11645 c4a972052e037977fc2362ee003a3c95 405 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 116 320 1.7E-55 T 25-04-2017 IPR010897 Sporulation stage II, protein P CLFO_RS11645 c4a972052e037977fc2362ee003a3c95 405 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 140 323 8.0E-51 T 25-04-2017 IPR010897 Sporulation stage II, protein P CLFO_RS10845 68fece9af8001f1e71df575289149847 243 Gene3D G3DSA:3.20.20.370 15 241 3.8E-55 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS10845 68fece9af8001f1e71df575289149847 243 SUPERFAMILY SSF88713 33 241 1.25E-52 T 25-04-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLFO_RS10845 68fece9af8001f1e71df575289149847 243 Pfam PF01522 Polysaccharide deacetylase 69 174 3.3E-27 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS12865 936b797b04b378a6891da1d8b37e2de6 348 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 346 2.9E-146 T 25-04-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CLFO_RS12865 936b797b04b378a6891da1d8b37e2de6 348 SUPERFAMILY SSF51658 1 342 1.45E-83 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS12865 936b797b04b378a6891da1d8b37e2de6 348 Gene3D G3DSA:3.20.20.150 1 346 2.7E-143 T 25-04-2017 IPR013022 Xylose isomerase-like, TIM barrel domain CLFO_RS12865 936b797b04b378a6891da1d8b37e2de6 348 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 348 162.075 T 25-04-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CLFO_RS12865 936b797b04b378a6891da1d8b37e2de6 348 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 145 346 4.4E-62 T 25-04-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CLFO_RS18750 67ef06efbf4766666ade81755c28264c 617 Pfam PF06527 TniQ 4 160 1.6E-21 T 25-04-2017 IPR009492 TniQ CLFO_RS18750 67ef06efbf4766666ade81755c28264c 617 Pfam PF15978 Tn7-like transposition protein D 203 570 2.7E-119 T 25-04-2017 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl CLFO_RS01820 283d8b3351af86c61db12e9f2c564142 604 Gene3D G3DSA:3.40.50.300 167 270 8.8E-23 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01820 283d8b3351af86c61db12e9f2c564142 604 Gene3D G3DSA:3.40.50.300 66 116 8.8E-23 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS01820 283d8b3351af86c61db12e9f2c564142 604 Pfam PF00350 Dynamin family 76 233 1.3E-19 T 25-04-2017 IPR022812 Dynamin superfamily CLFO_RS01820 283d8b3351af86c61db12e9f2c564142 604 SUPERFAMILY SSF52540 56 273 4.39E-28 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12025 29f4a19f2c3f51708fe890f8141410f3 206 SUPERFAMILY SSF102198 1 205 1.06E-51 T 25-04-2017 CLFO_RS12025 29f4a19f2c3f51708fe890f8141410f3 206 Pfam PF04199 Putative cyclase 4 149 3.9E-21 T 25-04-2017 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734 CLFO_RS12025 29f4a19f2c3f51708fe890f8141410f3 206 Gene3D G3DSA:3.50.30.50 1 204 3.8E-53 T 25-04-2017 CLFO_RS02210 2a11ba65bfae3e18c639635599b61455 365 PIRSF PIRSF019466 1 365 1.1E-154 T 25-04-2017 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 CLFO_RS02210 2a11ba65bfae3e18c639635599b61455 365 Pfam PF04346 Ethanolamine utilisation protein, EutH 3 353 1.5E-158 T 25-04-2017 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 CLFO_RS17885 544c2319a76e2f1c159accfe744aa5c4 116 PIRSF PIRSF033490 1 113 1.4E-38 T 25-04-2017 IPR003477 mRNA interferase PemK-like protein GO:0003677 CLFO_RS17885 544c2319a76e2f1c159accfe744aa5c4 116 Gene3D G3DSA:2.30.30.110 2 113 1.0E-49 T 25-04-2017 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLFO_RS17885 544c2319a76e2f1c159accfe744aa5c4 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 110 8.0E-35 T 25-04-2017 IPR003477 mRNA interferase PemK-like protein GO:0003677 CLFO_RS17885 544c2319a76e2f1c159accfe744aa5c4 116 SUPERFAMILY SSF50118 2 113 3.76E-44 T 25-04-2017 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLFO_RS13720 016aa2b6de22a4658eaee3a819ead07a 173 Gene3D G3DSA:3.40.50.300 1 160 6.9E-53 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13720 016aa2b6de22a4658eaee3a819ead07a 173 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 4 158 1.4E-42 T 25-04-2017 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CLFO_RS13720 016aa2b6de22a4658eaee3a819ead07a 173 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 4 134 1.6E-43 T 25-04-2017 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CLFO_RS13720 016aa2b6de22a4658eaee3a819ead07a 173 SUPERFAMILY SSF52540 2 158 1.07E-21 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS20170 9a0375a6dc3b019055d7195b4c32b6a9 145 Gene3D G3DSA:1.10.10.10 13 144 1.9E-29 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20170 9a0375a6dc3b019055d7195b4c32b6a9 145 SUPERFAMILY SSF46785 17 142 4.36E-26 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS20170 9a0375a6dc3b019055d7195b4c32b6a9 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 6.5E-6 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS20170 9a0375a6dc3b019055d7195b4c32b6a9 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 6.5E-6 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS20170 9a0375a6dc3b019055d7195b4c32b6a9 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 6.5E-6 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS20170 9a0375a6dc3b019055d7195b4c32b6a9 145 SMART SM00347 27 127 2.2E-20 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS20170 9a0375a6dc3b019055d7195b4c32b6a9 145 Pfam PF01047 MarR family 34 92 5.3E-14 T 25-04-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CLFO_RS14105 2fb7bf34911b41fdbb2d0d2ae9858bd5 193 SMART SM00903 12 149 1.6E-11 T 25-04-2017 IPR002563 Flavin reductase like domain GO:0010181 CLFO_RS14105 2fb7bf34911b41fdbb2d0d2ae9858bd5 193 Pfam PF01613 Flavin reductase like domain 12 149 5.8E-21 T 25-04-2017 IPR002563 Flavin reductase like domain GO:0010181 CLFO_RS14105 2fb7bf34911b41fdbb2d0d2ae9858bd5 193 SUPERFAMILY SSF50475 8 164 1.23E-41 T 25-04-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CLFO_RS14105 2fb7bf34911b41fdbb2d0d2ae9858bd5 193 Gene3D G3DSA:2.30.110.10 7 175 1.9E-47 T 25-04-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CLFO_RS14040 443f4b448c12c3d65438df3c84b7e1d1 789 SUPERFAMILY SSF51998 5 788 2.9E-236 T 25-04-2017 CLFO_RS14040 443f4b448c12c3d65438df3c84b7e1d1 789 Pfam PF02901 Pyruvate formate lyase-like 5 652 3.6E-234 T 25-04-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 CLFO_RS14040 443f4b448c12c3d65438df3c84b7e1d1 789 Pfam PF01228 Glycine radical 669 770 2.2E-31 T 25-04-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CLFO_RS14040 443f4b448c12c3d65438df3c84b7e1d1 789 Gene3D G3DSA:3.20.70.20 3 788 1.9E-257 T 25-04-2017 CLFO_RS03080 37cf720541b1d32220c0595112b75b5e 142 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 4 92 2.0E-15 T 25-04-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CLFO_RS03080 37cf720541b1d32220c0595112b75b5e 142 Gene3D G3DSA:3.30.70.140 3 93 1.0E-27 T 25-04-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CLFO_RS03080 37cf720541b1d32220c0595112b75b5e 142 Gene3D G3DSA:2.30.30.20 94 139 1.0E-14 T 25-04-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CLFO_RS03080 37cf720541b1d32220c0595112b75b5e 142 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 2 90 8.5E-27 T 25-04-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CLFO_RS03080 37cf720541b1d32220c0595112b75b5e 142 SUPERFAMILY SSF54893 1 93 1.31E-28 T 25-04-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CLFO_RS03080 37cf720541b1d32220c0595112b75b5e 142 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 95 138 4.3E-12 T 25-04-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CLFO_RS03080 37cf720541b1d32220c0595112b75b5e 142 SUPERFAMILY SSF57825 95 140 6.67E-13 T 25-04-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CLFO_RS05205 c74b0d6769cc8eadb9dd8348fd2fbc63 303 Pfam PF00892 EamA-like transporter family 153 286 2.1E-20 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS05205 c74b0d6769cc8eadb9dd8348fd2fbc63 303 Pfam PF00892 EamA-like transporter family 12 140 2.9E-16 T 25-04-2017 IPR000620 EamA domain GO:0016020|GO:0016021 CLFO_RS05205 c74b0d6769cc8eadb9dd8348fd2fbc63 303 SUPERFAMILY SSF103481 41 144 7.06E-15 T 25-04-2017 CLFO_RS05205 c74b0d6769cc8eadb9dd8348fd2fbc63 303 SUPERFAMILY SSF103481 193 286 2.35E-13 T 25-04-2017 CLFO_RS21115 d91e51dfeecc1e6102fd86b1b4570c0d 311 Pfam PF09991 Predicted membrane protein (DUF2232) 19 298 5.0E-62 T 25-04-2017 IPR018710 Protein of unknown function DUF2232 CLFO_RS02435 a0fc20f4e895107c76cf700435b0a73d 377 SUPERFAMILY SSF53098 256 374 2.58E-6 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS02435 a0fc20f4e895107c76cf700435b0a73d 377 Pfam PF13936 Helix-turn-helix domain 11 50 9.3E-10 T 25-04-2017 IPR025246 Transposase IS30-like HTH domain CLFO_RS12550 9f980b7482e83516e05fb83278ca8e9a 497 Pfam PF03772 Competence protein 222 484 3.2E-55 T 25-04-2017 IPR004477 ComEC/Rec2-related protein CLFO_RS12550 9f980b7482e83516e05fb83278ca8e9a 497 Pfam PF13567 Domain of unknown function (DUF4131) 14 147 2.7E-6 T 25-04-2017 IPR025405 Domain of unknown function DUF4131 CLFO_RS12550 9f980b7482e83516e05fb83278ca8e9a 497 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 243 410 6.6E-29 T 25-04-2017 IPR004477 ComEC/Rec2-related protein CLFO_RS21205 ef20caddeedb8452ff91ab5c7b716b3d 250 Pfam PF07285 Protein of unknown function (DUF1444) 39 202 1.3E-9 T 25-04-2017 IPR010838 Protein of unknown unction DUF1444 CLFO_RS10345 36c9a5bf049bad1a197b49478a6533e8 342 Gene3D G3DSA:3.90.1580.10 82 209 1.0E-9 T 25-04-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 CLFO_RS10345 36c9a5bf049bad1a197b49478a6533e8 342 Gene3D G3DSA:3.90.1580.10 298 338 1.0E-9 T 25-04-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 CLFO_RS10345 36c9a5bf049bad1a197b49478a6533e8 342 SUPERFAMILY SSF56436 294 338 2.59E-18 T 25-04-2017 IPR016187 C-type lectin fold CLFO_RS10345 36c9a5bf049bad1a197b49478a6533e8 342 SUPERFAMILY SSF56436 27 196 2.59E-18 T 25-04-2017 IPR016187 C-type lectin fold CLFO_RS10345 36c9a5bf049bad1a197b49478a6533e8 342 Pfam PF03781 Sulfatase-modifying factor enzyme 1 82 188 2.3E-6 T 25-04-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 CLFO_RS05510 6cafc30c6d800ccd4db6415c6390bf12 449 Pfam PF02386 Cation transport protein 13 429 1.6E-68 T 25-04-2017 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CLFO_RS05510 6cafc30c6d800ccd4db6415c6390bf12 449 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 30 418 1.6E-113 T 25-04-2017 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CLFO_RS06650 8b52b3a157ab8fc9d14b9dfdd4985255 483 Pfam PF09660 Protein of unknown function (DUF2397) 24 336 1.2E-111 T 25-04-2017 IPR013493 Conserved hypothetical protein CHP02677 CLFO_RS06650 8b52b3a157ab8fc9d14b9dfdd4985255 483 TIGRFAM TIGR02677 TIGR02677: TIGR02677 family protein 22 334 4.7E-71 T 25-04-2017 IPR013493 Conserved hypothetical protein CHP02677 CLFO_RS06650 8b52b3a157ab8fc9d14b9dfdd4985255 483 Pfam PF09661 Protein of unknown function (DUF2398) 333 466 3.8E-23 T 25-04-2017 IPR013494 Conserved hypothetical protein CHP02678 CLFO_RS15670 a34729096b01462c221c27cb92888554 410 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 296 3.9E-16 T 25-04-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLFO_RS15670 a34729096b01462c221c27cb92888554 410 Gene3D G3DSA:2.40.50.100 57 76 5.4E-15 T 25-04-2017 CLFO_RS15670 a34729096b01462c221c27cb92888554 410 Gene3D G3DSA:2.40.50.100 216 247 5.4E-15 T 25-04-2017 CLFO_RS15670 a34729096b01462c221c27cb92888554 410 Gene3D G3DSA:2.40.50.100 77 135 3.6E-4 T 25-04-2017 CLFO_RS15670 a34729096b01462c221c27cb92888554 410 SUPERFAMILY SSF51230 53 103 1.01E-7 T 25-04-2017 IPR011053 Single hybrid motif CLFO_RS09805 879c28ff7322ee9ec2885269a33dbdc5 363 Pfam PF12982 Protein of unknown function (DUF3866) 32 350 8.2E-133 T 25-04-2017 IPR024479 Protein of unknown function DUF3866 CLFO_RS07380 d4c4fd6ff8586fe00922889910b94415 403 Pfam PF04860 Phage portal protein 33 376 6.2E-87 T 25-04-2017 IPR006944 Bacteriophage/Gene transfer agent portal protein CLFO_RS07380 d4c4fd6ff8586fe00922889910b94415 403 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 24 381 4.9E-73 T 25-04-2017 IPR006427 Phage portal protein, HK97 CLFO_RS07775 5f6c4a85b2466ddffb3da90a1cad5ded 59 Pfam PF05717 IS66 Orf2 like protein 11 59 2.1E-16 T 25-04-2017 IPR008878 Transposase IS66, Orf2 CLFO_RS10175 3a47c3d8111b673150a9b73013037006 285 Pfam PF13700 Domain of unknown function (DUF4158) 7 171 3.8E-53 T 25-04-2017 IPR025296 Domain of unknown function DUF4158 CLFO_RS16400 8a45c3a56349e8dc62de549190f98a36 106 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 102 6.5E-24 T 25-04-2017 IPR008407 Branched-chain amino acid transport, AzlD CLFO_RS11675 0c6060db57ccf0cac5c1cbef913690f4 102 Gene3D G3DSA:2.30.30.240 1 77 4.3E-23 T 25-04-2017 CLFO_RS11675 0c6060db57ccf0cac5c1cbef913690f4 102 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 3 76 7.3E-28 T 25-04-2017 IPR014238 Sporulation protein YlmC/YmxH CLFO_RS11675 0c6060db57ccf0cac5c1cbef913690f4 102 Pfam PF05239 PRC-barrel domain 1 76 6.0E-12 T 25-04-2017 IPR027275 PRC-barrel domain CLFO_RS11675 0c6060db57ccf0cac5c1cbef913690f4 102 SUPERFAMILY SSF50346 1 74 8.63E-12 T 25-04-2017 IPR011033 PRC-barrel-like CLFO_RS04750 df25177d562e57d9c08c9e238cf1554f 225 Pfam PF00753 Metallo-beta-lactamase superfamily 21 181 5.5E-11 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS04750 df25177d562e57d9c08c9e238cf1554f 225 SMART SM00849 18 181 2.8E-29 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS04750 df25177d562e57d9c08c9e238cf1554f 225 Gene3D G3DSA:3.60.15.10 18 207 5.7E-50 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS04750 df25177d562e57d9c08c9e238cf1554f 225 SUPERFAMILY SSF56281 6 212 2.49E-43 T 25-04-2017 IPR001279 Metallo-beta-lactamase CLFO_RS08380 8789ade871cf01ea241b5e35e9bb56e1 296 SUPERFAMILY SSF110997 100 160 2.48E-5 T 25-04-2017 IPR007730 Sporulation-related domain GO:0042834 CLFO_RS00680 513314463a73559c7f8415e5c44efa30 628 Pfam PF00395 S-layer homology domain 174 211 1.2E-9 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS00680 513314463a73559c7f8415e5c44efa30 628 Pfam PF00395 S-layer homology domain 30 74 1.3E-5 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS03970 fb58fdbedd2c08f6dd3015885ee70a9f 393 Pfam PF07907 YibE/F-like protein 129 366 2.1E-76 T 25-04-2017 IPR012507 YibE/F-like CLFO_RS11690 e43ec49b5a1370a52d64f127371e4441 296 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 1 296 3.8E-76 T 25-04-2017 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 CLFO_RS11690 e43ec49b5a1370a52d64f127371e4441 296 Pfam PF03419 Sporulation factor SpoIIGA 3 295 2.9E-84 T 25-04-2017 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 CLFO_RS11690 e43ec49b5a1370a52d64f127371e4441 296 PIRSF PIRSF018571 1 296 1.1E-102 T 25-04-2017 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 CLFO_RS10375 f6e2238e675361ae6592e863e5eae1c5 154 Pfam PF10934 Protein of unknown function (DUF2634) 31 137 3.7E-38 T 25-04-2017 IPR020288 Protein of unknown function DUF2634 CLFO_RS10375 f6e2238e675361ae6592e863e5eae1c5 154 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 54 139 5.0E-43 T 25-04-2017 IPR020288 Protein of unknown function DUF2634 CLFO_RS20120 02e789fdfc0a35a65f2cfda59b0e82b9 527 PIRSF PIRSF005690 17 518 1.1E-180 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS20120 02e789fdfc0a35a65f2cfda59b0e82b9 527 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 38 502 4.8E-191 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS07470 2e9f458b3e8fe533492108bbc3a93396 270 Pfam PF01391 Collagen triple helix repeat (20 copies) 136 178 5.8E-8 T 25-04-2017 IPR008160 Collagen triple helix repeat CLFO_RS07470 2e9f458b3e8fe533492108bbc3a93396 