locus-tag class description CTC_RS00005 PF02861 Clp amino terminal domain, pathogenicity island component CTC_RS00005 PF17871 AAA lid domain CTC_RS00005 PF07724 AAA domain (Cdc48 subfamily) CTC_RS00005 PF00004 ATPase family associated with various cellular activities (AAA) CTC_RS00005 PF10431 C-terminal, D2-small domain, of ClpB protein CTC_RS00010 PF13396 Phospholipase_D-nuclease N-terminal CTC_RS00010 PF13091 PLD-like domain CTC_RS00075 PF00293 NUDIX domain CTC_RS00075 PF09297 NADH pyrophosphatase zinc ribbon domain CTC_RS00080 PF03749 Sugar fermentation stimulation protein RE domain CTC_RS00080 PF17746 SfsA N-terminal OB domain CTC_RS00085 PF00291 Pyridoxal-phosphate dependent enzyme CTC_RS00090 PF00158 Sigma-54 interaction domain CTC_RS00090 PF02954 Bacterial regulatory protein, Fis family CTC_RS00090 PF13188 PAS domain CTC_RS00105 PF02132 RecR protein CTC_RS00105 PF13662 Toprim domain CTC_RS00110 PF02575 YbaB/EbfC DNA-binding family CTC_RS00115 PF12169 DNA polymerase III subunits gamma and tau domain III CTC_RS00145 PF14437 MafB19-like deaminase CTC_RS00155 PF17932 Tetracyclin repressor-like, C-terminal domain CTC_RS00155 PF00440 Bacterial regulatory proteins, tetR family CTC_RS00160 PF02666 Phosphatidylserine decarboxylase CTC_RS00180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTC_RS00180 PF02403 Seryl-tRNA synthetase N-terminal domain CTC_RS00190 PF01266 FAD dependent oxidoreductase CTC_RS00195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS00195 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS00195 PF00989 PAS fold CTC_RS00195 PF13188 PAS domain CTC_RS00195 PF13426 PAS domain CTC_RS00200 PF03699 Uncharacterised protein family (UPF0182) CTC_RS00205 PF02829 3H domain CTC_RS00205 PF08279 HTH domain CTC_RS00240 PF00521 DNA gyrase/topoisomerase IV, subunit A CTC_RS00240 PF03989 DNA gyrase C-terminal domain, beta-propeller CTC_RS00245 PF01751 Toprim domain CTC_RS00245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS00245 PF00986 DNA gyrase B subunit, carboxyl terminus CTC_RS00245 PF00204 DNA gyrase B CTC_RS00255 PF02463 RecF/RecN/SMC N terminal domain CTC_RS00265 PF02767 DNA polymerase III beta subunit, central domain CTC_RS00265 PF02768 DNA polymerase III beta subunit, C-terminal domain CTC_RS00265 PF00712 DNA polymerase III beta subunit, N-terminal domain CTC_RS00270 PF11638 DnaA N-terminal domain CTC_RS00270 PF08299 Bacterial dnaA protein helix-turn-helix CTC_RS00270 PF00308 Bacterial dnaA protein CTC_RS00275 PF00468 Ribosomal protein L34 CTC_RS00280 PF00825 Ribonuclease P CTC_RS00285 PF01809 Putative membrane protein insertion efficiency factor CTC_RS00290 PF02096 60Kd inner membrane protein CTC_RS00295 PF01424 R3H domain CTC_RS00295 PF14804 Jag N-terminus CTC_RS00300 PF12631 MnmE helical domain CTC_RS00300 PF10396 GTP-binding protein TrmE N-terminus CTC_RS00300 PF01926 50S ribosome-binding GTPase CTC_RS00305 PF01134 Glucose inhibited division protein A CTC_RS00305 PF13932 GidA associated domain CTC_RS00310 PF02527 rRNA small subunit methyltransferase G CTC_RS00315 PF02195 ParB-like nuclease domain CTC_RS00315 PF17762 HTH domain found in ParB protein CTC_RS00320 PF13614 AAA domain CTC_RS00325 PF17762 HTH domain found in ParB protein CTC_RS00325 PF02195 ParB-like nuclease domain CTC_RS00335 PF06866 Protein of unknown function (DUF1256) CTC_RS00340 PF01594 AI-2E family transporter CTC_RS00345 PF00924 Mechanosensitive ion channel CTC_RS00355 PF01250 Ribosomal protein S6 CTC_RS00360 PF00436 Single-strand binding protein family CTC_RS00365 PF01084 Ribosomal protein S18 CTC_RS00380 PF01368 DHH family CTC_RS00380 PF02272 DHHA1 domain CTC_RS00385 PF01281 Ribosomal protein L9, N-terminal domain CTC_RS00385 PF03948 Ribosomal protein L9, C-terminal domain CTC_RS00390 PF05362 Lon protease (S16) C-terminal proteolytic domain CTC_RS00390 PF00004 ATPase family associated with various cellular activities (AAA) CTC_RS00395 PF03796 DnaB-like helicase C terminal domain CTC_RS00395 PF00772 DnaB-like helicase N terminal domain CTC_RS00415 PF01066 CDP-alcohol phosphatidyltransferase CTC_RS00445 PF03618 Kinase/pyrophosphorylase CTC_RS00480 PF03060 Nitronate monooxygenase CTC_RS00490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CTC_RS00490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CTC_RS00495 PF00550 Phosphopantetheine attachment site CTC_RS00500 PF03060 Nitronate monooxygenase CTC_RS00505 PF00698 Acyl transferase domain CTC_RS00515 PF00109 Beta-ketoacyl synthase, N-terminal domain CTC_RS00515 PF02801 Beta-ketoacyl synthase, C-terminal domain CTC_RS00520 PF00364 Biotin-requiring enzyme CTC_RS00525 PF07977 FabA-like domain CTC_RS00530 PF00289 Biotin carboxylase, N-terminal domain CTC_RS00530 PF02785 Biotin carboxylase C-terminal domain CTC_RS00530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTC_RS00535 PF17848 Acetyl-coA carboxylase zinc finger domain CTC_RS00535 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CTC_RS00545 PF00665 Integrase core domain CTC_RS00545 PF13276 HTH-like domain CTC_RS00545 PF13333 Integrase core domain CTC_RS00550 PF00210 Ferritin-like domain CTC_RS00575 PF00152 tRNA synthetases class II (D, K and N) CTC_RS00575 PF01336 OB-fold nucleic acid binding domain CTC_RS00585 PF02683 Cytochrome C biogenesis protein transmembrane region CTC_RS00590 PF00578 AhpC/TSA family CTC_RS00595 PF01975 Survival protein SurE CTC_RS00605 PF01625 Peptide methionine sulfoxide reductase CTC_RS00610 PF05857 TraX protein CTC_RS00615 PF06968 Biotin and Thiamin Synthesis associated domain CTC_RS00615 PF04055 Radical SAM superfamily CTC_RS00620 PF01546 Peptidase family M20/M25/M40 CTC_RS00620 PF07687 Peptidase dimerisation domain CTC_RS00625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTC_RS00625 PF03466 LysR substrate binding domain CTC_RS00635 PF00849 RNA pseudouridylate synthase CTC_RS00635 PF01479 S4 domain CTC_RS00650 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CTC_RS00650 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CTC_RS00655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS00655 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS00665 PF00005 ABC transporter CTC_RS00670 PF00486 Transcriptional regulatory protein, C terminal CTC_RS00670 PF00072 Response regulator receiver domain CTC_RS00690 PF02590 Predicted SPOUT methyltransferase CTC_RS00695 PF01043 SecA preprotein cross-linking domain CTC_RS00695 PF07517 SecA DEAD-like domain CTC_RS00695 PF02810 SEC-C motif CTC_RS00695 PF07516 SecA Wing and Scaffold domain CTC_RS00710 PF00753 Metallo-beta-lactamase superfamily CTC_RS00715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CTC_RS00725 PF00120 Glutamine synthetase, catalytic domain CTC_RS00725 PF03951 Glutamine synthetase, beta-Grasp domain CTC_RS00750 PF13333 Integrase core domain CTC_RS00750 PF00665 Integrase core domain CTC_RS00750 PF13276 HTH-like domain CTC_RS00765 PF04055 Radical SAM superfamily CTC_RS00765 PF16199 Radical_SAM C-terminal domain CTC_RS00770 PF04029 2-phosphosulpholactate phosphatase CTC_RS00780 PF13419 Haloacid dehalogenase-like hydrolase CTC_RS00785 PF11953 Domain of unknown function (DUF3470) CTC_RS00785 PF12838 4Fe-4S dicluster domain CTC_RS00795 PF08245 Mur ligase middle domain CTC_RS00795 PF02875 Mur ligase family, glutamate ligase domain CTC_RS00795 PF01225 Mur