locus-tag	class	description
JFP838_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JFP838_RS00010	COG0592	DNA-directed DNA polymerase activity
JFP838_RS00030	COG0187	DNA topoisomerase II activity
JFP838_RS00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JFP838_RS00065	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
JFP838_RS00075	COG0579	oxidoreductase
JFP838_RS00085	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JFP838_RS00145	COG3481	metal-dependent phosphohydrolase, HD sub domain
JFP838_RS00195	COG4536	flavin adenine dinucleotide binding
JFP838_RS00200	COG0590	tRNA wobble adenosine to inosine editing
JFP838_RS00220	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
JFP838_RS00230	COG0523	cobalamin synthesis protein
JFP838_RS00235	COG0523	cobalamin synthesis protein
JFP838_RS00240	COG0701	Predicted permease
JFP838_RS00270	COG1114	Component of the transport system for branched-chain amino acids
JFP838_RS00290	COG1131	(ABC) transporter
JFP838_RS00295	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JFP838_RS00300	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JFP838_RS00340	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JFP838_RS00345	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JFP838_RS00355	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JFP838_RS00360	COG1428	Deoxynucleoside kinase
JFP838_RS00385	COG1840	ABC-type Fe3 transport system, periplasmic component
JFP838_RS00400	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
JFP838_RS00435	COG0531	amino acid
JFP838_RS00450	COG0058	SHG alpha-glucan phosphorylase activity
JFP838_RS00470	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JFP838_RS00480	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JFP838_RS00485	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
JFP838_RS00510	COG3711	transcriptional antiterminator
JFP838_RS00520	COG2190	(PTS) system
JFP838_RS00520	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JFP838_RS00520	COG1263	PTS System
JFP838_RS00525	COG1309	transcriptional regulator
JFP838_RS00550	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JFP838_RS00560	COG1940	carbohydrate kinase activity
JFP838_RS00565	COG1592	Rubrerythrin
JFP838_RS00565	COG1773	rubredoxin
JFP838_RS00570	COG0406	alpha-ribazole phosphatase activity
JFP838_RS00575	COG1349	DNA-binding transcription factor activity
JFP838_RS00585	COG0191	fructose-bisphosphate aldolase activity
JFP838_RS00590	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JFP838_RS00605	COG0673	inositol 2-dehydrogenase activity
JFP838_RS00610	COG1082	Xylose isomerase domain protein TIM barrel
JFP838_RS00615	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JFP838_RS00620	COG0673	inositol 2-dehydrogenase activity
JFP838_RS00625	COG2116	formate transmembrane transporter activity
JFP838_RS00630	COG1024	Enoyl-CoA hydratase
JFP838_RS00635	COG4670	ketone body catabolic process
JFP838_RS00640	COG1960	acyl-CoA dehydrogenase activity
JFP838_RS00645	COG3711	transcriptional antiterminator
JFP838_RS00650	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JFP838_RS00675	COG2376	Dihydroxyacetone kinase
JFP838_RS00685	COG0039	L-malate dehydrogenase activity
JFP838_RS00720	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JFP838_RS00745	COG0745	RESPONSE REGULATOR receiver
JFP838_RS00750	COG2205	protein histidine kinase activity
JFP838_RS00755	COG1136	(ABC) transporter
JFP838_RS00755	COG0577	efflux transmembrane transporter activity
JFP838_RS00770	COG1136	(ABC) transporter
JFP838_RS00790	COG3764	Sortase (surface protein transpeptidase)
JFP838_RS00840	COG0488	(ABC) transporter
JFP838_RS00845	COG3655	Transcriptional regulator
JFP838_RS00885	COG3250	beta-galactosidase activity
JFP838_RS00895	COG1028	Short-chain dehydrogenase reductase Sdr
JFP838_RS00915	COG2211	Major facilitator Superfamily
JFP838_RS00970	COG2267	carboxylic ester hydrolase activity
JFP838_RS00990	COG0531	amino acid
JFP838_RS00995	COG1874	Beta-galactosidase
JFP838_RS01040	COG0626	cystathionine gamma-synthase activity
JFP838_RS01045	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JFP838_RS01070	COG1131	(ABC) transporter
JFP838_RS01075	COG0778	Nitroreductase
JFP838_RS01080	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
JFP838_RS01085	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JFP838_RS01090	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JFP838_RS01095	COG2731	YhcH YjgK YiaL family protein
JFP838_RS01120	COG0310	cobalt ion transport
JFP838_RS01130	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JFP838_RS01145	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
JFP838_RS01150	COG0739	heme binding
JFP838_RS01225	COG0668	transmembrane transport
JFP838_RS01230	COG5398	heme oxygenase
JFP838_RS01235	COG0420	3'-5' exonuclease activity
JFP838_RS01240	COG0419	ATPase involved in DNA repair
JFP838_RS01250	COG2207	Transcriptional regulator
JFP838_RS01280	COG1120	ATPase activity
JFP838_RS01285	COG4988	ABC transporter
JFP838_RS01290	COG1132	(ABC) transporter
JFP838_RS01295	COG2832	Protein of unknown function (DUF454)
JFP838_RS01315	COG2271	Major facilitator Superfamily
JFP838_RS01320	COG1840	ABC-type Fe3 transport system, periplasmic component
JFP838_RS01330	COG5002	protein histidine kinase activity
JFP838_RS01335	COG0745	RESPONSE REGULATOR receiver
JFP838_RS01340	COG0475	glutathione-regulated potassium exporter activity
JFP838_RS01385	COG2076	Multidrug Resistance protein
JFP838_RS01410	COG2202	Pas domain
JFP838_RS01410	COG2200	EAL domain
JFP838_RS01410	COG2199	diguanylate cyclase activity
JFP838_RS01415	COG0484	heat shock protein binding
JFP838_RS01425	COG0443	Heat shock 70 kDa protein
JFP838_RS01470	COG0110	maltose O-acetyltransferase activity
JFP838_RS01480	COG0668	transmembrane transport
JFP838_RS01485	COG3142	Participates in the control of copper homeostasis
JFP838_RS01510	COG1472	Belongs to the glycosyl hydrolase 3 family
JFP838_RS01535	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JFP838_RS01540	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JFP838_RS01555	COG0438	transferase activity, transferring glycosyl groups
JFP838_RS01560	COG0438	transferase activity, transferring glycosyl groups
JFP838_RS01600	COG2890	protein-(glutamine-N5) methyltransferase activity
JFP838_RS01605	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JFP838_RS01610	COG2002	toxin-antitoxin pair type II binding
JFP838_RS01625	COG1316	TRANSCRIPTIONal
JFP838_RS01630	COG1295	ribonuclease BN
JFP838_RS01635	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JFP838_RS01640	COG0629	single-stranded DNA binding
JFP838_RS01645	COG0426	domain, Protein
JFP838_RS01665	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JFP838_RS01665	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JFP838_RS01685	COG3959	Transketolase, thiamine diphosphate binding domain
JFP838_RS01690	COG3958	Transketolase
JFP838_RS01695	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JFP838_RS01700	COG2884	Cell division ATP-binding protein ftsE
JFP838_RS01705	COG2177	Part of the ABC transporter FtsEX involved in
JFP838_RS01710	COG0793	Belongs to the peptidase S41A family
JFP838_RS01710	COG3409	Peptidoglycan-binding domain 1 protein
JFP838_RS01730	COG4555	ABC transporter
JFP838_RS01740	COG2755	lipolytic protein G-D-S-L family
JFP838_RS01740	COG0657	acetylesterase activity
JFP838_RS01750	COG2186	Transcriptional regulator
JFP838_RS01755	COG2086	electron transfer activity
JFP838_RS01765	COG0277	FAD linked oxidase domain protein
JFP838_RS01775	COG0681	Belongs to the peptidase S26 family
JFP838_RS01790	COG2205	protein histidine kinase activity
JFP838_RS01805	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JFP838_RS01825	COG0531	amino acid
JFP838_RS01835	COG0312	modulator of DNA gyrase
JFP838_RS01840	COG0312	modulator of DNA gyrase
JFP838_RS01850	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JFP838_RS01855	COG0514	ATP-dependent DNA helicase (RecQ)
JFP838_RS01860	COG1396	sequence-specific DNA binding
JFP838_RS01865	COG0697	spore germination
JFP838_RS01870	COG1834	amidinotransferase
JFP838_RS01875	COG0534	Mate efflux family protein
JFP838_RS01880	COG0789	Transcriptional regulator
JFP838_RS01900	COG1950	PFAM Membrane protein of
JFP838_RS01920	COG1716	ATPase activity
JFP838_RS01930	COG0768	penicillin binding
JFP838_RS01935	COG0322	excinuclease ABC activity
JFP838_RS01940	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JFP838_RS01950	COG0391	Required for morphogenesis under gluconeogenic growth conditions
JFP838_RS01970	COG1595	DNA-templated transcription, initiation
JFP838_RS01985	COG0469	pyruvate kinase activity
JFP838_RS01995	COG0300	oxidoreductase activity
JFP838_RS02000	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JFP838_RS02005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JFP838_RS02020	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
JFP838_RS02020	COG3408	Glycogen debranching enzyme
JFP838_RS02035	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JFP838_RS02035	COG3608	succinylglutamate desuccinylase aspartoacylase
JFP838_RS02040	COG3608	succinylglutamate desuccinylase aspartoacylase
JFP838_RS02040	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JFP838_RS02045	COG3829	transcription factor binding
JFP838_RS02060	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