270 Pfam PF01391 Collagen triple helix repeat (20 copies) 51 90 1.5E-7 T 25-04-2017 IPR008160 Collagen triple helix repeat CLFO_RS12965 11f12d9c101dc0fc1055ec4a3e416099 201 Pfam PF02342 TerD domain 2 201 1.3E-73 T 25-04-2017 IPR003325 TerD domain GO:0006950 CLFO_RS12965 11f12d9c101dc0fc1055ec4a3e416099 201 Gene3D G3DSA:2.60.60.30 18 193 8.7E-63 T 25-04-2017 CLFO_RS07400 8241f3e8e4b4293e4092b28833087bd9 109 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 31 105 1.7E-7 T 25-04-2017 IPR008767 Bacteriophage SPP1, head-tail adaptor CLFO_RS07400 8241f3e8e4b4293e4092b28833087bd9 109 Pfam PF05521 Phage head-tail joining protein 7 103 4.3E-14 T 25-04-2017 IPR008767 Bacteriophage SPP1, head-tail adaptor CLFO_RS15755 4466ff87e633b7aa0e340dd98e3acf2c 191 Pfam PF12952 Domain of unknown function (DUF3841) 13 188 2.3E-57 T 25-04-2017 IPR024211 Protein of unknown function DUF3841 CLFO_RS07040 a6165f6da5448b8b684cf60aac3c64de 216 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 214 5.8E-67 T 25-04-2017 IPR005744 Hly-III GO:0016021|GO:0019835 CLFO_RS07040 a6165f6da5448b8b684cf60aac3c64de 216 Pfam PF03006 Haemolysin-III related 10 207 1.7E-43 T 25-04-2017 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CLFO_RS03535 771d352c235ab152cb1441d90e12a003 118 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 2 111 2.2E-37 T 25-04-2017 IPR018745 Domain of unknown function DUF2294 CLFO_RS16500 2c8ef0bd238768e3fde67776adfdfa50 218 Pfam PF00936 BMC domain 3 80 2.0E-23 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS16500 2c8ef0bd238768e3fde67776adfdfa50 218 SUPERFAMILY SSF143414 1 96 3.79E-29 T 25-04-2017 CLFO_RS16500 2c8ef0bd238768e3fde67776adfdfa50 218 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 48 5.0E-14 T 25-04-2017 CLFO_RS16500 2c8ef0bd238768e3fde67776adfdfa50 218 SMART SM00877 2 80 9.0E-31 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS00910 c9a0518987af24c511e1e8b57515f638 181 SUPERFAMILY SSF48371 22 163 9.98E-7 T 25-04-2017 IPR016024 Armadillo-type fold GO:0005488 CLFO_RS18800 a2db972bf0c4e86160f90841bf4de1e4 873 Gene3D G3DSA:3.40.50.300 205 241 1.6E-14 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18800 a2db972bf0c4e86160f90841bf4de1e4 873 Gene3D G3DSA:3.40.50.300 50 170 1.6E-14 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18800 a2db972bf0c4e86160f90841bf4de1e4 873 SUPERFAMILY SSF52540 343 412 1.24E-12 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18800 a2db972bf0c4e86160f90841bf4de1e4 873 SUPERFAMILY SSF52540 170 241 1.24E-12 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18800 a2db972bf0c4e86160f90841bf4de1e4 873 SUPERFAMILY SSF52540 48 103 1.24E-12 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18800 a2db972bf0c4e86160f90841bf4de1e4 873 Pfam PF04851 Type III restriction enzyme, res subunit 4 239 3.8E-16 T 25-04-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CLFO_RS20500 f5e8be16c1eb2808fa2abb107769bfc7 89 Gene3D G3DSA:3.30.70.260 1 89 2.5E-27 T 25-04-2017 CLFO_RS20500 f5e8be16c1eb2808fa2abb107769bfc7 89 Pfam PF13740 ACT domain 5 77 2.7E-13 T 25-04-2017 CLFO_RS20500 f5e8be16c1eb2808fa2abb107769bfc7 89 Hamap MF_01054 UPF0237 protein . 1 89 25.129 T 25-04-2017 IPR022986 Uncharacterised protein family UPF0237, ACT-type CLFO_RS20500 f5e8be16c1eb2808fa2abb107769bfc7 89 SUPERFAMILY SSF55021 1 83 1.48E-18 T 25-04-2017 CLFO_RS12980 be368afab2701fa5b67a1d0fa49a3f8b 541 Pfam PF14266 Putative component of 'biosynthetic module' 45 523 3.9E-137 T 25-04-2017 IPR025647 Putative component of 'biosynthetic module' CLFO_RS00975 378f80259a3fb2b5297845cc02e9516d 354 Pfam PF00953 Glycosyl transferase family 4 80 237 6.4E-43 T 25-04-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CLFO_RS00975 378f80259a3fb2b5297845cc02e9516d 354 ProSitePatterns PS01348 MraY family signature 2. 157 168 - T 25-04-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CLFO_RS15105 6d08e2400b4441349236c9f704441115 154 SUPERFAMILY SSF47240 2 150 1.08E-7 T 25-04-2017 IPR009078 Ferritin-like superfamily CLFO_RS15105 6d08e2400b4441349236c9f704441115 154 Gene3D G3DSA:1.20.1260.10 3 150 1.8E-8 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS14580 aacc9a9c79b4c15189ca0dbd85c45b48 140 SUPERFAMILY SSF117856 1 137 1.49E-36 T 25-04-2017 CLFO_RS14580 aacc9a9c79b4c15189ca0dbd85c45b48 140 PIRSF PIRSF016702 1 140 5.3E-47 T 25-04-2017 IPR025707 Predicted DNA-binding protein with PD1-like DNA-binding motif CLFO_RS14580 aacc9a9c79b4c15189ca0dbd85c45b48 140 Gene3D G3DSA:3.30.1330.80 1 139 1.4E-43 T 25-04-2017 CLFO_RS14580 aacc9a9c79b4c15189ca0dbd85c45b48 140 Pfam PF03479 Domain of unknown function (DUF296) 10 120 4.9E-22 T 25-04-2017 IPR005175 PPC domain CLFO_RS01760 c7b9a0053d67bd7c090b85cd7acc5404 229 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 11 194 2.6E-46 T 25-04-2017 IPR001303 Class II aldolase/adducin N-terminal CLFO_RS01760 c7b9a0053d67bd7c090b85cd7acc5404 229 SMART SM01007 7 195 1.4E-65 T 25-04-2017 IPR001303 Class II aldolase/adducin N-terminal CLFO_RS01760 c7b9a0053d67bd7c090b85cd7acc5404 229 SUPERFAMILY SSF53639 3 220 2.55E-67 T 25-04-2017 IPR001303 Class II aldolase/adducin N-terminal CLFO_RS01760 c7b9a0053d67bd7c090b85cd7acc5404 229 Gene3D G3DSA:3.40.225.10 3 228 1.4E-71 T 25-04-2017 IPR001303 Class II aldolase/adducin N-terminal CLFO_RS06610 a0f5a62191181733c91e21585b9e3eca 340 Pfam PF04245 37-kD nucleoid-associated bacterial protein 13 336 6.5E-54 T 25-04-2017 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CLFO_RS10445 7ddb5107c21ea5aee57d5d6dcbe2e5a6 136 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 20 125 1.1E-6 T 25-04-2017 IPR011231 Bacteriophage VT1-Sakai, H0018 CLFO_RS02820 51ed31f65866933a08e27ff9138846d3 101 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 3 91 1.2E-17 T 25-04-2017 IPR016772 Uncharacterised conserved protein UCP020408 CLFO_RS02820 51ed31f65866933a08e27ff9138846d3 101 PIRSF PIRSF020408 1 100 9.1E-34 T 25-04-2017 IPR016772 Uncharacterised conserved protein UCP020408 CLFO_RS15895 7047d0f9c49d0e4afcdccf96ab0add0d 529 Gene3D G3DSA:3.40.190.10 143 288 3.5E-49 T 25-04-2017 CLFO_RS15895 7047d0f9c49d0e4afcdccf96ab0add0d 529 SUPERFAMILY SSF53850 43 528 2.48E-131 T 25-04-2017 CLFO_RS15895 7047d0f9c49d0e4afcdccf96ab0add0d 529 PIRSF PIRSF002741 1 527 1.1E-112 T 25-04-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CLFO_RS15895 7047d0f9c49d0e4afcdccf96ab0add0d 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 441 3.7E-93 T 25-04-2017 IPR000914 Solute-binding protein family 5 domain CLFO_RS15895 7047d0f9c49d0e4afcdccf96ab0add0d 529 Gene3D G3DSA:3.10.105.10 289 498 1.1E-57 T 25-04-2017 CLFO_RS13525 7a2176c8f4da6eba470aa6c9ec4500f4 280 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 234 3.6E-59 T 25-04-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CLFO_RS13525 7a2176c8f4da6eba470aa6c9ec4500f4 280 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 2 239 13.847 T 25-04-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CLFO_RS13525 7a2176c8f4da6eba470aa6c9ec4500f4 280 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 240 3.7E-46 T 25-04-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CLFO_RS02190 51135178a8e8f81057712a2d7b5824fc 231 PIRSF PIRSF034981 1 230 5.2E-7 T 25-04-2017 IPR013372 Ethanolamine utilization, putative CLFO_RS16340 43a45e5a6e4808588dec138f74162de8 389 SUPERFAMILY SSF51726 152 388 2.38E-36 T 25-04-2017 CLFO_RS16340 43a45e5a6e4808588dec138f74162de8 389 SUPERFAMILY SSF51726 12 111 2.38E-36 T 25-04-2017 CLFO_RS16340 43a45e5a6e4808588dec138f74162de8 389 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 167 385 3.2E-15 T 25-04-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CLFO_RS16340 43a45e5a6e4808588dec138f74162de8 389 Gene3D G3DSA:3.20.20.210 148 387 2.7E-28 T 25-04-2017 CLFO_RS16340 43a45e5a6e4808588dec138f74162de8 389 Gene3D G3DSA:3.20.20.210 5 116 2.7E-28 T 25-04-2017 CLFO_RS05385 8a99db98054914cd892efe33e4f4eb57 63 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 16 52 4.8E-9 T 25-04-2017 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLFO_RS05385 8a99db98054914cd892efe33e4f4eb57 63 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 17 26 - T 25-04-2017 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLFO_RS12120 d7a3946661138989764c64b34a5f4297 354 SUPERFAMILY SSF53756 296 346 9.42E-34 T 25-04-2017 CLFO_RS12120 d7a3946661138989764c64b34a5f4297 354 SUPERFAMILY SSF53756 11 266 9.42E-34 T 25-04-2017 CLFO_RS12120 d7a3946661138989764c64b34a5f4297 354 Pfam PF13439 Glycosyltransferase Family 4 13 161 4.5E-14 T 25-04-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CLFO_RS12705 fb8c9aa8a645b515caed3ef8587e7ce9 691 Pfam PF07705 CARDB 293 384 1.3E-7 T 25-04-2017 IPR011635 CARDB domain CLFO_RS04310 bef0923da5bea696ef5101383d591984 333 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 2 228 6.4E-57 T 25-04-2017 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLFO_RS19460 c3dc204f3e969e38579583c607b7adc8 185 Pfam PF13302 Acetyltransferase (GNAT) domain 15 156 2.9E-26 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS19460 c3dc204f3e969e38579583c607b7adc8 185 SUPERFAMILY SSF55729 8 181 6.42E-47 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS19460 c3dc204f3e969e38579583c607b7adc8 185 Gene3D G3DSA:3.40.630.30 7 181 1.5E-47 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS03840 801fcd0d0454c70d0b3e1d9e7be9c9bb 163 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 156 7.6E-32 T 25-04-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CLFO_RS11485 ca02c53d178cb34b08a53cb1b2235928 152 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 2 31 1.1E-15 T 25-04-2017 IPR019933 DivIVA domain CLFO_RS11485 ca02c53d178cb34b08a53cb1b2235928 152 Pfam PF05103 DivIVA protein 2 132 1.7E-48 T 25-04-2017 IPR007793 DivIVA family CLFO_RS11220 e53aabd983dfd9a59616ccc5ba49e757 75 Hamap MF_00088 UPF0109 protein . 1 75 24.214 T 25-04-2017 IPR020627 Uncharacterised protein family UPF0109 CLFO_RS11220 e53aabd983dfd9a59616ccc5ba49e757 75 Pfam PF13083 KH domain 3 74 3.5E-25 T 25-04-2017 CLFO_RS11220 e53aabd983dfd9a59616ccc5ba49e757 75 SUPERFAMILY SSF54814 5 61 2.75E-8 T 25-04-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 CLFO_RS11220 e53aabd983dfd9a59616ccc5ba49e757 75 Gene3D G3DSA:3.30.300.120 15 72 3.7E-7 T 25-04-2017 CLFO_RS03310 f4abb97643bed33bc710aa5455c5e43d 60 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 20 29 - T 25-04-2017 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 CLFO_RS03310 f4abb97643bed33bc710aa5455c5e43d 60 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 6 54 3.8E-17 T 25-04-2017 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLFO_RS16745 049b292e4def6ffa4e9b97d53c500bb2 120 Pfam PF10710 Protein of unknown function (DUF2512) 5 109 2.1E-17 T 25-04-2017 IPR019649 Protein of unknown function DUF2512 CLFO_RS15170 8c3e88ad3f7013a15d8ba46df498f765 363 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 360 2.5E-69 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS15170 8c3e88ad3f7013a15d8ba46df498f765 363 Pfam PF03845 Spore germination protein 10 328 2.1E-67 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS11625 1dd04d54357a2b31fd1b9a0829fedb35 152 Pfam PF11385 Protein of unknown function (DUF3189) 3 148 1.2E-50 T 25-04-2017 IPR021525 Protein of unknown function DUF3189 CLFO_RS15315 cbc605d2b7be149ca16716b32d6e93fc 382 Gene3D G3DSA:3.40.50.300 159 247 4.9E-4 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15315 cbc605d2b7be149ca16716b32d6e93fc 382 Gene3D G3DSA:3.40.50.300 284 367 4.9E-4 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15315 cbc605d2b7be149ca16716b32d6e93fc 382 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 37 382 1.1E-92 T 25-04-2017 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLFO_RS07800 44fe0326e2b996ffeb1eeef862f0f6ce 259 Pfam PF01758 Sodium Bile acid symporter family 8 158 2.0E-18 T 25-04-2017 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CLFO_RS07625 e3cd7d8e7015f861ceea89492237eafb 65 Pfam PF11213 Protein of unknown function (DUF3006) 3 64 9.5E-25 T 25-04-2017 IPR021377 Protein of unknown function DUF3006 CLFO_RS15970 ad726bc78b9a7644fc21193b7548d93c 243 Pfam PF05949 Bacterial protein of unknown function (DUF881) 90 235 4.3E-39 T 25-04-2017 IPR010273 Protein of unknown function DUF881 CLFO_RS13010 5817605d81a63367f8aef6c7e7b46c43 306 Pfam PF02361 Cobalt transport protein 12 220 2.3E-8 T 25-04-2017 IPR003339 ABC/ECF transporter, transmembrane component CLFO_RS15490 c275ea37c358ed045ca82a35b864d5d7 428 Pfam PF09861 Domain of unknown function (DUF2088) 8 205 8.0E-75 T 25-04-2017 IPR018657 Domain of unknown function DUF2088 CLFO_RS20110 77f2a319f9fc3eb9b10fa3951a1afb22 368 Pfam PF03845 Spore germination protein 7 327 2.7E-65 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS20110 77f2a319f9fc3eb9b10fa3951a1afb22 368 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 6 361 1.2E-76 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS08780 e59b9707fb2cd7116cc96df692f48f51 418 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 38 385 1.0E-88 T 25-04-2017 IPR006427 Phage portal protein, HK97 CLFO_RS08780 e59b9707fb2cd7116cc96df692f48f51 418 Pfam PF04860 Phage portal protein 42 381 1.6E-88 T 25-04-2017 IPR006944 Bacteriophage/Gene transfer agent portal protein CLFO_RS04280 48cfacc878d9afc67cfa1fe1e0a832e2 395 PIRSF PIRSF036593 5 389 1.7E-191 T 25-04-2017 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit CLFO_RS04280 48cfacc878d9afc67cfa1fe1e0a832e2 395 Gene3D G3DSA:3.40.718.10 29 71 1.8E-4 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS04280 48cfacc878d9afc67cfa1fe1e0a832e2 395 Gene3D G3DSA:3.40.718.10 81 296 3.6E-28 T 25-04-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CLFO_RS04280 48cfacc878d9afc67cfa1fe1e0a832e2 395 Pfam PF02504 Fatty acid synthesis protein 32 368 1.1E-70 T 25-04-2017 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CLFO_RS04280 48cfacc878d9afc67cfa1fe1e0a832e2 395 SUPERFAMILY SSF53659 31 294 1.44E-24 T 25-04-2017 CLFO_RS01500 156dc2102e738865f7a1f6ad8e388045 233 Pfam PF08889 WbqC-like protein family 8 223 5.7E-64 T 25-04-2017 IPR014985 WbqC-like protein family CLFO_RS17965 7ab352a7b254e4794783270df087e5e8 173 PIRSF PIRSF019239 7 169 4.6E-40 T 25-04-2017 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CLFO_RS17965 7ab352a7b254e4794783270df087e5e8 173 Pfam PF01899 Na+/H+ ion antiporter subunit 17 156 8.2E-34 T 25-04-2017 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CLFO_RS19320 e63de1ecbc358bae40d8c0cae344768d 121 Pfam PF07784 Protein of unknown function (DUF1622) 30 101 5.3E-18 T 25-04-2017 IPR012427 Protein of unknown function DUF1622 CLFO_RS14420 e6702f93d46ee4a5bf8392354b8439ed 170 TIGRFAM TIGR02271 TIGR02271: conserved domain 31 140 1.2E-29 T 25-04-2017 IPR019060 Domain of unknown function DUF2382 CLFO_RS14420 e6702f93d46ee4a5bf8392354b8439ed 170 Pfam PF09557 Domain of unknown function (DUF2382) 31 135 2.3E-24 T 25-04-2017 IPR019060 Domain of unknown function DUF2382 CLFO_RS09455 a22f1c1911c934f466245e1f7bd55c89 783 Pfam PF05569 BlaR1 peptidase M56 11 287 3.5E-56 T 25-04-2017 IPR008756 Peptidase M56 CLFO_RS18630 62476692de303d00cea4271551a8829f 414 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 6 410 4.4E-129 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS18630 62476692de303d00cea4271551a8829f 414 PIRSF PIRSF006066 1 414 2.8E-146 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS18630 62476692de303d00cea4271551a8829f 414 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 1 403 6.1E-113 T 25-04-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLFO_RS20960 