ligase family, catalytic domain CTC_RS00800 PF09182 Bacterial purine repressor, N-terminal CTC_RS00800 PF00156 Phosphoribosyl transferase domain CTC_RS00805 PF04026 SpoVG CTC_RS00810 PF00132 Bacterial transferase hexapeptide (six repeats) CTC_RS00810 PF12804 MobA-like NTP transferase domain CTC_RS00815 PF14572 Phosphoribosyl synthetase-associated domain CTC_RS00815 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CTC_RS00820 PF00486 Transcriptional regulatory protein, C terminal CTC_RS00820 PF00072 Response regulator receiver domain CTC_RS00825 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS00825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS00825 PF00672 HAMP domain CTC_RS00830 PF13180 PDZ domain CTC_RS00835 PF01195 Peptidyl-tRNA hydrolase CTC_RS00840 PF03461 TRCF domain CTC_RS00840 PF00271 Helicase conserved C-terminal domain CTC_RS00840 PF00270 DEAD/DEAH box helicase CTC_RS00840 PF17757 UvrB interaction domain CTC_RS00840 PF02559 CarD-like/TRCF domain CTC_RS00850 PF15714 Stage V sporulation protein T C-terminal, transcription factor CTC_RS00850 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CTC_RS00855 PF14667 Polysaccharide biosynthesis C-terminal domain CTC_RS00855 PF01943 Polysaccharide biosynthesis protein CTC_RS00860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTC_RS00860 PF03819 MazG nucleotide pyrophosphohydrolase domain CTC_RS00865 PF00216 Bacterial DNA-binding protein CTC_RS00870 PF01479 S4 domain CTC_RS00875 PF07873 YabP family CTC_RS00890 PF00575 S1 RNA binding domain CTC_RS00920 PF07228 Stage II sporulation protein E (SpoIIE) CTC_RS00925 PF01171 PP-loop family CTC_RS00925 PF11734 TilS substrate C-terminal domain CTC_RS00930 PF00156 Phosphoribosyl transferase domain CTC_RS00935 PF17862 AAA+ lid domain CTC_RS00935 PF00004 ATPase family associated with various cellular activities (AAA) CTC_RS00935 PF01434 Peptidase family M41 CTC_RS00945 PF03309 Type III pantothenate kinase CTC_RS00950 PF01207 Dihydrouridine synthase (Dus) CTC_RS00960 PF03449 Transcription elongation factor, N-terminal CTC_RS00960 PF01272 Transcription elongation factor, GreA/GreB, C-term CTC_RS00965 PF01336 OB-fold nucleic acid binding domain CTC_RS00965 PF00152 tRNA synthetases class II (D, K and N) CTC_RS00975 PF03129 Anticodon binding domain CTC_RS00975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTC_RS00980 PF08245 Mur ligase middle domain CTC_RS01005 PF13145 PPIC-type PPIASE domain CTC_RS01010 PF02146 Sir2 family CTC_RS01035 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CTC_RS01035 PF01276 Orn/Lys/Arg decarboxylase, major domain CTC_RS01040 PF02223 Thymidylate kinase CTC_RS01045 PF06153 Cyclic-di-AMP receptor CTC_RS01055 PF04468 PSP1 C-terminal conserved region CTC_RS01065 PF12838 4Fe-4S dicluster domain CTC_RS01070 PF13276 HTH-like domain CTC_RS01070 PF00665 Integrase core domain CTC_RS01070 PF13333 Integrase core domain CTC_RS01080 PF05175 Methyltransferase small domain CTC_RS01085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTC_RS01090 PF01476 LysM domain CTC_RS01090 PF00877 NlpC/P60 family CTC_RS01090 PF08239 Bacterial SH3 domain CTC_RS01095 PF18277 AbrB C-terminal domain CTC_RS01095 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CTC_RS01100 PF00923 Transaldolase/Fructose-6-phosphate aldolase CTC_RS01105 PF01522 Polysaccharide deacetylase CTC_RS01110 PF00480 ROK family CTC_RS01115 PF05188 MutS domain II CTC_RS01115 PF05192 MutS domain III CTC_RS01115 PF05190 MutS family domain IV CTC_RS01115 PF01624 MutS domain I CTC_RS01115 PF00488 MutS domain V CTC_RS01120 PF02542 YgbB family CTC_RS01125 PF01042 Endoribonuclease L-PSP CTC_RS01130 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CTC_RS01130 PF08239 Bacterial SH3 domain CTC_RS01130 PF05036 Sporulation related domain CTC_RS01140 PF02386 Cation transport protein CTC_RS01145 PF02080 TrkA-C domain CTC_RS01145 PF02254 TrkA-N domain CTC_RS01150 PF07670 Nucleoside recognition CTC_RS01155 PF07670 Nucleoside recognition CTC_RS01160 PF00005 ABC transporter CTC_RS01170 PF03167 Uracil DNA glycosylase superfamily CTC_RS01175 PF09334 tRNA synthetases class I (M) CTC_RS01175 PF08264 Anticodon-binding domain of tRNA CTC_RS01175 PF01588 Putative tRNA binding domain CTC_RS01180 PF01026 TatD related DNase CTC_RS01185 PF03990 G5-linked-Ubiquitin-like domain CTC_RS01185 PF06725 3D domain CTC_RS01185 PF07501 G5 domain CTC_RS01190 PF13331 Domain of unknown function (DUF4093) CTC_RS01190 PF13662 Toprim domain CTC_RS01195 PF00398 Ribosomal RNA adenine dimethylase CTC_RS01210 PF01790 Prolipoprotein diacylglyceryl transferase CTC_RS01220 PF10609 NUBPL iron-transfer P-loop NTPase CTC_RS01240 PF13597 Anaerobic ribonucleoside-triphosphate reductase CTC_RS01240 PF03477 ATP cone domain CTC_RS01250 PF01022 Bacterial regulatory protein, arsR family CTC_RS01255 PF01177 Asp/Glu/Hydantoin racemase CTC_RS01265 PF01520 N-acetylmuramoyl-L-alanine amidase CTC_RS01270 PF08264 Anticodon-binding domain of tRNA CTC_RS01270 PF00133 tRNA synthetases class I (I, L, M and V) CTC_RS01275 PF00356 Bacterial regulatory proteins, lacI family CTC_RS01280 PF13087 AAA domain CTC_RS01280 PF13195 Protein of unknown function (DUF4011) CTC_RS01280 PF13086 AAA domain CTC_RS01285 PF01050 Mannose-6-phosphate isomerase CTC_RS01285 PF00483 Nucleotidyl transferase CTC_RS01300 PF00534 Glycosyl transferases group 1 CTC_RS01300 PF13439 Glycosyltransferase Family 4 CTC_RS01320 PF13439 Glycosyltransferase Family 4 CTC_RS01320 PF00534 Glycosyl transferases group 1 CTC_RS01335 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS01340 PF08402 TOBE domain CTC_RS01340 PF00005 ABC transporter CTC_RS01350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CTC_RS01365 PF18277 AbrB C-terminal domain CTC_RS01365 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CTC_RS01370 PF00923 Transaldolase/Fructose-6-phosphate aldolase CTC_RS01375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CTC_RS01375 PF02378 Phosphotransferase system, EIIC CTC_RS01375 PF00367 phosphotransferase system, EIIB CTC_RS01380 PF05582 YabG peptidase U57 CTC_RS01385 PF06257 Biofilm formation stimulator VEG CTC_RS01390 PF01476 LysM domain CTC_RS01395 PF03575 Peptidase family S51 CTC_RS01400 PF08443 RimK-like ATP-grasp domain CTC_RS01400 PF02875 Mur ligase family, glutamate ligase domain CTC_RS01400 PF08245 Mur ligase middle domain CTC_RS01405 PF08544 GHMP kinases C terminal CTC_RS01405 PF00288 GHMP kinases N terminal domain CTC_RS01415 PF03323 Bacillus/Clostridium GerA spore germination protein CTC_RS01430 PF09551 Stage II sporulation protein R (spore_II_R) CTC_RS01435 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CTC_RS01435 PF04101 Glycosyltransferase family 28 C-terminal domain CTC_RS01440 PF14620 YpeB sporulation CTC_RS01440 PF03413 Peptidase propeptide and YPEB domain CTC_RS01445 PF01820 D-ala D-ala ligase N-terminus CTC_RS01445 PF07478 D-ala D-ala ligase C-terminus CTC_RS01470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTC_RS01470 PF07497 Rho termination factor, RNA-binding domain CTC_RS01470 PF07498 Rho termination factor, N-terminal domain CTC_RS01475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS01475 PF00672 HAMP domain CTC_RS01475 PF02743 Cache domain CTC_RS01480 PF01197 Ribosomal protein L31 CTC_RS01485 PF00265 Thymidine kinase