locus-tag class description CLO1100_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CLO1100_RS00005 PF11638 DnaA N-terminal domain CLO1100_RS00005 PF00308 Bacterial dnaA protein CLO1100_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CLO1100_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CLO1100_RS00010 PF02767 DNA polymerase III beta subunit, central domain CLO1100_RS00020 PF02463 RecF/RecN/SMC N terminal domain CLO1100_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus CLO1100_RS00030 PF01751 Toprim domain CLO1100_RS00030 PF00204 DNA gyrase B CLO1100_RS00035 PF13614 AAA domain CLO1100_RS00040 PF02195 ParB-like nuclease domain CLO1100_RS00040 PF17762 HTH domain found in ParB protein CLO1100_RS00065 PF01066 CDP-alcohol phosphatidyltransferase CLO1100_RS00070 PF13419 Haloacid dehalogenase-like hydrolase CLO1100_RS00090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLO1100_RS00090 PF10371 Domain of unknown function CLO1100_RS00090 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLO1100_RS00090 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLO1100_RS00090 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLO1100_RS00105 PF01268 Formate--tetrahydrofolate ligase CLO1100_RS00120 PF01476 LysM domain CLO1100_RS00125 PF08544 GHMP kinases C terminal CLO1100_RS00125 PF00288 GHMP kinases N terminal domain CLO1100_RS00130 PF00392 Bacterial regulatory proteins, gntR family CLO1100_RS00130 PF07729 FCD domain CLO1100_RS00135 PF00004 ATPase family associated with various cellular activities (AAA) CLO1100_RS00135 PF01434 Peptidase family M41 CLO1100_RS00135 PF17862 AAA+ lid domain CLO1100_RS00165 PF01648 4'-phosphopantetheinyl transferase superfamily CLO1100_RS00170 PF00149 Calcineurin-like phosphoesterase CLO1100_RS00175 PF13514 AAA domain CLO1100_RS00180 PF00877 NlpC/P60 family CLO1100_RS00185 PF00534 Glycosyl transferases group 1 CLO1100_RS00185 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CLO1100_RS00190 PF01471 Putative peptidoglycan binding domain CLO1100_RS00190 PF07486 Cell Wall Hydrolase CLO1100_RS00195 PF14620 YpeB sporulation CLO1100_RS00200 PF01047 MarR family CLO1100_RS00210 PF01327 Polypeptide deformylase CLO1100_RS00215 PF00398 Ribosomal RNA adenine dimethylase CLO1100_RS00240 PF00909 Ammonium Transporter Family CLO1100_RS00245 PF00210 Ferritin-like domain CLO1100_RS00250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLO1100_RS00255 PF00005 ABC transporter CLO1100_RS00255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLO1100_RS00260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLO1100_RS00260 PF00005 ABC transporter CLO1100_RS00265 PF12911 N-terminal TM domain of oligopeptide transport permease C CLO1100_RS00265 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS00270 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS00275 PF00672 HAMP domain CLO1100_RS00275 PF12729 Four helix bundle sensory module for signal transduction CLO1100_RS00275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS00285 PF00781 Diacylglycerol kinase catalytic domain CLO1100_RS00290 PF12320 Type 5 capsule protein repressor C-terminal domain CLO1100_RS00290 PF00149 Calcineurin-like phosphoesterase CLO1100_RS00295 PF13476 AAA domain CLO1100_RS00300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLO1100_RS00300 PF02806 Alpha amylase, C-terminal all-beta domain CLO1100_RS00300 PF00128 Alpha amylase, catalytic domain CLO1100_RS00305 PF13407 Periplasmic binding protein domain CLO1100_RS00315 PF00258 Flavodoxin CLO1100_RS00325 PF01250 Ribosomal protein S6 CLO1100_RS00330 PF00436 Single-strand binding protein family CLO1100_RS00335 PF01084 Ribosomal protein S18 CLO1100_RS00340 PF00072 Response regulator receiver domain CLO1100_RS00340 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS00360 PF00800 Prephenate dehydratase CLO1100_RS00360 PF01817 Chorismate mutase type II CLO1100_RS00360 PF01842 ACT domain CLO1100_RS00370 PF02272 DHHA1 domain CLO1100_RS00370 PF01368 DHH family CLO1100_RS00375 PF03948 Ribosomal protein L9, C-terminal domain CLO1100_RS00375 PF01281 Ribosomal protein L9, N-terminal domain CLO1100_RS00380 PF00772 DnaB-like helicase N terminal domain CLO1100_RS00380 PF03796 DnaB-like helicase C terminal domain CLO1100_RS00385 PF11734 TilS substrate C-terminal domain CLO1100_RS00385 PF01171 PP-loop family CLO1100_RS00390 PF00156 Phosphoribosyl transferase domain CLO1100_RS00395 PF01434 Peptidase family M41 CLO1100_RS00395 PF06480 FtsH Extracellular CLO1100_RS00395 PF00004 ATPase family associated with various cellular activities (AAA) CLO1100_RS00395 PF17862 AAA+ lid domain CLO1100_RS00405 PF02772 S-adenosylmethionine synthetase, central domain CLO1100_RS00405 PF02773 S-adenosylmethionine synthetase, C-terminal domain CLO1100_RS00405 PF00438 S-adenosylmethionine synthetase, N-terminal domain CLO1100_RS00415 PF13538 UvrD-like helicase C-terminal domain CLO1100_RS00415 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CLO1100_RS00415 PF14490 Helix-hairpin-helix containing domain CLO1100_RS00420 PF00156 Phosphoribosyl transferase domain CLO1100_RS00440 PF00460 Flagella basal body rod protein CLO1100_RS00440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLO1100_RS00445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLO1100_RS00445 PF07196 Flagellin hook IN motif CLO1100_RS00450 PF00669 Bacterial flagellin N-terminal helical region CLO1100_RS00450 PF00700 Bacterial flagellin C-terminal helical region CLO1100_RS00460 PF02623 FliW protein CLO1100_RS00465 PF02599 Global regulator protein family CLO1100_RS00470 PF00669 Bacterial flagellin N-terminal helical region CLO1100_RS00470 PF00700 Bacterial flagellin C-terminal helical region CLO1100_RS00480 PF03646 FlaG protein CLO1100_RS00490 PF02561 Flagellar protein FliS CLO1100_RS00555 PF01047 MarR family CLO1100_RS00560 PF00255 Glutathione peroxidase CLO1100_RS00565 PF04055 Radical SAM superfamily CLO1100_RS00565 PF13186 Iron-sulfur cluster-binding domain CLO1100_RS00570 PF00005 ABC transporter CLO1100_RS00570 PF16326 ABC transporter C-terminal domain CLO1100_RS00570 PF12848 ABC transporter CLO1100_RS00575 PF00270 DEAD/DEAH box helicase CLO1100_RS00575 PF00271 Helicase conserved C-terminal domain CLO1100_RS00580 PF02311 AraC-like ligand binding domain CLO1100_RS00580 PF12833 Helix-turn-helix domain CLO1100_RS00585 PF00330 Aconitase family (aconitate hydratase) CLO1100_RS00590 PF00694 Aconitase C-terminal domain CLO1100_RS00595 PF00180 Isocitrate/isopropylmalate dehydrogenase CLO1100_RS00600 PF00857 Isochorismatase family CLO1100_RS00610 PF02557 D-alanyl-D-alanine carboxypeptidase CLO1100_RS00620 PF03575 Peptidase family S51 CLO1100_RS00625 PF08443 RimK-like ATP-grasp domain CLO1100_RS00625 PF02875 Mur ligase family, glutamate ligase domain CLO1100_RS00625 PF08245 Mur ligase middle domain CLO1100_RS00635 PF08279 HTH domain CLO1100_RS00635 PF02237 Biotin protein ligase C terminal domain CLO1100_RS00635 PF03099 Biotin/lipoate A/B protein ligase family CLO1100_RS00645 PF03309 Type III pantothenate kinase CLO1100_RS00650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLO1100_RS00650 PF00056 lactate/malate dehydrogenase, NAD binding domain CLO1100_RS00655 PF03949 Malic enzyme, NAD binding domain CLO1100_RS00655 PF00390 Malic enzyme, N-terminal domain CLO1100_RS00660 PF01232 Mannitol dehydrogenase Rossmann domain CLO1100_RS00660 PF08125 Mannitol dehydrogenase C-terminal domain CLO1100_RS00665 PF03786 D-mannonate dehydratase (UxuA) CLO1100_RS00670 PF07477 Glycosyl hydrolase family 67 C-terminus CLO1100_RS00670 PF07488 Glycosyl hydrolase family 67 middle domain CLO1100_RS00670 PF03648 Glycosyl hydrolase family 67 N-terminus CLO1100_RS00675 PF01523 Putative modulator of DNA gyrase CLO1100_RS00685 PF12833 Helix-turn-helix domain CLO1100_RS00685 PF07883 Cupin domain CLO1100_RS00690 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS00695 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS00700 PF01547 Bacterial extracellular solute-binding protein CLO1100_RS00705 PF02743 Cache domain CLO1100_RS00705 PF06580 Histidine kinase CLO1100_RS00705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS00705 PF00672 HAMP domain CLO1100_RS00710 PF12833 Helix-turn-helix domain CLO1100_RS00710 PF00072 Response regulator receiver domain CLO1100_RS00720 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS00725 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS00735 PF00072 Response regulator receiver domain CLO1100_RS00735 PF12833 Helix-turn-helix domain CLO1100_RS00740 PF02743 Cache domain CLO1100_RS00740 PF00672 HAMP domain CLO1100_RS00740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS00740 PF06580 Histidine kinase CLO1100_RS00745 PF00072 Response regulator receiver domain CLO1100_RS00745 PF12833 Helix-turn-helix domain CLO1100_RS00755 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS00760 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS00770 PF00703 Glycosyl hydrolases family 2 CLO1100_RS00770 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CLO1100_RS00770 PF02929 Beta galactosidase small chain CLO1100_RS00770 PF02837 Glycosyl hydrolases family 2, sugar binding domain CLO1100_RS00770 PF16353 Domain of unknown function(DUF4981) CLO1100_RS00775 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLO1100_RS00775 PF01276 Orn/Lys/Arg decarboxylase, major domain CLO1100_RS00780 PF02223 Thymidylate kinase CLO1100_RS00785 PF06153 Cyclic-di-AMP receptor CLO1100_RS00795 PF09115 DNA polymerase III, delta subunit, C terminal CLO1100_RS00800 PF04468 PSP1 C-terminal conserved region CLO1100_RS00805 PF00037 4Fe-4S binding domain CLO1100_RS00810 PF05175 Methyltransferase small domain CLO1100_RS00815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLO1100_RS00820 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLO1100_RS00820 PF18277 AbrB C-terminal domain CLO1100_RS00825 PF07670 Nucleoside recognition CLO1100_RS00830 PF07670 Nucleoside recognition CLO1100_RS00840 PF01026 TatD related DNase CLO1100_RS00850 PF03990 G5-linked-Ubiquitin-like domain CLO1100_RS00850 PF06725 3D domain CLO1100_RS00850 PF07501 G5 domain CLO1100_RS00855 PF00398 Ribosomal RNA adenine dimethylase CLO1100_RS00870 PF05164 Cell division protein ZapA CLO1100_RS00875 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CLO1100_RS00875 PF01676 Metalloenzyme superfamily CLO1100_RS00880 PF01136 Peptidase family U32 CLO1100_RS00880 PF12392 Collagenase CLO1100_RS00885 PF00692 dUTPase CLO1100_RS00890 PF13167 GTP-binding GTPase N-terminal CLO1100_RS00890 PF16360 GTP-binding GTPase Middle Region CLO1100_RS00890 PF01926 50S ribosome-binding GTPase CLO1100_RS00900 PF01205 Uncharacterized protein family UPF0029 CLO1100_RS00900 PF09186 Domain of unknown function (DUF1949) CLO1100_RS00905 PF01709 Transcriptional regulator CLO1100_RS00915 PF12833 Helix-turn-helix domain CLO1100_RS00915 PF06445 GyrI-like small molecule binding domain CLO1100_RS00920 PF06445 GyrI-like small molecule binding domain CLO1100_RS00920 PF12833 Helix-turn-helix domain CLO1100_RS00975 PF00664 ABC transporter transmembrane region CLO1100_RS00975 PF00005 ABC transporter CLO1100_RS00990 PF05227 CHASE3 domain CLO1100_RS00990 PF00672 HAMP domain CLO1100_RS00990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS01000 PF01966 HD domain CLO1100_RS01005 PF00005 ABC transporter CLO1100_RS01020 PF17853 GGDEF-like domain CLO1100_RS01020 PF12833 Helix-turn-helix domain CLO1100_RS01025 PF00672 HAMP domain CLO1100_RS01025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS01025 PF06580 Histidine kinase CLO1100_RS01025 PF02743 Cache domain CLO1100_RS01035 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS01040 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS01045 PF14310 Fibronectin type III-like domain CLO1100_RS01045 PF01915 Glycosyl hydrolase family 3 C-terminal domain CLO1100_RS01045 PF07691 PA14 domain CLO1100_RS01045 PF00933 Glycosyl hydrolase family 3 N terminal domain CLO1100_RS01055 PF01588 Putative tRNA binding domain CLO1100_RS01055 PF08264 Anticodon-binding domain of tRNA CLO1100_RS01055 PF09334 tRNA synthetases class I (M) CLO1100_RS01060 PF00860 Permease family CLO1100_RS01065 PF05448 Acetyl xylan esterase (AXE1) CLO1100_RS01075 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CLO1100_RS01075 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CLO1100_RS01080 PF01047 MarR family CLO1100_RS01085 PF02374 Anion-transporting ATPase CLO1100_RS01085 PF17886 HSP20-like domain found in ArsA CLO1100_RS01095 PF17886 HSP20-like domain found in ArsA CLO1100_RS01095 PF02374 Anion-transporting ATPase CLO1100_RS01105 PF02614 Glucuronate isomerase CLO1100_RS01110 PF03190 Protein of unknown function, DUF255 CLO1100_RS01120 PF00145 C-5 cytosine-specific DNA methylase CLO1100_RS01125 PF00881 Nitroreductase family CLO1100_RS01150 PF05175 Methyltransferase small domain CLO1100_RS01155 PF00162 Phosphoglycerate kinase CLO1100_RS01175 PF00392 Bacterial regulatory proteins, gntR family CLO1100_RS01180 PF00005 ABC transporter CLO1100_RS01195 PF00909 Ammonium Transporter Family CLO1100_RS01220 PF01915 Glycosyl hydrolase family 3 C-terminal domain CLO1100_RS01220 PF00933 Glycosyl hydrolase family 3 N terminal domain CLO1100_RS01225 PF00474 Sodium:solute symporter family CLO1100_RS01230 PF00293 NUDIX domain CLO1100_RS01230 PF09297 NADH pyrophosphatase zinc ribbon domain CLO1100_RS01235 PF00759 Glycosyl hydrolase family 9 CLO1100_RS01235 PF00404 Dockerin type I domain CLO1100_RS01235 PF00942 Cellulose binding domain CLO1100_RS01240 PF01738 Dienelactone hydrolase family CLO1100_RS01250 PF00403 Heavy-metal-associated domain CLO1100_RS01260 PF01022 Bacterial regulatory protein, arsR family CLO1100_RS01265 PF05582 YabG peptidase U57 CLO1100_RS01285 PF12169 DNA polymerase III subunits gamma and tau domain III CLO1100_RS01290 PF02575 YbaB/EbfC DNA-binding family CLO1100_RS01295 PF13662 Toprim domain CLO1100_RS01295 PF02132 RecR protein CLO1100_RS01300 PF00672 HAMP domain CLO1100_RS01300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS01300 PF12729 Four helix bundle sensory module for signal transduction CLO1100_RS01305 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS01305 PF00072 Response regulator receiver domain CLO1100_RS01310 PF00989 PAS fold CLO1100_RS01310 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS01310 PF18698 Histidine kinase sensor domain CLO1100_RS01310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS01310 PF00672 HAMP domain CLO1100_RS01315 PF02833 DHHA2 domain CLO1100_RS01315 PF07085 DRTGG domain CLO1100_RS01315 PF00571 CBS domain CLO1100_RS01315 PF01368 DHH family CLO1100_RS01335 PF00571 CBS domain CLO1100_RS01335 PF03471 Transporter associated domain CLO1100_RS01335 PF01595 Cyclin M transmembrane N-terminal domain CLO1100_RS01350 PF00472 RF-1 domain CLO1100_RS01350 PF03462 PCRF domain CLO1100_RS01355 PF02535 ZIP Zinc transporter CLO1100_RS01360 PF01300 Telomere recombination CLO1100_RS01360 PF03481 Putative GTP-binding controlling metal-binding CLO1100_RS01365 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLO1100_RS01370 PF02502 Ribose/Galactose Isomerase CLO1100_RS01380 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLO1100_RS01385 PF02350 UDP-N-acetylglucosamine 2-epimerase CLO1100_RS01390 PF00691 OmpA family CLO1100_RS01390 PF13677 Membrane MotB of proton-channel complex MotA/MotB CLO1100_RS01395 PF01618 MotA/TolQ/ExbB proton channel family CLO1100_RS01405 PF00119 ATP synthase A chain CLO1100_RS01410 PF00137 ATP synthase subunit C CLO1100_RS01415 PF00430 ATP synthase B/B' CF(0) CLO1100_RS01420 PF00213 ATP synthase delta (OSCP) subunit CLO1100_RS01425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLO1100_RS01425 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLO1100_RS01425 PF00306 ATP synthase alpha/beta chain, C terminal domain CLO1100_RS01430 PF00231 ATP synthase CLO1100_RS01435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLO1100_RS01435 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLO1100_RS01440 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CLO1100_RS01440 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CLO1100_RS01495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLO1100_RS01500 PF08486 Stage II sporulation protein CLO1100_RS01510 PF07478 D-ala D-ala ligase C-terminus CLO1100_RS01510 PF01820 D-ala D-ala ligase N-terminus CLO1100_RS01520 PF00750 tRNA synthetases class I (R) CLO1100_RS01520 PF03485 Arginyl tRNA synthetase N terminal domain CLO1100_RS01520 PF05746 DALR anticodon binding domain CLO1100_RS01525 PF01522 Polysaccharide deacetylase CLO1100_RS01525 PF00457 Glycosyl hydrolases family 11 CLO1100_RS01525 PF03422 Carbohydrate binding module (family 6) CLO1100_RS01530 PF17202 Single cache domain 3 CLO1100_RS01530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS01530 PF00672 HAMP domain CLO1100_RS01545 PF01471 Putative peptidoglycan binding domain CLO1100_RS01545 PF03572 Peptidase family S41 CLO1100_RS01545 PF17820 PDZ domain CLO1100_RS01550 PF06418 CTP synthase N-terminus CLO1100_RS01550 PF00117 Glutamine amidotransferase class-I CLO1100_RS01555 PF09551 Stage II sporulation protein R (spore_II_R) CLO1100_RS01560 PF02308 MgtC family CLO1100_RS01565 PF00690 Cation transporter/ATPase, N-terminus CLO1100_RS01565 PF00689 Cation transporting ATPase, C-terminus CLO1100_RS01570 PF00005 ABC transporter CLO1100_RS01605 PF00920 Dehydratase family CLO1100_RS01610 PF00205 Thiamine pyrophosphate enzyme, central domain CLO1100_RS01610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLO1100_RS01610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLO1100_RS01615 PF03880 DbpA RNA binding domain CLO1100_RS01615 PF00270 DEAD/DEAH box helicase CLO1100_RS01615 PF00271 Helicase conserved C-terminal domain CLO1100_RS01620 PF00471 Ribosomal protein L33 CLO1100_RS01625 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CLO1100_RS01630 PF02357 Transcription termination factor nusG CLO1100_RS01630 PF00467 KOW motif CLO1100_RS01635 PF03946 Ribosomal protein L11, N-terminal domain CLO1100_RS01635 PF00298 Ribosomal protein L11, RNA binding domain CLO1100_RS01640 PF00687 Ribosomal protein L1p/L10e family CLO1100_RS01645 PF00466 Ribosomal protein L10 CLO1100_RS01650 PF00542 Ribosomal protein L7/L12 C-terminal domain CLO1100_RS01650 PF16320 Ribosomal protein L7/L12 dimerisation domain CLO1100_RS01655 PF10385 RNA polymerase beta subunit external 1 domain CLO1100_RS01655 PF04561 RNA polymerase Rpb2, domain 2 CLO1100_RS01655 PF00562 RNA polymerase Rpb2, domain 6 CLO1100_RS01655 PF04565 RNA polymerase Rpb2, domain 3 CLO1100_RS01655 PF04560 RNA polymerase Rpb2, domain 7 CLO1100_RS01655 PF04563 RNA polymerase beta subunit CLO1100_RS01660 PF04983 RNA polymerase Rpb1, domain 3 CLO1100_RS01660 PF00623 RNA polymerase Rpb1, domain 2 CLO1100_RS01660 PF04997 RNA polymerase Rpb1, domain 1 CLO1100_RS01660 PF05000 RNA polymerase Rpb1, domain 4 CLO1100_RS01660 PF04998 RNA polymerase Rpb1, domain 5 CLO1100_RS01665 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CLO1100_RS01670 PF00164 Ribosomal protein S12/S23 CLO1100_RS01675 PF00177 Ribosomal protein S7p/S5e CLO1100_RS01680 PF03764 Elongation factor G, domain IV CLO1100_RS01680 PF00679 Elongation factor G C-terminus CLO1100_RS01680 PF00009 Elongation factor Tu GTP binding domain CLO1100_RS01680 PF03144 Elongation factor Tu domain 2 CLO1100_RS01680 PF14492 Elongation Factor G, domain II CLO1100_RS01685 PF03143 Elongation factor Tu C-terminal domain CLO1100_RS01685 PF03144 Elongation factor Tu domain 2 CLO1100_RS01685 PF00009 Elongation factor Tu GTP binding domain CLO1100_RS01690 PF06580 Histidine kinase CLO1100_RS01690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS01690 PF00672 HAMP domain CLO1100_RS01690 PF02743 Cache domain CLO1100_RS01695 PF00072 Response regulator receiver domain CLO1100_RS01695 PF12833 Helix-turn-helix domain CLO1100_RS01705 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS01710 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS01720 PF07385 D-lyxose isomerase CLO1100_RS01725 PF00753 Metallo-beta-lactamase superfamily CLO1100_RS01725 PF00301 Rubredoxin CLO1100_RS01725 PF00258 Flavodoxin CLO1100_RS01740 PF17727 CtsR C-terminal dimerization domain CLO1100_RS01740 PF05848 CtsR N-terminal HTH domain CLO1100_RS01745 PF02151 UvrB/uvrC motif CLO1100_RS01750 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CLO1100_RS01755 PF02861 Clp amino terminal domain, pathogenicity island component CLO1100_RS01755 PF10431 C-terminal, D2-small domain, of ClpB protein CLO1100_RS01755 PF17871 AAA lid domain CLO1100_RS01755 PF07724 AAA domain (Cdc48 subfamily) CLO1100_RS01755 PF00004 ATPase family associated with various cellular activities (AAA) CLO1100_RS01790 PF18073 Rubredoxin metal binding domain CLO1100_RS01795 PF10635 DisA bacterial checkpoint controller linker region CLO1100_RS01795 PF02457 DisA bacterial checkpoint controller nucleotide-binding CLO1100_RS01805 PF02559 CarD-like/TRCF domain CLO1100_RS01815 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLO1100_RS01820 PF00664 ABC transporter transmembrane region CLO1100_RS01820 PF00005 ABC transporter CLO1100_RS01825 PF02542 YgbB family CLO1100_RS01830 PF03129 Anticodon binding domain CLO1100_RS01830 PF09180 Prolyl-tRNA synthetase, C-terminal CLO1100_RS01830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLO1100_RS01835 PF00188 Cysteine-rich secretory protein family CLO1100_RS01840 PF01479 S4 domain CLO1100_RS01840 PF00849 RNA pseudouridylate synthase CLO1100_RS01845 PF00483 Nucleotidyl transferase CLO1100_RS01865 PF03851 UV-endonuclease UvdE CLO1100_RS01870 PF16921 Tex protein YqgF-like domain CLO1100_RS01870 PF09371 Tex-like protein N-terminal domain CLO1100_RS01870 PF00575 S1 RNA binding domain CLO1100_RS01870 PF17674 HHH domain CLO1100_RS01900 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS01905 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS01905 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLO1100_RS01905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS01920 PF02735 Ku70/Ku80 beta-barrel domain CLO1100_RS01925 PF04679 ATP dependent DNA ligase C terminal region CLO1100_RS01925 PF13298 DNA polymerase Ligase (LigD) CLO1100_RS01925 PF01068 ATP dependent DNA ligase domain CLO1100_RS01930 PF01068 ATP dependent DNA ligase domain CLO1100_RS01935 PF16363 GDP-mannose 4,6 dehydratase CLO1100_RS01950 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CLO1100_RS01950 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CLO1100_RS01955 PF00884 Sulfatase CLO1100_RS01960 PF01202 Shikimate kinase CLO1100_RS01965 PF13361 UvrD-like helicase C-terminal domain CLO1100_RS01965 PF00580 UvrD/REP helicase N-terminal domain CLO1100_RS01970 PF00232 Glycosyl hydrolase family 1 CLO1100_RS01995 PF00759 Glycosyl hydrolase family 9 CLO1100_RS01995 PF03442 Carbohydrate binding domain X2 CLO1100_RS01995 PF00942 Cellulose binding domain CLO1100_RS02000 PF13393 Histidyl-tRNA synthetase CLO1100_RS02005 PF01634 ATP phosphoribosyltransferase CLO1100_RS02010 PF00815 Histidinol dehydrogenase CLO1100_RS02015 PF00155 Aminotransferase class I and II CLO1100_RS02020 PF00475 Imidazoleglycerol-phosphate dehydratase CLO1100_RS02025 PF01259 SAICAR synthetase CLO1100_RS02030 PF00117 Glutamine amidotransferase class-I CLO1100_RS02035 PF00977 Histidine biosynthesis protein CLO1100_RS02040 PF00977 Histidine biosynthesis protein CLO1100_RS02045 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CLO1100_RS02045 PF01502 Phosphoribosyl-AMP cyclohydrolase CLO1100_RS02055 PF00166 Chaperonin 10 Kd subunit CLO1100_RS02060 PF00118 TCP-1/cpn60 chaperonin family CLO1100_RS02070 PF00571 CBS domain CLO1100_RS02070 PF00478 IMP dehydrogenase / GMP reductase domain CLO1100_RS02075 PF03449 Transcription elongation factor, N-terminal CLO1100_RS02075 PF01272 Transcription elongation factor, GreA/GreB, C-term CLO1100_RS02080 PF01336 OB-fold nucleic acid binding domain CLO1100_RS02080 PF00152 tRNA synthetases class II (D, K and N) CLO1100_RS02090 PF01740 STAS domain CLO1100_RS02095 PF13581 Histidine kinase-like ATPase domain CLO1100_RS02100 PF04545 Sigma-70, region 4 CLO1100_RS02100 PF04539 Sigma-70 region 3 CLO1100_RS02100 PF04542 Sigma-70 region 2 CLO1100_RS02130 PF00338 Ribosomal protein S10p/S20e CLO1100_RS02135 PF00297 Ribosomal protein L3 CLO1100_RS02140 PF00573 Ribosomal protein L4/L1 family CLO1100_RS02145 PF00276 Ribosomal protein L23 CLO1100_RS02150 PF03947 Ribosomal Proteins L2, C-terminal domain CLO1100_RS02150 PF00181 Ribosomal Proteins L2, RNA binding domain CLO1100_RS02155 PF00203 Ribosomal protein S19 CLO1100_RS02160 PF00237 