JFP838_RS02065	COG0402	S-adenosylhomocysteine deaminase activity
JFP838_RS02070	COG2233	PERMEase
JFP838_RS02075	COG0167	dihydroorotate dehydrogenase activity
JFP838_RS02085	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JFP838_RS02090	COG0251	oxidation-reduction process
JFP838_RS02105	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JFP838_RS02110	COG1120	ATPase activity
JFP838_RS02120	COG4716	Myosin-crossreactive antigen
JFP838_RS02130	COG1132	(ABC) transporter
JFP838_RS02150	COG1191	sigma factor activity
JFP838_RS02205	COG0726	polysaccharide deacetylase
JFP838_RS02210	COG1028	Short-chain dehydrogenase reductase Sdr
JFP838_RS02215	COG1802	Transcriptional regulator
JFP838_RS02220	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
JFP838_RS02225	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
JFP838_RS02240	COG1408	metallophosphoesterase
JFP838_RS02245	COG2084	Dehydrogenase
JFP838_RS02260	COG0157	Belongs to the NadC ModD family
JFP838_RS02285	COG1114	Component of the transport system for branched-chain amino acids
JFP838_RS02290	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JFP838_RS02295	COG0277	FAD linked oxidase domain protein
JFP838_RS02300	COG0561	phosphatase activity
JFP838_RS02305	COG0579	oxidoreductase
JFP838_RS02310	COG2081	HI0933 family
JFP838_RS02320	COG0288	reversible hydration of carbon dioxide
JFP838_RS02335	COG0326	Molecular chaperone. Has ATPase activity
JFP838_RS02340	COG0733	neurotransmitter:sodium symporter activity
JFP838_RS02345	COG1609	Transcriptional regulator
JFP838_RS02350	COG0366	Alpha amylase catalytic
JFP838_RS02355	COG1263	PTS System
JFP838_RS02355	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JFP838_RS02355	COG2190	(PTS) system
JFP838_RS02365	COG0584	glycerophosphoryl diester phosphodiesterase
JFP838_RS02370	COG2271	Major facilitator Superfamily
JFP838_RS02380	COG0210	DNA helicase
JFP838_RS02380	COG0210	DNA helicase
JFP838_RS02385	COG0220	tRNA (guanine-N7-)-methyltransferase activity
JFP838_RS02445	COG1253	flavin adenine dinucleotide binding
JFP838_RS02450	COG1840	ABC-type Fe3 transport system, periplasmic component
JFP838_RS02455	COG1178	ABC-type Fe3 transport system permease component
JFP838_RS02460	COG3842	ATPase activity
JFP838_RS02465	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JFP838_RS02475	COG1725	Transcriptional regulator
JFP838_RS02480	COG1131	(ABC) transporter
JFP838_RS02495	COG0346	lactoylglutathione lyase activity
JFP838_RS02505	COG1454	alcohol dehydrogenase
JFP838_RS02515	COG0346	lactoylglutathione lyase activity
JFP838_RS02525	COG0789	Transcriptional regulator
JFP838_RS02550	COG5002	protein histidine kinase activity
JFP838_RS02570	COG3944	biosynthesis protein
JFP838_RS02575	COG0489	protein tyrosine kinase activity
JFP838_RS02580	COG1086	Polysaccharide biosynthesis protein
JFP838_RS02585	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JFP838_RS02590	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JFP838_RS02600	COG0438	transferase activity, transferring glycosyl groups
JFP838_RS02610	COG0438	transferase activity, transferring glycosyl groups
JFP838_RS02655	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JFP838_RS02670	COG1316	TRANSCRIPTIONal
JFP838_RS02675	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JFP838_RS02690	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JFP838_RS02695	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JFP838_RS02710	COG5263	repeat protein
JFP838_RS02710	COG0366	Alpha amylase catalytic
JFP838_RS02720	COG0584	glycerophosphoryl diester phosphodiesterase
JFP838_RS02725	COG4509	Sortase family
JFP838_RS02755	COG3279	Response regulator of the LytR AlgR family
JFP838_RS02770	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JFP838_RS02785	COG0561	phosphatase activity
JFP838_RS02790	COG1846	Transcriptional regulator
JFP838_RS02800	COG1132	(ABC) transporter
JFP838_RS02815	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JFP838_RS02820	COG3290	protein histidine kinase activity
JFP838_RS02825	COG4565	transcriptional regulatory protein
JFP838_RS02840	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JFP838_RS02865	COG1454	alcohol dehydrogenase
JFP838_RS02885	COG0628	permease
JFP838_RS02890	COG3104	oligopeptide transport
JFP838_RS02905	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JFP838_RS02910	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
JFP838_RS02915	COG1982	Orn Lys Arg decarboxylase major
JFP838_RS02925	COG0010	Belongs to the arginase family
JFP838_RS02930	COG3326	Membrane
JFP838_RS02945	COG2217	Heavy metal translocating P-type atpase
JFP838_RS02960	COG1174	glycine betaine transport
JFP838_RS02965	COG1595	DNA-templated transcription, initiation
JFP838_RS02975	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JFP838_RS02975	COG1263	PTS System
JFP838_RS02980	COG0366	Alpha amylase catalytic
JFP838_RS02985	COG2188	Transcriptional regulator
JFP838_RS02990	COG0768	penicillin binding
JFP838_RS03010	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JFP838_RS03010	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JFP838_RS03015	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
JFP838_RS03025	COG0432	Pfam Uncharacterised protein family UPF0047
JFP838_RS03040	COG2337	Toxic component of a toxin-antitoxin (TA) module
JFP838_RS03155	COG3883	PFAM NLP P60 protein
JFP838_RS03155	COG0791	NLP P60 protein
JFP838_RS03210	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JFP838_RS03230	COG1192	Involved in chromosome partitioning
JFP838_RS03250	COG5426	von Willebrand factor, type A
JFP838_RS03255	COG2972	Histidine kinase
JFP838_RS03260	COG2207	Transcriptional regulator
JFP838_RS03260	COG4753	response regulator
JFP838_RS03270	COG1175	transmembrane transport
JFP838_RS03275	COG0395	ABC-type sugar transport system, permease component
JFP838_RS03280	COG0398	Pfam SNARE associated Golgi protein
JFP838_RS03290	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JFP838_RS03300	COG0306	phosphate transporter
JFP838_RS03305	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JFP838_RS03305	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JFP838_RS03305	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JFP838_RS03310	COG1105	Belongs to the carbohydrate kinase PfkB family
JFP838_RS03315	COG1349	DNA-binding transcription factor activity
JFP838_RS03325	COG0628	permease
JFP838_RS03340	COG1285	pathogenesis
JFP838_RS03370	COG2816	NAD+ diphosphatase activity
JFP838_RS03375	COG0019	diaminopimelate decarboxylase activity
JFP838_RS03390	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JFP838_RS03395	COG3973	AAA domain
JFP838_RS03400	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JFP838_RS03405	COG0765	amino acid transport
JFP838_RS03410	COG1126	abc transporter atp-binding protein
JFP838_RS03415	COG1368	sulfuric ester hydrolase activity
JFP838_RS03420	COG1368	sulfuric ester hydrolase activity
JFP838_RS03425	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JFP838_RS03430	COG4991	sh3 domain protein
JFP838_RS03430	COG0860	N-Acetylmuramoyl-L-alanine amidase
JFP838_RS03430	COG3103	Sh3 type 3 domain protein
JFP838_RS03435	COG1362	aminopeptidase activity
JFP838_RS03445	COG0561	phosphatase activity
JFP838_RS03450	COG2409	Drug exporters of the RND superfamily
JFP838_RS03450	COG1033	growth of symbiont in host cell
JFP838_RS03455	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JFP838_RS03465	COG0561	phosphatase activity
JFP838_RS03490	COG1091	dTDP-4-dehydrorhamnose reductase activity
JFP838_RS03505	COG1216	Glycosyl transferase, family 2
JFP838_RS03510	COG3475	LICD family
JFP838_RS03520	COG4193	domain, Protein
JFP838_RS03520	COG5263	repeat protein
JFP838_RS03550	COG4750	Nucleotidyl transferase
JFP838_RS03560	COG1316	TRANSCRIPTIONal
JFP838_RS03565	COG1114	Component of the transport system for branched-chain amino acids
JFP838_RS03580	COG0641	radical SAM
JFP838_RS03585	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JFP838_RS03590	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JFP838_RS03595	COG0573	inorganic phosphate transmembrane transporter activity
JFP838_RS03600	COG0581	inorganic phosphate transmembrane transporter activity
JFP838_RS03610	COG0704	Plays a role in the regulation of phosphate uptake
JFP838_RS03615	COG0745	RESPONSE REGULATOR receiver
JFP838_RS03630	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JFP838_RS03645	COG0697	spore germination
JFP838_RS03675	COG2357	RelA SpoT domain protein
JFP838_RS03685	COG1126	abc transporter atp-binding protein
JFP838_RS03690	COG3864	Putative metallopeptidase domain
JFP838_RS03705	COG1328	CTP reductase activity
JFP838_RS03710	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JFP838_RS03715	COG1349	DNA-binding transcription factor activity
JFP838_RS03725	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JFP838_RS03820	COG0756	dUTP diphosphatase activity
JFP838_RS03825	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
JFP838_RS03830	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JFP838_RS03835	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JFP838_RS03840	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JFP838_RS03845	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JFP838_RS03855	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JFP838_RS03865	COG0151	Belongs to the GarS family