CTC_RS01490 PF07136 Protein of unknown function (DUF1385) CTC_RS01495 PF17827 PrmC N-terminal domain CTC_RS01495 PF05175 Methyltransferase small domain CTC_RS01500 PF00472 RF-1 domain CTC_RS01500 PF03462 PCRF domain CTC_RS01515 PF03481 Putative GTP-binding controlling metal-binding CTC_RS01515 PF01300 Telomere recombination CTC_RS01520 PF01451 Low molecular weight phosphotyrosine protein phosphatase CTC_RS01525 PF02502 Ribose/Galactose Isomerase CTC_RS01540 PF00953 Glycosyl transferase family 4 CTC_RS01545 PF02350 UDP-N-acetylglucosamine 2-epimerase CTC_RS01550 PF02803 Thiolase, C-terminal domain CTC_RS01550 PF00108 Thiolase, N-terminal domain CTC_RS01560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CTC_RS01565 PF08486 Stage II sporulation protein CTC_RS01570 PF10145 Phage-related minor tail protein CTC_RS01570 PF01464 Transglycosylase SLT domain CTC_RS01570 PF01551 Peptidase family M23 CTC_RS01575 PF12116 Stage III sporulation protein D CTC_RS01585 PF06866 Protein of unknown function (DUF1256) CTC_RS01590 PF01171 PP-loop family CTC_RS01615 PF02773 S-adenosylmethionine synthetase, C-terminal domain CTC_RS01615 PF02772 S-adenosylmethionine synthetase, central domain CTC_RS01615 PF00438 S-adenosylmethionine synthetase, N-terminal domain CTC_RS01620 PF13538 UvrD-like helicase C-terminal domain CTC_RS01620 PF14490 Helix-hairpin-helix containing domain CTC_RS01620 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CTC_RS01635 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CTC_RS01635 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CTC_RS01645 PF07516 SecA Wing and Scaffold domain CTC_RS01645 PF07517 SecA DEAD-like domain CTC_RS01645 PF01043 SecA preprotein cross-linking domain CTC_RS01645 PF02810 SEC-C motif CTC_RS01650 PF03462 PCRF domain CTC_RS01650 PF00472 RF-1 domain CTC_RS01660 PF16921 Tex protein YqgF-like domain CTC_RS01660 PF17674 HHH domain CTC_RS01660 PF00575 S1 RNA binding domain CTC_RS01660 PF09371 Tex-like protein N-terminal domain CTC_RS01665 PF12822 ECF transporter, substrate-specific component CTC_RS01675 PF01312 FlhB HrpN YscU SpaS Family CTC_RS01690 PF04607 Region found in RelA / SpoT proteins CTC_RS01695 PF13603 Leucyl-tRNA synthetase, Domain 2 CTC_RS01695 PF08264 Anticodon-binding domain of tRNA CTC_RS01695 PF09334 tRNA synthetases class I (M) CTC_RS01695 PF00133 tRNA synthetases class I (I, L, M and V) CTC_RS01720 PF01238 Phosphomannose isomerase type I CTC_RS01730 PF01116 Fructose-bisphosphate aldolase class-II CTC_RS01740 PF04239 Protein of unknown function (DUF421) CTC_RS01745 PF00485 Phosphoribulokinase / Uridine kinase family CTC_RS01755 PF01066 CDP-alcohol phosphatidyltransferase CTC_RS01760 PF00571 CBS domain CTC_RS01765 PF00781 Diacylglycerol kinase catalytic domain CTC_RS01770 PF07486 Cell Wall Hydrolase CTC_RS01770 PF01471 Putative peptidoglycan binding domain CTC_RS01775 PF00132 Bacterial transferase hexapeptide (six repeats) CTC_RS01780 PF08331 Domain of unknown function (DUF1730) CTC_RS01790 PF10576 Iron-sulfur binding domain of endonuclease III CTC_RS01790 PF00633 Helix-hairpin-helix motif CTC_RS01790 PF00730 HhH-GPD superfamily base excision DNA repair protein CTC_RS01795 PF00390 Malic enzyme, N-terminal domain CTC_RS01795 PF03949 Malic enzyme, NAD binding domain CTC_RS01800 PF02464 Competence-damaged protein CTC_RS01800 PF00994 Probable molybdopterin binding domain CTC_RS01800 PF18146 Damage-inducible protein CinA KH domain CTC_RS01805 PF04011 LemA family CTC_RS01815 PF04294 VanW like protein CTC_RS01820 PF07726 ATPase family associated with various cellular activities (AAA) CTC_RS01820 PF17863 AAA lid domain CTC_RS01845 PF01520 N-acetylmuramoyl-L-alanine amidase CTC_RS01845 PF08239 Bacterial SH3 domain CTC_RS01855 PF00588 SpoU rRNA Methylase family CTC_RS01860 PF02645 Uncharacterised protein, DegV family COG1307 CTC_RS01865 PF02608 ABC transporter substrate-binding protein PnrA-like CTC_RS01870 PF00005 ABC transporter CTC_RS01875 PF02653 Branched-chain amino acid transport system / permease component CTC_RS01880 PF02653 Branched-chain amino acid transport system / permease component CTC_RS01885 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS01890 PF00571 CBS domain CTC_RS01890 PF00005 ABC transporter CTC_RS01900 PF00309 Sigma-54 factor, Activator interacting domain (AID) CTC_RS01900 PF04963 Sigma-54 factor, core binding domain CTC_RS01900 PF04552 Sigma-54, DNA binding domain CTC_RS01905 PF04198 Putative sugar-binding domain CTC_RS01910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CTC_RS01910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTC_RS01915 PF00162 Phosphoglycerate kinase CTC_RS01920 PF00121 Triosephosphate isomerase CTC_RS01925 PF01676 Metalloenzyme superfamily CTC_RS01925 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CTC_RS01930 PF03952 Enolase, N-terminal domain CTC_RS01930 PF00113 Enolase, C-terminal TIM barrel domain CTC_RS01940 PF03030 Inorganic H+ pyrophosphatase CTC_RS01945 PF00575 S1 RNA binding domain CTC_RS01945 PF08206 Ribonuclease B OB domain CTC_RS01945 PF00773 RNB domain CTC_RS01945 PF17876 Cold shock domain CTC_RS01955 PF01668 SmpB protein CTC_RS01960 PF02086 D12 class N6 adenine-specific DNA methyltransferase CTC_RS01985 PF00486 Transcriptional regulatory protein, C terminal CTC_RS01985 PF00072 Response regulator receiver domain CTC_RS01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS01995 PF00005 ABC transporter CTC_RS02000 PF02687 FtsX-like permease family CTC_RS02005 PF04143 Sulphur transport CTC_RS02015 PF04143 Sulphur transport CTC_RS02020 PF03466 LysR substrate binding domain CTC_RS02020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTC_RS02025 PF04143 Sulphur transport CTC_RS02030 PF08903 Domain of unknown function (DUF1846) CTC_RS02035 PF01751 Toprim domain CTC_RS02035 PF01131 DNA topoisomerase CTC_RS02045 PF00313 'Cold-shock' DNA-binding domain CTC_RS02050 PF00005 ABC transporter CTC_RS02055 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS02065 PF00465 Iron-containing alcohol dehydrogenase CTC_RS02070 PF01177 Asp/Glu/Hydantoin racemase CTC_RS02075 PF03063 Prismane/CO dehydrogenase family CTC_RS02080 PF00072 Response regulator receiver domain CTC_RS02080 PF00486 Transcriptional regulatory protein, C terminal CTC_RS02085 PF00672 HAMP domain CTC_RS02085 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS02095 PF08000 Bacterial PH domain CTC_RS02100 PF04239 Protein of unknown function (DUF421) CTC_RS02110 PF01266 FAD dependent oxidoreductase CTC_RS02110 PF00355 Rieske [2Fe-2S] domain CTC_RS02120 PF01554 MatE CTC_RS02125 PF01170 Putative RNA methylase family UPF0020 CTC_RS02125 PF02926 THUMP domain CTC_RS02140 PF07687 Peptidase dimerisation domain CTC_RS02140 PF01546 Peptidase family M20/M25/M40 CTC_RS02150 PF00664 ABC transporter transmembrane region CTC_RS02150 PF00005 ABC transporter CTC_RS02155 PF00664 ABC transporter transmembrane region CTC_RS02155 PF00005 ABC transporter CTC_RS02160 PF03009 Glycerophosphoryl diester phosphodiesterase family CTC_RS02175 PF01741 Large-conductance mechanosensitive channel, MscL CTC_RS02180 PF00258 Flavodoxin CTC_RS02190 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CTC_RS02200 PF00860 Permease family CTC_RS02225 PF11799 impB/mucB/samB family C-terminal domain CTC_RS02225 PF00817 impB/mucB/samB