Ribosomal protein L22p/L17e CLO1100_RS02165 PF07650 KH domain CLO1100_RS02165 PF00189 Ribosomal protein S3, C-terminal domain CLO1100_RS02170 PF00252 Ribosomal protein L16p/L10e CLO1100_RS02175 PF00831 Ribosomal L29 protein CLO1100_RS02180 PF00366 Ribosomal protein S17 CLO1100_RS02185 PF00238 Ribosomal protein L14p/L23e CLO1100_RS02190 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CLO1100_RS02195 PF00673 ribosomal L5P family C-terminus CLO1100_RS02195 PF00281 Ribosomal protein L5 CLO1100_RS02200 PF00253 Ribosomal protein S14p/S29e CLO1100_RS02205 PF00410 Ribosomal protein S8 CLO1100_RS02210 PF00347 Ribosomal protein L6 CLO1100_RS02215 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CLO1100_RS02220 PF00333 Ribosomal protein S5, N-terminal domain CLO1100_RS02220 PF03719 Ribosomal protein S5, C-terminal domain CLO1100_RS02225 PF00327 Ribosomal protein L30p/L7e CLO1100_RS02230 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CLO1100_RS02235 PF00344 SecY translocase CLO1100_RS02240 PF05191 Adenylate kinase, active site lid CLO1100_RS02245 PF00557 Metallopeptidase family M24 CLO1100_RS02255 PF01176 Translation initiation factor 1A / IF-1 CLO1100_RS02260 PF00444 Ribosomal protein L36 CLO1100_RS02265 PF00416 Ribosomal protein S13/S18 CLO1100_RS02270 PF00411 Ribosomal protein S11 CLO1100_RS02275 PF00163 Ribosomal protein S4/S9 N-terminal domain CLO1100_RS02275 PF01479 S4 domain CLO1100_RS02280 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CLO1100_RS02280 PF01000 RNA polymerase Rpb3/RpoA insert domain CLO1100_RS02280 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CLO1100_RS02285 PF01196 Ribosomal protein L17 CLO1100_RS02290 PF00005 ABC transporter CLO1100_RS02295 PF05175 Methyltransferase small domain CLO1100_RS02300 PF00005 ABC transporter CLO1100_RS02305 PF02361 Cobalt transport protein CLO1100_RS02310 PF01416 tRNA pseudouridine synthase CLO1100_RS02315 PF00572 Ribosomal protein L13 CLO1100_RS02320 PF00380 Ribosomal protein S9/S16 CLO1100_RS02325 PF01566 Natural resistance-associated macrophage protein CLO1100_RS02335 PF00698 Acyl transferase domain CLO1100_RS02340 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS02340 PF00550 Phosphopantetheine attachment site CLO1100_RS02340 PF00202 Aminotransferase class-III CLO1100_RS02340 PF00501 AMP-binding enzyme CLO1100_RS02340 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS02340 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS02340 PF00668 Condensation domain CLO1100_RS02340 PF16197 Ketoacyl-synthetase C-terminal extension CLO1100_RS02345 PF14765 Polyketide synthase dehydratase CLO1100_RS02345 PF16197 Ketoacyl-synthetase C-terminal extension CLO1100_RS02345 PF08659 KR domain CLO1100_RS02345 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS02345 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS02345 PF00550 Phosphopantetheine attachment site CLO1100_RS02355 PF14765 Polyketide synthase dehydratase CLO1100_RS02355 PF00550 Phosphopantetheine attachment site CLO1100_RS02355 PF08659 KR domain CLO1100_RS02355 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS02355 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS02355 PF16197 Ketoacyl-synthetase C-terminal extension CLO1100_RS02370 PF00005 ABC transporter CLO1100_RS02385 PF02310 B12 binding domain CLO1100_RS02385 PF04055 Radical SAM superfamily CLO1100_RS02390 PF00668 Condensation domain CLO1100_RS02390 PF00501 AMP-binding enzyme CLO1100_RS02390 PF00550 Phosphopantetheine attachment site CLO1100_RS02390 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS02395 PF00975 Thioesterase domain CLO1100_RS02400 PF00501 AMP-binding enzyme CLO1100_RS02400 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS02400 PF00550 Phosphopantetheine attachment site CLO1100_RS02400 PF00975 Thioesterase domain CLO1100_RS02400 PF00668 Condensation domain CLO1100_RS02405 PF01566 Natural resistance-associated macrophage protein CLO1100_RS02410 PF01325 Iron dependent repressor, N-terminal DNA binding domain CLO1100_RS02410 PF02742 Iron dependent repressor, metal binding and dimerisation domain CLO1100_RS02415 PF01979 Amidohydrolase family CLO1100_RS02420 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CLO1100_RS02425 PF00814 Glycoprotease family CLO1100_RS02430 PF00583 Acetyltransferase (GNAT) family CLO1100_RS02435 PF05362 Lon protease (S16) C-terminal proteolytic domain CLO1100_RS02435 PF13654 AAA domain CLO1100_RS02440 PF08281 Sigma-70, region 4 CLO1100_RS02440 PF04542 Sigma-70 region 2 CLO1100_RS02455 PF00381 PTS HPr component phosphorylation site CLO1100_RS02460 PF08459 UvrC Helix-hairpin-helix N-terminal CLO1100_RS02460 PF01541 GIY-YIG catalytic domain CLO1100_RS02460 PF02151 UvrB/uvrC motif CLO1100_RS02470 PF05697 Bacterial trigger factor protein (TF) CLO1100_RS02470 PF05698 Bacterial trigger factor protein (TF) C-terminus CLO1100_RS02470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLO1100_RS02475 PF00574 Clp protease CLO1100_RS02480 PF07724 AAA domain (Cdc48 subfamily) CLO1100_RS02480 PF10431 C-terminal, D2-small domain, of ClpB protein CLO1100_RS02480 PF06689 ClpX C4-type zinc finger CLO1100_RS02485 PF00004 ATPase family associated with various cellular activities (AAA) CLO1100_RS02485 PF05362 Lon protease (S16) C-terminal proteolytic domain CLO1100_RS02490 PF02687 FtsX-like permease family CLO1100_RS02495 PF00005 ABC transporter CLO1100_RS02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS02505 PF00072 Response regulator receiver domain CLO1100_RS02505 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS02510 PF00565 Staphylococcal nuclease homologue CLO1100_RS02520 PF00814 Glycoprotease family CLO1100_RS02525 PF01464 Transglycosylase SLT domain CLO1100_RS02540 PF02811 PHP domain CLO1100_RS02545 PF01668 SmpB protein CLO1100_RS02560 PF02976 DNA mismatch repair enzyme MutH CLO1100_RS02565 PF00145 C-5 cytosine-specific DNA methylase CLO1100_RS02600 PF01381 Helix-turn-helix CLO1100_RS02620 PF01381 Helix-turn-helix CLO1100_RS02625 PF18277 AbrB C-terminal domain CLO1100_RS02625 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLO1100_RS02650 PF00589 Phage integrase family CLO1100_RS02750 PF08924 Domain of unknown function (DUF1906) CLO1100_RS02750 PF01471 Putative peptidoglycan binding domain CLO1100_RS02775 PF04542 Sigma-70 region 2 CLO1100_RS02775 PF08281 Sigma-70, region 4 CLO1100_RS02785 PF00756 Putative esterase CLO1100_RS02785 PF00404 Dockerin type I domain CLO1100_RS02785 PF00331 Glycosyl hydrolase family 10 CLO1100_RS02785 PF02018 Carbohydrate binding domain CLO1100_RS02795 PF02219 Methylenetetrahydrofolate reductase CLO1100_RS02800 PF17189 Glycosyl hydrolase family 30 beta sandwich domain CLO1100_RS02815 PF00404 Dockerin type I domain CLO1100_RS02815 PF00759 Glycosyl hydrolase family 9 CLO1100_RS02815 PF02018 Carbohydrate binding domain CLO1100_RS02815 PF02927 Cellulase N-terminal ig-like domain CLO1100_RS02825 PF04055 Radical SAM superfamily CLO1100_RS02830 PF01810 LysE type translocator CLO1100_RS02835 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS02835 PF00501 AMP-binding enzyme CLO1100_RS02835 PF00550 Phosphopantetheine attachment site CLO1100_RS02835 PF00975 Thioesterase domain CLO1100_RS02835 PF00668 Condensation domain CLO1100_RS02855 PF00005 ABC transporter CLO1100_RS02870 PF00202 Aminotransferase class-III CLO1100_RS02875 PF00733 Asparagine synthase CLO1100_RS02875 PF13537 Glutamine amidotransferase domain CLO1100_RS02880 PF00975 Thioesterase domain CLO1100_RS02880 PF00550 Phosphopantetheine attachment site CLO1100_RS02880 PF00501 AMP-binding enzyme CLO1100_RS02880 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS02880 PF00668 Condensation domain CLO1100_RS02885 PF02310 B12 binding domain CLO1100_RS02885 PF04055 Radical SAM superfamily CLO1100_RS02895 PF00171 Aldehyde dehydrogenase family CLO1100_RS02905 PF00501 AMP-binding enzyme CLO1100_RS02905 PF00668 Condensation domain CLO1100_RS02905 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS02905 PF00975 Thioesterase domain CLO1100_RS02905 PF00550 Phosphopantetheine attachment site CLO1100_RS02910 PF00550 Phosphopantetheine attachment site CLO1100_RS02915 PF08331 Domain of unknown function (DUF1730) CLO1100_RS02920 PF07687 Peptidase dimerisation domain CLO1100_RS02920 PF01546 Peptidase family M20/M25/M40 CLO1100_RS02935 PF00270 DEAD/DEAH box helicase CLO1100_RS02935 PF00570 HRDC domain CLO1100_RS02935 PF16124 RecQ zinc-binding CLO1100_RS02935 PF00271 Helicase conserved C-terminal domain CLO1100_RS02935 PF09382 RQC domain CLO1100_RS02965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLO1100_RS02965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLO1100_RS02970 PF00171 Aldehyde dehydrogenase family CLO1100_RS02975 PF01042 Endoribonuclease L-PSP CLO1100_RS02985 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLO1100_RS02985 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLO1100_RS02990 PF03734 L,D-transpeptidase catalytic domain CLO1100_RS02995 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLO1100_RS03000 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS03005 PF00005 ABC transporter CLO1100_RS03010 PF01979 Amidohydrolase family CLO1100_RS03015 PF16491 CAAX prenyl protease N-terminal, five membrane helices CLO1100_RS03015 PF01435 Peptidase family M48 CLO1100_RS03030 PF01228 Glycine radical CLO1100_RS03030 PF02901 Pyruvate formate lyase-like CLO1100_RS03035 PF04055 Radical SAM superfamily CLO1100_RS03050 PF10091 Putative glucoamylase CLO1100_RS03050 PF06165 Glycosyltransferase family 36 CLO1100_RS03050 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CLO1100_RS03055 PF00180 Isocitrate/isopropylmalate dehydrogenase CLO1100_RS03060 PF03590 Aspartate-ammonia ligase CLO1100_RS03065 PF01336 OB-fold nucleic acid binding domain CLO1100_RS03065 PF00152 tRNA synthetases class II (D, K and N) CLO1100_RS03075 PF02810 SEC-C motif CLO1100_RS03075 PF07517 SecA DEAD-like domain CLO1100_RS03075 PF07516 SecA Wing and Scaffold domain CLO1100_RS03075 PF01043 SecA preprotein cross-linking domain CLO1100_RS03080 PF00285 Citrate synthase, C-terminal domain CLO1100_RS03085 PF00209 Sodium:neurotransmitter symporter family CLO1100_RS03090 PF00391 PEP-utilising enzyme, mobile domain CLO1100_RS03090 PF02887 Pyruvate kinase, alpha/beta domain CLO1100_RS03090 PF00224 Pyruvate kinase, barrel domain CLO1100_RS03095 PF02190 ATP-dependent protease La (LON) substrate-binding domain CLO1100_RS03095 PF00004 ATPase family associated with various cellular activities (AAA) CLO1100_RS03095 PF05362 Lon protease (S16) C-terminal proteolytic domain CLO1100_RS03115 PF05389 Negative regulator of genetic competence (MecA) CLO1100_RS03120 PF02545 Maf-like protein CLO1100_RS03125 PF04002 RadC-like JAB domain CLO1100_RS03135 PF04085 rod shape-determining protein MreC CLO1100_RS03145 PF03717 Penicillin-binding Protein dimerisation domain CLO1100_RS03145 PF00905 Penicillin binding protein transpeptidase domain CLO1100_RS03150 PF03775 Septum formation inhibitor MinC, C-terminal domain CLO1100_RS03150 PF05209 Septum formation inhibitor MinC, N-terminal domain CLO1100_RS03155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLO1100_RS03160 PF03776 Septum formation topological specificity factor MinE CLO1100_RS03165 PF02142 MGS-like domain CLO1100_RS03175 PF02163 Peptidase family M50 CLO1100_RS03180 PF00175 Oxidoreductase NAD-binding domain CLO1100_RS03180 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLO1100_RS03185 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLO1100_RS03185 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS03205 PF10518 TAT (twin-arginine translocation) pathway signal sequence CLO1100_RS03205 PF00149 Calcineurin-like phosphoesterase CLO1100_RS03210 PF01594 AI-2E family transporter CLO1100_RS03220 PF01925 Sulfite exporter TauE/SafE CLO1100_RS03225 PF01925 Sulfite exporter TauE/SafE CLO1100_RS03230 PF07726 ATPase family associated with various cellular activities (AAA) CLO1100_RS03230 PF17863 AAA lid domain CLO1100_RS03250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLO1100_RS03250 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLO1100_RS03255 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain CLO1100_RS03255 PF01113 Dihydrodipicolinate reductase, N-terminus CLO1100_RS03270 PF00404 Dockerin type I domain CLO1100_RS03270 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1100_RS03290 PF07690 Major Facilitator Superfamily CLO1100_RS03305 PF02743 Cache domain CLO1100_RS03305 PF00672 HAMP domain CLO1100_RS03305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS03310 PF00144 Beta-lactamase CLO1100_RS03325 PF00005 ABC transporter CLO1100_RS03340 PF00149 Calcineurin-like phosphoesterase CLO1100_RS03340 PF02872 5'-nucleotidase, C-terminal domain CLO1100_RS03345 PF00550 Phosphopantetheine attachment site CLO1100_RS03355 PF00501 AMP-binding enzyme CLO1100_RS03355 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS03380 PF00975 Thioesterase domain CLO1100_RS03385 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLO1100_RS03385 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLO1100_RS03415 PF00990 Diguanylate cyclase, GGDEF domain CLO1100_RS03425 PF00248 Aldo/keto reductase family CLO1100_RS03440 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLO1100_RS03455 PF00209 Sodium:neurotransmitter symporter family CLO1100_RS03460 PF00561 alpha/beta hydrolase fold CLO1100_RS03460 PF08386 TAP-like protein CLO1100_RS03500 PF00395 S-layer homology domain CLO1100_RS03500 PF02368 Bacterial Ig-like domain (group 2) CLO1100_RS03500 PF02638 Glycosyl hydrolase-like 10 CLO1100_RS03505 PF01447 Thermolysin metallopeptidase, catalytic domain CLO1100_RS03505 PF07504 Fungalysin/Thermolysin Propeptide Motif CLO1100_RS03505 PF03413 Peptidase propeptide and YPEB domain CLO1100_RS03505 PF02868 Thermolysin metallopeptidase, alpha-helical domain CLO1100_RS03510 PF00271 Helicase conserved C-terminal domain CLO1100_RS03510 PF00270 DEAD/DEAH box helicase CLO1100_RS03520 PF13685 Iron-containing alcohol dehydrogenase CLO1100_RS03525 PF00056 lactate/malate dehydrogenase, NAD binding domain CLO1100_RS03525 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLO1100_RS03530 PF08448 PAS fold CLO1100_RS03530 PF00990 Diguanylate cyclase, GGDEF domain CLO1100_RS03535 PF01814 Hemerythrin HHE cation binding domain CLO1100_RS03540 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS03540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLO1100_RS03545 PF07690 Major Facilitator Superfamily CLO1100_RS03550 PF13419 Haloacid dehalogenase-like hydrolase CLO1100_RS03560 PF06961 Protein of unknown function (DUF1294) CLO1100_RS03565 PF16697 Inner membrane component of T3SS, cytoplasmic domain CLO1100_RS03570 PF01098 Cell cycle protein CLO1100_RS03575 PF00905 Penicillin binding protein transpeptidase domain CLO1100_RS03580 PF02574 Homocysteine S-methyltransferase CLO1100_RS03580 PF02219 Methylenetetrahydrofolate reductase CLO1100_RS03590 PF00501 AMP-binding enzyme CLO1100_RS03595 PF00459 Inositol monophosphatase family CLO1100_RS03600 PF13186 Iron-sulfur cluster-binding domain CLO1100_RS03600 PF04055 Radical SAM superfamily CLO1100_RS03615 PF08769 Sporulation initiation factor Spo0A C terminal CLO1100_RS03615 PF00072 Response regulator receiver domain CLO1100_RS03620 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS03620 PF00989 PAS fold CLO1100_RS03625 PF00488 MutS domain V CLO1100_RS03625 PF05190 MutS family domain IV CLO1100_RS03625 PF01624 MutS domain I CLO1100_RS03625 PF05188 MutS domain II CLO1100_RS03625 PF05192 MutS domain III CLO1100_RS03640 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLO1100_RS03640 PF00037 4Fe-4S binding domain CLO1100_RS03640 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLO1100_RS03645 PF02256 Iron hydrogenase small subunit CLO1100_RS03645 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLO1100_RS03645 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLO1100_RS03645 PF00037 4Fe-4S binding domain CLO1100_RS03650 PF00689 Cation transporting ATPase, C-terminus CLO1100_RS03650 PF00690 Cation transporter/ATPase, N-terminus CLO1100_RS03655 PF01011 PQQ enzyme repeat CLO1100_RS03655 PF13360 PQQ-like domain CLO1100_RS03665 PF10502 Signal peptidase, peptidase S26 CLO1100_RS03695 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS03700 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS03705 PF01055 Glycosyl hydrolases family 31 CLO1100_RS03705 PF13802 Galactose mutarotase-like CLO1100_RS03710 PF01915 Glycosyl hydrolase family 3 C-terminal domain CLO1100_RS03710 PF00933 Glycosyl hydrolase family 3 N terminal domain CLO1100_RS03710 PF14310 Fibronectin type III-like domain CLO1100_RS03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS03715 PF00672 HAMP domain CLO1100_RS03715 PF02743 Cache domain CLO1100_RS03715 PF06580 Histidine kinase CLO1100_RS03720 PF00072 Response regulator receiver domain CLO1100_RS03720 PF12833 Helix-turn-helix domain CLO1100_RS03725 PF02449 Beta-galactosidase CLO1100_RS03725 PF08532 Beta-galactosidase trimerisation domain CLO1100_RS03725 PF08533 Beta-galactosidase C-terminal domain CLO1100_RS03730 PF00291 Pyridoxal-phosphate dependent enzyme CLO1100_RS03740 PF01266 FAD dependent oxidoreductase CLO1100_RS03740 PF00355 Rieske [2Fe-2S] domain CLO1100_RS03745 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CLO1100_RS03750 PF01040 UbiA prenyltransferase family CLO1100_RS03755 PF05193 Peptidase M16 inactive domain CLO1100_RS03755 PF00675 Insulinase (Peptidase family M16) CLO1100_RS03755 PF08367 Peptidase M16C associated CLO1100_RS03760 PF09084 NMT1/THI5 like CLO1100_RS03765 PF00543 Nitrogen regulatory protein P-II CLO1100_RS03775 PF00909 Ammonium Transporter Family CLO1100_RS03780 PF00893 Small Multidrug Resistance protein CLO1100_RS03785 PF00999 Sodium/hydrogen exchanger family CLO1100_RS03790 PF00005 ABC transporter CLO1100_RS03805 PF00733 Asparagine synthase CLO1100_RS03805 PF13537 Glutamine amidotransferase domain CLO1100_RS03810 PF07690 Major Facilitator Superfamily CLO1100_RS03820 PF02796 Helix-turn-helix domain of resolvase CLO1100_RS03820 PF00239 Resolvase, N terminal domain CLO1100_RS03825 PF00733 Asparagine synthase CLO1100_RS03825 PF13537 Glutamine amidotransferase domain CLO1100_RS03830 PF00672 HAMP domain CLO1100_RS03830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS03835 PF00120 Glutamine synthetase, catalytic domain CLO1100_RS03835 PF18318 Glutamine synthetase C-terminal domain CLO1100_RS03835 PF12437 Glutamine synthetase type III N terminal CLO1100_RS03840 PF02934 GatB/GatE catalytic domain CLO1100_RS03840 PF02637 GatB domain CLO1100_RS03845 PF01425 Amidase CLO1100_RS03850 PF02686 Glu-tRNAGln amidotransferase C subunit CLO1100_RS03855 PF00310 Glutamine amidotransferases class-II CLO1100_RS03860 PF13187 4Fe-4S dicluster domain CLO1100_RS03860 PF01645 Conserved region in glutamate synthase CLO1100_RS03865 PF13247 4Fe-4S dicluster domain CLO1100_RS03870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS03880 PF00120 Glutamine synthetase, catalytic domain CLO1100_RS03880 PF03951 Glutamine synthetase, beta-Grasp domain CLO1100_RS03885 PF00072 Response regulator receiver domain CLO1100_RS03885 PF03861 ANTAR domain CLO1100_RS03890 PF00909 Ammonium Transporter Family CLO1100_RS03895 PF00543 Nitrogen regulatory protein P-II CLO1100_RS03900 PF00491 Arginase family CLO1100_RS03910 PF01170 Putative RNA methylase family UPF0020 CLO1100_RS03910 PF10672 S-adenosylmethionine-dependent methyltransferase CLO1100_RS03910 PF02926 THUMP domain CLO1100_RS03915 PF00849 RNA pseudouridylate synthase CLO1100_RS03915 PF01479 S4 domain CLO1100_RS03920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CLO1100_RS03920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLO1100_RS03925 PF01170 Putative RNA methylase family UPF0020 CLO1100_RS03925 PF02926 THUMP domain CLO1100_RS03930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLO1100_RS03935 PF01264 Chorismate synthase CLO1100_RS03940 PF01202 Shikimate kinase CLO1100_RS03945 PF00072 Response regulator receiver domain CLO1100_RS03945 PF08769 Sporulation initiation factor Spo0A C terminal CLO1100_RS03950 PF00216 Bacterial DNA-binding protein CLO1100_RS03960 PF05681 Fumarate hydratase (Fumerase) CLO1100_RS03965 PF05681 Fumarate hydratase (Fumerase) CLO1100_RS03965 PF05683 Fumarase C-terminus CLO1100_RS03975 PF00709 Adenylosuccinate synthetase CLO1100_RS04015 PF01678 Diaminopimelate epimerase CLO1100_RS04020 PF00155 Aminotransferase class I and II CLO1100_RS04025 PF03167 Uracil DNA glycosylase superfamily CLO1100_RS04030 PF03167 Uracil DNA glycosylase superfamily CLO1100_RS04055 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CLO1100_RS04055 PF00437 Type II/IV secretion system protein CLO1100_RS04060 PF00437 Type II/IV secretion system protein CLO1100_RS04065 PF00482 Type II secretion system (T2SS), protein F CLO1100_RS04075 PF06750 Bacterial Peptidase A24 N-terminal domain CLO1100_RS04075 PF01478 Type IV leader peptidase family CLO1100_RS04110 PF07691 PA14 domain CLO1100_RS04110 PF12791 Anti-sigma factor N-terminus CLO1100_RS04120 PF00317 Ribonucleotide reductase, all-alpha domain CLO1100_RS04120 PF03477 ATP cone domain CLO1100_RS04120 PF02867 Ribonucleotide reductase, barrel domain CLO1100_RS04145 PF00404 Dockerin type I domain CLO1100_RS04145 PF00657 GDSL-like Lipase/Acylhydrolase CLO1100_RS04165 PF03061 Thioesterase superfamily CLO1100_RS04185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLO1100_RS04185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLO1100_RS04200 PF14535 AMP-binding enzyme C-terminal domain CLO1100_RS04200 PF00501 AMP-binding enzyme CLO1100_RS04210 PF00291 Pyridoxal-phosphate dependent enzyme CLO1100_RS04215 PF00156 Phosphoribosyl transferase domain CLO1100_RS04220 PF01168 Alanine racemase, N-terminal domain CLO1100_RS04230 PF07690 Major Facilitator Superfamily CLO1100_RS04265 PF00501 AMP-binding enzyme CLO1100_RS04265 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS04265 PF00668 Condensation domain CLO1100_RS04265 PF00550 Phosphopantetheine attachment site CLO1100_RS04270 PF00664 ABC transporter transmembrane region CLO1100_RS04270 PF00005 ABC transporter CLO1100_RS04285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLO1100_RS04285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLO1100_RS04295 PF02770 Acyl-CoA dehydrogenase, middle domain CLO1100_RS04295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLO1100_RS04295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLO1100_RS04300 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS04300 PF00975 Thioesterase domain CLO1100_RS04300 PF00668 Condensation domain CLO1100_RS04300 PF00501 AMP-binding enzyme CLO1100_RS04300 PF00550 Phosphopantetheine attachment site CLO1100_RS04305 PF00698 Acyl transferase domain CLO1100_RS04315 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS04315 PF08659 KR domain CLO1100_RS04315 PF00550 Phosphopantetheine attachment site CLO1100_RS04315 PF14765 Polyketide synthase dehydratase CLO1100_RS04315 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS04315 PF16197 Ketoacyl-synthetase C-terminal extension CLO1100_RS04315 PF00501 AMP-binding enzyme CLO1100_RS04315 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS04315 PF00668 Condensation domain CLO1100_RS04320 PF00202 Aminotransferase class-III CLO1100_RS04320 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS04320 PF16197 Ketoacyl-synthetase C-terminal extension CLO1100_RS04320 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS04320 PF00550 Phosphopantetheine attachment site CLO1100_RS04320 PF00668 Condensation domain CLO1100_RS04320 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS04320 PF00501 AMP-binding enzyme CLO1100_RS04325 PF00668 Condensation domain CLO1100_RS04325 PF00550 Phosphopantetheine attachment site CLO1100_RS04325 PF00501 AMP-binding enzyme CLO1100_RS04325 PF00975 Thioesterase domain CLO1100_RS04325 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS04335 PF00975 Thioesterase domain CLO1100_RS04335 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS04335 PF00668 Condensation domain CLO1100_RS04335 PF00501 AMP-binding enzyme CLO1100_RS04335 PF00550 Phosphopantetheine attachment site CLO1100_RS04340 PF00698 Acyl transferase domain CLO1100_RS04345 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS04345 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS04345 PF00202 Aminotransferase class-III CLO1100_RS04345 PF00550 Phosphopantetheine attachment site CLO1100_RS04345 PF00668 Condensation domain CLO1100_RS04345 PF16197 Ketoacyl-synthetase C-terminal extension