JFP838_RS03880	COG1592	Rubrerythrin
JFP838_RS03880	COG1773	rubredoxin
JFP838_RS03885	COG0165	Argininosuccinate lyase
JFP838_RS03900	COG3291	Pkd domain containing protein
JFP838_RS03900	COG3525	Glycosyl hydrolase, family 20, catalytic domain
JFP838_RS03905	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
JFP838_RS03910	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JFP838_RS03920	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JFP838_RS03930	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JFP838_RS03965	COG4152	abc transporter atp-binding protein
JFP838_RS03970	COG1668	transmembrane transport
JFP838_RS03980	COG1522	sequence-specific DNA binding
JFP838_RS03985	COG0436	Aminotransferase
JFP838_RS04000	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JFP838_RS04010	COG1595	DNA-templated transcription, initiation
JFP838_RS04020	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JFP838_RS04025	COG1216	Glycosyl transferase, family 2
JFP838_RS04030	COG0628	permease
JFP838_RS04040	COG1349	DNA-binding transcription factor activity
JFP838_RS04045	COG0561	phosphatase activity
JFP838_RS04050	COG1533	DNA photolyase activity
JFP838_RS04065	COG3620	sequence-specific DNA binding
JFP838_RS04070	COG4221	oxidoreductase activity
JFP838_RS04090	COG0446	pyridine nucleotide-disulphide oxidoreductase
JFP838_RS04110	COG5566	PFAM Mor transcription activator
JFP838_RS04115	COG3118	belongs to the thioredoxin family
JFP838_RS04125	COG0785	Cytochrome C biogenesis protein
JFP838_RS04130	COG0657	acetylesterase activity
JFP838_RS04140	COG1309	transcriptional regulator
JFP838_RS04195	COG0402	S-adenosylhomocysteine deaminase activity
JFP838_RS04200	COG1402	creatininase
JFP838_RS04205	COG0697	spore germination
JFP838_RS04210	COG2508	Transcriptional regulator
JFP838_RS04220	COG0242	peptide deformylase activity
JFP838_RS04230	COG1011	Hydrolase
JFP838_RS04245	COG0789	Transcriptional regulator
JFP838_RS04245	COG4978	Transcriptional regulator
JFP838_RS04260	COG2211	Major facilitator Superfamily
JFP838_RS04265	COG2207	Transcriptional regulator
JFP838_RS04270	COG3250	beta-galactosidase activity
JFP838_RS04275	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JFP838_RS04275	COG0723	plastoquinol--plastocyanin reductase activity
JFP838_RS04280	COG2610	gluconate transmembrane transporter activity
JFP838_RS04285	COG2267	carboxylic ester hydrolase activity
JFP838_RS04290	COG0017	Asparaginyl-tRNA synthetase
JFP838_RS04295	COG1396	sequence-specific DNA binding
JFP838_RS04305	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
JFP838_RS04310	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JFP838_RS04355	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JFP838_RS04370	COG1846	Transcriptional regulator
JFP838_RS04380	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JFP838_RS04385	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JFP838_RS04390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JFP838_RS04395	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JFP838_RS04400	COG1120	ATPase activity
JFP838_RS04405	COG0494	nUDIX hydrolase
JFP838_RS04440	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JFP838_RS04460	COG3681	Belongs to the UPF0597 family
JFP838_RS04480	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JFP838_RS04485	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JFP838_RS04490	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JFP838_RS04495	COG1120	ATPase activity
JFP838_RS04520	COG3525	Glycosyl hydrolase, family 20, catalytic domain
JFP838_RS04520	COG3291	Pkd domain containing protein
JFP838_RS04540	COG0561	phosphatase activity
JFP838_RS04550	COG3715	PTS system
JFP838_RS04555	COG3716	PTS system mannose fructose sorbose family IID component
JFP838_RS04590	COG2340	Cysteine-rich secretory protein family
JFP838_RS04605	COG3402	PFAM membrane-flanked domain
JFP838_RS04620	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JFP838_RS04625	COG0534	Mate efflux family protein
JFP838_RS04630	COG0745	RESPONSE REGULATOR receiver
JFP838_RS04635	COG2205	protein histidine kinase activity
JFP838_RS04640	COG3177	Filamentation induced by cAMP protein fic
JFP838_RS04655	COG1136	(ABC) transporter
JFP838_RS04660	COG0577	efflux transmembrane transporter activity
JFP838_RS04690	COG1592	Rubrerythrin
JFP838_RS04705	COG1979	alcohol dehydrogenase
JFP838_RS04710	COG3835	regulator
JFP838_RS04715	COG2610	gluconate transmembrane transporter activity
JFP838_RS04720	COG1929	Belongs to the glycerate kinase type-1 family
JFP838_RS04740	COG0534	Mate efflux family protein
JFP838_RS04765	COG3290	protein histidine kinase activity
JFP838_RS04775	COG0006	proline dipeptidase activity
JFP838_RS04785	COG2309	aminopeptidase activity
JFP838_RS04795	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JFP838_RS04800	COG3153	acetyltransferase
JFP838_RS04810	COG3525	Glycosyl hydrolase, family 20, catalytic domain
JFP838_RS04810	COG3291	Pkd domain containing protein
JFP838_RS04815	COG0393	Putative heavy-metal-binding
JFP838_RS04825	COG1131	(ABC) transporter
JFP838_RS04840	COG2226	methyltransferase
JFP838_RS04845	COG0494	nUDIX hydrolase
JFP838_RS04885	COG4819	ethanolamine utilization protein
JFP838_RS04890	COG4303	Ethanolamine ammonia lyase large subunit
JFP838_RS04895	COG4302	ethanolamine ammonia-lyase activity
JFP838_RS04900	COG4816	utilization protein
JFP838_RS04910	COG1454	alcohol dehydrogenase
JFP838_RS04910	COG1012	belongs to the aldehyde dehydrogenase family
JFP838_RS04925	COG4869	propanediol catabolic process
JFP838_RS04935	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
JFP838_RS04945	COG3192	ethanolamine utilization protein
JFP838_RS04955	COG0386	Belongs to the glutathione peroxidase family
JFP838_RS04970	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JFP838_RS04980	COG0640	Transcriptional regulator
JFP838_RS04985	COG5658	integral membrane protein
JFP838_RS05000	COG1328	CTP reductase activity
JFP838_RS05000	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JFP838_RS05075	COG5377	YqaJ viral recombinase family
JFP838_RS05080	COG3723	Recombinational DNA repair protein, rece pathway
JFP838_RS05130	COG3728	DNA packaging
JFP838_RS05130	COG5484	DNA packaging
JFP838_RS05325	COG1266	CAAX protease self-immunity
JFP838_RS05345	COG1401	restriction endodeoxyribonuclease activity
JFP838_RS05375	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JFP838_RS05390	COG1266	CAAX protease self-immunity
JFP838_RS05410	COG1473	amidohydrolase
JFP838_RS05415	COG4166	transmembrane transport
JFP838_RS05420	COG0601	transmembrane transport
JFP838_RS05425	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JFP838_RS05430	COG0444	Belongs to the ABC transporter superfamily
JFP838_RS05435	COG4608	Belongs to the ABC transporter superfamily
JFP838_RS05460	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JFP838_RS05470	COG1695	Transcriptional regulator
JFP838_RS05490	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
JFP838_RS05545	COG0084	hydrolase, TatD family'
JFP838_RS05575	COG1191	sigma factor activity
JFP838_RS05625	COG1846	Transcriptional regulator
JFP838_RS05630	COG0494	nUDIX hydrolase
JFP838_RS05700	COG1454	alcohol dehydrogenase
JFP838_RS05710	COG2407	Converts the aldose L-fucose into the corresponding ketose L-fuculose
JFP838_RS05715	COG1070	Carbohydrate kinase
JFP838_RS05725	COG0235	Class ii aldolase
JFP838_RS05730	COG0738	Major facilitator superfamily
JFP838_RS05750	COG0745	RESPONSE REGULATOR receiver
JFP838_RS05755	COG3850	Histidine kinase
JFP838_RS05755	COG5002	protein histidine kinase activity
JFP838_RS05760	COG0561	phosphatase activity
JFP838_RS05770	COG0588	phosphoglycerate mutase activity
JFP838_RS05790	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JFP838_RS05805	COG3546	catalase activity
JFP838_RS05815	COG1263	PTS System
JFP838_RS05815	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JFP838_RS05850	COG1653	transport
JFP838_RS05895	COG1523	belongs to the glycosyl hydrolase 13 family
JFP838_RS05920	COG1595	DNA-templated transcription, initiation
JFP838_RS05930	COG1131	(ABC) transporter
JFP838_RS05985	COG3119	arylsulfatase activity
JFP838_RS05990	COG3976	FMN-binding domain protein
JFP838_RS05990	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
JFP838_RS06035	COG3594	Acyltransferase
JFP838_RS06040	COG2207	Transcriptional regulator
JFP838_RS06045	COG2972	Histidine kinase
JFP838_RS06055	COG1175	transmembrane transport
JFP838_RS06060	COG0395	ABC-type sugar transport system, permease component
JFP838_RS06125	COG1151	hydroxylamine reductase activity
JFP838_RS06175	COG0745	RESPONSE REGULATOR receiver
JFP838_RS06180	COG5002	protein histidine kinase activity
JFP838_RS06205	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JFP838_RS06220	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JFP838_RS06230	COG1187	pseudouridine synthase activity
JFP838_RS06245	COG1028	Short-chain dehydrogenase reductase Sdr
JFP838_RS06255	COG1285	pathogenesis
JFP838_RS06275	COG0586	Pfam SNARE associated Golgi protein
JFP838_RS06300	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
JFP838_RS06300	COG2199	diguanylate cyclase activity
JFP838_RS06325	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JFP838_RS06330	COG3275	phosphorelay sensor kinase activity