aabd4e86491b912acdf510580cce61b3 55 Pfam PF14116 YyzF-like protein 4 55 6.1E-20 T 25-04-2017 IPR025626 YyzF-like protein CLFO_RS20960 aabd4e86491b912acdf510580cce61b3 55 TIGRFAM TIGR04129 CxxH_BA5709: CxxH/CxxC protein, BA_5709 family 2 54 9.1E-18 T 25-04-2017 IPR025626 YyzF-like protein CLFO_RS07450 33836501080cc9a4e3fb42ae3f69ee94 148 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 54 140 3.0E-18 T 25-04-2017 IPR020288 Protein of unknown function DUF2634 CLFO_RS07450 33836501080cc9a4e3fb42ae3f69ee94 148 Pfam PF10934 Protein of unknown function (DUF2634) 27 134 6.8E-30 T 25-04-2017 IPR020288 Protein of unknown function DUF2634 CLFO_RS08960 c51ba4369964445bcc7d8e46f73bdacf 167 SUPERFAMILY SSF51161 6 164 2.77E-47 T 25-04-2017 IPR011004 Trimeric LpxA-like CLFO_RS08960 c51ba4369964445bcc7d8e46f73bdacf 167 Gene3D G3DSA:2.160.10.10 6 165 6.8E-46 T 25-04-2017 CLFO_RS08960 c51ba4369964445bcc7d8e46f73bdacf 167 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 121 2.0E-7 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS08960 c51ba4369964445bcc7d8e46f73bdacf 167 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 44 4.6E-5 T 25-04-2017 IPR001451 Hexapeptide repeat CLFO_RS20690 da9d478206ef39059c44099bdd0c5ed0 406 Pfam PF07690 Major Facilitator Superfamily 21 231 2.1E-20 T 25-04-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CLFO_RS20690 da9d478206ef39059c44099bdd0c5ed0 406 Gene3D G3DSA:1.20.1250.20 8 196 4.3E-23 T 25-04-2017 CLFO_RS20690 da9d478206ef39059c44099bdd0c5ed0 406 SUPERFAMILY SSF103473 7 393 2.35E-55 T 25-04-2017 IPR020846 Major facilitator superfamily domain CLFO_RS20690 da9d478206ef39059c44099bdd0c5ed0 406 Gene3D G3DSA:1.20.1250.20 214 392 2.0E-19 T 25-04-2017 CLFO_RS02685 eeff7ac151e2fe9b4792b857d1cbdb64 279 Pfam PF01882 Protein of unknown function DUF58 36 110 5.7E-15 T 25-04-2017 IPR002881 Domain of unknown function DUF58 CLFO_RS08390 38025ebf98976302bd6ad708774b2615 144 Gene3D G3DSA:3.30.565.10 21 137 6.1E-12 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS08390 38025ebf98976302bd6ad708774b2615 144 SUPERFAMILY SSF55874 39 137 8.49E-11 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS08390 38025ebf98976302bd6ad708774b2615 144 Pfam PF13581 Histidine kinase-like ATPase domain 20 131 9.6E-9 T 25-04-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLFO_RS17695 6bd67a80dd23be8e2290a496d8061831 376 Pfam PF01551 Peptidase family M23 274 369 8.3E-36 T 25-04-2017 IPR016047 Peptidase M23 CLFO_RS17695 6bd67a80dd23be8e2290a496d8061831 376 Gene3D G3DSA:2.70.70.10 225 374 4.4E-54 T 25-04-2017 CLFO_RS17695 6bd67a80dd23be8e2290a496d8061831 376 SUPERFAMILY SSF51261 200 372 4.5E-61 T 25-04-2017 IPR011055 Duplicated hybrid motif CLFO_RS00470 e3d0c392e7eadd3d8b5122bf439cfbf0 334 Pfam PF01699 Sodium/calcium exchanger protein 5 152 3.8E-16 T 25-04-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CLFO_RS00470 e3d0c392e7eadd3d8b5122bf439cfbf0 334 Pfam PF01699 Sodium/calcium exchanger protein 184 331 2.2E-15 T 25-04-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CLFO_RS09180 4c4b341791322689e424ea576d66ff07 236 Pfam PF11316 Putative rhamnosyl transferase 28 213 2.8E-6 T 25-04-2017 IPR021466 Putative rhamnosyl transferase CLFO_RS05685 fe2b444904dac2b8e06b9d3df6a7eaf2 62 Pfam PF10133 Predicted RNA-binding protein 1 59 8.4E-23 T 25-04-2017 IPR019300 RNA-binding protein, predicted CLFO_RS01210 ae742c4ffdd29c6f51a74184ea7897de 50 Pfam PF09388 Spo0E like sporulation regulatory protein 5 44 4.3E-8 T 25-04-2017 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 CLFO_RS01210 ae742c4ffdd29c6f51a74184ea7897de 50 SUPERFAMILY SSF140500 3 46 2.75E-7 T 25-04-2017 CLFO_RS17405 d38c9ecd6a4771163db5d604d17ac351 328 Gene3D G3DSA:1.10.10.10 48 119 4.5E-4 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS13765 c6f289c9564126c59e134f2fc5674564 231 Gene3D G3DSA:3.40.50.300 1 161 2.3E-9 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13765 c6f289c9564126c59e134f2fc5674564 231 SUPERFAMILY SSF52540 4 174 7.13E-20 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS13765 c6f289c9564126c59e134f2fc5674564 231 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 162 9.3E-12 T 25-04-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLFO_RS08705 75659defe1e52e16d4971a176bc1382f 442 Gene3D G3DSA:3.40.50.300 6 146 1.1E-6 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS12055 8ee75a21803c542c3b497645569ef427 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 241 3.4E-16 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12055 8ee75a21803c542c3b497645569ef427 254 SUPERFAMILY SSF161098 55 235 3.79E-24 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS12055 8ee75a21803c542c3b497645569ef427 254 Gene3D G3DSA:1.10.3720.10 53 247 7.2E-17 T 25-04-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CLFO_RS06790 e2ed972c8d34b1df4670319248456f1b 87 Gene3D G3DSA:3.40.50.300 42 78 1.3E-4 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS06790 e2ed972c8d34b1df4670319248456f1b 87 Gene3D G3DSA:3.40.630.30 2 41 1.4E-7 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS06790 e2ed972c8d34b1df4670319248456f1b 87 SUPERFAMILY SSF55729 7 59 5.4E-5 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS03685 90f4e009b39e594bcea11a89ea6ffce1 242 Pfam PF02308 MgtC family 11 139 6.4E-40 T 25-04-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLFO_RS03685 90f4e009b39e594bcea11a89ea6ffce1 242 PRINTS PR01837 MgtC/SapB protein signature 14 33 4.6E-45 T 25-04-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLFO_RS03685 90f4e009b39e594bcea11a89ea6ffce1 242 PRINTS PR01837 MgtC/SapB protein signature 33 51 4.6E-45 T 25-04-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLFO_RS03685 90f4e009b39e594bcea11a89ea6ffce1 242 PRINTS PR01837 MgtC/SapB protein signature 93 117 4.6E-45 T 25-04-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLFO_RS03685 90f4e009b39e594bcea11a89ea6ffce1 242 PRINTS PR01837 MgtC/SapB protein signature 66 88 4.6E-45 T 25-04-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CLFO_RS04565 c329441499d29c193c9013507e3af62e 174 Gene3D G3DSA:3.30.1330.20 19 109 1.8E-34 T 25-04-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 CLFO_RS04565 c329441499d29c193c9013507e3af62e 174 SUPERFAMILY SSF143555 3 137 4.71E-48 T 25-04-2017 CLFO_RS04565 c329441499d29c193c9013507e3af62e 174 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 136 171 2.9E-9 T 25-04-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CLFO_RS04565 c329441499d29c193c9013507e3af62e 174 Pfam PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon 12 121 7.8E-33 T 25-04-2017 IPR003814 Formylmethanofuran dehydrogenase, subunit E domain CLFO_RS02955 b01b3289248bbedf42d86872a1b3ae49 77 ProDom PD019268 UVIB BACTERIOCIN BHLA PLASMID ANTIBIOTIC HOLIN-LIKE PRECURSOR ANTIMICROBIAL SIGNAL PROPHAGE-DERIVED 1 74 1.0E-16 T 25-04-2017 IPR024405 Prophage protein BhlA/UviB CLFO_RS02955 b01b3289248bbedf42d86872a1b3ae49 77 Pfam PF10960 BhlA holin family 2 70 6.7E-29 T 25-04-2017 IPR024405 Prophage protein BhlA/UviB CLFO_RS17360 602d66bd43f6d3cb4b8776fa8f028f85 70 Pfam PF12750 Maff2 family 1 70 3.1E-38 T 25-04-2017 IPR024272 MAFF2-related CLFO_RS18635 32559fd0ac50343f24d79dd57f88b7db 178 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 32 162 1.2E-30 T 25-04-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CLFO_RS14215 98eb5acad2b9e6398ae5a7c923d322e6 64 SUPERFAMILY SSF143422 7 53 9.81E-8 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS19330 480845a311b13c4e0702cd25e5045fda 250 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 30 247 1.1E-35 T 25-04-2017 IPR015402 Protein of unknown function DUF1980 CLFO_RS19330 480845a311b13c4e0702cd25e5045fda 250 Pfam PF09323 Domain of unknown function (DUF1980) 13 112 9.9E-11 T 25-04-2017 IPR015402 Protein of unknown function DUF1980 CLFO_RS08045 8334a670f91ee14479ec0b6768f2ec3b 141 Pfam PF06114 Domain of unknown function (DUF955) 23 117 5.7E-15 T 25-04-2017 IPR010359 HTH domain, IrrE-type CLFO_RS08920 95299685273d4f2e334d17eb0a998871 69 Pfam PF11146 Protein of unknown function (DUF2905) 5 67 6.0E-25 T 25-04-2017 IPR021320 Protein of unknown function DUF2905 CLFO_RS18340 4348f6238f0a710458e160e41863b814 108 SUPERFAMILY SSF51182 14 102 7.39E-15 T 25-04-2017 IPR011051 RmlC-like cupin domain CLFO_RS18340 4348f6238f0a710458e160e41863b814 108 Gene3D G3DSA:2.60.120.10 9 104 7.6E-9 T 25-04-2017 IPR014710 RmlC-like jelly roll fold CLFO_RS09305 1eb5ea177cfc5daa2bd95db90a01d379 233 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 230 3.4E-64 T 25-04-2017 IPR005224 Sugar fermentation stimulation protein CLFO_RS09305 1eb5ea177cfc5daa2bd95db90a01d379 233 Pfam PF03749 Sugar fermentation stimulation protein 16 223 8.9E-69 T 25-04-2017 IPR005224 Sugar fermentation stimulation protein CLFO_RS09305 1eb5ea177cfc5daa2bd95db90a01d379 233 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 3 232 46.251 T 25-04-2017 IPR005224 Sugar fermentation stimulation protein CLFO_RS08765 a38234920bd87fd394f5062fa3e23685 153 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 38 141 3.2E-17 T 25-04-2017 IPR006448 Putative phage terminase, small subunit, P27 family CLFO_RS08765 a38234920bd87fd394f5062fa3e23685 153 Pfam PF05119 Phage terminase, small subunit 47 128 8.8E-13 T 25-04-2017 IPR006448 Putative phage terminase, small subunit, P27 family CLFO_RS00875 11689bb9abf4cf3b5de1904a72ecc580 461 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 52 71 2.1E-16 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS00875 11689bb9abf4cf3b5de1904a72ecc580 461 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 23 44 2.1E-16 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS00875 11689bb9abf4cf3b5de1904a72ecc580 461 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 320 340 2.1E-16 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS00875 11689bb9abf4cf3b5de1904a72ecc580 461 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 98 124 2.1E-16 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS00875 11689bb9abf4cf3b5de1904a72ecc580 461 Pfam PF00209 Sodium:neurotransmitter symporter family 15 133 4.9E-29 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS00875 11689bb9abf4cf3b5de1904a72ecc580 461 Pfam PF00209 Sodium:neurotransmitter symporter family 158 454 1.4E-38 T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS00875 11689bb9abf4cf3b5de1904a72ecc580 461 SUPERFAMILY SSF161070 15 457 3.66E-143 T 25-04-2017 CLFO_RS00875 11689bb9abf4cf3b5de1904a72ecc580 461 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 39 53 - T 25-04-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CLFO_RS00235 1d97f03a60046ab404c1578922771572 100 Pfam PF02583 Metal-sensitive transcriptional repressor 19 97 1.2E-27 T 25-04-2017 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CLFO_RS16445 a6d5b0cb00ce50a00356170459060b8c 433 Gene3D G3DSA:3.40.50.720 81 206 1.7E-5 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS16445 a6d5b0cb00ce50a00356170459060b8c 433 Pfam PF10100 Uncharacterized protein conserved in bacteria (DUF2338) 5 429 1.8E-182 T 25-04-2017 IPR016935 Protein of unknown function DUF2338 CLFO_RS02825 56ef79581c51fac4d5200afffe0f05ff 199 Pfam PF12672 Protein of unknown function (DUF3793) 24 190 3.0E-33 T 25-04-2017 IPR024523 Protein of unknown function DUF3793 CLFO_RS15205 7e5f3444faae078fa8aba5f628db2779 228 Pfam PF12698 ABC-2 family transporter protein 46 222 2.0E-16 T 25-04-2017 CLFO_RS06985 e803ccda6a776acfca5a7851044571b4 128 SMART SM00938 4 120 9.7E-41 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS06985 e803ccda6a776acfca5a7851044571b4 128 SUPERFAMILY SSF54913 1 127 1.18E-29 T 25-04-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLFO_RS06985 e803ccda6a776acfca5a7851044571b4 128 Gene3D G3DSA:3.30.70.120 1 127 1.1E-35 T 25-04-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLFO_RS06985 e803ccda6a776acfca5a7851044571b4 128 PRINTS PR00340 P-II protein signature 67 90 8.4E-23 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS06985 e803ccda6a776acfca5a7851044571b4 128 PRINTS PR00340 P-II protein signature 23 41 8.4E-23 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS06985 e803ccda6a776acfca5a7851044571b4 128 PRINTS PR00340 P-II protein signature 2 17 8.4E-23 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS06985 e803ccda6a776acfca5a7851044571b4 128 PRINTS PR00340 P-II protein signature 98 118 8.4E-23 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS06985 e803ccda6a776acfca5a7851044571b4 128 Pfam PF00543 Nitrogen regulatory protein P-II 4 120 2.2E-30 T 25-04-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CLFO_RS06985 e803ccda6a776acfca5a7851044571b4 128 ProSitePatterns PS00638 P-II protein C-terminal region signature. 98 111 - T 25-04-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CLFO_RS05005 39287aa1afcf3e084623fc6f59db14c1 241 Gene3D G3DSA:3.40.1130.10 42 222 3.4E-34 T 25-04-2017 CLFO_RS05005 39287aa1afcf3e084623fc6f59db14c1 241 SUPERFAMILY SSF69593 56 238 4.32E-44 T 25-04-2017 CLFO_RS05005 39287aa1afcf3e084623fc6f59db14c1 241 SMART SM00563 74 188 7.0E-33 T 25-04-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CLFO_RS05005 39287aa1afcf3e084623fc6f59db14c1 241 Pfam PF01553 Acyltransferase 60 185 2.1E-30 T 25-04-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CLFO_RS05005 39287aa1afcf3e084623fc6f59db14c1 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 59 186 2.6E-37 T 25-04-2017 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 CLFO_RS15765 9cc119a37665e439f2be5a04c52da593 126 Pfam PF13799 Domain of unknown function (DUF4183) 38 110 3.6E-17 T 25-04-2017 IPR025237 Domain of unknown function DUF4183 CLFO_RS11835 350f532f936d3073ba26e90c1df78034 426 Pfam PF05140 ResB-like family 17 410 2.2E-43 T 25-04-2017 IPR007816 ResB-like domain CLFO_RS04955 b5dae7c0a594142f2c467517f2901da4 81 Pfam PF04023 FeoA domain 7 78 4.6E-16 T 25-04-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLFO_RS04955 b5dae7c0a594142f2c467517f2901da4 81 SUPERFAMILY SSF50037 11 79 2.44E-17 T 25-04-2017 IPR008988 Transcriptional repressor, C-terminal CLFO_RS04955 b5dae7c0a594142f2c467517f2901da4 81 SMART SM00899 6 78 1.4E-18 T 25-04-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CLFO_RS03215 26c177f05e7a9465969d54b587a026c0 248 SUPERFAMILY SSF53335 5 248 1.24E-42 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS03215 26c177f05e7a9465969d54b587a026c0 248 Pfam PF13649 Methyltransferase domain 38 136 1.9E-19 T 25-04-2017 CLFO_RS03215 26c177f05e7a9465969d54b587a026c0 248 Gene3D G3DSA:3.40.50.150 5 248 1.3E-35 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS07460 74bcc3b00816d9ea421f3e02aa946197 179 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 3 148 5.5E-36 T 25-04-2017 IPR018755 Bacteriophage Mu, Gp48 CLFO_RS17935 60da95300f1cc69dd23cf95e1dd244d7 126 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 14 116 1.5E-25 T 25-04-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CLFO_RS07710 a634439b4b84ce63b7209a13ada68f9a 421 TIGRFAM TIGR01538 portal_SPP1: phage portal protein, SPP1 family 3 409 1.4E-59 T 25-04-2017 IPR006428 Portal protein, SPP1-type CLFO_RS07710 a634439b4b84ce63b7209a13ada68f9a 421 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 14 411 7.3E-85 T 25-04-2017 IPR021145 Portal protein, SPP1 Gp6-like CLFO_RS02610 ff8a7fd8b9a3aebee1c87f6f4d5bda27 423 Pfam PF09861 Domain of unknown function (DUF2088) 38 177 1.1E-7 T 25-04-2017 IPR018657 Domain of unknown function DUF2088 CLFO_RS20645 c3a1644356afd4dbea28c41edafeae4a 200 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 31 158 3.6E-27 T 25-04-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CLFO_RS16800 