CLO1100_RS04345 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS04345 PF00501 AMP-binding enzyme CLO1100_RS04350 PF00550 Phosphopantetheine attachment site CLO1100_RS04350 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS04350 PF00668 Condensation domain CLO1100_RS04350 PF00975 Thioesterase domain CLO1100_RS04350 PF00501 AMP-binding enzyme CLO1100_RS04355 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS04355 PF16197 Ketoacyl-synthetase C-terminal extension CLO1100_RS04355 PF00501 AMP-binding enzyme CLO1100_RS04355 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS04355 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS04355 PF00550 Phosphopantetheine attachment site CLO1100_RS04355 PF00202 Aminotransferase class-III CLO1100_RS04355 PF00668 Condensation domain CLO1100_RS04360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLO1100_RS04360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLO1100_RS04365 PF01220 Dehydroquinase class II CLO1100_RS04370 PF03193 RsgA GTPase CLO1100_RS04375 PF13419 Haloacid dehalogenase-like hydrolase CLO1100_RS04385 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CLO1100_RS04395 PF13407 Periplasmic binding protein domain CLO1100_RS04400 PF00005 ABC transporter CLO1100_RS04405 PF02653 Branched-chain amino acid transport system / permease component CLO1100_RS04410 PF02653 Branched-chain amino acid transport system / permease component CLO1100_RS04415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS04415 PF06580 Histidine kinase CLO1100_RS04415 PF00672 HAMP domain CLO1100_RS04415 PF02743 Cache domain CLO1100_RS04420 PF00072 Response regulator receiver domain CLO1100_RS04420 PF12833 Helix-turn-helix domain CLO1100_RS04425 PF00331 Glycosyl hydrolase family 10 CLO1100_RS04425 PF03422 Carbohydrate binding module (family 6) CLO1100_RS04425 PF00553 Cellulose binding domain CLO1100_RS04430 PF04616 Glycosyl hydrolases family 43 CLO1100_RS04430 PF03422 Carbohydrate binding module (family 6) CLO1100_RS04435 PF03422 Carbohydrate binding module (family 6) CLO1100_RS04435 PF00404 Dockerin type I domain CLO1100_RS04435 PF00756 Putative esterase CLO1100_RS04435 PF00331 Glycosyl hydrolase family 10 CLO1100_RS04440 PF04616 Glycosyl hydrolases family 43 CLO1100_RS04440 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CLO1100_RS04445 PF00404 Dockerin type I domain CLO1100_RS04445 PF00331 Glycosyl hydrolase family 10 CLO1100_RS04445 PF00756 Putative esterase CLO1100_RS04445 PF03422 Carbohydrate binding module (family 6) CLO1100_RS04450 PF04616 Glycosyl hydrolases family 43 CLO1100_RS04450 PF03422 Carbohydrate binding module (family 6) CLO1100_RS04455 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1100_RS04455 PF03425 Carbohydrate binding domain (family 11) CLO1100_RS04455 PF00404 Dockerin type I domain CLO1100_RS04460 PF16499 Alpha galactosidase A CLO1100_RS04460 PF17801 Alpha galactosidase C-terminal beta sandwich domain CLO1100_RS04465 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CLO1100_RS04465 PF16355 Domain of unknown function (DUF4982) CLO1100_RS04465 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CLO1100_RS04465 PF00703 Glycosyl hydrolases family 2 CLO1100_RS04465 PF02837 Glycosyl hydrolases family 2, sugar binding domain CLO1100_RS04470 PF00331 Glycosyl hydrolase family 10 CLO1100_RS04470 PF00404 Dockerin type I domain CLO1100_RS04470 PF00756 Putative esterase CLO1100_RS04470 PF03422 Carbohydrate binding module (family 6) CLO1100_RS04475 PF03422 Carbohydrate binding module (family 6) CLO1100_RS04475 PF04616 Glycosyl hydrolases family 43 CLO1100_RS04480 PF17189 Glycosyl hydrolase family 30 beta sandwich domain CLO1100_RS04485 PF03422 Carbohydrate binding module (family 6) CLO1100_RS04485 PF00404 Dockerin type I domain CLO1100_RS04485 PF00756 Putative esterase CLO1100_RS04485 PF00331 Glycosyl hydrolase family 10 CLO1100_RS04505 PF03425 Carbohydrate binding domain (family 11) CLO1100_RS04505 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1100_RS04505 PF00404 Dockerin type I domain CLO1100_RS04510 PF01095 Pectinesterase CLO1100_RS04515 PF18370 Rhamnogalacturonan I lyases beta-sheet domain CLO1100_RS04520 PF00005 ABC transporter CLO1100_RS04520 PF00664 ABC transporter transmembrane region CLO1100_RS04525 PF00005 ABC transporter CLO1100_RS04530 PF13333 Integrase core domain CLO1100_RS04530 PF00665 Integrase core domain CLO1100_RS04540 PF00404 Dockerin type I domain CLO1100_RS04540 PF00942 Cellulose binding domain CLO1100_RS04540 PF00759 Glycosyl hydrolase family 9 CLO1100_RS04545 PF02743 Cache domain CLO1100_RS04545 PF00672 HAMP domain CLO1100_RS04545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS04545 PF06580 Histidine kinase CLO1100_RS04550 PF00072 Response regulator receiver domain CLO1100_RS04550 PF12833 Helix-turn-helix domain CLO1100_RS04560 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS04565 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS04570 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CLO1100_RS04580 PF04616 Glycosyl hydrolases family 43 CLO1100_RS04580 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CLO1100_RS04585 PF01229 Glycosyl hydrolases family 39 CLO1100_RS04590 PF00756 Putative esterase CLO1100_RS04605 PF01891 Cobalt uptake substrate-specific transmembrane region CLO1100_RS04610 PF02553 Cobalt transport protein component CbiN CLO1100_RS04615 PF02361 Cobalt transport protein CLO1100_RS04620 PF00005 ABC transporter CLO1100_RS04625 PF01888 CbiD CLO1100_RS04630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLO1100_RS04635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLO1100_RS04640 PF01890 Cobalamin synthesis G C-terminus CLO1100_RS04640 PF11760 Cobalamin synthesis G N-terminal CLO1100_RS04640 PF11761 Cobalamin biosynthesis central region CLO1100_RS04645 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CLO1100_RS04645 PF01488 Shikimate / quinate 5-dehydrogenase CLO1100_RS04650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLO1100_RS04655 PF01488 Shikimate / quinate 5-dehydrogenase CLO1100_RS04655 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CLO1100_RS04660 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CLO1100_RS04660 PF03900 Porphobilinogen deaminase, C-terminal domain CLO1100_RS04665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLO1100_RS04665 PF02602 Uroporphyrinogen-III synthase HemD CLO1100_RS04670 PF00490 Delta-aminolevulinic acid dehydratase CLO1100_RS04675 PF00202 Aminotransferase class-III CLO1100_RS04685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLO1100_RS04690 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLO1100_RS04690 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLO1100_RS04695 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLO1100_RS04700 PF02570 Precorrin-8X methylmutase CLO1100_RS04705 PF03186 CobD/Cbib protein CLO1100_RS04710 PF00155 Aminotransferase class I and II CLO1100_RS04715 PF01636 Phosphotransferase enzyme family CLO1100_RS04720 PF01008 Initiation factor 2 subunit family CLO1100_RS04725 PF00596 Class II Aldolase and Adducin N-terminal domain CLO1100_RS04735 PF04439 Streptomycin adenylyltransferase CLO1100_RS04760 PF01270 Glycosyl hydrolases family 8 CLO1100_RS04775 PF02463 RecF/RecN/SMC N terminal domain CLO1100_RS04780 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLO1100_RS04785 PF01336 OB-fold nucleic acid binding domain CLO1100_RS04785 PF02938 GAD domain CLO1100_RS04785 PF00152 tRNA synthetases class II (D, K and N) CLO1100_RS04815 PF00535 Glycosyl transferase family 2 CLO1100_RS04825 PF00303 Thymidylate synthase CLO1100_RS04830 PF00186 Dihydrofolate reductase CLO1100_RS04835 PF00707 Translation initiation factor IF-3, C-terminal domain CLO1100_RS04835 PF05198 Translation initiation factor IF-3, N-terminal domain CLO1100_RS04840 PF01632 Ribosomal protein L35 CLO1100_RS04845 PF00453 Ribosomal protein L20 CLO1100_RS04850 PF11799 impB/mucB/samB family C-terminal domain CLO1100_RS04850 PF00817 impB/mucB/samB family CLO1100_RS04860 PF01553 Acyltransferase CLO1100_RS04870 PF02687 FtsX-like permease family CLO1100_RS04870 PF00005 ABC transporter CLO1100_RS04870 PF12704 MacB-like periplasmic core domain CLO1100_RS04885 PF10150 Ribonuclease E/G family CLO1100_RS04885 PF00575 S1 RNA binding domain CLO1100_RS04890 PF00829 Ribosomal prokaryotic L21 protein CLO1100_RS04900 PF01016 Ribosomal L27 protein CLO1100_RS04905 PF09269 Domain of unknown function (DUF1967) CLO1100_RS04905 PF01926 50S ribosome-binding GTPase CLO1100_RS04905 PF01018 GTP1/OBG CLO1100_RS04910 PF01985 CRS1 / YhbY (CRM) domain CLO1100_RS04925 PF08331 Domain of unknown function (DUF1730) CLO1100_RS04930 PF01227 GTP cyclohydrolase I CLO1100_RS04935 PF01966 HD domain CLO1100_RS04940 PF00809 Pterin binding enzyme CLO1100_RS04945 PF02152 Dihydroneopterin aldolase CLO1100_RS04945 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CLO1100_RS04950 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CLO1100_RS04955 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CLO1100_RS04955 PF12557 Cob(I)alamin adenosyltransferase N terminal CLO1100_RS04960 PF08323 Starch synthase catalytic domain CLO1100_RS04960 PF00534 Glycosyl transferases group 1 CLO1100_RS05010 PF14698 Argininosuccinate lyase C-terminal CLO1100_RS05010 PF00206 Lyase CLO1100_RS05015 PF00764 Arginosuccinate synthase CLO1100_RS05020 PF02075 Crossover junction endodeoxyribonuclease RuvC CLO1100_RS05025 PF07499 RuvA, C-terminal domain CLO1100_RS05025 PF01330 RuvA N terminal domain CLO1100_RS05030 PF05491 RuvB C-terminal winged helix domain CLO1100_RS05030 PF05496 Holliday junction DNA helicase RuvB P-loop domain CLO1100_RS05030 PF17864 RuvB AAA lid domain CLO1100_RS05035 PF02677 Epoxyqueuosine reductase QueH CLO1100_RS05040 PF01520 N-acetylmuramoyl-L-alanine amidase CLO1100_RS05045 PF10646 Sporulation and spore germination CLO1100_RS05050 PF03725 3' exoribonuclease family, domain 2 CLO1100_RS05050 PF01138 3' exoribonuclease family, domain 1 CLO1100_RS05055 PF01725 Ham1 family CLO1100_RS05085 PF07486 Cell Wall Hydrolase CLO1100_RS05090 PF01048 Phosphorylase superfamily CLO1100_RS05115 PF01467 Cytidylyltransferase-like CLO1100_RS05120 PF01966 HD domain CLO1100_RS05135 PF12848 ABC transporter CLO1100_RS05135 PF00005 ABC transporter CLO1100_RS05145 PF00501 AMP-binding enzyme CLO1100_RS05150 PF00768 D-alanyl-D-alanine carboxypeptidase CLO1100_RS05150 PF07943 Penicillin-binding protein 5, C-terminal domain CLO1100_RS05155 PF10531 SLBB domain CLO1100_RS05160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLO1100_RS05160 PF02824 TGS domain CLO1100_RS05160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLO1100_RS05160 PF03129 Anticodon binding domain CLO1100_RS05165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLO1100_RS05165 PF02824 TGS domain CLO1100_RS05165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLO1100_RS05165 PF03129 Anticodon binding domain CLO1100_RS05190 PF00753 Metallo-beta-lactamase superfamily CLO1100_RS05195 PF13185 GAF domain CLO1100_RS05215 PF15975 Flotillin CLO1100_RS05215 PF01145 SPFH domain / Band 7 family CLO1100_RS05220 PF00672 HAMP domain CLO1100_RS05220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS05225 PF12848 ABC transporter CLO1100_RS05225 PF00005 ABC transporter CLO1100_RS05230 PF12833 Helix-turn-helix domain CLO1100_RS05230 PF00072 Response regulator receiver domain CLO1100_RS05235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS05235 PF06580 Histidine kinase CLO1100_RS05235 PF00672 HAMP domain CLO1100_RS05235 PF02743 Cache domain CLO1100_RS05240 PF00395 S-layer homology domain CLO1100_RS05245 PF01547 Bacterial extracellular solute-binding protein CLO1100_RS05250 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS05255 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS05260 PF03636 Glycosyl hydrolase family 65, N-terminal domain CLO1100_RS05260 PF03632 Glycosyl hydrolase family 65 central catalytic domain CLO1100_RS05260 PF03633 Glycosyl hydrolase family 65, C-terminal domain CLO1100_RS05265 PF13419 Haloacid dehalogenase-like hydrolase CLO1100_RS05275 PF04616 Glycosyl hydrolases family 43 CLO1100_RS05280 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CLO1100_RS05280 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CLO1100_RS05285 PF08544 GHMP kinases C terminal CLO1100_RS05285 PF00288 GHMP kinases N terminal domain CLO1100_RS05285 PF10509 Galactokinase galactose-binding signature CLO1100_RS05290 PF16363 GDP-mannose 4,6 dehydratase CLO1100_RS05300 PF00005 ABC transporter CLO1100_RS05300 PF00664 ABC transporter transmembrane region CLO1100_RS05305 PF00005 ABC transporter CLO1100_RS05305 PF00664 ABC transporter transmembrane region CLO1100_RS05320 PF00543 Nitrogen regulatory protein P-II CLO1100_RS05325 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLO1100_RS05325 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLO1100_RS05330 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLO1100_RS05335 PF02142 MGS-like domain CLO1100_RS05340 PF00501 AMP-binding enzyme CLO1100_RS05340 PF14535 AMP-binding enzyme C-terminal domain CLO1100_RS05350 PF00005 ABC transporter CLO1100_RS05355 PF00005 ABC transporter CLO1100_RS05355 PF02687 FtsX-like permease family CLO1100_RS05355 PF12704 MacB-like periplasmic core domain CLO1100_RS05375 PF12822 ECF transporter, substrate-specific component CLO1100_RS05390 PF00204 DNA gyrase B CLO1100_RS05390 PF00986 DNA gyrase B subunit, carboxyl terminus CLO1100_RS05390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS05390 PF01751 Toprim domain CLO1100_RS05395 PF03989 DNA gyrase C-terminal domain, beta-propeller CLO1100_RS05395 PF00521 DNA gyrase/topoisomerase IV, subunit A CLO1100_RS05405 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLO1100_RS05425 PF02608 ABC transporter substrate-binding protein PnrA-like CLO1100_RS05430 PF00005 ABC transporter CLO1100_RS05435 PF02653 Branched-chain amino acid transport system / permease component CLO1100_RS05440 PF02653 Branched-chain amino acid transport system / permease component CLO1100_RS05445 PF00579 tRNA synthetases class I (W and Y) CLO1100_RS05450 PF02659 Putative manganese efflux pump CLO1100_RS05455 PF00271 Helicase conserved C-terminal domain CLO1100_RS05455 PF12344 Ultra-violet resistance protein B CLO1100_RS05455 PF17757 UvrB interaction domain CLO1100_RS05455 PF02151 UvrB/uvrC motif CLO1100_RS05455 PF04851 Type III restriction enzyme, res subunit CLO1100_RS05460 PF03788 LrgA family CLO1100_RS05465 PF04172 LrgB-like family CLO1100_RS05475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLO1100_RS05475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLO1100_RS05475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLO1100_RS05475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLO1100_RS05485 PF01966 HD domain CLO1100_RS05485 PF11871 Domain of unknown function (DUF3391) CLO1100_RS05520 PF02899 Phage integrase, N-terminal SAM-like domain CLO1100_RS05520 PF00589 Phage integrase family CLO1100_RS05525 PF01381 Helix-turn-helix CLO1100_RS05535 PF18277 AbrB C-terminal domain CLO1100_RS05535 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLO1100_RS05565 PF00145 C-5 cytosine-specific DNA methylase CLO1100_RS05575 PF01555 DNA methylase CLO1100_RS05660 PF00574 Clp protease CLO1100_RS05795 PF07690 Major Facilitator Superfamily CLO1100_RS05800 PF05154 TM2 domain CLO1100_RS05815 PF03063 Prismane/CO dehydrogenase family CLO1100_RS05820 PF01741 Large-conductance mechanosensitive channel, MscL CLO1100_RS05825 PF00188 Cysteine-rich secretory protein family CLO1100_RS05830 PF02535 ZIP Zinc transporter CLO1100_RS05835 PF02311 AraC-like ligand binding domain CLO1100_RS05835 PF12833 Helix-turn-helix domain CLO1100_RS05840 PF00005 ABC transporter CLO1100_RS05840 PF00664 ABC transporter transmembrane region CLO1100_RS05845 PF00005 ABC transporter CLO1100_RS05845 PF00664 ABC transporter transmembrane region CLO1100_RS05850 PF01263 Aldose 1-epimerase CLO1100_RS05865 PF00488 MutS domain V CLO1100_RS05865 PF01713 Smr domain CLO1100_RS05880 PF00009 Elongation factor Tu GTP binding domain CLO1100_RS05880 PF16658 Class II release factor RF3, C-terminal domain CLO1100_RS05880 PF03144 Elongation factor Tu domain 2 CLO1100_RS05885 PF02824 TGS domain CLO1100_RS05885 PF03129 Anticodon binding domain CLO1100_RS05885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLO1100_RS05885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLO1100_RS05895 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLO1100_RS05895 PF00588 SpoU rRNA Methylase family CLO1100_RS05900 PF00356 Bacterial regulatory proteins, lacI family CLO1100_RS05905 PF06165 Glycosyltransferase family 36 CLO1100_RS05905 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CLO1100_RS05925 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CLO1100_RS05925 PF01409 tRNA synthetases class II core domain (F) CLO1100_RS05930 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CLO1100_RS05930 PF01588 Putative tRNA binding domain CLO1100_RS05930 PF03147 Ferredoxin-fold anticodon binding domain CLO1100_RS05930 PF03484 tRNA synthetase B5 domain CLO1100_RS05930 PF03483 B3/4 domain CLO1100_RS05935 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLO1100_RS05940 PF00342 Phosphoglucose isomerase CLO1100_RS05950 PF02875 Mur ligase family, glutamate ligase domain CLO1100_RS05950 PF08245 Mur ligase middle domain CLO1100_RS05960 PF01734 Patatin-like phospholipase CLO1100_RS05965 PF14821 Threonine synthase N terminus CLO1100_RS05965 PF00291 Pyridoxal-phosphate dependent enzyme CLO1100_RS05975 PF01842 ACT domain CLO1100_RS05975 PF00742 Homoserine dehydrogenase CLO1100_RS05975 PF03447 Homoserine dehydrogenase, NAD binding domain CLO1100_RS05990 PF01371 Trp repressor protein CLO1100_RS06000 PF07516 SecA Wing and Scaffold domain CLO1100_RS06000 PF07517 SecA DEAD-like domain CLO1100_RS06000 PF02810 SEC-C motif CLO1100_RS06000 PF01043 SecA preprotein cross-linking domain CLO1100_RS06010 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLO1100_RS06010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLO1100_RS06010 PF02811 PHP domain CLO1100_RS06010 PF01336 OB-fold nucleic acid binding domain CLO1100_RS06010 PF14579 Helix-hairpin-helix motif CLO1100_RS06015 PF02081 Tryptophan RNA-binding attenuator protein CLO1100_RS06030 PF01066 CDP-alcohol phosphatidyltransferase CLO1100_RS06040 PF01556 DnaJ C terminal domain CLO1100_RS06040 PF00226 DnaJ domain CLO1100_RS06040 PF00684 DnaJ central domain CLO1100_RS06060 PF00501 AMP-binding enzyme CLO1100_RS06060 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS06065 PF01713 Smr domain CLO1100_RS06065 PF00488 MutS domain V CLO1100_RS06070 PF03144 Elongation factor Tu domain 2 CLO1100_RS06070 PF00009 Elongation factor Tu GTP binding domain CLO1100_RS06070 PF14492 Elongation Factor G, domain II CLO1100_RS06070 PF00679 Elongation factor G C-terminus CLO1100_RS06075 PF02618 YceG-like family CLO1100_RS06080 PF01596 O-methyltransferase CLO1100_RS06085 PF01136 Peptidase family U32 CLO1100_RS06085 PF16325 Peptidase family U32 C-terminal domain CLO1100_RS06095 PF09704 CRISPR-associated protein (Cas_Cas5) CLO1100_RS06115 PF01867 CRISPR associated protein Cas1 CLO1100_RS06120 PF09827 CRISPR associated protein Cas2 CLO1100_RS06130 PF03717 Penicillin-binding Protein dimerisation domain CLO1100_RS06130 PF00905 Penicillin binding protein transpeptidase domain CLO1100_RS06155 PF03442 Carbohydrate binding domain X2 CLO1100_RS06155 PF02011 Glycosyl hydrolase family 48 CLO1100_RS06155 PF00942 Cellulose binding domain CLO1100_RS06185 PF00004 ATPase family associated with various cellular activities (AAA) CLO1100_RS06185 PF17866 AAA lid domain CLO1100_RS06290 PF01476 LysM domain CLO1100_RS06290 PF03734 L,D-transpeptidase catalytic domain CLO1100_RS06325 PF18563 TubC N-terminal docking domain CLO1100_RS06325 PF00501 AMP-binding enzyme CLO1100_RS06325 PF00550 Phosphopantetheine attachment site CLO1100_RS06325 PF00668 Condensation domain CLO1100_RS06325 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS06330 PF00501 AMP-binding enzyme CLO1100_RS06330 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS06330 PF00668 Condensation domain CLO1100_RS06330 PF00975 Thioesterase domain CLO1100_RS06330 PF00550 Phosphopantetheine attachment site CLO1100_RS06345 PF00501 AMP-binding enzyme CLO1100_RS06345 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS06345 PF16197 Ketoacyl-synthetase C-terminal extension CLO1100_RS06345 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS06345 PF16197 Ketoacyl-synthetase C-terminal extension CLO1100_RS06345 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS06345 PF00550 Phosphopantetheine attachment site CLO1100_RS06345 PF00550 Phosphopantetheine attachment site CLO1100_RS06345 PF00202 Aminotransferase class-III CLO1100_RS06345 PF00668 Condensation domain CLO1100_RS06345 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS06345 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS06345 PF00501 AMP-binding enzyme CLO1100_RS06345 PF00668 Condensation domain CLO1100_RS06345 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS06345 PF00202 Aminotransferase class-III CLO1100_RS06350 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS06350 PF00501 AMP-binding enzyme CLO1100_RS06350 PF00668 Condensation domain CLO1100_RS06350 PF00550 Phosphopantetheine attachment site CLO1100_RS06350 PF00975 Thioesterase domain CLO1100_RS06355 PF00668 Condensation domain CLO1100_RS06355 PF00550 Phosphopantetheine attachment site CLO1100_RS06355 PF00501 AMP-binding enzyme CLO1100_RS06355 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS06390 PF12146 Serine aminopeptidase, S33 CLO1100_RS06395 PF07883 Cupin domain CLO1100_RS06395 PF12833 Helix-turn-helix domain CLO1100_RS06400 PF02156 Glycosyl hydrolase family 26 CLO1100_RS06400 PF03425 Carbohydrate binding domain (family 11) CLO1100_RS06400 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1100_RS06400 PF00404 Dockerin type I domain CLO1100_RS06415 PF13732 Domain of unknown function (DUF4162) CLO1100_RS06415 PF00005 ABC transporter CLO1100_RS06455 PF18370 Rhamnogalacturonan I lyases beta-sheet domain CLO1100_RS06485 PF06445 GyrI-like small molecule binding domain CLO1100_RS06485 PF12833 Helix-turn-helix domain CLO1100_RS06500 PF05067 Manganese containing catalase CLO1100_RS06565 PF03424 Carbohydrate binding domain (family 17/28) CLO1100_RS06565 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1100_RS06600 PF13614 AAA domain CLO1100_RS06605 PF02195 ParB-like nuclease domain CLO1100_RS06605 PF17762 HTH domain found in ParB protein CLO1100_RS06620 PF07669 Eco57I restriction-modification methylase CLO1100_RS06620 PF02384 N-6 DNA Methylase CLO1100_RS06755 PF00395 S-layer homology domain CLO1100_RS06765 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLO1100_RS06765 PF18277 AbrB C-terminal domain CLO1100_RS06810 PF03527 RHS protein CLO1100_RS06850 PF12891 Glycoside hydrolase family 44 CLO1100_RS06850 PF00942 Cellulose binding domain CLO1100_RS06860 PF05067 Manganese containing catalase CLO1100_RS06885 PF04542 Sigma-70 region 2 CLO1100_RS06885 PF04545 Sigma-70, region 4 CLO1100_RS06890 PF00005 ABC transporter CLO1100_RS06895 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS06905 PF03063 Prismane/CO dehydrogenase family CLO1100_RS06920 PF02311 AraC-like ligand binding domain CLO1100_RS06920 PF12833 Helix-turn-helix domain CLO1100_RS06930 PF07508 Recombinase CLO1100_RS06930 PF00239 Resolvase, N terminal domain CLO1100_RS06935 PF04542 Sigma-70 region 2 CLO1100_RS06935 PF04545 Sigma-70, region 4 CLO1100_RS06940 PF01554 MatE CLO1100_RS06945 PF00318 Ribosomal protein S2 CLO1100_RS06950 PF00889 Elongation factor TS CLO1100_RS06955 PF00696 Amino acid kinase family CLO1100_RS06960 PF01765 Ribosome recycling factor CLO1100_RS06970 PF01255 Putative undecaprenyl diphosphate synthase CLO1100_RS06980 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLO1100_RS06980 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CLO1100_RS06980 PF13288 DXP reductoisomerase C-terminal domain CLO1100_RS06985 PF17820 PDZ domain CLO1100_RS06985 PF02163 Peptidase family M50 CLO1100_RS06990 PF04551 GcpE protein CLO1100_RS06995 PF11490 DNA polymerase III polC-type N-terminus II CLO1100_RS06995 PF14579 Helix-hairpin-helix motif CLO1100_RS06995 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLO1100_RS06995 PF00929 Exonuclease CLO1100_RS06995 PF01336 OB-fold nucleic acid binding domain CLO1100_RS06995 PF02811 PHP domain CLO1100_RS06995 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLO1100_RS07000 PF02576 RimP N-terminal