locus-tag class description CLJU_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CLJU_RS00005 PF11638 DnaA N-terminal domain CLJU_RS00005 PF00308 Bacterial dnaA protein CLJU_RS00010 PF02767 DNA polymerase III beta subunit, central domain CLJU_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CLJU_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CLJU_RS00020 PF02463 RecF/RecN/SMC N terminal domain CLJU_RS00030 PF00204 DNA gyrase B CLJU_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus CLJU_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS00030 PF01751 Toprim domain CLJU_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller CLJU_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A CLJU_RS00065 PF08279 HTH domain CLJU_RS00065 PF02829 3H domain CLJU_RS00070 PF03699 Uncharacterised protein family (UPF0182) CLJU_RS00075 PF01266 FAD dependent oxidoreductase CLJU_RS00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLJU_RS00085 PF02403 Seryl-tRNA synthetase N-terminal domain CLJU_RS00105 PF00589 Phage integrase family CLJU_RS00105 PF14659 Phage integrase, N-terminal SAM-like domain CLJU_RS00180 PF10668 Phage terminase small subunit CLJU_RS00180 PF03592 Terminase small subunit CLJU_RS00205 PF01464 Transglycosylase SLT domain CLJU_RS00230 PF01381 Helix-turn-helix CLJU_RS00275 PF04191 Phospholipid methyltransferase CLJU_RS00280 PF01047 MarR family CLJU_RS00280 PF00583 Acetyltransferase (GNAT) family CLJU_RS00290 PF00701 Dihydrodipicolinate synthetase family CLJU_RS00295 PF00920 Dehydratase family CLJU_RS00300 PF02447 GntP family permease CLJU_RS00305 PF07883 Cupin domain CLJU_RS00310 PF12833 Helix-turn-helix domain CLJU_RS00310 PF06445 GyrI-like small molecule binding domain CLJU_RS00320 PF01116 Fructose-bisphosphate aldolase class-II CLJU_RS00330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CLJU_RS00330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CLJU_RS00340 PF02666 Phosphatidylserine decarboxylase CLJU_RS00345 PF17922 Tetracyclin repressor-like, C-terminal domain CLJU_RS00345 PF00440 Bacterial regulatory proteins, tetR family CLJU_RS00350 PF03109 ABC1 family CLJU_RS00365 PF14437 MafB19-like deaminase CLJU_RS00385 PF00005 ABC transporter CLJU_RS00390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS00390 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS00395 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS00395 PF00072 Response regulator receiver domain CLJU_RS00410 PF12169 DNA polymerase III subunits gamma and tau domain III CLJU_RS00415 PF02575 YbaB/EbfC DNA-binding family CLJU_RS00420 PF02132 RecR protein CLJU_RS00420 PF13662 Toprim domain CLJU_RS00435 PF03749 Sugar fermentation stimulation protein RE domain CLJU_RS00435 PF17746 SfsA N-terminal OB domain CLJU_RS00440 PF00293 NUDIX domain CLJU_RS00440 PF09297 NADH pyrophosphatase zinc ribbon domain CLJU_RS00445 PF01070 FMN-dependent dehydrogenase CLJU_RS00465 PF00266 Aminotransferase class-V CLJU_RS00470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLJU_RS00470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLJU_RS00480 PF13302 Acetyltransferase (GNAT) domain CLJU_RS00510 PF00072 Response regulator receiver domain CLJU_RS00510 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS00515 PF00989 PAS fold CLJU_RS00515 PF18698 Histidine kinase sensor domain CLJU_RS00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS00515 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS00515 PF00672 HAMP domain CLJU_RS00520 PF00005 ABC transporter CLJU_RS00530 PF05343 M42 glutamyl aminopeptidase CLJU_RS00535 PF05343 M42 glutamyl aminopeptidase CLJU_RS00540 PF05343 M42 glutamyl aminopeptidase CLJU_RS00550 PF00266 Aminotransferase class-V CLJU_RS00575 PF00639 PPIC-type PPIASE domain CLJU_RS00580 PF01263 Aldose 1-epimerase CLJU_RS00585 PF11762 L-arabinose isomerase C-terminal domain CLJU_RS00585 PF02610 L-arabinose isomerase CLJU_RS00590 PF00596 Class II Aldolase and Adducin N-terminal domain CLJU_RS00600 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS00605 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CLJU_RS00615 PF13407 Periplasmic binding protein domain CLJU_RS00620 PF00005 ABC transporter CLJU_RS00625 PF02653 Branched-chain amino acid transport system / permease component CLJU_RS00645 PF02146 Sir2 family CLJU_RS00660 PF02016 LD-carboxypeptidase N-terminal domain CLJU_RS00660 PF17676 LD-carboxypeptidase C-terminal domain CLJU_RS00675 PF01276 Orn/Lys/Arg decarboxylase, major domain CLJU_RS00675 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLJU_RS00680 PF02223 Thymidylate kinase CLJU_RS00685 PF06153 Cyclic-di-AMP receptor CLJU_RS00690 PF09115 DNA polymerase III, delta subunit, C terminal CLJU_RS00695 PF04468 PSP1 C-terminal conserved region CLJU_RS00705 PF12838 4Fe-4S dicluster domain CLJU_RS00710 PF01618 MotA/TolQ/ExbB proton channel family CLJU_RS00715 PF13677 Membrane MotB of proton-channel complex MotA/MotB CLJU_RS00715 PF00691 OmpA family CLJU_RS00720 PF05175 Methyltransferase small domain CLJU_RS00725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLJU_RS00730 PF00877 NlpC/P60 family CLJU_RS00735 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CLJU_RS00735 PF00877 NlpC/P60 family CLJU_RS00740 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLJU_RS00740 PF18277 AbrB C-terminal domain CLJU_RS00745 PF01368 DHH family CLJU_RS00745 PF02272 DHHA1 domain CLJU_RS00745 PF01743 Poly A polymerase head domain CLJU_RS00745 PF00571 CBS domain CLJU_RS00755 PF04012 PspA/IM30 family CLJU_RS00770 PF02542 YgbB family CLJU_RS00775 PF01522 Polysaccharide deacetylase CLJU_RS00780 PF01522 Polysaccharide deacetylase CLJU_RS00785 PF00893 Small Multidrug Resistance protein CLJU_RS00805 PF02371 Transposase IS116/IS110/IS902 family CLJU_RS00805 PF01548 Transposase CLJU_RS00810 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CLJU_RS00810 PF13457 GW (Gly-Tryp) dipeptide domain CLJU_RS00825 PF07670 Nucleoside recognition CLJU_RS00830 PF07670 Nucleoside recognition CLJU_RS00835 PF03167 Uracil DNA glycosylase superfamily CLJU_RS00840 PF09334 tRNA synthetases class I (M) CLJU_RS00840 PF01588 Putative tRNA binding domain CLJU_RS00845 PF01026 TatD related DNase CLJU_RS00850 PF07501 G5 domain CLJU_RS00850 PF03990 G5-linked-Ubiquitin-like domain CLJU_RS00850 PF06725 3D domain CLJU_RS00855 PF01751 Toprim domain CLJU_RS00855 PF13331 Domain of unknown function (DUF4093) CLJU_RS00860 PF00398 Ribosomal RNA adenine dimethylase CLJU_RS00880 PF10609 NUBPL iron-transfer P-loop NTPase CLJU_RS00895 PF03477 ATP cone domain CLJU_RS00895 PF13597 Anaerobic ribonucleoside-triphosphate reductase CLJU_RS00905 PF01022 Bacterial regulatory protein, arsR family CLJU_RS00915 PF01520 N-acetylmuramoyl-L-alanine amidase CLJU_RS00920 PF08264 Anticodon-binding domain of tRNA CLJU_RS00920 PF00133 tRNA synthetases class I (I, L, M and V) CLJU_RS00925 PF00356 Bacterial regulatory proteins, lacI family CLJU_RS00930 PF09335 SNARE associated Golgi protein CLJU_RS00935 PF13195 Protein of unknown function (DUF4011) CLJU_RS00935 PF13087 AAA domain CLJU_RS00935 PF13086 AAA domain CLJU_RS00940 PF00483 Nucleotidyl transferase CLJU_RS00940 PF01050 Mannose-6-phosphate isomerase CLJU_RS00945 PF01541 GIY-YIG catalytic domain CLJU_RS00950 PF02245 Methylpurine-DNA glycosylase (MPG) CLJU_RS00955 PF01969 Protein of unknown function DUF111 CLJU_RS00965 PF13416 Bacterial extracellular solute-binding protein CLJU_RS00970 PF13439 Glycosyltransferase Family 4 CLJU_RS00970 PF00534 Glycosyl transferases group 1 CLJU_RS00995 PF13439 Glycosyltransferase Family 4 CLJU_RS00995 PF00534 Glycosyl transferases group 1 CLJU_RS01005 PF05582 YabG peptidase U57 CLJU_RS01010 PF06257 Biofilm formation stimulator VEG CLJU_RS01015 PF01476 LysM domain CLJU_RS01020 PF03575 Peptidase family S51 CLJU_RS01025 PF08443 RimK-like ATP-grasp domain CLJU_RS01025 PF08245 Mur ligase middle domain CLJU_RS01025 PF02875 Mur ligase family, glutamate ligase domain CLJU_RS01030 PF08544 GHMP kinases C terminal CLJU_RS01030 PF00288 GHMP kinases N terminal domain CLJU_RS01040 PF03323 Bacillus/Clostridium GerA spore germination protein CLJU_RS01045 PF03845 Spore germination protein CLJU_RS01050 PF09551 Stage II sporulation protein R (spore_II_R) CLJU_RS01055 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CLJU_RS01055 PF04101 Glycosyltransferase family 28 C-terminal domain CLJU_RS01060 PF03413 Peptidase propeptide and YPEB domain CLJU_RS01060 PF14620 YpeB sporulation CLJU_RS01075 PF06418 CTP synthase N-terminus CLJU_RS01075 PF00117 Glutamine amidotransferase class-I CLJU_RS01085 PF07497 Rho termination factor, RNA-binding domain CLJU_RS01085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLJU_RS01085 PF07498 Rho termination factor, N-terminal domain CLJU_RS01090 PF01197 Ribosomal protein L31 CLJU_RS01095 PF07136 Protein of unknown function (DUF1385) CLJU_RS01100 PF05175 Methyltransferase small domain CLJU_RS01100 PF17827 PrmC N-terminal domain CLJU_RS01105 PF00472 RF-1 domain CLJU_RS01105 PF03462 PCRF domain CLJU_RS01120 PF03481 Putative GTP-binding controlling metal-binding CLJU_RS01120 PF01300 Telomere recombination CLJU_RS01125 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLJU_RS01130 PF02502 Ribose/Galactose Isomerase CLJU_RS01140 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLJU_RS01145 PF00953 Glycosyl transferase family 4 CLJU_RS01150 PF02350 UDP-N-acetylglucosamine 2-epimerase CLJU_RS01160 PF00119 ATP synthase A chain CLJU_RS01165 PF00137 ATP synthase subunit C CLJU_RS01170 PF00430 ATP synthase B/B' CF(0) CLJU_RS01175 PF00213 ATP synthase delta (OSCP) subunit CLJU_RS01180 PF00306 ATP synthase alpha/beta chain, C terminal domain CLJU_RS01180 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLJU_RS01180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLJU_RS01185 PF00231 ATP synthase CLJU_RS01190 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLJU_RS01190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLJU_RS01195 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CLJU_RS01195 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CLJU_RS01205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLJU_RS01210 PF08486 Stage II sporulation protein CLJU_RS01220 PF12116 Stage III sporulation protein D CLJU_RS01230 PF06866 Protein of unknown function (DUF1256) CLJU_RS01260 PF00438 S-adenosylmethionine synthetase, N-terminal domain CLJU_RS01260 PF02772 S-adenosylmethionine synthetase, central domain CLJU_RS01260 PF02773 S-adenosylmethionine synthetase, C-terminal domain CLJU_RS01265 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CLJU_RS01265 PF14490 Helix-hairpin-helix containing domain CLJU_RS01265 PF13538 UvrD-like helicase C-terminal domain CLJU_RS01280 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CLJU_RS01280 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CLJU_RS01285 PF07517 SecA DEAD-like domain CLJU_RS01285 PF02810 SEC-C motif CLJU_RS01285 PF01043 SecA preprotein cross-linking domain CLJU_RS01285 PF07516 SecA Wing and Scaffold domain CLJU_RS01290 PF00472 RF-1 domain CLJU_RS01290 PF03462 PCRF domain CLJU_RS01295 PF05977 Transmembrane secretion effector CLJU_RS01300 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLJU_RS01300 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CLJU_RS01310 PF17674 HHH domain CLJU_RS01310 PF16921 Tex protein YqgF-like domain CLJU_RS01310 PF09371 Tex-like protein N-terminal domain CLJU_RS01310 PF00575 S1 RNA binding domain CLJU_RS01315 PF12822 ECF transporter, substrate-specific component CLJU_RS01325 PF01312 FlhB HrpN YscU SpaS Family CLJU_RS01340 PF04607 Region found in RelA / SpoT proteins CLJU_RS01345 PF13603 Leucyl-tRNA synthetase, Domain 2 CLJU_RS01345 PF00133 tRNA synthetases class I (I, L, M and V) CLJU_RS01345 PF09334 tRNA synthetases class I (M) CLJU_RS01345 PF08264 Anticodon-binding domain of tRNA CLJU_RS01360 PF00684 DnaJ central domain CLJU_RS01360 PF01556 DnaJ C terminal domain CLJU_RS01360 PF00226 DnaJ domain CLJU_RS01375 PF01116 Fructose-bisphosphate aldolase class-II CLJU_RS01385 PF04239 Protein of unknown function (DUF421) CLJU_RS01390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLJU_RS01390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLJU_RS01390 PF03129 Anticodon binding domain CLJU_RS01390 PF02824 TGS domain CLJU_RS01395 PF00731 AIR carboxylase CLJU_RS01400 PF01740 STAS domain CLJU_RS01405 PF02743 Cache domain CLJU_RS01405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS01405 PF00672 HAMP domain CLJU_RS01410 PF13581 Histidine kinase-like ATPase domain CLJU_RS01425 PF01066 CDP-alcohol phosphatidyltransferase CLJU_RS01430 PF09335 SNARE associated Golgi protein CLJU_RS01435 PF00571 CBS domain CLJU_RS01440 PF00781 Diacylglycerol kinase catalytic domain CLJU_RS01450 PF08497 Radical SAM N-terminal CLJU_RS01450 PF04055 Radical SAM superfamily CLJU_RS01450 PF11842 Domain of unknown function (DUF3362) CLJU_RS01455 PF03448 MgtE intracellular N domain CLJU_RS01455 PF01769 Divalent cation transporter CLJU_RS01455 PF00571 CBS domain CLJU_RS01460 PF07486 Cell Wall Hydrolase CLJU_RS01460 PF01471 Putative peptidoglycan binding domain CLJU_RS01470 PF01648 4'-phosphopantetheinyl transferase superfamily CLJU_RS01475 PF03853 YjeF-related protein N-terminus CLJU_RS01475 PF01256 Carbohydrate kinase CLJU_RS01490 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CLJU_RS01495 PF00456 Transketolase, thiamine diphosphate binding domain CLJU_RS01500 PF02779 Transketolase, pyrimidine binding domain CLJU_RS01500 PF02780 Transketolase, C-terminal domain CLJU_RS01505 PF00005 ABC transporter CLJU_RS01510 PF18075 FtsX extracellular domain CLJU_RS01510 PF02687 FtsX-like permease family CLJU_RS01515 PF17820 PDZ domain CLJU_RS01515 PF01471 Putative peptidoglycan binding domain CLJU_RS01515 PF03572 Peptidase family S41 CLJU_RS01520 PF02163 Peptidase family M50 CLJU_RS01520 PF17820 PDZ domain CLJU_RS01525 PF00271 Helicase conserved C-terminal domain CLJU_RS01525 PF04851 Type III restriction enzyme, res subunit CLJU_RS01525 PF12344 Ultra-violet resistance protein B CLJU_RS01525 PF17757 UvrB interaction domain CLJU_RS01525 PF02151 UvrB/uvrC motif CLJU_RS01530 PF17760 UvrA interaction domain CLJU_RS01530 PF17755 UvrA DNA-binding domain CLJU_RS01540 PF01098 Cell cycle protein CLJU_RS01545 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS01555 PF12826 Helix-hairpin-helix motif CLJU_RS01555 PF01541 GIY-YIG catalytic domain CLJU_RS01555 PF02151 UvrB/uvrC motif CLJU_RS01555 PF08459 UvrC Helix-hairpin-helix N-terminal CLJU_RS01560 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CLJU_RS01560 PF01565 FAD binding domain CLJU_RS01565 PF03668 P-loop ATPase protein family CLJU_RS01570 PF01933 Uncharacterised protein family UPF0052 CLJU_RS01575 PF10298 WhiA N-terminal LAGLIDADG-like domain CLJU_RS01575 PF02650 WhiA C-terminal HTH domain CLJU_RS01575 PF14527 WhiA LAGLIDADG-like domain CLJU_RS01585 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLJU_RS01585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLJU_RS01585 PF14579 Helix-hairpin-helix motif CLJU_RS01585 PF01336 OB-fold nucleic acid binding domain CLJU_RS01585 PF02811 PHP domain CLJU_RS01590 PF00365 Phosphofructokinase CLJU_RS01595 PF00224 Pyruvate kinase, barrel domain CLJU_RS01595 PF02887 Pyruvate kinase, alpha/beta domain CLJU_RS01600 PF01938 TRAM domain CLJU_RS01600 PF05958 tRNA (Uracil-5-)-methyltransferase CLJU_RS01615 PF02384 N-6 DNA Methylase CLJU_RS01615 PF12161 HsdM N-terminal domain CLJU_RS01625 PF12008 Type I restriction and modification enzyme - subunit R C terminal CLJU_RS01625 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CLJU_RS01625 PF18766 SWI2/SNF2 ATPase CLJU_RS01630 PF04545 Sigma-70, region 4 CLJU_RS01630 PF04542 Sigma-70 region 2 CLJU_RS01630 PF04539 Sigma-70 region 3 CLJU_RS01655 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLJU_RS01655 PF01612 3'-5' exonuclease CLJU_RS01655 PF00476 DNA polymerase family A CLJU_RS01655 PF01367 5'-3' exonuclease, C-terminal SAM fold CLJU_RS01660 PF10548 P22AR C-terminal domain CLJU_RS01660 PF02498 BRO family, N-terminal domain CLJU_RS01700 PF01555 DNA methylase CLJU_RS01725 PF03354 Phage Terminase CLJU_RS01735 PF00574 Clp protease CLJU_RS01825 PF08239 Bacterial SH3 domain CLJU_RS01825 PF01476 LysM domain CLJU_RS01825 PF00877 NlpC/P60 family CLJU_RS01835 PF00239 Resolvase, N terminal domain CLJU_RS01835 PF02796 Helix-turn-helix domain of resolvase CLJU_RS01840 PF00239 Resolvase, N terminal domain CLJU_RS01840 PF02796 Helix-turn-helix domain of resolvase CLJU_RS01860 PF00158 Sigma-54 interaction domain CLJU_RS01860 PF00072 Response regulator receiver domain CLJU_RS01860 PF02954 Bacterial regulatory protein, Fis family CLJU_RS01865 PF07005 Sugar-binding N-terminal domain CLJU_RS01865 PF17042 Nucleotide-binding C-terminal domain CLJU_RS01870 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS01875 PF00701 Dihydrodipicolinate synthetase family CLJU_RS01880 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CLJU_RS01885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLJU_RS01885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLJU_RS01885 PF01842 ACT domain CLJU_RS01890 PF07690 Major Facilitator Superfamily CLJU_RS01900 PF03698 Uncharacterised protein family (UPF0180) CLJU_RS01915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS01915 PF12729 Four helix bundle sensory module for signal transduction CLJU_RS01915 PF00672 HAMP domain CLJU_RS01925 PF00892 EamA-like transporter family CLJU_RS01930 PF00672 HAMP domain CLJU_RS01930 PF12729 Four helix bundle sensory module for signal transduction CLJU_RS01930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS01935 PF00535 Glycosyl transferase family 2 CLJU_RS01960 PF00563 EAL domain CLJU_RS01960 PF13185 GAF domain CLJU_RS01960 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS01975 PF00909 Ammonium Transporter Family CLJU_RS01980 PF00543 Nitrogen regulatory protein P-II CLJU_RS01985 PF01170 Putative RNA methylase family UPF0020 CLJU_RS01985 PF02926 THUMP domain CLJU_RS01995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLJU_RS02000 PF00873 AcrB/AcrD/AcrF family CLJU_RS02010 PF00271 Helicase conserved C-terminal domain CLJU_RS02010 PF03880 DbpA RNA binding domain CLJU_RS02010 PF00270 DEAD/DEAH box helicase CLJU_RS02015 PF13286 Phosphohydrolase-associated domain CLJU_RS02015 PF01966 HD domain CLJU_RS02025 PF01037 Lrp/AsnC ligand binding domain CLJU_RS02030 PF00390 Malic enzyme, N-terminal domain CLJU_RS02030 PF03949 Malic enzyme, NAD binding domain CLJU_RS02035 PF10415 Fumarase C C-terminus CLJU_RS02035 PF00206 Lyase CLJU_RS02040 PF00324 Amino acid permease CLJU_RS02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS02050 PF08281 Sigma-70, region 4 CLJU_RS02050 PF04542 Sigma-70 region 2 CLJU_RS02075 PF13419 Haloacid dehalogenase-like hydrolase CLJU_RS02100 PF00701 Dihydrodipicolinate synthetase family CLJU_RS02105 PF00375 Sodium:dicarboxylate symporter family CLJU_RS02115 PF04293 SpoVR like protein CLJU_RS02120 PF04285 Protein of unknown function (DUF444) CLJU_RS02125 PF06798 PrkA serine protein kinase C-terminal domain CLJU_RS02125 PF08298 PrkA AAA domain CLJU_RS02130 PF01047 MarR family CLJU_RS02135 PF07690 Major Facilitator Superfamily CLJU_RS02145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLJU_RS02145 PF00529 HlyD membrane-fusion protein of T1SS CLJU_RS02150 PF00117 Glutamine amidotransferase class-I CLJU_RS02150 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CLJU_RS02155 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLJU_RS02155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLJU_RS02155 PF02142 MGS-like domain CLJU_RS02160 PF01546 Peptidase family M20/M25/M40 CLJU_RS02160 PF07687 Peptidase dimerisation domain CLJU_RS02165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS02165 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS02170 PF00072 Response regulator receiver domain CLJU_RS02170 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS02175 PF00535 Glycosyl transferase family 2 CLJU_RS02180 PF04138 GtrA-like protein CLJU_RS02185 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase CLJU_RS02190 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CLJU_RS02190 PF01488 Shikimate / quinate 5-dehydrogenase CLJU_RS02190 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CLJU_RS02195 PF00202 Aminotransferase class-III CLJU_RS02205 PF00483 Nucleotidyl transferase CLJU_RS02225 PF00535 Glycosyl transferase family 2 CLJU_RS02225 PF13181 Tetratricopeptide repeat CLJU_RS02230 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS02230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS02240 PF00005 ABC transporter CLJU_RS02245 PF00072 Response regulator receiver domain CLJU_RS02245 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS02250 PF09383 NIL domain CLJU_RS02250 PF00005 ABC transporter CLJU_RS02255 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS02260 PF09861 Lactate racemase N-terminal domain CLJU_RS02265 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS02265 PF07702 UTRA domain CLJU_RS02275 PF00155 Aminotransferase class I and II CLJU_RS02280 PF01471 Putative peptidoglycan binding domain CLJU_RS02280 PF07486 Cell Wall Hydrolase CLJU_RS02290 PF07690 Major Facilitator Superfamily CLJU_RS02295 PF01047 MarR family CLJU_RS02325 PF13520 Amino acid permease CLJU_RS02330 PF13520 Amino acid permease CLJU_RS02335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS02335 PF00672 HAMP domain CLJU_RS02335 PF12729 Four helix bundle sensory module for signal transduction CLJU_RS02340 PF00989 PAS fold CLJU_RS02340 PF00672 HAMP domain CLJU_RS02340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS02340 PF18698 Histidine kinase sensor domain CLJU_RS02340 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS02345 PF01171 PP-loop family CLJU_RS02360 PF07486 Cell Wall Hydrolase CLJU_RS02380 PF00188 Cysteine-rich secretory protein family CLJU_RS02390 PF08367 Peptidase M16C associated CLJU_RS02390 PF00675 Insulinase (Peptidase family M16) CLJU_RS02390 PF05193 Peptidase M16 inactive domain CLJU_RS02395 PF12727 PBP superfamily domain CLJU_RS02395 PF12728 Helix-turn-helix domain CLJU_RS02400 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CLJU_RS02405 PF00543 Nitrogen regulatory protein P-II CLJU_RS02410 PF00543 Nitrogen regulatory protein P-II CLJU_RS02415 PF00148 Nitrogenase component 1 type Oxidoreductase CLJU_RS02420 PF00148 Nitrogenase component 1 type Oxidoreductase CLJU_RS02425 PF00148 Nitrogenase component 1 type Oxidoreductase CLJU_RS02430 PF04055 Radical SAM superfamily CLJU_RS02430 PF02579 Dinitrogenase iron-molybdenum cofactor CLJU_RS02440 PF00682 HMGL-like CLJU_RS02455 PF00072 Response regulator receiver domain CLJU_RS02455 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS02460 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS02460 PF13426 PAS domain CLJU_RS02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS02460 PF00672 HAMP domain CLJU_RS02470 PF00005 ABC transporter CLJU_RS02520 PF02706 Chain length determinant protein CLJU_RS02520 PF13807 G-rich domain on putative tyrosine kinase CLJU_RS02530 PF13614 AAA domain CLJU_RS02555 PF02397 Bacterial sugar transferase CLJU_RS02560 PF00534 Glycosyl transferases group 1 CLJU_RS02600 PF00534 Glycosyl transferases group 1 CLJU_RS02605 PF00535 Glycosyl transferase family 2 CLJU_RS02610 PF00483 Nucleotidyl transferase CLJU_RS02610 PF01050 Mannose-6-phosphate isomerase CLJU_RS02615 PF16363 GDP-mannose 4,6 dehydratase CLJU_RS02620 PF00483 Nucleotidyl transferase CLJU_RS02625 PF04321 RmlD substrate binding domain CLJU_RS02630 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CLJU_RS02640 PF00270 DEAD/DEAH box helicase CLJU_RS02640 PF17191 RecG wedge domain CLJU_RS02640 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CLJU_RS02645 PF13005 zinc-finger binding domain of transposase IS66 CLJU_RS02645 PF13007 Transposase C of IS166 homeodomain CLJU_RS02645 PF13817 IS66 C-terminal element CLJU_RS02645 PF03050 Transposase IS66 family CLJU_RS02660 PF02397 Bacterial sugar transferase CLJU_RS02670 PF13439 Glycosyltransferase Family 4 CLJU_RS02670 PF00534 Glycosyl transferases group 1 CLJU_RS02695 PF02719 Polysaccharide biosynthesis protein CLJU_RS02700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLJU_RS02705 PF02348 Cytidylyltransferase CLJU_RS02710 PF03102 NeuB family CLJU_RS02710 PF08666 SAF domain CLJU_RS02725 PF00483 Nucleotidyl transferase CLJU_RS02725 PF01050 Mannose-6-phosphate isomerase CLJU_RS02730 PF16363 GDP-mannose 4,6 dehydratase CLJU_RS02735 PF00483 Nucleotidyl transferase CLJU_RS02740 PF04321 RmlD substrate binding domain CLJU_RS02745 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CLJU_RS02750 PF03707 Bacterial signalling protein N terminal repeat CLJU_RS02750 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS02750 PF00563 EAL domain CLJU_RS02755 PF01478 Type IV leader peptidase family CLJU_RS02755 PF06750 Bacterial Peptidase A24 N-terminal domain CLJU_RS02760 PF02308 MgtC family CLJU_RS02770 PF16123 Hydroxyacylglutathione hydrolase C-terminus CLJU_RS02770 PF00753 Metallo-beta-lactamase superfamily CLJU_RS02780 PF00005 ABC transporter CLJU_RS02855 PF01497 Periplasmic binding protein CLJU_RS02860 PF01032 FecCD transport family CLJU_RS02865 PF00005 ABC transporter CLJU_RS02870 PF02659 Putative manganese efflux pump CLJU_RS02890 PF00027 Cyclic nucleotide-binding domain CLJU_RS02890 PF07885 Ion channel CLJU_RS02905 PF01565 FAD binding domain