family CTC_RS02225 PF11798 IMS family HHH motif CTC_RS02230 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CTC_RS02230 PF10135 Rod binding protein CTC_RS02265 PF01554 MatE CTC_RS02290 PF01869 BadF/BadG/BcrA/BcrD ATPase family CTC_RS02295 PF13333 Integrase core domain CTC_RS02295 PF00665 Integrase core domain CTC_RS02295 PF13276 HTH-like domain CTC_RS02305 PF07670 Nucleoside recognition CTC_RS02305 PF02421 Ferrous iron transport protein B CTC_RS02305 PF17910 FeoB cytosolic helical domain CTC_RS02305 PF07664 Ferrous iron transport protein B C terminus CTC_RS02325 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTC_RS02325 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTC_RS02325 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTC_RS02325 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTC_RS02330 PF06962 Putative rRNA methylase CTC_RS02335 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS02335 PF00672 HAMP domain CTC_RS02335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS02335 PF00989 PAS fold CTC_RS02335 PF18698 Histidine kinase sensor domain CTC_RS02345 PF02810 SEC-C motif CTC_RS02345 PF07516 SecA Wing and Scaffold domain CTC_RS02345 PF01043 SecA preprotein cross-linking domain CTC_RS02345 PF07517 SecA DEAD-like domain CTC_RS02390 PF17961 Bacterial Ig domain CTC_RS02390 PF00746 LPXTG cell wall anchor motif CTC_RS02390 PF17210 SdrD B-like domain CTC_RS02390 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CTC_RS02390 PF04650 YSIRK type signal peptide CTC_RS02405 PF12729 Four helix bundle sensory module for signal transduction CTC_RS02405 PF00672 HAMP domain CTC_RS02405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS02415 PF02770 Acyl-CoA dehydrogenase, middle domain CTC_RS02415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTC_RS02415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTC_RS02420 PF01144 Coenzyme A transferase CTC_RS02425 PF00378 Enoyl-CoA hydratase/isomerase CTC_RS02430 PF01638 HxlR-like helix-turn-helix CTC_RS02435 PF00924 Mechanosensitive ion channel CTC_RS02435 PF05552 Conserved TM helix CTC_RS02440 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CTC_RS02440 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CTC_RS02455 PF00005 ABC transporter CTC_RS02460 PF02687 FtsX-like permease family CTC_RS02460 PF12704 MacB-like periplasmic core domain CTC_RS02460 PF00005 ABC transporter CTC_RS02510 PF01018 GTP1/OBG CTC_RS02510 PF04055 Radical SAM superfamily CTC_RS02510 PF01926 50S ribosome-binding GTPase CTC_RS02530 PF08220 DeoR-like helix-turn-helix domain CTC_RS02530 PF00455 DeoR C terminal sensor domain CTC_RS02535 PF00465 Iron-containing alcohol dehydrogenase CTC_RS02540 PF01116 Fructose-bisphosphate aldolase class-II CTC_RS02545 PF00294 pfkB family carbohydrate kinase CTC_RS02550 PF04962 KduI/IolB family CTC_RS02555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTC_RS02555 PF00205 Thiamine pyrophosphate enzyme, central domain CTC_RS02555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTC_RS02560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTC_RS02560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CTC_RS02565 PF01261 Xylose isomerase-like TIM barrel CTC_RS02570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CTC_RS02570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTC_RS02575 PF00474 Sodium:solute symporter family CTC_RS02585 PF13333 Integrase core domain CTC_RS02585 PF13276 HTH-like domain CTC_RS02585 PF00665 Integrase core domain CTC_RS02610 PF01520 N-acetylmuramoyl-L-alanine amidase CTC_RS02610 PF04122 Putative cell wall binding repeat 2 CTC_RS02625 PF02659 Putative manganese efflux pump CTC_RS02630 PF01475 Ferric uptake regulator family CTC_RS02645 PF01966 HD domain CTC_RS02645 PF11871 Domain of unknown function (DUF3391) CTC_RS02650 PF01694 Rhomboid family CTC_RS02655 PF17862 AAA+ lid domain CTC_RS02655 PF00004 ATPase family associated with various cellular activities (AAA) CTC_RS02655 PF01434 Peptidase family M41 CTC_RS02675 PF00004 ATPase family associated with various cellular activities (AAA) CTC_RS02675 PF10431 C-terminal, D2-small domain, of ClpB protein CTC_RS02675 PF02861 Clp amino terminal domain, pathogenicity island component CTC_RS02675 PF17871 AAA lid domain CTC_RS02675 PF07724 AAA domain (Cdc48 subfamily) CTC_RS02680 PF01522 Polysaccharide deacetylase CTC_RS02685 PF00884 Sulfatase CTC_RS02690 PF07685 CobB/CobQ-like glutamine amidotransferase domain CTC_RS02695 PF08353 Domain of unknown function (DUF1727) CTC_RS02695 PF08245 Mur ligase middle domain CTC_RS02700 PF09587 Bacterial capsule synthesis protein PGA_cap CTC_RS02715 PF02673 Bacitracin resistance protein BacA CTC_RS02765 PF03772 Competence protein CTC_RS02765 PF00753 Metallo-beta-lactamase superfamily CTC_RS02765 PF13567 Domain of unknown function (DUF4131) CTC_RS02770 PF01553 Acyltransferase CTC_RS02785 PF04542 Sigma-70 region 2 CTC_RS02785 PF08281 Sigma-70, region 4 CTC_RS02795 PF02954 Bacterial regulatory protein, Fis family CTC_RS02795 PF13188 PAS domain CTC_RS02795 PF00158 Sigma-54 interaction domain CTC_RS02800 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTC_RS02805 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTC_RS02810 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS02815 PF00005 ABC transporter CTC_RS02820 PF00764 Arginosuccinate synthase CTC_RS02825 PF00206 Lyase CTC_RS02825 PF14698 Argininosuccinate lyase C-terminal CTC_RS02830 PF01235 Sodium:alanine symporter family CTC_RS02835 PF04960 Glutaminase CTC_RS02840 PF03553 Na+/H+ antiporter family CTC_RS02845 PF01037 Lrp/AsnC ligand binding domain CTC_RS02845 PF13404 AsnC-type helix-turn-helix domain CTC_RS02855 PF00291 Pyridoxal-phosphate dependent enzyme CTC_RS02870 PF01965 DJ-1/PfpI family CTC_RS02880 PF08471 Class II vitamin B12-dependent ribonucleotide reductase CTC_RS02880 PF02867 Ribonucleotide reductase, barrel domain CTC_RS02885 PF02082 Transcriptional regulator CTC_RS02895 PF01156 Inosine-uridine preferring nucleoside hydrolase CTC_RS02900 PF12320 Type 5 capsule protein repressor C-terminal domain CTC_RS02900 PF00149 Calcineurin-like phosphoesterase CTC_RS02905 PF13476 AAA domain CTC_RS02910 PF12848 ABC transporter CTC_RS02910 PF00005 ABC transporter CTC_RS02915 PF01979 Amidohydrolase family CTC_RS02920 PF01979 Amidohydrolase family CTC_RS02925 PF03806 AbgT putative transporter family CTC_RS02935 PF03006 Haemolysin-III related CTC_RS02945 PF00005 ABC transporter CTC_RS02945 PF12848 ABC transporter CTC_RS02955 PF00080 Copper/zinc superoxide dismutase (SODC) CTC_RS02965 PF03062 MBOAT, membrane-bound O-acyltransferase family CTC_RS02980 PF01476 LysM domain CTC_RS02980 PF00246 Zinc carboxypeptidase CTC_RS02985 PF00465 Iron-containing alcohol dehydrogenase CTC_RS02990 PF00486 Transcriptional regulatory protein, C terminal CTC_RS02990 PF00072 Response regulator receiver domain CTC_RS02995 PF00672 HAMP domain CTC_RS02995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS02995 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS03005 PF03551 Transcriptional regulator PadR-like family CTC_RS03010 PF11208 Protein of unknown function (DUF2992) CTC_RS03015 PF01554 MatE CTC_RS03020 PF06874 Firmicute fructose-1,6-bisphosphatase CTC_RS03025 PF03061 Thioesterase superfamily CTC_RS03040 PF04542 Sigma-70 region 