domain CLO1100_RS07000 PF17384 RimP C-terminal SH3 domain CLO1100_RS07005 PF13184 NusA-like KH domain CLO1100_RS07005 PF08529 NusA N-terminal domain CLO1100_RS07005 PF00575 S1 RNA binding domain CLO1100_RS07010 PF04296 Protein of unknown function (DUF448) CLO1100_RS07015 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CLO1100_RS07020 PF00009 Elongation factor Tu GTP binding domain CLO1100_RS07020 PF11987 Translation-initiation factor 2 CLO1100_RS07020 PF04760 Translation initiation factor IF-2, N-terminal region CLO1100_RS07025 PF02033 Ribosome-binding factor A CLO1100_RS07030 PF01368 DHH family CLO1100_RS07030 PF02272 DHHA1 domain CLO1100_RS07035 PF16198 tRNA pseudouridylate synthase B C-terminal domain CLO1100_RS07035 PF01509 TruB family pseudouridylate synthase (N terminal domain) CLO1100_RS07040 PF01687 Riboflavin kinase CLO1100_RS07040 PF06574 FAD synthetase CLO1100_RS07045 PF01300 Telomere recombination CLO1100_RS07045 PF07503 HypF finger CLO1100_RS07045 PF00708 Acylphosphatase CLO1100_RS07045 PF17788 HypF Kae1-like domain CLO1100_RS07050 PF01455 HupF/HypC family CLO1100_RS07055 PF01924 Hydrogenase formation hypA family CLO1100_RS07060 PF02769 AIR synthase related protein, C-terminal domain CLO1100_RS07060 PF00586 AIR synthase related protein, N-terminal domain CLO1100_RS07065 PF00005 ABC transporter CLO1100_RS07070 PF04893 Yip1 domain CLO1100_RS07080 PF02687 FtsX-like permease family CLO1100_RS07080 PF12704 MacB-like periplasmic core domain CLO1100_RS07085 PF05193 Peptidase M16 inactive domain CLO1100_RS07085 PF00675 Insulinase (Peptidase family M16) CLO1100_RS07090 PF00675 Insulinase (Peptidase family M16) CLO1100_RS07090 PF05193 Peptidase M16 inactive domain CLO1100_RS07095 PF01790 Prolipoprotein diacylglyceryl transferase CLO1100_RS07100 PF01098 Cell cycle protein CLO1100_RS07105 PF02381 MraZ protein, putative antitoxin-like CLO1100_RS07110 PF01795 MraW methylase family CLO1100_RS07120 PF03793 PASTA domain CLO1100_RS07120 PF00905 Penicillin binding protein transpeptidase domain CLO1100_RS07120 PF03717 Penicillin-binding Protein dimerisation domain CLO1100_RS07125 PF08245 Mur ligase middle domain CLO1100_RS07125 PF01225 Mur ligase family, catalytic domain CLO1100_RS07125 PF02875 Mur ligase family, glutamate ligase domain CLO1100_RS07130 PF01225 Mur ligase family, catalytic domain CLO1100_RS07130 PF08245 Mur ligase middle domain CLO1100_RS07130 PF02875 Mur ligase family, glutamate ligase domain CLO1100_RS07135 PF00953 Glycosyl transferase family 4 CLO1100_RS07140 PF01098 Cell cycle protein CLO1100_RS07145 PF03033 Glycosyltransferase family 28 N-terminal domain CLO1100_RS07145 PF04101 Glycosyltransferase family 28 C-terminal domain CLO1100_RS07150 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLO1100_RS07155 PF00860 Permease family CLO1100_RS07165 PF07943 Penicillin-binding protein 5, C-terminal domain CLO1100_RS07165 PF00768 D-alanyl-D-alanine carboxypeptidase CLO1100_RS07170 PF04055 Radical SAM superfamily CLO1100_RS07170 PF02310 B12 binding domain CLO1100_RS07175 PF08298 PrkA AAA domain CLO1100_RS07175 PF06798 PrkA serine protein kinase C-terminal domain CLO1100_RS07180 PF04285 Protein of unknown function (DUF444) CLO1100_RS07185 PF04293 SpoVR like protein CLO1100_RS07190 PF00183 Hsp90 protein CLO1100_RS07195 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS07195 PF00501 AMP-binding enzyme CLO1100_RS07205 PF12729 Four helix bundle sensory module for signal transduction CLO1100_RS07205 PF00672 HAMP domain CLO1100_RS07205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS07210 PF11871 Domain of unknown function (DUF3391) CLO1100_RS07210 PF01966 HD domain CLO1100_RS07215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLO1100_RS07215 PF03466 LysR substrate binding domain CLO1100_RS07220 PF00586 AIR synthase related protein, N-terminal domain CLO1100_RS07220 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CLO1100_RS07220 PF02769 AIR synthase related protein, C-terminal domain CLO1100_RS07235 PF00404 Dockerin type I domain CLO1100_RS07235 PF01270 Glycosyl hydrolases family 8 CLO1100_RS07245 PF00437 Type II/IV secretion system protein CLO1100_RS07295 PF00069 Protein kinase domain CLO1100_RS07295 PF08239 Bacterial SH3 domain CLO1100_RS07390 PF01734 Patatin-like phospholipase CLO1100_RS07395 PF00892 EamA-like transporter family CLO1100_RS07400 PF01894 Uncharacterised protein family UPF0047 CLO1100_RS07410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLO1100_RS07415 PF12671 Putative amidase domain CLO1100_RS07430 PF05504 Spore germination B3/ GerAC like, C-terminal CLO1100_RS07435 PF03323 Bacillus/Clostridium GerA spore germination protein CLO1100_RS07445 PF05173 Dihydrodipicolinate reductase, C-terminus CLO1100_RS07445 PF01113 Dihydrodipicolinate reductase, N-terminus CLO1100_RS07455 PF00768 D-alanyl-D-alanine carboxypeptidase CLO1100_RS07455 PF07943 Penicillin-binding protein 5, C-terminal domain CLO1100_RS07460 PF03323 Bacillus/Clostridium GerA spore germination protein CLO1100_RS07470 PF05504 Spore germination B3/ GerAC like, C-terminal CLO1100_RS07495 PF13840 ACT domain CLO1100_RS07495 PF00696 Amino acid kinase family CLO1100_RS07500 PF05173 Dihydrodipicolinate reductase, C-terminus CLO1100_RS07500 PF01113 Dihydrodipicolinate reductase, N-terminus CLO1100_RS07505 PF00701 Dihydrodipicolinate synthetase family CLO1100_RS07510 PF08486 Stage II sporulation protein CLO1100_RS07515 PF13840 ACT domain CLO1100_RS07515 PF00696 Amino acid kinase family CLO1100_RS07520 PF02547 Queuosine biosynthesis protein CLO1100_RS07525 PF01702 Queuine tRNA-ribosyltransferase CLO1100_RS07530 PF02699 Preprotein translocase subunit CLO1100_RS07545 PF00132 Bacterial transferase hexapeptide (six repeats) CLO1100_RS07550 PF07549 SecD/SecF GG Motif CLO1100_RS07550 PF02355 Protein export membrane protein CLO1100_RS07555 PF02355 Protein export membrane protein CLO1100_RS07555 PF07549 SecD/SecF GG Motif CLO1100_RS07570 PF01807 CHC2 zinc finger CLO1100_RS07570 PF10410 DnaB-helicase binding domain of primase CLO1100_RS07570 PF08275 DNA primase catalytic core, N-terminal domain CLO1100_RS07575 PF03979 Sigma-70 factor, region 1.1 CLO1100_RS07575 PF04539 Sigma-70 region 3 CLO1100_RS07575 PF00140 Sigma-70 factor, region 1.2 CLO1100_RS07575 PF04542 Sigma-70 region 2 CLO1100_RS07575 PF04545 Sigma-70, region 4 CLO1100_RS07590 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CLO1100_RS07595 PF01784 NIF3 (NGG1p interacting factor 3) CLO1100_RS07620 PF03358 NADPH-dependent FMN reductase CLO1100_RS07625 PF00899 ThiF family CLO1100_RS07635 PF05192 MutS domain III CLO1100_RS07635 PF01624 MutS domain I CLO1100_RS07635 PF05190 MutS family domain IV CLO1100_RS07635 PF05188 MutS domain II CLO1100_RS07635 PF00488 MutS domain V CLO1100_RS07660 PF00005 ABC transporter CLO1100_RS07670 PF00072 Response regulator receiver domain CLO1100_RS07670 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS07675 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS07675 PF00989 PAS fold CLO1100_RS07680 PF18318 Glutamine synthetase C-terminal domain CLO1100_RS07680 PF00120 Glutamine synthetase, catalytic domain CLO1100_RS07680 PF12437 Glutamine synthetase type III N terminal CLO1100_RS07700 PF00557 Metallopeptidase family M24 CLO1100_RS07700 PF01321 Creatinase/Prolidase N-terminal domain CLO1100_RS07705 PF01522 Polysaccharide deacetylase CLO1100_RS07735 PF06508 Queuosine biosynthesis protein QueC CLO1100_RS07790 PF01695 IstB-like ATP binding protein CLO1100_RS07795 PF00589 Phage integrase family CLO1100_RS07825 PF01026 TatD related DNase CLO1100_RS07850 PF01522 Polysaccharide deacetylase CLO1100_RS07855 PF07873 YabP family CLO1100_RS07865 PF02562 PhoH-like protein CLO1100_RS07870 PF07697 7TM-HD extracellular CLO1100_RS07870 PF07698 7TM receptor with intracellular HD hydrolase CLO1100_RS07870 PF01966 HD domain CLO1100_RS07875 PF02130 Uncharacterized protein family UPF0054 CLO1100_RS07880 PF01219 Prokaryotic diacylglycerol kinase CLO1100_RS07885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLO1100_RS07890 PF01926 50S ribosome-binding GTPase CLO1100_RS07890 PF07650 KH domain CLO1100_RS07895 PF02565 Recombination protein O C terminal CLO1100_RS07895 PF11967 Recombination protein O N terminal CLO1100_RS07900 PF13091 PLD-like domain CLO1100_RS07900 PF13396 Phospholipase_D-nuclease N-terminal CLO1100_RS07905 PF01757 Acyltransferase family CLO1100_RS07915 PF00664 ABC transporter transmembrane region CLO1100_RS07915 PF00005 ABC transporter CLO1100_RS07920 PF00005 ABC transporter CLO1100_RS07920 PF00664 ABC transporter transmembrane region CLO1100_RS07930 PF05979 Bacterial protein of unknown function (DUF896) CLO1100_RS07935 PF01584 CheW-like domain CLO1100_RS07945 PF06071 Protein of unknown function (DUF933) CLO1100_RS07945 PF01926 50S ribosome-binding GTPase CLO1100_RS07960 PF00849 RNA pseudouridylate synthase CLO1100_RS07960 PF01479 S4 domain CLO1100_RS07965 PF06838 Methionine gamma-lyase CLO1100_RS07975 PF01168 Alanine racemase, N-terminal domain CLO1100_RS07980 PF04472 Cell division protein SepF CLO1100_RS07990 PF17774 Putative RNA-binding domain in YlmH CLO1100_RS07990 PF01479 S4 domain CLO1100_RS07995 PF05103 DivIVA protein CLO1100_RS08000 PF09397 Ftsk gamma domain CLO1100_RS08000 PF01580 FtsK/SpoIIIE family CLO1100_RS08000 PF17854 FtsK alpha domain CLO1100_RS08010 PF11842 Domain of unknown function (DUF3362) CLO1100_RS08010 PF04055 Radical SAM superfamily CLO1100_RS08010 PF08497 Radical SAM N-terminal CLO1100_RS08015 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLO1100_RS08015 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLO1100_RS08020 PF12072 Domain of unknown function (DUF3552) CLO1100_RS08020 PF00013 KH domain CLO1100_RS08020 PF01966 HD domain CLO1100_RS08025 PF13277 YmdB-like protein CLO1100_RS08035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLO1100_RS08040 PF01252 Signal peptidase (SPase) II CLO1100_RS08045 PF01479 S4 domain CLO1100_RS08045 PF00849 RNA pseudouridylate synthase CLO1100_RS08050 PF00156 Phosphoribosyl transferase domain CLO1100_RS08055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLO1100_RS08055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLO1100_RS08060 PF01979 Amidohydrolase family CLO1100_RS08065 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CLO1100_RS08070 PF00117 Glutamine amidotransferase class-I CLO1100_RS08070 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CLO1100_RS08075 PF02142 MGS-like domain CLO1100_RS08075 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLO1100_RS08075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLO1100_RS08080 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CLO1100_RS08085 PF01180 Dihydroorotate dehydrogenase CLO1100_RS08090 PF00300 Histidine phosphatase superfamily (branch 1) CLO1100_RS08105 PF04073 Aminoacyl-tRNA editing domain CLO1100_RS08120 PF04055 Radical SAM superfamily CLO1100_RS08135 PF00990 Diguanylate cyclase, GGDEF domain CLO1100_RS08135 PF03707 Bacterial signalling protein N terminal repeat CLO1100_RS08135 PF00563 EAL domain CLO1100_RS08140 PF02001 Protein of unknown function DUF134 CLO1100_RS08145 PF10609 NUBPL iron-transfer P-loop NTPase CLO1100_RS08150 PF03601 Conserved hypothetical protein 698 CLO1100_RS08155 PF03466 LysR substrate binding domain CLO1100_RS08155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLO1100_RS08190 PF17770 Ribonuclease J C-terminal domain CLO1100_RS08190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CLO1100_RS08190 PF00753 Metallo-beta-lactamase superfamily CLO1100_RS08205 PF01212 Beta-eliminating lyase CLO1100_RS08255 PF00664 ABC transporter transmembrane region CLO1100_RS08255 PF00005 ABC transporter CLO1100_RS08260 PF00005 ABC transporter CLO1100_RS08260 PF00664 ABC transporter transmembrane region CLO1100_RS08270 PF02525 Flavodoxin-like fold CLO1100_RS08275 PF00082 Subtilase family CLO1100_RS08280 PF00704 Glycosyl hydrolases family 18 CLO1100_RS08285 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CLO1100_RS08290 PF02654 Cobalamin-5-phosphate synthase CLO1100_RS08295 PF02277 Phosphoribosyltransferase CLO1100_RS08310 PF00759 Glycosyl hydrolase family 9 CLO1100_RS08310 PF00404 Dockerin type I domain CLO1100_RS08310 PF00942 Cellulose binding domain CLO1100_RS08325 PF13286 Phosphohydrolase-associated domain CLO1100_RS08325 PF01966 HD domain CLO1100_RS08345 PF02954 Bacterial regulatory protein, Fis family CLO1100_RS08345 PF00158 Sigma-54 interaction domain CLO1100_RS08345 PF00989 PAS fold CLO1100_RS08350 PF01212 Beta-eliminating lyase CLO1100_RS08355 PF00324 Amino acid permease CLO1100_RS08360 PF01042 Endoribonuclease L-PSP CLO1100_RS08365 PF04552 Sigma-54, DNA binding domain CLO1100_RS08365 PF04963 Sigma-54 factor, core binding domain CLO1100_RS08365 PF00309 Sigma-54 factor, Activator interacting domain (AID) CLO1100_RS08375 PF00583 Acetyltransferase (GNAT) family CLO1100_RS08385 PF00580 UvrD/REP helicase N-terminal domain CLO1100_RS08385 PF13361 UvrD-like helicase C-terminal domain CLO1100_RS08395 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CLO1100_RS08395 PF01488 Shikimate / quinate 5-dehydrogenase CLO1100_RS08395 PF08501 Shikimate dehydrogenase substrate binding domain CLO1100_RS08405 PF09335 SNARE associated Golgi protein CLO1100_RS08425 PF00501 AMP-binding enzyme CLO1100_RS08425 PF14535 AMP-binding enzyme C-terminal domain CLO1100_RS08435 PF01648 4'-phosphopantetheinyl transferase superfamily CLO1100_RS08440 PF00975 Thioesterase domain CLO1100_RS08450 PF00994 Probable molybdopterin binding domain CLO1100_RS08450 PF18146 Damage-inducible protein CinA KH domain CLO1100_RS08450 PF02464 Competence-damaged protein CLO1100_RS08460 PF00154 recA bacterial DNA recombination protein CLO1100_RS08465 PF02631 RecX family CLO1100_RS08470 PF18693 TRAM domain CLO1100_RS08470 PF00919 Uncharacterized protein family UPF0004 CLO1100_RS08470 PF04055 Radical SAM superfamily CLO1100_RS08475 PF01066 CDP-alcohol phosphatidyltransferase CLO1100_RS08480 PF03061 Thioesterase superfamily CLO1100_RS08485 PF02504 Fatty acid synthesis protein CLO1100_RS08490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLO1100_RS08490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLO1100_RS08495 PF00698 Acyl transferase domain CLO1100_RS08505 PF00550 Phosphopantetheine attachment site CLO1100_RS08510 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS08510 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS08515 PF00035 Double-stranded RNA binding motif CLO1100_RS08515 PF14622 Ribonuclease-III-like CLO1100_RS08525 PF04232 Stage V sporulation protein S (SpoVS) CLO1100_RS08530 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CLO1100_RS08530 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CLO1100_RS08550 PF00248 Aldo/keto reductase family CLO1100_RS08555 PF06470 SMC proteins Flexible Hinge Domain CLO1100_RS08555 PF02463 RecF/RecN/SMC N terminal domain CLO1100_RS08560 PF02881 SRP54-type protein, helical bundle domain CLO1100_RS08560 PF00448 SRP54-type protein, GTPase domain CLO1100_RS08565 PF03699 Uncharacterised protein family (UPF0182) CLO1100_RS08570 PF13520 Amino acid permease CLO1100_RS08575 PF00480 ROK family CLO1100_RS08580 PF02229 Transcriptional Coactivator p15 (PC4) CLO1100_RS08585 PF13597 Anaerobic ribonucleoside-triphosphate reductase CLO1100_RS08585 PF03477 ATP cone domain CLO1100_RS08590 PF04055 Radical SAM superfamily CLO1100_RS08595 PF00884 Sulfatase CLO1100_RS08600 PF03630 Fumble CLO1100_RS08615 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CLO1100_RS08620 PF02881 SRP54-type protein, helical bundle domain CLO1100_RS08620 PF00448 SRP54-type protein, GTPase domain CLO1100_RS08620 PF02978 Signal peptide binding domain CLO1100_RS08625 PF00886 Ribosomal protein S16 CLO1100_RS08635 PF05239 PRC-barrel domain CLO1100_RS08635 PF01782 RimM N-terminal domain CLO1100_RS08640 PF01746 tRNA (Guanine-1)-methyltransferase CLO1100_RS08645 PF02579 Dinitrogenase iron-molybdenum cofactor CLO1100_RS08645 PF04055 Radical SAM superfamily CLO1100_RS08650 PF02579 Dinitrogenase iron-molybdenum cofactor CLO1100_RS08650 PF04055 Radical SAM superfamily CLO1100_RS08655 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CLO1100_RS08660 PF00148 Nitrogenase component 1 type Oxidoreductase CLO1100_RS08665 PF00148 Nitrogenase component 1 type Oxidoreductase CLO1100_RS08670 PF01053 Cys/Met metabolism PLP-dependent enzyme CLO1100_RS08675 PF00291 Pyridoxal-phosphate dependent enzyme CLO1100_RS08680 PF03193 RsgA GTPase CLO1100_RS08685 PF01245 Ribosomal protein L19 CLO1100_RS08690 PF10502 Signal peptidase, peptidase S26 CLO1100_RS08695 PF01926 50S ribosome-binding GTPase CLO1100_RS08700 PF01351 Ribonuclease HII CLO1100_RS08710 PF01312 FlhB HrpN YscU SpaS Family CLO1100_RS08715 PF02021 Uncharacterised protein family UPF0102 CLO1100_RS08720 PF01244 Membrane dipeptidase (Peptidase family M19) CLO1100_RS08725 PF12897 Alanine-glyoxylate amino-transferase CLO1100_RS08730 PF00206 Lyase CLO1100_RS08730 PF10397 Adenylosuccinate lyase C-terminus CLO1100_RS08735 PF07702 UTRA domain CLO1100_RS08735 PF00392 Bacterial regulatory proteins, gntR family CLO1100_RS08745 PF09335 SNARE associated Golgi protein CLO1100_RS08750 PF00324 Amino acid permease CLO1100_RS08755 PF00942 Cellulose binding domain CLO1100_RS08755 PF03442 Carbohydrate binding domain X2 CLO1100_RS08755 PF00963 Cohesin domain CLO1100_RS08760 PF02011 Glycosyl hydrolase family 48 CLO1100_RS08760 PF00404 Dockerin type I domain CLO1100_RS08765 PF00404 Dockerin type I domain CLO1100_RS08765 PF01270 Glycosyl hydrolases family 8 CLO1100_RS08770 PF00759 Glycosyl hydrolase family 9 CLO1100_RS08770 PF00404 Dockerin type I domain CLO1100_RS08770 PF00942 Cellulose binding domain CLO1100_RS08775 PF00759 Glycosyl hydrolase family 9 CLO1100_RS08775 PF00404 Dockerin type I domain CLO1100_RS08775 PF02927 Cellulase N-terminal ig-like domain CLO1100_RS08775 PF02018 Carbohydrate binding domain CLO1100_RS08785 PF00759 Glycosyl hydrolase family 9 CLO1100_RS08785 PF00553 Cellulose binding domain CLO1100_RS08785 PF00942 Cellulose binding domain CLO1100_RS08785 PF00041 Fibronectin type III domain CLO1100_RS08790 PF00942 Cellulose binding domain CLO1100_RS08790 PF00759 Glycosyl hydrolase family 9 CLO1100_RS08800 PF00759 Glycosyl hydrolase family 9 CLO1100_RS08800 PF00404 Dockerin type I domain CLO1100_RS08800 PF00942 Cellulose binding domain CLO1100_RS08810 PF00404 Dockerin type I domain CLO1100_RS08810 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1100_RS08820 PF03466 LysR substrate binding domain CLO1100_RS08820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLO1100_RS08830 PF01520 N-acetylmuramoyl-L-alanine amidase CLO1100_RS08835 PF00149 Calcineurin-like phosphoesterase CLO1100_RS08840 PF00403 Heavy-metal-associated domain CLO1100_RS08845 PF00403 Heavy-metal-associated domain CLO1100_RS08850 PF00877 NlpC/P60 family CLO1100_RS08855 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLO1100_RS08865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLO1100_RS08870 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS08875 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS08875 PF12911 N-terminal TM domain of oligopeptide transport permease C CLO1100_RS08880 PF00005 ABC transporter CLO1100_RS08880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLO1100_RS08885 PF00005 ABC transporter CLO1100_RS08885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLO1100_RS08895 PF03063 Prismane/CO dehydrogenase family CLO1100_RS08900 PF00457 Glycosyl hydrolases family 11 CLO1100_RS08910 PF02156 Glycosyl hydrolase family 26 CLO1100_RS08915 PF00759 Glycosyl hydrolase family 9 CLO1100_RS08915 PF00942 Cellulose binding domain CLO1100_RS08920 PF02927 Cellulase N-terminal ig-like domain CLO1100_RS08920 PF00404 Dockerin type I domain CLO1100_RS08920 PF00759 Glycosyl hydrolase family 9 CLO1100_RS08925 PF02927 Cellulase N-terminal ig-like domain CLO1100_RS08925 PF00404 Dockerin type I domain CLO1100_RS08925 PF00759 Glycosyl hydrolase family 9 CLO1100_RS08945 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLO1100_RS08945 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CLO1100_RS08950 PF01734 Patatin-like phospholipase CLO1100_RS08980 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS08985 PF02424 ApbE family CLO1100_RS09000 PF00348 Polyprenyl synthetase CLO1100_RS09005 PF00271 Helicase conserved C-terminal domain CLO1100_RS09005 PF17764 3′ DNA-binding domain (3′BD) CLO1100_RS09005 PF18074 Primosomal protein N C-terminal domain CLO1100_RS09005 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CLO1100_RS09005 PF04851 Type III restriction enzyme, res subunit CLO1100_RS09010 PF01327 Polypeptide deformylase CLO1100_RS09015 PF00551 Formyl transferase CLO1100_RS09015 PF02911 Formyl transferase, C-terminal domain CLO1100_RS09025 PF04298 Putative neutral zinc metallopeptidase CLO1100_RS09030 PF01189 16S rRNA methyltransferase RsmB/F CLO1100_RS09030 PF01029 NusB family CLO1100_RS09035 PF04055 Radical SAM superfamily CLO1100_RS09045 PF00069 Protein kinase domain CLO1100_RS09045 PF03793 PASTA domain CLO1100_RS09050 PF03193 RsgA GTPase CLO1100_RS09050 PF16745 RsgA N-terminal domain CLO1100_RS09055 PF00834 Ribulose-phosphate 3 epimerase family CLO1100_RS09125 PF18277 AbrB C-terminal domain CLO1100_RS09125 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLO1100_RS09135 PF11208 Protein of unknown function (DUF2992) CLO1100_RS09145 PF12833 Helix-turn-helix domain CLO1100_RS09145 PF02311 AraC-like ligand binding domain CLO1100_RS09155 PF00041 Fibronectin type III domain CLO1100_RS09155 PF00704 Glycosyl hydrolases family 18 CLO1100_RS09160 PF01264 Chorismate synthase CLO1100_RS09165 PF12801 4Fe-4S binding domain CLO1100_RS09175 PF01202 Shikimate kinase CLO1100_RS09180 PF02156 Glycosyl hydrolase family 26 CLO1100_RS09185 PF13419 Haloacid dehalogenase-like hydrolase CLO1100_RS09190 PF02001 Protein of unknown function DUF134 CLO1100_RS09210 PF00698 Acyl transferase domain CLO1100_RS09215 PF00578 AhpC/TSA family CLO1100_RS09220 PF02683 Cytochrome C biogenesis protein transmembrane region CLO1100_RS09225 PF01569 PAP2 superfamily CLO1100_RS09235 PF00005 ABC transporter CLO1100_RS09280 PF00391 PEP-utilising enzyme, mobile domain CLO1100_RS09280 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CLO1100_RS09290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLO1100_RS09290 PF00356 Bacterial regulatory proteins, lacI family CLO1100_RS09300 PF17801 Alpha galactosidase C-terminal beta sandwich domain CLO1100_RS09300 PF16499 Alpha galactosidase A CLO1100_RS09320 PF02734 DAK2 domain CLO1100_RS09325 PF02733 Dak1 domain CLO1100_RS09330 PF02502 Ribose/Galactose Isomerase CLO1100_RS09340 PF13407 Periplasmic binding protein domain CLO1100_RS09345 PF02653 Branched-chain amino acid transport system / permease component CLO1100_RS09350 PF00005 ABC transporter CLO1100_RS09355 PF00072 Response regulator receiver domain CLO1100_RS09355 PF12833 Helix-turn-helix domain CLO1100_RS09360 PF06580 Histidine kinase CLO1100_RS09360 PF02743 Cache domain CLO1100_RS09360 PF00672 HAMP domain CLO1100_RS09360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS09365 PF03741 Integral membrane protein TerC family CLO1100_RS09370 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS09380 PF00009 Elongation factor Tu GTP binding domain CLO1100_RS09385 PF01507 Phosphoadenosine phosphosulfate reductase family CLO1100_RS09390 PF01507 Phosphoadenosine phosphosulfate reductase family CLO1100_RS09395 PF00480 ROK family CLO1100_RS09395 PF01047 MarR family CLO1100_RS09400 PF12857 TOBE-like domain CLO1100_RS09400 PF17850 CysA C-terminal regulatory domain CLO1100_RS09400 PF00005 ABC transporter CLO1100_RS09405 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS09410 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS09425 PF00759 Glycosyl hydrolase family 9 CLO1100_RS09425 PF00942 Cellulose binding domain CLO1100_RS09435 PF01925 Sulfite exporter TauE/SafE CLO1100_RS09450 PF01476 LysM domain CLO1100_RS09450 PF00877 NlpC/P60 family CLO1100_RS09460 PF00589 Phage integrase family CLO1100_RS09460 PF02899 Phage integrase, N-terminal SAM-like domain CLO1100_RS09490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS09490 PF17203 Single cache domain 3 CLO1100_RS09490 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLO1100_RS09490 PF00989 PAS fold CLO1100_RS09495 PF04397 LytTr DNA-binding domain CLO1100_RS09495 PF00072 Response regulator receiver domain CLO1100_RS09510 PF08369 Proto-chlorophyllide reductase 57 kD subunit CLO1100_RS09510 PF00148 Nitrogenase component 1 type Oxidoreductase CLO1100_RS09525 PF04542 Sigma-70 