JFP838_RS06335	COG2197	response regulator
JFP838_RS06380	COG0531	amino acid
JFP838_RS06385	COG3976	FMN-binding domain protein
JFP838_RS06385	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
JFP838_RS06405	COG2267	carboxylic ester hydrolase activity
JFP838_RS06420	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JFP838_RS06425	COG1823	symporter activity
JFP838_RS06430	COG0745	RESPONSE REGULATOR receiver
JFP838_RS06445	COG5002	protein histidine kinase activity
JFP838_RS06455	COG2081	HI0933 family
JFP838_RS06465	COG1136	(ABC) transporter
JFP838_RS06475	COG0577	efflux transmembrane transporter activity
JFP838_RS06490	COG1051	belongs to the nudix hydrolase family
JFP838_RS06500	COG1846	Transcriptional regulator
JFP838_RS06505	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
JFP838_RS06510	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
JFP838_RS06515	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
JFP838_RS06520	COG2205	protein histidine kinase activity
JFP838_RS06525	COG0745	RESPONSE REGULATOR receiver
JFP838_RS06535	COG0531	amino acid
JFP838_RS06540	COG3706	GGDEF domain
JFP838_RS06540	COG2203	Gaf domain
JFP838_RS06540	COG5001	Diguanylate cyclase
JFP838_RS06540	COG4251	negative regulation of phosphorylation
JFP838_RS06690	COG5484	DNA packaging
JFP838_RS06690	COG3728	DNA packaging
JFP838_RS06765	COG1234	tRNA 3'-trailer cleavage
JFP838_RS06835	COG0569	domain protein
JFP838_RS06835	COG0475	glutathione-regulated potassium exporter activity
JFP838_RS06850	COG2706	6-phosphogluconolactonase activity
JFP838_RS06865	COG3158	transport of potassium into the cell
JFP838_RS06875	COG1917	Cupin 2, conserved barrel domain protein
JFP838_RS06875	COG2207	Transcriptional regulator
JFP838_RS06895	COG0697	spore germination
JFP838_RS06900	COG1288	antiporter activity
JFP838_RS06905	COG5002	protein histidine kinase activity
JFP838_RS06910	COG0037	tRNA processing
JFP838_RS06920	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JFP838_RS06930	COG1363	Peptidase, m42
JFP838_RS07170	COG0598	Magnesium transport protein CorA
JFP838_RS07175	COG1362	aminopeptidase activity
JFP838_RS07200	COG0251	oxidation-reduction process
JFP838_RS07210	COG0426	domain, Protein
JFP838_RS07215	COG0613	PHP domain protein
JFP838_RS07220	COG0512	Glutamine amidotransferase of anthranilate synthase
JFP838_RS07220	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JFP838_RS07230	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JFP838_RS07235	COG0302	gtp cyclohydrolase
JFP838_RS07245	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JFP838_RS07250	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JFP838_RS07250	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JFP838_RS07270	COG0671	phosphoesterase, PA-phosphatase related
JFP838_RS07275	COG1653	transport
JFP838_RS07280	COG1993	acr, cog1993
JFP838_RS07285	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JFP838_RS07295	COG0640	Transcriptional regulator
JFP838_RS07300	COG1473	amidohydrolase
JFP838_RS07310	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
JFP838_RS07320	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
JFP838_RS07340	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JFP838_RS07345	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JFP838_RS07350	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JFP838_RS07355	COG1120	ATPase activity
JFP838_RS07365	COG1492	cobalamin metabolic process
JFP838_RS07370	COG1151	hydroxylamine reductase activity
JFP838_RS07375	COG3525	Glycosyl hydrolase, family 20, catalytic domain
JFP838_RS07375	COG3291	Pkd domain containing protein
JFP838_RS07395	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JFP838_RS07400	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JFP838_RS07405	COG2897	thiosulfate sulfurtransferase activity
JFP838_RS07425	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JFP838_RS07435	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JFP838_RS07435	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
JFP838_RS07455	COG4659	FMN binding
JFP838_RS07460	COG4660	Part of a membrane complex involved in electron transport
JFP838_RS07465	COG4657	Part of a membrane complex involved in electron transport
JFP838_RS07470	COG1245	4Fe-4S binding domain
JFP838_RS07470	COG2878	Part of a membrane complex involved in electron transport
JFP838_RS07480	COG1846	Transcriptional regulator
JFP838_RS07485	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JFP838_RS07490	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JFP838_RS07495	COG1028	Short-chain dehydrogenase reductase Sdr
JFP838_RS07500	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JFP838_RS07505	COG0511	ligase activity, forming carbon-carbon bonds
JFP838_RS07515	COG0439	Biotin carboxylase
JFP838_RS07520	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JFP838_RS07525	COG0825	malonyl-CoA metabolic process
JFP838_RS07545	COG1187	pseudouridine synthase activity
JFP838_RS07550	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JFP838_RS07565	COG2081	HI0933 family
JFP838_RS07570	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JFP838_RS07575	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JFP838_RS07580	COG0456	acetyltransferase
JFP838_RS07605	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JFP838_RS07610	COG0427	acetyl-CoA hydrolase
JFP838_RS07615	COG1892	Catalyzes the irreversible beta-carboxylation of phosphoenolpyruvate (PEP) to form oxaloacetate (OAA), a four- carbon dicarboxylic acid source for the tricarboxylic acid cycle
JFP838_RS07635	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
JFP838_RS07640	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
JFP838_RS07650	COG2301	Belongs to the HpcH HpaI aldolase family
JFP838_RS07665	COG0281	malic enzyme
JFP838_RS07690	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JFP838_RS07695	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JFP838_RS07700	COG1923	regulation of RNA biosynthetic process
JFP838_RS07705	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
JFP838_RS07715	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JFP838_RS07725	COG4974	Belongs to the 'phage' integrase family
JFP838_RS07735	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JFP838_RS07770	COG0833	amino acid
JFP838_RS07775	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
JFP838_RS07785	COG2364	Membrane
JFP838_RS07810	COG0708	Exodeoxyribonuclease III
JFP838_RS07835	COG0167	dihydroorotate dehydrogenase activity
JFP838_RS07860	COG0540	Belongs to the ATCase OTCase family
JFP838_RS07880	COG1482	cell wall glycoprotein biosynthetic process
JFP838_RS07885	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JFP838_RS07890	COG3442	glutamine amidotransferase
JFP838_RS07965	COG0534	Mate efflux family protein
JFP838_RS07995	COG0564	pseudouridine synthase activity
JFP838_RS08000	COG1473	amidohydrolase
JFP838_RS08005	COG0210	DNA helicase
JFP838_RS08010	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JFP838_RS08020	COG0735	belongs to the Fur family
JFP838_RS08025	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JFP838_RS08030	COG2233	PERMEase
JFP838_RS08035	COG1120	ATPase activity
JFP838_RS08040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JFP838_RS08085	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
JFP838_RS08100	COG1388	LysM domain
JFP838_RS08100	COG3584	3D domain protein
JFP838_RS08110	COG3103	Sh3 type 3 domain protein
JFP838_RS08310	COG4974	Belongs to the 'phage' integrase family
JFP838_RS08325	COG3291	Pkd domain containing protein
JFP838_RS08325	COG3525	Glycosyl hydrolase, family 20, catalytic domain
JFP838_RS08330	COG3525	Glycosyl hydrolase, family 20, catalytic domain
JFP838_RS08330	COG3291	Pkd domain containing protein
JFP838_RS08345	COG2814	Major facilitator Superfamily
JFP838_RS08350	COG2239	Acts as a magnesium transporter
JFP838_RS08360	COG1278	Cold shock
JFP838_RS08370	COG1376	ErfK ybiS ycfS ynhG family protein
JFP838_RS08390	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JFP838_RS08390	COG0392	lysyltransferase activity
JFP838_RS08395	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JFP838_RS08395	COG0392	lysyltransferase activity
JFP838_RS08425	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JFP838_RS08425	COG0493	'glutamate synthase
JFP838_RS08445	COG4991	sh3 domain protein
JFP838_RS08445	COG0860	N-Acetylmuramoyl-L-alanine amidase
JFP838_RS08445	COG3103	Sh3 type 3 domain protein
JFP838_RS08510	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JFP838_RS08515	COG3291	Pkd domain containing protein
JFP838_RS08515	COG3525	Glycosyl hydrolase, family 20, catalytic domain
JFP838_RS08530	COG3250	beta-galactosidase activity
JFP838_RS08535	COG0402	S-adenosylhomocysteine deaminase activity
JFP838_RS08540	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JFP838_RS08555	COG1177	transmembrane transport
JFP838_RS08560	COG1176	ABC-type spermidine putrescine transport system, permease component I
JFP838_RS08605	COG2188	Transcriptional regulator
JFP838_RS08610	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JFP838_RS08615	COG1289	transmembrane transporter activity
JFP838_RS08620	COG1846	Transcriptional regulator
JFP838_RS08635	COG0446	pyridine nucleotide-disulphide oxidoreductase