2 CTC_RS03040 PF08281 Sigma-70, region 4 CTC_RS03050 PF04397 LytTr DNA-binding domain CTC_RS03050 PF00072 Response regulator receiver domain CTC_RS03065 PF00089 Trypsin CTC_RS03085 PF08281 Sigma-70, region 4 CTC_RS03085 PF04542 Sigma-70 region 2 CTC_RS03110 PF00005 ABC transporter CTC_RS03125 PF00486 Transcriptional regulatory protein, C terminal CTC_RS03125 PF00072 Response regulator receiver domain CTC_RS03130 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS03130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS03135 PF12833 Helix-turn-helix domain CTC_RS03140 PF00805 Pentapeptide repeats (8 copies) CTC_RS03150 PF00005 ABC transporter CTC_RS03185 PF06445 GyrI-like small molecule binding domain CTC_RS03185 PF12833 Helix-turn-helix domain CTC_RS03190 PF04073 Aminoacyl-tRNA editing domain CTC_RS03225 PF00005 ABC transporter CTC_RS03225 PF13732 Domain of unknown function (DUF4162) CTC_RS03245 PF17783 CvfB-like winged helix domain CTC_RS03245 PF13509 S1 domain CTC_RS03255 PF01966 HD domain CTC_RS03260 PF03734 L,D-transpeptidase catalytic domain CTC_RS03260 PF01476 LysM domain CTC_RS03280 PF00245 Alkaline phosphatase CTC_RS03285 PF02417 Chromate transporter CTC_RS03290 PF02417 Chromate transporter CTC_RS03295 PF00690 Cation transporter/ATPase, N-terminus CTC_RS03295 PF00689 Cation transporting ATPase, C-terminus CTC_RS03315 PF03885 Protein of unknown function (DUF327) CTC_RS03335 PF01872 RibD C-terminal domain CTC_RS03335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CTC_RS03340 PF00677 Lumazine binding domain CTC_RS03345 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CTC_RS03345 PF00925 GTP cyclohydrolase II CTC_RS03350 PF00885 6,7-dimethyl-8-ribityllumazine synthase CTC_RS03365 PF12627 Probable RNA and SrmB- binding site of polymerase A CTC_RS03365 PF01743 Poly A polymerase head domain CTC_RS03365 PF01966 HD domain CTC_RS03370 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CTC_RS03375 PF00795 Carbon-nitrogen hydrolase CTC_RS03375 PF02540 NAD synthase CTC_RS03385 PF01145 SPFH domain / Band 7 family CTC_RS03400 PF01820 D-ala D-ala ligase N-terminus CTC_RS03400 PF07478 D-ala D-ala ligase C-terminus CTC_RS03405 PF00392 Bacterial regulatory proteins, gntR family CTC_RS03405 PF00155 Aminotransferase class I and II CTC_RS03415 PF12705 PD-(D/E)XK nuclease superfamily CTC_RS03425 PF04542 Sigma-70 region 2 CTC_RS03425 PF08281 Sigma-70, region 4 CTC_RS03455 PF13361 UvrD-like helicase C-terminal domain CTC_RS03455 PF00580 UvrD/REP helicase N-terminal domain CTC_RS03465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTC_RS03465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTC_RS03465 PF01842 ACT domain CTC_RS03470 PF00266 Aminotransferase class-V CTC_RS03485 PF01784 NIF3 (NGG1p interacting factor 3) CTC_RS03490 PF00857 Isochorismatase family CTC_RS03495 PF02447 GntP family permease CTC_RS03500 PF02595 Glycerate kinase family CTC_RS03505 PF02743 Cache domain CTC_RS03505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS03505 PF00672 HAMP domain CTC_RS03515 PF00990 Diguanylate cyclase, GGDEF domain CTC_RS03520 PF01575 MaoC like domain CTC_RS03525 PF00158 Sigma-54 interaction domain CTC_RS03525 PF02954 Bacterial regulatory protein, Fis family CTC_RS03525 PF00989 PAS fold CTC_RS03530 PF01144 Coenzyme A transferase CTC_RS03540 PF02770 Acyl-CoA dehydrogenase, middle domain CTC_RS03540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTC_RS03540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTC_RS03545 PF01012 Electron transfer flavoprotein domain CTC_RS03550 PF00766 Electron transfer flavoprotein FAD-binding domain CTC_RS03550 PF01012 Electron transfer flavoprotein domain CTC_RS03555 PF13361 UvrD-like helicase C-terminal domain CTC_RS03555 PF00580 UvrD/REP helicase N-terminal domain CTC_RS03555 PF12705 PD-(D/E)XK nuclease superfamily CTC_RS03560 PF16736 Single Cache-like CTC_RS03560 PF00989 PAS fold CTC_RS03560 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS03560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS03565 PF00672 HAMP domain CTC_RS03565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS03565 PF18698 Histidine kinase sensor domain CTC_RS03565 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS03565 PF00989 PAS fold CTC_RS03570 PF00300 Histidine phosphatase superfamily (branch 1) CTC_RS03575 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CTC_RS03580 PF02654 Cobalamin-5-phosphate synthase CTC_RS03585 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CTC_RS03585 PF07685 CobB/CobQ-like glutamine amidotransferase domain CTC_RS03590 PF03186 CobD/Cbib protein CTC_RS03595 PF00155 Aminotransferase class I and II CTC_RS03600 PF01891 Cobalt uptake substrate-specific transmembrane region CTC_RS03605 PF02553 Cobalt transport protein component CbiN CTC_RS03615 PF01488 Shikimate / quinate 5-dehydrogenase CTC_RS03615 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CTC_RS03615 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CTC_RS03625 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CTC_RS03625 PF03900 Porphobilinogen deaminase, C-terminal domain CTC_RS03630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTC_RS03635 PF00490 Delta-aminolevulinic acid dehydratase CTC_RS03640 PF00202 Aminotransferase class-III CTC_RS03645 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CTC_RS03645 PF07685 CobB/CobQ-like glutamine amidotransferase domain CTC_RS03650 PF02570 Precorrin-8X methylmutase CTC_RS03655 PF01888 CbiD CTC_RS03660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTC_RS03665 PF05175 Methyltransferase small domain CTC_RS03670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTC_RS03675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTC_RS03680 PF11760 Cobalamin synthesis G N-terminal CTC_RS03680 PF11761 Cobalamin biosynthesis central region CTC_RS03680 PF01890 Cobalamin synthesis G C-terminus CTC_RS03685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTC_RS03690 PF02571 Precorrin-6x reductase CbiJ/CobK CTC_RS03705 PF06180 Cobalt chelatase (CbiK) CTC_RS03710 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CTC_RS03720 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CTC_RS03735 PF02368 Bacterial Ig-like domain (group 2) CTC_RS03740 PF02368 Bacterial Ig-like domain (group 2) CTC_RS03750 PF00005 ABC transporter CTC_RS03755 PF00005 ABC transporter CTC_RS03770 PF00005 ABC transporter CTC_RS03805 PF07726 ATPase family associated with various cellular activities (AAA) CTC_RS03805 PF17863 AAA lid domain CTC_RS03825 PF13243 Squalene-hopene cyclase C-terminal domain CTC_RS03825 PF13249 Squalene-hopene cyclase N-terminal domain CTC_RS03835 PF00722 Glycosyl hydrolases family 16 CTC_RS03835 PF02368 Bacterial Ig-like domain (group 2) CTC_RS03880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTC_RS03880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTC_RS03880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTC_RS03880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTC_RS03885 PF01734 Patatin-like phospholipase CTC_RS03890 PF03590 Aspartate-ammonia ligase CTC_RS03900 PF00005 ABC transporter CTC_RS03905 PF01032 FecCD transport family CTC_RS03910 PF01497 Periplasmic binding protein CTC_RS03915 PF00288 GHMP kinases N terminal domain CTC_RS03920 PF05525 Branched-chain