b037a78b869c1cab0e70b1493a72e0c6 129 Pfam PF12787 EcsC protein family 2 114 6.5E-19 T 25-04-2017 IPR024787 EcsC protein CLFO_RS00815 c90774127ed3c7b28d61a49f01034f5e 188 Pfam PF06338 ComK protein 18 151 1.1E-8 T 25-04-2017 IPR010461 Competence protein ComK GO:0030420 CLFO_RS03650 b9da45958b4e093df758efd26788b907 155 SUPERFAMILY SSF55729 4 152 6.78E-12 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS03650 b9da45958b4e093df758efd26788b907 155 Gene3D G3DSA:3.40.630.30 2 145 6.2E-12 T 25-04-2017 IPR016181 Acyl-CoA N-acyltransferase CLFO_RS03650 b9da45958b4e093df758efd26788b907 155 Pfam PF00583 Acetyltransferase (GNAT) family 48 131 1.2E-6 T 25-04-2017 IPR000182 GNAT domain GO:0008080 CLFO_RS01170 4a1ba8bbf7d0dff35e900b24f6bc2235 303 Pfam PF14305 TupA-like ATPgrasp 59 298 1.5E-59 T 25-04-2017 IPR029465 TupA-like ATPgrasp protein CLFO_RS18875 cec280db86695bf42e7f154ec8debc96 223 Gene3D G3DSA:3.40.50.300 3 194 2.9E-14 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS18875 cec280db86695bf42e7f154ec8debc96 223 SUPERFAMILY SSF52540 3 199 1.17E-13 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS16840 d2e9849ca3127755d79b005aa390cc96 141 SMART SM01321 1 85 7.5E-15 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS16840 d2e9849ca3127755d79b005aa390cc96 141 Gene3D G3DSA:3.30.70.1290 3 88 2.9E-8 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS16840 d2e9849ca3127755d79b005aa390cc96 141 SUPERFAMILY SSF143422 3 90 3.53E-17 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS16840 d2e9849ca3127755d79b005aa390cc96 141 Pfam PF01797 Transposase IS200 like 4 85 2.8E-9 T 25-04-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS10755 2038042912e78f5a89d662b386bec816 124 Pfam PF03551 Transcriptional regulator PadR-like family 25 95 1.8E-15 T 25-04-2017 IPR005149 Transcription regulator PadR, N-terminal CLFO_RS10755 2038042912e78f5a89d662b386bec816 124 SUPERFAMILY SSF46785 14 105 9.1E-23 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10755 2038042912e78f5a89d662b386bec816 124 Gene3D G3DSA:1.10.10.10 5 121 4.6E-27 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS02805 eda8522b79de16b8205df4bab20ae76e 237 Pfam PF02361 Cobalt transport protein 16 205 6.3E-16 T 25-04-2017 IPR003339 ABC/ECF transporter, transmembrane component CLFO_RS20535 216b44fd00e75e739a3e3561b58b8996 386 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 2 381 2.8E-152 T 25-04-2017 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CLFO_RS04730 6448f53fb894d11d58c43c5b0fe14e6f 397 Pfam PF01757 Acyltransferase family 13 368 7.9E-34 T 25-04-2017 IPR002656 Acyltransferase 3 GO:0016747 CLFO_RS08670 5211e90db38c1cd241527b4c5fc6029e 68 Gene3D G3DSA:1.10.10.10 13 61 3.8E-4 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS18920 351a7c377c0c203725292cf1c44c84f7 360 Gene3D G3DSA:3.40.50.720 139 262 6.2E-15 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS18920 351a7c377c0c203725292cf1c44c84f7 360 SUPERFAMILY SSF51735 137 263 6.62E-14 T 25-04-2017 IPR016040 NAD(P)-binding domain CLFO_RS18920 351a7c377c0c203725292cf1c44c84f7 360 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 139 257 5.5E-13 T 25-04-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CLFO_RS16275 6b45060b39ed92a7483937ad65eaa0a6 308 SUPERFAMILY SSF53098 27 248 4.1E-14 T 25-04-2017 IPR012337 Ribonuclease H-like domain GO:0003676 CLFO_RS16275 6b45060b39ed92a7483937ad65eaa0a6 308 Pfam PF01609 Transposase DDE domain 62 235 3.7E-9 T 25-04-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CLFO_RS02165 ad89248d61efb5bb4569794a3572b9aa 178 SUPERFAMILY SSF143414 4 88 1.31E-26 T 25-04-2017 CLFO_RS02165 ad89248d61efb5bb4569794a3572b9aa 178 SMART SM00877 5 81 1.1E-30 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS02165 ad89248d61efb5bb4569794a3572b9aa 178 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 51 1.0E-16 T 25-04-2017 CLFO_RS02165 ad89248d61efb5bb4569794a3572b9aa 178 Pfam PF00936 BMC domain 6 81 3.8E-25 T 25-04-2017 IPR000249 Microcompartment protein, bacteria CLFO_RS02690 e5a134b5980585cd688d16721230ac0a 506 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 1 79 4.0E-8 T 25-04-2017 IPR011933 Double transmembrane domain CLFO_RS02690 e5a134b5980585cd688d16721230ac0a 506 Pfam PF07584 Aerotolerance regulator N-terminal 1 77 1.3E-16 T 25-04-2017 IPR024163 Aerotolerance regulator, N-terminal CLFO_RS01320 2838002ef96934891d225d82c891921c 74 Pfam PF07872 Protein of unknown function (DUF1659) 9 47 1.5E-9 T 25-04-2017 IPR012454 Protein of unknown function DUF1659 CLFO_RS15720 69a0875b01521de63e62d10db2e0526a 59 SUPERFAMILY SSF140500 2 45 2.22E-7 T 25-04-2017 CLFO_RS15720 69a0875b01521de63e62d10db2e0526a 59 Pfam PF09388 Spo0E like sporulation regulatory protein 2 38 2.0E-7 T 25-04-2017 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 CLFO_RS14085 bdb12d0ba659446f327cc4f4a496ae91 142 SUPERFAMILY SSF53474 18 138 5.42E-8 T 25-04-2017 IPR029058 Alpha/Beta hydrolase fold CLFO_RS14085 bdb12d0ba659446f327cc4f4a496ae91 142 Gene3D G3DSA:3.40.50.1820 16 138 2.7E-9 T 25-04-2017 IPR029058 Alpha/Beta hydrolase fold CLFO_RS17515 9602cbe8bd1327a7cc581bc4ae051ca2 389 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 184 385 4.5E-13 T 25-04-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CLFO_RS17515 9602cbe8bd1327a7cc581bc4ae051ca2 389 SUPERFAMILY SSF51726 16 385 4.36E-39 T 25-04-2017 CLFO_RS17515 9602cbe8bd1327a7cc581bc4ae051ca2 389 Gene3D G3DSA:3.20.20.210 163 385 5.1E-21 T 25-04-2017 CLFO_RS09170 9138157b2ca03e22393c60f4a2732498 330 Pfam PF00535 Glycosyl transferase family 2 106 214 4.6E-11 T 25-04-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CLFO_RS09170 9138157b2ca03e22393c60f4a2732498 330 SUPERFAMILY SSF53448 104 306 4.03E-26 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS09170 9138157b2ca03e22393c60f4a2732498 330 Gene3D G3DSA:3.90.550.10 106 316 1.5E-18 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS20265 c5c5db33c228c93b5685371e125a2d22 444 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 53 430 5.5E-14 T 25-04-2017 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CLFO_RS20265 c5c5db33c228c93b5685371e125a2d22 444 SUPERFAMILY SSF56059 10 186 1.59E-45 T 25-04-2017 CLFO_RS20265 c5c5db33c228c93b5685371e125a2d22 444 SUPERFAMILY SSF56059 286 430 1.59E-45 T 25-04-2017 CLFO_RS11105 b1a7ba226abcbcca7456c9f4d4702e15 149 Pfam PF03963 Flagellar hook capping protein - N-terminal region 18 77 1.2E-25 T 25-04-2017 IPR005648 Flagellar hook capping protein CLFO_RS07325 cc179db4f79793a2b69bd69c0fe88b26 166 Gene3D G3DSA:3.40.1350.10 5 165 8.6E-36 T 25-04-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 CLFO_RS07325 cc179db4f79793a2b69bd69c0fe88b26 166 SUPERFAMILY SSF52980 6 165 2.33E-34 T 25-04-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CLFO_RS07325 cc179db4f79793a2b69bd69c0fe88b26 166 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 166 31.846 T 25-04-2017 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 CLFO_RS07325 cc179db4f79793a2b69bd69c0fe88b26 166 Pfam PF03838 Recombination protein U 4 164 1.8E-35 T 25-04-2017 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 CLFO_RS00675 065964cc334750a6a33c6f41cb6db906 837 Pfam PF00932 Lamin Tail Domain 30 141 8.6E-16 T 25-04-2017 IPR001322 Lamin Tail Domain CLFO_RS00675 065964cc334750a6a33c6f41cb6db906 837 Gene3D G3DSA:2.60.40.1260 34 106 6.7E-8 T 25-04-2017 IPR001322 Lamin Tail Domain CLFO_RS00675 065964cc334750a6a33c6f41cb6db906 837 SUPERFAMILY SSF74853 30 134 4.58E-14 T 25-04-2017 IPR001322 Lamin Tail Domain CLFO_RS00675 065964cc334750a6a33c6f41cb6db906 837 Pfam PF08757 CotH protein 398 737 4.3E-65 T 25-04-2017 IPR014867 Spore coat protein CotH CLFO_RS00675 065964cc334750a6a33c6f41cb6db906 837 Pfam PF13287 Fn3 associated 202 310 1.6E-12 T 25-04-2017 IPR026876 Fn3 associated repeat CLFO_RS17050 16856537f79814dd9670891527e834f2 76 Pfam PF13129 Protein of unknown function (DUF3953) 32 72 4.3E-13 T 25-04-2017 IPR025018 Protein of unknown function DUF3953 CLFO_RS07965 892f188446b9098015392dc2dbc4afa1 151 Pfam PF03862 SpoVA protein 28 145 7.9E-41 T 25-04-2017 IPR005562 SpoVA CLFO_RS07965 892f188446b9098015392dc2dbc4afa1 151 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 10 150 3.7E-59 T 25-04-2017 IPR014203 Sporulation stage V, protein AC CLFO_RS06385 19cff997bc0e60ca0154b0aa2a0d9b1a 654 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 136 571 9.7E-101 T 25-04-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLFO_RS06385 19cff997bc0e60ca0154b0aa2a0d9b1a 654 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 40 643 1.1E-231 T 25-04-2017 IPR011853 TRAP transporter, 4TM/12TM fusion protein CLFO_RS06385 19cff997bc0e60ca0154b0aa2a0d9b1a 654 Pfam PF11874 Domain of unknown function (DUF3394) 577 625 1.1E-8 T 25-04-2017 IPR021814 Protein of unknown function DUF3394 CLFO_RS05165 c85a06d258c511e12e434d44e14bd5fe 235 Pfam PF13367 Protease prsW family 29 206 2.6E-42 T 25-04-2017 IPR026898 Protease PrsW GO:0008233 CLFO_RS05165 c85a06d258c511e12e434d44e14bd5fe 235 PIRSF PIRSF016933 2 230 4.5E-71 T 25-04-2017 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 CLFO_RS05770 45d30645b716ac51723392404bfa8a0e 156 Pfam PF04463 Protein of unknown function (DUF523) 2 142 2.7E-47 T 25-04-2017 IPR007553 Domain of unknown function DUF523 CLFO_RS12580 8c0da86ae14e763e4d8548f9716fa1ac 411 Pfam PF02687 FtsX-like permease family 281 403 5.9E-13 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS09995 8df50d8cbd5e659551f538ea9a217be4 315 Pfam PF01032 FecCD transport family 10 311 5.0E-64 T 25-04-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CLFO_RS09995 8df50d8cbd5e659551f538ea9a217be4 315 SUPERFAMILY SSF81345 5 311 5.75E-64 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS09995 8df50d8cbd5e659551f538ea9a217be4 315 Gene3D G3DSA:1.10.3470.10 6 313 2.1E-67 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS13195 15b2c390980b0e39276636018c8ff4dd 241 Pfam PF03591 AzlC protein 26 165 2.2E-38 T 25-04-2017 IPR011606 Branched-chain amino acid transport, permease CLFO_RS20860 2ebadcb58458cda38114244ba48353ad 482 Pfam PF00474 Sodium:solute symporter family 37 406 1.1E-33 T 25-04-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLFO_RS16855 ac761df902e9767a051e5818e371adc9 244 Gene3D G3DSA:2.130.10.130 19 112 3.2E-7 T 25-04-2017 CLFO_RS16855 ac761df902e9767a051e5818e371adc9 244 Gene3D G3DSA:2.130.10.130 161 200 3.2E-7 T 25-04-2017 CLFO_RS16855 ac761df902e9767a051e5818e371adc9 244 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 23 90 3.3E-6 T 25-04-2017 CLFO_RS16855 ac761df902e9767a051e5818e371adc9 244 SUPERFAMILY SSF69318 15 203 1.14E-12 T 25-04-2017 CLFO_RS08795 e8c03e5a6ce4dbd7bec13d5c747627a3 95 Pfam PF05135 Phage gp6-like head-tail connector protein 3 88 1.9E-12 T 25-04-2017 IPR021146 Phage gp6-like head-tail connector protein CLFO_RS08795 e8c03e5a6ce4dbd7bec13d5c747627a3 95 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 4 91 3.4E-14 T 25-04-2017 IPR006450 Phage protein of unkonwn function CLFO_RS15995 90e313d4e10e96fe9feca81529c2f524 399 Pfam PF01554 MatE 241 355 1.0E-9 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS15995 90e313d4e10e96fe9feca81529c2f524 399 Pfam PF01554 MatE 17 178 4.1E-22 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS15995 90e313d4e10e96fe9feca81529c2f524 399 PIRSF PIRSF006603 1 397 1.6E-56 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS13020 d6f4067ccf9c2f302c050e4d98f7ae9d 76 Pfam PF00395 S-layer homology domain 17 58 4.1E-7 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS09360 962762ff4226aecc5200bc9c53f92491 246 Pfam PF01139 tRNA-splicing ligase RtcB 5 242 4.5E-45 T 25-04-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CLFO_RS09360 962762ff4226aecc5200bc9c53f92491 246 SUPERFAMILY SSF103365 6 243 6.15E-61 T 25-04-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CLFO_RS11630 3160f8f0a514d1f161ad7641a9661448 88 Pfam PF11385 Protein of unknown function (DUF3189) 2 86 1.6E-5 T 25-04-2017 IPR021525 Protein of unknown function DUF3189 CLFO_RS06285 58ecf5c63b3437ee1b24e4380a720102 250 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 21 245 5.4E-58 T 25-04-2017 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC CLFO_RS07980 58bd2e25407b58845d761e4c7a2c3b74 191 Pfam PF14097 Stage V sporulation protein AE1 6 184 1.5E-73 T 25-04-2017 IPR025914 Stage V sporulation protein AE CLFO_RS17770 7e56a6ffef6dda773f45b9731ffafe9d 391 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 31 379 1.1E-130 T 25-04-2017 CLFO_RS17770 7e56a6ffef6dda773f45b9731ffafe9d 391 Gene3D G3DSA:3.20.20.60 291 323 1.5E-19 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS17770 7e56a6ffef6dda773f45b9731ffafe9d 391 Gene3D G3DSA:3.20.20.60 36 257 1.5E-19 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS17770 7e56a6ffef6dda773f45b9731ffafe9d 391 SUPERFAMILY SSF51621 34 256 8.95E-17 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS17770 7e56a6ffef6dda773f45b9731ffafe9d 391 SUPERFAMILY SSF51621 290 323 8.95E-17 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS18900 e60f52314fa64d4ce99911578d50e641 409 Pfam PF07949 YbbR-like protein 41 123 3.7E-7 T 25-04-2017 IPR012505 YbbR-like CLFO_RS18900 e60f52314fa64d4ce99911578d50e641 409 Pfam PF07949 YbbR-like protein 225 303 1.3E-10 T 25-04-2017 IPR012505 YbbR-like CLFO_RS18900 e60f52314fa64d4ce99911578d50e641 409 Pfam PF07949 YbbR-like protein 133 215 1.3E-6 T 25-04-2017 IPR012505 YbbR-like CLFO_RS14345 124b1d1010bb9133d7ca6423bfe0fa6c 428 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 2 426 1.8E-215 T 25-04-2017 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 CLFO_RS14345 124b1d1010bb9133d7ca6423bfe0fa6c 428 PIRSF PIRSF011588 1 428 4.2E-220 T 25-04-2017 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 CLFO_RS10250 e0fb0cacfdb47162084bbf49efeb7af3 432 Pfam PF01964 Radical SAM ThiC family 2 422 1.0E-179 T 25-04-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CLFO_RS10250 e0fb0cacfdb47162084bbf49efeb7af3 432 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 1 428 50.926 T 25-04-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CLFO_RS10250 e0fb0cacfdb47162084bbf49efeb7af3 432 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 1 423 2.0E-170 T 25-04-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CLFO_RS15175 2bb87bb2e95f52ed7db836ca0dfe816f 365 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 3 364 2.6E-75 T 25-04-2017 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLFO_RS15175 2bb87bb2e95f52ed7db836ca0dfe816f 365 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 203 361 1.3E-26 T 25-04-2017 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLFO_RS09695 91bc6fcb6efac2ce44dada27fa28dc30 128 Pfam PF03780 Asp23 family, cell envelope-related function 9 113 1.9E-37 T 25-04-2017 IPR005531 Alkaline shock protein Asp23 CLFO_RS00160 3e19aa146aada3a1a507a2484f7f203b 88 Pfam PF11823 Protein of unknown function (DUF3343) 7 74 2.1E-24 T 25-04-2017 IPR021778 Protein of unknown function DUF3343 CLFO_RS00515 14d8e3efd0df49d4955f7b79ac546fa4 330 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 82 243 8.0E-33 T 25-04-2017 IPR004474 Cell envelope-related transcriptional attenuator domain CLFO_RS00515 14d8e3efd0df49d4955f7b79ac546fa4 330 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 82 244 1.6E-36 T 25-04-2017 IPR004474 Cell envelope-related transcriptional attenuator domain CLFO_RS20745 f64c052921f24c480b1066445d7b6766 252 Gene3D G3DSA:3.40.50.150 8 195 6.7E-36 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS20745 f64c052921f24c480b1066445d7b6766 252 SUPERFAMILY SSF53335 5 223 3.8E-38 