CLJU_RS02905 PF02913 FAD linked oxidases, C-terminal domain CLJU_RS02910 PF02615 Malate/L-lactate dehydrogenase CLJU_RS02920 PF01661 Macro domain CLJU_RS02925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLJU_RS02940 PF10502 Signal peptidase, peptidase S26 CLJU_RS02945 PF00696 Amino acid kinase family CLJU_RS02950 PF00171 Aldehyde dehydrogenase family CLJU_RS02955 PF02229 Transcriptional Coactivator p15 (PC4) CLJU_RS02960 PF05223 NTF2-like N-terminal transpeptidase domain CLJU_RS02960 PF03717 Penicillin-binding Protein dimerisation domain CLJU_RS02960 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS02965 PF00672 HAMP domain CLJU_RS02965 PF17202 Single cache domain 3 CLJU_RS02965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS02970 PF01471 Putative peptidoglycan binding domain CLJU_RS02970 PF17820 PDZ domain CLJU_RS02970 PF03572 Peptidase family S41 CLJU_RS02980 PF02659 Putative manganese efflux pump CLJU_RS02985 PF01475 Ferric uptake regulator family CLJU_RS02995 PF01966 HD domain CLJU_RS02995 PF11871 Domain of unknown function (DUF3391) CLJU_RS03000 PF01694 Rhomboid family CLJU_RS03005 PF00004 ATPase family associated with various cellular activities (AAA) CLJU_RS03005 PF17862 AAA+ lid domain CLJU_RS03005 PF01434 Peptidase family M41 CLJU_RS03020 PF01381 Helix-turn-helix CLJU_RS03030 PF10431 C-terminal, D2-small domain, of ClpB protein CLJU_RS03030 PF17871 AAA lid domain CLJU_RS03030 PF07724 AAA domain (Cdc48 subfamily) CLJU_RS03030 PF00004 ATPase family associated with various cellular activities (AAA) CLJU_RS03030 PF02861 Clp amino terminal domain, pathogenicity island component CLJU_RS03035 PF01522 Polysaccharide deacetylase CLJU_RS03040 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLJU_RS03050 PF01293 Phosphoenolpyruvate carboxykinase CLJU_RS03055 PF02673 Bacitracin resistance protein BacA CLJU_RS03080 PF01546 Peptidase family M20/M25/M40 CLJU_RS03080 PF07687 Peptidase dimerisation domain CLJU_RS03085 PF09383 NIL domain CLJU_RS03085 PF00005 ABC transporter CLJU_RS03090 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS03095 PF03180 NLPA lipoprotein CLJU_RS03110 PF00892 EamA-like transporter family CLJU_RS03115 PF00809 Pterin binding enzyme CLJU_RS03120 PF01227 GTP cyclohydrolase I CLJU_RS03125 PF01966 HD domain CLJU_RS03130 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CLJU_RS03130 PF02152 Dihydroneopterin aldolase CLJU_RS03135 PF07728 AAA domain (dynein-related subfamily) CLJU_RS03155 PF05762 VWA domain containing CoxE-like protein CLJU_RS03190 PF00005 ABC transporter CLJU_RS03195 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS03200 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS03200 PF00072 Response regulator receiver domain CLJU_RS03235 PF00892 EamA-like transporter family CLJU_RS03240 PF00753 Metallo-beta-lactamase superfamily CLJU_RS03240 PF13567 Domain of unknown function (DUF4131) CLJU_RS03240 PF03772 Competence protein CLJU_RS03245 PF01553 Acyltransferase CLJU_RS03250 PF00682 HMGL-like CLJU_RS03255 PF00330 Aconitase family (aconitate hydratase) CLJU_RS03260 PF00180 Isocitrate/isopropylmalate dehydrogenase CLJU_RS03260 PF18324 Hypothetical protein TT1725 CLJU_RS03265 PF01053 Cys/Met metabolism PLP-dependent enzyme CLJU_RS03270 PF00809 Pterin binding enzyme CLJU_RS03270 PF02965 Vitamin B12 dependent methionine synthase, activation domain CLJU_RS03270 PF02310 B12 binding domain CLJU_RS03270 PF02607 B12 binding domain CLJU_RS03270 PF02574 Homocysteine S-methyltransferase CLJU_RS03280 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLJU_RS03285 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS03290 PF00005 ABC transporter CLJU_RS03295 PF00764 Arginosuccinate synthase CLJU_RS03300 PF00206 Lyase CLJU_RS03300 PF14698 Argininosuccinate lyase C-terminal CLJU_RS03305 PF04070 Domain of unknown function (DUF378) CLJU_RS03310 PF01037 Lrp/AsnC ligand binding domain CLJU_RS03310 PF13404 AsnC-type helix-turn-helix domain CLJU_RS03315 PF01336 OB-fold nucleic acid binding domain CLJU_RS03315 PF00152 tRNA synthetases class II (D, K and N) CLJU_RS03325 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS03325 PF07702 UTRA domain CLJU_RS03330 PF13478 XdhC Rossmann domain CLJU_RS03330 PF02625 XdhC and CoxI family CLJU_RS03360 PF13439 Glycosyltransferase Family 4 CLJU_RS03360 PF00534 Glycosyl transferases group 1 CLJU_RS03365 PF08471 Class II vitamin B12-dependent ribonucleotide reductase CLJU_RS03365 PF02867 Ribonucleotide reductase, barrel domain CLJU_RS03375 PF01476 LysM domain CLJU_RS03375 PF00246 Zinc carboxypeptidase CLJU_RS03385 PF00689 Cation transporting ATPase, C-terminus CLJU_RS03385 PF00690 Cation transporter/ATPase, N-terminus CLJU_RS03400 PF00795 Carbon-nitrogen hydrolase CLJU_RS03400 PF02540 NAD synthase CLJU_RS03410 PF01145 SPFH domain / Band 7 family CLJU_RS03410 PF16200 C-terminal region of band_7 CLJU_RS03415 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS03415 PF00072 Response regulator receiver domain CLJU_RS03420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS03420 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS03420 PF00989 PAS fold CLJU_RS03420 PF16736 Single Cache-like CLJU_RS03430 PF12705 PD-(D/E)XK nuclease superfamily CLJU_RS03435 PF00384 Molybdopterin oxidoreductase CLJU_RS03435 PF01568 Molydopterin dinucleotide binding domain CLJU_RS03435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLJU_RS03440 PF01568 Molydopterin dinucleotide binding domain CLJU_RS03440 PF00384 Molybdopterin oxidoreductase CLJU_RS03440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLJU_RS03445 PF00994 Probable molybdopterin binding domain CLJU_RS03445 PF03453 MoeA N-terminal region (domain I and II) CLJU_RS03445 PF03454 MoeA C-terminal region (domain IV) CLJU_RS03455 PF02634 FdhD/NarQ family CLJU_RS03465 PF00037 4Fe-4S binding domain CLJU_RS03465 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLJU_RS03465 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLJU_RS03475 PF13247 4Fe-4S dicluster domain CLJU_RS03475 PF12800 4Fe-4S binding domain CLJU_RS03480 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLJU_RS03480 PF00037 4Fe-4S binding domain CLJU_RS03480 PF02256 Iron hydrogenase small subunit CLJU_RS03480 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLJU_RS03485 PF12800 4Fe-4S binding domain CLJU_RS03485 PF13247 4Fe-4S dicluster domain CLJU_RS03490 PF13426 PAS domain CLJU_RS03490 PF02954 Bacterial regulatory protein, Fis family CLJU_RS03490 PF00158 Sigma-54 interaction domain CLJU_RS03495 PF03319 Ethanolamine utilisation protein EutN/carboxysome CLJU_RS03500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS03505 PF13520 Amino acid permease CLJU_RS03520 PF01842 ACT domain CLJU_RS03520 PF00742 Homoserine dehydrogenase CLJU_RS03520 PF03447 Homoserine dehydrogenase, NAD binding domain CLJU_RS03525 PF00288 GHMP kinases N terminal domain CLJU_RS03545 PF02545 Maf-like protein CLJU_RS03550 PF04002 RadC-like JAB domain CLJU_RS03570 PF03717 Penicillin-binding Protein dimerisation domain CLJU_RS03570 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS03575 PF03775 Septum formation inhibitor MinC, C-terminal domain CLJU_RS03580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLJU_RS03585 PF03776 Septum formation topological specificity factor MinE CLJU_RS03590 PF01098 Cell cycle protein CLJU_RS03595 PF02142 MGS-like domain CLJU_RS03605 PF02163 Peptidase family M50 CLJU_RS03620 PF10150 Ribonuclease E/G family CLJU_RS03625 PF00829 Ribosomal prokaryotic L21 protein CLJU_RS03635 PF01016 Ribosomal L27 protein CLJU_RS03640 PF01926 50S ribosome-binding GTPase CLJU_RS03640 PF01018 GTP1/OBG CLJU_RS03640 PF09269 Domain of unknown function (DUF1967) CLJU_RS03645 PF01467 Cytidylyltransferase-like CLJU_RS03650 PF01966 HD domain CLJU_RS03655 PF01042 Endoribonuclease L-PSP CLJU_RS03660 PF00849 RNA pseudouridylate synthase CLJU_RS03660 PF01479 S4 domain CLJU_RS03665 PF00768 D-alanyl-D-alanine carboxypeptidase CLJU_RS03665 PF07943 Penicillin-binding protein 5, C-terminal domain CLJU_RS03675 PF00586 AIR synthase related protein, N-terminal domain CLJU_RS03675 PF02769 AIR synthase related protein, C-terminal domain CLJU_RS03680 PF03841 L-seryl-tRNA selenium transferase CLJU_RS03680 PF12390 Selenocysteine synthase N terminal CLJU_RS03685 PF00009 Elongation factor Tu GTP binding domain CLJU_RS03685 PF03144 Elongation factor Tu domain 2 CLJU_RS03685 PF09105 Elongation factor SelB, winged helix CLJU_RS03685 PF09106 Elongation factor SelB, winged helix CLJU_RS03685 PF09107 Elongation factor SelB, winged helix CLJU_RS03700 PF02310 B12 binding domain CLJU_RS03700 PF02607 B12 binding domain CLJU_RS03710 PF00175 Oxidoreductase NAD-binding domain CLJU_RS03710 PF00111 2Fe-2S iron-sulfur cluster binding domain CLJU_RS03725 PF02310 B12 binding domain CLJU_RS03725 PF02607 B12 binding domain CLJU_RS03740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLJU_RS03745 PF00873 AcrB/AcrD/AcrF family CLJU_RS03755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLJU_RS03755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CLJU_RS03780 PF00005 ABC transporter CLJU_RS03790 PF00072 Response regulator receiver domain CLJU_RS03790 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS03795 PF00672 HAMP domain CLJU_RS03795 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS03795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS03805 PF03063 Prismane/CO dehydrogenase family CLJU_RS03810 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS03810 PF00072 Response regulator receiver domain CLJU_RS03815 PF00005 ABC transporter CLJU_RS03825 PF00005 ABC transporter CLJU_RS03835 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS03845 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS03845 PF00072 Response regulator receiver domain CLJU_RS03855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS03855 PF00672 HAMP domain CLJU_RS03855 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS03865 PF01925 Sulfite exporter TauE/SafE CLJU_RS03870 PF00689 Cation transporting ATPase, C-terminus CLJU_RS03870 PF00690 Cation transporter/ATPase, N-terminus CLJU_RS03880 PF06144 DNA polymerase III, delta subunit CLJU_RS03885 PF01649 Ribosomal protein S20 CLJU_RS03890 PF03418 Germination protease CLJU_RS03905 PF03144 Elongation factor Tu domain 2 CLJU_RS03905 PF06421 GTP-binding protein LepA C-terminus CLJU_RS03905 PF00009 Elongation factor Tu GTP binding domain CLJU_RS03905 PF00679 Elongation factor G C-terminus CLJU_RS03910 PF04055 Radical SAM superfamily CLJU_RS03910 PF06969 HemN C-terminal domain CLJU_RS03915 PF01628 HrcA protein C terminal domain CLJU_RS03920 PF01025 GrpE CLJU_RS03925 PF00012 Hsp70 protein CLJU_RS03930 PF00684 DnaJ central domain CLJU_RS03930 PF01556 DnaJ C terminal domain CLJU_RS03930 PF00226 DnaJ domain CLJU_RS03940 PF04452 RNA methyltransferase CLJU_RS03945 PF00919 Uncharacterized protein family UPF0004 CLJU_RS03945 PF01938 TRAM domain CLJU_RS03945 PF04055 Radical SAM superfamily CLJU_RS03950 PF01230 HIT domain CLJU_RS03955 PF01165 Ribosomal protein S21 CLJU_RS03965 PF07873 YabP family CLJU_RS03975 PF07698 7TM receptor with intracellular HD hydrolase CLJU_RS03975 PF07697 7TM-HD extracellular CLJU_RS03975 PF01966 HD domain CLJU_RS03980 PF02130 Uncharacterized protein family UPF0054 CLJU_RS03985 PF01219 Prokaryotic diacylglycerol kinase CLJU_RS03990 PF01926 50S ribosome-binding GTPase CLJU_RS03990 PF07650 KH domain CLJU_RS03995 PF02565 Recombination protein O C terminal CLJU_RS03995 PF11967 Recombination protein O N terminal CLJU_RS04005 PF00571 CBS domain CLJU_RS04005 PF08279 HTH domain CLJU_RS04010 PF00391 PEP-utilising enzyme, mobile domain CLJU_RS04010 PF02896 PEP-utilising enzyme, TIM barrel domain CLJU_RS04010 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CLJU_RS04020 PF07690 Major Facilitator Superfamily CLJU_RS04025 PF00857 Isochorismatase family CLJU_RS04030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS04030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLJU_RS04045 PF01807 CHC2 zinc finger CLJU_RS04045 PF08275 DNA primase catalytic core, N-terminal domain CLJU_RS04045 PF10410 DnaB-helicase binding domain of primase CLJU_RS04050 PF04539 Sigma-70 region 3 CLJU_RS04050 PF04542 Sigma-70 region 2 CLJU_RS04050 PF04545 Sigma-70, region 4 CLJU_RS04050 PF00140 Sigma-70 factor, region 1.2 CLJU_RS04050 PF03979 Sigma-70 factor, region 1.1 CLJU_RS04055 PF10882 Bacterial PH domain CLJU_RS04060 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CLJU_RS04065 PF01784 NIF3 (NGG1p interacting factor 3) CLJU_RS04080 PF01925 Sulfite exporter TauE/SafE CLJU_RS04100 PF00324 Amino acid permease CLJU_RS04120 PF03306 Alpha-acetolactate decarboxylase CLJU_RS04125 PF12848 ABC transporter CLJU_RS04125 PF16326 ABC transporter C-terminal domain CLJU_RS04125 PF00005 ABC transporter CLJU_RS04135 PF01790 Prolipoprotein diacylglyceryl transferase CLJU_RS04145 PF13180 PDZ domain CLJU_RS04155 PF01554 MatE CLJU_RS04170 PF00860 Permease family CLJU_RS04175 PF03323 Bacillus/Clostridium GerA spore germination protein CLJU_RS04190 PF03845 Spore germination protein CLJU_RS04205 PF00731 AIR carboxylase CLJU_RS04210 PF01259 SAICAR synthetase CLJU_RS04215 PF00156 Phosphoribosyl transferase domain CLJU_RS04220 PF00586 AIR synthase related protein, N-terminal domain CLJU_RS04220 PF02769 AIR synthase related protein, C-terminal domain CLJU_RS04225 PF00551 Formyl transferase CLJU_RS04230 PF01808 AICARFT/IMPCHase bienzyme CLJU_RS04230 PF02142 MGS-like domain CLJU_RS04235 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLJU_RS04235 PF02843 Phosphoribosylglycinamide synthetase, C domain CLJU_RS04235 PF02844 Phosphoribosylglycinamide synthetase, N domain CLJU_RS04240 PF09992 Phosphodiester glycosidase CLJU_RS04240 PF12708 Pectate lyase superfamily protein CLJU_RS04250 PF00753 Metallo-beta-lactamase superfamily CLJU_RS04250 PF16123 Hydroxyacylglutathione hydrolase C-terminus CLJU_RS04275 PF00890 FAD binding domain CLJU_RS04275 PF14537 Cytochrome c3 CLJU_RS04285 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS04285 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLJU_RS04285 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLJU_RS04305 PF13520 Amino acid permease CLJU_RS04310 PF01063 Amino-transferase class IV CLJU_RS04315 PF05958 tRNA (Uracil-5-)-methyltransferase CLJU_RS04325 PF00884 Sulfatase CLJU_RS04330 PF01026 TatD related DNase CLJU_RS04335 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS04340 PF09084 NMT1/THI5 like CLJU_RS04345 PF00005 ABC transporter CLJU_RS04355 PF00072 Response regulator receiver domain CLJU_RS04355 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS04360 PF00144 Beta-lactamase CLJU_RS04365 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS04365 PF00155 Aminotransferase class I and II CLJU_RS04385 PF13091 PLD-like domain CLJU_RS04395 PF00005 ABC transporter CLJU_RS04395 PF00664 ABC transporter transmembrane region CLJU_RS04400 PF00005 ABC transporter CLJU_RS04400 PF00664 ABC transporter transmembrane region CLJU_RS04405 PF00384 Molybdopterin oxidoreductase CLJU_RS04405 PF01568 Molydopterin dinucleotide binding domain CLJU_RS04405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLJU_RS04410 PF13407 Periplasmic binding protein domain CLJU_RS04420 PF00999 Sodium/hydrogen exchanger family CLJU_RS04440 PF06207 Protein of unknown function (DUF1002) CLJU_RS04445 PF01784 NIF3 (NGG1p interacting factor 3) CLJU_RS04460 PF08502 LeuA allosteric (dimerisation) domain CLJU_RS04460 PF00682 HMGL-like CLJU_RS04465 PF00330 Aconitase family (aconitate hydratase) CLJU_RS04470 PF00694 Aconitase C-terminal domain CLJU_RS04475 PF00180 Isocitrate/isopropylmalate dehydrogenase CLJU_RS04480 PF18267 Rubredoxin NAD+ reductase C-terminal domain CLJU_RS04480 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS04480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLJU_RS04480 PF04324 BFD-like [2Fe-2S] binding domain CLJU_RS04490 PF03063 Prismane/CO dehydrogenase family CLJU_RS04495 PF00270 DEAD/DEAH box helicase CLJU_RS04495 PF00271 Helicase conserved C-terminal domain CLJU_RS04500 PF01544 CorA-like Mg2+ transporter protein CLJU_RS04505 PF00005 ABC transporter CLJU_RS04520 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS04520 PF00072 Response regulator receiver domain CLJU_RS04525 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS04525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS04530 PF01751 Toprim domain CLJU_RS04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS04530 PF00986 DNA gyrase B subunit, carboxyl terminus CLJU_RS04530 PF00204 DNA gyrase B CLJU_RS04535 PF03989 DNA gyrase C-terminal domain, beta-propeller CLJU_RS04535 PF00521 DNA gyrase/topoisomerase IV, subunit A CLJU_RS04540 PF03099 Biotin/lipoate A/B protein ligase family CLJU_RS04540 PF10437 Bacterial lipoate protein ligase C-terminus CLJU_RS04545 PF01965 DJ-1/PfpI family CLJU_RS04550 PF05193 Peptidase M16 inactive domain CLJU_RS04550 PF00675 Insulinase (Peptidase family M16) CLJU_RS04555 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CLJU_RS04555 PF17768 RecJ OB domain CLJU_RS04555 PF02272 DHHA1 domain CLJU_RS04555 PF01368 DHH family CLJU_RS04560 PF01316 Arginine repressor, DNA binding domain CLJU_RS04560 PF02863 Arginine repressor, C-terminal domain CLJU_RS04565 PF13520 Amino acid permease CLJU_RS04575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLJU_RS04575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLJU_RS04580 PF13520 Amino acid permease CLJU_RS04585 PF00696 Amino acid kinase family CLJU_RS04590 PF02743 Cache domain CLJU_RS04590 PF00672 HAMP domain CLJU_RS04590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS04595 PF11495 Archaeal transcriptional regulator TrmB CLJU_RS04595 PF01978 Sugar-specific transcriptional regulator TrmB CLJU_RS04600 PF03033 Glycosyltransferase family 28 N-terminal domain CLJU_RS04600 PF04101 Glycosyltransferase family 28 C-terminal domain CLJU_RS04605 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLJU_RS04605 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLJU_RS04605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLJU_RS04605 PF10371 Domain of unknown function CLJU_RS04605 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLJU_RS04620 PF01063 Amino-transferase class IV CLJU_RS04630 PF01584 CheW-like domain CLJU_RS04635 PF03975 CheD chemotactic sensory transduction CLJU_RS04640 PF00072 Response regulator receiver domain CLJU_RS04640 PF01339 CheB methylesterase CLJU_RS04645 PF01739 CheR methyltransferase, SAM binding domain CLJU_RS04645 PF03705 CheR methyltransferase, all-alpha domain CLJU_RS04650 PF01584 CheW-like domain CLJU_RS04650 PF01627 Hpt domain CLJU_RS04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS04650 PF07194 P2 response regulator binding domain CLJU_RS04650 PF02895 Signal transducing histidine kinase, homodimeric domain CLJU_RS04655 PF04509 CheC-like family CLJU_RS04660 PF00072 Response regulator receiver domain CLJU_RS04665 PF01584 CheW-like domain CLJU_RS04670 PF02154 Flagellar motor switch protein FliM CLJU_RS04670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CLJU_RS04675 PF04509 CheC-like family CLJU_RS04675 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CLJU_RS04690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLJU_RS04690 PF00460 Flagella basal body rod protein CLJU_RS04700 PF02623 FliW protein CLJU_RS04705 PF02599 Global regulator protein family CLJU_RS04710 PF03646 FlaG protein CLJU_RS04720 PF02561 Flagellar protein FliS CLJU_RS04735 PF00700 Bacterial flagellin C-terminal helical region CLJU_RS04735 PF00669 Bacterial flagellin N-terminal helical region CLJU_RS04740 PF07196 Flagellin hook IN motif CLJU_RS04740 PF07195 Flagellar hook-associated protein 2 C-terminus CLJU_RS04740 PF02465 Flagellar hook-associated protein 2 N-terminus CLJU_RS04750 PF00700 Bacterial flagellin C-terminal helical region CLJU_RS04750 PF00669 Bacterial flagellin N-terminal helical region CLJU_RS04755 PF00535 Glycosyl transferase family 2 CLJU_RS04780 PF02599 Global regulator protein family CLJU_RS04790 PF00669 Bacterial flagellin N-terminal helical region CLJU_RS04790 PF00700 Bacterial flagellin C-terminal helical region CLJU_RS04795 PF00535 Glycosyl transferase family 2 CLJU_RS04800 PF00535 Glycosyl transferase family 2 CLJU_RS04815 PF03050 Transposase IS66 family CLJU_RS04815 PF13817 IS66 C-terminal element CLJU_RS04815 PF13005 zinc-finger binding domain of transposase IS66 CLJU_RS04815 PF13007 Transposase C of IS166 homeodomain CLJU_RS04820 PF02899 Phage integrase, N-terminal SAM-like domain CLJU_RS04820 PF00589 Phage integrase family CLJU_RS04825 PF00589 Phage integrase family CLJU_RS04825 PF02899 Phage integrase, N-terminal SAM-like domain CLJU_RS04870 PF08780 Nucleotidyltransferase substrate binding protein like CLJU_RS04880 PF00535 Glycosyl transferase family 2 CLJU_RS04880 PF13181 Tetratricopeptide repeat CLJU_RS04905 PF16363 GDP-mannose 4,6 dehydratase CLJU_RS04935 PF04122 Putative cell wall binding repeat 2 CLJU_RS04935 PF01520 N-acetylmuramoyl-L-alanine amidase CLJU_RS04950 PF03447 Homoserine dehydrogenase, NAD binding domain CLJU_RS04950 PF00742 Homoserine dehydrogenase CLJU_RS04950 PF01842 ACT domain CLJU_RS04955 PF04284 Protein of unknown function (DUF441) CLJU_RS04975 PF00692 dUTPase CLJU_RS04980 PF00436 Single-strand binding protein family CLJU_RS04985 PF02743 Cache domain CLJU_RS04985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS04985 PF00672 HAMP domain CLJU_RS04995 PF00700 Bacterial flagellin C-terminal helical region CLJU_RS04995 PF00669 Bacterial flagellin N-terminal helical region CLJU_RS05005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLJU_RS05005 PF00460 Flagella basal body rod protein CLJU_RS05010 PF02049 Flagellar hook-basal body complex protein FliE CLJU_RS05015 PF01514 Secretory protein of YscJ/FliF family CLJU_RS05015 PF08345 Flagellar M-ring protein C-terminal CLJU_RS05020 PF14841 FliG middle domain CLJU_RS05020 PF14842 FliG N-terminal domain CLJU_RS05020 PF01706 FliG C-terminal domain CLJU_RS05030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLJU_RS05030 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLJU_RS05030 PF18269 T3SS EscN ATPase C-terminal domain CLJU_RS05045 PF03963 Flagellar hook capping protein - N-terminal region CLJU_RS05055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLJU_RS05055 PF00460 Flagella basal body rod protein CLJU_RS05060 PF06289 Flagellar and Swarming motility proteins CLJU_RS05065 PF03748 Flagellar basal body-associated protein FliL CLJU_RS05075 PF00813 FliP family CLJU_RS05080 PF01313 Bacterial export proteins, family 3 CLJU_RS05085 PF01312 FlhB HrpN YscU SpaS Family CLJU_RS05090 PF00771 FHIPEP family CLJU_RS05095 PF00448 SRP54-type protein, GTPase domain CLJU_RS05100 PF10609 NUBPL iron-transfer P-loop NTPase CLJU_RS05110 PF04539 Sigma-70 region 3 CLJU_RS05110 PF04545 Sigma-70, region 4 CLJU_RS05110 PF04542 Sigma-70 region 2 CLJU_RS05120 PF00460 Flagella basal body rod protein CLJU_RS05120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLJU_RS05125 PF00460 Flagella basal body rod protein CLJU_RS05125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLJU_RS05135 PF00571 CBS domain CLJU_RS05135 PF01368 DHH family CLJU_RS05135 PF02833 DHHA2 domain CLJU_RS05135 PF07085 DRTGG domain CLJU_RS05140 PF00690 Cation transporter/ATPase, N-terminus CLJU_RS05140 PF00689 Cation transporting ATPase, C-terminus CLJU_RS05150 PF05362 Lon protease (S16) C-terminal proteolytic domain CLJU_RS05150 PF13654 AAA domain CLJU_RS05160 PF00440 Bacterial regulatory proteins, tetR family CLJU_RS05160 PF17925 Tetracyclin repressor-like, C-terminal domain CLJU_RS05165 PF01926 50S ribosome-binding GTPase CLJU_RS05165 PF06071 Protein of unknown function (DUF933) CLJU_RS05170 PF02381 MraZ protein, putative antitoxin-like CLJU_RS05175 PF01795 MraW methylase family CLJU_RS05185 PF03717 Penicillin-binding Protein dimerisation domain CLJU_RS05185 PF03793 PASTA domain CLJU_RS05185 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS05190 PF01225 Mur ligase family, catalytic domain CLJU_RS05190 PF08245 Mur ligase middle domain CLJU_RS05190 PF02875 Mur ligase family, glutamate ligase domain CLJU_RS05195 PF08245 Mur ligase middle domain CLJU_RS05195 PF02875 Mur ligase family, glutamate ligase domain CLJU_RS05195 PF01225 Mur ligase family, catalytic domain CLJU_RS05200 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CLJU_RS05200 PF00953 Glycosyl transferase family 4 CLJU_RS05205 PF01098 Cell cycle protein CLJU_RS05210 PF08478 POTRA domain, FtsQ-type CLJU_RS05215 PF05949 Bacterial protein of unknown function (DUF881) CLJU_RS05220 PF06947 Protein of unknown function (DUF1290) CLJU_RS05230 PF01168 Alanine racemase, N-terminal domain CLJU_RS05235 PF04472 Cell division protein SepF CLJU_RS05245 PF17774 Putative RNA-binding domain in YlmH CLJU_RS05245 PF01479 S4 domain CLJU_RS05250 PF05103 DivIVA protein CLJU_RS05255 PF01048 Phosphorylase superfamily CLJU_RS05260 PF01252 Signal peptidase (SPase) II CLJU_RS05265 PF01479 S4 domain CLJU_RS05265 PF00849 RNA pseudouridylate synthase CLJU_RS05270 PF00860 Permease family CLJU_RS05275 PF00156 Phosphoribosyl transferase domain CLJU_RS05280 PF05670 NFACT protein RNA binding domain CLJU_RS05285 PF01678 Diaminopimelate epimerase CLJU_RS05315 PF13847 Methyltransferase domain CLJU_RS05330 PF17203 Single cache domain 3 CLJU_RS05330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS05330 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLJU_RS05340 