amino acid transport protein CTC_RS03925 PF13333 Integrase core domain CTC_RS03925 PF00665 Integrase core domain CTC_RS03925 PF13276 HTH-like domain CTC_RS03935 PF00753 Metallo-beta-lactamase superfamily CTC_RS03940 PF12708 Pectate lyase superfamily protein CTC_RS03940 PF09992 Phosphodiester glycosidase CTC_RS03950 PF02163 Peptidase family M50 CTC_RS03955 PF02390 Putative methyltransferase CTC_RS03970 PF08534 Redoxin CTC_RS04000 PF00005 ABC transporter CTC_RS04005 PF00155 Aminotransferase class I and II CTC_RS04005 PF00392 Bacterial regulatory proteins, gntR family CTC_RS04010 PF00072 Response regulator receiver domain CTC_RS04010 PF00486 Transcriptional regulatory protein, C terminal CTC_RS04015 PF13426 PAS domain CTC_RS04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS04015 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS04015 PF00672 HAMP domain CTC_RS04020 PF00892 EamA-like transporter family CTC_RS04030 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CTC_RS04030 PF18277 AbrB C-terminal domain CTC_RS04035 PF00675 Insulinase (Peptidase family M16) CTC_RS04035 PF05193 Peptidase M16 inactive domain CTC_RS04035 PF08367 Peptidase M16C associated CTC_RS04040 PF00890 FAD binding domain CTC_RS04040 PF04205 FMN-binding domain CTC_RS04040 PF03358 NADPH-dependent FMN reductase CTC_RS04045 PF12146 Serine aminopeptidase, S33 CTC_RS04060 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTC_RS04060 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CTC_RS04065 PF01180 Dihydroorotate dehydrogenase CTC_RS04075 PF01212 Beta-eliminating lyase CTC_RS04080 PF00209 Sodium:neurotransmitter symporter family CTC_RS04085 PF00392 Bacterial regulatory proteins, gntR family CTC_RS04085 PF07729 FCD domain CTC_RS04090 PF00753 Metallo-beta-lactamase superfamily CTC_RS04090 PF13567 Domain of unknown function (DUF4131) CTC_RS04090 PF03772 Competence protein CTC_RS04095 PF00375 Sodium:dicarboxylate symporter family CTC_RS04100 PF01177 Asp/Glu/Hydantoin racemase CTC_RS04105 PF00206 Lyase CTC_RS04105 PF10415 Fumarase C C-terminus CTC_RS04110 PF00155 Aminotransferase class I and II CTC_RS04115 PF02915 Rubrerythrin CTC_RS04125 PF01964 Radical SAM ThiC family CTC_RS04135 PF13333 Integrase core domain CTC_RS04135 PF00665 Integrase core domain CTC_RS04135 PF13276 HTH-like domain CTC_RS04150 PF17099 Tryptophan transporter TrpP CTC_RS04170 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CTC_RS04195 PF07670 Nucleoside recognition CTC_RS04200 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTC_RS04205 PF00462 Glutaredoxin CTC_RS04210 PF02308 MgtC family CTC_RS04215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTC_RS04215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTC_RS04220 PF04055 Radical SAM superfamily CTC_RS04220 PF06969 HemN C-terminal domain CTC_RS04225 PF04055 Radical SAM superfamily CTC_RS04225 PF13186 Iron-sulfur cluster-binding domain CTC_RS04230 PF04346 Ethanolamine utilisation protein, EutH CTC_RS04235 PF00486 Transcriptional regulatory protein, C terminal CTC_RS04235 PF00072 Response regulator receiver domain CTC_RS04240 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS04240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS04240 PF00672 HAMP domain CTC_RS04245 PF00595 PDZ domain CTC_RS04245 PF13180 PDZ domain CTC_RS04255 PF02237 Biotin protein ligase C terminal domain CTC_RS04255 PF03099 Biotin/lipoate A/B protein ligase family CTC_RS04255 PF08279 HTH domain CTC_RS04285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS04285 PF00672 HAMP domain CTC_RS04285 PF12729 Four helix bundle sensory module for signal transduction CTC_RS04290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CTC_RS04290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CTC_RS04295 PF13407 Periplasmic binding protein domain CTC_RS04300 PF00005 ABC transporter CTC_RS04305 PF02653 Branched-chain amino acid transport system / permease component CTC_RS04310 PF00356 Bacterial regulatory proteins, lacI family CTC_RS04315 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CTC_RS04315 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CTC_RS04320 PF00288 GHMP kinases N terminal domain CTC_RS04320 PF08544 GHMP kinases C terminal CTC_RS04320 PF10509 Galactokinase galactose-binding signature CTC_RS04325 PF16363 GDP-mannose 4,6 dehydratase CTC_RS04330 PF04539 Sigma-70 region 3 CTC_RS04330 PF04542 Sigma-70 region 2 CTC_RS04330 PF00140 Sigma-70 factor, region 1.2 CTC_RS04330 PF03979 Sigma-70 factor, region 1.1 CTC_RS04330 PF04545 Sigma-70, region 4 CTC_RS04335 PF00899 ThiF family CTC_RS04340 PF01636 Phosphotransferase enzyme family CTC_RS04345 PF05067 Manganese containing catalase CTC_RS04365 PF00072 Response regulator receiver domain CTC_RS04365 PF00486 Transcriptional regulatory protein, C terminal CTC_RS04370 PF00989 PAS fold CTC_RS04370 PF00672 HAMP domain CTC_RS04370 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS04370 PF18698 Histidine kinase sensor domain CTC_RS04375 PF02583 Metal-sensitive transcriptional repressor CTC_RS04380 PF00403 Heavy-metal-associated domain CTC_RS04390 PF02690 Na+/Pi-cotransporter CTC_RS04400 PF01386 Ribosomal L25p family CTC_RS04400 PF14693 Ribosomal protein TL5, C-terminal domain CTC_RS04420 PF13180 PDZ domain CTC_RS04420 PF01471 Putative peptidoglycan binding domain CTC_RS04420 PF03572 Peptidase family S41 CTC_RS04435 PF02645 Uncharacterised protein, DegV family COG1307 CTC_RS04445 PF00742 Homoserine dehydrogenase CTC_RS04445 PF03447 Homoserine dehydrogenase, NAD binding domain CTC_RS04450 PF02743 Cache domain CTC_RS04450 PF00672 HAMP domain CTC_RS04450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS04455 PF04055 Radical SAM superfamily CTC_RS04455 PF12544 Lysine-2,3-aminomutase CTC_RS04475 PF00578 AhpC/TSA family CTC_RS04475 PF10417 C-terminal domain of 1-Cys peroxiredoxin CTC_RS04510 PF04055 Radical SAM superfamily CTC_RS04515 PF03553 Na+/H+ antiporter family CTC_RS04520 PF12706 Beta-lactamase superfamily domain CTC_RS04535 PF00356 Bacterial regulatory proteins, lacI family CTC_RS04540 PF00005 ABC transporter CTC_RS04545 PF02653 Branched-chain amino acid transport system / permease component CTC_RS04550 PF13407 Periplasmic binding protein domain CTC_RS04555 PF01380 SIS domain CTC_RS04555 PF00571 CBS domain CTC_RS04560 PF00294 pfkB family carbohydrate kinase CTC_RS04570 PF03928 Haem-degrading CTC_RS04580 PF12833 Helix-turn-helix domain CTC_RS04580 PF02311 AraC-like ligand binding domain CTC_RS04585 PF00005 ABC transporter CTC_RS04585 PF08021 Siderophore-interacting FAD-binding domain CTC_RS04585 PF00664 ABC transporter transmembrane region CTC_RS04585 PF04954 Siderophore-interacting protein CTC_RS04590 PF00664 ABC transporter transmembrane region CTC_RS04590 PF00005 ABC transporter CTC_RS04595 PF12464 Maltose acetyltransferase CTC_RS04595 PF14602 Hexapeptide repeat of succinyl-transferase CTC_RS04620 PF00005 ABC transporter CTC_RS04620 PF02687 FtsX-like permease family CTC_RS04620 PF12704 MacB-like periplasmic core domain CTC_RS04635 PF01381 Helix-turn-helix CTC_RS04640 PF01226 Formate/nitrite transporter CTC_RS04645 PF00672 HAMP domain CTC_RS04645 PF02743 Cache domain CTC_RS04645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS04650 PF13556 PucR C-terminal helix-turn-helix domain CTC_RS04650 PF17853 GGDEF-like domain