JFP838_RS08635	COG1902	pentaerythritol trinitrate reductase activity
JFP838_RS08645	COG2211	Major facilitator Superfamily
JFP838_RS08660	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JFP838_RS08695	COG0557	exoribonuclease II activity
JFP838_RS08715	COG0531	amino acid
JFP838_RS08720	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JFP838_RS08735	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JFP838_RS08740	COG2390	Transcriptional regulator
JFP838_RS08745	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JFP838_RS08760	COG1744	ABC transporter substrate-binding protein PnrA-like
JFP838_RS08775	COG0561	phosphatase activity
JFP838_RS08780	COG2720	vancomycin resistance protein
JFP838_RS08795	COG5002	protein histidine kinase activity
JFP838_RS08805	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JFP838_RS08815	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JFP838_RS08820	COG1045	serine acetyltransferase
JFP838_RS08825	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JFP838_RS08830	COG2239	Acts as a magnesium transporter
JFP838_RS08835	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JFP838_RS08840	COG0765	amino acid transport
JFP838_RS08855	COG1597	lipid kinase activity
JFP838_RS08860	COG1183	phosphatidylcholine synthase activity
JFP838_RS08870	COG1592	Rubrerythrin
JFP838_RS08875	COG2719	SpoVR family
JFP838_RS08880	COG2718	Belongs to the UPF0229 family
JFP838_RS08885	COG2766	serine protein kinase
JFP838_RS08890	COG0514	ATP-dependent DNA helicase (RecQ)
JFP838_RS08900	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JFP838_RS08905	COG0351	phosphomethylpyrimidine kinase
JFP838_RS08915	COG1609	Transcriptional regulator
JFP838_RS08925	COG1129	ABC transporter
JFP838_RS08940	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JFP838_RS08945	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
JFP838_RS08950	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JFP838_RS08955	COG2323	membrane
JFP838_RS08985	COG0791	NLP P60 protein
JFP838_RS08985	COG0741	lytic transglycosylase activity
JFP838_RS09000	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JFP838_RS09005	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JFP838_RS09030	COG1234	tRNA 3'-trailer cleavage
JFP838_RS09035	COG3525	Glycosyl hydrolase, family 20, catalytic domain
JFP838_RS09035	COG3291	Pkd domain containing protein
JFP838_RS09070	COG0733	neurotransmitter:sodium symporter activity
JFP838_RS09080	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JFP838_RS09110	COG1876	peptidase activity
JFP838_RS09130	COG0024	Methionine aminopeptidase
JFP838_RS09165	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JFP838_RS09170	COG1067	ATP-dependent peptidase activity
JFP838_RS09170	COG0470	DNA polymerase III
JFP838_RS09175	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JFP838_RS09185	COG0544	peptidyl-prolyl cis-trans isomerase activity
JFP838_RS09205	COG0813	purine-nucleoside phosphorylase activity
JFP838_RS09240	COG0860	N-Acetylmuramoyl-L-alanine amidase
JFP838_RS09255	COG4656	Part of a membrane complex involved in electron transport
JFP838_RS09260	COG4658	electron transport chain
JFP838_RS09270	COG0301	tRNA thio-modification
JFP838_RS09275	COG1104	cysteine desulfurase activity
JFP838_RS09285	COG0383	alpha-mannosidase activity
JFP838_RS09290	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JFP838_RS09295	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JFP838_RS09295	COG0646	methionine synthase
JFP838_RS09305	COG1115	amino acid carrier protein
JFP838_RS09315	COG4684	Psort location CytoplasmicMembrane, score
JFP838_RS09320	COG3191	aminopeptidase activity
JFP838_RS09360	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JFP838_RS09365	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JFP838_RS09370	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JFP838_RS09375	COG0113	porphobilinogen synthase activity
JFP838_RS09385	COG0181	hydroxymethylbilane synthase activity
JFP838_RS09435	COG2207	Transcriptional regulator
JFP838_RS09435	COG1917	Cupin 2, conserved barrel domain protein
JFP838_RS09450	COG0328	RNA-DNA hybrid ribonuclease activity
JFP838_RS09465	COG1164	Oligoendopeptidase f
JFP838_RS09490	COG1121	(ABC) transporter
JFP838_RS09495	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JFP838_RS09500	COG0534	Mate efflux family protein
JFP838_RS09515	COG3716	PTS system mannose fructose sorbose family IID component
JFP838_RS09520	COG3715	PTS system
JFP838_RS09535	COG0205	6-phosphofructokinase activity
JFP838_RS09545	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JFP838_RS09550	COG0488	(ABC) transporter
JFP838_RS09555	COG0756	dUTP diphosphatase activity
JFP838_RS09570	COG1272	protein, Hemolysin III
JFP838_RS09575	COG0583	DNA-binding transcription factor activity
JFP838_RS09600	COG0659	secondary active sulfate transmembrane transporter activity
JFP838_RS09605	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JFP838_RS09605	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
JFP838_RS09620	COG1116	anion transmembrane transporter activity
JFP838_RS09645	COG0730	response to heat
JFP838_RS09655	COG0586	Pfam SNARE associated Golgi protein
JFP838_RS09660	COG0586	Pfam SNARE associated Golgi protein
JFP838_RS09665	COG0037	tRNA processing
JFP838_RS09675	COG2848	UPF0210 protein
JFP838_RS09685	COG0658	competence protein
JFP838_RS09685	COG2333	competence protein COMEC
JFP838_RS09695	COG3279	Response regulator of the LytR AlgR family
JFP838_RS09710	COG3583	domain protein
JFP838_RS09710	COG3584	3D domain protein
JFP838_RS09720	COG0488	(ABC) transporter
JFP838_RS09725	COG0726	polysaccharide deacetylase
JFP838_RS09755	COG2205	protein histidine kinase activity
JFP838_RS09755	COG0784	Response regulator, receiver
JFP838_RS09785	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JFP838_RS09795	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JFP838_RS09810	COG3291	Pkd domain containing protein
JFP838_RS09810	COG3525	Glycosyl hydrolase, family 20, catalytic domain
JFP838_RS09815	COG1132	(ABC) transporter
JFP838_RS09820	COG1132	(ABC) transporter
JFP838_RS09845	COG5298	Protein conserved in bacteria
JFP838_RS09855	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JFP838_RS09860	COG1621	beta-fructofuranosidase activity
JFP838_RS09865	COG1609	Transcriptional regulator
JFP838_RS09900	COG0577	efflux transmembrane transporter activity
JFP838_RS09905	COG1136	(ABC) transporter
JFP838_RS09905	COG0577	efflux transmembrane transporter activity
JFP838_RS09915	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
JFP838_RS09920	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JFP838_RS09930	COG4086	secreted protein
JFP838_RS09935	COG0464	growth
JFP838_RS09940	COG0243	molybdopterin cofactor binding
JFP838_RS09960	COG1523	belongs to the glycosyl hydrolase 13 family
JFP838_RS09985	COG4129	membrane
JFP838_RS09990	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JFP838_RS09995	COG1233	COG1233 Phytoene dehydrogenase and related
JFP838_RS10000	COG2199	diguanylate cyclase activity
JFP838_RS10000	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
JFP838_RS10035	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JFP838_RS10040	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JFP838_RS10050	COG0561	phosphatase activity
JFP838_RS10080	COG2252	PERMEase
JFP838_RS10090	COG1079	Belongs to the binding-protein-dependent transport system permease family
JFP838_RS10095	COG4603	Belongs to the binding-protein-dependent transport system permease family
JFP838_RS10100	COG3845	ABC transporter
JFP838_RS10105	COG1744	ABC transporter substrate-binding protein PnrA-like
JFP838_RS10125	COG4720	Psort location CytoplasmicMembrane, score
JFP838_RS10130	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JFP838_RS10135	COG3328	transposase activity
JFP838_RS10145	COG1523	belongs to the glycosyl hydrolase 13 family
JFP838_RS10150	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JFP838_RS10175	COG0392	lysyltransferase activity
JFP838_RS10175	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JFP838_RS10180	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JFP838_RS10185	COG3458	cephalosporin-C deacetylase activity
JFP838_RS10205	COG0352	thiamine-phosphate diphosphorylase activity
JFP838_RS10230	COG2814	Major facilitator Superfamily
JFP838_RS10245	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JFP838_RS10260	COG0726	polysaccharide deacetylase
JFP838_RS10270	COG0398	Pfam SNARE associated Golgi protein
JFP838_RS10280	COG0741	lytic transglycosylase activity
JFP838_RS10280	COG0739	heme binding
JFP838_RS10280	COG1196	nuclear chromosome segregation
JFP838_RS10310	COG3973	AAA domain
JFP838_RS10350	COG1879	ABC-type sugar transport system periplasmic component
JFP838_RS10355	COG1172	Belongs to the binding-protein-dependent transport system permease family
JFP838_RS10360	COG1129	ABC transporter
JFP838_RS10365	COG1869	D-ribose catabolic process
JFP838_RS10380	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JFP838_RS10415	COG1390	Produces ATP from ADP in the presence of a proton gradient across the membrane
JFP838_RS10420	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JFP838_RS10425	COG1269	ATP hydrolysis coupled proton transport
JFP838_RS10450	COG2244	polysaccharide biosynthetic process
JFP838_RS10480	COG1522	sequence-specific DNA binding