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS20745 f64c052921f24c480b1066445d7b6766 252 Pfam PF08241 Methyltransferase domain 54 148 1.0E-20 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS09125 ce89575a1dad436ec117f1fd01c1b0b4 118 Pfam PF11823 Protein of unknown function (DUF3343) 32 101 3.9E-15 T 25-04-2017 IPR021778 Protein of unknown function DUF3343 CLFO_RS02735 a0c2c1b7fa1471ac3a400e3b0da89694 657 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 161 175 2.8E-5 T 25-04-2017 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD CLFO_RS02735 a0c2c1b7fa1471ac3a400e3b0da89694 657 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 98 112 2.8E-5 T 25-04-2017 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD CLFO_RS02735 a0c2c1b7fa1471ac3a400e3b0da89694 657 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 245 259 2.8E-5 T 25-04-2017 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD CLFO_RS02735 a0c2c1b7fa1471ac3a400e3b0da89694 657 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 178 190 2.8E-5 T 25-04-2017 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD CLFO_RS01710 9298c3f7f8f22390e7f4b35f56990846 159 SUPERFAMILY SSF101116 6 120 1.03E-21 T 25-04-2017 IPR003713 Flagellar protein FliS GO:0044780 CLFO_RS01710 9298c3f7f8f22390e7f4b35f56990846 159 Pfam PF02561 Flagellar protein FliS 6 116 4.1E-22 T 25-04-2017 IPR003713 Flagellar protein FliS GO:0044780 CLFO_RS01710 9298c3f7f8f22390e7f4b35f56990846 159 Gene3D G3DSA:1.20.120.340 6 121 2.5E-24 T 25-04-2017 IPR003713 Flagellar protein FliS GO:0044780 CLFO_RS10490 3d42ef4dcd2fe0d75c11edc9836cf4d5 164 SUPERFAMILY SSF88659 91 142 2.62E-5 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS20705 1709c4a6e5776f537c3130ddc20a596a 307 SUPERFAMILY SSF160904 249 297 8.63E-5 T 25-04-2017 CLFO_RS13890 c834df36d6736161f5507b73f377000f 490 Gene3D G3DSA:3.90.640.20 181 238 6.3E-6 T 25-04-2017 IPR021729 Domain of unknown function DUF3298 CLFO_RS13890 c834df36d6736161f5507b73f377000f 490 Gene3D G3DSA:3.90.640.20 405 482 3.2E-4 T 25-04-2017 IPR021729 Domain of unknown function DUF3298 CLFO_RS13890 c834df36d6736161f5507b73f377000f 490 Gene3D G3DSA:3.30.565.40 290 402 1.3E-8 T 25-04-2017 IPR025303 Domain of unknown function DUF4163 CLFO_RS13890 c834df36d6736161f5507b73f377000f 490 Gene3D G3DSA:3.30.565.40 63 178 2.1E-9 T 25-04-2017 IPR025303 Domain of unknown function DUF4163 CLFO_RS09810 36431b03cac8fc518a8eb4cfd53f6294 179 Pfam PF00293 NUDIX domain 43 157 6.7E-18 T 25-04-2017 IPR000086 NUDIX hydrolase domain GO:0016787 CLFO_RS09810 36431b03cac8fc518a8eb4cfd53f6294 179 SUPERFAMILY SSF55811 6 174 2.3E-49 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS09810 36431b03cac8fc518a8eb4cfd53f6294 179 Gene3D G3DSA:3.90.79.10 4 174 6.2E-60 T 25-04-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 CLFO_RS09810 36431b03cac8fc518a8eb4cfd53f6294 179 ProSitePatterns PS00893 Nudix box signature. 76 97 - T 25-04-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CLFO_RS09810 36431b03cac8fc518a8eb4cfd53f6294 179 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 6 169 3.9E-23 T 25-04-2017 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CLFO_RS13190 7d01da6bf3e7560bad701068af474094 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 101 1.3E-25 T 25-04-2017 IPR008407 Branched-chain amino acid transport, AzlD CLFO_RS06585 b3307eb0ccc9bc95c1d64765c894ef82 166 ProDom PD096809 MEMBRANE BIOX SA2210 PROBABLE PROTEIN BIOSYNTHESIS TRANSMEMBRANE BIOTIN MW2345 21 143 2.0E-14 T 25-04-2017 IPR020345 Biotin biosynthesis BioX CLFO_RS03870 05a3c21c4eb13294e7ed0763df2cb800 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 51 329 2.7E-98 T 25-04-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CLFO_RS03870 05a3c21c4eb13294e7ed0763df2cb800 350 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 51 303 1.8E-81 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS03870 05a3c21c4eb13294e7ed0763df2cb800 350 SUPERFAMILY SSF53850 155 259 9.87E-5 T 25-04-2017 CLFO_RS03870 05a3c21c4eb13294e7ed0763df2cb800 350 PIRSF PIRSF006470 10 346 5.7E-118 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS13515 a65033d03bcfad98a18fd83007858db3 57 Pfam PF11127 Protein of unknown function (DUF2892) 6 57 2.9E-9 T 25-04-2017 IPR021309 Protein of unknown function DUF2892 CLFO_RS20005 42f408f27264379a5ddc0ae7cabaab93 138 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 26 97 5.6E-15 T 25-04-2017 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CLFO_RS20005 42f408f27264379a5ddc0ae7cabaab93 138 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 25 99 2.4E-10 T 25-04-2017 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CLFO_RS10685 d189164d919c34f01c2a9474ca0fb498 280 Pfam PF02401 LytB protein 3 277 1.2E-96 T 25-04-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 CLFO_RS10685 d189164d919c34f01c2a9474ca0fb498 280 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 280 2.5E-89 T 25-04-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 CLFO_RS10685 d189164d919c34f01c2a9474ca0fb498 280 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 280 32.386 T 25-04-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 CLFO_RS04925 1be4047cd38a1c0f9d88a5a65f41cda0 293 Gene3D G3DSA:3.40.190.10 137 239 1.0E-40 T 25-04-2017 CLFO_RS04925 1be4047cd38a1c0f9d88a5a65f41cda0 293 SUPERFAMILY SSF53850 48 279 8.61E-33 T 25-04-2017 CLFO_RS04925 1be4047cd38a1c0f9d88a5a65f41cda0 293 Gene3D G3DSA:3.40.190.10 55 136 1.6E-20 T 25-04-2017 CLFO_RS04925 1be4047cd38a1c0f9d88a5a65f41cda0 293 Gene3D G3DSA:3.40.190.10 240 279 1.6E-20 T 25-04-2017 CLFO_RS04925 1be4047cd38a1c0f9d88a5a65f41cda0 293 Pfam PF12849 PBP superfamily domain 44 270 2.3E-33 T 25-04-2017 IPR024370 PBP domain CLFO_RS08645 c6d979b8c6e31cd35655cef2f355d81c 332 Pfam PF00589 Phage integrase family 141 306 2.8E-36 T 25-04-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS08645 c6d979b8c6e31cd35655cef2f355d81c 332 Gene3D G3DSA:1.10.150.130 41 123 1.5E-4 T 25-04-2017 IPR023109 Integrase/recombinase, N-terminal CLFO_RS08645 c6d979b8c6e31cd35655cef2f355d81c 332 SUPERFAMILY SSF56349 30 314 2.3E-48 T 25-04-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CLFO_RS08645 c6d979b8c6e31cd35655cef2f355d81c 332 Gene3D G3DSA:1.10.443.10 140 313 1.3E-38 T 25-04-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CLFO_RS00610 4791a137263bfc66fd56cfbba4698e88 73 Pfam PF04977 Septum formation initiator 4 68 6.1E-8 T 25-04-2017 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 CLFO_RS09220 bc284b52ef60dece2136358b63ca6fe0 274 SUPERFAMILY SSF53448 53 269 1.69E-11 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS09220 bc284b52ef60dece2136358b63ca6fe0 274 Pfam PF13712 Glycosyltransferase like family 55 269 3.5E-80 T 25-04-2017 CLFO_RS09220 bc284b52ef60dece2136358b63ca6fe0 274 Gene3D G3DSA:3.90.550.10 86 234 1.9E-5 T 25-04-2017 IPR029044 Nucleotide-diphospho-sugar transferases CLFO_RS14140 b335342ce07545d8280d8f08d4b8f858 86 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 53 2.5E-15 T 25-04-2017 IPR007419 BFD-like [2Fe-2S]-binding domain CLFO_RS19985 63a94a36424d31021dada89506a70c24 179 Pfam PF12822 Protein of unknown function (DUF3816) 18 169 7.0E-21 T 25-04-2017 IPR024529 ECF transporter, substrate-specific component GO:0005215 CLFO_RS21375 7bdf5d834eb3cd2b7df9e0fd744d7a55 182 Pfam PF14584 Protein of unknown function (DUF4446) 16 162 6.7E-51 T 25-04-2017 IPR027981 Protein of unknown function DUF4446 CLFO_RS15705 2ea938e0c8473b4813d47a4a3bddb4a9 370 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 206 360 5.1E-15 T 25-04-2017 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLFO_RS15705 2ea938e0c8473b4813d47a4a3bddb4a9 370 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 4 362 1.4E-63 T 25-04-2017 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLFO_RS09860 3badf93f9feda0ff4fed0d39e857c229 247 Hamap MF_01805 Segregation and condensation protein A [scpA]. 3 246 24.243 T 25-04-2017 IPR003768 Segregation and condensation protein A CLFO_RS09860 3badf93f9feda0ff4fed0d39e857c229 247 Pfam PF02616 Segregation and condensation protein ScpA 20 243 1.3E-36 T 25-04-2017 IPR003768 Segregation and condensation protein A CLFO_RS09525 99570eea4534b09ce3c5467958942802 561 Pfam PF00905 Penicillin binding protein transpeptidase domain 246 552 4.3E-68 T 25-04-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CLFO_RS09525 99570eea4534b09ce3c5467958942802 561 SUPERFAMILY SSF56519 55 210 1.01E-17 T 25-04-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CLFO_RS09525 99570eea4534b09ce3c5467958942802 561 Gene3D G3DSA:3.90.1310.10 154 231 3.6E-11 T 25-04-2017 CLFO_RS09525 99570eea4534b09ce3c5467958942802 561 SUPERFAMILY SSF56601 227 555 1.44E-86 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS09525 99570eea4534b09ce3c5467958942802 561 Gene3D G3DSA:3.40.710.10 232 555 2.1E-94 T 25-04-2017 IPR012338 Beta-lactamase/transpeptidase-like CLFO_RS01735 b27683f609a512e8482ad08b3fa47e42 307 SUPERFAMILY SSF53822 24 303 3.53E-70 T 25-04-2017 IPR028082 Periplasmic binding protein-like I CLFO_RS01735 b27683f609a512e8482ad08b3fa47e42 307 Gene3D G3DSA:3.40.50.2300 28 147 7.8E-42 T 25-04-2017 CLFO_RS01735 b27683f609a512e8482ad08b3fa47e42 307 Gene3D G3DSA:3.40.50.2300 148 295 1.6E-44 T 25-04-2017 CLFO_RS01735 b27683f609a512e8482ad08b3fa47e42 307 Pfam PF13407 Periplasmic binding protein domain 33 281 3.6E-58 T 25-04-2017 IPR025997 Periplasmic binding protein CLFO_RS00190 f21a1346d123aaeaa99988eaa8dd4975 360 Pfam PF07907 YibE/F-like protein 120 357 5.5E-78 T 25-04-2017 IPR012507 YibE/F-like CLFO_RS14675 cafb1bef69a0496d03e78c42cd8c79ea 134 Pfam PF09862 Protein of unknown function (DUF2089) 9 130 3.2E-44 T 25-04-2017 IPR018658 Protein of unknown function DUF2089 CLFO_RS03230 4bbda1156dd8f09c0d8cd62d52cbb811 86 Pfam PF02583 Metal-sensitive transcriptional repressor 7 81 6.4E-25 T 25-04-2017 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CLFO_RS11110 76cc735a45b3da5bdfd923cefbe35181 420 Pfam PF02120 Flagellar hook-length control protein FliK 294 369 6.0E-16 T 25-04-2017 IPR021136 Flagellar hook-length control protein-like, C-terminal CLFO_RS21005 26cd4644022dd2907b1948dd96a0ec18 267 Pfam PF13485 Peptidase MA superfamily 158 259 9.7E-9 T 25-04-2017 CLFO_RS11085 7a0092a93f3391b3bb5dc78d54ac2367 261 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 184 201 - T 25-04-2017 IPR000540 Flagellar motor protein MotA, conserved site CLFO_RS11085 7a0092a93f3391b3bb5dc78d54ac2367 261 Pfam PF01618 MotA/TolQ/ExbB proton channel family 100 217 8.2E-28 T 25-04-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CLFO_RS01925 378d9063ac736dcdbe267352692f4441 238 Pfam PF04474 Protein of unknown function (DUF554) 2 220 6.6E-78 T 25-04-2017 IPR007563 Protein of unknown function DUF554 CLFO_RS02475 e7a7dd079d7f25d926e5cd57035a71c5 356 PIRSF PIRSF005622 1 356 7.5E-132 T 25-04-2017 IPR002780 Hydrogenase formation HypD protein GO:0046872 CLFO_RS02475 e7a7dd079d7f25d926e5cd57035a71c5 356 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 6 354 8.3E-124 T 25-04-2017 IPR002780 Hydrogenase formation HypD protein GO:0046872 CLFO_RS02475 e7a7dd079d7f25d926e5cd57035a71c5 356 Pfam PF01924 Hydrogenase formation hypA family 7 353 2.8E-135 T 25-04-2017 IPR002780 Hydrogenase formation HypD protein GO:0046872 CLFO_RS09670 7fde0f0ad69a3f41c652a340223397ba 128 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 28 127 1.0E-36 T 25-04-2017 IPR014211 Stage III sporulation protein AD CLFO_RS09670 7fde0f0ad69a3f41c652a340223397ba 128 Pfam PF06686 Stage III sporulation protein AC/AD protein family 3 57 3.9E-15 T 25-04-2017 IPR025664 Stage III sporulation protein AC/AD family CLFO_RS09670 7fde0f0ad69a3f41c652a340223397ba 128 Pfam PF06686 Stage III sporulation protein AC/AD protein family 71 124 3.9E-20 T 25-04-2017 IPR025664 Stage III sporulation protein AC/AD family CLFO_RS00825 78250ce5f1875b805b8f107e144ea932 222 Pfam PF16316 Domain of unknown function (DUF4956) 32 144 1.8E-14 T 25-04-2017 IPR032531 Protein of unknown function DUF4956 CLFO_RS08135 1d8b8e1774aad702bf2f375a50310de8 128 Pfam PF10710 Protein of unknown function (DUF2512) 10 122 9.6E-9 T 25-04-2017 IPR019649 Protein of unknown function DUF2512 CLFO_RS11115 cd200a807b23ccaf4a1aece4f0481897 414 SUPERFAMILY SSF158791 294 404 6.15E-6 T 25-04-2017 CLFO_RS10400 ac04abcd28859a88e0d9081465d7a58b 150 Pfam PF08890 Phage XkdN-like tail assembly chaperone protein, TAC 28 146 2.1E-31 T 25-04-2017 IPR014986 Clostridium phage phiCD119, XkdN CLFO_RS11015 555d20b0f69743d9fab6701a03d464de 216 Gene3D G3DSA:2.40.10.220 103 213 1.1E-12 T 25-04-2017 CLFO_RS11015 555d20b0f69743d9fab6701a03d464de 216 Pfam PF07238 PilZ domain 102 204 4.8E-15 T 25-04-2017 IPR009875 PilZ domain GO:0035438 CLFO_RS11015 555d20b0f69743d9fab6701a03d464de 216 Pfam PF12945 Flagellar protein YcgR 8 92 4.7E-17 T 25-04-2017 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CLFO_RS04705 7081a3d4adfc5896b6e0010d7f9aa5e9 207 Gene3D G3DSA:3.60.21.10 33 170 5.2E-8 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS04705 7081a3d4adfc5896b6e0010d7f9aa5e9 207 Pfam PF00149 Calcineurin-like phosphoesterase 33 183 3.3E-8 T 25-04-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CLFO_RS04705 7081a3d4adfc5896b6e0010d7f9aa5e9 207 SUPERFAMILY SSF56300 33 164 1.12E-12 T 25-04-2017 IPR029052 Metallo-dependent phosphatase-like CLFO_RS09800 2fc66326afd8a17f33e1beafb5e496ca 271 Pfam PF00953 Glycosyl transferase family 4 72 227 9.1E-9 T 25-04-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CLFO_RS14955 b5d99346c9026a81a28a031e474c74bc 301 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 277 1.4E-28 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS04335 de95a2715c50f436edc7322f60832294 95 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 1.3E-15 T 25-04-2017 IPR012452 Protein of unknown function DUF1657 CLFO_RS01090 25d6ac79d1e8bd63dd65651621c514e8 103 Pfam PF10135 Rod binding protein 45 93 7.1E-16 T 25-04-2017 IPR019301 Flagellar protein FlgJ, N-terminal CLFO_RS01090 25d6ac79d1e8bd63dd65651621c514e8 103 PRINTS PR01002 Flagellar protein FlgJ signature 23 46 6.3E-5 T 25-04-2017 CLFO_RS01090 25d6ac79d1e8bd63dd65651621c514e8 103 PRINTS PR01002 Flagellar protein FlgJ signature 70 92 6.3E-5 T 25-04-2017 CLFO_RS21215 e0fbb73f3b77cad750faa7e071169b33 228 Gene3D G3DSA:3.40.470.10 107 194 1.5E-4 T 25-04-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CLFO_RS21255 44df5f1e3074c3ddd745ed7bcffe4a76 851 TIGRFAM TIGR02687 TIGR02687: TIGR02687 family protein 24 839 1.2E-220 T 25-04-2017 IPR014060 Conserved hypothetical protein CHP02687 CLFO_RS21255 44df5f1e3074c3ddd745ed7bcffe4a76 851 SUPERFAMILY SSF53649 457 640 9.16E-5 T 25-04-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CLFO_RS21255 44df5f1e3074c3ddd745ed7bcffe4a76 851 Pfam PF08665 PglZ domain 462 637 1.2E-60 T 25-04-2017 IPR013973 PglZ domain CLFO_RS17575 0868183b8b61b629a57b64b9cc7dbe6c 54 Pfam PF07561 Domain of Unknown Function (DUF1540) 9 51 1.6E-8 T 25-04-2017 IPR011437 Domain of unknown function DUF1540 CLFO_RS14405 92fc2c8d036f18095d1668e0cc5c89f5 80 Gene3D G3DSA:1.20.1260.10 4 63 5.4E-5 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS17265 c5543d99335c30ff1dab019e13f99f1a 338 Pfam PF09565 NgoFVII restriction endonuclease 11 295 2.9E-69 T 25-04-2017 IPR019065 Restriction endonuclease, type II, NgoFVII CLFO_RS13555 bf9f092e3a792f54ceff3d710917b22a 272 Gene3D G3DSA:3.90.1670.10 10 270 1.0E-39 T 25-04-2017 IPR024064 FdhE-like CLFO_RS13555 bf9f092e3a792f54ceff3d710917b22a 272 SUPERFAMILY SSF144020 45 264 7.72E-36 T 25-04-2017 IPR024064 FdhE-like CLFO_RS13555 bf9f092e3a792f54ceff3d710917b22a 