CTC_RS04650 PF07905 Purine catabolism regulatory protein-like family CTC_RS04655 PF07687 Peptidase dimerisation domain CTC_RS04655 PF01546 Peptidase family M20/M25/M40 CTC_RS04660 PF01979 Amidohydrolase family CTC_RS04670 PF00474 Sodium:solute symporter family CTC_RS04675 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CTC_RS04680 PF01180 Dihydroorotate dehydrogenase CTC_RS04700 PF01979 Amidohydrolase family CTC_RS04705 PF00672 HAMP domain CTC_RS04705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS04705 PF06580 Histidine kinase CTC_RS04705 PF02743 Cache domain CTC_RS04710 PF00072 Response regulator receiver domain CTC_RS04710 PF00196 Bacterial regulatory proteins, luxR family CTC_RS04715 PF02901 Pyruvate formate lyase-like CTC_RS04715 PF01228 Glycine radical CTC_RS04720 PF04055 Radical SAM superfamily CTC_RS04725 PF09323 Domain of unknown function (DUF1980) CTC_RS04730 PF03773 Predicted permease CTC_RS04740 PF07683 Cobalamin synthesis protein cobW C-terminal domain CTC_RS04740 PF02492 CobW/HypB/UreG, nucleotide-binding domain CTC_RS04745 PF02743 Cache domain CTC_RS04745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS04745 PF00672 HAMP domain CTC_RS04750 PF04198 Putative sugar-binding domain CTC_RS04755 PF00596 Class II Aldolase and Adducin N-terminal domain CTC_RS04760 PF01008 Initiation factor 2 subunit family CTC_RS04765 PF01636 Phosphotransferase enzyme family CTC_RS04775 PF00376 MerR family regulatory protein CTC_RS04775 PF09278 MerR, DNA binding CTC_RS04785 PF04397 LytTr DNA-binding domain CTC_RS04785 PF00072 Response regulator receiver domain CTC_RS04790 PF08269 Cache domain CTC_RS04790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS04800 PF00005 ABC transporter CTC_RS04805 PF01032 FecCD transport family CTC_RS04810 PF01497 Periplasmic binding protein CTC_RS04830 PF01032 FecCD transport family CTC_RS04835 PF00005 ABC transporter CTC_RS04850 PF02583 Metal-sensitive transcriptional repressor CTC_RS04855 PF03190 Protein of unknown function, DUF255 CTC_RS04860 PF03485 Arginyl tRNA synthetase N terminal domain CTC_RS04860 PF05746 DALR anticodon binding domain CTC_RS04860 PF00750 tRNA synthetases class I (R) CTC_RS04870 PF07670 Nucleoside recognition CTC_RS04870 PF02421 Ferrous iron transport protein B CTC_RS04870 PF17910 FeoB cytosolic helical domain CTC_RS04870 PF07664 Ferrous iron transport protein B C terminus CTC_RS04890 PF07729 FCD domain CTC_RS04890 PF00392 Bacterial regulatory proteins, gntR family CTC_RS04895 PF02652 L-lactate permease CTC_RS04900 PF01012 Electron transfer flavoprotein domain CTC_RS04905 PF00766 Electron transfer flavoprotein FAD-binding domain CTC_RS04905 PF01012 Electron transfer flavoprotein domain CTC_RS04910 PF01565 FAD binding domain CTC_RS04910 PF02913 FAD linked oxidases, C-terminal domain CTC_RS04915 PF00749 tRNA synthetases class I (E and Q), catalytic domain CTC_RS04920 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CTC_RS04920 PF00753 Metallo-beta-lactamase superfamily CTC_RS04920 PF10996 Beta-Casp domain CTC_RS04925 PF00892 EamA-like transporter family CTC_RS04930 PF00768 D-alanyl-D-alanine carboxypeptidase CTC_RS04930 PF07943 Penicillin-binding protein 5, C-terminal domain CTC_RS04935 PF00293 NUDIX domain CTC_RS04945 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CTC_RS04945 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CTC_RS04945 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CTC_RS04950 PF00580 UvrD/REP helicase N-terminal domain CTC_RS04950 PF13361 UvrD-like helicase C-terminal domain CTC_RS04955 PF02491 SHS2 domain inserted in FTSA CTC_RS04960 PF00849 RNA pseudouridylate synthase CTC_RS04960 PF01479 S4 domain CTC_RS04965 PF14667 Polysaccharide biosynthesis C-terminal domain CTC_RS04965 PF01943 Polysaccharide biosynthesis protein CTC_RS04970 PF01943 Polysaccharide biosynthesis protein CTC_RS04970 PF14667 Polysaccharide biosynthesis C-terminal domain CTC_RS04990 PF02310 B12 binding domain CTC_RS04990 PF04055 Radical SAM superfamily CTC_RS05000 PF01496 V-type ATPase 116kDa subunit family CTC_RS05005 PF00137 ATP synthase subunit C CTC_RS05010 PF01991 ATP synthase (E/31 kDa) subunit CTC_RS05020 PF01990 ATP synthase (F/14-kDa) subunit CTC_RS05025 PF16886 ATPsynthase alpha/beta subunit N-term extension CTC_RS05025 PF02874 ATP synthase alpha/beta family, beta-barrel domain CTC_RS05025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTC_RS05030 PF02874 ATP synthase alpha/beta family, beta-barrel domain CTC_RS05030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTC_RS05035 PF01813 ATP synthase subunit D CTC_RS05050 PF00258 Flavodoxin CTC_RS05050 PF00753 Metallo-beta-lactamase superfamily CTC_RS05060 PF02525 Flavodoxin-like fold CTC_RS05065 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CTC_RS05070 PF01520 N-acetylmuramoyl-L-alanine amidase CTC_RS05075 PF02603 HPr Serine kinase N terminus CTC_RS05075 PF07475 HPr Serine kinase C-terminal domain CTC_RS05080 PF01812 5-formyltetrahydrofolate cyclo-ligase family CTC_RS05085 PF02127 Aminopeptidase I zinc metalloprotease (M18) CTC_RS05090 PF16916 Dimerisation domain of Zinc Transporter CTC_RS05090 PF01545 Cation efflux family CTC_RS05110 PF02583 Metal-sensitive transcriptional repressor CTC_RS05120 PF06738 Putative threonine/serine exporter CTC_RS05125 PF13375 RnfC Barrel sandwich hybrid domain CTC_RS05125 PF13237 4Fe-4S dicluster domain CTC_RS05125 PF10531 SLBB domain CTC_RS05125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CTC_RS05130 PF03116 NQR2, RnfD, RnfE family CTC_RS05135 PF04205 FMN-binding domain CTC_RS05140 PF02508 Rnf-Nqr subunit, membrane protein CTC_RS05145 PF02508 Rnf-Nqr subunit, membrane protein CTC_RS05150 PF13187 4Fe-4S dicluster domain CTC_RS05150 PF00037 4Fe-4S binding domain CTC_RS05150 PF04060 Putative Fe-S cluster CTC_RS05165 PF02424 ApbE family CTC_RS05170 PF00884 Sulfatase CTC_RS05175 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CTC_RS05175 PF00586 AIR synthase related protein, N-terminal domain CTC_RS05175 PF02769 AIR synthase related protein, C-terminal domain CTC_RS05180 PF02245 Methylpurine-DNA glycosylase (MPG) CTC_RS05200 PF05167 Uncharacterised ACR (DUF711) CTC_RS05205 PF00293 NUDIX domain CTC_RS05215 PF01212 Beta-eliminating lyase CTC_RS05220 PF06798 PrkA serine protein kinase C-terminal domain CTC_RS05220 PF08298 PrkA AAA domain CTC_RS05225 PF04285 Protein of unknown function (DUF444) CTC_RS05230 PF04293 SpoVR like protein CTC_RS05235 PF00171 Aldehyde dehydrogenase family CTC_RS05240 PF00696 Amino acid kinase family CTC_RS05260 PF12002 MgsA AAA+ ATPase C terminal CTC_RS05260 PF05496 Holliday junction DNA helicase RuvB P-loop domain CTC_RS05260 PF16193 AAA C-terminal domain CTC_RS05265 PF02082 Transcriptional regulator CTC_RS05270 PF00266 Aminotransferase class-V CTC_RS05275 PF01592 NifU-like N terminal domain CTC_RS05290 PF01594 AI-2E family transporter CTC_RS05295 PF02272 DHHA1 domain CTC_RS05295 PF01411 tRNA synthetases class II (A) CTC_RS05295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CTC_RS05300 PF06135 IreB regulatory phosphoprotein CTC_RS05305 PF03652 Holliday junction resolvase CTC_RS05310 PF06949 Protein of unknown function (DUF1292) CTC_RS05315 PF01475 Ferric uptake regulator family CTC_RS05320 PF00753 Metallo-beta-lactamase superfamily CTC_RS05320 