PF00437 Type II/IV secretion system protein CLJU_RS05350 PF00114 Pilin (bacterial filament) CLJU_RS05350 PF07963 Prokaryotic N-terminal methylation motif CLJU_RS05390 PF00557 Metallopeptidase family M24 CLJU_RS05390 PF01321 Creatinase/Prolidase N-terminal domain CLJU_RS05395 PF01132 Elongation factor P (EF-P) OB domain CLJU_RS05395 PF09285 Elongation factor P, C-terminal CLJU_RS05395 PF08207 Elongation factor P (EF-P) KOW-like domain CLJU_RS05410 PF09548 Stage III sporulation protein AB (spore_III_AB) CLJU_RS05420 PF06686 Stage III sporulation protein AC/AD protein family CLJU_RS05445 PF03780 Asp23 family, cell envelope-related function CLJU_RS05450 PF01029 NusB family CLJU_RS05455 PF13742 OB-fold nucleic acid binding domain CLJU_RS05455 PF02601 Exonuclease VII, large subunit CLJU_RS05460 PF02609 Exonuclease VII small subunit CLJU_RS05465 PF00348 Polyprenyl synthetase CLJU_RS05470 PF02780 Transketolase, C-terminal domain CLJU_RS05470 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CLJU_RS05470 PF02779 Transketolase, pyrimidine binding domain CLJU_RS05475 PF01479 S4 domain CLJU_RS05475 PF01728 FtsJ-like methyltransferase CLJU_RS05480 PF01513 ATP-NAD kinase CLJU_RS05485 PF02863 Arginine repressor, C-terminal domain CLJU_RS05485 PF01316 Arginine repressor, DNA binding domain CLJU_RS05490 PF13476 AAA domain CLJU_RS05495 PF17820 PDZ domain CLJU_RS05495 PF05580 SpoIVB peptidase S55 CLJU_RS05500 PF00072 Response regulator receiver domain CLJU_RS05500 PF08769 Sporulation initiation factor Spo0A C terminal CLJU_RS05505 PF00293 NUDIX domain CLJU_RS05520 PF00589 Phage integrase family CLJU_RS05520 PF02899 Phage integrase, N-terminal SAM-like domain CLJU_RS05525 PF00768 D-alanyl-D-alanine carboxypeptidase CLJU_RS05525 PF07943 Penicillin-binding protein 5, C-terminal domain CLJU_RS05530 PF00571 CBS domain CLJU_RS05530 PF01743 Poly A polymerase head domain CLJU_RS05530 PF12627 Probable RNA and SrmB- binding site of polymerase A CLJU_RS05530 PF02272 DHHA1 domain CLJU_RS05530 PF01368 DHH family CLJU_RS05535 PF02616 Segregation and condensation protein ScpA CLJU_RS05540 PF04079 Segregation and condensation complex subunit ScpB CLJU_RS05545 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CLJU_RS05555 PF07943 Penicillin-binding protein 5, C-terminal domain CLJU_RS05555 PF00768 D-alanyl-D-alanine carboxypeptidase CLJU_RS05570 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLJU_RS05570 PF13375 RnfC Barrel sandwich hybrid domain CLJU_RS05570 PF10531 SLBB domain CLJU_RS05570 PF13237 4Fe-4S dicluster domain CLJU_RS05575 PF03116 NQR2, RnfD, RnfE family CLJU_RS05580 PF04205 FMN-binding domain CLJU_RS05585 PF02508 Rnf-Nqr subunit, membrane protein CLJU_RS05590 PF02508 Rnf-Nqr subunit, membrane protein CLJU_RS05595 PF04060 Putative Fe-S cluster CLJU_RS05595 PF13187 4Fe-4S dicluster domain CLJU_RS05625 PF02583 Metal-sensitive transcriptional repressor CLJU_RS05635 PF06738 Putative threonine/serine exporter CLJU_RS05640 PF00464 Serine hydroxymethyltransferase CLJU_RS05650 PF13411 MerR HTH family regulatory protein CLJU_RS05660 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CLJU_RS05660 PF02769 AIR synthase related protein, C-terminal domain CLJU_RS05660 PF00586 AIR synthase related protein, N-terminal domain CLJU_RS05665 PF01418 Helix-turn-helix domain, rpiR family CLJU_RS05665 PF01380 SIS domain CLJU_RS05670 PF00107 Zinc-binding dehydrogenase CLJU_RS05670 PF08240 Alcohol dehydrogenase GroES-like domain CLJU_RS05675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLJU_RS05675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLJU_RS05680 PF01842 ACT domain CLJU_RS05680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLJU_RS05680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLJU_RS05685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CLJU_RS05685 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CLJU_RS05690 PF02447 GntP family permease CLJU_RS05695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLJU_RS05695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLJU_RS05700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLJU_RS05700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLJU_RS05705 PF01081 KDPG and KHG aldolase CLJU_RS05710 PF03480 Bacterial extracellular solute-binding protein, family 7 CLJU_RS05715 PF02645 Uncharacterised protein, DegV family COG1307 CLJU_RS05720 PF13393 Histidyl-tRNA synthetase CLJU_RS05725 PF01634 ATP phosphoribosyltransferase CLJU_RS05730 PF00815 Histidinol dehydrogenase CLJU_RS05735 PF00475 Imidazoleglycerol-phosphate dehydratase CLJU_RS05740 PF00117 Glutamine amidotransferase class-I CLJU_RS05745 PF00977 Histidine biosynthesis protein CLJU_RS05750 PF00155 Aminotransferase class I and II CLJU_RS05755 PF00977 Histidine biosynthesis protein CLJU_RS05760 PF01502 Phosphoribosyl-AMP cyclohydrolase CLJU_RS05765 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CLJU_RS05775 PF00072 Response regulator receiver domain CLJU_RS05775 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS05780 PF13426 PAS domain CLJU_RS05780 PF00672 HAMP domain CLJU_RS05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS05780 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS05805 PF02901 Pyruvate formate lyase-like CLJU_RS05805 PF01228 Glycine radical CLJU_RS05810 PF04055 Radical SAM superfamily CLJU_RS05815 PF00072 Response regulator receiver domain CLJU_RS05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS05820 PF02743 Cache domain CLJU_RS05820 PF00672 HAMP domain CLJU_RS05820 PF06580 Histidine kinase CLJU_RS05825 PF00936 BMC domain CLJU_RS05830 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS05835 PF00230 Major intrinsic protein CLJU_RS05855 PF03319 Ethanolamine utilisation protein EutN/carboxysome CLJU_RS05865 PF00936 BMC domain CLJU_RS05870 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS05870 PF00171 Aldehyde dehydrogenase family CLJU_RS05875 PF06130 Phosphate propanoyltransferase CLJU_RS05880 PF00936 BMC domain CLJU_RS05885 PF00936 BMC domain CLJU_RS05890 PF05496 Holliday junction DNA helicase RuvB P-loop domain CLJU_RS05890 PF12002 MgsA AAA+ ATPase C terminal CLJU_RS05890 PF16193 AAA C-terminal domain CLJU_RS05895 PF00842 Alanine racemase, C-terminal domain CLJU_RS05895 PF01168 Alanine racemase, N-terminal domain CLJU_RS05905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLJU_RS05910 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS05915 PF12911 N-terminal TM domain of oligopeptide transport permease C CLJU_RS05915 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS05920 PF00005 ABC transporter CLJU_RS05920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLJU_RS05925 PF00005 ABC transporter CLJU_RS05925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLJU_RS05930 PF01244 Membrane dipeptidase (Peptidase family M19) CLJU_RS05935 PF02082 Transcriptional regulator CLJU_RS05940 PF00266 Aminotransferase class-V CLJU_RS05945 PF01592 NifU-like N terminal domain CLJU_RS05955 PF01594 AI-2E family transporter CLJU_RS05960 PF02272 DHHA1 domain CLJU_RS05960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLJU_RS05960 PF01411 tRNA synthetases class II (A) CLJU_RS05965 PF06135 IreB regulatory phosphoprotein CLJU_RS05970 PF03652 Holliday junction resolvase CLJU_RS05975 PF06949 Protein of unknown function (DUF1292) CLJU_RS05980 PF01475 Ferric uptake regulator family CLJU_RS05985 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CLJU_RS05985 PF00753 Metallo-beta-lactamase superfamily CLJU_RS05985 PF17770 Ribonuclease J C-terminal domain CLJU_RS05990 PF06133 Control of competence regulator ComK, YlbF/YmcA CLJU_RS05995 PF00679 Elongation factor G C-terminus CLJU_RS05995 PF14492 Elongation Factor G, domain II CLJU_RS05995 PF00009 Elongation factor Tu GTP binding domain CLJU_RS05995 PF03144 Elongation factor Tu domain 2 CLJU_RS06000 PF01596 O-methyltransferase CLJU_RS06005 PF16325 Peptidase family U32 C-terminal domain CLJU_RS06005 PF01136 Peptidase family U32 CLJU_RS06010 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS06015 PF04545 Sigma-70, region 4 CLJU_RS06015 PF04542 Sigma-70 region 2 CLJU_RS06020 PF00437 Type II/IV secretion system protein CLJU_RS06030 PF02491 SHS2 domain inserted in FTSA CLJU_RS06035 PF00091 Tubulin/FtsZ family, GTPase domain CLJU_RS06035 PF12327 FtsZ family, C-terminal domain CLJU_RS06040 PF03419 Sporulation factor SpoIIGA CLJU_RS06045 PF04542 Sigma-70 region 2 CLJU_RS06045 PF04545 Sigma-70, region 4 CLJU_RS06050 PF04542 Sigma-70 region 2 CLJU_RS06050 PF04539 Sigma-70 region 3 CLJU_RS06050 PF04545 Sigma-70, region 4 CLJU_RS06055 PF05239 PRC-barrel domain CLJU_RS06060 PF03477 ATP cone domain CLJU_RS06065 PF02578 Multi-copper polyphenol oxidoreductase laccase CLJU_RS06070 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS06070 PF00072 Response regulator receiver domain CLJU_RS06075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS06075 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS06075 PF00989 PAS fold CLJU_RS06075 PF16736 Single Cache-like CLJU_RS06080 PF12849 PBP superfamily domain CLJU_RS06085 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS06090 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS06095 PF00005 ABC transporter CLJU_RS06100 PF01895 PhoU domain CLJU_RS06105 PF01865 Protein of unknown function DUF47 CLJU_RS06110 PF01384 Phosphate transporter family CLJU_RS06120 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CLJU_RS06120 PF01926 50S ribosome-binding GTPase CLJU_RS06125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CLJU_RS06125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CLJU_RS06130 PF09547 Stage IV sporulation protein A (spore_IV_A) CLJU_RS06135 PF08340 Domain of unknown function (DUF1732) CLJU_RS06135 PF03755 YicC-like family, N-terminal region CLJU_RS06140 PF04025 Domain of unknown function (DUF370) CLJU_RS06145 PF00625 Guanylate kinase CLJU_RS06150 PF01192 RNA polymerase Rpb6 CLJU_RS06155 PF02441 Flavoprotein CLJU_RS06155 PF04127 DNA / pantothenate metabolism flavoprotein CLJU_RS06160 PF00271 Helicase conserved C-terminal domain CLJU_RS06160 PF18074 Primosomal protein N C-terminal domain CLJU_RS06160 PF17764 3′ DNA-binding domain (3′BD) CLJU_RS06160 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CLJU_RS06160 PF04851 Type III restriction enzyme, res subunit CLJU_RS06165 PF01327 Polypeptide deformylase CLJU_RS06170 PF00551 Formyl transferase CLJU_RS06170 PF02911 Formyl transferase, C-terminal domain CLJU_RS06175 PF04298 Putative neutral zinc metallopeptidase CLJU_RS06180 PF01029 NusB family CLJU_RS06180 PF01189 16S rRNA methyltransferase RsmB/F CLJU_RS06185 PF04055 Radical SAM superfamily CLJU_RS06195 PF00069 Protein kinase domain CLJU_RS06195 PF03793 PASTA domain CLJU_RS06200 PF03193 RsgA GTPase CLJU_RS06200 PF16745 RsgA N-terminal domain CLJU_RS06205 PF00834 Ribulose-phosphate 3 epimerase family CLJU_RS06215 PF00830 Ribosomal L28 family CLJU_RS06220 PF03780 Asp23 family, cell envelope-related function CLJU_RS06225 PF13684 Dihydroxyacetone kinase family CLJU_RS06225 PF02734 DAK2 domain CLJU_RS06230 PF17191 RecG wedge domain CLJU_RS06230 PF00270 DEAD/DEAH box helicase CLJU_RS06230 PF00271 Helicase conserved C-terminal domain CLJU_RS06240 PF01467 Cytidylyltransferase-like CLJU_RS06255 PF05636 HIGH Nucleotidyl Transferase CLJU_RS06260 PF01515 Phosphate acetyl/butaryl transferase CLJU_RS06265 PF00871 Acetokinase family CLJU_RS06275 PF01783 Ribosomal L32p protein family CLJU_RS06280 PF02504 Fatty acid synthesis protein CLJU_RS06285 PF00550 Phosphopantetheine attachment site CLJU_RS06290 PF14622 Ribonuclease-III-like CLJU_RS06290 PF00035 Double-stranded RNA binding motif CLJU_RS06300 PF06470 SMC proteins Flexible Hinge Domain CLJU_RS06300 PF02463 RecF/RecN/SMC N terminal domain CLJU_RS06305 PF00448 SRP54-type protein, GTPase domain CLJU_RS06305 PF02881 SRP54-type protein, helical bundle domain CLJU_RS06310 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CLJU_RS06315 PF02881 SRP54-type protein, helical bundle domain CLJU_RS06315 PF02978 Signal peptide binding domain CLJU_RS06315 PF00448 SRP54-type protein, GTPase domain CLJU_RS06320 PF00886 Ribosomal protein S16 CLJU_RS06330 PF05239 PRC-barrel domain CLJU_RS06330 PF01782 RimM N-terminal domain CLJU_RS06335 PF01746 tRNA (Guanine-1)-methyltransferase CLJU_RS06340 PF01245 Ribosomal protein L19 CLJU_RS06345 PF10502 Signal peptidase, peptidase S26 CLJU_RS06350 PF01926 50S ribosome-binding GTPase CLJU_RS06355 PF01351 Ribonuclease HII CLJU_RS06360 PF02021 Uncharacterised protein family UPF0102 CLJU_RS06370 PF01078 Magnesium chelatase, subunit ChlI CLJU_RS06370 PF13335 Magnesium chelatase, subunit ChlI C-terminal CLJU_RS06375 PF02481 DNA recombination-mediator protein A CLJU_RS06380 PF01396 Topoisomerase DNA binding C4 zinc finger CLJU_RS06380 PF01751 Toprim domain CLJU_RS06380 PF01131 DNA topoisomerase CLJU_RS06385 PF06018 CodY GAF-like domain CLJU_RS06385 PF08222 CodY helix-turn-helix domain CLJU_RS06390 PF00318 Ribosomal protein S2 CLJU_RS06395 PF00889 Elongation factor TS CLJU_RS06400 PF00696 Amino acid kinase family CLJU_RS06405 PF01765 Ribosome recycling factor CLJU_RS06410 PF01255 Putative undecaprenyl diphosphate synthase CLJU_RS06420 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CLJU_RS06420 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLJU_RS06420 PF13288 DXP reductoisomerase C-terminal domain CLJU_RS06425 PF17820 PDZ domain CLJU_RS06425 PF02163 Peptidase family M50 CLJU_RS06430 PF04551 GcpE protein CLJU_RS06435 PF17384 RimP C-terminal SH3 domain CLJU_RS06435 PF02576 RimP N-terminal domain CLJU_RS06440 PF00575 S1 RNA binding domain CLJU_RS06440 PF08529 NusA N-terminal domain CLJU_RS06440 PF13184 NusA-like KH domain CLJU_RS06445 PF04296 Protein of unknown function (DUF448) CLJU_RS06455 PF00009 Elongation factor Tu GTP binding domain CLJU_RS06455 PF11987 Translation-initiation factor 2 CLJU_RS06455 PF04760 Translation initiation factor IF-2, N-terminal region CLJU_RS06460 PF02033 Ribosome-binding factor A CLJU_RS06465 PF01368 DHH family CLJU_RS06465 PF02272 DHHA1 domain CLJU_RS06470 PF16198 tRNA pseudouridylate synthase B C-terminal domain CLJU_RS06470 PF01509 TruB family pseudouridylate synthase (N terminal domain) CLJU_RS06475 PF06574 FAD synthetase CLJU_RS06475 PF01687 Riboflavin kinase CLJU_RS06480 PF00312 Ribosomal protein S15 CLJU_RS06485 PF03725 3' exoribonuclease family, domain 2 CLJU_RS06485 PF01138 3' exoribonuclease family, domain 1 CLJU_RS06485 PF00575 S1 RNA binding domain CLJU_RS06485 PF00013 KH domain CLJU_RS06485 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CLJU_RS06490 PF05193 Peptidase M16 inactive domain CLJU_RS06490 PF00675 Insulinase (Peptidase family M16) CLJU_RS06500 PF00574 Clp protease CLJU_RS06505 PF17854 FtsK alpha domain CLJU_RS06505 PF09397 Ftsk gamma domain CLJU_RS06505 PF01580 FtsK/SpoIIIE family CLJU_RS06510 PF00919 Uncharacterized protein family UPF0004 CLJU_RS06510 PF18693 TRAM domain CLJU_RS06510 PF04055 Radical SAM superfamily CLJU_RS06515 PF01066 CDP-alcohol phosphatidyltransferase CLJU_RS06520 PF00154 recA bacterial DNA recombination protein CLJU_RS06525 PF01966 HD domain CLJU_RS06525 PF00013 KH domain CLJU_RS06525 PF12072 Domain of unknown function (DUF3552) CLJU_RS06530 PF04232 Stage V sporulation protein S (SpoVS) CLJU_RS06545 PF00892 EamA-like transporter family CLJU_RS06550 PF00155 Aminotransferase class I and II CLJU_RS06555 PF00381 PTS HPr component phosphorylation site CLJU_RS06560 PF04070 Domain of unknown function (DUF378) CLJU_RS06565 PF00206 Lyase CLJU_RS06565 PF10397 Adenylosuccinate lyase C-terminus CLJU_RS06575 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLJU_RS06580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLJU_RS06580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLJU_RS06585 PF00768 D-alanyl-D-alanine carboxypeptidase CLJU_RS06585 PF07943 Penicillin-binding protein 5, C-terminal domain CLJU_RS06595 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CLJU_RS06595 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CLJU_RS06595 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CLJU_RS06600 PF02581 Thiamine monophosphate synthase CLJU_RS06605 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS06605 PF00072 Response regulator receiver domain CLJU_RS06610 PF00672 HAMP domain CLJU_RS06610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS06610 PF02743 Cache domain CLJU_RS06615 PF03965 Penicillinase repressor CLJU_RS06620 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS06620 PF05569 BlaR1 peptidase M56 CLJU_RS06630 PF01174 SNO glutamine amidotransferase family CLJU_RS06640 PF07944 Beta-L-arabinofuranosidase, GH127 CLJU_RS06650 PF01497 Periplasmic binding protein CLJU_RS06650 PF12833 Helix-turn-helix domain CLJU_RS06655 PF03965 Penicillinase repressor CLJU_RS06675 PF09339 IclR helix-turn-helix domain CLJU_RS06675 PF01614 Bacterial transcriptional regulator CLJU_RS06680 PF01081 KDPG and KHG aldolase CLJU_RS06685 PF07690 Major Facilitator Superfamily CLJU_RS06690 PF02224 Cytidylate kinase CLJU_RS06695 PF01327 Polypeptide deformylase CLJU_RS06700 PF01871 AMMECR1 CLJU_RS06700 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLJU_RS06710 PF07883 Cupin domain CLJU_RS06710 PF01381 Helix-turn-helix CLJU_RS06745 PF01594 AI-2E family transporter CLJU_RS06755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS06755 PF00672 HAMP domain CLJU_RS06755 PF02743 Cache domain CLJU_RS06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS06760 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS06765 PF00072 Response regulator receiver domain CLJU_RS06765 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS06770 PF00005 ABC transporter CLJU_RS06785 PF00072 Response regulator receiver domain CLJU_RS06785 PF04397 LytTr DNA-binding domain CLJU_RS06790 PF02743 Cache domain CLJU_RS06790 PF00672 HAMP domain CLJU_RS06790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS06805 PF12729 Four helix bundle sensory module for signal transduction CLJU_RS06805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS06805 PF00672 HAMP domain CLJU_RS06815 PF01012 Electron transfer flavoprotein domain CLJU_RS06820 PF00766 Electron transfer flavoprotein FAD-binding domain CLJU_RS06820 PF01012 Electron transfer flavoprotein domain CLJU_RS06825 PF01565 FAD binding domain CLJU_RS06825 PF02913 FAD linked oxidases, C-terminal domain CLJU_RS06830 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS06830 PF07729 FCD domain CLJU_RS06845 PF03169 OPT oligopeptide transporter protein CLJU_RS06855 PF07670 Nucleoside recognition CLJU_RS06855 PF17910 FeoB cytosolic helical domain CLJU_RS06855 PF07664 Ferrous iron transport protein B C terminus CLJU_RS06855 PF04023 FeoA domain CLJU_RS06855 PF02421 Ferrous iron transport protein B CLJU_RS06865 PF04023 FeoA domain CLJU_RS06865 PF07664 Ferrous iron transport protein B C terminus CLJU_RS06865 PF02421 Ferrous iron transport protein B CLJU_RS06865 PF17910 FeoB cytosolic helical domain CLJU_RS06865 PF07670 Nucleoside recognition CLJU_RS06875 PF00258 Flavodoxin CLJU_RS06890 PF11188 Protein of unknown function (DUF2975) CLJU_RS06895 PF13443 Cro/C1-type HTH DNA-binding domain CLJU_RS06900 PF13282 Domain of unknown function (DUF4070) CLJU_RS06900 PF04055 Radical SAM superfamily CLJU_RS06900 PF02310 B12 binding domain CLJU_RS06905 PF00664 ABC transporter transmembrane region CLJU_RS06905 PF00005 ABC transporter CLJU_RS06920 PF00672 HAMP domain CLJU_RS06920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS06920 PF17200 Single Cache domain 2 CLJU_RS06925 PF13411 MerR HTH family regulatory protein CLJU_RS06925 PF07739 TipAS antibiotic-recognition domain CLJU_RS06930 PF01047 MarR family CLJU_RS06935 PF07690 Major Facilitator Superfamily CLJU_RS06945 PF00106 short chain dehydrogenase CLJU_RS06950 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS06950 PF00072 Response regulator receiver domain CLJU_RS06955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS06970 PF13411 MerR HTH family regulatory protein CLJU_RS06985 PF00005 ABC transporter CLJU_RS06990 PF02687 FtsX-like permease family CLJU_RS07000 PF07690 Major Facilitator Superfamily CLJU_RS07005 PF00155 Aminotransferase class I and II CLJU_RS07015 PF00005 ABC transporter CLJU_RS07020 PF13538 UvrD-like helicase C-terminal domain CLJU_RS07025 PF00293 NUDIX domain CLJU_RS07030 PF00440 Bacterial regulatory proteins, tetR family CLJU_RS07030 PF17754 MftR C-terminal domain CLJU_RS07035 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CLJU_RS07035 PF00391 PEP-utilising enzyme, mobile domain CLJU_RS07045 PF07943 Penicillin-binding protein 5, C-terminal domain CLJU_RS07045 PF00768 D-alanyl-D-alanine carboxypeptidase CLJU_RS07050 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS07050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS07055 PF00072 Response regulator receiver domain CLJU_RS07055 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS07060 PF00072 Response regulator receiver domain CLJU_RS07060 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS07065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS07075 PF00005 ABC transporter CLJU_RS07080 PF02687 FtsX-like permease family CLJU_RS07095 PF03851 UV-endonuclease UvdE CLJU_RS07135 PF00266 Aminotransferase class-V CLJU_RS07145 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system CLJU_RS07175 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLJU_RS07180 PF03313 Serine dehydratase alpha chain CLJU_RS07185 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS07185 PF00563 EAL domain CLJU_RS07185 PF00498 FHA domain CLJU_RS07190 PF00176 SNF2 family N-terminal domain CLJU_RS07190 PF00271 Helicase conserved C-terminal domain CLJU_RS07190 PF04434 SWIM zinc finger CLJU_RS07195 PF04294 VanW like protein CLJU_RS07205 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLJU_RS07205 PF02256 Iron hydrogenase small subunit CLJU_RS07205 PF00037 4Fe-4S binding domain CLJU_RS07205 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLJU_RS07210 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLJU_RS07210 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLJU_RS07210 PF00037 4Fe-4S binding domain CLJU_RS07225 PF12146 Serine aminopeptidase, S33 CLJU_RS07230 PF17760 UvrA interaction domain CLJU_RS07230 PF17755 UvrA DNA-binding domain CLJU_RS07240 PF00793 DAHP synthetase I family CLJU_RS07245 PF00589 Phage integrase family CLJU_RS07250 PF00360 Phytochrome region CLJU_RS07250 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS07250 PF01590 GAF domain CLJU_RS07250 PF00563 EAL domain CLJU_RS07255 PF12729 Four helix bundle sensory module for signal transduction CLJU_RS07255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS07255 PF00672 HAMP domain CLJU_RS07260 PF07690 Major Facilitator Superfamily CLJU_RS07270 PF01966 HD domain CLJU_RS07270 PF00072 Response regulator receiver domain CLJU_RS07290 PF13411 MerR HTH family regulatory protein CLJU_RS07295 PF01638 HxlR-like helix-turn-helix CLJU_RS07305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLJU_RS07305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLJU_RS07335 PF02517 CPBP intramembrane metalloprotease CLJU_RS07340 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS07340 PF00072 Response regulator receiver domain CLJU_RS07345 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS07345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS07345 PF00672 HAMP domain CLJU_RS07350 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS07350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLJU_RS07355 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS07360 PF13556 PucR C-terminal helix-turn-helix domain CLJU_RS07375 PF01713 Smr domain CLJU_RS07375 PF00488 MutS domain V CLJU_RS07380 PF05343 M42 glutamyl aminopeptidase CLJU_RS07385 PF12679 ABC-2 family transporter protein CLJU_RS07390 PF00005 ABC transporter CLJU_RS07395 PF13291 ACT domain CLJU_RS07395 PF00291 Pyridoxal-phosphate dependent enzyme CLJU_RS07410 PF00156 Phosphoribosyl transferase domain CLJU_RS07415 PF00860 Permease family CLJU_RS07425 PF07728 AAA domain (dynein-related subfamily) CLJU_RS07425 PF12102 Domain of unknown function (DUF3578) CLJU_RS07435 PF00664 ABC transporter transmembrane region CLJU_RS07435 PF00005 ABC transporter CLJU_RS07440 PF00664 ABC transporter transmembrane region CLJU_RS07440 PF00005 ABC transporter CLJU_RS07455 PF13280 WYL domain CLJU_RS07455 PF08279 HTH domain CLJU_RS07460 PF06445 GyrI-like small molecule binding domain CLJU_RS07465 PF01554 MatE CLJU_RS07470 PF12833 Helix-turn-helix domain CLJU_RS07470 PF02311 AraC-like ligand binding domain CLJU_RS07480 PF00881 Nitroreductase family CLJU_RS07485 PF05899 Protein of unknown function (DUF861) CLJU_RS07485 PF07883 Cupin domain CLJU_RS07490 PF01546 Peptidase family M20/M25/M40 CLJU_RS07495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLJU_RS07495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLJU_RS07500 PF00696 Amino acid kinase family CLJU_RS07505 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CLJU_RS07505 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CLJU_RS07510 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CLJU_RS07515 PF01979 Amidohydrolase family CLJU_RS07520 PF01979 Amidohydrolase family CLJU_RS07525 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CLJU_RS07550 PF13533 Biotin-lipoyl like CLJU_RS07565 PF00893 Small Multidrug Resistance protein CLJU_RS07570 PF01047 MarR family CLJU_RS07575 