region 2 CLO1100_RS09525 PF08281 Sigma-70, region 4 CLO1100_RS09535 PF06445 GyrI-like small molecule binding domain CLO1100_RS09560 PF00005 ABC transporter CLO1100_RS09565 PF07690 Major Facilitator Superfamily CLO1100_RS09570 PF00391 PEP-utilising enzyme, mobile domain CLO1100_RS09570 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CLO1100_RS09575 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1100_RS09575 PF00553 Cellulose binding domain CLO1100_RS09580 PF00759 Glycosyl hydrolase family 9 CLO1100_RS09580 PF02927 Cellulase N-terminal ig-like domain CLO1100_RS09580 PF02018 Carbohydrate binding domain CLO1100_RS09585 PF12833 Helix-turn-helix domain CLO1100_RS09590 PF00689 Cation transporting ATPase, C-terminus CLO1100_RS09590 PF00690 Cation transporter/ATPase, N-terminus CLO1100_RS09595 PF00464 Serine hydroxymethyltransferase CLO1100_RS09610 PF02568 Thiamine biosynthesis protein (ThiI) CLO1100_RS09610 PF02926 THUMP domain CLO1100_RS09615 PF00266 Aminotransferase class-V CLO1100_RS09625 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLO1100_RS09630 PF00374 Nickel-dependent hydrogenase CLO1100_RS09630 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CLO1100_RS09630 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CLO1100_RS09635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CLO1100_RS09635 PF00361 Proton-conducting membrane transporter CLO1100_RS09650 PF00361 Proton-conducting membrane transporter CLO1100_RS09655 PF01476 LysM domain CLO1100_RS09660 PF00717 Peptidase S24-like CLO1100_RS09660 PF01726 LexA DNA binding domain CLO1100_RS09665 PF17209 Hfq protein CLO1100_RS09675 PF01119 DNA mismatch repair protein, C-terminal domain CLO1100_RS09675 PF08676 MutL C terminal dimerisation domain CLO1100_RS09680 PF01624 MutS domain I CLO1100_RS09680 PF00488 MutS domain V CLO1100_RS09680 PF05192 MutS domain III CLO1100_RS09680 PF05190 MutS family domain IV CLO1100_RS09680 PF05188 MutS domain II CLO1100_RS09690 PF04055 Radical SAM superfamily CLO1100_RS09690 PF00919 Uncharacterized protein family UPF0004 CLO1100_RS09690 PF01938 TRAM domain CLO1100_RS09700 PF03061 Thioesterase superfamily CLO1100_RS09710 PF00574 Clp protease CLO1100_RS09715 PF02441 Flavoprotein CLO1100_RS09725 PF00675 Insulinase (Peptidase family M16) CLO1100_RS09725 PF05193 Peptidase M16 inactive domain CLO1100_RS09730 PF03725 3' exoribonuclease family, domain 2 CLO1100_RS09730 PF00013 KH domain CLO1100_RS09730 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CLO1100_RS09730 PF01138 3' exoribonuclease family, domain 1 CLO1100_RS09730 PF00575 S1 RNA binding domain CLO1100_RS09735 PF00312 Ribosomal protein S15 CLO1100_RS09740 PF17863 AAA lid domain CLO1100_RS09740 PF07726 ATPase family associated with various cellular activities (AAA) CLO1100_RS09750 PF13559 Domain of unknown function (DUF4129) CLO1100_RS09750 PF11992 Domain of unknown function (DUF3488) CLO1100_RS09750 PF01841 Transglutaminase-like superfamily CLO1100_RS09770 PF00842 Alanine racemase, C-terminal domain CLO1100_RS09770 PF01168 Alanine racemase, N-terminal domain CLO1100_RS09770 PF01757 Acyltransferase family CLO1100_RS09775 PF02557 D-alanyl-D-alanine carboxypeptidase CLO1100_RS09780 PF07478 D-ala D-ala ligase C-terminus CLO1100_RS09780 PF01820 D-ala D-ala ligase N-terminus CLO1100_RS09785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS09785 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS09790 PF00072 Response regulator receiver domain CLO1100_RS09790 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS09795 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS09795 PF00672 HAMP domain CLO1100_RS09795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS09800 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS09800 PF00072 Response regulator receiver domain CLO1100_RS09805 PF00403 Heavy-metal-associated domain CLO1100_RS09815 PF03816 Cell envelope-related transcriptional attenuator domain CLO1100_RS09825 PF13180 PDZ domain CLO1100_RS09835 PF00795 Carbon-nitrogen hydrolase CLO1100_RS09840 PF05167 Uncharacterised ACR (DUF711) CLO1100_RS09860 PF08245 Mur ligase middle domain CLO1100_RS09870 PF03705 CheR methyltransferase, all-alpha domain CLO1100_RS09870 PF01739 CheR methyltransferase, SAM binding domain CLO1100_RS09875 PF00575 S1 RNA binding domain CLO1100_RS09875 PF02401 LytB protein CLO1100_RS09880 PF02224 Cytidylate kinase CLO1100_RS09905 PF01380 SIS domain CLO1100_RS09905 PF01418 Helix-turn-helix domain, rpiR family CLO1100_RS09915 PF02436 Conserved carboxylase domain CLO1100_RS09915 PF00682 HMGL-like CLO1100_RS09915 PF00364 Biotin-requiring enzyme CLO1100_RS09920 PF00364 Biotin-requiring enzyme CLO1100_RS09925 PF01039 Carboxyl transferase domain CLO1100_RS09930 PF04542 Sigma-70 region 2 CLO1100_RS09935 PF07691 PA14 domain CLO1100_RS09935 PF12791 Anti-sigma factor N-terminus CLO1100_RS09940 PF06962 Putative rRNA methylase CLO1100_RS09950 PF00849 RNA pseudouridylate synthase CLO1100_RS09950 PF01479 S4 domain CLO1100_RS09955 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CLO1100_RS09965 PF04079 Segregation and condensation complex subunit ScpB CLO1100_RS09970 PF02616 Segregation and condensation protein ScpA CLO1100_RS09975 PF02163 Peptidase family M50 CLO1100_RS09980 PF07943 Penicillin-binding protein 5, C-terminal domain CLO1100_RS09980 PF00768 D-alanyl-D-alanine carboxypeptidase CLO1100_RS09985 PF00591 Glycosyl transferase family, a/b domain CLO1100_RS09985 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CLO1100_RS09985 PF02885 Glycosyl transferase family, helical bundle domain CLO1100_RS09990 PF02899 Phage integrase, N-terminal SAM-like domain CLO1100_RS09990 PF00589 Phage integrase family CLO1100_RS09995 PF01944 Stage II sporulation protein M CLO1100_RS10000 PF00293 NUDIX domain CLO1100_RS10005 PF00075 RNase H CLO1100_RS10010 PF14748 Pyrroline-5-carboxylate reductase dimerisation CLO1100_RS10010 PF03807 NADP oxidoreductase coenzyme F420-dependent CLO1100_RS10015 PF00501 AMP-binding enzyme CLO1100_RS10015 PF14535 AMP-binding enzyme C-terminal domain CLO1100_RS10020 PF02652 L-lactate permease CLO1100_RS10030 PF10996 Beta-Casp domain CLO1100_RS10030 PF00753 Metallo-beta-lactamase superfamily CLO1100_RS10030 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CLO1100_RS10035 PF05343 M42 glutamyl aminopeptidase CLO1100_RS10040 PF05343 M42 glutamyl aminopeptidase CLO1100_RS10045 PF05343 M42 glutamyl aminopeptidase CLO1100_RS10060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLO1100_RS10060 PF00005 ABC transporter CLO1100_RS10065 PF00005 ABC transporter CLO1100_RS10065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLO1100_RS10070 PF12911 N-terminal TM domain of oligopeptide transport permease C CLO1100_RS10070 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS10075 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS10080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLO1100_RS10090 PF00005 ABC transporter CLO1100_RS10090 PF00664 ABC transporter transmembrane region CLO1100_RS10095 PF00664 ABC transporter transmembrane region CLO1100_RS10095 PF00005 ABC transporter CLO1100_RS10100 PF05636 HIGH Nucleotidyl Transferase CLO1100_RS10105 PF17770 Ribonuclease J C-terminal domain CLO1100_RS10105 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CLO1100_RS10105 PF00753 Metallo-beta-lactamase superfamily CLO1100_RS10110 PF13439 Glycosyltransferase Family 4 CLO1100_RS10110 PF00534 Glycosyl transferases group 1 CLO1100_RS10120 PF13361 UvrD-like helicase C-terminal domain CLO1100_RS10120 PF12705 PD-(D/E)XK nuclease superfamily CLO1100_RS10120 PF00580 UvrD/REP helicase N-terminal domain CLO1100_RS10125 PF12705 PD-(D/E)XK nuclease superfamily CLO1100_RS10125 PF13361 UvrD-like helicase C-terminal domain CLO1100_RS10135 PF00318 Ribosomal protein S2 CLO1100_RS10140 PF01593 Flavin containing amine oxidoreductase CLO1100_RS10145 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS10150 PF00571 CBS domain CLO1100_RS10155 PF13411 MerR HTH family regulatory protein CLO1100_RS10155 PF07739 TipAS antibiotic-recognition domain CLO1100_RS10165 PF03323 Bacillus/Clostridium GerA spore germination protein CLO1100_RS10170 PF05504 Spore germination B3/ GerAC like, C-terminal CLO1100_RS10175 PF03845 Spore germination protein CLO1100_RS10180 PF01476 LysM domain CLO1100_RS10180 PF03734 L,D-transpeptidase catalytic domain CLO1100_RS10190 PF02261 Aspartate decarboxylase CLO1100_RS10195 PF02569 Pantoate-beta-alanine ligase CLO1100_RS10200 PF02548 Ketopantoate hydroxymethyltransferase CLO1100_RS10210 PF07690 Major Facilitator Superfamily CLO1100_RS10220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLO1100_RS10220 PF03129 Anticodon binding domain CLO1100_RS10225 PF01192 RNA polymerase Rpb6 CLO1100_RS10230 PF00625 Guanylate kinase CLO1100_RS10235 PF04025 Domain of unknown function (DUF370) CLO1100_RS10240 PF08340 Domain of unknown function (DUF1732) CLO1100_RS10240 PF03755 YicC-like family, N-terminal region CLO1100_RS10245 PF00072 Response regulator receiver domain CLO1100_RS10250 PF04452 RNA methyltransferase CLO1100_RS10260 PF01556 DnaJ C terminal domain CLO1100_RS10260 PF00684 DnaJ central domain CLO1100_RS10260 PF00226 DnaJ domain CLO1100_RS10265 PF00012 Hsp70 protein CLO1100_RS10270 PF01025 GrpE CLO1100_RS10275 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CLO1100_RS10275 PF01628 HrcA protein C terminal domain CLO1100_RS10295 PF01966 HD domain CLO1100_RS10295 PF13286 Phosphohydrolase-associated domain CLO1100_RS10310 PF02361 Cobalt transport protein CLO1100_RS10315 PF00005 ABC transporter CLO1100_RS10320 PF00005 ABC transporter CLO1100_RS10330 PF00884 Sulfatase CLO1100_RS10340 PF00942 Cellulose binding domain CLO1100_RS10340 PF00759 Glycosyl hydrolase family 9 CLO1100_RS10340 PF00404 Dockerin type I domain CLO1100_RS10350 PF00535 Glycosyl transferase family 2 CLO1100_RS10360 PF00535 Glycosyl transferase family 2 CLO1100_RS10365 PF00202 Aminotransferase class-III CLO1100_RS10370 PF01370 NAD dependent epimerase/dehydratase family CLO1100_RS10375 PF00535 Glycosyl transferase family 2 CLO1100_RS10385 PF01040 UbiA prenyltransferase family CLO1100_RS10390 PF00072 Response regulator receiver domain CLO1100_RS10390 PF00196 Bacterial regulatory proteins, luxR family CLO1100_RS10445 PF03120 NAD-dependent DNA ligase OB-fold domain CLO1100_RS10445 PF12826 Helix-hairpin-helix motif CLO1100_RS10445 PF01653 NAD-dependent DNA ligase adenylation domain CLO1100_RS10445 PF00533 BRCA1 C Terminus (BRCT) domain CLO1100_RS10445 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CLO1100_RS10520 PF00589 Phage integrase family CLO1100_RS10520 PF12167 Arm DNA-binding domain CLO1100_RS10535 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLO1100_RS10545 PF01761 3-dehydroquinate synthase CLO1100_RS10550 PF08264 Anticodon-binding domain of tRNA CLO1100_RS10550 PF00133 tRNA synthetases class I (I, L, M and V) CLO1100_RS10550 PF06827 Zinc finger found in FPG and IleRS CLO1100_RS10565 PF00155 Aminotransferase class I and II CLO1100_RS10570 PF01680 SOR/SNZ family CLO1100_RS10575 PF01174 SNO glutamine amidotransferase family CLO1100_RS10580 PF01694 Rhomboid family CLO1100_RS10585 PF02219 Methylenetetrahydrofolate reductase CLO1100_RS10585 PF02574 Homocysteine S-methyltransferase CLO1100_RS10590 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS10590 PF00501 AMP-binding enzyme CLO1100_RS10595 PF00196 Bacterial regulatory proteins, luxR family CLO1100_RS10595 PF00072 Response regulator receiver domain CLO1100_RS10600 PF05384 Sensor protein DegS CLO1100_RS10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS10600 PF07730 Histidine kinase CLO1100_RS10610 PF03781 Sulfatase-modifying factor enzyme 1 CLO1100_RS10615 PF00457 Glycosyl hydrolases family 11 CLO1100_RS10625 PF01541 GIY-YIG catalytic domain CLO1100_RS10640 PF02915 Rubrerythrin CLO1100_RS10650 PF02463 RecF/RecN/SMC N terminal domain CLO1100_RS10655 PF02146 Sir2 family CLO1100_RS10660 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CLO1100_RS10680 PF00266 Aminotransferase class-V CLO1100_RS10685 PF00155 Aminotransferase class I and II CLO1100_RS10690 PF00155 Aminotransferase class I and II CLO1100_RS10690 PF00392 Bacterial regulatory proteins, gntR family CLO1100_RS10700 PF01063 Amino-transferase class IV CLO1100_RS10705 PF07670 Nucleoside recognition CLO1100_RS10715 PF01467 Cytidylyltransferase-like CLO1100_RS10725 PF17191 RecG wedge domain CLO1100_RS10725 PF00271 Helicase conserved C-terminal domain CLO1100_RS10725 PF00270 DEAD/DEAH box helicase CLO1100_RS10730 PF00830 Ribosomal L28 family CLO1100_RS10740 PF00563 EAL domain CLO1100_RS10740 PF01590 GAF domain CLO1100_RS10740 PF00990 Diguanylate cyclase, GGDEF domain CLO1100_RS10740 PF00360 Phytochrome region CLO1100_RS10745 PF02491 SHS2 domain inserted in FTSA CLO1100_RS10750 PF00730 HhH-GPD superfamily base excision DNA repair protein CLO1100_RS10750 PF00633 Helix-hairpin-helix motif CLO1100_RS10755 PF00534 Glycosyl transferases group 1 CLO1100_RS10755 PF08323 Starch synthase catalytic domain CLO1100_RS10760 PF01966 HD domain CLO1100_RS10760 PF00072 Response regulator receiver domain CLO1100_RS10765 PF13180 PDZ domain CLO1100_RS10770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS10770 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS10770 PF00989 PAS fold CLO1100_RS10770 PF00672 HAMP domain CLO1100_RS10770 PF18698 Histidine kinase sensor domain CLO1100_RS10775 PF00072 Response regulator receiver domain CLO1100_RS10775 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS10780 PF00072 Response regulator receiver domain CLO1100_RS10780 PF08769 Sporulation initiation factor Spo0A C terminal CLO1100_RS10785 PF05580 SpoIVB peptidase S55 CLO1100_RS10785 PF17820 PDZ domain CLO1100_RS10790 PF13476 AAA domain CLO1100_RS10795 PF01316 Arginine repressor, DNA binding domain CLO1100_RS10795 PF02863 Arginine repressor, C-terminal domain CLO1100_RS10800 PF01513 ATP-NAD kinase CLO1100_RS10805 PF01479 S4 domain CLO1100_RS10805 PF01728 FtsJ-like methyltransferase CLO1100_RS10810 PF02780 Transketolase, C-terminal domain CLO1100_RS10810 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CLO1100_RS10810 PF02779 Transketolase, pyrimidine binding domain CLO1100_RS10820 PF00348 Polyprenyl synthetase CLO1100_RS10825 PF02609 Exonuclease VII small subunit CLO1100_RS10830 PF13742 OB-fold nucleic acid binding domain CLO1100_RS10830 PF02601 Exonuclease VII, large subunit CLO1100_RS10835 PF01029 NusB family CLO1100_RS10850 PF03780 Asp23 family, cell envelope-related function CLO1100_RS10875 PF06686 Stage III sporulation protein AC/AD protein family CLO1100_RS10880 PF06686 Stage III sporulation protein AC/AD protein family CLO1100_RS10900 PF00005 ABC transporter CLO1100_RS10905 PF00392 Bacterial regulatory proteins, gntR family CLO1100_RS10920 PF08207 Elongation factor P (EF-P) KOW-like domain CLO1100_RS10920 PF01132 Elongation factor P (EF-P) OB domain CLO1100_RS10920 PF09285 Elongation factor P, C-terminal CLO1100_RS10925 PF00557 Metallopeptidase family M24 CLO1100_RS10925 PF01321 Creatinase/Prolidase N-terminal domain CLO1100_RS10930 PF01220 Dehydroquinase class II CLO1100_RS10940 PF02127 Aminopeptidase I zinc metalloprotease (M18) CLO1100_RS10965 PF01592 NifU-like N terminal domain CLO1100_RS10970 PF00266 Aminotransferase class-V CLO1100_RS10975 PF02082 Transcriptional regulator CLO1100_RS10990 PF16193 AAA C-terminal domain CLO1100_RS10990 PF12002 MgsA AAA+ ATPase C terminal CLO1100_RS10990 PF05496 Holliday junction DNA helicase RuvB P-loop domain CLO1100_RS11000 PF13180 PDZ domain CLO1100_RS11010 PF00483 Nucleotidyl transferase CLO1100_RS11015 PF06421 GTP-binding protein LepA C-terminus CLO1100_RS11015 PF00679 Elongation factor G C-terminus CLO1100_RS11015 PF03144 Elongation factor Tu domain 2 CLO1100_RS11015 PF00009 Elongation factor Tu GTP binding domain CLO1100_RS11040 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS11040 PF00072 Response regulator receiver domain CLO1100_RS11045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS11045 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS11050 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLO1100_RS11055 PF02938 GAD domain CLO1100_RS11055 PF00152 tRNA synthetases class II (D, K and N) CLO1100_RS11055 PF01336 OB-fold nucleic acid binding domain CLO1100_RS11060 PF13393 Histidyl-tRNA synthetase CLO1100_RS11060 PF03129 Anticodon binding domain CLO1100_RS11065 PF04055 Radical SAM superfamily CLO1100_RS11070 PF00753 Metallo-beta-lactamase superfamily CLO1100_RS11075 PF02580 D-Tyr-tRNA(Tyr) deacylase CLO1100_RS11080 PF04607 Region found in RelA / SpoT proteins CLO1100_RS11080 PF13291 ACT domain CLO1100_RS11080 PF02824 TGS domain CLO1100_RS11085 PF00156 Phosphoribosyl transferase domain CLO1100_RS11090 PF04616 Glycosyl hydrolases family 43 CLO1100_RS11090 PF03422 Carbohydrate binding module (family 6) CLO1100_RS11095 PF01368 DHH family CLO1100_RS11095 PF02272 DHHA1 domain CLO1100_RS11095 PF17768 RecJ OB domain CLO1100_RS11095 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CLO1100_RS11105 PF03772 Competence protein CLO1100_RS11105 PF13567 Domain of unknown function (DUF4131) CLO1100_RS11105 PF00753 Metallo-beta-lactamase superfamily CLO1100_RS11110 PF00877 NlpC/P60 family CLO1100_RS11130 PF01047 MarR family CLO1100_RS11140 PF01053 Cys/Met metabolism PLP-dependent enzyme CLO1100_RS11145 PF01037 Lrp/AsnC ligand binding domain CLO1100_RS11150 PF05670 NFACT protein RNA binding domain CLO1100_RS11155 PF00155 Aminotransferase class I and II CLO1100_RS11180 PF03323 Bacillus/Clostridium GerA spore germination protein CLO1100_RS11230 PF00270 DEAD/DEAH box helicase CLO1100_RS11230 PF00271 Helicase conserved C-terminal domain CLO1100_RS11230 PF03880 DbpA RNA binding domain CLO1100_RS11255 PF00533 BRCA1 C Terminus (BRCT) domain CLO1100_RS11255 PF01653 NAD-dependent DNA ligase adenylation domain CLO1100_RS11255 PF12826 Helix-hairpin-helix motif CLO1100_RS11255 PF03120 NAD-dependent DNA ligase OB-fold domain CLO1100_RS11265 PF03418 Germination protease CLO1100_RS11270 PF01649 Ribosomal protein S20 CLO1100_RS11275 PF04055 Radical SAM superfamily CLO1100_RS11275 PF06969 HemN C-terminal domain CLO1100_RS11280 PF01554 MatE CLO1100_RS11285 PF12833 Helix-turn-helix domain CLO1100_RS11285 PF00072 Response regulator receiver domain CLO1100_RS11290 PF13492 GAF domain CLO1100_RS11290 PF07694 5TMR of 5TMR-LYT CLO1100_RS11290 PF06580 Histidine kinase CLO1100_RS11290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS11295 PF13407 Periplasmic binding protein domain CLO1100_RS11300 PF02653 Branched-chain amino acid transport system / permease component CLO1100_RS11305 PF00005 ABC transporter CLO1100_RS11310 PF13407 Periplasmic binding protein domain CLO1100_RS11315 PF00535 Glycosyl transferase family 2 CLO1100_RS11320 PF02581 Thiamine monophosphate synthase CLO1100_RS11325 PF02110 Hydroxyethylthiazole kinase family CLO1100_RS11330 PF01964 Radical SAM ThiC family CLO1100_RS11335 PF02581 Thiamine monophosphate synthase CLO1100_RS11335 PF08543 Phosphomethylpyrimidine kinase CLO1100_RS11345 PF01475 Ferric uptake regulator family CLO1100_RS11350 PF07664 Ferrous iron transport protein B C terminus CLO1100_RS11350 PF17910 FeoB cytosolic helical domain CLO1100_RS11350 PF02421 Ferrous iron transport protein B CLO1100_RS11350 PF07670 Nucleoside recognition CLO1100_RS11370 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS11375 PF01266 FAD dependent oxidoreductase CLO1100_RS11400 PF00885 6,7-dimethyl-8-ribityllumazine synthase CLO1100_RS11405 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CLO1100_RS11405 PF00925 GTP cyclohydrolase II CLO1100_RS11410 PF00677 Lumazine binding domain CLO1100_RS11415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLO1100_RS11415 PF01872 RibD C-terminal domain CLO1100_RS11425 PF00817 impB/mucB/samB family CLO1100_RS11425 PF11799 impB/mucB/samB family C-terminal domain CLO1100_RS11435 PF02586 SOS response associated peptidase (SRAP) CLO1100_RS11460 PF00404 Dockerin type I domain CLO1100_RS11460 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1100_RS11500 PF04542 Sigma-70 region 2 CLO1100_RS11500 PF04545 Sigma-70, region 4 CLO1100_RS11500 PF04539 Sigma-70 region 3 CLO1100_RS11510 PF03975 CheD chemotactic sensory transduction CLO1100_RS11515 PF04509 CheC-like family CLO1100_RS11520 PF01584 CheW-like domain CLO1100_RS11525 PF01627 Hpt domain CLO1100_RS11525 PF02895 Signal transducing histidine kinase, homodimeric domain CLO1100_RS11525 PF01584 CheW-like domain CLO1100_RS11525 PF07194 P2 response regulator binding domain CLO1100_RS11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS11530 PF01339 CheB methylesterase CLO1100_RS11530 PF00072 Response regulator receiver domain CLO1100_RS11535 PF10609 NUBPL iron-transfer P-loop NTPase CLO1100_RS11540 PF00448 SRP54-type protein, GTPase domain CLO1100_RS11545 PF00771 FHIPEP family CLO1100_RS11550 PF01312 FlhB HrpN YscU SpaS Family CLO1100_RS11555 PF01311 Bacterial export proteins, family 1 CLO1100_RS11560 PF01313 Bacterial export proteins, family 3 CLO1100_RS11565 PF00813 FliP family CLO1100_RS11575 PF00072 Response regulator receiver domain CLO1100_RS11580 PF04509 CheC-like family CLO1100_RS11580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CLO1100_RS11585 PF02154 Flagellar motor switch protein FliM CLO1100_RS11585 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CLO1100_RS11595 PF06289 Flagellar and Swarming motility proteins CLO1100_RS11600 PF00460 Flagella basal body rod protein CLO1100_RS11600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLO1100_RS11600 PF07559 Flagellar basal body protein FlaE CLO1100_RS11610 PF03963 Flagellar hook capping protein - N-terminal region CLO1100_RS11630 PF18269 T3SS EscN ATPase C-terminal domain CLO1100_RS11630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLO1100_RS11630 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLO1100_RS11640 PF14842 FliG N-terminal domain CLO1100_RS11640 PF14841 FliG middle domain CLO1100_RS11640 PF01706 FliG C-terminal domain CLO1100_RS11645 PF08345 Flagellar M-ring protein C-terminal CLO1100_RS11645 PF01514 Secretory protein of YscJ/FliF family CLO1100_RS11650 PF02049 Flagellar hook-basal body complex protein FliE CLO1100_RS11655 PF00460 Flagella basal body rod protein CLO1100_RS11655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLO1100_RS11660 PF00460 Flagella basal body rod protein CLO1100_RS11665 PF01134 Glucose inhibited division protein A CLO1100_RS11670 PF01751 Toprim domain CLO1100_RS11670 PF01396 Topoisomerase DNA binding C4 zinc finger CLO1100_RS11670 PF01131 DNA topoisomerase CLO1100_RS11845 PF17782 DprA winged helix domain CLO1100_RS11845 PF02481 DNA recombination-mediator protein A CLO1100_RS11850 PF01078 Magnesium chelatase, subunit ChlI CLO1100_RS11850 PF13335 Magnesium chelatase, subunit ChlI C-terminal CLO1100_RS11855 PF03477 ATP cone domain CLO1100_RS11860 PF05239 PRC-barrel domain CLO1100_RS11865 PF04545 Sigma-70, region 4 CLO1100_RS11865 PF04539 Sigma-70 region 3 CLO1100_RS11865 PF04542 Sigma-70 region 2 CLO1100_RS11870 PF04542 Sigma-70 region 2 CLO1100_RS11870 PF04545 Sigma-70, region 4 CLO1100_RS11875 PF03419 Sporulation factor SpoIIGA CLO1100_RS11880 PF12327 FtsZ family, C-terminal domain CLO1100_RS11880 PF00091 Tubulin/FtsZ family, GTPase domain CLO1100_RS11885 PF02491 SHS2 domain inserted in FTSA CLO1100_RS11890 PF06947 Protein of unknown function (DUF1290) CLO1100_RS11895 PF08478 POTRA domain, FtsQ-type CLO1100_RS11900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLO1100_RS11905 PF08353 Domain of unknown function (DUF1727) CLO1100_RS11905 PF08245 Mur ligase middle domain CLO1100_RS11910 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLO1100_RS11915 PF18152 DAHP synthase ferredoxin-like domain CLO1100_RS11915 PF00793 DAHP synthetase I family CLO1100_RS11925 PF01464 Transglycosylase SLT domain CLO1100_RS11930 PF01121 Dephospho-CoA kinase CLO1100_RS11935 PF01367 5'-3' exonuclease, C-terminal SAM fold CLO1100_RS11935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLO1100_RS11935 PF00476 DNA polymerase family A CLO1100_RS11945 PF08281 Sigma-70, region 4 CLO1100_RS11945 PF04542 Sigma-70 region 2 CLO1100_RS11950 PF00072 Response regulator receiver domain CLO1100_RS11950 PF08769 Sporulation initiation factor Spo0A C terminal CLO1100_RS11955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLO1100_RS11970 PF02386 Cation transport protein CLO1100_RS11975 PF00579 tRNA synthetases class I (W and Y) CLO1100_RS11985 PF02254 TrkA-N domain CLO1100_RS11985 PF02080 TrkA-C domain CLO1100_RS11990 PF04239 Protein of unknown function (DUF421) CLO1100_RS12030 PF03692 Putative zinc- or iron-chelating domain CLO1100_RS12035 PF01928 CYTH domain CLO1100_RS12045 PF01165 Ribosomal protein S21 CLO1100_RS12050 PF01230 HIT domain CLO1100_RS12055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLO1100_RS12055 PF01411 tRNA synthetases class II (A) CLO1100_RS12055 PF02272 DHHA1 domain CLO1100_RS12060 PF13419 Haloacid dehalogenase-like hydrolase CLO1100_RS12065 PF01960 ArgJ family CLO1100_RS12070 PF01584 CheW-like domain CLO1100_RS12085 PF06463 Molybdenum Cofactor Synthesis C CLO1100_RS12085 PF04055 Radical SAM superfamily CLO1100_RS12090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS12090 PF17202 Single cache domain 3 CLO1100_RS12090 PF00672 HAMP domain CLO1100_RS12095 PF12849 PBP superfamily domain CLO1100_RS12105 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS12110 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS12115 PF00005 ABC transporter CLO1100_RS12120 PF01895 PhoU domain CLO1100_RS12125 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS12125 PF00072 Response regulator receiver domain CLO1100_RS12130 PF13426 PAS domain CLO1100_RS12130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS12130 PF00672 HAMP domain CLO1100_RS12130 PF14827 Double sensory domain of two-component sensor kinase CLO1100_RS12130 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS12135 PF06165 Glycosyltransferase family 36 CLO1100_RS12135 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CLO1100_RS12140 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS12145 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS12155 PF00072 Response regulator receiver domain CLO1100_RS12155 PF00072 Response regulator receiver domain CLO1100_RS12155 PF12833 Helix-turn-helix domain CLO1100_RS12155 PF12833 Helix-turn-helix domain CLO1100_RS12160 PF06580 Histidine kinase CLO1100_RS12160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS12160 PF00672 HAMP domain CLO1100_RS12160 PF02743 Cache domain CLO1100_RS12165 PF01547 Bacterial extracellular solute-binding protein CLO1100_RS12170 PF10431 C-terminal, D2-small domain, of ClpB protein CLO1100_RS12170 PF02861 Clp amino terminal domain, pathogenicity island component CLO1100_RS12170 PF17871 AAA lid domain CLO1100_RS12170 PF00004 ATPase family associated with various cellular activities (AAA) CLO1100_RS12170 PF07724 AAA domain (Cdc48 subfamily) CLO1100_RS12175 PF01384 Phosphate transporter family CLO1100_RS12185 PF17760 UvrA interaction domain CLO1100_RS12185 PF17755 UvrA DNA-binding domain CLO1100_RS12190 PF09515 Thiamine transporter protein (Thia_YuaJ) CLO1100_RS12195 PF09547 Stage IV sporulation protein A (spore_IV_A) CLO1100_RS12205 PF07745 Glycosyl hydrolase family 53 CLO1100_RS12220 PF09547 Stage IV sporulation protein A (spore_IV_A) CLO1100_RS12225 PF01476 LysM domain CLO1100_RS12225 PF00877 NlpC/P60 family CLO1100_RS12230 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CLO1100_RS12230 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CLO1100_RS12235 PF02660 Glycerol-3-phosphate acyltransferase CLO1100_RS12240 PF01926 50S ribosome-binding GTPase CLO1100_RS12240 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CLO1100_RS12250 PF01783 Ribosomal L32p protein family CLO1100_RS12260 PF00871 Acetokinase family CLO1100_RS12265 PF01515 Phosphate acetyl/butaryl transferase CLO1100_RS12275 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLO1100_RS12280 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase CLO1100_RS12280 PF01676 Metalloenzyme superfamily CLO1100_RS12305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS12305 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS12305 PF07689 KaiB domain CLO1100_RS12310 PF00072 Response regulator receiver domain CLO1100_RS12310 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS12340 PF05593 RHS Repeat CLO1100_RS12350 PF00082 Subtilase family CLO1100_RS12350 PF05922 Peptidase inhibitor I9 CLO1100_RS12365 PF00135 Carboxylesterase family CLO1100_RS12380 PF13732 Domain of unknown function (DUF4162) CLO1100_RS12380 PF00005 ABC transporter CLO1100_RS12385 PF08361 MAATS-type transcriptional repressor, C-terminal region CLO1100_RS12385 PF00440 Bacterial regulatory proteins, tetR family CLO1100_RS12390 PF17996 Carbohydrate esterase 2 N-terminal CLO1100_RS12390 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1100_RS12390 PF00404 Dockerin type I domain CLO1100_RS12390 PF00657 GDSL-like Lipase/Acylhydrolase CLO1100_RS12395 PF01812 5-formyltetrahydrofolate cyclo-ligase family CLO1100_RS12410 PF01979 Amidohydrolase family CLO1100_RS12415 PF05221 S-adenosyl-L-homocysteine hydrolase CLO1100_RS12415 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CLO1100_RS12430 PF01479 S4 domain CLO1100_RS12430 PF00849 RNA pseudouridylate synthase CLO1100_RS12435 PF01189 16S rRNA methyltransferase RsmB/F CLO1100_RS12435 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CLO1100_RS12435 PF17126 RsmF rRNA methyltransferase first C-terminal domain CLO1100_RS12445 PF08281 Sigma-70, region 4 CLO1100_RS12445 PF04542 Sigma-70 region 2 CLO1100_RS12455 PF00392 Bacterial regulatory proteins, gntR family CLO1100_RS12455 PF07729 FCD domain CLO1100_RS12460 PF00330 Aconitase family (aconitate hydratase) CLO1100_RS12465 PF00682 HMGL-like CLO1100_RS12470 PF00672 HAMP domain CLO1100_RS12470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS12470 PF02743 Cache domain CLO1100_RS12475 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLO1100_RS12475 PF02843 Phosphoribosylglycinamide synthetase, C domain CLO1100_RS12475 PF02844 Phosphoribosylglycinamide synthetase, N domain CLO1100_RS12480 PF02142 MGS-like domain CLO1100_RS12480 PF01808 AICARFT/IMPCHase bienzyme CLO1100_RS12485 PF00551 Formyl transferase CLO1100_RS12490 PF00586 AIR synthase related protein, N-terminal domain CLO1100_RS12490 PF02769 AIR synthase related protein, C-terminal domain CLO1100_RS12495 PF00156 Phosphoribosyl transferase domain CLO1100_RS12500 PF00731 AIR carboxylase CLO1100_RS12515 PF08402 TOBE domain CLO1100_RS12515 PF00005 ABC transporter CLO1100_RS12520 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS12530 PF00682 HMGL-like CLO1100_RS12535 PF00682 HMGL-like CLO1100_RS12545 PF02579 Dinitrogenase iron-molybdenum cofactor CLO1100_RS12545 PF04055 Radical SAM superfamily CLO1100_RS12550 PF00148 Nitrogenase component 1 type Oxidoreductase CLO1100_RS12555 PF00148 Nitrogenase component 1 type Oxidoreductase CLO1100_RS12560 PF00148 Nitrogenase component 1 type Oxidoreductase CLO1100_RS12565 PF00543 Nitrogen regulatory protein P-II CLO1100_RS12575 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CLO1100_RS12590 PF01791 DeoC/LacD family aldolase CLO1100_RS12605 PF00072 Response regulator receiver domain CLO1100_RS12605 PF01339 CheB methylesterase CLO1100_RS12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS12610 PF00989 PAS fold CLO1100_RS12610 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS12615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLO1100_RS12615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLO1100_RS12625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLO1100_RS12625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLO1100_RS12630 PF00877 NlpC/P60 family CLO1100_RS12630 PF08239 Bacterial SH3 domain CLO1100_RS12630 PF01476 LysM domain CLO1100_RS12635 PF00107 Zinc-binding dehydrogenase CLO1100_RS12635 PF08240 Alcohol dehydrogenase GroES-like domain CLO1100_RS12645 PF02653 Branched-chain amino acid transport system / permease component CLO1100_RS12650 PF00005 ABC transporter CLO1100_RS12680 PF17676 LD-carboxypeptidase C-terminal domain CLO1100_RS12680 PF02016 LD-carboxypeptidase N-terminal domain CLO1100_RS12710 PF00501 AMP-binding enzyme CLO1100_RS12710 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS12710 PF00668 Condensation domain CLO1100_RS12710 PF00550 Phosphopantetheine attachment site CLO1100_RS12710 PF00975 Thioesterase domain CLO1100_RS12715 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS12715 PF00668 Condensation domain CLO1100_RS12715 PF00550 Phosphopantetheine attachment site CLO1100_RS12715 PF00975 Thioesterase domain CLO1100_RS12715 PF00501 AMP-binding enzyme CLO1100_RS12720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLO1100_RS12720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLO1100_RS12720 PF02770 Acyl-CoA dehydrogenase, middle domain CLO1100_RS12735 PF00117 Glutamine amidotransferase class-I CLO1100_RS12735 PF00958 GMP synthase C terminal domain CLO1100_RS12735 PF02540 NAD synthase CLO1100_RS12740 PF04055 Radical SAM superfamily CLO1100_RS12740 PF16199 Radical_SAM C-terminal domain CLO1100_RS12745 PF01969 Protein of unknown function DUF111 CLO1100_RS12750 PF00731 AIR carboxylase CLO1100_RS12755 PF00472 RF-1 domain CLO1100_RS12755 PF03462 PCRF domain CLO1100_RS12765 PF00155 Aminotransferase class I and II CLO1100_RS12770 PF01037 Lrp/AsnC ligand binding domain CLO1100_RS12780 PF00085 Thioredoxin CLO1100_RS12790 PF12708 Pectate lyase superfamily protein CLO1100_RS12790 PF09992 Phosphodiester glycosidase CLO1100_RS12800 PF11897 Protein of unknown function (DUF3417) CLO1100_RS12800 PF00343 Carbohydrate phosphorylase CLO1100_RS12810 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLO1100_RS12825 PF02638 Glycosyl hydrolase-like 10 CLO1100_RS12845 PF01116 Fructose-bisphosphate aldolase class-II CLO1100_RS12850 PF00365 Phosphofructokinase CLO1100_RS12855 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLO1100_RS12855 PF17203 Single cache domain 3 CLO1100_RS12855 PF00989 PAS fold CLO1100_RS12855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS12860 PF01957 NfeD-like C-terminal, partner-binding CLO1100_RS12860 PF01972 Serine dehydrogenase proteinase CLO1100_RS12865 PF12127 SigmaW regulon antibacterial CLO1100_RS12875 PF04397 LytTr DNA-binding domain CLO1100_RS12875 PF00072 Response regulator receiver domain CLO1100_RS12885 PF01228 Glycine radical CLO1100_RS12885 PF02901 Pyruvate formate lyase-like CLO1100_RS12895 PF02927 Cellulase N-terminal ig-like domain CLO1100_RS12895 PF00759 Glycosyl hydrolase family 9 CLO1100_RS12905 PF00248 Aldo/keto reductase family CLO1100_RS12920 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLO1100_RS12920 PF00037 4Fe-4S binding domain CLO1100_RS12920 PF02256 Iron hydrogenase small subunit CLO1100_RS12920 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLO1100_RS12925 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLO1100_RS12925 PF00037 4Fe-4S binding domain CLO1100_RS12925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLO1100_RS12945 PF02743 Cache domain CLO1100_RS12945 PF00672 HAMP domain CLO1100_RS12945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS12950 PF06949 Protein of unknown function (DUF1292) CLO1100_RS12955 PF03652 Holliday junction resolvase CLO1100_RS12960 PF06135 IreB regulatory phosphoprotein CLO1100_RS12965 PF01938 TRAM domain CLO1100_RS12965 PF00919 Uncharacterized protein family UPF0004 CLO1100_RS12965 PF04055 Radical SAM superfamily CLO1100_RS12970 PF00544 Pectate lyase CLO1100_RS12985 PF04463 Protein of unknown function (DUF523) CLO1100_RS12990 PF00575 S1 RNA binding domain CLO1100_RS12990 PF00773 RNB domain CLO1100_RS12990 PF08206 Ribonuclease B OB domain CLO1100_RS12990 PF17876 Cold shock domain CLO1100_RS13000 PF16736 Single Cache-like CLO1100_RS13000 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS13000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS13000 PF00989 PAS fold CLO1100_RS13005 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS13005 PF00072 Response regulator receiver domain CLO1100_RS13010 PF13739 Deacetylase PdaC CLO1100_RS13010 PF01522 Polysaccharide deacetylase CLO1100_RS13010 PF11738 Protein of unknown function (DUF3298) CLO1100_RS13020 PF03840 Preprotein translocase SecG subunit CLO1100_RS13025 PF00113 Enolase, C-terminal TIM barrel domain CLO1100_RS13025 PF03952 Enolase, N-terminal domain CLO1100_RS13030 PF12833 Helix-turn-helix domain CLO1100_RS13030 PF06445 GyrI-like small molecule binding domain CLO1100_RS13050 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CLO1100_RS13050 PF01676 Metalloenzyme superfamily CLO1100_RS13055 PF00121 Triosephosphate isomerase CLO1100_RS13055 PF00162 Phosphoglycerate kinase CLO1100_RS13075 PF00005 ABC transporter CLO1100_RS13075 PF00664 ABC transporter transmembrane region CLO1100_RS13075 PF03412 Peptidase C39 family CLO1100_RS13095 PF00072 Response regulator receiver domain CLO1100_RS13095 PF04397 LytTr DNA-binding domain CLO1100_RS13100 PF01043 SecA preprotein cross-linking domain CLO1100_RS13100 PF07516 SecA Wing and Scaffold domain CLO1100_RS13100 PF07517 SecA DEAD-like domain CLO1100_RS13105 PF00288 GHMP kinases N terminal domain CLO1100_RS13105 PF10509 Galactokinase galactose-binding signature CLO1100_RS13105 PF08544 GHMP kinases C terminal CLO1100_RS13110 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CLO1100_RS13110 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CLO1100_RS13115 PF12241 Trans-2-enoyl-CoA reductase catalytic region CLO1100_RS13115 PF07055 Enoyl reductase FAD binding domain CLO1100_RS13115 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CLO1100_RS13125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLO1100_RS13125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLO1100_RS13135 PF01546 Peptidase family M20/M25/M40 CLO1100_RS13135 PF07687 Peptidase dimerisation domain CLO1100_RS13140 PF00588 SpoU rRNA Methylase family CLO1100_RS13150 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CLO1100_RS13155 PF07451 Stage V sporulation protein AD (SpoVAD) CLO1100_RS13160 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CLO1100_RS13170 PF04542 Sigma-70 region 2 CLO1100_RS13170 PF04539 Sigma-70 region 3 CLO1100_RS13170 PF04545 Sigma-70, region 4 CLO1100_RS13175 PF13581 Histidine kinase-like ATPase domain CLO1100_RS13180 PF01740 STAS domain CLO1100_RS13185 PF14527 WhiA LAGLIDADG-like domain CLO1100_RS13185 PF10298 WhiA N-terminal LAGLIDADG-like domain CLO1100_RS13185 PF02650 WhiA C-terminal HTH domain CLO1100_RS13195 PF01933 Uncharacterised protein family UPF0052 CLO1100_RS13200 PF03668 P-loop ATPase protein family CLO1100_RS13205 PF01565 FAD binding domain CLO1100_RS13205 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CLO1100_RS13210 PF02811 PHP domain CLO1100_RS13215 PF02603 HPr Serine kinase N terminus CLO1100_RS13215 PF07475 HPr Serine kinase C-terminal domain CLO1100_RS13220 PF03030 Inorganic H+ pyrophosphatase CLO1100_RS13235 PF04474 Protein of unknown function (DUF554) CLO1100_RS13240 PF13735 tRNA nucleotidyltransferase domain 2 putative CLO1100_RS13240 PF01743 Poly A polymerase head domain CLO1100_RS13240 PF12627 Probable RNA and SrmB- binding site of polymerase A CLO1100_RS13250 PF03741 Integral membrane protein TerC family CLO1100_RS13280 PF02906 Iron only hydrogenase large subunit, C-terminal domain CLO1100_RS13280 PF02256 Iron hydrogenase small subunit CLO1100_RS13280 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLO1100_RS13280 PF00037 4Fe-4S binding domain CLO1100_RS13285 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLO1100_RS13285 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLO1100_RS13285 PF00037 4Fe-4S binding domain CLO1100_RS13315 PF01339 CheB methylesterase CLO1100_RS13315 PF00072 Response regulator receiver domain CLO1100_RS13320 PF03705 CheR methyltransferase, all-alpha domain CLO1100_RS13320 PF01739 CheR methyltransferase, SAM binding domain CLO1100_RS13325 PF02203 Tar ligand binding domain homologue CLO1100_RS13325 PF00672 HAMP domain CLO1100_RS13325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS13330 PF01584 CheW-like domain CLO1100_RS13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS13335 PF01584 CheW-like domain CLO1100_RS13335 PF02895 Signal transducing histidine kinase, homodimeric domain CLO1100_RS13335 PF01627 Hpt domain CLO1100_RS13335 PF07194 P2 response regulator binding domain CLO1100_RS13340 PF00072 Response regulator receiver domain CLO1100_RS13355 PF00072 Response regulator receiver domain CLO1100_RS13355 PF00990 Diguanylate cyclase, GGDEF domain CLO1100_RS13360 PF00395 S-layer homology domain CLO1100_RS13360 PF00331 Glycosyl hydrolase family 10 CLO1100_RS13360 PF02018 Carbohydrate binding domain CLO1100_RS13360 PF06452 Carbohydrate family 9 binding domain-like CLO1100_RS13365 PF02018 Carbohydrate binding domain CLO1100_RS13365 PF06452 Carbohydrate family 9 binding domain-like CLO1100_RS13365 PF00331 Glycosyl hydrolase family 10 CLO1100_RS13365 PF00395 S-layer homology domain CLO1100_RS13370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS13370 PF18698 Histidine kinase sensor domain CLO1100_RS13370 PF00672 HAMP domain CLO1100_RS13370 PF00989 PAS fold CLO1100_RS13370 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS13380 PF00005 ABC transporter CLO1100_RS13385 PF00072 Response regulator receiver domain CLO1100_RS13385 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS13390 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CLO1100_RS13395 PF00501 AMP-binding enzyme CLO1100_RS13395 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS13395 PF00668 Condensation domain CLO1100_RS13395 PF00550 Phosphopantetheine attachment site CLO1100_RS13400 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CLO1100_RS13405 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CLO1100_RS13410 PF00501 AMP-binding enzyme CLO1100_RS13410 PF00550 Phosphopantetheine attachment site CLO1100_RS13410 PF00668 Condensation domain CLO1100_RS13410 PF00975 Thioesterase domain CLO1100_RS13410 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS13415 PF00698 Acyl transferase domain CLO1100_RS13420 PF00501 AMP-binding enzyme CLO1100_RS13420 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS13420 PF00550 Phosphopantetheine attachment site CLO1100_RS13420 PF00668 Condensation domain CLO1100_RS13420 PF18563 TubC N-terminal docking domain CLO1100_RS13425 PF16197 Ketoacyl-synthetase C-terminal extension CLO1100_RS13425 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS13425 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS13425 PF00550 Phosphopantetheine attachment site CLO1100_RS13425 PF00668 Condensation domain CLO1100_RS13425 PF00698 Acyl transferase domain CLO1100_RS13430 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS13430 PF14765 Polyketide synthase dehydratase CLO1100_RS13430 PF16197 Ketoacyl-synthetase C-terminal extension CLO1100_RS13430 PF00501 AMP-binding enzyme CLO1100_RS13430 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS13430 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS13430 PF00550 Phosphopantetheine attachment site CLO1100_RS13430 PF00668 Condensation domain CLO1100_RS13430 PF08659 KR domain CLO1100_RS13440 PF00005 ABC transporter CLO1100_RS13440 PF00664 ABC transporter transmembrane region CLO1100_RS13460 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1100_RS13460 PF00404 Dockerin type I domain CLO1100_RS13480 PF17760 UvrA interaction domain CLO1100_RS13480 PF17755 UvrA DNA-binding domain CLO1100_RS13480 PF00005 ABC transporter CLO1100_RS13490 PF01070 FMN-dependent dehydrogenase CLO1100_RS13505 PF00005 ABC transporter CLO1100_RS13515 PF13186 Iron-sulfur cluster-binding domain CLO1100_RS13515 PF04055 Radical SAM superfamily CLO1100_RS13525 PF06165 Glycosyltransferase family 36 CLO1100_RS13525 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CLO1100_RS13535 PF00005 ABC transporter CLO1100_RS13550 PF00682 HMGL-like CLO1100_RS13560 PF00005 ABC transporter CLO1100_RS13575 PF06445 GyrI-like small molecule binding domain CLO1100_RS13575 PF12833 Helix-turn-helix domain CLO1100_RS13580 PF08003 Protein of unknown function (DUF1698) CLO1100_RS13585 PF00132 Bacterial transferase hexapeptide (six repeats) CLO1100_RS13595 PF12833 Helix-turn-helix domain CLO1100_RS13595 PF06445 GyrI-like small molecule binding domain CLO1100_RS13600 PF01055 Glycosyl hydrolases family 31 CLO1100_RS13605 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS13610 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS13625 PF00480 ROK family CLO1100_RS13635 PF00923 Transaldolase/Fructose-6-phosphate aldolase CLO1100_RS13645 PF00923 Transaldolase/Fructose-6-phosphate aldolase CLO1100_RS13650 PF02502 Ribose/Galactose Isomerase CLO1100_RS13655 PF02779 Transketolase, pyrimidine binding domain CLO1100_RS13655 PF02780 Transketolase, C-terminal domain CLO1100_RS13660 PF00456 Transketolase, thiamine diphosphate binding domain CLO1100_RS13665 PF00465 Iron-containing alcohol dehydrogenase CLO1100_RS13670 PF02734 DAK2 domain CLO1100_RS13675 PF02733 Dak1 domain CLO1100_RS13680 PF00465 Iron-containing alcohol dehydrogenase CLO1100_RS13685 PF12833 Helix-turn-helix domain CLO1100_RS13695 PF00472 RF-1 domain CLO1100_RS13705 PF12833 Helix-turn-helix domain CLO1100_RS13715 PF00404 Dockerin type I domain CLO1100_RS13720 PF12849 PBP superfamily domain CLO1100_RS13730 PF01380 SIS domain CLO1100_RS13745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLO1100_RS13745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLO1100_RS13745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLO1100_RS13745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLO1100_RS13760 PF02457 DisA bacterial checkpoint controller nucleotide-binding CLO1100_RS13770 PF02540 NAD synthase CLO1100_RS13770 PF00795 Carbon-nitrogen hydrolase CLO1100_RS13775 PF00266 Aminotransferase class-V CLO1100_RS13780 PF00133 tRNA synthetases class I (I, L, M and V) CLO1100_RS13780 PF08264 Anticodon-binding domain of tRNA CLO1100_RS13780 PF10458 Valyl tRNA synthetase tRNA binding arm CLO1100_RS13795 PF01594 AI-2E family transporter CLO1100_RS13815 PF00664 ABC transporter transmembrane region CLO1100_RS13815 PF00005 ABC transporter CLO1100_RS13820 PF00664 ABC transporter transmembrane region CLO1100_RS13820 PF00005 ABC transporter CLO1100_RS13825 PF01047 MarR family CLO1100_RS13830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLO1100_RS13830 PF01842 ACT domain CLO1100_RS13830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLO1100_RS13835 PF00457 Glycosyl hydrolases family 11 CLO1100_RS13855 PF00005 ABC transporter CLO1100_RS13865 PF13190 PDGLE domain CLO1100_RS13865 PF01891 Cobalt uptake substrate-specific transmembrane region CLO1100_RS13875 PF00005 ABC transporter CLO1100_RS13880 PF01238 Phosphomannose isomerase type I CLO1100_RS13890 PF00005 ABC transporter CLO1100_RS13890 PF13732 Domain of unknown function (DUF4162) CLO1100_RS13910 PF00665 Integrase core domain CLO1100_RS13910 PF13333 Integrase core domain CLO1100_RS13915 PF02872 5'-nucleotidase, C-terminal domain CLO1100_RS13915 PF00149 Calcineurin-like phosphoesterase CLO1100_RS13930 PF00892 EamA-like transporter family CLO1100_RS13940 PF18698 Histidine kinase sensor domain CLO1100_RS13940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS13940 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS13940 PF00672 HAMP domain CLO1100_RS13940 PF00989 PAS fold CLO1100_RS13945 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS13945 PF00072 Response regulator receiver domain CLO1100_RS13950 PF09335 SNARE associated Golgi protein CLO1100_RS13960 PF00072 Response regulator receiver domain CLO1100_RS13960 PF04397 LytTr DNA-binding domain CLO1100_RS13975 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLO1100_RS13975 PF10371 Domain of unknown function CLO1100_RS13975 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLO1100_RS13975 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLO1100_RS13975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLO1100_RS13980 PF00005 ABC transporter CLO1100_RS13995 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS14000 PF00072 Response regulator receiver domain CLO1100_RS14000 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS14005 PF01297 Zinc-uptake complex component A periplasmic CLO1100_RS14010 PF00294 pfkB family carbohydrate kinase CLO1100_RS14015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS14015 PF00672 HAMP domain CLO1100_RS14015 PF18698 Histidine kinase sensor domain CLO1100_RS14015 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS14015 PF00989 PAS fold CLO1100_RS14020 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS14020 PF00072 Response regulator receiver domain CLO1100_RS14025 PF00005 ABC transporter CLO1100_RS14025 PF02687 FtsX-like permease family CLO1100_RS14025 PF12704 MacB-like periplasmic core domain CLO1100_RS14030 PF00005 ABC transporter CLO1100_RS14035 PF01270 Glycosyl hydrolases family 8 CLO1100_RS14040 PF01544 CorA-like Mg2+ transporter protein CLO1100_RS14055 