272 Pfam PF04216 Protein involved in formate dehydrogenase formation 14 271 3.7E-23 T 25-04-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CLFO_RS00645 65d2154a2df85135b36e9ac9476fac9c 493 Pfam PF00395 S-layer homology domain 290 329 3.6E-5 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS00645 65d2154a2df85135b36e9ac9476fac9c 493 Pfam PF00395 S-layer homology domain 361 402 7.1E-9 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS00645 65d2154a2df85135b36e9ac9476fac9c 493 Pfam PF00395 S-layer homology domain 427 466 1.3E-7 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS15855 c99346c0a008bbc6ae74fcafe326c2e0 250 Pfam PF08241 Methyltransferase domain 51 146 1.3E-21 T 25-04-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CLFO_RS15855 c99346c0a008bbc6ae74fcafe326c2e0 250 SUPERFAMILY SSF53335 7 222 1.96E-37 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS15855 c99346c0a008bbc6ae74fcafe326c2e0 250 Gene3D G3DSA:3.40.50.150 7 170 9.2E-35 T 25-04-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLFO_RS08895 9b89be919dd26b366278e2f60328ed35 66 Pfam PF04070 Domain of unknown function (DUF378) 1 58 8.7E-28 T 25-04-2017 IPR007211 Protein of unknown function DUF378 CLFO_RS05690 fddc0c24a6913e5ce3da9f36ef112ddd 177 Pfam PF04060 Putative Fe-S cluster 121 153 2.3E-10 T 25-04-2017 IPR007202 4Fe-4S domain GO:0051536 CLFO_RS02985 e37afd51e3d87bacf13947c3d3d4cf22 159 Pfam PF13686 DsrE/DsrF/DrsH-like family 3 158 4.4E-56 T 25-04-2017 IPR032836 DsrE/DsrF/DrsH-like family CLFO_RS02985 e37afd51e3d87bacf13947c3d3d4cf22 159 Gene3D G3DSA:3.40.1260.10 2 159 8.9E-45 T 25-04-2017 IPR027396 DsrEFH-like CLFO_RS02985 e37afd51e3d87bacf13947c3d3d4cf22 159 SUPERFAMILY SSF75169 4 50 2.49E-18 T 25-04-2017 IPR027396 DsrEFH-like CLFO_RS02985 e37afd51e3d87bacf13947c3d3d4cf22 159 SUPERFAMILY SSF75169 101 147 2.49E-18 T 25-04-2017 IPR027396 DsrEFH-like CLFO_RS11280 ad313d2eb703d3a50b70b89d8f498169 317 TIGRFAM TIGR03151 enACPred_II: putative enoyl-[acyl-carrier-protein] reductase II 3 308 4.6E-154 T 25-04-2017 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative CLFO_RS11280 ad313d2eb703d3a50b70b89d8f498169 317 Gene3D G3DSA:3.20.20.70 2 295 1.3E-77 T 25-04-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 CLFO_RS11280 ad313d2eb703d3a50b70b89d8f498169 317 Pfam PF03060 Nitronate monooxygenase 82 300 8.7E-55 T 25-04-2017 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CLFO_RS11280 ad313d2eb703d3a50b70b89d8f498169 317 Pfam PF03060 Nitronate monooxygenase 4 81 6.2E-25 T 25-04-2017 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CLFO_RS11280 ad313d2eb703d3a50b70b89d8f498169 317 SUPERFAMILY SSF51412 2 309 4.88E-79 T 25-04-2017 CLFO_RS03035 f40cce3666bc002356e989e1218916d6 182 Pfam PF02417 Chromate transporter 5 169 1.6E-49 T 25-04-2017 IPR003370 Chromate transporter GO:0015109|GO:0015703 CLFO_RS04220 497d4e819376ad40da485c8f3123b1f5 60 Gene3D G3DSA:1.20.1260.10 4 60 4.6E-5 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS08595 91101f255e31d71a47019fedb7b9fc44 126 Pfam PF01042 Endoribonuclease L-PSP 7 125 2.2E-50 T 25-04-2017 IPR006175 YjgF/YER057c/UK114 family CLFO_RS08595 91101f255e31d71a47019fedb7b9fc44 126 SUPERFAMILY SSF55298 3 125 1.48E-51 T 25-04-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLFO_RS08595 91101f255e31d71a47019fedb7b9fc44 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 1.3E-59 T 25-04-2017 IPR006056 RidA family CLFO_RS08595 91101f255e31d71a47019fedb7b9fc44 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 25-04-2017 IPR019897 RidA, conserved site CLFO_RS08595 91101f255e31d71a47019fedb7b9fc44 126 Gene3D G3DSA:3.30.1330.40 2 125 7.2E-57 T 25-04-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLFO_RS08785 1d3fc7ddd21b3ad6b19e11ab9379fd5c 196 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 26 172 2.0E-21 T 25-04-2017 IPR006433 Prohead protease CLFO_RS08785 1d3fc7ddd21b3ad6b19e11ab9379fd5c 196 Pfam PF04586 Caudovirus prohead serine protease 13 177 1.2E-39 T 25-04-2017 IPR006433 Prohead protease CLFO_RS05740 8a45fe6f3bc33cda4ad91dfcc90ac4b6 250 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 3 46 3.2E-10 T 25-04-2017 IPR013422 CRISPR-associated protein Cas5, N-terminal CLFO_RS05740 8a45fe6f3bc33cda4ad91dfcc90ac4b6 250 TIGRFAM TIGR02592 cas_Cas5h: CRISPR-associated protein Cas5, subtype I-B/HMARI 2 250 2.4E-72 T 25-04-2017 IPR013421 CRISPR-associated protein Cas5, HALMA CLFO_RS21140 95bf08d5043b22a4ba96f32020ec3ea4 56 SUPERFAMILY SSF140500 8 51 8.63E-9 T 25-04-2017 CLFO_RS21140 95bf08d5043b22a4ba96f32020ec3ea4 56 Pfam PF09388 Spo0E like sporulation regulatory protein 8 47 1.7E-13 T 25-04-2017 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 CLFO_RS04630 c7e4442cd8e3139a4187be229d511ee3 141 Pfam PF07670 Nucleoside recognition 20 99 1.1E-6 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS05890 fc7bcefaf62b0c7e546639f6ac9ccaa3 152 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 16 136 4.6E-22 T 25-04-2017 IPR010181 CGCAxxGCC motif CLFO_RS16965 8ace8a90486cd44dc073404593bfd3d3 241 SUPERFAMILY SSF53474 12 226 1.97E-23 T 25-04-2017 IPR029058 Alpha/Beta hydrolase fold CLFO_RS16965 8ace8a90486cd44dc073404593bfd3d3 241 Gene3D G3DSA:3.40.50.1820 11 231 1.9E-25 T 25-04-2017 IPR029058 Alpha/Beta hydrolase fold CLFO_RS20735 af114798c65c9964a5ea496881585dec 78 SUPERFAMILY SSF55008 37 77 1.57E-6 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS20735 af114798c65c9964a5ea496881585dec 78 Pfam PF00403 Heavy-metal-associated domain 36 77 1.2E-5 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS20735 af114798c65c9964a5ea496881585dec 78 Gene3D G3DSA:3.30.70.100 35 76 1.6E-6 T 25-04-2017 CLFO_RS13915 47d6131b7a430293f0cd4ca102b6baac 451 Pfam PF07670 Nucleoside recognition 138 235 4.1E-7 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS03825 c074ce111b26a03ad52c27d023dc8a9f 431 Pfam PF09861 Domain of unknown function (DUF2088) 30 200 1.4E-7 T 25-04-2017 IPR018657 Domain of unknown function DUF2088 CLFO_RS15070 376159e25669dc32afa5fd0128f13361 425 Gene3D G3DSA:2.40.50.100 233 266 1.8E-8 T 25-04-2017 CLFO_RS15070 376159e25669dc32afa5fd0128f13361 425 Gene3D G3DSA:2.40.50.100 70 103 1.8E-8 T 25-04-2017 CLFO_RS16875 f916aee8363b342270a647b960cbdb6f 328 SUPERFAMILY SSF81345 7 325 4.97E-72 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS16875 f916aee8363b342270a647b960cbdb6f 328 Pfam PF01032 FecCD transport family 16 325 4.7E-89 T 25-04-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CLFO_RS16875 f916aee8363b342270a647b960cbdb6f 328 Gene3D G3DSA:1.10.3470.10 3 327 1.2E-88 T 25-04-2017 IPR029022 ABC transporter, BtuC-like CLFO_RS13840 bc5efe890a25782295cbdaa1083c912e 171 Pfam PF04143 Sulphur transport 3 162 2.9E-39 T 25-04-2017 IPR007272 Sulphur transport domain CLFO_RS01970 199b4d9905a48a65fef81afffb2e4f87 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 6 85 1.1E-25 T 25-04-2017 IPR009614 Toxin YoeB GO:0004519|GO:0006401 CLFO_RS01970 199b4d9905a48a65fef81afffb2e4f87 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 20 85 3.2E-11 T 25-04-2017 IPR009614 Toxin YoeB GO:0004519|GO:0006401 CLFO_RS01970 199b4d9905a48a65fef81afffb2e4f87 87 SUPERFAMILY SSF143011 1 86 9.68E-20 T 25-04-2017 CLFO_RS02775 9898a7ce881fe499351306d29fe4fe96 253 Gene3D G3DSA:3.20.20.370 16 244 1.0E-79 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS02775 9898a7ce881fe499351306d29fe4fe96 253 SUPERFAMILY SSF88713 39 243 1.52E-72 T 25-04-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CLFO_RS02775 9898a7ce881fe499351306d29fe4fe96 253 Pfam PF01522 Polysaccharide deacetylase 49 170 3.5E-40 T 25-04-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 CLFO_RS09040 b8ab57a9867c2e9dc944e73fb4242014 244 Pfam PF06738 Putative threonine/serine exporter 1 235 7.8E-72 T 25-04-2017 IPR010619 Putative threonine/serine exporter CLFO_RS17960 b87d7e9e716522b9e236c1e6568acbbd 88 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 32 83 8.0E-18 T 25-04-2017 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 CLFO_RS11090 6913e7bc533f4751bd702e1d216a5168 64 Pfam PF06289 Flagellar protein (FlbD) 1 59 3.8E-29 T 25-04-2017 IPR009384 Flagellar CLFO_RS12815 8e95d1e84d1fd4da05fa484f595daa96 471 Pfam PF00474 Sodium:solute symporter family 33 418 3.3E-27 T 25-04-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLFO_RS15020 c75b0b6aaef2dfc674a39f9a0753b15a 748 Pfam PF02687 FtsX-like permease family 256 372 6.0E-11 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS15020 c75b0b6aaef2dfc674a39f9a0753b15a 748 Pfam PF02687 FtsX-like permease family 620 734 1.2E-9 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS09150 9dfdfc59ec94824268cd6f826189bf53 347 Pfam PF13692 Glycosyl transferases group 1 177 303 1.9E-7 T 25-04-2017 CLFO_RS09150 9dfdfc59ec94824268cd6f826189bf53 347 SUPERFAMILY SSF53756 33 338 4.45E-20 T 25-04-2017 CLFO_RS16245 f427c6eeb4dfaaec169b81491d93a89c 141 Pfam PF13586 Transposase DDE domain 56 138 6.1E-16 T 25-04-2017 IPR025668 Transposase DDE domain CLFO_RS18715 6fb7ec98094823fb48323cfa1e4e2db9 116 Pfam PF05717 IS66 Orf2 like protein 9 104 8.2E-35 T 25-04-2017 IPR008878 Transposase IS66, Orf2 CLFO_RS06950 2524f46196cb8ff0b65df82a3bbc73cd 320 Pfam PF03547 Membrane transport protein 9 150 4.2E-7 T 25-04-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CLFO_RS06950 2524f46196cb8ff0b65df82a3bbc73cd 320 Pfam PF03547 Membrane transport protein 168 308 3.2E-16 T 25-04-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CLFO_RS01655 85ca71da4b07c6341f4ce0f239b6949c 554 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 8 117 2.7E-26 T 25-04-2017 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CLFO_RS01655 85ca71da4b07c6341f4ce0f239b6949c 554 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 255 541 2.0E-49 T 25-04-2017 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CLFO_RS17340 be356bd6540103e87428861e802d6a09 119 Pfam PF14195 Domain of unknown function (DUF4316) 64 91 3.1E-14 T 25-04-2017 IPR025465 Domain of unknown function DUF4316 CLFO_RS03110 3795921c5e686500c719e93515f65499 206 Pfam PF04647 Accessory gene regulator B 10 181 6.5E-29 T 25-04-2017 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLFO_RS03110 3795921c5e686500c719e93515f65499 206 SMART SM00793 6 196 2.4E-27 T 25-04-2017 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 CLFO_RS20370 531e9b103dfe108816e16529da453511 122 Pfam PF03788 LrgA family 15 106 2.4E-31 T 25-04-2017 IPR005538 LrgA/CidA family GO:0016021 CLFO_RS00380 5f0b0429340ee6f586c614277be39841 109 Pfam PF06153 Cyclic-di-AMP receptor 1 108 1.0E-49 T 25-04-2017 IPR010375 Cyclic-di-AMP receptor CLFO_RS00380 5f0b0429340ee6f586c614277be39841 109 Gene3D G3DSA:3.30.70.120 1 108 1.2E-16 T 25-04-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLFO_RS00380 5f0b0429340ee6f586c614277be39841 109 SUPERFAMILY SSF54913 1 108 2.57E-12 T 25-04-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLFO_RS07790 58c256de49721091965113f7ead57604 266 Pfam PF06114 Domain of unknown function (DUF955) 71 176 3.5E-14 T 25-04-2017 IPR010359 HTH domain, IrrE-type CLFO_RS01530 eb089b00dd7c0b1b36a3493a7682557e 65 Pfam PF14070 Putative motility protein 3 63 7.1E-21 T 25-04-2017 IPR025906 Putative motility protein CLFO_RS19940 00fb10b3654fd1e1558594e293e7b55f 169 Pfam PF14595 Thioredoxin 12 135 1.7E-37 T 25-04-2017 CLFO_RS19940 00fb10b3654fd1e1558594e293e7b55f 169 SUPERFAMILY SSF52833 37 123 5.95E-11 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS19940 00fb10b3654fd1e1558594e293e7b55f 169 Gene3D G3DSA:3.40.30.10 2 166 1.3E-36 T 25-04-2017 IPR012336 Thioredoxin-like fold CLFO_RS15400 b35682c63bdc7fdf97f9431181511e46 276 Pfam PF05908 Poly-gamma-glutamate hydrolase 30 216 7.8E-44 T 25-04-2017 IPR008585 Poly-gamma-glutamate hydrolase CLFO_RS09725 93b58cfca03dca81a239d5c77924fa56 149 Pfam PF02681 Divergent PAP2 family 8 144 3.3E-51 T 25-04-2017 IPR003832 Acid phosphatase/vanadium-dependent haloperoxidase-related CLFO_RS13305 f8fdd5c5498d28f3c464e29b02a552b1 60 SUPERFAMILY SSF46689 12 53 4.3E-5 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS13305 f8fdd5c5498d28f3c464e29b02a552b1 60 Gene3D G3DSA:1.10.10.60 12 50 1.6E-4 T 25-04-2017 IPR009057 Homeodomain-like GO:0003677 CLFO_RS12685 9c8158ddd282d00fa2c2d442065e9af3 67 Pfam PF00403 Heavy-metal-associated domain 20 63 2.8E-6 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS12685 9c8158ddd282d00fa2c2d442065e9af3 67 SUPERFAMILY SSF55008 20 63 3.53E-7 T 25-04-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CLFO_RS12685 9c8158ddd282d00fa2c2d442065e9af3 67 Gene3D G3DSA:3.30.70.100 20 62 2.0E-6 T 25-04-2017 CLFO_RS05315 ec5aeeb0d890b5a46b6534cdb9cbaf8b 137 Gene3D G3DSA:1.10.10.10 2 82 1.7E-24 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS05315 ec5aeeb0d890b5a46b6534cdb9cbaf8b 137 Pfam PF01475 Ferric uptake regulator family 11 128 1.7E-29 T 25-04-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CLFO_RS05315 ec5aeeb0d890b5a46b6534cdb9cbaf8b 137 SUPERFAMILY SSF46785 4 132 7.71E-35 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS21090 a96978ca3fe372f2a1f341821350501f 69 Pfam PF08984 Domain of unknown function (DUF1858) 4 57 4.7E-20 T 25-04-2017 IPR015077 Domain of unknown function DUF1858 CLFO_RS21090 a96978ca3fe372f2a1f341821350501f 69 Gene3D G3DSA:1.10.3910.10 2 64 8.4E-5 T 25-04-2017 IPR015077 Domain of unknown function DUF1858 CLFO_RS21090 a96978ca3fe372f2a1f341821350501f 69 SUPERFAMILY SSF140683 1 65 6.15E-17 T 25-04-2017 CLFO_RS21090 a96978ca3fe372f2a1f341821350501f 69 TIGRFAM TIGR03980 prismane_assoc: hybrid cluster protein-associated redox disulfide domain 4 61 8.0E-27 T 25-04-2017 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide CLFO_RS17310 36db430f02ed3c9d2c5656f633b2b981 418 Pfam PF08401 Domain of unknown function (DUF1738) 8 134 3.8E-25 T 25-04-2017 IPR013610 Domain of unknown function DUF1738 CLFO_RS00255 6c2d9be418cc3ecf39a2fbc091c1c809 221 Pfam PF09335 SNARE associated Golgi protein 68 184 1.4E-23 T 25-04-2017 IPR032816 SNARE associated Golgi protein CLFO_RS20640 b83c9b90d1d7da764cccfe85612e0f2d 422 PIRSF PIRSF006066 1 422 1.9E-114 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS20640 b83c9b90d1d7da764cccfe85612e0f2d 422 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 420 1.2E-105 T 25-04-2017 IPR004681 TRAP transporter permease protein GO:0016021 CLFO_RS20640 b83c9b90d1d7da764cccfe85612e0f2d 422 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 4.0E-96 T 25-04-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLFO_RS05610 eb60746072a13dcb51d4d3d47d81863e 223 Pfam PF12225 Methylene-tetrahydrofolate reductase C terminal 109 202 8.0E-35 T 25-04-2017 IPR022026 Methylene-tetrahydrofolate reductase C-terminal CLFO_RS09935 7cc4c9781ece9bfa2806f74b8435ac0c 64 Gene3D G3DSA:3.40.50.300 23 64 4.1E-11 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS09935 7cc4c9781ece9bfa2806f74b8435ac0c 64 Pfam PF00158 Sigma-54 interaction domain 18 63 3.7E-14 T 25-04-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CLFO_RS09935 7cc4c9781ece9bfa2806f74b8435ac0c 64 SUPERFAMILY SSF52540 20 63 8.75E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS05570 82445a104a237c250673001b7ac96e01 55 Pfam PF12655 Domain of unknown function (DUF3787) 4 55 4.2E-25 T 25-04-2017 IPR024209 Protein of unknown function DUF3787 CLFO_RS21265 179d06740ba40cb0a7522be127be5206 1193 Gene3D G3DSA:3.90.1440.10 953 1023 1.0E-4 T 25-04-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CLFO_RS21265 179d06740ba40cb0a7522be127be5206 1193 SUPERFAMILY SSF52540 51 87 9.03E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS21265 179d06740ba40cb0a7522be127be5206 1193 SUPERFAMILY