PF00072 Response regulator receiver domain CLJU_RS07575 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS07580 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS07580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS07590 PF00005 ABC transporter CLJU_RS07595 PF12704 MacB-like periplasmic core domain CLJU_RS07595 PF00005 ABC transporter CLJU_RS07595 PF02687 FtsX-like permease family CLJU_RS07600 PF13411 MerR HTH family regulatory protein CLJU_RS07600 PF07739 TipAS antibiotic-recognition domain CLJU_RS07605 PF00672 HAMP domain CLJU_RS07605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS07605 PF05227 CHASE3 domain CLJU_RS07615 PF00384 Molybdopterin oxidoreductase CLJU_RS07615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLJU_RS07615 PF01568 Molydopterin dinucleotide binding domain CLJU_RS07625 PF09861 Lactate racemase N-terminal domain CLJU_RS07630 PF00230 Major intrinsic protein CLJU_RS07635 PF00731 AIR carboxylase CLJU_RS07640 PF03323 Bacillus/Clostridium GerA spore germination protein CLJU_RS07645 PF03845 Spore germination protein CLJU_RS07650 PF05504 Spore germination B3/ GerAC like, C-terminal CLJU_RS07665 PF01022 Bacterial regulatory protein, arsR family CLJU_RS07670 PF06953 Arsenical resistance operon trans-acting repressor ArsD CLJU_RS07675 PF02374 Anion-transporting ATPase CLJU_RS07680 PF01758 Sodium Bile acid symporter family CLJU_RS07695 PF04545 Sigma-70, region 4 CLJU_RS07695 PF04542 Sigma-70 region 2 CLJU_RS07705 PF02557 D-alanyl-D-alanine carboxypeptidase CLJU_RS07715 PF00072 Response regulator receiver domain CLJU_RS07715 PF01966 HD domain CLJU_RS07720 PF05711 Macrocin-O-methyltransferase (TylF) CLJU_RS07725 PF02073 Thermophilic metalloprotease (M29) CLJU_RS07730 PF08220 DeoR-like helix-turn-helix domain CLJU_RS07730 PF00455 DeoR C terminal sensor domain CLJU_RS07735 PF00083 Sugar (and other) transporter CLJU_RS07745 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS07745 PF00072 Response regulator receiver domain CLJU_RS07750 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS07750 PF18719 ArlS sensor domain CLJU_RS07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS07755 PF01569 PAP2 superfamily CLJU_RS07765 PF12708 Pectate lyase superfamily protein CLJU_RS07765 PF09992 Phosphodiester glycosidase CLJU_RS07800 PF00912 Transglycosylase CLJU_RS07800 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS07805 PF02673 Bacitracin resistance protein BacA CLJU_RS07810 PF00912 Transglycosylase CLJU_RS07810 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS07820 PF09335 SNARE associated Golgi protein CLJU_RS07825 PF01569 PAP2 superfamily CLJU_RS07835 PF01769 Divalent cation transporter CLJU_RS07835 PF03448 MgtE intracellular N domain CLJU_RS07835 PF00571 CBS domain CLJU_RS07840 PF01566 Natural resistance-associated macrophage protein CLJU_RS07850 PF00324 Amino acid permease CLJU_RS07865 PF03358 NADPH-dependent FMN reductase CLJU_RS07875 PF00425 chorismate binding enzyme CLJU_RS07875 PF04715 Anthranilate synthase component I, N terminal region CLJU_RS07880 PF00117 Glutamine amidotransferase class-I CLJU_RS07880 PF02885 Glycosyl transferase family, helical bundle domain CLJU_RS07880 PF00591 Glycosyl transferase family, a/b domain CLJU_RS07885 PF00591 Glycosyl transferase family, a/b domain CLJU_RS07885 PF02885 Glycosyl transferase family, helical bundle domain CLJU_RS07890 PF00218 Indole-3-glycerol phosphate synthase CLJU_RS07895 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CLJU_RS07900 PF00291 Pyridoxal-phosphate dependent enzyme CLJU_RS07905 PF00290 Tryptophan synthase alpha chain CLJU_RS07910 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase CLJU_RS07915 PF08240 Alcohol dehydrogenase GroES-like domain CLJU_RS07915 PF00107 Zinc-binding dehydrogenase CLJU_RS07920 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS07920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLJU_RS07925 PF03466 LysR substrate binding domain CLJU_RS07925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS07935 PF04542 Sigma-70 region 2 CLJU_RS07935 PF08281 Sigma-70, region 4 CLJU_RS07945 PF03551 Transcriptional regulator PadR-like family CLJU_RS07965 PF01047 MarR family CLJU_RS07970 PF01554 MatE CLJU_RS07975 PF01327 Polypeptide deformylase CLJU_RS07980 PF01475 Ferric uptake regulator family CLJU_RS07985 PF02743 Cache domain CLJU_RS07985 PF00672 HAMP domain CLJU_RS07985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS08000 PF01047 MarR family CLJU_RS08010 PF07690 Major Facilitator Superfamily CLJU_RS08025 PF04397 LytTr DNA-binding domain CLJU_RS08025 PF00072 Response regulator receiver domain CLJU_RS08035 PF04239 Protein of unknown function (DUF421) CLJU_RS08045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLJU_RS08045 PF13378 Enolase C-terminal domain-like CLJU_RS08050 PF13520 Amino acid permease CLJU_RS08060 PF03845 Spore germination protein CLJU_RS08070 PF03845 Spore germination protein CLJU_RS08085 PF03323 Bacillus/Clostridium GerA spore germination protein CLJU_RS08095 PF00171 Aldehyde dehydrogenase family CLJU_RS08095 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS08100 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS08100 PF00171 Aldehyde dehydrogenase family CLJU_RS08105 PF13361 UvrD-like helicase C-terminal domain CLJU_RS08105 PF00580 UvrD/REP helicase N-terminal domain CLJU_RS08295 PF11999 Protein of unknown function (DUF3494) CLJU_RS08295 PF02368 Bacterial Ig-like domain (group 2) CLJU_RS08310 PF13361 UvrD-like helicase C-terminal domain CLJU_RS08310 PF00580 UvrD/REP helicase N-terminal domain CLJU_RS08325 PF01569 PAP2 superfamily CLJU_RS08350 PF02915 Rubrerythrin CLJU_RS08355 PF01098 Cell cycle protein CLJU_RS08365 PF04239 Protein of unknown function (DUF421) CLJU_RS08375 PF00248 Aldo/keto reductase family CLJU_RS08390 PF01497 Periplasmic binding protein CLJU_RS08400 PF01497 Periplasmic binding protein CLJU_RS08405 PF01032 FecCD transport family CLJU_RS08415 PF01497 Periplasmic binding protein CLJU_RS08420 PF00005 ABC transporter CLJU_RS08430 PF01497 Periplasmic binding protein CLJU_RS08445 PF01497 Periplasmic binding protein CLJU_RS08450 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLJU_RS08455 PF00005 ABC transporter CLJU_RS08470 PF01497 Periplasmic binding protein CLJU_RS08480 PF13247 4Fe-4S dicluster domain CLJU_RS08480 PF12800 4Fe-4S binding domain CLJU_RS08485 PF00037 4Fe-4S binding domain CLJU_RS08485 PF02256 Iron hydrogenase small subunit CLJU_RS08485 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLJU_RS08485 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLJU_RS08500 PF00072 Response regulator receiver domain CLJU_RS08500 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS08505 PF18719 ArlS sensor domain CLJU_RS08505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS08505 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS08510 PF02491 SHS2 domain inserted in FTSA CLJU_RS08515 PF07687 Peptidase dimerisation domain CLJU_RS08515 PF01546 Peptidase family M20/M25/M40 CLJU_RS08520 PF00849 RNA pseudouridylate synthase CLJU_RS08520 PF01479 S4 domain CLJU_RS08525 PF14667 Polysaccharide biosynthesis C-terminal domain CLJU_RS08525 PF01943 Polysaccharide biosynthesis protein CLJU_RS08530 PF00310 Glutamine amidotransferases class-II CLJU_RS08530 PF04898 Glutamate synthase central domain CLJU_RS08530 PF01645 Conserved region in glutamate synthase CLJU_RS08530 PF01493 GXGXG motif CLJU_RS08535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLJU_RS08535 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS08540 PF01546 Peptidase family M20/M25/M40 CLJU_RS08545 PF02590 Predicted SPOUT methyltransferase CLJU_RS08565 PF06445 GyrI-like small molecule binding domain CLJU_RS08575 PF00072 Response regulator receiver domain CLJU_RS08575 PF00196 Bacterial regulatory proteins, luxR family CLJU_RS08580 PF12801 4Fe-4S binding domain CLJU_RS08580 PF04205 FMN-binding domain CLJU_RS08590 PF12146 Serine aminopeptidase, S33 CLJU_RS08595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS08600 PF02371 Transposase IS116/IS110/IS902 family CLJU_RS08600 PF01548 Transposase CLJU_RS08620 PF00893 Small Multidrug Resistance protein CLJU_RS08625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS08625 PF03466 LysR substrate binding domain CLJU_RS08655 PF01381 Helix-turn-helix CLJU_RS08660 PF17158 Membrane-associated sensor, integral membrane domain CLJU_RS08660 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS08665 PF00293 NUDIX domain CLJU_RS08690 PF08546 Ketopantoate reductase PanE/ApbA C terminal CLJU_RS08690 PF02558 Ketopantoate reductase PanE/ApbA CLJU_RS08695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS08695 PF03466 LysR substrate binding domain CLJU_RS08700 PF13537 Glutamine amidotransferase domain CLJU_RS08700 PF00733 Asparagine synthase CLJU_RS08705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS08705 PF03466 LysR substrate binding domain CLJU_RS08710 PF00072 Response regulator receiver domain CLJU_RS08710 PF08664 YcbB domain CLJU_RS08715 PF05525 Branched-chain amino acid transport protein CLJU_RS08725 PF01638 HxlR-like helix-turn-helix CLJU_RS08730 PF02567 Phenazine biosynthesis-like protein CLJU_RS08755 PF00248 Aldo/keto reductase family CLJU_RS08765 PF01327 Polypeptide deformylase CLJU_RS08770 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS08770 PF00155 Aminotransferase class I and II CLJU_RS08775 PF00072 Response regulator receiver domain CLJU_RS08775 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS08780 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLJU_RS08780 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLJU_RS08795 PF00324 Amino acid permease CLJU_RS08800 PF03063 Prismane/CO dehydrogenase family CLJU_RS08805 PF10662 Ethanolamine utilisation - propanediol utilisation CLJU_RS08810 PF00936 BMC domain CLJU_RS08815 PF02625 XdhC and CoxI family CLJU_RS08815 PF13478 XdhC Rossmann domain CLJU_RS08825 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS08830 PF13411 MerR HTH family regulatory protein CLJU_RS08830 PF06445 GyrI-like small molecule binding domain CLJU_RS08840 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLJU_RS08850 PF01638 HxlR-like helix-turn-helix CLJU_RS08860 PF13026 Protein of unknown function (DUF3887) CLJU_RS08860 PF12146 Serine aminopeptidase, S33 CLJU_RS08865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS08865 PF00672 HAMP domain CLJU_RS08865 PF05227 CHASE3 domain CLJU_RS08870 PF05173 Dihydrodipicolinate reductase, C-terminus CLJU_RS08870 PF01113 Dihydrodipicolinate reductase, N-terminus CLJU_RS08885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLJU_RS08890 PF00005 ABC transporter CLJU_RS08895 PF00005 ABC transporter CLJU_RS08895 PF02687 FtsX-like permease family CLJU_RS08895 PF12704 MacB-like periplasmic core domain CLJU_RS08900 PF04198 Putative sugar-binding domain CLJU_RS08905 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLJU_RS08910 PF01791 DeoC/LacD family aldolase CLJU_RS08915 PF01773 Na+ dependent nucleoside transporter N-terminus CLJU_RS08915 PF07662 Na+ dependent nucleoside transporter C-terminus CLJU_RS08920 PF01676 Metalloenzyme superfamily CLJU_RS08925 PF02885 Glycosyl transferase family, helical bundle domain CLJU_RS08925 PF00591 Glycosyl transferase family, a/b domain CLJU_RS08925 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CLJU_RS08960 PF01261 Xylose isomerase-like TIM barrel CLJU_RS08965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLJU_RS08965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLJU_RS08970 PF01263 Aldose 1-epimerase CLJU_RS08975 PF00083 Sugar (and other) transporter CLJU_RS08980 PF00480 ROK family CLJU_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS08995 PF00005 ABC transporter CLJU_RS09000 PF09084 NMT1/THI5 like CLJU_RS09010 PF00005 ABC transporter CLJU_RS09060 PF03845 Spore germination protein CLJU_RS09065 PF03323 Bacillus/Clostridium GerA spore germination protein CLJU_RS09070 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS09080 PF01381 Helix-turn-helix CLJU_RS09085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS09095 PF02796 Helix-turn-helix domain of resolvase CLJU_RS09095 PF00239 Resolvase, N terminal domain CLJU_RS09110 PF14537 Cytochrome c3 CLJU_RS09110 PF00890 FAD binding domain CLJU_RS09130 PF00563 EAL domain CLJU_RS09130 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS09130 PF03707 Bacterial signalling protein N terminal repeat CLJU_RS09135 PF05067 Manganese containing catalase CLJU_RS09145 PF03190 Protein of unknown function, DUF255 CLJU_RS09160 PF02743 Cache domain CLJU_RS09160 PF00672 HAMP domain CLJU_RS09160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS09200 PF01476 LysM domain CLJU_RS09200 PF00704 Glycosyl hydrolases family 18 CLJU_RS09240 PF00072 Response regulator receiver domain CLJU_RS09255 PF02743 Cache domain CLJU_RS09255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS09255 PF00672 HAMP domain CLJU_RS09260 PF01047 MarR family CLJU_RS09265 PF00005 ABC transporter CLJU_RS09265 PF00664 ABC transporter transmembrane region CLJU_RS09270 PF00664 ABC transporter transmembrane region CLJU_RS09270 PF00005 ABC transporter CLJU_RS09275 PF03965 Penicillinase repressor CLJU_RS09285 PF04294 VanW like protein CLJU_RS09305 PF00535 Glycosyl transferase family 2 CLJU_RS09310 PF00535 Glycosyl transferase family 2 CLJU_RS09310 PF13181 Tetratricopeptide repeat CLJU_RS09315 PF00005 ABC transporter CLJU_RS09320 PF04294 VanW like protein CLJU_RS09325 PF00005 ABC transporter CLJU_RS09325 PF12848 ABC transporter CLJU_RS09340 PF08439 Oligopeptidase F CLJU_RS09340 PF01432 Peptidase family M3 CLJU_RS09355 PF07683 Cobalamin synthesis protein cobW C-terminal domain CLJU_RS09355 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLJU_RS09365 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLJU_RS09370 PF02310 B12 binding domain CLJU_RS09370 PF02607 B12 binding domain CLJU_RS09375 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLJU_RS09390 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CLJU_RS09390 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLJU_RS09405 PF13333 Integrase core domain CLJU_RS09405 PF00665 Integrase core domain CLJU_RS09405 PF13276 HTH-like domain CLJU_RS09410 PF08331 Domain of unknown function (DUF1730) CLJU_RS09415 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CLJU_RS09420 PF07969 Amidohydrolase family CLJU_RS09430 PF03459 TOBE domain CLJU_RS09445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLJU_RS09445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLJU_RS09450 PF07687 Peptidase dimerisation domain CLJU_RS09450 PF01546 Peptidase family M20/M25/M40 CLJU_RS09455 PF00196 Bacterial regulatory proteins, luxR family CLJU_RS09455 PF17874 MalT-like TPR region CLJU_RS09460 PF07687 Peptidase dimerisation domain CLJU_RS09460 PF01546 Peptidase family M20/M25/M40 CLJU_RS09465 PF13520 Amino acid permease CLJU_RS09475 PF00563 EAL domain CLJU_RS09475 PF08668 HDOD domain CLJU_RS09495 PF01381 Helix-turn-helix CLJU_RS09515 PF02567 Phenazine biosynthesis-like protein CLJU_RS09520 PF00892 EamA-like transporter family CLJU_RS09530 PF00072 Response regulator receiver domain CLJU_RS09530 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS09535 PF16736 Single Cache-like CLJU_RS09535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS09535 PF00989 PAS fold CLJU_RS09535 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS09545 PF01613 Flavin reductase like domain CLJU_RS09545 PF00301 Rubredoxin CLJU_RS09550 PF00210 Ferritin-like domain CLJU_RS09555 PF00313 'Cold-shock' DNA-binding domain CLJU_RS09560 PF00293 NUDIX domain CLJU_RS09560 PF09297 NADH pyrophosphatase zinc ribbon domain CLJU_RS09570 PF07875 Coat F domain CLJU_RS09575 PF08240 Alcohol dehydrogenase GroES-like domain CLJU_RS09575 PF00107 Zinc-binding dehydrogenase CLJU_RS09575 PF13823 Alcohol dehydrogenase GroES-associated CLJU_RS09585 PF07875 Coat F domain CLJU_RS09590 PF03358 NADPH-dependent FMN reductase CLJU_RS09595 PF00313 'Cold-shock' DNA-binding domain CLJU_RS09600 PF00155 Aminotransferase class I and II CLJU_RS09605 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS09605 PF00155 Aminotransferase class I and II CLJU_RS09620 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS09625 PF00072 Response regulator receiver domain CLJU_RS09625 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS09630 PF00005 ABC transporter CLJU_RS09640 PF00534 Glycosyl transferases group 1 CLJU_RS09640 PF13439 Glycosyltransferase Family 4 CLJU_RS09650 PF13439 Glycosyltransferase Family 4 CLJU_RS09650 PF00534 Glycosyl transferases group 1 CLJU_RS09660 PF13677 Membrane MotB of proton-channel complex MotA/MotB CLJU_RS09660 PF00691 OmpA family CLJU_RS09665 PF01618 MotA/TolQ/ExbB proton channel family CLJU_RS09675 PF07690 Major Facilitator Superfamily CLJU_RS09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS09685 PF08448 PAS fold CLJU_RS09685 PF13426 PAS domain CLJU_RS09685 PF00072 Response regulator receiver domain CLJU_RS09685 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS09690 PF00183 Hsp90 protein CLJU_RS09700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS09700 PF03466 LysR substrate binding domain CLJU_RS09710 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS09710 PF00072 Response regulator receiver domain CLJU_RS09715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS09715 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS09735 PF01476 LysM domain CLJU_RS09735 PF00704 Glycosyl hydrolases family 18 CLJU_RS09740 PF03313 Serine dehydratase alpha chain CLJU_RS09750 PF04011 LemA family CLJU_RS09765 PF13411 MerR HTH family regulatory protein CLJU_RS09770 PF01370 NAD dependent epimerase/dehydratase family CLJU_RS09775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS09785 PF04607 Region found in RelA / SpoT proteins CLJU_RS09790 PF02743 Cache domain CLJU_RS09790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS09790 PF00672 HAMP domain CLJU_RS09795 PF03747 ADP-ribosylglycohydrolase CLJU_RS09805 PF00881 Nitroreductase family CLJU_RS09820 PF13247 4Fe-4S dicluster domain CLJU_RS09820 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLJU_RS09820 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS09840 PF00899 ThiF family CLJU_RS09845 PF00005 ABC transporter CLJU_RS09850 PF01032 FecCD transport family CLJU_RS09855 PF01497 Periplasmic binding protein CLJU_RS09865 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CLJU_RS09865 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CLJU_RS09870 PF00158 Sigma-54 interaction domain CLJU_RS09870 PF13426 PAS domain CLJU_RS09870 PF02954 Bacterial regulatory protein, Fis family CLJU_RS09875 PF02954 Bacterial regulatory protein, Fis family CLJU_RS09875 PF00158 Sigma-54 interaction domain CLJU_RS09875 PF13426 PAS domain CLJU_RS09880 PF12849 PBP superfamily domain CLJU_RS09885 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS09890 PF00005 ABC transporter CLJU_RS09895 PF03454 MoeA C-terminal region (domain IV) CLJU_RS09895 PF00994 Probable molybdopterin binding domain CLJU_RS09895 PF03453 MoeA N-terminal region (domain I and II) CLJU_RS09900 PF03453 MoeA N-terminal region (domain I and II) CLJU_RS09900 PF03454 MoeA C-terminal region (domain IV) CLJU_RS09900 PF00994 Probable molybdopterin binding domain CLJU_RS09910 PF13426 PAS domain CLJU_RS09910 PF02954 Bacterial regulatory protein, Fis family CLJU_RS09910 PF00158 Sigma-54 interaction domain CLJU_RS09915 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CLJU_RS09915 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CLJU_RS09925 PF00899 ThiF family CLJU_RS09930 PF02954 Bacterial regulatory protein, Fis family CLJU_RS09930 PF00158 Sigma-54 interaction domain CLJU_RS09930 PF13426 PAS domain CLJU_RS09940 PF00892 EamA-like transporter family CLJU_RS09945 PF01261 Xylose isomerase-like TIM barrel CLJU_RS09950 PF03717 Penicillin-binding Protein dimerisation domain CLJU_RS09950 PF03717 Penicillin-binding Protein dimerisation domain CLJU_RS09950 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS09950 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS09965 PF12320 Type 5 capsule protein repressor C-terminal domain CLJU_RS09965 PF00149 Calcineurin-like phosphoesterase CLJU_RS09970 PF13175 AAA ATPase domain CLJU_RS09975 PF01012 Electron transfer flavoprotein domain CLJU_RS09980 PF01012 Electron transfer flavoprotein domain CLJU_RS09980 PF00766 Electron transfer flavoprotein FAD-binding domain CLJU_RS09985 PF02913 FAD linked oxidases, C-terminal domain CLJU_RS09985 PF01565 FAD binding domain CLJU_RS09995 PF00672 HAMP domain CLJU_RS09995 PF17202 Single cache domain 3 CLJU_RS09995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS10005 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CLJU_RS10005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CLJU_RS10010 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CLJU_RS10010 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CLJU_RS10015 PF00920 Dehydratase family CLJU_RS10020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLJU_RS10020 PF00205 Thiamine pyrophosphate enzyme, central domain CLJU_RS10020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLJU_RS10025 PF10369 Small subunit of acetolactate synthase CLJU_RS10035 PF00289 Biotin carboxylase, N-terminal domain CLJU_RS10035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLJU_RS10035 PF02785 Biotin carboxylase C-terminal domain CLJU_RS10045 PF00202 Aminotransferase class-III CLJU_RS10060 PF02436 Conserved carboxylase domain CLJU_RS10060 PF00682 HMGL-like CLJU_RS10060 PF00364 Biotin-requiring enzyme CLJU_RS10065 PF03746 LamB/YcsF family CLJU_RS10075 PF00474 Sodium:solute symporter family CLJU_RS10105 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLJU_RS10110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLJU_RS10110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLJU_RS10115 PF00294 pfkB family carbohydrate kinase CLJU_RS10120 PF00455 DeoR C terminal sensor domain CLJU_RS10120 PF08220 DeoR-like helix-turn-helix domain CLJU_RS10185 PF02607 B12 binding domain CLJU_RS10185 PF02310 B12 binding domain CLJU_RS10190 PF01048 Phosphorylase superfamily CLJU_RS10195 PF05198 Translation initiation factor IF-3, N-terminal domain CLJU_RS10195 PF00707 Translation initiation factor IF-3, C-terminal domain CLJU_RS10200 PF00072 Response regulator receiver domain CLJU_RS10200 PF08664 YcbB domain CLJU_RS10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS10210 PF00375 Sodium:dicarboxylate symporter family CLJU_RS10215 PF13520 Amino acid permease CLJU_RS10220 PF00480 ROK family CLJU_RS10235 PF01734 Patatin-like phospholipase CLJU_RS10240 PF01406 tRNA synthetases class I (C) catalytic domain CLJU_RS10255 PF00072 Response regulator receiver domain CLJU_RS10255 PF01966 HD domain CLJU_RS10265 PF04239 Protein of unknown function (DUF421) CLJU_RS10270 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CLJU_RS10280 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CLJU_RS10290 PF00106 short chain dehydrogenase CLJU_RS10300 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLJU_RS10315 PF02899 Phage integrase, N-terminal SAM-like domain CLJU_RS10315 PF00589 Phage integrase family CLJU_RS10325 PF00717 Peptidase S24-like CLJU_RS10325 PF01726 LexA DNA binding domain CLJU_RS10330 PF00817 impB/mucB/samB family CLJU_RS10330 PF11799 impB/mucB/samB family C-terminal domain CLJU_RS10340 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLJU_RS10345 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLJU_RS10350 PF02607 B12 binding domain CLJU_RS10350 PF02310 B12 binding domain CLJU_RS10360 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CLJU_RS10365 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLJU_RS10370 PF00083 Sugar (and other) transporter CLJU_RS10380 PF07690 Major Facilitator Superfamily CLJU_RS10385 PF04073 Aminoacyl-tRNA editing domain CLJU_RS10390 PF04507 Csa1 family CLJU_RS10405 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS10405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLJU_RS10410 PF06838 Methionine gamma-lyase CLJU_RS10415 PF17209 Hfq protein CLJU_RS10425 PF08676 MutL C terminal dimerisation domain CLJU_RS10425 PF01119 DNA mismatch repair protein, C-terminal domain CLJU_RS10430 PF01624 MutS domain I CLJU_RS10430 PF05188 MutS domain II CLJU_RS10430 PF05192 MutS domain III CLJU_RS10430 PF00488 MutS domain V CLJU_RS10430 PF05190 MutS family domain IV CLJU_RS10435 PF00919 Uncharacterized protein family UPF0004 CLJU_RS10435 PF01938 TRAM domain CLJU_RS10435 PF04055 Radical SAM superfamily CLJU_RS10445 PF00155 Aminotransferase class I and II CLJU_RS10450 PF00155 Aminotransferase class I and II CLJU_RS10460 PF02675 S-adenosylmethionine decarboxylase CLJU_RS10465 PF02401 LytB protein CLJU_RS10465 PF00575 S1 RNA binding domain CLJU_RS10470 PF02224 Cytidylate kinase CLJU_RS10480 PF01380 SIS domain CLJU_RS10480 PF01418 Helix-turn-helix domain, rpiR family CLJU_RS10485 PF01479 S4 domain CLJU_RS10485 PF00849 RNA pseudouridylate synthase CLJU_RS10500 PF00795 Carbon-nitrogen hydrolase CLJU_RS10505 PF00899 ThiF family CLJU_RS10510 PF12804 MobA-like NTP transferase domain CLJU_RS10515 PF00491 Arginase family CLJU_RS10520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS10520 PF00672 HAMP domain CLJU_RS10520 PF02743 Cache domain CLJU_RS10525 PF04961 Formiminotransferase-cyclodeaminase CLJU_RS10530 PF13520 Amino acid permease CLJU_RS10535 PF00221 Aromatic amino acid lyase