PF02390 Putative methyltransferase CLO1100_RS14060 PF02673 Bacitracin resistance protein BacA CLO1100_RS14070 PF00665 Integrase core domain CLO1100_RS14070 PF13333 Integrase core domain CLO1100_RS14080 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS14080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLO1100_RS14085 PF01022 Bacterial regulatory protein, arsR family CLO1100_RS14115 PF00109 Beta-ketoacyl synthase, N-terminal domain CLO1100_RS14115 PF02801 Beta-ketoacyl synthase, C-terminal domain CLO1100_RS14130 PF00005 ABC transporter CLO1100_RS14135 PF07977 FabA-like domain CLO1100_RS14140 PF00550 Phosphopantetheine attachment site CLO1100_RS14150 PF00698 Acyl transferase domain CLO1100_RS14175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLO1100_RS14175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLO1100_RS14180 PF01915 Glycosyl hydrolase family 3 C-terminal domain CLO1100_RS14180 PF00933 Glycosyl hydrolase family 3 N terminal domain CLO1100_RS14180 PF14310 Fibronectin type III-like domain CLO1100_RS14185 PF00248 Aldo/keto reductase family CLO1100_RS14190 PF00072 Response regulator receiver domain CLO1100_RS14190 PF12833 Helix-turn-helix domain CLO1100_RS14195 PF02743 Cache domain CLO1100_RS14195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS14195 PF06580 Histidine kinase CLO1100_RS14195 PF00672 HAMP domain CLO1100_RS14205 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS14210 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS14220 PF03062 MBOAT, membrane-bound O-acyltransferase family CLO1100_RS14230 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLO1100_RS14235 PF16653 Saccharopine dehydrogenase C-terminal domain CLO1100_RS14235 PF03435 Saccharopine dehydrogenase NADP binding domain CLO1100_RS14250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLO1100_RS14255 PF04239 Protein of unknown function (DUF421) CLO1100_RS14265 PF04239 Protein of unknown function (DUF421) CLO1100_RS14275 PF17810 Arginine decarboxylase helical bundle domain CLO1100_RS14275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLO1100_RS14275 PF17944 Arginine decarboxylase C-terminal helical extension CLO1100_RS14280 PF07690 Major Facilitator Superfamily CLO1100_RS14285 PF07690 Major Facilitator Superfamily CLO1100_RS14290 PF05977 Transmembrane secretion effector CLO1100_RS14305 PF02424 ApbE family CLO1100_RS14330 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS14335 PF01476 LysM domain CLO1100_RS14335 PF00704 Glycosyl hydrolases family 18 CLO1100_RS14340 PF00753 Metallo-beta-lactamase superfamily CLO1100_RS14345 PF13823 Alcohol dehydrogenase GroES-associated CLO1100_RS14345 PF00107 Zinc-binding dehydrogenase CLO1100_RS14345 PF08240 Alcohol dehydrogenase GroES-like domain CLO1100_RS14350 PF05067 Manganese containing catalase CLO1100_RS14375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLO1100_RS14375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS14380 PF01022 Bacterial regulatory protein, arsR family CLO1100_RS14395 PF00672 HAMP domain CLO1100_RS14395 PF12729 Four helix bundle sensory module for signal transduction CLO1100_RS14395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS14405 PF00899 ThiF family CLO1100_RS14405 PF00581 Rhodanese-like domain CLO1100_RS14410 PF05690 Thiazole biosynthesis protein ThiG CLO1100_RS14415 PF04055 Radical SAM superfamily CLO1100_RS14415 PF06968 Biotin and Thiamin Synthesis associated domain CLO1100_RS14420 PF02581 Thiamine monophosphate synthase CLO1100_RS14440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CLO1100_RS14440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CLO1100_RS14440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CLO1100_RS14465 PF00150 Cellulase (glycosyl hydrolase family 5) CLO1100_RS14465 PF00404 Dockerin type I domain CLO1100_RS14470 PF01588 Putative tRNA binding domain CLO1100_RS14470 PF09334 tRNA synthetases class I (M) CLO1100_RS14490 PF03352 Methyladenine glycosylase CLO1100_RS14505 PF01032 FecCD transport family CLO1100_RS14510 PF00005 ABC transporter CLO1100_RS14520 PF16363 GDP-mannose 4,6 dehydratase CLO1100_RS14530 PF00290 Tryptophan synthase alpha chain CLO1100_RS14535 PF00465 Iron-containing alcohol dehydrogenase CLO1100_RS14540 PF00290 Tryptophan synthase alpha chain CLO1100_RS14545 PF01048 Phosphorylase superfamily CLO1100_RS14555 PF00857 Isochorismatase family CLO1100_RS14560 PF02653 Branched-chain amino acid transport system / permease component CLO1100_RS14565 PF02653 Branched-chain amino acid transport system / permease component CLO1100_RS14570 PF00005 ABC transporter CLO1100_RS14580 PF07702 UTRA domain CLO1100_RS14580 PF00392 Bacterial regulatory proteins, gntR family CLO1100_RS14585 PF04972 BON domain CLO1100_RS14585 PF01476 LysM domain CLO1100_RS14590 PF02653 Branched-chain amino acid transport system / permease component CLO1100_RS14595 PF02653 Branched-chain amino acid transport system / permease component CLO1100_RS14600 PF00005 ABC transporter CLO1100_RS14605 PF02608 ABC transporter substrate-binding protein PnrA-like CLO1100_RS14610 PF13419 Haloacid dehalogenase-like hydrolase CLO1100_RS14615 PF02308 MgtC family CLO1100_RS14620 PF03009 Glycerophosphoryl diester phosphodiesterase family CLO1100_RS14625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLO1100_RS14625 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLO1100_RS14630 PF08240 Alcohol dehydrogenase GroES-like domain CLO1100_RS14630 PF00107 Zinc-binding dehydrogenase CLO1100_RS14640 PF01261 Xylose isomerase-like TIM barrel CLO1100_RS14645 PF13416 Bacterial extracellular solute-binding protein CLO1100_RS14650 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS14655 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS14660 PF00356 Bacterial regulatory proteins, lacI family CLO1100_RS14665 PF01134 Glucose inhibited division protein A CLO1100_RS14665 PF13932 GidA associated domain CLO1100_RS14670 PF06445 GyrI-like small molecule binding domain CLO1100_RS14670 PF12833 Helix-turn-helix domain CLO1100_RS14685 PF03773 Predicted permease CLO1100_RS14690 PF01022 Bacterial regulatory protein, arsR family CLO1100_RS14700 PF04055 Radical SAM superfamily CLO1100_RS14720 PF03412 Peptidase C39 family CLO1100_RS14720 PF00664 ABC transporter transmembrane region CLO1100_RS14720 PF00005 ABC transporter CLO1100_RS14725 PF05175 Methyltransferase small domain CLO1100_RS14735 PF13186 Iron-sulfur cluster-binding domain CLO1100_RS14735 PF04055 Radical SAM superfamily CLO1100_RS14740 PF04055 Radical SAM superfamily CLO1100_RS14740 PF02310 B12 binding domain CLO1100_RS14760 PF00005 ABC transporter CLO1100_RS14785 PF01381 Helix-turn-helix CLO1100_RS14790 PF01381 Helix-turn-helix CLO1100_RS14825 PF00701 Dihydrodipicolinate synthetase family CLO1100_RS14830 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS14835 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS14845 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CLO1100_RS14850 PF00392 Bacterial regulatory proteins, gntR family CLO1100_RS14850 PF07702 UTRA domain CLO1100_RS14855 PF04074 YhcH/YjgK/YiaL CLO1100_RS14860 PF00480 ROK family CLO1100_RS14865 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CLO1100_RS14870 PF01979 Amidohydrolase family CLO1100_RS14875 PF00294 pfkB family carbohydrate kinase CLO1100_RS14880 PF08240 Alcohol dehydrogenase GroES-like domain CLO1100_RS14880 PF00107 Zinc-binding dehydrogenase CLO1100_RS14885 PF01261 Xylose isomerase-like TIM barrel CLO1100_RS14890 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS14895 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS14905 PF00072 Response regulator receiver domain CLO1100_RS14905 PF12833 Helix-turn-helix domain CLO1100_RS14910 PF06580 Histidine kinase CLO1100_RS14910 PF02743 Cache domain CLO1100_RS14910 PF00672 HAMP domain CLO1100_RS14910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS14915 PF12833 Helix-turn-helix domain CLO1100_RS14915 PF01497 Periplasmic binding protein CLO1100_RS14920 PF13932 GidA associated domain CLO1100_RS14920 PF01134 Glucose inhibited division protein A CLO1100_RS14925 PF01134 Glucose inhibited division protein A CLO1100_RS14925 PF13932 GidA associated domain CLO1100_RS14940 PF01494 FAD binding domain CLO1100_RS14945 PF01494 FAD binding domain CLO1100_RS14965 PF00005 ABC transporter CLO1100_RS14980 PF00919 Uncharacterized protein family UPF0004 CLO1100_RS14980 PF04055 Radical SAM superfamily CLO1100_RS15055 PF00881 Nitroreductase family CLO1100_RS15070 PF01207 Dihydrouridine synthase (Dus) CLO1100_RS15075 PF00679 Elongation factor G C-terminus CLO1100_RS15075 PF14492 Elongation Factor G, domain II CLO1100_RS15075 PF03764 Elongation factor G, domain IV CLO1100_RS15075 PF00009 Elongation factor Tu GTP binding domain CLO1100_RS15105 PF06445 GyrI-like small molecule binding domain CLO1100_RS15105 PF13411 MerR HTH family regulatory protein CLO1100_RS15110 PF07690 Major Facilitator Superfamily CLO1100_RS15115 PF00356 Bacterial regulatory proteins, lacI family CLO1100_RS15125 PF00005 ABC transporter CLO1100_RS15125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLO1100_RS15130 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS15130 PF12911 N-terminal TM domain of oligopeptide transport permease C CLO1100_RS15135 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS15140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLO1100_RS15150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLO1100_RS15155 PF04616 Glycosyl hydrolases family 43 CLO1100_RS15155 PF03422 Carbohydrate binding module (family 6) CLO1100_RS15165 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CLO1100_RS15170 PF00392 Bacterial regulatory proteins, gntR family CLO1100_RS15175 PF00005 ABC transporter CLO1100_RS15190 PF00005 ABC transporter CLO1100_RS15205 PF02595 Glycerate kinase family CLO1100_RS15210 PF00365 Phosphofructokinase CLO1100_RS15215 PF02666 Phosphatidylserine decarboxylase CLO1100_RS15220 PF04616 Glycosyl hydrolases family 43 CLO1100_RS15245 PF00072 Response regulator receiver domain CLO1100_RS15245 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS15250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS15250 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS15255 PF13847 Methyltransferase domain CLO1100_RS15260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS15260 PF02743 Cache domain CLO1100_RS15260 PF00672 HAMP domain CLO1100_RS15270 PF02683 Cytochrome C biogenesis protein transmembrane region CLO1100_RS15285 PF00707 Translation initiation factor IF-3, C-terminal domain CLO1100_RS15285 PF05198 Translation initiation factor IF-3, N-terminal domain CLO1100_RS15290 PF00501 AMP-binding enzyme CLO1100_RS15295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS15295 PF00672 HAMP domain CLO1100_RS15295 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS15300 PF00072 Response regulator receiver domain CLO1100_RS15300 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS15310 PF00395 S-layer homology domain CLO1100_RS15315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLO1100_RS15315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLO1100_RS15320 PF00266 Aminotransferase class-V CLO1100_RS15330 PF02915 Rubrerythrin CLO1100_RS15335 PF07833 Copper amine oxidase N-terminal domain CLO1100_RS15340 PF01545 Cation efflux family CLO1100_RS15340 PF16916 Dimerisation domain of Zinc Transporter CLO1100_RS15345 PF04286 Protein of unknown function (DUF445) CLO1100_RS15350 PF01926 50S ribosome-binding GTPase CLO1100_RS15355 PF01554 MatE CLO1100_RS15360 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS15360 PF00501 AMP-binding enzyme CLO1100_RS15370 PF01872 RibD C-terminal domain CLO1100_RS15385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLO1100_RS15385 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS15390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS15395 PF00465 Iron-containing alcohol dehydrogenase CLO1100_RS15400 PF02915 Rubrerythrin CLO1100_RS15405 PF13416 Bacterial extracellular solute-binding protein CLO1100_RS15410 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS15415 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS15420 PF08402 TOBE domain CLO1100_RS15420 PF00005 ABC transporter CLO1100_RS15425 PF07883 Cupin domain CLO1100_RS15425 PF01381 Helix-turn-helix CLO1100_RS15430 PF00005 ABC transporter CLO1100_RS15435 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS15440 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLO1100_RS15445 PF01551 Peptidase family M23 CLO1100_RS15450 PF01522 Polysaccharide deacetylase CLO1100_RS15460 PF00005 ABC transporter CLO1100_RS15465 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS15475 PF03180 NLPA lipoprotein CLO1100_RS15480 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS15485 PF09383 NIL domain CLO1100_RS15485 PF00005 ABC transporter CLO1100_RS15490 PF02082 Transcriptional regulator CLO1100_RS15495 PF02540 NAD synthase CLO1100_RS15500 PF01751 Toprim domain CLO1100_RS15500 PF01131 DNA topoisomerase CLO1100_RS15505 PF13419 Haloacid dehalogenase-like hydrolase CLO1100_RS15510 PF00480 ROK family CLO1100_RS15515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLO1100_RS15515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLO1100_RS15520 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS15520 PF00501 AMP-binding enzyme CLO1100_RS15540 PF04015 Domain of unknown function (DUF362) CLO1100_RS15545 PF04055 Radical SAM superfamily CLO1100_RS15545 PF02310 B12 binding domain CLO1100_RS15550 PF04055 Radical SAM superfamily CLO1100_RS15550 PF02310 B12 binding domain CLO1100_RS15555 PF16861 Carbamoyltransferase C-terminus CLO1100_RS15555 PF02543 Carbamoyltransferase N-terminus CLO1100_RS15580 PF04055 Radical SAM superfamily CLO1100_RS15580 PF02310 B12 binding domain CLO1100_RS15585 PF00005 ABC transporter CLO1100_RS15600 PF06463 Molybdenum Cofactor Synthesis C CLO1100_RS15600 PF04055 Radical SAM superfamily CLO1100_RS15615 PF00550 Phosphopantetheine attachment site CLO1100_RS15620 PF02585 GlcNAc-PI de-N-acetylase CLO1100_RS15625 PF00535 Glycosyl transferase family 2 CLO1100_RS15635 PF00483 Nucleotidyl transferase CLO1100_RS15635 PF01050 Mannose-6-phosphate isomerase CLO1100_RS15655 PF04616 Glycosyl hydrolases family 43 CLO1100_RS15665 PF00082 Subtilase family CLO1100_RS15670 PF00005 ABC transporter CLO1100_RS15710 PF00294 pfkB family carbohydrate kinase CLO1100_RS15715 PF00107 Zinc-binding dehydrogenase CLO1100_RS15715 PF08240 Alcohol dehydrogenase GroES-like domain CLO1100_RS15720 PF16912 Glucose dehydrogenase C-terminus CLO1100_RS15720 PF08240 Alcohol dehydrogenase GroES-like domain CLO1100_RS15725 PF08240 Alcohol dehydrogenase GroES-like domain CLO1100_RS15725 PF00107 Zinc-binding dehydrogenase CLO1100_RS15730 PF01134 Glucose inhibited division protein A CLO1100_RS15730 PF13932 GidA associated domain CLO1100_RS15735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLO1100_RS15735 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS15740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLO1100_RS15740 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS15745 PF01547 Bacterial extracellular solute-binding protein CLO1100_RS15750 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS15755 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS15760 PF02743 Cache domain CLO1100_RS15760 PF00672 HAMP domain CLO1100_RS15760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS15760 PF06580 Histidine kinase CLO1100_RS15765 PF08448 PAS fold CLO1100_RS15765 PF00072 Response regulator receiver domain CLO1100_RS15765 PF13188 PAS domain CLO1100_RS15765 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS15765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS15770 PF13932 GidA associated domain CLO1100_RS15770 PF01134 Glucose inhibited division protein A CLO1100_RS15780 PF01261 Xylose isomerase-like TIM barrel CLO1100_RS15810 PF00005 ABC transporter CLO1100_RS15815 PF01022 Bacterial regulatory protein, arsR family CLO1100_RS15820 PF04055 Radical SAM superfamily CLO1100_RS15820 PF06463 Molybdenum Cofactor Synthesis C CLO1100_RS15825 PF00550 Phosphopantetheine attachment site CLO1100_RS15825 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS15825 PF00668 Condensation domain CLO1100_RS15825 PF00501 AMP-binding enzyme CLO1100_RS15830 PF00550 Phosphopantetheine attachment site CLO1100_RS15835 PF00501 AMP-binding enzyme CLO1100_RS15850 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS15850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS15860 PF00005 ABC transporter CLO1100_RS15865 PF00072 Response regulator receiver domain CLO1100_RS15865 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS15870 PF00331 Glycosyl hydrolase family 10 CLO1100_RS15875 PF07702 UTRA domain CLO1100_RS15875 PF00392 Bacterial regulatory proteins, gntR family CLO1100_RS15880 PF01380 SIS domain CLO1100_RS15895 PF00395 S-layer homology domain CLO1100_RS15895 PF00963 Cohesin domain CLO1100_RS15900 PF13580 SIS domain CLO1100_RS15905 PF12804 MobA-like NTP transferase domain CLO1100_RS15905 PF00132 Bacterial transferase hexapeptide (six repeats) CLO1100_RS15905 PF14602 Hexapeptide repeat of succinyl-transferase CLO1100_RS15920 PF02056 Family 4 glycosyl hydrolase CLO1100_RS15920 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLO1100_RS15925 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLO1100_RS15935 PF02378 Phosphotransferase system, EIIC CLO1100_RS15940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLO1100_RS15945 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLO1100_RS15955 PF00391 PEP-utilising enzyme, mobile domain CLO1100_RS15955 PF05524 PEP-utilising enzyme, N-terminal CLO1100_RS15955 PF02896 PEP-utilising enzyme, TIM barrel domain CLO1100_RS15960 PF00874 PRD domain CLO1100_RS15960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLO1100_RS15960 PF05043 Mga helix-turn-helix domain CLO1100_RS15960 PF08279 HTH domain CLO1100_RS15965 PF13509 S1 domain CLO1100_RS15965 PF17783 CvfB-like winged helix domain CLO1100_RS15970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLO1100_RS15970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLO1100_RS15985 PF13419 Haloacid dehalogenase-like hydrolase CLO1100_RS15990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CLO1100_RS15995 PF01761 3-dehydroquinate synthase CLO1100_RS16000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLO1100_RS16005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLO1100_RS16035 PF16841 Ca-dependent carbohydrate-binding module xylan-binding CLO1100_RS16035 PF00457 Glycosyl hydrolases family 11 CLO1100_RS16035 PF01522 Polysaccharide deacetylase CLO1100_RS16035 PF02013 Cellulose or protein binding domain CLO1100_RS16040 PF00457 Glycosyl hydrolases family 11 CLO1100_RS16045 PF13186 Iron-sulfur cluster-binding domain CLO1100_RS16045 PF04055 Radical SAM superfamily CLO1100_RS16110 PF00072 Response regulator receiver domain CLO1100_RS16110 PF04397 LytTr DNA-binding domain CLO1100_RS16115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS16115 PF06580 Histidine kinase CLO1100_RS16120 PF00395 S-layer homology domain CLO1100_RS16145 PF00293 NUDIX domain CLO1100_RS16150 PF13419 Haloacid dehalogenase-like hydrolase CLO1100_RS16155 PF02441 Flavoprotein CLO1100_RS16160 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CLO1100_RS16165 PF00156 Phosphoribosyl transferase domain CLO1100_RS16170 PF02649 Type I GTP cyclohydrolase folE2 CLO1100_RS16175 PF04055 Radical SAM superfamily CLO1100_RS16180 PF01242 6-pyruvoyl tetrahydropterin synthase CLO1100_RS16190 PF00404 Dockerin type I domain CLO1100_RS16190 PF00331 Glycosyl hydrolase family 10 CLO1100_RS16190 PF03422 Carbohydrate binding module (family 6) CLO1100_RS16190 PF00756 Putative esterase CLO1100_RS16195 PF12833 Helix-turn-helix domain CLO1100_RS16195 PF01497 Periplasmic binding protein CLO1100_RS16230 PF01381 Helix-turn-helix CLO1100_RS16250 PF00005 ABC transporter CLO1100_RS16320 PF05593 RHS Repeat CLO1100_RS16330 PF05593 RHS Repeat CLO1100_RS16350 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CLO1100_RS16350 PF12008 Type I restriction and modification enzyme - subunit R C terminal CLO1100_RS16350 PF18766 SWI2/SNF2 ATPase CLO1100_RS16355 PF01420 Type I restriction modification DNA specificity domain CLO1100_RS16400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS16400 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS16405 PF00145 C-5 cytosine-specific DNA methylase CLO1100_RS16415 PF00145 C-5 cytosine-specific DNA methylase CLO1100_RS16425 PF02374 Anion-transporting ATPase CLO1100_RS16430 PF06953 Arsenical resistance operon trans-acting repressor ArsD CLO1100_RS16435 PF01758 Sodium Bile acid symporter family CLO1100_RS16440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLO1100_RS16440 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS16445 PF01022 Bacterial regulatory protein, arsR family CLO1100_RS16460 PF13847 Methyltransferase domain CLO1100_RS16465 PF01047 MarR family CLO1100_RS16485 PF02796 Helix-turn-helix domain of resolvase CLO1100_RS16485 PF00239 Resolvase, N terminal domain CLO1100_RS16590 PF00145 C-5 cytosine-specific DNA methylase CLO1100_RS16645 PF00437 Type II/IV secretion system protein CLO1100_RS16660 PF06750 Bacterial Peptidase A24 N-terminal domain CLO1100_RS16660 PF01478 Type IV leader peptidase family CLO1100_RS16670 PF04026 SpoVG CLO1100_RS16700 PF02086 D12 class N6 adenine-specific DNA methyltransferase CLO1100_RS16715 PF01396 Topoisomerase DNA binding C4 zinc finger CLO1100_RS16795 PF00239 Resolvase, N terminal domain CLO1100_RS16795 PF02796 Helix-turn-helix domain of resolvase CLO1100_RS16810 PF14251 Domain of unknown function (DUF4346) CLO1100_RS16815 PF02535 ZIP Zinc transporter CLO1100_RS16820 PF00403 Heavy-metal-associated domain CLO1100_RS16825 PF00403 Heavy-metal-associated domain CLO1100_RS16830 PF01022 Bacterial regulatory protein, arsR family CLO1100_RS16835 PF02374 Anion-transporting ATPase CLO1100_RS16845 PF02374 Anion-transporting ATPase CLO1100_RS16850 PF06953 Arsenical resistance operon trans-acting repressor ArsD CLO1100_RS16855 PF01758 Sodium Bile acid symporter family CLO1100_RS16860 PF01022 Bacterial regulatory protein, arsR family CLO1100_RS16865 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLO1100_RS16865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLO1100_RS16870 PF01022 Bacterial regulatory protein, arsR family CLO1100_RS16880 PF13847 Methyltransferase domain CLO1100_RS16885 PF01047 MarR family CLO1100_RS16990 PF00145 C-5 cytosine-specific DNA methylase CLO1100_RS17020 PF00690 Cation transporter/ATPase, N-terminus CLO1100_RS17020 PF00689 Cation transporting ATPase, C-terminus CLO1100_RS17080 PF01478 Type IV leader peptidase family CLO1100_RS17080 PF06750 Bacterial Peptidase A24 N-terminal domain CLO1100_RS17090 PF04026 SpoVG CLO1100_RS17120 PF02086 D12 class N6 adenine-specific DNA methyltransferase CLO1100_RS17160 PF00011 Hsp20/alpha crystallin family CLO1100_RS17210 PF01612 3'-5' exonuclease CLO1100_RS17210 PF00476 DNA polymerase family A CLO1100_RS17210 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLO1100_RS17210 PF01367 5'-3' exonuclease, C-terminal SAM fold CLO1100_RS17245 PF05105 Bacteriophage holin family CLO1100_RS17320 PF04860 Phage portal protein CLO1100_RS17330 PF03354 Phage Terminase CLO1100_RS17360 PF00145 C-5 cytosine-specific DNA methylase CLO1100_RS17365 PF01555 DNA methylase CLO1100_RS17370 PF02772 S-adenosylmethionine synthetase, central domain CLO1100_RS17370 PF00438 S-adenosylmethionine synthetase, N-terminal domain CLO1100_RS17370 PF02773 S-adenosylmethionine synthetase, C-terminal domain CLO1100_RS17435 PF12008 Type I restriction and modification enzyme - subunit R C terminal CLO1100_RS17435 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CLO1100_RS17435 PF18766 SWI2/SNF2 ATPase CLO1100_RS17445 PF02384 N-6 DNA Methylase CLO1100_RS17445 PF12161 HsdM N-terminal domain CLO1100_RS17455 PF01938 TRAM domain CLO1100_RS17455 PF05958 tRNA (Uracil-5-)-methyltransferase CLO1100_RS17465 PF03167 Uracil DNA glycosylase superfamily CLO1100_RS17485 PF00672 HAMP domain CLO1100_RS17485 PF02743 Cache domain CLO1100_RS17485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS17490 PF01551 Peptidase family M23 CLO1100_RS17490 PF04225 Opacity-associated protein A LysM-like domain CLO1100_RS17495 PF00905 Penicillin binding protein transpeptidase domain CLO1100_RS17495 PF00912 Transglycosylase CLO1100_RS17500 PF00696 Amino acid kinase family CLO1100_RS17515 PF03144 Elongation factor Tu domain 2 CLO1100_RS17515 PF00009 Elongation factor Tu GTP