JFP838_RS10485	COG2155	Conserved Protein
JFP838_RS10495	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JFP838_RS10530	COG1994	Peptidase M50
JFP838_RS10535	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
JFP838_RS10555	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JFP838_RS10565	COG2359	stage V sporulation protein S
JFP838_RS10570	COG1418	mRNA catabolic process
JFP838_RS10580	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JFP838_RS10585	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JFP838_RS10595	COG0740	serine-type endopeptidase activity
JFP838_RS10600	COG0527	aspartate kinase activity
JFP838_RS10620	COG0196	riboflavin kinase activity
JFP838_RS10630	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
JFP838_RS10650	COG2740	Nucleic-acid-binding protein implicated in transcription termination
JFP838_RS10655	COG0195	Participates in both transcription termination and antitermination
JFP838_RS10660	COG0779	Required for maturation of 30S ribosomal subunits
JFP838_RS10690	COG4377	Putative membrane peptidase family (DUF2324)
JFP838_RS10700	COG3279	Response regulator of the LytR AlgR family
JFP838_RS10705	COG4589	Belongs to the CDS family
JFP838_RS10720	COG0528	UMP kinase activity
JFP838_RS10725	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JFP838_RS10740	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JFP838_RS10745	COG0758	DNA mediated transformation
JFP838_RS10750	COG0606	chelatase, subunit chli
JFP838_RS10755	COG0792	nuclease activity
JFP838_RS10760	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JFP838_RS10765	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JFP838_RS10770	COG0335	large ribosomal subunit rRNA binding
JFP838_RS10775	COG0336	Belongs to the RNA methyltransferase TrmD family
JFP838_RS10780	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JFP838_RS10795	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JFP838_RS10805	COG0552	protein localization to endoplasmic reticulum
JFP838_RS10830	COG0416	fatty acid biosynthetic process
JFP838_RS10850	COG0280	phosphate acetyltransferase
JFP838_RS10875	COG0742	ribosomal rna small subunit methyltransferase
JFP838_RS10880	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JFP838_RS10885	COG1461	Dihydroxyacetone kinase
JFP838_RS10895	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JFP838_RS10905	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JFP838_RS10910	COG1162	GTPase activity
JFP838_RS10920	COG0631	protein serine/threonine phosphatase activity
JFP838_RS10925	COG0820	rRNA (adenine-C2-)-methyltransferase activity
JFP838_RS10930	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JFP838_RS10930	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JFP838_RS10935	COG2738	Putative neutral zinc metallopeptidase
JFP838_RS10950	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JFP838_RS10955	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JFP838_RS10965	COG0194	GDP metabolic process
JFP838_RS10975	COG1561	YicC-like family, N-terminal region
JFP838_RS10980	COG2252	PERMEase
JFP838_RS10990	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JFP838_RS10995	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JFP838_RS11005	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JFP838_RS11010	COG5002	protein histidine kinase activity
JFP838_RS11015	COG1496	oxidoreductase activity
JFP838_RS11020	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JFP838_RS11025	COG1873	PFAM PRC-barrel domain
JFP838_RS11030	COG1191	sigma factor activity
JFP838_RS11035	COG1191	sigma factor activity
JFP838_RS11045	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JFP838_RS11070	COG0572	uridine kinase
JFP838_RS11075	COG0826	peptidase U32
JFP838_RS11080	COG4122	O-methyltransferase activity
JFP838_RS11085	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JFP838_RS11090	COG1217	gtp-binding protein TYPA
JFP838_RS11095	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JFP838_RS11100	COG0735	belongs to the Fur family
JFP838_RS11125	COG0628	permease
JFP838_RS11135	COG0482	sulfurtransferase activity
JFP838_RS11140	COG0822	iron-sulfur transferase activity
JFP838_RS11150	COG1959	2 iron, 2 sulfur cluster binding
JFP838_RS11155	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JFP838_RS11180	COG0746	molybdenum cofactor guanylyltransferase activity
JFP838_RS11205	COG0243	molybdopterin cofactor binding
JFP838_RS11215	COG2081	HI0933 family
JFP838_RS11225	COG1686	Belongs to the peptidase S11 family
JFP838_RS11235	COG3874	Sporulation protein YtfJ
JFP838_RS11240	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JFP838_RS11245	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JFP838_RS11250	COG1686	Belongs to the peptidase S11 family
JFP838_RS11255	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JFP838_RS11260	COG4974	Belongs to the 'phage' integrase family
JFP838_RS11270	COG0494	nUDIX hydrolase
JFP838_RS11280	COG0745	RESPONSE REGULATOR receiver
JFP838_RS11285	COG0750	zinc metalloprotease
JFP838_RS11290	COG0497	DNA recombination
JFP838_RS11305	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
JFP838_RS11310	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JFP838_RS11315	COG0142	geranyltranstransferase activity
JFP838_RS11325	COG1570	exodeoxyribonuclease VII activity
JFP838_RS11330	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JFP838_RS11335	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JFP838_RS11340	COG1302	Protein conserved in bacteria
JFP838_RS11380	COG3854	ATPases associated with a variety of cellular activities
JFP838_RS11430	COG1459	type II secretion system
JFP838_RS11435	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JFP838_RS11450	COG1293	RNA-binding protein homologous to eukaryotic snRNP
JFP838_RS11455	COG0116	Belongs to the methyltransferase superfamily
JFP838_RS11465	COG0564	pseudouridine synthase activity
JFP838_RS11470	COG3599	regulation of cell shape
JFP838_RS11485	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JFP838_RS11495	COG3856	small basic protein
JFP838_RS11510	COG0772	Belongs to the SEDS family
JFP838_RS11520	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JFP838_RS11545	COG0012	GTP binding
JFP838_RS11575	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JFP838_RS11605	COG1683	Conserved Protein
JFP838_RS11610	COG0768	penicillin binding
JFP838_RS11615	COG1193	negative regulation of DNA recombination
JFP838_RS11620	COG0826	peptidase U32
JFP838_RS11625	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JFP838_RS11645	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JFP838_RS11650	COG0569	domain protein
JFP838_RS11655	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JFP838_RS11690	COG0494	nUDIX hydrolase
JFP838_RS11725	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JFP838_RS11740	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JFP838_RS11750	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
JFP838_RS11755	COG0436	Aminotransferase
JFP838_RS11760	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
JFP838_RS11765	COG2171	N-acyltransferase activity
JFP838_RS11775	COG0726	polysaccharide deacetylase
JFP838_RS11785	COG0628	permease
JFP838_RS11795	COG1272	protein, Hemolysin III
JFP838_RS11805	COG0038	chloride channel
JFP838_RS11810	COG0285	dihydrofolate synthase activity
JFP838_RS11835	COG0612	Peptidase, M16
JFP838_RS11840	COG0745	RESPONSE REGULATOR receiver
JFP838_RS11845	COG5002	protein histidine kinase activity
JFP838_RS11850	COG1028	Short-chain dehydrogenase reductase Sdr
JFP838_RS11860	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JFP838_RS11865	COG2966	Psort location CytoplasmicMembrane, score
JFP838_RS11875	COG1937	Protein conserved in bacteria
JFP838_RS11880	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JFP838_RS11885	COG0124	histidyl-tRNA synthetase
JFP838_RS11890	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JFP838_RS11895	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JFP838_RS11905	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JFP838_RS11920	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JFP838_RS11925	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JFP838_RS11940	COG1862	Preprotein translocase
JFP838_RS11950	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JFP838_RS11955	COG2255	four-way junction helicase activity
JFP838_RS11970	COG0737	Belongs to the 5'-nucleotidase family
JFP838_RS11975	COG0737	Belongs to the 5'-nucleotidase family
JFP838_RS12000	COG1739	Uncharacterized protein family UPF0029
JFP838_RS12005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JFP838_RS12020	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JFP838_RS12025	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JFP838_RS12035	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JFP838_RS12040	COG1115	amino acid carrier protein
JFP838_RS12060	COG3842	ATPase activity
JFP838_RS12070	COG1177	transmembrane transport
JFP838_RS12080	COG0105	UTP biosynthetic process
JFP838_RS12095	COG1686	Belongs to the peptidase S11 family
JFP838_RS12105	COG2502	aspartate--ammonia ligase
JFP838_RS12120	COG1346	cytolysis
JFP838_RS12140	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
JFP838_RS12145	COG5002	protein histidine kinase activity
JFP838_RS12150	COG5002	protein histidine kinase activity