CLJU_RS10540 PF01979 Amidohydrolase family CLJU_RS10545 PF01175 Urocanase Rossmann-like domain CLJU_RS10545 PF17391 Urocanase N-terminal domain CLJU_RS10545 PF17392 Urocanase C-terminal domain CLJU_RS10555 PF07837 Formiminotransferase domain, N-terminal subdomain CLJU_RS10555 PF02971 Formiminotransferase domain CLJU_RS10560 PF00202 Aminotransferase class-III CLJU_RS10565 PF00696 Amino acid kinase family CLJU_RS10570 PF01960 ArgJ family CLJU_RS10575 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLJU_RS10575 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLJU_RS10580 PF04434 SWIM zinc finger CLJU_RS10580 PF00271 Helicase conserved C-terminal domain CLJU_RS10580 PF00176 SNF2 family N-terminal domain CLJU_RS10590 PF02913 FAD linked oxidases, C-terminal domain CLJU_RS10590 PF01565 FAD binding domain CLJU_RS10595 PF00766 Electron transfer flavoprotein FAD-binding domain CLJU_RS10595 PF01012 Electron transfer flavoprotein domain CLJU_RS10600 PF01012 Electron transfer flavoprotein domain CLJU_RS10605 PF09861 Lactate racemase N-terminal domain CLJU_RS10610 PF02652 L-lactate permease CLJU_RS10615 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS10615 PF07729 FCD domain CLJU_RS10635 PF17910 FeoB cytosolic helical domain CLJU_RS10635 PF07670 Nucleoside recognition CLJU_RS10635 PF02421 Ferrous iron transport protein B CLJU_RS10635 PF07664 Ferrous iron transport protein B C terminus CLJU_RS10640 PF00571 CBS domain CLJU_RS10640 PF01380 SIS domain CLJU_RS10650 PF00750 tRNA synthetases class I (R) CLJU_RS10650 PF03485 Arginyl tRNA synthetase N terminal domain CLJU_RS10650 PF05746 DALR anticodon binding domain CLJU_RS10655 PF16363 GDP-mannose 4,6 dehydratase CLJU_RS10665 PF13416 Bacterial extracellular solute-binding protein CLJU_RS10670 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS10675 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS10680 PF08402 TOBE domain CLJU_RS10680 PF00005 ABC transporter CLJU_RS10695 PF01022 Bacterial regulatory protein, arsR family CLJU_RS10705 PF00324 Amino acid permease CLJU_RS10710 PF00488 MutS domain V CLJU_RS10710 PF05192 MutS domain III CLJU_RS10710 PF05188 MutS domain II CLJU_RS10710 PF05190 MutS family domain IV CLJU_RS10710 PF01624 MutS domain I CLJU_RS10730 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLJU_RS10735 PF02811 PHP domain CLJU_RS10740 PF02127 Aminopeptidase I zinc metalloprotease (M18) CLJU_RS10745 PF01544 CorA-like Mg2+ transporter protein CLJU_RS10750 PF01812 5-formyltetrahydrofolate cyclo-ligase family CLJU_RS10755 PF07475 HPr Serine kinase C-terminal domain CLJU_RS10755 PF02603 HPr Serine kinase N terminus CLJU_RS10760 PF05979 Bacterial protein of unknown function (DUF896) CLJU_RS10765 PF00491 Arginase family CLJU_RS10770 PF00753 Metallo-beta-lactamase superfamily CLJU_RS10770 PF00258 Flavodoxin CLJU_RS10775 PF13538 UvrD-like helicase C-terminal domain CLJU_RS10780 PF01327 Polypeptide deformylase CLJU_RS10820 PF01943 Polysaccharide biosynthesis protein CLJU_RS10825 PF00885 6,7-dimethyl-8-ribityllumazine synthase CLJU_RS10830 PF00925 GTP cyclohydrolase II CLJU_RS10830 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CLJU_RS10835 PF00677 Lumazine binding domain CLJU_RS10840 PF01872 RibD C-terminal domain CLJU_RS10840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLJU_RS10845 PF12729 Four helix bundle sensory module for signal transduction CLJU_RS10845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS10845 PF00672 HAMP domain CLJU_RS10850 PF01584 CheW-like domain CLJU_RS10855 PF01627 Hpt domain CLJU_RS10855 PF07194 P2 response regulator binding domain CLJU_RS10855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS10855 PF01584 CheW-like domain CLJU_RS10855 PF02895 Signal transducing histidine kinase, homodimeric domain CLJU_RS10860 PF00072 Response regulator receiver domain CLJU_RS10865 PF03459 TOBE domain CLJU_RS10870 PF03459 TOBE domain CLJU_RS10870 PF00005 ABC transporter CLJU_RS10875 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS10885 PF05188 MutS domain II CLJU_RS10885 PF05192 MutS domain III CLJU_RS10885 PF01624 MutS domain I CLJU_RS10885 PF05190 MutS family domain IV CLJU_RS10885 PF00488 MutS domain V CLJU_RS10895 PF01297 Zinc-uptake complex component A periplasmic CLJU_RS10900 PF01808 AICARFT/IMPCHase bienzyme CLJU_RS10900 PF02142 MGS-like domain CLJU_RS10910 PF01891 Cobalt uptake substrate-specific transmembrane region CLJU_RS10955 PF00005 ABC transporter CLJU_RS11065 PF00005 ABC transporter CLJU_RS11065 PF00664 ABC transporter transmembrane region CLJU_RS11080 PF01554 MatE CLJU_RS11085 PF13847 Methyltransferase domain CLJU_RS11085 PF03551 Transcriptional regulator PadR-like family CLJU_RS11090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLJU_RS11100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLJU_RS11100 PF00005 ABC transporter CLJU_RS11105 PF00005 ABC transporter CLJU_RS11105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLJU_RS11110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLJU_RS11115 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS11115 PF12911 N-terminal TM domain of oligopeptide transport permease C CLJU_RS11120 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS11135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLJU_RS11135 PF00005 ABC transporter CLJU_RS11140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLJU_RS11140 PF00005 ABC transporter CLJU_RS11145 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS11145 PF12911 N-terminal TM domain of oligopeptide transport permease C CLJU_RS11150 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS11155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLJU_RS11160 PF00158 Sigma-54 interaction domain CLJU_RS11160 PF02954 Bacterial regulatory protein, Fis family CLJU_RS11160 PF13426 PAS domain CLJU_RS11165 PF01209 ubiE/COQ5 methyltransferase family CLJU_RS11195 PF06018 CodY GAF-like domain CLJU_RS11195 PF13556 PucR C-terminal helix-turn-helix domain CLJU_RS11195 PF17853 GGDEF-like domain CLJU_RS11200 PF04055 Radical SAM superfamily CLJU_RS11200 PF06968 Biotin and Thiamin Synthesis associated domain CLJU_RS11210 PF00936 BMC domain CLJU_RS11215 PF02910 Fumarate reductase flavoprotein C-term CLJU_RS11215 PF00890 FAD binding domain CLJU_RS11225 PF13085 2Fe-2S iron-sulfur cluster binding domain CLJU_RS11230 PF01047 MarR family CLJU_RS11235 PF02698 DUF218 domain CLJU_RS11255 PF02743 Cache domain CLJU_RS11255 PF00672 HAMP domain CLJU_RS11255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS11260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLJU_RS11270 PF12729 Four helix bundle sensory module for signal transduction CLJU_RS11270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS11270 PF00672 HAMP domain CLJU_RS11275 PF00005 ABC transporter CLJU_RS11290 PF00072 Response regulator receiver domain CLJU_RS11290 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS11295 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS11295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS11305 PF01751 Toprim domain CLJU_RS11305 PF01131 DNA topoisomerase CLJU_RS11310 PF00271 Helicase conserved C-terminal domain CLJU_RS11310 PF00270 DEAD/DEAH box helicase CLJU_RS11315 PF09370 Phosphoenolpyruvate hydrolase-like CLJU_RS11325 PF09370 Phosphoenolpyruvate hydrolase-like CLJU_RS11340 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CLJU_RS11345 PF02769 AIR synthase related protein, C-terminal domain CLJU_RS11345 PF00586 AIR synthase related protein, N-terminal domain CLJU_RS11350 PF01924 Hydrogenase formation hypA family CLJU_RS11360 PF01300 Telomere recombination CLJU_RS11360 PF07503 HypF finger CLJU_RS11360 PF17788 HypF Kae1-like domain CLJU_RS11360 PF00708 Acylphosphatase CLJU_RS11370 PF00148 Nitrogenase component 1 type Oxidoreductase CLJU_RS11375 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CLJU_RS11380 PF13536 Putative multidrug resistance efflux transporter CLJU_RS11385 PF01381 Helix-turn-helix CLJU_RS11385 PF07883 Cupin domain CLJU_RS11390 PF00857 Isochorismatase family CLJU_RS11410 PF02913 FAD linked oxidases, C-terminal domain CLJU_RS11410 PF01565 FAD binding domain CLJU_RS11415 PF06725 3D domain CLJU_RS11415 PF01476 LysM domain CLJU_RS11420 PF01546 Peptidase family M20/M25/M40 CLJU_RS11425 PF00107 Zinc-binding dehydrogenase CLJU_RS11425 PF08240 Alcohol dehydrogenase GroES-like domain CLJU_RS11430 PF00158 Sigma-54 interaction domain CLJU_RS11430 PF13426 PAS domain CLJU_RS11430 PF02954 Bacterial regulatory protein, Fis family CLJU_RS11435 PF00654 Voltage gated chloride channel CLJU_RS11440 PF00005 ABC transporter CLJU_RS11455 PF00873 AcrB/AcrD/AcrF family CLJU_RS11460 PF12802 MarR family CLJU_RS11465 PF00196 Bacterial regulatory proteins, luxR family CLJU_RS11465 PF17874 MalT-like TPR region CLJU_RS11480 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CLJU_RS11485 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CLJU_RS11500 PF00266 Aminotransferase class-V CLJU_RS11515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLJU_RS11515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLJU_RS11515 PF00205 Thiamine pyrophosphate enzyme, central domain CLJU_RS11520 PF13520 Amino acid permease CLJU_RS11525 PF13520 Amino acid permease CLJU_RS11535 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS11540 PF01131 DNA topoisomerase CLJU_RS11540 PF01751 Toprim domain CLJU_RS11545 PF02664 S-Ribosylhomocysteinase (LuxS) CLJU_RS11550 PF06962 Putative rRNA methylase CLJU_RS11560 PF00148 Nitrogenase component 1 type Oxidoreductase CLJU_RS11565 PF00148 Nitrogenase component 1 type Oxidoreductase CLJU_RS11570 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CLJU_RS11575 PF04055 Radical SAM superfamily CLJU_RS11575 PF02579 Dinitrogenase iron-molybdenum cofactor CLJU_RS11580 PF00438 S-adenosylmethionine synthetase, N-terminal domain CLJU_RS11580 PF02772 S-adenosylmethionine synthetase, central domain CLJU_RS11580 PF02773 S-adenosylmethionine synthetase, C-terminal domain CLJU_RS11585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLJU_RS11585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLJU_RS11590 PF00696 Amino acid kinase family CLJU_RS11595 PF00860 Permease family CLJU_RS11600 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLJU_RS11600 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CLJU_RS11605 PF00111 2Fe-2S iron-sulfur cluster binding domain CLJU_RS11605 PF01799 [2Fe-2S] binding domain CLJU_RS11610 PF00941 FAD binding domain in molybdopterin dehydrogenase CLJU_RS11610 PF03450 CO dehydrogenase flavoprotein C-terminal domain CLJU_RS11635 PF06545 Protein of unknown function (DUF1116) CLJU_RS11640 PF02629 CoA binding domain CLJU_RS11640 PF00549 CoA-ligase CLJU_RS11650 PF17853 GGDEF-like domain CLJU_RS11650 PF07905 Purine catabolism regulatory protein-like family CLJU_RS11650 PF13556 PucR C-terminal helix-turn-helix domain CLJU_RS11660 PF14759 Reductase C-terminal CLJU_RS11660 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS11665 PF13247 4Fe-4S dicluster domain CLJU_RS11670 PF00384 Molybdopterin oxidoreductase CLJU_RS11670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLJU_RS11670 PF01568 Molydopterin dinucleotide binding domain CLJU_RS11675 PF07690 Major Facilitator Superfamily CLJU_RS11685 PF00175 Oxidoreductase NAD-binding domain CLJU_RS11685 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLJU_RS11690 PF17179 4Fe-4S dicluster domain CLJU_RS11700 PF01979 Amidohydrolase family CLJU_RS11705 PF00696 Amino acid kinase family CLJU_RS11710 PF01546 Peptidase family M20/M25/M40 CLJU_RS11710 PF07687 Peptidase dimerisation domain CLJU_RS11715 PF01979 Amidohydrolase family CLJU_RS11720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLJU_RS11720 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS11725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLJU_RS11725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLJU_RS11730 PF00860 Permease family CLJU_RS11735 PF00291 Pyridoxal-phosphate dependent enzyme CLJU_RS11740 PF07969 Amidohydrolase family CLJU_RS11750 PF01799 [2Fe-2S] binding domain CLJU_RS11750 PF00111 2Fe-2S iron-sulfur cluster binding domain CLJU_RS11755 PF00111 2Fe-2S iron-sulfur cluster binding domain CLJU_RS11755 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CLJU_RS11755 PF01799 [2Fe-2S] binding domain CLJU_RS11755 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLJU_RS11760 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CLJU_RS11760 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLJU_RS11765 PF03479 Plants and Prokaryotes Conserved (PCC) domain CLJU_RS11765 PF00132 Bacterial transferase hexapeptide (six repeats) CLJU_RS11765 PF12804 MobA-like NTP transferase domain CLJU_RS11770 PF00440 Bacterial regulatory proteins, tetR family CLJU_RS11770 PF16925 Tetracyclin repressor-like, C-terminal domain CLJU_RS11775 PF01979 Amidohydrolase family CLJU_RS11775 PF13382 Adenine deaminase C-terminal domain CLJU_RS11780 PF00860 Permease family CLJU_RS11785 PF01979 Amidohydrolase family CLJU_RS11790 PF00158 Sigma-54 interaction domain CLJU_RS11790 PF13426 PAS domain CLJU_RS11790 PF02954 Bacterial regulatory protein, Fis family CLJU_RS11800 PF12804 MobA-like NTP transferase domain CLJU_RS11800 PF01066 CDP-alcohol phosphatidyltransferase CLJU_RS11805 PF02625 XdhC and CoxI family CLJU_RS11805 PF13478 XdhC Rossmann domain CLJU_RS11810 PF00501 AMP-binding enzyme CLJU_RS11810 PF14535 AMP-binding enzyme C-terminal domain CLJU_RS11830 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLJU_RS11830 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CLJU_RS11830 PF01799 [2Fe-2S] binding domain CLJU_RS11830 PF00111 2Fe-2S iron-sulfur cluster binding domain CLJU_RS11835 PF13426 PAS domain CLJU_RS11835 PF00158 Sigma-54 interaction domain CLJU_RS11835 PF02954 Bacterial regulatory protein, Fis family CLJU_RS11840 PF02625 XdhC and CoxI family CLJU_RS11840 PF13478 XdhC Rossmann domain CLJU_RS11845 PF06463 Molybdenum Cofactor Synthesis C CLJU_RS11845 PF04055 Radical SAM superfamily CLJU_RS11855 PF08241 Methyltransferase domain CLJU_RS11855 PF12697 Alpha/beta hydrolase family CLJU_RS11870 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CLJU_RS11870 PF00111 2Fe-2S iron-sulfur cluster binding domain CLJU_RS11870 PF01799 [2Fe-2S] binding domain CLJU_RS11870 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLJU_RS11875 PF02954 Bacterial regulatory protein, Fis family CLJU_RS11875 PF00158 Sigma-54 interaction domain CLJU_RS11875 PF13426 PAS domain CLJU_RS11880 PF02347 Glycine cleavage system P-protein CLJU_RS11885 PF02347 Glycine cleavage system P-protein CLJU_RS11890 PF01597 Glycine cleavage H-protein CLJU_RS11895 PF08669 Glycine cleavage T-protein C-terminal barrel domain CLJU_RS11895 PF01571 Aminomethyltransferase folate-binding domain CLJU_RS11900 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS11900 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLJU_RS11905 PF00694 Aconitase C-terminal domain CLJU_RS11905 PF00330 Aconitase family (aconitate hydratase) CLJU_RS11915 PF04198 Putative sugar-binding domain CLJU_RS11925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLJU_RS11925 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS11930 PF13520 Amino acid permease CLJU_RS11945 PF01638 HxlR-like helix-turn-helix CLJU_RS11965 PF13520 Amino acid permease CLJU_RS11970 PF04204 Homoserine O-succinyltransferase CLJU_RS11985 PF00324 Amino acid permease CLJU_RS11990 PF00291 Pyridoxal-phosphate dependent enzyme CLJU_RS11995 PF01053 Cys/Met metabolism PLP-dependent enzyme CLJU_RS12000 PF01209 ubiE/COQ5 methyltransferase family CLJU_RS12010 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CLJU_RS12010 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CLJU_RS12015 PF00890 FAD binding domain CLJU_RS12020 PF02445 Quinolinate synthetase A protein CLJU_RS12025 PF00672 HAMP domain CLJU_RS12025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS12025 PF17202 Single cache domain 3 CLJU_RS12040 PF02632 BioY family CLJU_RS12050 PF00186 Dihydrofolate reductase CLJU_RS12060 PF12801 4Fe-4S binding domain CLJU_RS12065 PF12791 Anti-sigma factor N-terminus CLJU_RS12065 PF00331 Glycosyl hydrolase family 10 CLJU_RS12070 PF04542 Sigma-70 region 2 CLJU_RS12075 PF08241 Methyltransferase domain CLJU_RS12100 PF12464 Maltose acetyltransferase CLJU_RS12100 PF14602 Hexapeptide repeat of succinyl-transferase CLJU_RS12120 PF04229 GrpB protein CLJU_RS12135 PF00679 Elongation factor G C-terminus CLJU_RS12135 PF14492 Elongation Factor G, domain II CLJU_RS12135 PF00009 Elongation factor Tu GTP binding domain CLJU_RS12135 PF03764 Elongation factor G, domain IV CLJU_RS12145 PF00005 ABC transporter CLJU_RS12150 PF00072 Response regulator receiver domain CLJU_RS12150 PF04397 LytTr DNA-binding domain CLJU_RS12160 PF01545 Cation efflux family CLJU_RS12160 PF16916 Dimerisation domain of Zinc Transporter CLJU_RS12180 PF00004 ATPase family associated with various cellular activities (AAA) CLJU_RS12180 PF17871 AAA lid domain CLJU_RS12180 PF07724 AAA domain (Cdc48 subfamily) CLJU_RS12180 PF02861 Clp amino terminal domain, pathogenicity island component CLJU_RS12180 PF10431 C-terminal, D2-small domain, of ClpB protein CLJU_RS12185 PF02617 ATP-dependent Clp protease adaptor protein ClpS CLJU_RS12200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS12200 PF00672 HAMP domain CLJU_RS12200 PF02743 Cache domain CLJU_RS12210 PF07690 Major Facilitator Superfamily CLJU_RS12215 PF13443 Cro/C1-type HTH DNA-binding domain CLJU_RS12235 PF03551 Transcriptional regulator PadR-like family CLJU_RS12240 PF13426 PAS domain CLJU_RS12240 PF02954 Bacterial regulatory protein, Fis family CLJU_RS12240 PF00158 Sigma-54 interaction domain CLJU_RS12245 PF08240 Alcohol dehydrogenase GroES-like domain CLJU_RS12245 PF00107 Zinc-binding dehydrogenase CLJU_RS12250 PF02954 Bacterial regulatory protein, Fis family CLJU_RS12250 PF00158 Sigma-54 interaction domain CLJU_RS12250 PF13426 PAS domain CLJU_RS12255 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS12260 PF00403 Heavy-metal-associated domain CLJU_RS12265 PF00403 Heavy-metal-associated domain CLJU_RS12270 PF02583 Metal-sensitive transcriptional repressor CLJU_RS12295 PF02645 Uncharacterised protein, DegV family COG1307 CLJU_RS12320 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLJU_RS12330 PF01594 AI-2E family transporter CLJU_RS12340 PF01967 MoaC family CLJU_RS12345 PF00994 Probable molybdopterin binding domain CLJU_RS12355 PF00884 Sulfatase CLJU_RS12360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS12360 PF00989 PAS fold CLJU_RS12360 PF18698 Histidine kinase sensor domain CLJU_RS12360 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS12360 PF00672 HAMP domain CLJU_RS12365 PF00072 Response regulator receiver domain CLJU_RS12365 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS12375 PF00005 ABC transporter CLJU_RS12380 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS12390 PF02525 Flavodoxin-like fold CLJU_RS12395 PF03965 Penicillinase repressor CLJU_RS12400 PF05569 BlaR1 peptidase M56 CLJU_RS12400 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS12415 PF00248 Aldo/keto reductase family CLJU_RS12420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLJU_RS12420 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLJU_RS12420 PF02142 MGS-like domain CLJU_RS12425 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CLJU_RS12425 PF00117 Glutamine amidotransferase class-I CLJU_RS12430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLJU_RS12430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLJU_RS12435 PF01557 Fumarylacetoacetate (FAA) hydrolase family CLJU_RS12445 PF00271 Helicase conserved C-terminal domain CLJU_RS12445 PF00570 HRDC domain CLJU_RS12445 PF00270 DEAD/DEAH box helicase CLJU_RS12445 PF16124 RecQ zinc-binding CLJU_RS12445 PF09382 RQC domain CLJU_RS12460 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CLJU_RS12460 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CLJU_RS12465 PF03390 2-hydroxycarboxylate transporter family CLJU_RS12475 PF04223 Citrate lyase, alpha subunit (CitF) CLJU_RS12480 PF03328 HpcH/HpaI aldolase/citrate lyase family CLJU_RS12485 PF06857 Malonate decarboxylase delta subunit (MdcD) CLJU_RS12490 PF08218 Citrate lyase ligase C-terminal domain CLJU_RS12495 PF03949 Malic enzyme, NAD binding domain CLJU_RS12495 PF00390 Malic enzyme, N-terminal domain CLJU_RS12500 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CLJU_RS12505 PF09084 NMT1/THI5 like CLJU_RS12510 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS12515 PF00005 ABC transporter CLJU_RS12520 PF03070 TENA/THI-4/PQQC family CLJU_RS12525 PF03073 TspO/MBR family CLJU_RS12530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS12530 PF03466 LysR substrate binding domain CLJU_RS12535 PF00384 Molybdopterin oxidoreductase CLJU_RS12535 PF01568 Molydopterin dinucleotide binding domain CLJU_RS12540 PF13247 4Fe-4S dicluster domain CLJU_RS12540 PF12800 4Fe-4S binding domain CLJU_RS12545 PF02613 Nitrate reductase delta subunit CLJU_RS12550 PF17179 4Fe-4S dicluster domain CLJU_RS12555 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLJU_RS12555 PF00175 Oxidoreductase NAD-binding domain CLJU_RS12560 PF08486 Stage II sporulation protein CLJU_RS12565 PF01842 ACT domain CLJU_RS12565 PF00800 Prephenate dehydratase CLJU_RS12565 PF01817 Chorismate mutase type II CLJU_RS12570 PF01047 MarR family CLJU_RS12595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS12595 PF17203 Single cache domain 3 CLJU_RS12595 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLJU_RS12595 PF00989 PAS fold CLJU_RS12600 PF13630 SdpI/YhfL protein family CLJU_RS12620 PF17934 Tetracyclin repressor-like, C-terminal domain CLJU_RS12620 PF00440 Bacterial regulatory proteins, tetR family CLJU_RS12630 PF13411 MerR HTH family regulatory protein CLJU_RS12640 PF03466 LysR substrate binding domain CLJU_RS12640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS12645 PF13426 PAS domain CLJU_RS12645 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS12645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS12645 PF00672 HAMP domain CLJU_RS12650 PF05139 Erythromycin esterase CLJU_RS12665 PF00005 ABC transporter CLJU_RS12670 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS12670 PF00072 Response regulator receiver domain CLJU_RS12680 PF17369 Family of unknown function (DUF5391) CLJU_RS12685 PF00072 Response regulator receiver domain CLJU_RS12685 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS12690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS12695 PF00005 ABC transporter CLJU_RS12700 PF02687 FtsX-like permease family CLJU_RS12705 PF00365 Phosphofructokinase CLJU_RS12715 PF08240 Alcohol dehydrogenase GroES-like domain CLJU_RS12715 PF00107 Zinc-binding dehydrogenase CLJU_RS12720 PF02780 Transketolase, C-terminal domain CLJU_RS12720 PF02779 Transketolase, pyrimidine binding domain CLJU_RS12725 PF00456 Transketolase, thiamine diphosphate binding domain CLJU_RS12730 PF08240 Alcohol dehydrogenase GroES-like domain CLJU_RS12730 PF00107 Zinc-binding dehydrogenase CLJU_RS12745 PF12833 Helix-turn-helix domain CLJU_RS12745 PF02311 AraC-like ligand binding domain CLJU_RS12755 PF00005 ABC transporter CLJU_RS12765 PF08281 Sigma-70, region 4 CLJU_RS12765 PF04542 Sigma-70 region 2 CLJU_RS12775 PF00805 Pentapeptide repeats (8 copies) CLJU_RS12780 PF00302 Chloramphenicol acetyltransferase CLJU_RS12785 PF02915 Rubrerythrin CLJU_RS12790 PF00923 Transaldolase/Fructose-6-phosphate aldolase CLJU_RS12795 PF04055 Radical SAM superfamily CLJU_RS12800 PF02901 Pyruvate formate lyase-like CLJU_RS12800 PF01228 Glycine radical CLJU_RS12830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLJU_RS12830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLJU_RS12835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLJU_RS12850 PF00455 DeoR C terminal sensor domain CLJU_RS12850 PF08220 DeoR-like helix-turn-helix domain CLJU_RS12855 PF00072 Response regulator receiver domain CLJU_RS12855 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS12865 PF01979 Amidohydrolase family CLJU_RS12870 PF01979 Amidohydrolase family CLJU_RS12870 PF13382 Adenine deaminase C-terminal domain CLJU_RS12875 PF13416 Bacterial extracellular solute-binding protein CLJU_RS12880 PF00005 ABC transporter CLJU_RS12880 PF08402 TOBE domain CLJU_RS12885 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS12890 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS12895 PF01212 Beta-eliminating lyase CLJU_RS12905 PF13977 BetI-type transcriptional repressor, C-terminal CLJU_RS12905 PF00440 Bacterial regulatory proteins, tetR family CLJU_RS12910 PF12706 Beta-lactamase superfamily domain CLJU_RS12915 PF01037 Lrp/AsnC ligand binding domain CLJU_RS12925 PF00664 ABC transporter transmembrane region CLJU_RS12925 PF00005 ABC transporter CLJU_RS12930 PF00664 ABC transporter transmembrane region CLJU_RS12930 PF00005 ABC transporter CLJU_RS12940 PF00455 DeoR C terminal sensor domain CLJU_RS12940 PF08220 DeoR-like helix-turn-helix domain CLJU_RS12945 PF08402 TOBE domain CLJU_RS12945 PF00005 ABC transporter CLJU_RS12950 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS12990 PF01638 HxlR-like helix-turn-helix CLJU_RS13005 PF01272 Transcription elongation factor, GreA/GreB, C-term CLJU_RS13005 PF03449 Transcription elongation factor, N-terminal CLJU_RS13010 PF00156 Phosphoribosyl transferase domain CLJU_RS13010 PF01738 Dienelactone hydrolase family CLJU_RS13045 PF03600 Citrate transporter