binding domain CLO1100_RS17515 PF14492 Elongation Factor G, domain II CLO1100_RS17515 PF00679 Elongation factor G C-terminus CLO1100_RS17515 PF03764 Elongation factor G, domain IV CLO1100_RS17520 PF18152 DAHP synthase ferredoxin-like domain CLO1100_RS17520 PF00793 DAHP synthetase I family CLO1100_RS17525 PF01842 ACT domain CLO1100_RS17525 PF02153 Prephenate dehydrogenase CLO1100_RS17530 PF02629 CoA binding domain CLO1100_RS17530 PF06971 Putative DNA-binding protein N-terminus CLO1100_RS17540 PF00005 ABC transporter CLO1100_RS17540 PF16326 ABC transporter C-terminal domain CLO1100_RS17540 PF12848 ABC transporter CLO1100_RS17545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLO1100_RS17545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLO1100_RS17550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS17550 PF00672 HAMP domain CLO1100_RS17550 PF02743 Cache domain CLO1100_RS17555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLO1100_RS17555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLO1100_RS17560 PF02743 Cache domain CLO1100_RS17560 PF00672 HAMP domain CLO1100_RS17560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS17565 PF01520 N-acetylmuramoyl-L-alanine amidase CLO1100_RS17635 PF00005 ABC transporter CLO1100_RS17655 PF00975 Thioesterase domain CLO1100_RS17655 PF00550 Phosphopantetheine attachment site CLO1100_RS17655 PF00668 Condensation domain CLO1100_RS17655 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS17655 PF00501 AMP-binding enzyme CLO1100_RS17660 PF00919 Uncharacterized protein family UPF0004 CLO1100_RS17660 PF04055 Radical SAM superfamily CLO1100_RS17660 PF18693 TRAM domain CLO1100_RS17675 PF03063 Prismane/CO dehydrogenase family CLO1100_RS17705 PF01430 Hsp33 protein CLO1100_RS17710 PF00313 'Cold-shock' DNA-binding domain CLO1100_RS17715 PF05175 Methyltransferase small domain CLO1100_RS17715 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus CLO1100_RS17725 PF13180 PDZ domain CLO1100_RS17725 PF03572 Peptidase family S41 CLO1100_RS17725 PF01471 Putative peptidoglycan binding domain CLO1100_RS17730 PF04225 Opacity-associated protein A LysM-like domain CLO1100_RS17730 PF01551 Peptidase family M23 CLO1100_RS17735 PF18075 FtsX extracellular domain CLO1100_RS17735 PF02687 FtsX-like permease family CLO1100_RS17740 PF00005 ABC transporter CLO1100_RS17745 PF05651 Putative sugar diacid recognition CLO1100_RS17745 PF17853 GGDEF-like domain CLO1100_RS17745 PF13556 PucR C-terminal helix-turn-helix domain CLO1100_RS17775 PF17912 MalK OB fold domain CLO1100_RS17775 PF00005 ABC transporter CLO1100_RS17775 PF03459 TOBE domain CLO1100_RS17780 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLO1100_RS17785 PF00696 Amino acid kinase family CLO1100_RS17790 PF00202 Aminotransferase class-III CLO1100_RS17795 PF00117 Glutamine amidotransferase class-I CLO1100_RS17795 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CLO1100_RS17800 PF02142 MGS-like domain CLO1100_RS17800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLO1100_RS17800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLO1100_RS17805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLO1100_RS17805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLO1100_RS17820 PF03063 Prismane/CO dehydrogenase family CLO1100_RS17830 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CLO1100_RS17830 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLO1100_RS17835 PF03808 Glycosyl transferase WecB/TagA/CpsF family CLO1100_RS17850 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CLO1100_RS17855 PF01402 Ribbon-helix-helix protein, copG family CLO1100_RS17860 PF01168 Alanine racemase, N-terminal domain CLO1100_RS17860 PF00842 Alanine racemase, C-terminal domain CLO1100_RS17865 PF03853 YjeF-related protein N-terminus CLO1100_RS17865 PF01256 Carbohydrate kinase CLO1100_RS17875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CLO1100_RS17875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CLO1100_RS17875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CLO1100_RS17905 PF00293 NUDIX domain CLO1100_RS17905 PF09297 NADH pyrophosphatase zinc ribbon domain CLO1100_RS17905 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CLO1100_RS17910 PF00011 Hsp20/alpha crystallin family CLO1100_RS17915 PF01943 Polysaccharide biosynthesis protein CLO1100_RS17915 PF14667 Polysaccharide biosynthesis C-terminal domain CLO1100_RS17920 PF00877 NlpC/P60 family CLO1100_RS17920 PF01476 LysM domain CLO1100_RS17925 PF01520 N-acetylmuramoyl-L-alanine amidase CLO1100_RS17930 PF01207 Dihydrouridine synthase (Dus) CLO1100_RS17970 PF00239 Resolvase, N terminal domain CLO1100_RS17970 PF02796 Helix-turn-helix domain of resolvase CLO1100_RS18030 PF10997 Alternate to MurJ CLO1100_RS18045 PF07228 Stage II sporulation protein E (SpoIIE) CLO1100_RS18050 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CLO1100_RS18050 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CLO1100_RS18050 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CLO1100_RS18055 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CLO1100_RS18055 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CLO1100_RS18090 PF13180 PDZ domain CLO1100_RS18100 PF01625 Peptide methionine sulfoxide reductase CLO1100_RS18105 PF04456 Protein of unknown function (DUF503) CLO1100_RS18115 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CLO1100_RS18120 PF02156 Glycosyl hydrolase family 26 CLO1100_RS18125 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS18130 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS18140 PF00356 Bacterial regulatory proteins, lacI family CLO1100_RS18145 PF00356 Bacterial regulatory proteins, lacI family CLO1100_RS18150 PF04041 beta-1,4-mannooligosaccharide phosphorylase CLO1100_RS18160 PF04041 beta-1,4-mannooligosaccharide phosphorylase CLO1100_RS18165 PF05448 Acetyl xylan esterase (AXE1) CLO1100_RS18175 PF03773 Predicted permease CLO1100_RS18180 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLO1100_RS18180 PF07683 Cobalamin synthesis protein cobW C-terminal domain CLO1100_RS18185 PF01475 Ferric uptake regulator family CLO1100_RS18190 PF13302 Acetyltransferase (GNAT) domain CLO1100_RS18215 PF00501 AMP-binding enzyme CLO1100_RS18215 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS18220 PF00890 FAD binding domain CLO1100_RS18220 PF04205 FMN-binding domain CLO1100_RS18225 PF02424 ApbE family CLO1100_RS18230 PF00440 Bacterial regulatory proteins, tetR family CLO1100_RS18230 PF17925 Tetracyclin repressor-like, C-terminal domain CLO1100_RS18235 PF03845 Spore germination protein CLO1100_RS18245 PF05504 Spore germination B3/ GerAC like, C-terminal CLO1100_RS18250 PF03323 Bacillus/Clostridium GerA spore germination protein CLO1100_RS18260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLO1100_RS18295 PF04865 Baseplate J-like protein CLO1100_RS18315 PF01476 LysM domain CLO1100_RS18315 PF00756 Putative esterase CLO1100_RS18325 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC CLO1100_RS18330 PF09393 Phage tail tube protein CLO1100_RS18350 PF01381 Helix-turn-helix CLO1100_RS18360 PF00575 S1 RNA binding domain CLO1100_RS18380 PF01479 S4 domain CLO1100_RS18385 PF00216 Bacterial DNA-binding protein CLO1100_RS18390 PF03819 MazG nucleotide pyrophosphohydrolase domain CLO1100_RS18395 PF00436 Single-strand binding protein family CLO1100_RS18400 PF15714 Stage V sporulation protein T C-terminal, transcription factor CLO1100_RS18400 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLO1100_RS18405 PF09312 SurA N-terminal domain CLO1100_RS18405 PF00639 PPIC-type PPIASE domain CLO1100_RS18410 PF03461 TRCF domain CLO1100_RS18410 PF00271 Helicase conserved C-terminal domain CLO1100_RS18410 PF02559 CarD-like/TRCF domain CLO1100_RS18410 PF17757 UvrB interaction domain CLO1100_RS18410 PF00270 DEAD/DEAH box helicase CLO1100_RS18415 PF01195 Peptidyl-tRNA hydrolase CLO1100_RS18420 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CLO1100_RS18420 PF14572 Phosphoribosyl synthetase-associated domain CLO1100_RS18425 PF14602 Hexapeptide repeat of succinyl-transferase CLO1100_RS18425 PF00483 Nucleotidyl transferase CLO1100_RS18425 PF00132 Bacterial transferase hexapeptide (six repeats) CLO1100_RS18430 PF04026 SpoVG CLO1100_RS18435 PF00156 Phosphoribosyl transferase domain CLO1100_RS18435 PF09182 Bacterial purine repressor, N-terminal CLO1100_RS18440 PF08245 Mur ligase middle domain CLO1100_RS18440 PF02875 Mur ligase family, glutamate ligase domain CLO1100_RS18440 PF01225 Mur ligase family, catalytic domain CLO1100_RS18445 PF07977 FabA-like domain CLO1100_RS18455 PF10135 Rod binding protein CLO1100_RS18460 PF00460 Flagella basal body rod protein CLO1100_RS18460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLO1100_RS18465 PF00460 Flagella basal body rod protein CLO1100_RS18465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLO1100_RS18475 PF01926 50S ribosome-binding GTPase CLO1100_RS18475 PF12631 MnmE helical domain CLO1100_RS18475 PF10396 GTP-binding protein TrmE N-terminus CLO1100_RS18500 PF00999 Sodium/hydrogen exchanger family CLO1100_RS18505 PF02080 TrkA-C domain CLO1100_RS18515 PF12116 Stage III sporulation protein D CLO1100_RS18525 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CLO1100_RS18535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLO1100_RS18535 PF02403 Seryl-tRNA synthetase N-terminal domain CLO1100_RS18545 PF00155 Aminotransferase class I and II CLO1100_RS18550 PF00291 Pyridoxal-phosphate dependent enzyme CLO1100_RS18560 PF02441 Flavoprotein CLO1100_RS18565 PF06968 Biotin and Thiamin Synthesis associated domain CLO1100_RS18565 PF04055 Radical SAM superfamily CLO1100_RS18575 PF00665 Integrase core domain CLO1100_RS18575 PF13333 Integrase core domain CLO1100_RS18580 PF08000 Bacterial PH domain CLO1100_RS18585 PF00294 pfkB family carbohydrate kinase CLO1100_RS18590 PF01081 KDPG and KHG aldolase CLO1100_RS18595 PF00392 Bacterial regulatory proteins, gntR family CLO1100_RS18595 PF07729 FCD domain CLO1100_RS18605 PF00465 Iron-containing alcohol dehydrogenase CLO1100_RS18610 PF00171 Aldehyde dehydrogenase family CLO1100_RS18610 PF00465 Iron-containing alcohol dehydrogenase CLO1100_RS18615 PF02310 B12 binding domain CLO1100_RS18615 PF02607 B12 binding domain CLO1100_RS18630 PF00005 ABC transporter CLO1100_RS18635 PF01032 FecCD transport family CLO1100_RS18645 PF01676 Metalloenzyme superfamily CLO1100_RS18650 PF09587 Bacterial capsule synthesis protein PGA_cap CLO1100_RS18655 PF00884 Sulfatase CLO1100_RS18685 PF04715 Anthranilate synthase component I, N terminal region CLO1100_RS18685 PF00425 chorismate binding enzyme CLO1100_RS18690 PF02885 Glycosyl transferase family, helical bundle domain CLO1100_RS18690 PF00117 Glutamine amidotransferase class-I CLO1100_RS18690 PF00591 Glycosyl transferase family, a/b domain CLO1100_RS18695 PF02885 Glycosyl transferase family, helical bundle domain CLO1100_RS18695 PF00591 Glycosyl transferase family, a/b domain CLO1100_RS18700 PF00218 Indole-3-glycerol phosphate synthase CLO1100_RS18705 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CLO1100_RS18710 PF00291 Pyridoxal-phosphate dependent enzyme CLO1100_RS18715 PF00290 Tryptophan synthase alpha chain CLO1100_RS18730 PF00535 Glycosyl transferase family 2 CLO1100_RS18730 PF13181 Tetratricopeptide repeat CLO1100_RS18735 PF00248 Aldo/keto reductase family CLO1100_RS18750 PF01520 N-acetylmuramoyl-L-alanine amidase CLO1100_RS18755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS18755 PF00672 HAMP domain CLO1100_RS18755 PF02743 Cache domain CLO1100_RS18770 PF04607 Region found in RelA / SpoT proteins CLO1100_RS18785 PF12146 Serine aminopeptidase, S33 CLO1100_RS18795 PF16326 ABC transporter C-terminal domain CLO1100_RS18795 PF00005 ABC transporter CLO1100_RS18800 PF03167 Uracil DNA glycosylase superfamily CLO1100_RS18805 PF02632 BioY family CLO1100_RS18820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLO1100_RS18820 PF02743 Cache domain CLO1100_RS18820 PF00672 HAMP domain CLO1100_RS18850 PF08281 Sigma-70, region 4 CLO1100_RS18850 PF04542 Sigma-70 region 2 CLO1100_RS18855 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLO1100_RS18855 PF00588 SpoU rRNA Methylase family CLO1100_RS18860 PF00636 Ribonuclease III domain CLO1100_RS18865 PF03372 Endonuclease/Exonuclease/phosphatase family CLO1100_RS18875 PF01406 tRNA synthetases class I (C) catalytic domain CLO1100_RS18880 PF00132 Bacterial transferase hexapeptide (six repeats) CLO1100_RS18910 PF04204 Homoserine O-succinyltransferase CLO1100_RS18915 PF01053 Cys/Met metabolism PLP-dependent enzyme CLO1100_RS18925 PF03845 Spore germination protein CLO1100_RS18940 PF03323 Bacillus/Clostridium GerA spore germination protein CLO1100_RS18945 PF00465 Iron-containing alcohol dehydrogenase CLO1100_RS18950 PF13411 MerR HTH family regulatory protein CLO1100_RS18960 PF00072 Response regulator receiver domain CLO1100_RS18965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS18965 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS18965 PF00672 HAMP domain CLO1100_RS18965 PF14827 Double sensory domain of two-component sensor kinase CLO1100_RS18965 PF13426 PAS domain CLO1100_RS18970 PF03814 Potassium-transporting ATPase A subunit CLO1100_RS18980 PF02669 K+-transporting ATPase, c chain CLO1100_RS18985 PF02702 Osmosensitive K+ channel His kinase sensor domain CLO1100_RS19005 PF04070 Domain of unknown function (DUF378) CLO1100_RS19010 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLO1100_RS19015 PF01594 AI-2E family transporter CLO1100_RS19035 PF01569 PAP2 superfamily CLO1100_RS19045 PF01547 Bacterial extracellular solute-binding protein CLO1100_RS19050 PF00664 ABC transporter transmembrane region CLO1100_RS19050 PF00005 ABC transporter CLO1100_RS19075 PF00924 Mechanosensitive ion channel CLO1100_RS19080 PF07722 Peptidase C26 CLO1100_RS19085 PF00301 Rubredoxin CLO1100_RS19100 PF06866 Protein of unknown function (DUF1256) CLO1100_RS19110 PF00557 Metallopeptidase family M24 CLO1100_RS19115 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLO1100_RS19120 PF03458 UPF0126 domain CLO1100_RS19125 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CLO1100_RS19135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CLO1100_RS19135 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CLO1100_RS19135 PF00374 Nickel-dependent hydrogenase CLO1100_RS19140 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CLO1100_RS19145 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLO1100_RS19150 PF00146 NADH dehydrogenase CLO1100_RS19155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CLO1100_RS19155 PF00361 Proton-conducting membrane transporter CLO1100_RS19155 PF13244 Domain of unknown function (DUF4040) CLO1100_RS19160 PF01594 AI-2E family transporter CLO1100_RS19165 PF17827 PrmC N-terminal domain CLO1100_RS19165 PF05175 Methyltransferase small domain CLO1100_RS19170 PF07136 Protein of unknown function (DUF1385) CLO1100_RS19175 PF01197 Ribosomal protein L31 CLO1100_RS19180 PF07498 Rho termination factor, N-terminal domain CLO1100_RS19180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLO1100_RS19180 PF07497 Rho termination factor, RNA-binding domain CLO1100_RS19200 PF01048 Phosphorylase superfamily CLO1100_RS19205 PF00884 Sulfatase CLO1100_RS19210 PF00072 Response regulator receiver domain CLO1100_RS19210 PF13426 PAS domain CLO1100_RS19210 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS19210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS19210 PF08448 PAS fold CLO1100_RS19215 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLO1100_RS19215 PF01871 AMMECR1 CLO1100_RS19225 PF00700 Bacterial flagellin C-terminal helical region CLO1100_RS19225 PF00669 Bacterial flagellin N-terminal helical region CLO1100_RS19230 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS19230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS19235 PF01554 MatE CLO1100_RS19245 PF00005 ABC transporter CLO1100_RS19250 PF13411 MerR HTH family regulatory protein CLO1100_RS19260 PF02590 Predicted SPOUT methyltransferase CLO1100_RS19265 PF00753 Metallo-beta-lactamase superfamily CLO1100_RS19270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLO1100_RS19290 PF00512 His Kinase A (phospho-acceptor) domain CLO1100_RS19290 PF13426 PAS domain CLO1100_RS19290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLO1100_RS19290 PF00672 HAMP domain CLO1100_RS19295 PF00486 Transcriptional regulatory protein, C terminal CLO1100_RS19295 PF00072 Response regulator receiver domain CLO1100_RS19330 PF00483 Nucleotidyl transferase CLO1100_RS19330 PF00132 Bacterial transferase hexapeptide (six repeats) CLO1100_RS19335 PF00483 Nucleotidyl transferase CLO1100_RS19340 PF01177 Asp/Glu/Hydantoin racemase CLO1100_RS19355 PF00171 Aldehyde dehydrogenase family CLO1100_RS19355 PF00465 Iron-containing alcohol dehydrogenase CLO1100_RS19365 PF01171 PP-loop family CLO1100_RS19375 PF00483 Nucleotidyl transferase CLO1100_RS19380 PF12822 ECF transporter, substrate-specific component CLO1100_RS19390 PF14310 Fibronectin type III-like domain CLO1100_RS19390 PF01915 Glycosyl hydrolase family 3 C-terminal domain CLO1100_RS19390 PF00933 Glycosyl hydrolase family 3 N terminal domain CLO1100_RS19400 PF06165 Glycosyltransferase family 36 CLO1100_RS19400 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CLO1100_RS19405 PF00950 ABC 3 transport family CLO1100_RS19410 PF00005 ABC transporter CLO1100_RS19415 PF02779 Transketolase, pyrimidine binding domain CLO1100_RS19415 PF02780 Transketolase, C-terminal domain CLO1100_RS19415 PF00456 Transketolase, thiamine diphosphate binding domain CLO1100_RS19425 PF13443 Cro/C1-type HTH DNA-binding domain CLO1100_RS19445 PF01476 LysM domain CLO1100_RS19445 PF00246 Zinc carboxypeptidase CLO1100_RS19450 PF13538 UvrD-like helicase C-terminal domain CLO1100_RS19475 PF13649 Methyltransferase domain CLO1100_RS19480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLO1100_RS19480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLO1100_RS19485 PF00528 Binding-protein-dependent transport system inner membrane component CLO1100_RS19490 PF09383 NIL domain CLO1100_RS19490 PF00005 ABC transporter CLO1100_RS19495 PF03180 NLPA lipoprotein CLO1100_RS19500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLO1100_RS19505 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLO1100_RS19505 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLO1100_RS19515 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLO1100_RS19520 PF00155 Aminotransferase class I and II CLO1100_RS19525 PF00501 AMP-binding enzyme CLO1100_RS19525 PF14535 AMP-binding enzyme C-terminal domain CLO1100_RS19530 PF02056 Family 4 glycosyl hydrolase CLO1100_RS19530 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLO1100_RS19540 PF12833 Helix-turn-helix domain CLO1100_RS19540 PF02311 AraC-like ligand binding domain CLO1100_RS19545 PF01554 MatE CLO1100_RS19550 PF01261 Xylose isomerase-like TIM barrel CLO1100_RS19555 PF00480 ROK family CLO1100_RS19560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLO1100_RS19560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLO1100_RS19570 PF08502 LeuA allosteric (dimerisation) domain CLO1100_RS19570 PF00682 HMGL-like CLO1100_RS19575 PF00682 HMGL-like CLO1100_RS19575 PF08502 LeuA allosteric (dimerisation) domain CLO1100_RS19580 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CLO1100_RS19580 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CLO1100_RS19585 PF10369 Small subunit of acetolactate synthase CLO1100_RS19590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLO1100_RS19590 PF00205 Thiamine pyrophosphate enzyme, central domain CLO1100_RS19590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLO1100_RS19595 PF04616 Glycosyl hydrolases family 43 CLO1100_RS19595 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CLO1100_RS19605 PF14437 MafB19-like deaminase CLO1100_RS19610 PF16363 GDP-mannose 4,6 dehydratase CLO1100_RS19615 PF01370 NAD dependent epimerase/dehydratase family CLO1100_RS19645 PF00082 Subtilase family CLO1100_RS19645 PF05922 Peptidase inhibitor I9 CLO1100_RS19655 PF02779 Transketolase, pyrimidine binding domain CLO1100_RS19655 PF02780 Transketolase, C-terminal domain CLO1100_RS19660 PF00676 Dehydrogenase E1 component CLO1100_RS19670 PF00483 Nucleotidyl transferase CLO1100_RS19670 PF01050 Mannose-6-phosphate isomerase CLO1100_RS19680 PF00535 Glycosyl transferase family 2 CLO1100_RS19690 PF13603 Leucyl-tRNA synthetase, Domain 2 CLO1100_RS19690 PF00133 tRNA synthetases class I (I, L, M and V) CLO1100_RS19690 PF08264 Anticodon-binding domain of tRNA CLO1100_RS19690 PF09334 tRNA synthetases class I (M) CLO1100_RS19705 PF00271 Helicase conserved C-terminal domain CLO1100_RS19705 PF00176 SNF2 family N-terminal domain CLO1100_RS19705 PF04434 SWIM zinc finger CLO1100_RS19710 PF02073 Thermophilic metalloprotease (M29) CLO1100_RS19715 PF08439 Oligopeptidase F CLO1100_RS19715 PF01432 Peptidase family M3 CLO1100_RS19740 PF00331 Glycosyl hydrolase family 10 CLO1100_RS19740 PF00404 Dockerin type I domain CLO1100_RS19740 PF02018 Carbohydrate binding domain CLO1100_RS19740 PF00756 Putative esterase CLO1100_RS19745 PF00356 Bacterial regulatory proteins, lacI family CLO1100_RS19755 PF03698 Uncharacterised protein family (UPF0180) CLO1100_RS19760 PF00596 Class II Aldolase and Adducin N-terminal domain CLO1100_RS19775 PF00392 Bacterial regulatory proteins, gntR family CLO1100_RS19780 PF01894 Uncharacterised protein family UPF0047 CLO1100_RS19785 PF17746 SfsA N-terminal OB domain CLO1100_RS19785 PF03749 Sugar fermentation stimulation protein RE domain CLO1100_RS19790 PF01880 Desulfoferrodoxin CLO1100_RS19790 PF06397 Desulfoferrodoxin, N-terminal domain CLO1100_RS19795 PF01791 DeoC/LacD family aldolase CLO1100_RS19810 PF00269 Small, acid-soluble spore proteins, alpha/beta type CLO1100_RS19815 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CLO1100_RS19815 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CLO1100_RS19820 PF00890 FAD binding domain CLO1100_RS19820 PF02910 Fumarate reductase flavoprotein C-term CLO1100_RS19825 PF02445 Quinolinate synthetase A protein CLO1100_RS19830 PF07664 Ferrous iron transport protein B C terminus CLO1100_RS19830 PF04023 FeoA domain CLO1100_RS19830 PF02421 Ferrous iron transport protein B CLO1100_RS19830 PF17910 FeoB cytosolic helical domain CLO1100_RS19830 PF07670 Nucleoside recognition CLO1100_RS19845 PF02742 Iron dependent repressor, metal binding and dimerisation domain CLO1100_RS19845 PF18357 Diphteria toxin repressor SH3 domain CLO1100_RS19845 PF01325 Iron dependent repressor, N-terminal DNA binding domain CLO1100_RS19865 PF03989 DNA gyrase C-terminal domain, beta-propeller CLO1100_RS19865 PF00521 DNA gyrase/topoisomerase IV, subunit A CLO1100_RS19870 PF02195 ParB-like nuclease domain CLO1100_RS19870 PF17762 HTH domain found in ParB protein CLO1100_RS19875 PF02527 rRNA small subunit methyltransferase G CLO1100_RS19880 PF13932 GidA associated domain CLO1100_RS19880 PF01134 Glucose inhibited division protein A CLO1100_RS19885 PF12631 MnmE helical domain CLO1100_RS19885 PF10396 GTP-binding protein TrmE N-terminus CLO1100_RS19885 PF01926 50S ribosome-binding GTPase CLO1100_RS19890 PF01424 R3H domain CLO1100_RS19890 PF14804 Jag N-terminus CLO1100_RS19895 PF02096 60Kd inner membrane protein CLO1100_RS19895 PF14849 YidC periplasmic domain CLO1100_RS19900 PF00825 Ribonuclease P CLO1100_RS19905 PF00468 Ribosomal protein L34 CLO1100_RS19920 PF03793 PASTA domain CLO1100_RS19920 PF00069 Protein kinase domain CLO1100_RS19925 PF01223 DNA/RNA non-specific endonuclease CLO1100_RS19945 PF01381 Helix-turn-helix CLO1100_RS19950 PF07261 Replication initiation and membrane attachment CLO1100_RS19950 PF14297 Domain of unknown function (DUF4373) CLO1100_RS19975 PF00589 Phage integrase family CLO1100_RS19980 PF01381 Helix-turn-helix CLO1100_RS19985 PF12791 Anti-sigma factor N-terminus CLO1100_RS20000 PF00550 Phosphopantetheine attachment site CLO1100_RS20000 PF00975 Thioesterase domain CLO1100_RS20000 PF00501 AMP-binding enzyme CLO1100_RS20000 PF00668 Condensation domain CLO1100_RS20000 PF13193 AMP-binding enzyme C-terminal domain CLO1100_RS20015 PF01381 Helix-turn-helix CLO1100_RS20020 PF07883 Cupin domain CLO1100_RS20020 PF12833 Helix-turn-helix domain CLO1100_RS20025 PF00395 S-layer homology domain CLO1100_RS20045 PF00248 Aldo/keto reductase family CLO1100_RS20055 PF00082 Subtilase family CLO1100_RS20065 PF00395 S-layer homology domain CLO1100_RS20065 PF02018 Carbohydrate binding domain CLO1100_RS20065 PF00331 Glycosyl hydrolase family 10 CLO1100_RS20065 PF06452 Carbohydrate family 9 binding domain-like