SSF52540 225 338 9.03E-8 T 25-04-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLFO_RS15270 7db4dd342a28faf12bff5636b0d62b33 109 Gene3D G3DSA:1.20.1500.10 3 108 2.3E-18 T 25-04-2017 IPR023378 YheA/YmcA-like domain CLFO_RS15270 7db4dd342a28faf12bff5636b0d62b33 109 SUPERFAMILY SSF158622 2 107 2.49E-15 T 25-04-2017 IPR023378 YheA/YmcA-like domain CLFO_RS15270 7db4dd342a28faf12bff5636b0d62b33 109 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 4 105 2.0E-16 T 25-04-2017 IPR010368 Control of competence regulator ComK, YlbF/YmcA CLFO_RS16150 eee274a1bc6caf05f458660da8b73cdd 362 Pfam PF04015 Domain of unknown function (DUF362) 37 228 6.5E-43 T 25-04-2017 IPR007160 Domain of unknown function DUF362 CLFO_RS13245 128949af51605e6d5eb4a9c911e3288e 117 SUPERFAMILY SSF52218 1 65 7.33E-9 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS13245 128949af51605e6d5eb4a9c911e3288e 117 Gene3D G3DSA:3.40.50.360 1 65 6.1E-8 T 25-04-2017 IPR029039 Flavoprotein-like domain CLFO_RS09235 3b572947c1c840db449c51974fd6810a 102 Pfam PF09682 Bacteriophage holin of superfamily 6 (Holin_LLH) 5 96 1.4E-10 T 25-04-2017 IPR010026 Phage holin, LL-H family CLFO_RS17055 8c0e67c9b2d068c72d82a3feed38fb9a 119 Gene3D G3DSA:3.30.1380.10 9 117 2.1E-35 T 25-04-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 CLFO_RS17055 8c0e67c9b2d068c72d82a3feed38fb9a 119 Pfam PF08291 Peptidase M15 8 107 8.5E-28 T 25-04-2017 IPR013230 Peptidase M15A, C-terminal MetaCyc: PWY-6470 CLFO_RS17055 8c0e67c9b2d068c72d82a3feed38fb9a 119 SUPERFAMILY SSF55166 9 115 6.67E-32 T 25-04-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 CLFO_RS12700 4d46b78b3165d1f27af7d18d4cdc52d7 446 Pfam PF12704 MacB-like periplasmic core domain 21 288 1.8E-19 T 25-04-2017 IPR025857 MacB-like periplasmic core domain CLFO_RS12700 4d46b78b3165d1f27af7d18d4cdc52d7 446 Pfam PF02687 FtsX-like permease family 317 437 3.3E-18 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS03460 6a6bdfb133b2a3d9923f97a57af86ea3 58 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 13 51 7.1E-11 T 25-04-2017 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 CLFO_RS17240 592e65a79a570a6b8647c419e5050324 90 Pfam PF12645 Helix-turn-helix domain 12 76 1.7E-17 T 25-04-2017 IPR024760 Helix-turn-helix, conjugative transposon-like CLFO_RS17725 977fbdc0799ae86d5543c41edd09a531 83 Pfam PF12773 Double zinc ribbon 34 77 8.4E-12 T 25-04-2017 IPR025874 Double zinc ribbon CLFO_RS12730 2b628334f4e7a3b444bbc23482a03cf8 230 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 24 226 2.6E-28 T 25-04-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CLFO_RS04520 9639bc8d2ad5a1cb42827ba20a6c98e2 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 4.5E-17 T 25-04-2017 IPR012452 Protein of unknown function DUF1657 CLFO_RS20530 665a3b116e45e5f2abc6b2dcdc2e89e7 252 Gene3D G3DSA:3.30.70.270 179 239 5.0E-5 T 25-04-2017 CLFO_RS08945 7161e83aab7c8133a4500b437656d9ff 127 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 15 126 6.0E-24 T 25-04-2017 IPR023804 Protein of unknown function DUF3792, transmembrane CLFO_RS08945 7161e83aab7c8133a4500b437656d9ff 127 Pfam PF12670 Protein of unknown function (DUF3792) 11 123 2.1E-21 T 25-04-2017 IPR023804 Protein of unknown function DUF3792, transmembrane CLFO_RS04180 8ecec29e98dea9eb59f4565bea7cbbe7 89 Pfam PF01541 GIY-YIG catalytic domain 2 71 4.0E-15 T 25-04-2017 IPR000305 GIY-YIG nuclease superfamily CLFO_RS04180 8ecec29e98dea9eb59f4565bea7cbbe7 89 SUPERFAMILY SSF82771 1 70 1.96E-14 T 25-04-2017 IPR000305 GIY-YIG nuclease superfamily CLFO_RS09320 2e0873471fb33a61e826d97d25fb4d58 99 Pfam PF03956 Membrane protein of unknown function (DUF340) 8 85 1.1E-6 T 25-04-2017 IPR005642 Lysine exporter LysO CLFO_RS14440 09a60047d0940208121383f458382815 399 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 8 389 2.9E-77 T 25-04-2017 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLFO_RS14440 09a60047d0940208121383f458382815 399 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 220 389 9.0E-36 T 25-04-2017 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 CLFO_RS11730 4c9ff50b28d1f62cb3bfbb338f367e9b 372 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 8 366 2.5E-114 T 25-04-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CLFO_RS11730 4c9ff50b28d1f62cb3bfbb338f367e9b 372 Pfam PF01098 Cell cycle protein 11 367 6.0E-106 T 25-04-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CLFO_RS03895 33893812c7c13d8c3869859c9a18e397 254 SUPERFAMILY SSF51621 3 252 3.25E-69 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS03895 33893812c7c13d8c3869859c9a18e397 254 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 240 9.7E-37 T 25-04-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CLFO_RS03895 33893812c7c13d8c3869859c9a18e397 254 Gene3D G3DSA:3.20.20.60 3 251 1.7E-67 T 25-04-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CLFO_RS06475 3eb8ca65bb72d1e324c3a00fceda4743 421 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 1 420 31.344 T 25-04-2017 IPR021144 Uncharacterised protein family UPF0597 CLFO_RS06475 3eb8ca65bb72d1e324c3a00fceda4743 421 Pfam PF03313 Serine dehydratase alpha chain 178 413 2.9E-43 T 25-04-2017 IPR005130 Serine dehydratase-like, alpha subunit CLFO_RS06475 3eb8ca65bb72d1e324c3a00fceda4743 421 PIRSF PIRSF006054 1 421 2.0E-132 T 25-04-2017 IPR021144 Uncharacterised protein family UPF0597 CLFO_RS16845 9d6af55ccaf81f41e30919bf1552ff71 74 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 1 41 1.8E-6 T 25-04-2017 IPR004474 Cell envelope-related transcriptional attenuator domain CLFO_RS19440 d0c63dd4ab579e88b119f26d170ba2c1 67 Gene3D G3DSA:2.30.110.10 5 42 1.7E-6 T 25-04-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 CLFO_RS07815 48f285a87025f66aac4756adaab37a8c 497 Pfam PF07556 Protein of unknown function (DUF1538) 272 482 3.1E-66 T 25-04-2017 IPR011435 Protein of unknown function DUF1538 CLFO_RS07815 48f285a87025f66aac4756adaab37a8c 497 Pfam PF07556 Protein of unknown function (DUF1538) 18 228 1.1E-58 T 25-04-2017 IPR011435 Protein of unknown function DUF1538 CLFO_RS09855 6dce404eb5cba499d7ec3c3f5811c380 206 Pfam PF02163 Peptidase family M50 116 159 9.8E-9 T 25-04-2017 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 CLFO_RS05735 295a3a3b468c8e110cfeed4b16c26144 324 Pfam PF05107 CRISPR-associated protein Cas7 3 270 8.4E-43 T 25-04-2017 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C CLFO_RS14415 dae939408126048836a2a813c2757c5b 165 TIGRFAM TIGR02271 TIGR02271: conserved domain 39 152 8.9E-44 T 25-04-2017 IPR019060 Domain of unknown function DUF2382 CLFO_RS14415 dae939408126048836a2a813c2757c5b 165 Pfam PF09557 Domain of unknown function (DUF2382) 39 147 9.7E-29 T 25-04-2017 IPR019060 Domain of unknown function DUF2382 CLFO_RS06445 c5366923b15eb518ebe6c38d2a08b624 538 Pfam PF08757 CotH protein 103 403 1.8E-69 T 25-04-2017 IPR014867 Spore coat protein CotH CLFO_RS12585 1ad17942d202dafc7571906550533d1a 436 Pfam PF02687 FtsX-like permease family 307 429 5.0E-15 T 25-04-2017 IPR003838 ABC transporter permease protein domain GO:0016020 CLFO_RS12335 9854e3957a7722f25979101b37b6aa7d 435 Pfam PF01610 Transposase 4 160 2.4E-19 T 25-04-2017 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CLFO_RS12335 9854e3957a7722f25979101b37b6aa7d 435 Pfam PF01610 Transposase 274 423 5.9E-14 T 25-04-2017 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CLFO_RS00090 f469a4d4cb6ccf06031a6b912bc564ab 332 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 142 221 3.3E-13 T 25-04-2017 IPR010095 Transposase IS605, OrfB, C-terminal CLFO_RS07680 b561688b485836a60b4df1927ddbf04e 190 Gene3D G3DSA:1.10.10.700 26 92 3.4E-7 T 25-04-2017 CLFO_RS06435 a18052829fd0269c8336b6ad18ce1d0d 262 Pfam PF09359 VTC domain 7 232 5.4E-39 T 25-04-2017 IPR018966 VTC domain CLFO_RS05340 9eed2e187c8c17d3d863ebccade07d0e 310 Pfam PF04015 Domain of unknown function (DUF362) 42 244 1.1E-28 T 25-04-2017 IPR007160 Domain of unknown function DUF362 CLFO_RS06035 c90da211b6c047c55425a35aeba6c68a 87 Pfam PF08388 Group II intron, maturase-specific domain 8 49 3.5E-14 T 25-04-2017 IPR013597 Group II intron, maturase-specific CLFO_RS13605 2e939026639de56ac65ce1b9452cd3dd 57 SUPERFAMILY SSF140500 8 54 4.45E-8 T 25-04-2017 CLFO_RS13605 2e939026639de56ac65ce1b9452cd3dd 57 Pfam PF09388 Spo0E like sporulation regulatory protein 11 52 2.1E-5 T 25-04-2017 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 CLFO_RS20285 a9493ecd80ca73b7462f6911f9533151 440 Gene3D G3DSA:2.120.10.60 215 347 1.6E-5 T 25-04-2017 CLFO_RS20285 a9493ecd80ca73b7462f6911f9533151 440 Gene3D G3DSA:2.120.10.60 135 183 1.6E-5 T 25-04-2017 CLFO_RS20285 a9493ecd80ca73b7462f6911f9533151 440 Gene3D G3DSA:2.120.10.60 389 438 1.6E-5 T 25-04-2017 CLFO_RS20285 a9493ecd80ca73b7462f6911f9533151 440 SUPERFAMILY SSF82171 393 432 8.24E-6 T 25-04-2017 CLFO_RS20285 a9493ecd80ca73b7462f6911f9533151 440 SUPERFAMILY SSF82171 136 354 8.24E-6 T 25-04-2017 CLFO_RS09605 aa7cc8a64dacc1930dabc98e0e6fc715 607 Pfam PF00395 S-layer homology domain 448 486 2.3E-7 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS09605 aa7cc8a64dacc1930dabc98e0e6fc715 607 Pfam PF00395 S-layer homology domain 508 546 2.5E-7 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS06390 5674479f5f2ba6ccf91df090a4540d71 179 Pfam PF08905 Domain of unknown function (DUF1850) 64 145 2.5E-19 T 25-04-2017 IPR015001 Protein of unknown function DUF1850 CLFO_RS13850 1e3ca6b7564782ac55d8d9ed9aff176c 227 Pfam PF04143 Sulphur transport 59 222 1.7E-33 T 25-04-2017 IPR007272 Sulphur transport domain CLFO_RS14770 70ddce9bd7be59ab6cec865a6f38b2a9 210 SUPERFAMILY SSF56507 20 183 2.62E-12 T 25-04-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CLFO_RS20880 64a3009906806dc48d6c92830b7ad73a 221 SUPERFAMILY SSF56037 113 203 8.89E-6 T 25-04-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 CLFO_RS11650 8467c7a22e8ef86c6930aec7d7f0fe0f 240 Pfam PF07758 Protein of unknown function (DUF1614) 49 188 2.6E-11 T 25-04-2017 IPR011672 Protein of unknown function DUF1614 CLFO_RS15750 ac4c3139f81ac67b43fc2adee7bdf345 196 Pfam PF12952 Domain of unknown function (DUF3841) 14 193 6.4E-64 T 25-04-2017 IPR024211 Protein of unknown function DUF3841 CLFO_RS03915 f428852ed59f85562b31c533187cc571 134 Gene3D G3DSA:1.10.287.950 39 122 1.9E-4 T 25-04-2017 CLFO_RS14485 bfcb07ffd6b6b2322a5c5d62533d7e5a 222 Pfam PF13346 ABC-2 family transporter protein 3 217 4.2E-29 T 25-04-2017 IPR025699 ABC-2 membrane transporter-like CLFO_RS00500 c12f44bdbe35ef83a9aa50605c762d8f 517 Pfam PF03806 AbgT putative transporter family 16 515 1.1E-204 T 25-04-2017 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 CLFO_RS19325 1d5bd2f615a5b90d62ace472865ff112 426 Pfam PF11449 Putative, 10TM heavy-metal exporter 7 415 2.7E-94 T 25-04-2017 IPR021552 Putative, 10TM heavy-metal exporter CLFO_RS20275 bb607d501e9f9437d938c3e3bbf60ba0 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 137 6.5E-20 T 25-04-2017 IPR006750 Putative inner membrane exporter, YdcZ CLFO_RS02635 41a17ea61d40e4af6de24c526287cb02 176 Pfam PF12822 Protein of unknown function (DUF3816) 4 159 3.6E-15 T 25-04-2017 IPR024529 ECF transporter, substrate-specific component GO:0005215 CLFO_RS15565 66e7b59894d30cf613af02efc10efbb3 460 Pfam PF04293 SpoVR like protein 4 396 2.9E-142 T 25-04-2017 IPR007390 Sporulation stage V, protein R CLFO_RS20935 e7ad3d9a66080550555f2de4cded1391 649 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 173 317 1.8E-10 T 25-04-2017 IPR000477 Reverse transcriptase domain CLFO_RS12840 db91bb7bea9f1f5147f1787c5f336a60 305 Pfam PF16138 Domain of unknown function (4846) 67 303 1.5E-108 T 25-04-2017 IPR032315 Protein of unknown function DUF4846 CLFO_RS12295 ae7484cb4d8651f458acf41e8275efeb 96 Pfam PF02096 60Kd inner membrane protein 2 82 8.1E-20 T 25-04-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CLFO_RS09030 181b986f162aefac178fdc0a648b3ad2 147 PIRSF PIRSF004923 1 147 7.7E-34 T 25-04-2017 IPR026268 Protein RseC CLFO_RS09030 181b986f162aefac178fdc0a648b3ad2 147 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 7 137 1.1E-31 T 25-04-2017 IPR007359 Positive regulator of sigma(E), RseC/MucC CLFO_RS01640 9cc270d4ef5efd4ec9f54bb6b7542fd9 158 Pfam PF03773 Predicted permease 36 157 2.6E-8 T 25-04-2017 IPR005524 Predicted permease DUF318 CLFO_RS20255 cbb45c5b38d936687a372733465d9a03 392 Pfam PF01594 Domain of unknown function DUF20 35 370 3.6E-68 T 25-04-2017 IPR002549 Transmembrane protein TqsA-like CLFO_RS03135 533010e79094a8b1082a03088eb18653 328 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 4 218 5.8E-59 T 25-04-2017 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLFO_RS09595 94b9ff0400751f89182944c139ec1bd2 187 Pfam PF05137 Fimbrial assembly protein (PilN) 112 177 6.9E-6 T 25-04-2017 IPR007813 Fimbrial assembly PilN CLFO_RS16025 d537b42ffae28b73a782372cf4243ef1 331 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 9 326 6.2E-33 T 25-04-2017 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLFO_RS04525 2d7f9e30e72c113c91c6d65a5984c1ab 286 Gene3D G3DSA:3.30.240.20 81 154 1.6E-23 T 25-04-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLFO_RS04525 2d7f9e30e72c113c91c6d65a5984c1ab 286 Pfam PF07870 Protein of unknown function (DUF1657) 237 284 3.8E-16 T 25-04-2017 IPR012452 Protein of unknown function DUF1657 CLFO_RS04525 2d7f9e30e72c113c91c6d65a5984c1ab 286 Pfam PF04239 Protein of unknown function (DUF421) 89 203 1.5E-30 T 25-04-2017 IPR007353 Protein of unknown function DUF421 CLFO_RS04525 2d7f9e30e72c113c91c6d65a5984c1ab 286 Gene3D G3DSA:3.30.240.20 169 227 2.1E-16 T 25-04-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLFO_RS21050 5f5a22054e7c647e439f6d2309d51917 94 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 20 89 1.1E-9 T 25-04-2017 IPR008792 Coenzyme PQQ synthesis D CLFO_RS17250 255ff9d31943769dbc8e09fa61b2d376 120 Pfam PF05713 Bacterial mobilisation protein (MobC) 60 100 3.7E-7 T 25-04-2017 IPR008687 Bacterial mobilisation CLFO_RS16265 ff996327097ea1a6280f9fb0da45fdac 116 Pfam PF03811 InsA N-terminal domain 23 50 9.1E-8 T 25-04-2017 IPR003220 InsA N-terminal domain GO:0006313 CLFO_RS16135 e0566ae594ee32cb874c78de95a9b91c 343 PIRSF PIRSF006470 9 341 3.2E-125 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS16135 e0566ae594ee32cb874c78de95a9b91c 343 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 43 298 1.4E-88 T 25-04-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CLFO_RS16135 e0566ae594ee32cb874c78de95a9b91c 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 325 2.5E-101 T 25-04-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CLFO_RS15840 24b662d8c916380709be0184e205b2df 1030 Pfam PF13799 Domain of unknown function (DUF4183) 960 1024 5.4E-14 T 25-04-2017 IPR025237 Domain of unknown function DUF4183 CLFO_RS15840 24b662d8c916380709be0184e205b2df 1030 Pfam PF13799 Domain of unknown function (DUF4183) 36 100 2.4E-16 T 25-04-2017 IPR025237 Domain of unknown function DUF4183 CLFO_RS15840 24b662d8c916380709be0184e205b2df 1030 Pfam PF13799 Domain of unknown function (DUF4183) 864 934 1.5E-17 T 25-04-2017 IPR025237 Domain of unknown function DUF4183 CLFO_RS02950 058f55e231e0e99edd03ded2dad39798 216 Pfam PF08281 Sigma-70, region 4 120 164 1.2E-8 T 25-04-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS02950 058f55e231e0e99edd03ded2dad39798 216 SUPERFAMILY SSF88659 118 165 2.62E-9 T 25-04-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CLFO_RS02950 058f55e231e0e99edd03ded2dad39798 216 Gene3D G3DSA:1.10.10.10 120 165 9.2E-7 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS07715 f0f4b202151a247417c224c1905fbb07 252 Pfam PF04233 Phage Mu protein