CLJU_RS13055 PF04542 Sigma-70 region 2 CLJU_RS13055 PF08281 Sigma-70, region 4 CLJU_RS13065 PF00005 ABC transporter CLJU_RS13080 PF00483 Nucleotidyl transferase CLJU_RS13095 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS13100 PF00106 short chain dehydrogenase CLJU_RS13120 PF07690 Major Facilitator Superfamily CLJU_RS13130 PF00753 Metallo-beta-lactamase superfamily CLJU_RS13140 PF08279 HTH domain CLJU_RS13140 PF03099 Biotin/lipoate A/B protein ligase family CLJU_RS13140 PF02237 Biotin protein ligase C terminal domain CLJU_RS13145 PF01979 Amidohydrolase family CLJU_RS13155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS13165 PF02540 NAD synthase CLJU_RS13170 PF13537 Glutamine amidotransferase domain CLJU_RS13170 PF00733 Asparagine synthase CLJU_RS13175 PF01522 Polysaccharide deacetylase CLJU_RS13180 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CLJU_RS13180 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLJU_RS13185 PF02096 60Kd inner membrane protein CLJU_RS13185 PF14849 YidC periplasmic domain CLJU_RS13195 PF13411 MerR HTH family regulatory protein CLJU_RS13200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLJU_RS13205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLJU_RS13220 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS13220 PF07694 5TMR of 5TMR-LYT CLJU_RS13225 PF00589 Phage integrase family CLJU_RS13240 PF00005 ABC transporter CLJU_RS13260 PF01458 Uncharacterized protein family (UPF0051) CLJU_RS13265 PF00005 ABC transporter CLJU_RS13280 PF03551 Transcriptional regulator PadR-like family CLJU_RS13280 PF10400 Virulence activator alpha C-term CLJU_RS13285 PF01300 Telomere recombination CLJU_RS13285 PF03481 Putative GTP-binding controlling metal-binding CLJU_RS13290 PF04015 Domain of unknown function (DUF362) CLJU_RS13315 PF00589 Phage integrase family CLJU_RS13325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS13325 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS13330 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS13330 PF00072 Response regulator receiver domain CLJU_RS13340 PF00005 ABC transporter CLJU_RS13350 PF00488 MutS domain V CLJU_RS13350 PF05190 MutS family domain IV CLJU_RS13350 PF01624 MutS domain I CLJU_RS13350 PF05192 MutS domain III CLJU_RS13350 PF05188 MutS domain II CLJU_RS13360 PF01554 MatE CLJU_RS13365 PF01047 MarR family CLJU_RS13375 PF00005 ABC transporter CLJU_RS13395 PF00072 Response regulator receiver domain CLJU_RS13395 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS13400 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS13400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS13400 PF00672 HAMP domain CLJU_RS13405 PF00005 ABC transporter CLJU_RS13445 PF03063 Prismane/CO dehydrogenase family CLJU_RS13450 PF01593 Flavin containing amine oxidoreductase CLJU_RS13455 PF02504 Fatty acid synthesis protein CLJU_RS13460 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLJU_RS13465 PF04723 Glycine reductase complex selenoprotein A CLJU_RS13470 PF04723 Glycine reductase complex selenoprotein A CLJU_RS13475 PF00085 Thioredoxin CLJU_RS13480 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS13485 PF02028 BCCT, betaine/carnitine/choline family transporter CLJU_RS13490 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) CLJU_RS13495 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) CLJU_RS13500 PF09338 Glycine/sarcosine/betaine reductase component B subunits CLJU_RS13505 PF00795 Carbon-nitrogen hydrolase CLJU_RS13510 PF17151 Periplasmic sensor domain CLJU_RS13510 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS13520 PF01381 Helix-turn-helix CLJU_RS13535 PF12697 Alpha/beta hydrolase family CLJU_RS13590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS13590 PF00989 PAS fold CLJU_RS13590 PF17203 Single cache domain 3 CLJU_RS13590 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLJU_RS13635 PF00155 Aminotransferase class I and II CLJU_RS13640 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLJU_RS13645 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS13650 PF00005 ABC transporter CLJU_RS13655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLJU_RS13655 PF13378 Enolase C-terminal domain-like CLJU_RS13660 PF03180 NLPA lipoprotein CLJU_RS13665 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS13670 PF00005 ABC transporter CLJU_RS13670 PF09383 NIL domain CLJU_RS13675 PF00009 Elongation factor Tu GTP binding domain CLJU_RS13675 PF03144 Elongation factor Tu domain 2 CLJU_RS13675 PF09105 Elongation factor SelB, winged helix CLJU_RS13675 PF09107 Elongation factor SelB, winged helix CLJU_RS13675 PF09106 Elongation factor SelB, winged helix CLJU_RS13680 PF03841 L-seryl-tRNA selenium transferase CLJU_RS13680 PF12390 Selenocysteine synthase N terminal CLJU_RS13685 PF00586 AIR synthase related protein, N-terminal domain CLJU_RS13685 PF02769 AIR synthase related protein, C-terminal domain CLJU_RS13690 PF00266 Aminotransferase class-V CLJU_RS13695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS13695 PF03466 LysR substrate binding domain CLJU_RS13710 PF02504 Fatty acid synthesis protein CLJU_RS13715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLJU_RS13720 PF04723 Glycine reductase complex selenoprotein A CLJU_RS13725 PF04723 Glycine reductase complex selenoprotein A CLJU_RS13730 PF00085 Thioredoxin CLJU_RS13735 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS13740 PF02028 BCCT, betaine/carnitine/choline family transporter CLJU_RS13745 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) CLJU_RS13750 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) CLJU_RS13755 PF09338 Glycine/sarcosine/betaine reductase component B subunits CLJU_RS13760 PF00440 Bacterial regulatory proteins, tetR family CLJU_RS13765 PF03773 Predicted permease CLJU_RS13795 PF00881 Nitroreductase family CLJU_RS13805 PF00795 Carbon-nitrogen hydrolase CLJU_RS13810 PF05651 Putative sugar diacid recognition CLJU_RS13810 PF13556 PucR C-terminal helix-turn-helix domain CLJU_RS13810 PF17853 GGDEF-like domain CLJU_RS13825 PF13520 Amino acid permease CLJU_RS13830 PF00696 Amino acid kinase family CLJU_RS13835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLJU_RS13835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLJU_RS13840 PF02743 Cache domain CLJU_RS13840 PF00672 HAMP domain CLJU_RS13840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS13845 PF08664 YcbB domain CLJU_RS13845 PF00072 Response regulator receiver domain CLJU_RS13850 PF00324 Amino acid permease CLJU_RS13855 PF08664 YcbB domain CLJU_RS13855 PF00072 Response regulator receiver domain CLJU_RS13860 PF00672 HAMP domain CLJU_RS13860 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS13870 PF00704 Glycosyl hydrolases family 18 CLJU_RS13870 PF01476 LysM domain CLJU_RS13875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CLJU_RS13875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CLJU_RS13880 PF08666 SAF domain CLJU_RS13880 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CLJU_RS13885 PF02595 Glycerate kinase family CLJU_RS13890 PF07690 Major Facilitator Superfamily CLJU_RS13895 PF13378 Enolase C-terminal domain-like CLJU_RS13905 PF02447 GntP family permease CLJU_RS13910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLJU_RS13910 PF13378 Enolase C-terminal domain-like CLJU_RS13920 PF00939 Sodium:sulfate symporter transmembrane region CLJU_RS13925 PF17284 Spermidine synthase tetramerisation domain CLJU_RS13930 PF00248 Aldo/keto reductase family CLJU_RS13935 PF05651 Putative sugar diacid recognition CLJU_RS13935 PF17853 GGDEF-like domain CLJU_RS13935 PF13556 PucR C-terminal helix-turn-helix domain CLJU_RS13940 PF00701 Dihydrodipicolinate synthetase family CLJU_RS13960 PF00962 Adenosine/AMP deaminase CLJU_RS13965 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS13965 PF13426 PAS domain CLJU_RS13965 PF00563 EAL domain CLJU_RS13995 PF02568 Thiamine biosynthesis protein (ThiI) CLJU_RS13995 PF02926 THUMP domain CLJU_RS14000 PF00266 Aminotransferase class-V CLJU_RS14005 PF01522 Polysaccharide deacetylase CLJU_RS14020 PF00580 UvrD/REP helicase N-terminal domain CLJU_RS14020 PF13361 UvrD-like helicase C-terminal domain CLJU_RS14035 PF01595 Cyclin M transmembrane N-terminal domain CLJU_RS14035 PF00571 CBS domain CLJU_RS14035 PF03471 Transporter associated domain CLJU_RS14065 PF17203 Single cache domain 3 CLJU_RS14065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS14065 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLJU_RS14080 PF00575 S1 RNA binding domain CLJU_RS14085 PF03576 Peptidase family S58 CLJU_RS14090 PF12822 ECF transporter, substrate-specific component CLJU_RS14100 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLJU_RS14105 PF00005 ABC transporter CLJU_RS14120 PF04456 Protein of unknown function (DUF503) CLJU_RS14135 PF01750 Hydrogenase maturation protease CLJU_RS14140 PF00374 Nickel-dependent hydrogenase CLJU_RS14145 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CLJU_RS14145 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLJU_RS14150 PF07859 alpha/beta hydrolase fold CLJU_RS14160 PF07690 Major Facilitator Superfamily CLJU_RS14165 PF07690 Major Facilitator Superfamily CLJU_RS14170 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS14170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLJU_RS14180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLJU_RS14180 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS14185 PF08501 Shikimate dehydrogenase substrate binding domain CLJU_RS14185 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CLJU_RS14190 PF01487 Type I 3-dehydroquinase CLJU_RS14195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS14195 PF03466 LysR substrate binding domain CLJU_RS14215 PF00437 Type II/IV secretion system protein CLJU_RS14220 PF00072 Response regulator receiver domain CLJU_RS14220 PF00196 Bacterial regulatory proteins, luxR family CLJU_RS14245 PF00196 Bacterial regulatory proteins, luxR family CLJU_RS14245 PF00072 Response regulator receiver domain CLJU_RS14250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS14250 PF05384 Sensor protein DegS CLJU_RS14250 PF07730 Histidine kinase CLJU_RS14255 PF06750 Bacterial Peptidase A24 N-terminal domain CLJU_RS14255 PF01478 Type IV leader peptidase family CLJU_RS14265 PF02915 Rubrerythrin CLJU_RS14280 PF00005 ABC transporter CLJU_RS14285 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS14290 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLJU_RS14305 PF17099 Tryptophan transporter TrpP CLJU_RS14325 PF13091 PLD-like domain CLJU_RS14325 PF13396 Phospholipase_D-nuclease N-terminal CLJU_RS14330 PF06874 Firmicute fructose-1,6-bisphosphatase CLJU_RS14335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLJU_RS14335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLJU_RS14335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLJU_RS14335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLJU_RS14340 PF00403 Heavy-metal-associated domain CLJU_RS14360 PF01202 Shikimate kinase CLJU_RS14365 PF08501 Shikimate dehydrogenase substrate binding domain CLJU_RS14370 PF00800 Prephenate dehydratase CLJU_RS14370 PF01817 Chorismate mutase type II CLJU_RS14375 PF01264 Chorismate synthase CLJU_RS14380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLJU_RS14385 PF01761 3-dehydroquinate synthase CLJU_RS14390 PF01842 ACT domain CLJU_RS14390 PF02153 Prephenate dehydrogenase CLJU_RS14395 PF18152 DAHP synthase ferredoxin-like domain CLJU_RS14395 PF00793 DAHP synthetase I family CLJU_RS14405 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS14405 PF00072 Response regulator receiver domain CLJU_RS14415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS14415 PF02743 Cache domain CLJU_RS14415 PF00672 HAMP domain CLJU_RS14425 PF05167 Uncharacterised ACR (DUF711) CLJU_RS14430 PF01966 HD domain CLJU_RS14435 PF00672 HAMP domain CLJU_RS14435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS14435 PF16591 Helical bimodular sensor domain CLJU_RS14475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLJU_RS14475 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLJU_RS14475 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLJU_RS14475 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLJU_RS14475 PF10371 Domain of unknown function CLJU_RS14480 PF00295 Glycosyl hydrolases family 28 CLJU_RS14485 PF02463 RecF/RecN/SMC N terminal domain CLJU_RS14495 PF00155 Aminotransferase class I and II CLJU_RS14515 PF00155 Aminotransferase class I and II CLJU_RS14515 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS14520 PF01177 Asp/Glu/Hydantoin racemase CLJU_RS14525 PF07690 Major Facilitator Superfamily CLJU_RS14535 PF01043 SecA preprotein cross-linking domain CLJU_RS14535 PF02810 SEC-C motif CLJU_RS14535 PF07516 SecA Wing and Scaffold domain CLJU_RS14535 PF07517 SecA DEAD-like domain CLJU_RS14540 PF01925 Sulfite exporter TauE/SafE CLJU_RS14545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLJU_RS14545 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS14550 PF01795 MraW methylase family CLJU_RS14560 PF01022 Bacterial regulatory protein, arsR family CLJU_RS14575 PF01022 Bacterial regulatory protein, arsR family CLJU_RS14595 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS14595 PF00072 Response regulator receiver domain CLJU_RS14600 PF00989 PAS fold CLJU_RS14600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS14600 PF18698 Histidine kinase sensor domain CLJU_RS14600 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS14600 PF00672 HAMP domain CLJU_RS14610 PF12801 4Fe-4S binding domain CLJU_RS14620 PF01321 Creatinase/Prolidase N-terminal domain CLJU_RS14620 PF00557 Metallopeptidase family M24 CLJU_RS14630 PF02390 Putative methyltransferase CLJU_RS14640 PF02163 Peptidase family M50 CLJU_RS14650 PF12708 Pectate lyase superfamily protein CLJU_RS14650 PF09992 Phosphodiester glycosidase CLJU_RS14655 PF02562 PhoH-like protein CLJU_RS14655 PF13638 PIN domain CLJU_RS14660 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLJU_RS14690 PF00080 Copper/zinc superoxide dismutase (SODC) CLJU_RS14720 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLJU_RS14720 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS14725 PF10400 Virulence activator alpha C-term CLJU_RS14725 PF03551 Transcriptional regulator PadR-like family CLJU_RS14750 PF01979 Amidohydrolase family CLJU_RS14750 PF13382 Adenine deaminase C-terminal domain CLJU_RS14760 PF00941 FAD binding domain in molybdopterin dehydrogenase CLJU_RS14765 PF01799 [2Fe-2S] binding domain CLJU_RS14765 PF00111 2Fe-2S iron-sulfur cluster binding domain CLJU_RS14775 PF01546 Peptidase family M20/M25/M40 CLJU_RS14775 PF07687 Peptidase dimerisation domain CLJU_RS14780 PF07969 Amidohydrolase family CLJU_RS14785 PF02653 Branched-chain amino acid transport system / permease component CLJU_RS14790 PF02653 Branched-chain amino acid transport system / permease component CLJU_RS14795 PF00005 ABC transporter CLJU_RS14800 PF02608 ABC transporter substrate-binding protein PnrA-like CLJU_RS14805 PF13309 HTH domain CLJU_RS14805 PF08348 YheO-like PAS domain CLJU_RS14810 PF01471 Putative peptidoglycan binding domain CLJU_RS14810 PF01183 Glycosyl hydrolases family 25 CLJU_RS14815 PF01979 Amidohydrolase family CLJU_RS14820 PF00072 Response regulator receiver domain CLJU_RS14825 PF00672 HAMP domain CLJU_RS14825 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS14825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS14825 PF00072 Response regulator receiver domain CLJU_RS14825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CLJU_RS14825 PF01627 Hpt domain CLJU_RS14830 PF00072 Response regulator receiver domain CLJU_RS14835 PF00072 Response regulator receiver domain CLJU_RS14835 PF04397 LytTr DNA-binding domain CLJU_RS14855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLJU_RS14860 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS14860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS14865 PF00072 Response regulator receiver domain CLJU_RS14865 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS14870 PF02687 FtsX-like permease family CLJU_RS14875 PF00005 ABC transporter CLJU_RS14880 PF00580 UvrD/REP helicase N-terminal domain CLJU_RS14880 PF13361 UvrD-like helicase C-terminal domain CLJU_RS14895 PF00756 Putative esterase CLJU_RS14915 PF18089 DAPG hydrolase PhiG domain CLJU_RS14920 PF14537 Cytochrome c3 CLJU_RS14920 PF00890 FAD binding domain CLJU_RS14925 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLJU_RS14925 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLJU_RS14925 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS14945 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLJU_RS14950 PF00942 Cellulose binding domain CLJU_RS14950 PF03442 Carbohydrate binding domain X2 CLJU_RS14950 PF00963 Cohesin domain CLJU_RS14995 PF13426 PAS domain CLJU_RS14995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS14995 PF08447 PAS fold CLJU_RS15000 PF03466 LysR substrate binding domain CLJU_RS15000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS15015 PF02080 TrkA-C domain CLJU_RS15015 PF06826 Predicted Permease Membrane Region CLJU_RS15020 PF04303 PrpF protein CLJU_RS15025 PF00330 Aconitase family (aconitate hydratase) CLJU_RS15030 PF04223 Citrate lyase, alpha subunit (CitF) CLJU_RS15035 PF03328 HpcH/HpaI aldolase/citrate lyase family CLJU_RS15040 PF06857 Malonate decarboxylase delta subunit (MdcD) CLJU_RS15045 PF03949 Malic enzyme, NAD binding domain CLJU_RS15045 PF00390 Malic enzyme, N-terminal domain CLJU_RS15050 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS15050 PF07729 FCD domain CLJU_RS15060 PF01979 Amidohydrolase family CLJU_RS15065 PF00248 Aldo/keto reductase family CLJU_RS15075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS15075 PF00672 HAMP domain CLJU_RS15075 PF12729 Four helix bundle sensory module for signal transduction CLJU_RS15085 PF14268 YoaP-like CLJU_RS15085 PF00583 Acetyltransferase (GNAT) family CLJU_RS15090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS15095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLJU_RS15095 PF01842 ACT domain CLJU_RS15095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLJU_RS15100 PF04607 Region found in RelA / SpoT proteins CLJU_RS15105 PF00072 Response regulator receiver domain CLJU_RS15105 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS15110 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS15120 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS15120 PF03707 Bacterial signalling protein N terminal repeat CLJU_RS15120 PF00563 EAL domain CLJU_RS15130 PF00072 Response regulator receiver domain CLJU_RS15130 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS15135 PF00929 Exonuclease CLJU_RS15135 PF02811 PHP domain CLJU_RS15135 PF11490 DNA polymerase III polC-type N-terminus II CLJU_RS15135 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLJU_RS15135 PF14579 Helix-hairpin-helix motif CLJU_RS15135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLJU_RS15135 PF01336 OB-fold nucleic acid binding domain CLJU_RS15160 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS15165 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS15165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLJU_RS15175 PF05651 Putative sugar diacid recognition CLJU_RS15175 PF13556 PucR C-terminal helix-turn-helix domain CLJU_RS15175 PF17853 GGDEF-like domain CLJU_RS15195 PF00561 alpha/beta hydrolase fold CLJU_RS15195 PF08386 TAP-like protein CLJU_RS15220 PF07690 Major Facilitator Superfamily CLJU_RS15225 PF03466 LysR substrate binding domain CLJU_RS15225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS15230 PF02567 Phenazine biosynthesis-like protein CLJU_RS15235 PF12671 Putative amidase domain CLJU_RS15270 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLJU_RS15275 PF00072 Response regulator receiver domain CLJU_RS15275 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS15285 PF00893 Small Multidrug Resistance protein CLJU_RS15305 PF01548 Transposase CLJU_RS15305 PF02371 Transposase IS116/IS110/IS902 family CLJU_RS15485 PF03592 Terminase small subunit CLJU_RS15485 PF10668 Phage terminase small subunit CLJU_RS15495 PF01336 OB-fold nucleic acid binding domain CLJU_RS15495 PF00152 tRNA synthetases class II (D, K and N) CLJU_RS15495 PF13619 KTSC domain CLJU_RS15510 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CLJU_RS15515 PF02368 Bacterial Ig-like domain (group 2) CLJU_RS15640 PF01381 Helix-turn-helix CLJU_RS15650 PF14659 Phage integrase, N-terminal SAM-like domain CLJU_RS15650 PF00589 Phage integrase family CLJU_RS15665 PF00005 ABC transporter CLJU_RS15670 PF00950 ABC 3 transport family CLJU_RS15680 PF12557 Cob(I)alamin adenosyltransferase N terminal CLJU_RS15680 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CLJU_RS15690 PF02571 Precorrin-6x reductase CbiJ/CobK CLJU_RS15695 PF06180 Cobalt chelatase (CbiK) CLJU_RS15700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLJU_RS15705 PF01890 Cobalamin synthesis G C-terminus CLJU_RS15705 PF11760 Cobalamin synthesis G N-terminal CLJU_RS15705 PF11761 Cobalamin biosynthesis central region CLJU_RS15710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLJU_RS15715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLJU_RS15720 PF05175 Methyltransferase small domain CLJU_RS15730 PF01888 CbiD CLJU_RS15735 PF02570 Precorrin-8X methylmutase CLJU_RS15740 PF02277 Phosphoribosyltransferase CLJU_RS15745 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLJU_RS15745 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLJU_RS15750 PF00490 Delta-aminolevulinic acid dehydratase CLJU_RS15755 PF02602 Uroporphyrinogen-III synthase HemD CLJU_RS15755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLJU_RS15760 PF03900 Porphobilinogen deaminase, C-terminal domain CLJU_RS15760 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CLJU_RS15770 PF00155 Aminotransferase class I and II CLJU_RS15775 PF03186 CobD/Cbib protein CLJU_RS15780 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLJU_RS15785 PF00005 ABC transporter CLJU_RS15800 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS15800 PF00155 Aminotransferase class I and II CLJU_RS15805 PF01061 ABC-2 type transporter CLJU_RS15810 PF01061 ABC-2 type transporter CLJU_RS15820 PF03180 NLPA lipoprotein CLJU_RS15825 PF07478 D-ala D-ala ligase C-terminus CLJU_RS15825 PF01820 D-ala D-ala ligase N-terminus CLJU_RS15830 PF01168 Alanine racemase, N-terminal domain CLJU_RS15830 PF00842 Alanine racemase, C-terminal domain CLJU_RS15840 PF02583 Metal-sensitive transcriptional repressor CLJU_RS15845 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CLJU_RS15845 PF00753 Metallo-beta-lactamase superfamily CLJU_RS15845 PF10996 Beta-Casp domain CLJU_RS15850 PF12671 Putative amidase domain CLJU_RS15865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLJU_RS15865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLJU_RS15885 PF07690 Major Facilitator Superfamily CLJU_RS15890 PF01569 PAP2 superfamily CLJU_RS15895 PF01638 HxlR-like helix-turn-helix CLJU_RS16000 PF14659 Phage integrase, N-terminal SAM-like domain CLJU_RS16000 PF00589 Phage integrase family CLJU_RS16055 PF07486 Cell Wall Hydrolase CLJU_RS16055 PF01471 Putative peptidoglycan binding domain CLJU_RS16140 PF08331 Domain of unknown function (DUF1730) CLJU_RS16160 PF07690 Major Facilitator Superfamily CLJU_RS16170 PF01381 Helix-turn-helix CLJU_RS16175 PF11208 Protein of unknown function (DUF2992) CLJU_RS16185 PF00221 Aromatic amino acid lyase CLJU_RS16200 PF00474 Sodium:solute symporter family CLJU_RS16205 PF02954 Bacterial regulatory protein, Fis family CLJU_RS16205 PF13426 PAS domain CLJU_RS16205 PF00158 Sigma-54 interaction domain CLJU_RS16210 PF00696 Amino acid kinase family CLJU_RS16210 PF13840 ACT domain CLJU_RS16230 PF03551 Transcriptional regulator PadR-like family CLJU_RS16235 PF00574 Clp protease CLJU_RS16240 PF12833 Helix-turn-helix domain CLJU_RS16245 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS16245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS16250 PF00072 Response regulator receiver domain CLJU_RS16250 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS16270 PF00005 ABC transporter CLJU_RS16275 PF04055 Radical SAM superfamily CLJU_RS16285 PF08543 Phosphomethylpyrimidine kinase CLJU_RS16290 PF02110 Hydroxyethylthiazole kinase family CLJU_RS16295 PF02581 Thiamine monophosphate synthase CLJU_RS16300 PF00293 NUDIX domain CLJU_RS16300 PF13344 Haloacid dehalogenase-like hydrolase CLJU_RS16305 PF04172 LrgB-like family CLJU_RS16310 PF03788 LrgA family CLJU_RS16315 PF01554 MatE CLJU_RS16325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS16330 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLJU_RS16335 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS16340 PF12729 Four helix bundle sensory module for signal transduction CLJU_RS16340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS16340 PF00672 HAMP domain CLJU_RS16345 PF13361 UvrD-like helicase C-terminal domain CLJU_RS16345 PF12705 PD-(D/E)XK nuclease superfamily CLJU_RS16345 PF00580 UvrD/REP helicase N-terminal domain CLJU_RS16350 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS16355 PF00291 Pyridoxal-phosphate dependent enzyme CLJU_RS16355 PF14821 Threonine synthase N terminus CLJU_RS16360 PF00266 Aminotransferase class-V CLJU_RS16365 PF01891 Cobalt uptake substrate-specific transmembrane region CLJU_RS16365 PF13190 PDGLE domain CLJU_RS16370 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CLJU_RS16370 