JFP838_RS12160	COG2267	carboxylic ester hydrolase activity
JFP838_RS12190	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JFP838_RS12190	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JFP838_RS12215	COG5434	Belongs to the glycosyl hydrolase 28 family
JFP838_RS12215	COG4632	Exopolysaccharide biosynthesis protein
JFP838_RS12250	COG2384	SAM-dependent methyltransferase
JFP838_RS12260	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JFP838_RS12265	COG0358	DNA primase activity
JFP838_RS12270	COG0232	Belongs to the dGTPase family. Type 2 subfamily
JFP838_RS12280	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JFP838_RS12280	COG0574	Belongs to the PEP-utilizing enzyme family
JFP838_RS12285	COG0517	IMP dehydrogenase activity
JFP838_RS12310	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JFP838_RS12315	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JFP838_RS12320	COG1480	7TM receptor with intracellular HD hydrolase
JFP838_RS12335	COG1610	YqeY-like protein
JFP838_RS12345	COG0537	adenosine 5'-monophosphoramidase activity
JFP838_RS12350	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JFP838_RS12355	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JFP838_RS12370	COG1725	Transcriptional regulator
JFP838_RS12385	COG1131	(ABC) transporter
JFP838_RS12400	COG1131	(ABC) transporter
JFP838_RS12415	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JFP838_RS12425	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JFP838_RS12450	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
JFP838_RS12475	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JFP838_RS12490	COG2172	sigma factor antagonist activity
JFP838_RS12500	COG1067	ATP-dependent peptidase activity
JFP838_RS12505	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JFP838_RS12515	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JFP838_RS12535	COG0076	glutamate decarboxylase activity
JFP838_RS12545	COG0531	amino acid
JFP838_RS12560	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JFP838_RS12570	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
JFP838_RS12570	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JFP838_RS12575	COG0612	Peptidase, M16
JFP838_RS12585	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JFP838_RS12590	COG0187	DNA topoisomerase II activity
JFP838_RS12595	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
JFP838_RS12610	COG1971	Probably functions as a manganese efflux pump
JFP838_RS12615	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JFP838_RS12620	COG0531	amino acid
JFP838_RS12645	COG0383	alpha-mannosidase activity
JFP838_RS12650	COG0395	ABC-type sugar transport system, permease component
JFP838_RS12655	COG4209	transmembrane transport
JFP838_RS12660	COG0315	cyclic pyranopterin monophosphate synthase activity
JFP838_RS12665	COG4149	molybdate abc transporter
JFP838_RS12670	COG0725	ABC transporter, periplasmic molybdate-binding protein
JFP838_RS12675	COG0521	Mo-molybdopterin cofactor biosynthetic process
JFP838_RS12680	COG4753	response regulator
JFP838_RS12680	COG2207	Transcriptional regulator
JFP838_RS12685	COG2972	Histidine kinase
JFP838_RS12695	COG2348	transferase activity, transferring amino-acyl groups
JFP838_RS12700	COG1695	Transcriptional regulator
JFP838_RS12705	COG1126	abc transporter atp-binding protein
JFP838_RS12735	COG2205	protein histidine kinase activity
JFP838_RS12740	COG0745	RESPONSE REGULATOR receiver
JFP838_RS12750	COG1550	Protein conserved in bacteria
JFP838_RS12760	COG2264	protein methyltransferase activity
JFP838_RS12775	COG1477	protein flavinylation
JFP838_RS12805	COG1404	Belongs to the peptidase S8 family
JFP838_RS12845	COG0709	Synthesizes selenophosphate from selenide and ATP
JFP838_RS12850	COG1555	photosystem II stabilization
JFP838_RS12850	COG1596	polysaccharide export
JFP838_RS12855	COG1686	Belongs to the peptidase S11 family
JFP838_RS12860	COG0564	pseudouridine synthase activity
JFP838_RS12865	COG1316	TRANSCRIPTIONal
JFP838_RS12870	COG1713	HD superfamily hydrolase involved in NAD metabolism
JFP838_RS12875	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JFP838_RS12880	COG1534	Rna-binding protein
JFP838_RS12905	COG1530	ribonuclease E activity
JFP838_RS12920	COG1994	Peptidase M50
JFP838_RS12930	COG0772	Belongs to the SEDS family
JFP838_RS12935	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
JFP838_RS12940	COG2894	cell division
JFP838_RS12950	COG0768	penicillin binding
JFP838_RS12950	COG0768	penicillin binding
JFP838_RS12965	COG1077	Cell shape determining protein MreB Mrl
JFP838_RS12975	COG0424	maF-like protein
JFP838_RS12985	COG0613	PHP domain protein
JFP838_RS12990	COG2195	Cleaves the N-terminal amino acid of tripeptides
JFP838_RS13000	COG0539	negative regulation of cytoplasmic translation
JFP838_RS13035	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JFP838_RS13035	COG1263	PTS System
JFP838_RS13035	COG2190	(PTS) system
JFP838_RS13040	COG0803	Belongs to the bacterial solute-binding protein 9 family
JFP838_RS13045	COG4717	serine-type aminopeptidase activity
JFP838_RS13075	COG0517	IMP dehydrogenase activity
JFP838_RS13080	COG0802	atpase or kinase
JFP838_RS13085	COG1214	PFAM Peptidase M22, glycoprotease
JFP838_RS13090	COG0456	acetyltransferase
JFP838_RS13095	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JFP838_RS13100	COG2183	response to ionizing radiation
JFP838_RS13105	COG2234	aminopeptidase activity
JFP838_RS13110	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JFP838_RS13115	COG0653	protein targeting
JFP838_RS13135	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JFP838_RS13200	COG1609	Transcriptional regulator
JFP838_RS13210	COG2385	sporulation resulting in formation of a cellular spore
JFP838_RS13230	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JFP838_RS13240	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JFP838_RS13245	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JFP838_RS13250	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JFP838_RS13255	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JFP838_RS13260	COG0356	it plays a direct role in the translocation of protons across the membrane
JFP838_RS13270	COG0183	Belongs to the thiolase family
JFP838_RS13275	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JFP838_RS13280	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JFP838_RS13285	COG0698	ribose 5-phosphate isomerase
JFP838_RS13290	COG0009	L-threonylcarbamoyladenylate synthase
JFP838_RS13310	COG1435	thymidine kinase activity
JFP838_RS13320	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JFP838_RS13325	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JFP838_RS13335	COG4506	Protein conserved in bacteria
JFP838_RS13340	COG0482	sulfurtransferase activity
JFP838_RS13350	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JFP838_RS13360	COG4242	Belongs to the peptidase S51 family
JFP838_RS13370	COG4466	Protein conserved in bacteria
JFP838_RS13380	COG3642	lipopolysaccharide core region biosynthetic process
JFP838_RS13385	COG0438	transferase activity, transferring glycosyl groups
JFP838_RS13420	COG4939	FMN-binding domain protein
JFP838_RS13430	COG3192	ethanolamine utilization protein
JFP838_RS13440	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JFP838_RS13450	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JFP838_RS13470	COG0425	Belongs to the sulfur carrier protein TusA family
JFP838_RS13475	COG1368	sulfuric ester hydrolase activity
JFP838_RS13485	COG5002	protein histidine kinase activity
JFP838_RS13485	COG3850	Histidine kinase
JFP838_RS13490	COG0745	RESPONSE REGULATOR receiver
JFP838_RS13535	COG2195	Cleaves the N-terminal amino acid of tripeptides
JFP838_RS13665	COG0747	negative chemotaxis
JFP838_RS13680	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JFP838_RS13705	COG1187	pseudouridine synthase activity
JFP838_RS13715	COG1671	Belongs to the UPF0178 family
JFP838_RS13720	COG0166	Belongs to the GPI family
JFP838_RS13730	COG4608	Belongs to the ABC transporter superfamily
JFP838_RS13735	COG0444	Belongs to the ABC transporter superfamily
JFP838_RS13740	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JFP838_RS13745	COG0601	transmembrane transport
JFP838_RS13795	COG1674	ftsk spoiiie
JFP838_RS13820	COG0517	IMP dehydrogenase activity
JFP838_RS13820	COG0516	GMP reductase activity
JFP838_RS13865	COG1459	type II secretion system
JFP838_RS13870	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JFP838_RS13875	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
JFP838_RS13900	COG1403	HNH endonuclease
JFP838_RS13915	COG0681	Belongs to the peptidase S26 family
JFP838_RS13920	COG1132	(ABC) transporter
JFP838_RS13925	COG1250	3-hydroxyacyl-CoA dehydrogenase
JFP838_RS13935	COG2086	electron transfer activity
JFP838_RS13940	COG1960	acyl-CoA dehydrogenase activity
JFP838_RS13945	COG1024	Enoyl-CoA hydratase
JFP838_RS13950	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JFP838_RS13955	COG2217	Heavy metal translocating P-type atpase
JFP838_RS13980	COG0662	Cupin 2, conserved barrel domain protein
JFP838_RS13980	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
JFP838_RS13985	COG2723	6-phospho-beta-galactosidase activity
JFP838_RS13990	COG1012	belongs to the aldehyde dehydrogenase family
JFP838_RS14000	COG1073	alpha beta