F like protein 149 247 2.3E-9 T 25-04-2017 IPR006528 Phage head morphogenesis domain CLFO_RS07715 f0f4b202151a247417c224c1905fbb07 252 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 149 252 1.2E-12 T 25-04-2017 IPR006528 Phage head morphogenesis domain CLFO_RS06345 8a1e800fe7fb2c3125f981d526529d00 69 Pfam PF11213 Protein of unknown function (DUF3006) 3 67 5.5E-18 T 25-04-2017 IPR021377 Protein of unknown function DUF3006 CLFO_RS08140 eb275aeca3b6c9f6fd7d65d00cd10ec4 56 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 4 52 5.2E-11 T 25-04-2017 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 CLFO_RS11495 2b2378b7b84fdca2a0fda3cd627337a4 93 Pfam PF02325 YGGT family 13 84 1.3E-17 T 25-04-2017 IPR003425 CCB3/YggT GO:0016020 CLFO_RS20330 038ff445afecf69efa74f333a18eb9d8 110 Gene3D G3DSA:3.10.20.30 18 81 7.9E-9 T 25-04-2017 IPR012675 Beta-grasp domain CLFO_RS20330 038ff445afecf69efa74f333a18eb9d8 110 SUPERFAMILY SSF54285 16 81 5.67E-7 T 25-04-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLFO_RS16385 9e2e3ec2ae09a8f25138ea20718ae3d2 449 Pfam PF01098 Cell cycle protein 84 441 5.2E-43 T 25-04-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CLFO_RS01985 71fbc5ac8973f4c171264a85bc1005f8 454 Pfam PF13421 SPFH domain-Band 7 family 27 234 4.8E-44 T 25-04-2017 CLFO_RS01985 71fbc5ac8973f4c171264a85bc1005f8 454 Pfam PF12773 Double zinc ribbon 355 398 6.7E-7 T 25-04-2017 IPR025874 Double zinc ribbon CLFO_RS01985 71fbc5ac8973f4c171264a85bc1005f8 454 Pfam PF12773 Double zinc ribbon 404 450 2.9E-9 T 25-04-2017 IPR025874 Double zinc ribbon CLFO_RS14205 ad911cb24867826eddfb14f282bc9486 442 Pfam PF01554 MatE 17 174 1.5E-16 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS14205 ad911cb24867826eddfb14f282bc9486 442 Pfam PF01554 MatE 233 393 4.8E-17 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS14205 ad911cb24867826eddfb14f282bc9486 442 PIRSF PIRSF006603 3 441 2.2E-54 T 25-04-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CLFO_RS01280 a4a023b515b9d37d6645d8dd095e7730 358 Pfam PF00395 S-layer homology domain 188 230 4.4E-15 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS01280 a4a023b515b9d37d6645d8dd095e7730 358 Pfam PF00395 S-layer homology domain 247 288 6.1E-14 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS01280 a4a023b515b9d37d6645d8dd095e7730 358 Pfam PF00395 S-layer homology domain 308 348 1.7E-11 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS20065 c0c243f80b25bedefd0d2b1ed87cf321 476 PIRSF PIRSF005690 2 476 2.7E-146 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS20065 c0c243f80b25bedefd0d2b1ed87cf321 476 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 17 467 1.8E-143 T 25-04-2017 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 CLFO_RS01300 bf4e89054b78886e2c0220681fe5aa6e 223 SMART SM00909 123 207 2.1E-15 T 25-04-2017 IPR019606 GerMN domain CLFO_RS01300 bf4e89054b78886e2c0220681fe5aa6e 223 Pfam PF10646 Sporulation and spore germination 89 203 1.4E-16 T 25-04-2017 IPR019606 GerMN domain CLFO_RS07440 00a02298d4783706d47ea30c24acaa18 334 SUPERFAMILY SSF69279 26 158 1.02E-7 T 25-04-2017 CLFO_RS15225 61fa293d8bc3682d513896a1233468c0 107 Pfam PF09350 Domain of unknown function (DUF1992) 5 66 3.5E-20 T 25-04-2017 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain CLFO_RS03030 a2ec24a559b7e51ecc0ba8af42ada00f 174 Pfam PF02417 Chromate transporter 5 169 3.9E-47 T 25-04-2017 IPR003370 Chromate transporter GO:0015109|GO:0015703 CLFO_RS17225 b65c9e3060f2aad40baa856892a99537 154 Pfam PF06114 Domain of unknown function (DUF955) 28 138 5.0E-10 T 25-04-2017 IPR010359 HTH domain, IrrE-type CLFO_RS14600 2d36f8639c73f71490bb5fd3957a8196 497 Pfam PF02386 Cation transport protein 307 481 3.7E-18 T 25-04-2017 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CLFO_RS14600 2d36f8639c73f71490bb5fd3957a8196 497 Pfam PF02386 Cation transport protein 62 265 2.5E-27 T 25-04-2017 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CLFO_RS03175 837a5ac8da4502df53c44db78ec7ec5b 100 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 2 98 6.4E-35 T 25-04-2017 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 CLFO_RS04875 d28cbf3a41054a49e081786bd137a8d2 195 Pfam PF09819 ABC-type cobalt transport system, permease component 23 142 7.3E-10 T 25-04-2017 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted CLFO_RS21120 3f68bf6ae0442d343b5f2c4c2cffd9c6 93 Pfam PF12643 MazG-like family 1 81 1.9E-22 T 25-04-2017 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 CLFO_RS07695 091f0cdc1bd84223ee7981ea72f93e5d 206 Pfam PF12952 Domain of unknown function (DUF3841) 5 198 8.2E-38 T 25-04-2017 IPR024211 Protein of unknown function DUF3841 CLFO_RS05150 68681e85882a8e57d4bf9d09397e7a68 65 Pfam PF11007 Spore coat associated protein JA (CotJA) 21 54 8.7E-16 T 25-04-2017 IPR020256 Spore coat protein CotJA CLFO_RS00115 b3b73689960c526d3cd75df124215281 349 Pfam PF13303 Phosphotransferase system, EIIC 16 347 6.4E-109 T 25-04-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CLFO_RS05730 f3385ed25dab34f3058527f9b49dc31d 573 TIGRFAM TIGR02591 cas_Csh1: CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI 173 560 2.9E-57 T 25-04-2017 IPR013420 CRISPR-associated protein Csh1, C-terminal CLFO_RS08770 b44bce7e7ad58413ec75798a86730120 571 Pfam PF03354 Phage Terminase 107 547 1.3E-55 T 25-04-2017 IPR005021 Phage terminase CLFO_RS21370 152d31109ccfdde4901515c6d421b6e9 86 Pfam PF03698 Uncharacterised protein family (UPF0180) 2 79 1.0E-19 T 25-04-2017 IPR005370 Uncharacterised protein family UPF0180 CLFO_RS16970 67e10865668b90f9f33eb4ea3191fa19 62 Pfam PF14205 Cysteine-rich KTR 4 57 2.3E-32 T 25-04-2017 IPR025957 Cysteine-rich KTR CLFO_RS07415 782f6a4b14e120bf2d5b5b9e2731c152 365 Pfam PF04984 Phage tail sheath protein 67 364 6.5E-26 T 25-04-2017 IPR007067 Tail sheath protein CLFO_RS18580 0ad5b4534ab7b7dca63ac0d0cf910a94 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 291 9.7E-32 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS14465 6c73211cce12384f3c41ba443d493418 70 Gene3D G3DSA:1.20.1260.10 3 65 1.1E-6 T 25-04-2017 IPR012347 Ferritin-related CLFO_RS00300 4a2a7490f4aeb73e110b6a931670a309 167 Pfam PF12822 Protein of unknown function (DUF3816) 13 160 6.5E-11 T 25-04-2017 IPR024529 ECF transporter, substrate-specific component GO:0005215 CLFO_RS08810 2245e03cb4e39ea9aa4599e6bfa17cb5 129 Pfam PF11367 Protein of unknown function (DUF3168) 24 89 6.1E-11 T 25-04-2017 IPR021508 Protein of unknown function DUF3168 CLFO_RS02225 d7ff4d29421c3e475ae81809317ccd8e 324 Pfam PF14285 Domain of unknown function (DUF4367) 213 323 1.8E-15 T 25-04-2017 IPR025377 Domain of unknown function DUF4367 CLFO_RS17505 a9eae6a6be869db7182473681af8236b 502 Pfam PF00474 Sodium:solute symporter family 40 436 5.8E-38 T 25-04-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CLFO_RS17345 ae880e142ef51e8378324c2e31da76cc 196 Pfam PF14283 Domain of unknown function (DUF4366) 114 185 4.3E-10 T 25-04-2017 IPR025376 Domain of unknown function DUF4366 CLFO_RS17345 ae880e142ef51e8378324c2e31da76cc 196 Pfam PF14283 Domain of unknown function (DUF4366) 32 97 2.0E-13 T 25-04-2017 IPR025376 Domain of unknown function DUF4366 CLFO_RS01305 1a85ba93aa57641109dbe9dc25de5b33 308 Pfam PF03547 Membrane transport protein 162 304 3.5E-18 T 25-04-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CLFO_RS01305 1a85ba93aa57641109dbe9dc25de5b33 308 Pfam PF03547 Membrane transport protein 7 156 8.3E-21 T 25-04-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CLFO_RS01470 17d47ac27f56b73ecfb9edb1ecc92012 645 Pfam PF08484 C-methyltransferase C-terminal domain 18 104 3.4E-5 T 25-04-2017 IPR013691 C-methyltransferase CLFO_RS16935 79f0dff75eb30d492267318162e59b8d 541 Pfam PF03050 Transposase IS66 family 191 481 2.6E-89 T 25-04-2017 IPR004291 Transposase, IS66 CLFO_RS16935 79f0dff75eb30d492267318162e59b8d 541 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 171 4.9E-12 T 25-04-2017 IPR024474 Zinc-finger binding domain of transposase IS66 CLFO_RS09965 6c923defd840dd54807335e9adf4e3b4 385 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 2 383 5.1E-148 T 25-04-2017 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CLFO_RS18245 9fba26521ce7ddeeea8c5f1cd7f6296f 325 Pfam PF13490 Putative zinc-finger 6 36 4.6E-7 T 25-04-2017 IPR027383 Putative zinc-finger CLFO_RS10330 8943abe361c7d77ff1ec04e2161b8bd8 81 Pfam PF10779 Haemolysin XhlA 13 78 1.4E-22 T 25-04-2017 IPR019715 Haemolysin XhlA CLFO_RS18585 02dee04f1194e4d71fa6ec830f47536b 369 Pfam PF02653 Branched-chain amino acid transport system / permease component 72 347 1.6E-38 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS14990 5ecb160549ffb1060586e1b952f33475 260 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 49 174 3.2E-32 T 25-04-2017 IPR003709 Peptidase M15B GO:0006508|GO:0008233 CLFO_RS14990 5ecb160549ffb1060586e1b952f33475 260 SUPERFAMILY SSF55166 41 181 3.92E-27 T 25-04-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 CLFO_RS17800 55771ce10e4c9876a21b8956414f7852 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 278 5.4E-48 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS15300 bcd1a0c3ea335c9755ebe7f9657c107f 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 319 7.1E-18 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS10145 95c5679551d47d038bb4c5a4c1d04b30 129 SUPERFAMILY SSF46785 2 82 7.65E-22 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10145 95c5679551d47d038bb4c5a4c1d04b30 129 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 6.6E-16 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS10145 95c5679551d47d038bb4c5a4c1d04b30 129 Gene3D G3DSA:1.10.10.10 2 73 1.8E-26 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS10145 95c5679551d47d038bb4c5a4c1d04b30 129 SMART SM00345 13 72 5.9E-18 T 25-04-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CLFO_RS08605 fac92801ba16b236c2ddef8266be0ea4 292 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 4 290 3.0E-110 T 25-04-2017 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CLFO_RS08605 fac92801ba16b236c2ddef8266be0ea4 292 Pfam PF03313 Serine dehydratase alpha chain 16 276 1.4E-76 T 25-04-2017 IPR005130 Serine dehydratase-like, alpha subunit CLFO_RS16080 233d20cb921c33729c66e82bbd2165e1 419 Gene3D G3DSA:3.40.50.1000 231 289 5.5E-4 T 25-04-2017 IPR023214 HAD-like domain CLFO_RS15290 26506fced7bde82ffdff03b9bd39740a 385 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 35 379 3.0E-88 T 25-04-2017 IPR010327 FldB/FldC dehydratase alpha/beta subunit CLFO_RS11705 14ea906d219791c1995948e93e8ed1b1 240 Pfam PF05949 Bacterial protein of unknown function (DUF881) 89 234 1.5E-41 T 25-04-2017 IPR010273 Protein of unknown function DUF881 CLFO_RS10495 991f30ff3035bb83c379e420fa117cfe 253 Pfam PF16784 Putative HNHc nuclease 60 234 1.5E-40 T 25-04-2017 IPR031879 Fanconi anemia group M protein, MHF binding domain Reactome: R-HSA-6783310 CLFO_RS17420 bb080b9780f7cd88975eb3d0f6f5ba1f 131 Pfam PF04186 FxsA cytoplasmic membrane protein 7 112 6.6E-34 T 25-04-2017 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CLFO_RS06470 12972704bdab78ba4d0209754d29a3cc 167 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 27 163 5.6E-16 T 25-04-2017 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase CLFO_RS14275 f8ff4652734b28478d6687df146fdfb9 105 Pfam PF06961 Protein of unknown function (DUF1294) 26 80 1.7E-22 T 25-04-2017 IPR010718 Protein of unknown function DUF1294 CLFO_RS00520 7e35501dd19301fc57f921631e1130e3 579 Pfam PF08757 CotH protein 87 427 6.4E-66 T 25-04-2017 IPR014867 Spore coat protein CotH CLFO_RS00425 2b503007de2897f696c8251edab477c1 191 Pfam PF07670 Nucleoside recognition 42 147 4.5E-10 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS01420 1a8e2ac9c4de4fef39dbe5a58d2817b4 92 Gene3D G3DSA:1.10.1200.10 16 89 8.4E-5 T 25-04-2017 IPR009081 Phosphopantetheine binding ACP domain CLFO_RS00640 5bafc90e5844f5e952c515640180d0c2 933 Pfam PF00395 S-layer homology domain 52 92 5.2E-8 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS00640 5bafc90e5844f5e952c515640180d0c2 933 Pfam PF00395 S-layer homology domain 233 277 4.7E-7 T 25-04-2017 IPR001119 S-layer homology domain CLFO_RS09875 2bd59809eaf6d8345b479b963da531d0 218 Pfam PF11167 Protein of unknown function (DUF2953) 134 177 1.7E-11 T 25-04-2017 IPR021338 Protein of unknown function DUF2953 CLFO_RS14435 e719ee725407297f6faf5fda63a6aa84 366 Pfam PF03845 Spore germination protein 6 319 1.2E-34 T 25-04-2017 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CLFO_RS19520 1a6da351311570fd830410380296a2be 58 Pfam PF07561 Domain of Unknown Function (DUF1540) 13 52 1.2E-13 T 25-04-2017 IPR011437 Domain of unknown function DUF1540 CLFO_RS14395 4178d7c33d34db5c0bdab316cdeacaf2 120 Pfam PF07875 Coat F domain 19 80 3.1E-15 T 25-04-2017 IPR012851 Spore coat protein CotF-like CLFO_RS21350 12773a8a22f7403048d1c852fdf69ce0 227 Pfam PF02674 Colicin V production protein 6 62 1.7E-11 T 25-04-2017 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CLFO_RS21350 12773a8a22f7403048d1c852fdf69ce0 227 Pfam PF02674 Colicin V production protein 118 220 2.9E-13 T 25-04-2017 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CLFO_RS07455 3446243561e29b168160f8e15c0ef2f9 344 Pfam PF04865 Baseplate J-like protein 57 300 1.3E-65 T 25-04-2017 IPR006949 Baseplate protein J-like CLFO_RS09035 7733eafa987837da70a8d5b5df214f23 143 Pfam PF12821 Threonine/Serine exporter, ThrE 6 132 5.7E-35 T 25-04-2017 IPR024528 Threonine/Serine exporter, ThrE CLFO_RS14245 dafb1c375a72d3a6f6e7c1e3d4a36d2d 114 Gene3D G3DSA:1.10.10.10 5 67 9.8E-4 T 25-04-2017 IPR011991 Winged helix-turn-helix DNA-binding domain CLFO_RS19400 a56aa98ae9b2fc1171e4f6902b2d299d 203 Pfam PF07670 Nucleoside recognition 43 150 1.7E-11 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS01615 9c3fc21508bcf51158999ff9f56fd198 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 3.3E-49 T 25-04-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CLFO_RS07540 2ecbcca9d70ed66d4e72bccdb2d509c2 331 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 13 181 2.0E-27 T 25-04-2017 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CLFO_RS17255 042237bfb49a5f7db26f60c7d5bd9e5e 439 Pfam PF03432 Relaxase/Mobilisation nuclease domain 58 243 5.4E-40 T 25-04-2017 IPR005094 Endonuclease relaxase, MobA/VirD2 CLFO_RS01945 63a002608f79dfa19e3cf23b5eb70589 69 SUPERFAMILY SSF47240 10 67 1.62E-5 T 25-04-2017 IPR009078 Ferritin-like superfamily CLFO_RS19395 0b0b2f788b00a8c9ceaaa3eb6acdf128 178 Pfam PF07670 Nucleoside recognition 48 147 1.3E-5 T 25-04-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CLFO_RS19450 21d4faf005cdcd954ad69379ff5a09a3 336 Pfam PF01758 Sodium Bile acid symporter family 50 235 3.2E-26 T 25-04-2017 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CLFO_RS03140 698cf25bbecbcc3e632bdf2ac858bebb 369 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 8 238 1.2E-10 T 25-04-2017 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLFO_RS17470 e2a9c0e78bd002169c92d895b1b01d60 218 Pfam PF07796 Protein of unknown function (DUF1638) 30 194 3.8E-43 T 25-04-2017 IPR012437 Domain of unknown function DUF1638 CLFO_RS21395 1d5d21b0521e87c5b1df50bb85479128 89 Pfam PF01169 Uncharacterized protein family UPF0016 6 81 2.0E-21 T 25-04-2017 IPR001727 Gdt1 family GO:0032472 CLFO_RS04085 ca4d0ac83c4f06a9eb3bee1111a773ca 439 Gene3D G3DSA:2.60.120.260 346 436 4.9E-5 T 25-04-2017 IPR008979 Galactose-binding domain-like CLFO_RS07445 c21d9f0306154c918fe331e33129503c 132 Pfam PF10844 Protein of unknown function (DUF2577) 14 128 3.6E-14 T 25-04-2017 IPR022555 Protein of unknown function, DUF2577