PF04055 Radical SAM superfamily CLJU_RS16375 PF03099 Biotin/lipoate A/B protein ligase family CLJU_RS16375 PF10437 Bacterial lipoate protein ligase C-terminus CLJU_RS16385 PF00313 'Cold-shock' DNA-binding domain CLJU_RS16390 PF03313 Serine dehydratase alpha chain CLJU_RS16395 PF01842 ACT domain CLJU_RS16395 PF03315 Serine dehydratase beta chain CLJU_RS16400 PF00155 Aminotransferase class I and II CLJU_RS16405 PF00266 Aminotransferase class-V CLJU_RS16415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS16415 PF03466 LysR substrate binding domain CLJU_RS16430 PF01061 ABC-2 type transporter CLJU_RS16455 PF04055 Radical SAM superfamily CLJU_RS16455 PF06463 Molybdenum Cofactor Synthesis C CLJU_RS16475 PF05067 Manganese containing catalase CLJU_RS16480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLJU_RS16480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLJU_RS16500 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS16500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLJU_RS16505 PF02743 Cache domain CLJU_RS16505 PF00672 HAMP domain CLJU_RS16505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS16510 PF04294 VanW like protein CLJU_RS16520 PF00535 Glycosyl transferase family 2 CLJU_RS16525 PF03275 UDP-galactopyranose mutase CLJU_RS16540 PF01266 FAD dependent oxidoreductase CLJU_RS16540 PF00355 Rieske [2Fe-2S] domain CLJU_RS16545 PF07859 alpha/beta hydrolase fold CLJU_RS16560 PF01121 Dephospho-CoA kinase CLJU_RS16565 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLJU_RS16565 PF00476 DNA polymerase family A CLJU_RS16565 PF01367 5'-3' exonuclease, C-terminal SAM fold CLJU_RS16580 PF03006 Haemolysin-III related CLJU_RS16590 PF00152 tRNA synthetases class II (D, K and N) CLJU_RS16590 PF02938 GAD domain CLJU_RS16590 PF01336 OB-fold nucleic acid binding domain CLJU_RS16595 PF13393 Histidyl-tRNA synthetase CLJU_RS16595 PF03129 Anticodon binding domain CLJU_RS16600 PF04055 Radical SAM superfamily CLJU_RS16605 PF00753 Metallo-beta-lactamase superfamily CLJU_RS16610 PF02580 D-Tyr-tRNA(Tyr) deacylase CLJU_RS16615 PF13291 ACT domain CLJU_RS16615 PF04607 Region found in RelA / SpoT proteins CLJU_RS16615 PF02824 TGS domain CLJU_RS16620 PF00156 Phosphoribosyl transferase domain CLJU_RS16630 PF02355 Protein export membrane protein CLJU_RS16630 PF07549 SecD/SecF GG Motif CLJU_RS16635 PF02355 Protein export membrane protein CLJU_RS16635 PF07549 SecD/SecF GG Motif CLJU_RS16655 PF02699 Preprotein translocase subunit CLJU_RS16660 PF01702 Queuine tRNA-ribosyltransferase CLJU_RS16665 PF02547 Queuosine biosynthesis protein CLJU_RS16670 PF05496 Holliday junction DNA helicase RuvB P-loop domain CLJU_RS16670 PF05491 RuvB C-terminal winged helix domain CLJU_RS16670 PF17864 RuvB AAA lid domain CLJU_RS16675 PF01330 RuvA N terminal domain CLJU_RS16675 PF07499 RuvA, C-terminal domain CLJU_RS16690 PF02618 YceG-like family CLJU_RS16695 PF01709 Transcriptional regulator CLJU_RS16700 PF01205 Uncharacterized protein family UPF0029 CLJU_RS16700 PF09186 Domain of unknown function (DUF1949) CLJU_RS16705 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS16705 PF00155 Aminotransferase class I and II CLJU_RS16715 PF16360 GTP-binding GTPase Middle Region CLJU_RS16715 PF01926 50S ribosome-binding GTPase CLJU_RS16715 PF13167 GTP-binding GTPase N-terminal CLJU_RS16720 PF00156 Phosphoribosyl transferase domain CLJU_RS16730 PF00912 Transglycosylase CLJU_RS16730 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS16735 PF04539 Sigma-70 region 3 CLJU_RS16735 PF04545 Sigma-70, region 4 CLJU_RS16735 PF04542 Sigma-70 region 2 CLJU_RS16740 PF13581 Histidine kinase-like ATPase domain CLJU_RS16745 PF01740 STAS domain CLJU_RS16750 PF07669 Eco57I restriction-modification methylase CLJU_RS16755 PF01522 Polysaccharide deacetylase CLJU_RS16760 PF02082 Transcriptional regulator CLJU_RS16765 PF03808 Glycosyl transferase WecB/TagA/CpsF family CLJU_RS16770 PF02397 Bacterial sugar transferase CLJU_RS16775 PF01757 Acyltransferase family CLJU_RS16780 PF03023 Lipid II flippase MurJ CLJU_RS16785 PF00534 Glycosyl transferases group 1 CLJU_RS16785 PF13439 Glycosyltransferase Family 4 CLJU_RS16795 PF02350 UDP-N-acetylglucosamine 2-epimerase CLJU_RS16805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLJU_RS16805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLJU_RS16810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CLJU_RS16810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CLJU_RS16810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CLJU_RS16820 PF03023 Lipid II flippase MurJ CLJU_RS16835 PF00535 Glycosyl transferase family 2 CLJU_RS16835 PF01501 Glycosyl transferase family 8 CLJU_RS16845 PF00534 Glycosyl transferases group 1 CLJU_RS16845 PF13439 Glycosyltransferase Family 4 CLJU_RS16850 PF02719 Polysaccharide biosynthesis protein CLJU_RS16855 PF00483 Nucleotidyl transferase CLJU_RS16865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLJU_RS16865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLJU_RS16865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLJU_RS16865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLJU_RS16870 PF01276 Orn/Lys/Arg decarboxylase, major domain CLJU_RS16870 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLJU_RS16890 PF03551 Transcriptional regulator PadR-like family CLJU_RS16910 PF00579 tRNA synthetases class I (W and Y) CLJU_RS16910 PF01479 S4 domain CLJU_RS16925 PF03551 Transcriptional regulator PadR-like family CLJU_RS16930 PF01566 Natural resistance-associated macrophage protein CLJU_RS16935 PF01325 Iron dependent repressor, N-terminal DNA binding domain CLJU_RS16935 PF02742 Iron dependent repressor, metal binding and dimerisation domain CLJU_RS16940 PF01070 FMN-dependent dehydrogenase CLJU_RS16945 PF04463 Protein of unknown function (DUF523) CLJU_RS16950 PF00488 MutS domain V CLJU_RS16950 PF01713 Smr domain CLJU_RS16955 PF12392 Collagenase CLJU_RS16955 PF01136 Peptidase family U32 CLJU_RS16960 PF05164 Cell division protein ZapA CLJU_RS16965 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CLJU_RS16965 PF01588 Putative tRNA binding domain CLJU_RS16965 PF03483 B3/4 domain CLJU_RS16965 PF03484 tRNA synthetase B5 domain CLJU_RS16965 PF03147 Ferredoxin-fold anticodon binding domain CLJU_RS16970 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CLJU_RS16970 PF01409 tRNA synthetases class II core domain (F) CLJU_RS16975 PF00588 SpoU rRNA Methylase family CLJU_RS16975 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLJU_RS16980 PF00453 Ribosomal protein L20 CLJU_RS16985 PF01632 Ribosomal protein L35 CLJU_RS16990 PF00707 Translation initiation factor IF-3, C-terminal domain CLJU_RS16990 PF05198 Translation initiation factor IF-3, N-terminal domain CLJU_RS16995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLJU_RS16995 PF02824 TGS domain CLJU_RS16995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLJU_RS16995 PF03129 Anticodon binding domain CLJU_RS17030 PF00155 Aminotransferase class I and II CLJU_RS17035 PF01113 Dihydrodipicolinate reductase, N-terminus CLJU_RS17035 PF05173 Dihydrodipicolinate reductase, C-terminus CLJU_RS17040 PF00701 Dihydrodipicolinate synthetase family CLJU_RS17045 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLJU_RS17045 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLJU_RS17055 PF13649 Methyltransferase domain CLJU_RS17060 PF01430 Hsp33 protein CLJU_RS17065 PF14602 Hexapeptide repeat of succinyl-transferase CLJU_RS17065 PF00132 Bacterial transferase hexapeptide (six repeats) CLJU_RS17065 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CLJU_RS17080 PF01522 Polysaccharide deacetylase CLJU_RS17100 PF02875 Mur ligase family, glutamate ligase domain CLJU_RS17100 PF08245 Mur ligase middle domain CLJU_RS17105 PF10458 Valyl tRNA synthetase tRNA binding arm CLJU_RS17105 PF00133 tRNA synthetases class I (I, L, M and V) CLJU_RS17105 PF08264 Anticodon-binding domain of tRNA CLJU_RS17130 PF01975 Survival protein SurE CLJU_RS17135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS17135 PF03466 LysR substrate binding domain CLJU_RS17140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLJU_RS17140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLJU_RS17145 PF03737 Aldolase/RraA CLJU_RS17150 PF07690 Major Facilitator Superfamily CLJU_RS17155 PF01979 Amidohydrolase family CLJU_RS17175 PF02653 Branched-chain amino acid transport system / permease component CLJU_RS17180 PF02653 Branched-chain amino acid transport system / permease component CLJU_RS17185 PF00005 ABC transporter CLJU_RS17190 PF13407 Periplasmic binding protein domain CLJU_RS17195 PF01066 CDP-alcohol phosphatidyltransferase CLJU_RS17215 PF13171 Protein of unknown function (DUF4004) CLJU_RS17230 PF12706 Beta-lactamase superfamily domain CLJU_RS17255 PF02311 AraC-like ligand binding domain CLJU_RS17255 PF12833 Helix-turn-helix domain CLJU_RS17260 PF07690 Major Facilitator Superfamily CLJU_RS17275 PF02110 Hydroxyethylthiazole kinase family CLJU_RS17320 PF01965 DJ-1/PfpI family CLJU_RS17330 PF04397 LytTr DNA-binding domain CLJU_RS17330 PF00072 Response regulator receiver domain CLJU_RS17340 PF00005 ABC transporter CLJU_RS17360 PF11954 Domain of unknown function (DUF3471) CLJU_RS17360 PF00144 Beta-lactamase CLJU_RS17365 PF00881 Nitroreductase family CLJU_RS17385 PF00005 ABC transporter CLJU_RS17390 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS17405 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLJU_RS17410 PF00005 ABC transporter CLJU_RS17415 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS17435 PF02631 RecX family CLJU_RS17440 PF00675 Insulinase (Peptidase family M16) CLJU_RS17440 PF05193 Peptidase M16 inactive domain CLJU_RS17445 PF00271 Helicase conserved C-terminal domain CLJU_RS17445 PF00270 DEAD/DEAH box helicase CLJU_RS17455 PF01272 Transcription elongation factor, GreA/GreB, C-term CLJU_RS17455 PF03449 Transcription elongation factor, N-terminal CLJU_RS17460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLJU_RS17460 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CLJU_RS17465 PF01255 Putative undecaprenyl diphosphate synthase CLJU_RS17470 PF01545 Cation efflux family CLJU_RS17470 PF16916 Dimerisation domain of Zinc Transporter CLJU_RS17485 PF02424 ApbE family CLJU_RS17490 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CLJU_RS17495 PF02654 Cobalamin-5-phosphate synthase CLJU_RS17500 PF00300 Histidine phosphatase superfamily (branch 1) CLJU_RS17505 PF01475 Ferric uptake regulator family CLJU_RS17520 PF13280 WYL domain CLJU_RS17520 PF08279 HTH domain CLJU_RS17530 PF02517 CPBP intramembrane metalloprotease CLJU_RS17535 PF01926 50S ribosome-binding GTPase CLJU_RS17540 PF02190 ATP-dependent protease La (LON) substrate-binding domain CLJU_RS17540 PF00004 ATPase family associated with various cellular activities (AAA) CLJU_RS17540 PF05362 Lon protease (S16) C-terminal proteolytic domain CLJU_RS17545 PF07724 AAA domain (Cdc48 subfamily) CLJU_RS17545 PF06689 ClpX C4-type zinc finger CLJU_RS17545 PF10431 C-terminal, D2-small domain, of ClpB protein CLJU_RS17550 PF00574 Clp protease CLJU_RS17555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLJU_RS17555 PF05697 Bacterial trigger factor protein (TF) CLJU_RS17555 PF05698 Bacterial trigger factor protein (TF) C-terminus CLJU_RS17570 PF00156 Phosphoribosyl transferase domain CLJU_RS17575 PF01180 Dihydroorotate dehydrogenase CLJU_RS17580 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLJU_RS17585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CLJU_RS17590 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CLJU_RS17590 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CLJU_RS17595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLJU_RS17595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLJU_RS17600 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLJU_RS17610 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CLJU_RS17615 PF07690 Major Facilitator Superfamily CLJU_RS17620 PF00557 Metallopeptidase family M24 CLJU_RS17625 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CLJU_RS17625 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLJU_RS17640 PF01566 Natural resistance-associated macrophage protein CLJU_RS17650 PF01180 Dihydroorotate dehydrogenase CLJU_RS17660 PF00449 Urease alpha-subunit, N-terminal domain CLJU_RS17660 PF01979 Amidohydrolase family CLJU_RS17665 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CLJU_RS17670 PF01546 Peptidase family M20/M25/M40 CLJU_RS17670 PF07687 Peptidase dimerisation domain CLJU_RS17675 PF00202 Aminotransferase class-III CLJU_RS17680 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS17685 PF17853 GGDEF-like domain CLJU_RS17685 PF13556 PucR C-terminal helix-turn-helix domain CLJU_RS17690 PF03323 Bacillus/Clostridium GerA spore germination protein CLJU_RS17695 PF05504 Spore germination B3/ GerAC like, C-terminal CLJU_RS17705 PF03845 Spore germination protein CLJU_RS17710 PF01063 Amino-transferase class IV CLJU_RS17715 PF04715 Anthranilate synthase component I, N terminal region CLJU_RS17715 PF00425 chorismate binding enzyme CLJU_RS17720 PF00117 Glutamine amidotransferase class-I CLJU_RS17725 PF02627 Carboxymuconolactone decarboxylase family CLJU_RS17755 PF01814 Hemerythrin HHE cation binding domain CLJU_RS17765 PF00149 Calcineurin-like phosphoesterase CLJU_RS17780 PF03061 Thioesterase superfamily CLJU_RS17790 PF02417 Chromate transporter CLJU_RS17810 PF00672 HAMP domain CLJU_RS17810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS17810 PF12729 Four helix bundle sensory module for signal transduction CLJU_RS17815 PF01996 F420-0:Gamma-glutamyl ligase CLJU_RS17815 PF00881 Nitroreductase family CLJU_RS17825 PF00533 BRCA1 C Terminus (BRCT) domain CLJU_RS17825 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CLJU_RS17825 PF01653 NAD-dependent DNA ligase adenylation domain CLJU_RS17825 PF03120 NAD-dependent DNA ligase OB-fold domain CLJU_RS17825 PF12826 Helix-hairpin-helix motif CLJU_RS17840 PF01209 ubiE/COQ5 methyltransferase family CLJU_RS17850 PF00158 Sigma-54 interaction domain CLJU_RS17850 PF13426 PAS domain CLJU_RS17850 PF02954 Bacterial regulatory protein, Fis family CLJU_RS17985 PF01612 3'-5' exonuclease CLJU_RS17985 PF00476 DNA polymerase family A CLJU_RS17985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLJU_RS17985 PF01367 5'-3' exonuclease, C-terminal SAM fold CLJU_RS18020 PF04539 Sigma-70 region 3 CLJU_RS18020 PF04542 Sigma-70 region 2 CLJU_RS18020 PF04545 Sigma-70, region 4 CLJU_RS18040 PF01381 Helix-turn-helix CLJU_RS18055 PF00589 Phage integrase family CLJU_RS18055 PF14659 Phage integrase, N-terminal SAM-like domain CLJU_RS18140 PF01725 Ham1 family CLJU_RS18145 PF01138 3' exoribonuclease family, domain 1 CLJU_RS18145 PF03725 3' exoribonuclease family, domain 2 CLJU_RS18165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLJU_RS18175 PF02637 GatB domain CLJU_RS18175 PF02934 GatB/GatE catalytic domain CLJU_RS18180 PF01425 Amidase CLJU_RS18185 PF02686 Glu-tRNAGln amidotransferase C subunit CLJU_RS18190 PF07722 Peptidase C26 CLJU_RS18195 PF02954 Bacterial regulatory protein, Fis family CLJU_RS18195 PF00158 Sigma-54 interaction domain CLJU_RS18195 PF13426 PAS domain CLJU_RS18205 PF00533 BRCA1 C Terminus (BRCT) domain CLJU_RS18205 PF01653 NAD-dependent DNA ligase adenylation domain CLJU_RS18205 PF03120 NAD-dependent DNA ligase OB-fold domain CLJU_RS18205 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CLJU_RS18205 PF12826 Helix-hairpin-helix motif CLJU_RS18210 PF00580 UvrD/REP helicase N-terminal domain CLJU_RS18210 PF13361 UvrD-like helicase C-terminal domain CLJU_RS18215 PF01371 Trp repressor protein CLJU_RS18220 PF01479 S4 domain CLJU_RS18220 PF00849 RNA pseudouridylate synthase CLJU_RS18225 PF01464 Transglycosylase SLT domain CLJU_RS18235 PF00893 Small Multidrug Resistance protein CLJU_RS18255 PF02371 Transposase IS116/IS110/IS902 family CLJU_RS18255 PF01548 Transposase CLJU_RS18265 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CLJU_RS18280 PF01638 HxlR-like helix-turn-helix CLJU_RS18285 PF00342 Phosphoglucose isomerase CLJU_RS18290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS18300 PF00958 GMP synthase C terminal domain CLJU_RS18300 PF00117 Glutamine amidotransferase class-I CLJU_RS18305 PF00478 IMP dehydrogenase / GMP reductase domain CLJU_RS18305 PF00571 CBS domain CLJU_RS18310 PF00118 TCP-1/cpn60 chaperonin family CLJU_RS18315 PF00166 Chaperonin 10 Kd subunit CLJU_RS18320 PF09335 SNARE associated Golgi protein CLJU_RS18335 PF00175 Oxidoreductase NAD-binding domain CLJU_RS18335 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLJU_RS18340 PF02629 CoA binding domain CLJU_RS18340 PF06971 Putative DNA-binding protein N-terminus CLJU_RS18345 PF00005 ABC transporter CLJU_RS18345 PF12848 ABC transporter CLJU_RS18345 PF16326 ABC transporter C-terminal domain CLJU_RS18355 PF00005 ABC transporter CLJU_RS18360 PF01979 Amidohydrolase family CLJU_RS18365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLJU_RS18365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLJU_RS18370 PF01910 Thiamine-binding protein CLJU_RS18375 PF00072 Response regulator receiver domain CLJU_RS18375 PF04397 LytTr DNA-binding domain CLJU_RS18380 PF07694 5TMR of 5TMR-LYT CLJU_RS18380 PF13492 GAF domain CLJU_RS18380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS18380 PF06580 Histidine kinase CLJU_RS18385 PF13722 5TM C-terminal transporter carbon starvation CstA CLJU_RS18385 PF02554 Carbon starvation protein CstA CLJU_RS18390 PF02554 Carbon starvation protein CstA CLJU_RS18390 PF13722 5TM C-terminal transporter carbon starvation CstA CLJU_RS18395 PF05193 Peptidase M16 inactive domain CLJU_RS18395 PF00675 Insulinase (Peptidase family M16) CLJU_RS18395 PF08367 Peptidase M16C associated CLJU_RS18400 PF01734 Patatin-like phospholipase CLJU_RS18405 PF03807 NADP oxidoreductase coenzyme F420-dependent CLJU_RS18405 PF14748 Pyrroline-5-carboxylate reductase dimerisation CLJU_RS18410 PF02436 Conserved carboxylase domain CLJU_RS18410 PF00682 HMGL-like CLJU_RS18410 PF00289 Biotin carboxylase, N-terminal domain CLJU_RS18410 PF00364 Biotin-requiring enzyme CLJU_RS18410 PF02785 Biotin carboxylase C-terminal domain CLJU_RS18410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLJU_RS18415 PF00814 Glycoprotease family CLJU_RS18420 PF00005 ABC transporter CLJU_RS18435 PF05866 Endodeoxyribonuclease RusA CLJU_RS18450 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS18450 PF04324 BFD-like [2Fe-2S] binding domain CLJU_RS18455 PF01266 FAD dependent oxidoreductase CLJU_RS18460 PF01226 Formate/nitrite transporter CLJU_RS18480 PF00111 2Fe-2S iron-sulfur cluster binding domain CLJU_RS18480 PF00175 Oxidoreductase NAD-binding domain CLJU_RS18480 PF00970 Oxidoreductase FAD-binding domain CLJU_RS18485 PF01597 Glycine cleavage H-protein CLJU_RS18490 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain CLJU_RS18490 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit CLJU_RS18495 PF00809 Pterin binding enzyme CLJU_RS18500 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit CLJU_RS18500 PF04060 Putative Fe-S cluster CLJU_RS18505 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit CLJU_RS18515 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS18515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLJU_RS18530 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLJU_RS18530 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLJU_RS18535 PF04961 Formiminotransferase-cyclodeaminase CLJU_RS18540 PF01268 Formate--tetrahydrofolate ligase CLJU_RS18545 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLJU_RS18550 PF03063 Prismane/CO dehydrogenase family CLJU_RS18565 PF02001 Protein of unknown function DUF134 CLJU_RS18570 PF01475 Ferric uptake regulator family CLJU_RS18580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLJU_RS18585 PF10609 NUBPL iron-transfer P-loop NTPase CLJU_RS18595 PF01638 HxlR-like helix-turn-helix CLJU_RS18605 PF10609 NUBPL iron-transfer P-loop NTPase CLJU_RS18615 PF03466 LysR substrate binding domain CLJU_RS18615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS18620 PF03601 Conserved hypothetical protein 698 CLJU_RS18625 PF01613 Flavin reductase like domain CLJU_RS18630 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLJU_RS18635 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CLJU_RS18640 PF01613 Flavin reductase like domain CLJU_RS18650 PF03773 Predicted permease CLJU_RS18655 PF01297 Zinc-uptake complex component A periplasmic CLJU_RS18660 PF03773 Predicted permease CLJU_RS18670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS18670 PF03466 LysR substrate binding domain CLJU_RS18675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLJU_RS18675 PF13187 4Fe-4S dicluster domain CLJU_RS18675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLJU_RS18680 PF01458 Uncharacterized protein family (UPF0051) CLJU_RS18685 PF00005 ABC transporter CLJU_RS18705 PF04239 Protein of unknown function (DUF421) CLJU_RS18710 PF04239 Protein of unknown function (DUF421) CLJU_RS18730 PF00005 ABC transporter CLJU_RS18735 PF01032 FecCD transport family CLJU_RS18740 PF08241 Methyltransferase domain CLJU_RS18750 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CLJU_RS18750 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CLJU_RS18755 PF08402 TOBE domain CLJU_RS18755 PF00005 ABC transporter CLJU_RS18760 PF00528 Binding-protein-dependent transport system inner membrane component CLJU_RS18775 PF01743 Poly A polymerase head domain CLJU_RS18775 PF12627 Probable RNA and SrmB- binding site of polymerase A CLJU_RS18775 PF01966 HD domain CLJU_RS18785 PF01202 Shikimate kinase CLJU_RS18800 PF01966 HD domain CLJU_RS18805 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CLJU_RS18810 PF00814 Glycoprotease family CLJU_RS18815 PF00583 Acetyltransferase (GNAT) family CLJU_RS18820 PF00579 tRNA synthetases class I (W and Y) CLJU_RS18820 PF01479 S4 domain CLJU_RS18830 PF04326 Putative DNA-binding domain CLJU_RS18855 PF00009 Elongation factor Tu GTP binding domain CLJU_RS18855 PF03144 Elongation factor Tu domain 2 CLJU_RS18855 PF16658 Class II release factor RF3, C-terminal domain CLJU_RS18860 PF00579 tRNA synthetases class I (W and Y) CLJU_RS18865 PF06165 Glycosyltransferase family 36 CLJU_RS18865 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CLJU_RS18865 PF10091 Putative glucoamylase CLJU_RS18870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLJU_RS18870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLJU_RS18875 PF13840 ACT domain CLJU_RS18875 PF00696 Amino acid kinase family CLJU_RS18880 PF04055 Radical SAM superfamily CLJU_RS18880 PF06968 Biotin and Thiamin Synthesis associated domain CLJU_RS18885 PF13538 UvrD-like helicase C-terminal domain CLJU_RS18890 PF01434 Peptidase family M41 CLJU_RS18890 PF06480 FtsH Extracellular CLJU_RS18890 PF17862 AAA+ lid domain CLJU_RS18890 PF00004 ATPase family associated with various cellular activities (AAA) CLJU_RS18895 PF09180 Prolyl-tRNA synthetase, C-terminal CLJU_RS18895 PF03129 Anticodon binding domain CLJU_RS18895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLJU_RS18905 PF02595 Glycerate kinase family CLJU_RS18910 PF07690 Major Facilitator Superfamily CLJU_RS18915 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CLJU_RS18920 PF07005 Sugar-binding N-terminal domain CLJU_RS18920 PF17042 Nucleotide-binding C-terminal domain CLJU_RS18925 PF01522 Polysaccharide deacetylase CLJU_RS18935 PF03390 2-hydroxycarboxylate transporter family CLJU_RS18940 PF00390 Malic enzyme, N-terminal domain CLJU_RS18940 PF03949 Malic enzyme, NAD binding domain CLJU_RS18945 PF00072 Response regulator receiver domain CLJU_RS18950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS18950 PF00989 PAS fold CLJU_RS18950 PF17203 Single cache domain 3 CLJU_RS18950 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLJU_RS18955 PF00893 Small Multidrug Resistance protein CLJU_RS18975 PF02371 Transposase IS116/IS110/IS902 family CLJU_RS18975 PF01548 Transposase CLJU_RS18980 PF01381 Helix-turn-helix CLJU_RS18990 PF03466 LysR substrate binding domain CLJU_RS18990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS19000 PF08240 Alcohol dehydrogenase GroES-like domain CLJU_RS19000 PF00107 Zinc-binding dehydrogenase CLJU_RS19005 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS19005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLJU_RS19010 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CLJU_RS19010 PF00391 PEP-utilising enzyme, mobile domain CLJU_RS19015 PF00440 Bacterial regulatory proteins, tetR family CLJU_RS19015 PF08361 MAATS-type transcriptional repressor, C-terminal region CLJU_RS19025 PF00005 ABC transporter CLJU_RS19030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS19035 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS19035 PF00072 Response regulator receiver domain CLJU_RS19040 PF00144 Beta-lactamase CLJU_RS19045 PF00144 Beta-lactamase CLJU_RS19050 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS19050 PF00072 Response regulator receiver domain CLJU_RS19055 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS19055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS19055 PF16736 Single Cache-like CLJU_RS19055 PF00989 PAS fold CLJU_RS19080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS19080 PF02743 Cache domain CLJU_RS19080 PF00672 HAMP domain CLJU_RS19095 PF01207 Dihydrouridine synthase (Dus) CLJU_RS19105 PF03793 PASTA domain CLJU_RS19105 PF00905 Penicillin binding protein transpeptidase