JFP838_RS14005	COG1187	pseudouridine synthase activity
JFP838_RS14015	COG3764	Sortase (surface protein transpeptidase)
JFP838_RS14020	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
JFP838_RS14025	COG1757	Na H antiporter
JFP838_RS14085	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JFP838_RS14095	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JFP838_RS14115	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JFP838_RS14125	COG5002	protein histidine kinase activity
JFP838_RS14130	COG0745	RESPONSE REGULATOR receiver
JFP838_RS14140	COG4496	protein, YerC YecD
JFP838_RS14155	COG0058	SHG alpha-glucan phosphorylase activity
JFP838_RS14175	COG3833	ABC-type maltose transport systems, permease component
JFP838_RS14180	COG1175	transmembrane transport
JFP838_RS14185	COG2182	Extracellular solute-binding protein
JFP838_RS14190	COG3835	regulator
JFP838_RS14195	COG3842	ATPase activity
JFP838_RS14205	COG3426	butyrate kinase activity
JFP838_RS14210	COG0280	phosphate acetyltransferase
JFP838_RS14215	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
JFP838_RS14225	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JFP838_RS14245	COG3118	belongs to the thioredoxin family
JFP838_RS14250	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JFP838_RS14255	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JFP838_RS14260	COG3290	protein histidine kinase activity
JFP838_RS14260	COG3829	transcription factor binding
JFP838_RS14265	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JFP838_RS14270	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JFP838_RS14275	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JFP838_RS14280	COG1393	Belongs to the ArsC family
JFP838_RS14285	COG5002	protein histidine kinase activity
JFP838_RS14295	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JFP838_RS14300	COG0860	N-Acetylmuramoyl-L-alanine amidase
JFP838_RS14325	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JFP838_RS14330	COG1122	ATPase activity
JFP838_RS14335	COG1122	ATPase activity
JFP838_RS14350	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JFP838_RS14390	COG0201	protein transport
JFP838_RS14435	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JFP838_RS14445	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JFP838_RS14485	COG0088	Forms part of the polypeptide exit tunnel
JFP838_RS14490	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JFP838_RS14520	COG1358	cellular component organization or biogenesis
JFP838_RS14560	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JFP838_RS14590	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JFP838_RS14610	COG0442	prolyl-tRNA aminoacylation
JFP838_RS14615	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
JFP838_RS14620	COG4956	integral membrane protein (PIN domain superfamily)
JFP838_RS14635	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JFP838_RS14645	COG2188	Transcriptional regulator
JFP838_RS14655	COG1012	belongs to the aldehyde dehydrogenase family
JFP838_RS14675	COG0542	response to heat
JFP838_RS14680	COG3869	Catalyzes the specific phosphorylation of arginine residues in
JFP838_RS14695	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JFP838_RS14710	COG1774	PSP1 C-terminal conserved region
JFP838_RS14715	COG0470	DNA polymerase III
JFP838_RS14720	COG3870	Protein conserved in bacteria
JFP838_RS14725	COG0194	GDP metabolic process
JFP838_RS14730	COG1982	Orn Lys Arg decarboxylase major
JFP838_RS14755	COG1619	proteins homologs of microcin C7 resistance protein MccF
JFP838_RS14810	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JFP838_RS14820	COG1619	proteins homologs of microcin C7 resistance protein MccF
JFP838_RS14825	COG2195	Cleaves the N-terminal amino acid of tripeptides
JFP838_RS14850	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JFP838_RS14865	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JFP838_RS14870	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JFP838_RS14875	COG0037	tRNA processing
JFP838_RS14920	COG1098	S1 RNA binding domain
JFP838_RS14940	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JFP838_RS14950	COG3956	TIGRFAM MazG family protein
JFP838_RS14955	COG2244	polysaccharide biosynthetic process
JFP838_RS14960	COG2002	toxin-antitoxin pair type II binding
JFP838_RS14970	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JFP838_RS14975	COG0193	aminoacyl-tRNA hydrolase activity
JFP838_RS14980	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JFP838_RS14985	COG2205	protein histidine kinase activity
JFP838_RS14990	COG0745	RESPONSE REGULATOR receiver
JFP838_RS15000	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JFP838_RS15005	COG2088	sporulation resulting in formation of a cellular spore
JFP838_RS15010	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JFP838_RS15030	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JFP838_RS15035	COG0006	proline dipeptidase activity
JFP838_RS15075	COG0534	Mate efflux family protein
JFP838_RS15085	COG1328	CTP reductase activity
JFP838_RS15090	COG1470	cell adhesion involved in biofilm formation
JFP838_RS15100	COG1695	Transcriptional regulator
JFP838_RS15140	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JFP838_RS15145	COG3583	domain protein
JFP838_RS15145	COG3584	3D domain protein
JFP838_RS15150	COG0084	hydrolase, TatD family'
JFP838_RS15165	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JFP838_RS15185	COG1757	Na H antiporter
JFP838_RS15210	COG0700	Nucleoside recognition
JFP838_RS15215	COG2715	membrane protein required for spore maturation
JFP838_RS15270	COG0488	(ABC) transporter
JFP838_RS15290	COG0446	pyridine nucleotide-disulphide oxidoreductase
JFP838_RS15300	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JFP838_RS15305	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
JFP838_RS15310	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JFP838_RS15320	COG2045	Belongs to the ComB family
JFP838_RS15325	COG1242	4 iron, 4 sulfur cluster binding
JFP838_RS15335	COG3949	Membrane
JFP838_RS15370	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JFP838_RS15385	COG0174	glutamine synthetase
JFP838_RS15400	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JFP838_RS15425	COG1447	Phosphotransferase system cellobiose-specific component IIA
JFP838_RS15430	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JFP838_RS15440	COG1028	Short-chain dehydrogenase reductase Sdr
JFP838_RS15445	COG0300	oxidoreductase activity
JFP838_RS15465	COG3314	Sporulation integral membrane protein YlbJ
JFP838_RS15475	COG0110	maltose O-acetyltransferase activity
JFP838_RS15480	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JFP838_RS15500	COG2824	Alkylphosphonate utilization operon protein PhnA
JFP838_RS15520	COG1028	Short-chain dehydrogenase reductase Sdr
JFP838_RS15540	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JFP838_RS15615	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JFP838_RS15680	COG0653	protein targeting
JFP838_RS15690	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JFP838_RS15720	COG1196	nuclear chromosome segregation
JFP838_RS15720	COG0741	lytic transglycosylase activity
JFP838_RS15720	COG0739	heme binding
JFP838_RS15790	COG2081	HI0933 family
JFP838_RS15805	COG1592	Rubrerythrin
JFP838_RS15805	COG1773	rubredoxin
JFP838_RS15815	COG0494	nUDIX hydrolase
JFP838_RS15825	COG1760	l-serine dehydratase
JFP838_RS15830	COG1760	l-serine dehydratase
JFP838_RS15835	COG2222	sugar isomerase
JFP838_RS15845	COG2188	Transcriptional regulator
JFP838_RS15860	COG3716	PTS system mannose fructose sorbose family IID component
JFP838_RS15865	COG3715	PTS system
JFP838_RS15875	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JFP838_RS15880	COG0305	Participates in initiation and elongation during chromosome replication
JFP838_RS15885	COG1067	ATP-dependent peptidase activity
JFP838_RS15885	COG0470	DNA polymerase III
JFP838_RS15895	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
JFP838_RS15900	COG4241	membrane
JFP838_RS15930	COG0668	transmembrane transport
JFP838_RS15945	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JFP838_RS15950	COG0628	permease
JFP838_RS15965	COG1475	DNA binding
JFP838_RS15970	COG1192	Involved in chromosome partitioning
JFP838_RS15975	COG0357	Ribosomal RNA small subunit methyltransferase G
JFP838_RS15985	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JFP838_RS15990	COG1847	R3H domain protein
JFP838_RS16415	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JFP838_RS16475	COG1615	UPF0182 protein
JFP838_RS16515	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
JFP838_RS16730	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JFP838_RS16770	COG1615	UPF0182 protein
JFP838_RS16895	COG4536	flavin adenine dinucleotide binding
JFP838_RS17090	COG1840	ABC-type Fe3 transport system, periplasmic component
JFP838_RS17285	COG1263	PTS System
JFP838_RS17285	COG2190	(PTS) system
JFP838_RS17285	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JFP838_RS17350	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JFP838_RS17540	COG2376	Dihydroxyacetone kinase
JFP838_RS18190	COG1122	ATPase activity
JFP838_RS18495	COG2207	Transcriptional regulator
JFP838_RS18945	COG0426	domain, Protein
JFP838_RS19005	COG3409	Peptidoglycan-binding domain 1 protein
JFP838_RS19005	COG0793	Belongs to the peptidase S41A family