domain CLJU_RS19105 PF03717 Penicillin-binding Protein dimerisation domain CLJU_RS19125 PF03323 Bacillus/Clostridium GerA spore germination protein CLJU_RS19140 PF04138 GtrA-like protein CLJU_RS19145 PF00535 Glycosyl transferase family 2 CLJU_RS19160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLJU_RS19160 PF00205 Thiamine pyrophosphate enzyme, central domain CLJU_RS19160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLJU_RS19165 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS19170 PF03466 LysR substrate binding domain CLJU_RS19180 PF00324 Amino acid permease CLJU_RS19185 PF03323 Bacillus/Clostridium GerA spore germination protein CLJU_RS19190 PF05504 Spore germination B3/ GerAC like, C-terminal CLJU_RS19215 PF03323 Bacillus/Clostridium GerA spore germination protein CLJU_RS19240 PF01668 SmpB protein CLJU_RS19245 PF00575 S1 RNA binding domain CLJU_RS19245 PF08206 Ribonuclease B OB domain CLJU_RS19245 PF00773 RNB domain CLJU_RS19245 PF17876 Cold shock domain CLJU_RS19250 PF03840 Preprotein translocase SecG subunit CLJU_RS19255 PF00113 Enolase, C-terminal TIM barrel domain CLJU_RS19255 PF03952 Enolase, N-terminal domain CLJU_RS19260 PF01676 Metalloenzyme superfamily CLJU_RS19260 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CLJU_RS19265 PF00121 Triosephosphate isomerase CLJU_RS19270 PF00162 Phosphoglycerate kinase CLJU_RS19275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLJU_RS19275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLJU_RS19280 PF04198 Putative sugar-binding domain CLJU_RS19285 PF04552 Sigma-54, DNA binding domain CLJU_RS19285 PF04963 Sigma-54 factor, core binding domain CLJU_RS19285 PF00309 Sigma-54 factor, Activator interacting domain (AID) CLJU_RS19290 PF02645 Uncharacterised protein, DegV family COG1307 CLJU_RS19295 PF00588 SpoU rRNA Methylase family CLJU_RS19300 PF04122 Putative cell wall binding repeat 2 CLJU_RS19300 PF01520 N-acetylmuramoyl-L-alanine amidase CLJU_RS19310 PF00892 EamA-like transporter family CLJU_RS19325 PF04294 VanW like protein CLJU_RS19330 PF18146 Damage-inducible protein CinA KH domain CLJU_RS19330 PF00994 Probable molybdopterin binding domain CLJU_RS19330 PF02464 Competence-damaged protein CLJU_RS19335 PF00730 HhH-GPD superfamily base excision DNA repair protein CLJU_RS19335 PF00633 Helix-hairpin-helix motif CLJU_RS19335 PF10576 Iron-sulfur binding domain of endonuclease III CLJU_RS19345 PF08331 Domain of unknown function (DUF1730) CLJU_RS19350 PF00132 Bacterial transferase hexapeptide (six repeats) CLJU_RS19355 PF00291 Pyridoxal-phosphate dependent enzyme CLJU_RS19360 PF03631 Virulence factor BrkB CLJU_RS19370 PF02915 Rubrerythrin CLJU_RS19380 PF07690 Major Facilitator Superfamily CLJU_RS19385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS19385 PF03466 LysR substrate binding domain CLJU_RS19395 PF00501 AMP-binding enzyme CLJU_RS19395 PF13193 AMP-binding enzyme C-terminal domain CLJU_RS19400 PF01012 Electron transfer flavoprotein domain CLJU_RS19400 PF00766 Electron transfer flavoprotein FAD-binding domain CLJU_RS19405 PF01012 Electron transfer flavoprotein domain CLJU_RS19410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLJU_RS19410 PF02770 Acyl-CoA dehydrogenase, middle domain CLJU_RS19410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLJU_RS19415 PF02515 CoA-transferase family III CLJU_RS19420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLJU_RS19420 PF02770 Acyl-CoA dehydrogenase, middle domain CLJU_RS19420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLJU_RS19425 PF01238 Phosphomannose isomerase type I CLJU_RS19450 PF00180 Isocitrate/isopropylmalate dehydrogenase CLJU_RS19455 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS19455 PF00072 Response regulator receiver domain CLJU_RS19460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS19460 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS19460 PF13493 Domain of unknown function (DUF4118) CLJU_RS19460 PF02702 Osmosensitive K+ channel His kinase sensor domain CLJU_RS19470 PF02669 K+-transporting ATPase, c chain CLJU_RS19480 PF03814 Potassium-transporting ATPase A subunit CLJU_RS19485 PF13520 Amino acid permease CLJU_RS19490 PF01680 SOR/SNZ family CLJU_RS19495 PF01174 SNO glutamine amidotransferase family CLJU_RS19500 PF02653 Branched-chain amino acid transport system / permease component CLJU_RS19510 PF00005 ABC transporter CLJU_RS19515 PF02608 ABC transporter substrate-binding protein PnrA-like CLJU_RS19520 PF00923 Transaldolase/Fructose-6-phosphate aldolase CLJU_RS19540 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS19545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS19545 PF06580 Histidine kinase CLJU_RS19550 PF10114 Sensory domain found in PocR CLJU_RS19550 PF12833 Helix-turn-helix domain CLJU_RS19555 PF00936 BMC domain CLJU_RS19560 PF00936 BMC domain CLJU_RS19565 PF06130 Phosphate propanoyltransferase CLJU_RS19570 PF00171 Aldehyde dehydrogenase family CLJU_RS19570 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS19575 PF00936 BMC domain CLJU_RS19585 PF00936 BMC domain CLJU_RS19590 PF10531 SLBB domain CLJU_RS19590 PF13375 RnfC Barrel sandwich hybrid domain CLJU_RS19590 PF13237 4Fe-4S dicluster domain CLJU_RS19590 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLJU_RS19615 PF04055 Radical SAM superfamily CLJU_RS19615 PF13187 4Fe-4S dicluster domain CLJU_RS19620 PF01228 Glycine radical CLJU_RS19620 PF02901 Pyruvate formate lyase-like CLJU_RS19625 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS19625 PF00171 Aldehyde dehydrogenase family CLJU_RS19630 PF00936 BMC domain CLJU_RS19635 PF00936 BMC domain CLJU_RS19660 PF00155 Aminotransferase class I and II CLJU_RS19660 PF00392 Bacterial regulatory proteins, gntR family CLJU_RS19670 PF07690 Major Facilitator Superfamily CLJU_RS19675 PF00440 Bacterial regulatory proteins, tetR family CLJU_RS19680 PF00465 Iron-containing alcohol dehydrogenase CLJU_RS19685 PF09335 SNARE associated Golgi protein CLJU_RS19690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS19695 PF00072 Response regulator receiver domain CLJU_RS19695 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS19700 PF02687 FtsX-like permease family CLJU_RS19705 PF00005 ABC transporter CLJU_RS19730 PF12848 ABC transporter CLJU_RS19730 PF00005 ABC transporter CLJU_RS19745 PF13411 MerR HTH family regulatory protein CLJU_RS19750 PF04389 Peptidase family M28 CLJU_RS19755 PF06445 GyrI-like small molecule binding domain CLJU_RS19755 PF13411 MerR HTH family regulatory protein CLJU_RS19760 PF01554 MatE CLJU_RS19765 PF01381 Helix-turn-helix CLJU_RS19770 PF04127 DNA / pantothenate metabolism flavoprotein CLJU_RS19770 PF02441 Flavoprotein CLJU_RS19775 PF01522 Polysaccharide deacetylase CLJU_RS19800 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS19805 PF01012 Electron transfer flavoprotein domain CLJU_RS19805 PF00766 Electron transfer flavoprotein FAD-binding domain CLJU_RS19810 PF01012 Electron transfer flavoprotein domain CLJU_RS19825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS19825 PF16736 Single Cache-like CLJU_RS19825 PF00989 PAS fold CLJU_RS19825 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS19830 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS19830 PF00072 Response regulator receiver domain CLJU_RS19835 PF01040 UbiA prenyltransferase family CLJU_RS19845 PF01209 ubiE/COQ5 methyltransferase family CLJU_RS19850 PF00348 Polyprenyl synthetase CLJU_RS19865 PF03458 UPF0126 domain CLJU_RS19870 PF03553 Na+/H+ antiporter family CLJU_RS19875 PF00291 Pyridoxal-phosphate dependent enzyme CLJU_RS19880 PF01042 Endoribonuclease L-PSP CLJU_RS19885 PF02954 Bacterial regulatory protein, Fis family CLJU_RS19885 PF13188 PAS domain CLJU_RS19885 PF00158 Sigma-54 interaction domain CLJU_RS19890 PF01168 Alanine racemase, N-terminal domain CLJU_RS19890 PF00842 Alanine racemase, C-terminal domain CLJU_RS19895 PF01042 Endoribonuclease L-PSP CLJU_RS19900 PF00158 Sigma-54 interaction domain CLJU_RS19900 PF13426 PAS domain CLJU_RS19900 PF02954 Bacterial regulatory protein, Fis family CLJU_RS19905 PF01380 SIS domain CLJU_RS19915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLJU_RS19915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLJU_RS19915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLJU_RS19915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLJU_RS19930 PF02457 DisA bacterial checkpoint controller nucleotide-binding CLJU_RS19935 PF07486 Cell Wall Hydrolase CLJU_RS19935 PF01471 Putative peptidoglycan binding domain CLJU_RS19940 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLJU_RS19945 PF00085 Thioredoxin CLJU_RS19960 PF05524 PEP-utilising enzyme, N-terminal CLJU_RS19960 PF00391 PEP-utilising enzyme, mobile domain CLJU_RS19960 PF02896 PEP-utilising enzyme, TIM barrel domain CLJU_RS19970 PF08218 Citrate lyase ligase C-terminal domain CLJU_RS19975 PF04223 Citrate lyase, alpha subunit (CitF) CLJU_RS19980 PF03328 HpcH/HpaI aldolase/citrate lyase family CLJU_RS19985 PF06857 Malonate decarboxylase delta subunit (MdcD) CLJU_RS19990 PF05683 Fumarase C-terminus CLJU_RS20000 PF07476 Methylaspartate ammonia-lyase C-terminus CLJU_RS20000 PF05034 Methylaspartate ammonia-lyase N-terminus CLJU_RS20005 PF06368 Methylaspartate mutase E chain (MutE) CLJU_RS20010 PF13941 MutL protein CLJU_RS20015 PF02310 B12 binding domain CLJU_RS20025 PF00324 Amino acid permease CLJU_RS20030 PF02954 Bacterial regulatory protein, Fis family CLJU_RS20030 PF00158 Sigma-54 interaction domain CLJU_RS20030 PF13188 PAS domain CLJU_RS20035 PF07722 Peptidase C26 CLJU_RS20040 PF01520 N-acetylmuramoyl-L-alanine amidase CLJU_RS20040 PF00395 S-layer homology domain CLJU_RS20045 PF00380 Ribosomal protein S9/S16 CLJU_RS20050 PF00572 Ribosomal protein L13 CLJU_RS20055 PF01416 tRNA pseudouridine synthase CLJU_RS20060 PF02361 Cobalt transport protein CLJU_RS20065 PF00005 ABC transporter CLJU_RS20070 PF00005 ABC transporter CLJU_RS20075 PF01196 Ribosomal protein L17 CLJU_RS20080 PF01000 RNA polymerase Rpb3/RpoA insert domain CLJU_RS20080 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CLJU_RS20080 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CLJU_RS20085 PF01479 S4 domain CLJU_RS20085 PF00163 Ribosomal protein S4/S9 N-terminal domain CLJU_RS20090 PF00411 Ribosomal protein S11 CLJU_RS20095 PF00416 Ribosomal protein S13/S18 CLJU_RS20100 PF00444 Ribosomal protein L36 CLJU_RS20105 PF01176 Translation initiation factor 1A / IF-1 CLJU_RS20110 PF05191 Adenylate kinase, active site lid CLJU_RS20115 PF00344 SecY translocase CLJU_RS20120 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CLJU_RS20125 PF00327 Ribosomal protein L30p/L7e CLJU_RS20130 PF00333 Ribosomal protein S5, N-terminal domain CLJU_RS20130 PF03719 Ribosomal protein S5, C-terminal domain CLJU_RS20135 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CLJU_RS20140 PF00347 Ribosomal protein L6 CLJU_RS20145 PF00410 Ribosomal protein S8 CLJU_RS20150 PF00253 Ribosomal protein S14p/S29e CLJU_RS20155 PF00673 ribosomal L5P family C-terminus CLJU_RS20155 PF00281 Ribosomal protein L5 CLJU_RS20160 PF00467 KOW motif CLJU_RS20160 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CLJU_RS20165 PF00238 Ribosomal protein L14p/L23e CLJU_RS20170 PF00366 Ribosomal protein S17 CLJU_RS20175 PF00831 Ribosomal L29 protein CLJU_RS20180 PF00252 Ribosomal protein L16p/L10e CLJU_RS20185 PF00189 Ribosomal protein S3, C-terminal domain CLJU_RS20185 PF07650 KH domain CLJU_RS20190 PF00237 Ribosomal protein L22p/L17e CLJU_RS20195 PF00203 Ribosomal protein S19 CLJU_RS20200 PF03947 Ribosomal Proteins L2, C-terminal domain CLJU_RS20200 PF00181 Ribosomal Proteins L2, RNA binding domain CLJU_RS20205 PF00276 Ribosomal protein L23 CLJU_RS20210 PF00573 Ribosomal protein L4/L1 family CLJU_RS20215 PF00297 Ribosomal protein L3 CLJU_RS20220 PF00338 Ribosomal protein S10p/S20e CLJU_RS20225 PF00009 Elongation factor Tu GTP binding domain CLJU_RS20225 PF03143 Elongation factor Tu C-terminal domain CLJU_RS20225 PF03144 Elongation factor Tu domain 2 CLJU_RS20230 PF00679 Elongation factor G C-terminus CLJU_RS20230 PF03144 Elongation factor Tu domain 2 CLJU_RS20230 PF03764 Elongation factor G, domain IV CLJU_RS20230 PF00009 Elongation factor Tu GTP binding domain CLJU_RS20230 PF14492 Elongation Factor G, domain II CLJU_RS20235 PF00177 Ribosomal protein S7p/S5e CLJU_RS20240 PF00164 Ribosomal protein S12/S23 CLJU_RS20245 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CLJU_RS20250 PF04998 RNA polymerase Rpb1, domain 5 CLJU_RS20250 PF00623 RNA polymerase Rpb1, domain 2 CLJU_RS20250 PF05000 RNA polymerase Rpb1, domain 4 CLJU_RS20250 PF04997 RNA polymerase Rpb1, domain 1 CLJU_RS20250 PF04983 RNA polymerase Rpb1, domain 3 CLJU_RS20255 PF10385 RNA polymerase beta subunit external 1 domain CLJU_RS20255 PF04563 RNA polymerase beta subunit CLJU_RS20255 PF00562 RNA polymerase Rpb2, domain 6 CLJU_RS20255 PF04565 RNA polymerase Rpb2, domain 3 CLJU_RS20255 PF04560 RNA polymerase Rpb2, domain 7 CLJU_RS20255 PF04561 RNA polymerase Rpb2, domain 2 CLJU_RS20260 PF00542 Ribosomal protein L7/L12 C-terminal domain CLJU_RS20260 PF16320 Ribosomal protein L7/L12 dimerisation domain CLJU_RS20265 PF00466 Ribosomal protein L10 CLJU_RS20270 PF00687 Ribosomal protein L1p/L10e family CLJU_RS20275 PF03946 Ribosomal protein L11, N-terminal domain CLJU_RS20275 PF00298 Ribosomal protein L11, RNA binding domain CLJU_RS20280 PF00467 KOW motif CLJU_RS20280 PF02357 Transcription termination factor nusG CLJU_RS20290 PF00471 Ribosomal protein L33 CLJU_RS20295 PF03144 Elongation factor Tu domain 2 CLJU_RS20295 PF03143 Elongation factor Tu C-terminal domain CLJU_RS20295 PF00009 Elongation factor Tu GTP binding domain CLJU_RS20310 PF08281 Sigma-70, region 4 CLJU_RS20310 PF04542 Sigma-70 region 2 CLJU_RS20320 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLJU_RS20320 PF00588 SpoU rRNA Methylase family CLJU_RS20325 PF00636 Ribonuclease III domain CLJU_RS20330 PF09190 DALR domain CLJU_RS20330 PF01406 tRNA synthetases class I (C) catalytic domain CLJU_RS20335 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLJU_RS20350 PF10635 DisA bacterial checkpoint controller linker region CLJU_RS20350 PF12826 Helix-hairpin-helix motif CLJU_RS20350 PF02457 DisA bacterial checkpoint controller nucleotide-binding CLJU_RS20355 PF18073 Rubredoxin metal binding domain CLJU_RS20360 PF10431 C-terminal, D2-small domain, of ClpB protein CLJU_RS20360 PF02861 Clp amino terminal domain, pathogenicity island component CLJU_RS20360 PF00004 ATPase family associated with various cellular activities (AAA) CLJU_RS20360 PF07724 AAA domain (Cdc48 subfamily) CLJU_RS20360 PF17871 AAA lid domain CLJU_RS20365 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CLJU_RS20370 PF02151 UvrB/uvrC motif CLJU_RS20375 PF17727 CtsR C-terminal dimerization domain CLJU_RS20375 PF05848 CtsR N-terminal HTH domain CLJU_RS20385 PF00679 Elongation factor G C-terminus CLJU_RS20385 PF03764 Elongation factor G, domain IV CLJU_RS20385 PF14492 Elongation Factor G, domain II CLJU_RS20385 PF03144 Elongation factor Tu domain 2 CLJU_RS20385 PF00009 Elongation factor Tu GTP binding domain CLJU_RS20420 PF08245 Mur ligase middle domain CLJU_RS20425 PF03129 Anticodon binding domain CLJU_RS20425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLJU_RS20435 PF01336 OB-fold nucleic acid binding domain CLJU_RS20435 PF00152 tRNA synthetases class II (D, K and N) CLJU_RS20440 PF03449 Transcription elongation factor, N-terminal CLJU_RS20440 PF01272 Transcription elongation factor, GreA/GreB, C-term CLJU_RS20450 PF01207 Dihydrouridine synthase (Dus) CLJU_RS20455 PF03309 Type III pantothenate kinase CLJU_RS20460 PF00004 ATPase family associated with various cellular activities (AAA) CLJU_RS20460 PF01434 Peptidase family M41 CLJU_RS20460 PF17862 AAA+ lid domain CLJU_RS20465 PF00156 Phosphoribosyl transferase domain CLJU_RS20470 PF11734 TilS substrate C-terminal domain CLJU_RS20470 PF01171 PP-loop family CLJU_RS20505 PF00575 S1 RNA binding domain CLJU_RS20525 PF01479 S4 domain CLJU_RS20530 PF00216 Bacterial DNA-binding protein CLJU_RS20535 PF03819 MazG nucleotide pyrophosphohydrolase domain CLJU_RS20535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLJU_RS20540 PF14667 Polysaccharide biosynthesis C-terminal domain CLJU_RS20540 PF01943 Polysaccharide biosynthesis protein CLJU_RS20545 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLJU_RS20545 PF15714 Stage V sporulation protein T C-terminal, transcription factor CLJU_RS20555 PF17757 UvrB interaction domain CLJU_RS20555 PF03461 TRCF domain CLJU_RS20555 PF00271 Helicase conserved C-terminal domain CLJU_RS20555 PF00270 DEAD/DEAH box helicase CLJU_RS20555 PF02559 CarD-like/TRCF domain CLJU_RS20560 PF01195 Peptidyl-tRNA hydrolase CLJU_RS20565 PF13180 PDZ domain CLJU_RS20570 PF13426 PAS domain CLJU_RS20570 PF00512 His Kinase A (phospho-acceptor) domain CLJU_RS20570 PF00672 HAMP domain CLJU_RS20570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLJU_RS20575 PF00072 Response regulator receiver domain CLJU_RS20575 PF00486 Transcriptional regulatory protein, C terminal CLJU_RS20580 PF14572 Phosphoribosyl synthetase-associated domain CLJU_RS20580 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CLJU_RS20585 PF00483 Nucleotidyl transferase CLJU_RS20585 PF00132 Bacterial transferase hexapeptide (six repeats) CLJU_RS20590 PF04026 SpoVG CLJU_RS20595 PF09182 Bacterial purine repressor, N-terminal CLJU_RS20595 PF00156 Phosphoribosyl transferase domain CLJU_RS20600 PF02875 Mur ligase family, glutamate ligase domain CLJU_RS20600 PF01225 Mur ligase family, catalytic domain CLJU_RS20600 PF08245 Mur ligase middle domain CLJU_RS20620 PF01381 Helix-turn-helix CLJU_RS20625 PF13419 Haloacid dehalogenase-like hydrolase CLJU_RS20635 PF04029 2-phosphosulpholactate phosphatase CLJU_RS20640 PF04055 Radical SAM superfamily CLJU_RS20640 PF16199 Radical_SAM C-terminal domain CLJU_RS20665 PF01177 Asp/Glu/Hydantoin racemase CLJU_RS20670 PF00120 Glutamine synthetase, catalytic domain CLJU_RS20670 PF03951 Glutamine synthetase, beta-Grasp domain CLJU_RS20680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLJU_RS20685 PF00753 Metallo-beta-lactamase superfamily CLJU_RS20690 PF02810 SEC-C motif CLJU_RS20690 PF07517 SecA DEAD-like domain CLJU_RS20690 PF01043 SecA preprotein cross-linking domain CLJU_RS20690 PF07516 SecA Wing and Scaffold domain CLJU_RS20700 PF00152 tRNA synthetases class II (D, K and N) CLJU_RS20700 PF01336 OB-fold nucleic acid binding domain CLJU_RS20720 PF03466 LysR substrate binding domain CLJU_RS20720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS20725 PF00082 Subtilase family CLJU_RS20730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLJU_RS20730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLJU_RS20735 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CLJU_RS20740 PF17848 Acetyl-coA carboxylase zinc finger domain CLJU_RS20740 PF01039 Carboxyl transferase domain CLJU_RS20745 PF02785 Biotin carboxylase C-terminal domain CLJU_RS20745 PF00289 Biotin carboxylase, N-terminal domain CLJU_RS20745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLJU_RS20750 PF07977 FabA-like domain CLJU_RS20755 PF00364 Biotin-requiring enzyme CLJU_RS20760 PF00109 Beta-ketoacyl synthase, N-terminal domain CLJU_RS20760 PF02801 Beta-ketoacyl synthase, C-terminal domain CLJU_RS20770 PF00698 Acyl transferase domain CLJU_RS20775 PF03060 Nitronate monooxygenase CLJU_RS20780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLJU_RS20780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLJU_RS20785 PF01047 MarR family CLJU_RS20790 PF03060 Nitronate monooxygenase CLJU_RS20840 PF03618 Kinase/pyrophosphorylase CLJU_RS20860 PF00709 Adenylosuccinate synthetase CLJU_RS20875 PF10415 Fumarase C C-terminus CLJU_RS20875 PF00206 Lyase CLJU_RS20880 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CLJU_RS20880 PF01926 50S ribosome-binding GTPase CLJU_RS20890 PF02424 ApbE family CLJU_RS20895 PF02127 Aminopeptidase I zinc metalloprotease (M18) CLJU_RS20910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS20910 PF03466 LysR substrate binding domain CLJU_RS20915 PF01925 Sulfite exporter TauE/SafE CLJU_RS20920 PF00072 Response regulator receiver domain CLJU_RS20920 PF08664 YcbB domain CLJU_RS20930 PF00672 HAMP domain CLJU_RS20930 PF02743 Cache domain CLJU_RS20930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS20935 PF04371 Porphyromonas-type peptidyl-arginine deiminase CLJU_RS20940 PF13520 Amino acid permease CLJU_RS20945 PF02954 Bacterial regulatory protein, Fis family CLJU_RS20945 PF13188 PAS domain CLJU_RS20945 PF00158 Sigma-54 interaction domain CLJU_RS20950 PF02954 Bacterial regulatory protein, Fis family CLJU_RS20950 PF13188 PAS domain CLJU_RS20950 PF00158 Sigma-54 interaction domain CLJU_RS20965 PF00696 Amino acid kinase family CLJU_RS20970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLJU_RS20970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLJU_RS20975 PF05336 L-rhamnose mutarotase CLJU_RS20980 PF07690 Major Facilitator Superfamily CLJU_RS20985 PF00596 Class II Aldolase and Adducin N-terminal domain CLJU_RS20990 PF06134 L-rhamnose isomerase (RhaA) CLJU_RS20995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLJU_RS20995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLJU_RS21000 PF08220 DeoR-like helix-turn-helix domain CLJU_RS21000 PF00455 DeoR C terminal sensor domain CLJU_RS21005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLJU_RS21005 PF03466 LysR substrate binding domain CLJU_RS21010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS21015 PF00543 Nitrogen regulatory protein P-II CLJU_RS21030 PF00011 Hsp20/alpha crystallin family CLJU_RS21035 PF00011 Hsp20/alpha crystallin family CLJU_RS21040 PF03796 DnaB-like helicase C terminal domain CLJU_RS21040 PF00772 DnaB-like helicase N terminal domain CLJU_RS21045 PF00004 ATPase family associated with various cellular activities (AAA) CLJU_RS21045 PF05362 Lon protease (S16) C-terminal proteolytic domain CLJU_RS21050 PF01281 Ribosomal protein L9, N-terminal domain CLJU_RS21050 PF03948 Ribosomal protein L9, C-terminal domain CLJU_RS21055 PF01368 DHH family CLJU_RS21055 PF02272 DHHA1 domain CLJU_RS21070 PF01084 Ribosomal protein S18 CLJU_RS21075 PF00436 Single-strand binding protein family CLJU_RS21080 PF01250 Ribosomal protein S6 CLJU_RS21090 PF00924 Mechanosensitive ion channel CLJU_RS21100 PF01594 AI-2E family transporter CLJU_RS21105 PF06866 Protein of unknown function (DUF1256) CLJU_RS21120 PF17762 HTH domain found in ParB protein CLJU_RS21120 PF02195 ParB-like nuclease domain CLJU_RS21125 PF13614 AAA domain CLJU_RS21130 PF17762 HTH domain found in ParB protein CLJU_RS21130 PF02195 ParB-like nuclease domain CLJU_RS21135 PF02527 rRNA small subunit methyltransferase G CLJU_RS21140 PF13932 GidA associated domain CLJU_RS21140 PF01134 Glucose inhibited division protein A CLJU_RS21145 PF12631 MnmE helical domain CLJU_RS21145 PF01926 50S ribosome-binding GTPase CLJU_RS21145 PF10396 GTP-binding protein TrmE N-terminus CLJU_RS21150 PF01424 R3H domain CLJU_RS21150 PF14804 Jag N-terminus CLJU_RS21155 PF02096 60Kd inner membrane protein CLJU_RS21160 PF01809 Putative membrane protein insertion efficiency factor CLJU_RS21165 PF00825 Ribonuclease P CLJU_RS21170 PF00468 Ribosomal protein L34 CLJU_RS21180 PF01381 Helix-turn-helix CLJU_RS21180 PF08671 Anti-repressor SinI CLJU_RS21200 PF00963 Cohesin domain CLJU_RS21200 PF00942 Cellulose binding domain CLJU_RS21200 PF03442 Carbohydrate binding domain X2 CLJU_RS21210 PF04122 Putative cell wall binding repeat 2 CLJU_RS21210 PF01520 N-acetylmuramoyl-L-alanine amidase CLJU_RS21220 PF00672 HAMP domain CLJU_RS21220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS21235 PF02899 Phage integrase, N-terminal SAM-like domain CLJU_RS21235 PF00589 Phage integrase family CLJU_RS21285 PF00877 NlpC/P60 family CLJU_RS21305 PF02368 Bacterial Ig-like domain (group 2) CLJU_RS21310 PF02368 Bacterial Ig-like domain (group 2) CLJU_RS21315 PF04122 Putative cell wall binding repeat 2 CLJU_RS21315 PF08486 Stage II sporulation protein CLJU_RS21320 PF02368 Bacterial Ig-like domain (group 2) CLJU_RS21325 PF02368 Bacterial Ig-like domain (group 2) CLJU_RS21340 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLJU_RS21385 PF02743 Cache domain CLJU_RS21385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLJU_RS21385 PF00672 HAMP domain CLJU_RS21395 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CLJU_RS21460 PF06445 GyrI-like small molecule binding domain CLJU_RS21460 PF13411 MerR HTH family regulatory protein CLJU_RS21475 PF00563 EAL domain CLJU_RS21475 PF12792 CSS motif domain associated with EAL CLJU_RS21485 PF00563 EAL domain CLJU_RS21485 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS21485 PF01590 GAF domain CLJU_RS21485 PF00360 Phytochrome region CLJU_RS21495 PF00929 Exonuclease CLJU_RS21495 PF02811 PHP domain CLJU_RS21495 PF11490 DNA polymerase III polC-type N-terminus II CLJU_RS21495 PF14579 Helix-hairpin-helix motif CLJU_RS21495 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLJU_RS21495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLJU_RS21500 PF00717 Peptidase S24-like CLJU_RS21500 PF01726 LexA DNA binding domain CLJU_RS21505 PF05231 MASE1 CLJU_RS21505 PF00990 Diguanylate cyclase, GGDEF domain CLJU_RS21505 PF00563 EAL domain CLJU_RS21505 PF13426 PAS domain CLJU_RS21505 PF08447 PAS fold CLJU_RS21505 PF08448 PAS fold CLJU_RS21510 PF00909 Ammonium Transporter Family CLJU_RS21515 PF00909 Ammonium Transporter Family