PF17770 Ribonuclease J C-terminal domain CTC_RS05320 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CTC_RS05325 PF06133 Control of competence regulator ComK, YlbF/YmcA CTC_RS05330 PF03144 Elongation factor Tu domain 2 CTC_RS05330 PF00009 Elongation factor Tu GTP binding domain CTC_RS05330 PF00679 Elongation factor G C-terminus CTC_RS05335 PF02618 YceG-like family CTC_RS05340 PF01596 O-methyltransferase CTC_RS05345 PF01136 Peptidase family U32 CTC_RS05345 PF16325 Peptidase family U32 C-terminal domain CTC_RS05350 PF00485 Phosphoribulokinase / Uridine kinase family CTC_RS05360 PF04542 Sigma-70 region 2 CTC_RS05360 PF04545 Sigma-70, region 4 CTC_RS05410 PF09588 YqaJ-like viral recombinase domain CTC_RS05415 PF03837 RecT family CTC_RS05445 PF00210 Ferritin-like domain CTC_RS05495 PF03592 Terminase small subunit CTC_RS05495 PF10668 Phage terminase small subunit CTC_RS05685 PF11490 DNA polymerase III polC-type N-terminus II CTC_RS05685 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CTC_RS05685 PF07733 Bacterial DNA polymerase III alpha NTPase domain CTC_RS05685 PF14579 Helix-hairpin-helix motif CTC_RS05685 PF02811 PHP domain CTC_RS05685 PF00929 Exonuclease CTC_RS05690 PF04545 Sigma-70, region 4 CTC_RS05690 PF04542 Sigma-70 region 2 CTC_RS05695 PF08501 Shikimate dehydrogenase substrate binding domain CTC_RS05700 PF00437 Type II/IV secretion system protein CTC_RS05710 PF02491 SHS2 domain inserted in FTSA CTC_RS05715 PF12327 FtsZ family, C-terminal domain CTC_RS05715 PF00091 Tubulin/FtsZ family, GTPase domain CTC_RS05720 PF03419 Sporulation factor SpoIIGA CTC_RS05725 PF04542 Sigma-70 region 2 CTC_RS05725 PF04545 Sigma-70, region 4 CTC_RS05730 PF04542 Sigma-70 region 2 CTC_RS05730 PF04545 Sigma-70, region 4 CTC_RS05730 PF04539 Sigma-70 region 3 CTC_RS05735 PF05239 PRC-barrel domain CTC_RS05740 PF03477 ATP cone domain CTC_RS05745 PF00486 Transcriptional regulatory protein, C terminal CTC_RS05745 PF00072 Response regulator receiver domain CTC_RS05750 PF16736 Single Cache-like CTC_RS05750 PF00989 PAS fold CTC_RS05750 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS05755 PF12849 PBP superfamily domain CTC_RS05760 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS05765 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS05770 PF00005 ABC transporter CTC_RS05780 PF01926 50S ribosome-binding GTPase CTC_RS05780 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CTC_RS05785 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CTC_RS05785 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CTC_RS05790 PF09547 Stage IV sporulation protein A (spore_IV_A) CTC_RS05840 PF01867 CRISPR associated protein Cas1 CTC_RS05845 PF09827 CRISPR associated protein Cas2 CTC_RS05855 PF08386 TAP-like protein CTC_RS05855 PF00561 alpha/beta hydrolase fold CTC_RS05870 PF04204 Homoserine O-succinyltransferase CTC_RS05875 PF01053 Cys/Met metabolism PLP-dependent enzyme CTC_RS05885 PF00672 HAMP domain CTC_RS05885 PF05227 CHASE3 domain CTC_RS05885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS05890 PF03063 Prismane/CO dehydrogenase family CTC_RS05895 PF06961 Protein of unknown function (DUF1294) CTC_RS05910 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CTC_RS05910 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CTC_RS05910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTC_RS05910 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CTC_RS05910 PF10371 Domain of unknown function CTC_RS05915 PF01546 Peptidase family M20/M25/M40 CTC_RS05925 PF16326 ABC transporter C-terminal domain CTC_RS05925 PF12848 ABC transporter CTC_RS05925 PF00005 ABC transporter CTC_RS05960 PF07739 TipAS antibiotic-recognition domain CTC_RS05960 PF13411 MerR HTH family regulatory protein CTC_RS05965 PF01259 SAICAR synthetase CTC_RS05970 PF00455 DeoR C terminal sensor domain CTC_RS05970 PF08220 DeoR-like helix-turn-helix domain CTC_RS05975 PF01235 Sodium:alanine symporter family CTC_RS05980 PF07690 Major Facilitator Superfamily CTC_RS05990 PF04143 Sulphur transport CTC_RS06000 PF04143 Sulphur transport CTC_RS06005 PF03466 LysR substrate binding domain CTC_RS06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTC_RS06010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CTC_RS06010 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTC_RS06015 PF04143 Sulphur transport CTC_RS06020 PF00704 Glycosyl hydrolases family 18 CTC_RS06020 PF01476 LysM domain CTC_RS06025 PF03960 ArsC family CTC_RS06030 PF02915 Rubrerythrin CTC_RS06035 PF00999 Sodium/hydrogen exchanger family CTC_RS06040 PF07501 G5 domain CTC_RS06040 PF06725 3D domain CTC_RS06040 PF03990 G5-linked-Ubiquitin-like domain CTC_RS06045 PF01522 Polysaccharide deacetylase CTC_RS06050 PF01235 Sodium:alanine symporter family CTC_RS06065 PF00209 Sodium:neurotransmitter symporter family CTC_RS06070 PF03734 L,D-transpeptidase catalytic domain CTC_RS06070 PF01476 LysM domain CTC_RS06090 PF01032 FecCD transport family CTC_RS06095 PF00005 ABC transporter CTC_RS06105 PF00005 ABC transporter CTC_RS06105 PF00664 ABC transporter transmembrane region CTC_RS06110 PF00005 ABC transporter CTC_RS06110 PF00664 ABC transporter transmembrane region CTC_RS06120 PF01520 N-acetylmuramoyl-L-alanine amidase CTC_RS06120 PF04122 Putative cell wall binding repeat 2 CTC_RS06130 PF00753 Metallo-beta-lactamase superfamily CTC_RS06135 PF13735 tRNA nucleotidyltransferase domain 2 putative CTC_RS06135 PF12627 Probable RNA and SrmB- binding site of polymerase A CTC_RS06135 PF01743 Poly A polymerase head domain CTC_RS06140 PF01541 GIY-YIG catalytic domain CTC_RS06150 PF07670 Nucleoside recognition CTC_RS06150 PF07664 Ferrous iron transport protein B C terminus CTC_RS06150 PF02421 Ferrous iron transport protein B CTC_RS06150 PF17910 FeoB cytosolic helical domain CTC_RS06175 PF00692 dUTPase CTC_RS06180 PF12729 Four helix bundle sensory module for signal transduction CTC_RS06180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS06180 PF00672 HAMP domain CTC_RS06185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTC_RS06185 PF03466 LysR substrate binding domain CTC_RS06190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CTC_RS06190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CTC_RS06190 PF13187 4Fe-4S dicluster domain CTC_RS06200 PF03755 YicC-like family, N-terminal region CTC_RS06200 PF08340 Domain of unknown function (DUF1732) CTC_RS06205 PF04025 Domain of unknown function (DUF370) CTC_RS06210 PF00625 Guanylate kinase CTC_RS06215 PF01192 RNA polymerase Rpb6 CTC_RS06220 PF02441 Flavoprotein CTC_RS06220 PF04127 DNA / pantothenate metabolism flavoprotein CTC_RS06225 PF04851 Type III restriction enzyme, res subunit CTC_RS06225 PF18074 Primosomal protein N C-terminal domain CTC_RS06225 PF17764 3′ DNA-binding domain (3′BD) CTC_RS06225 PF00271 Helicase conserved C-terminal domain CTC_RS06225 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CTC_RS06230 PF01327 Polypeptide deformylase CTC_RS06235 PF00551 Formyl transferase CTC_RS06235 PF02911 Formyl transferase, C-terminal domain CTC_RS06240 PF04298 Putative neutral zinc metallopeptidase CTC_RS06245 PF01029 NusB family CTC_RS06245 PF01189 16S rRNA methyltransferase RsmB/F CTC_RS06250 PF04055 Radical SAM superfamily CTC_RS06260 PF00069 Protein kinase domain CTC_RS06260 PF03793 PASTA domain CTC_RS06265 PF03193 RsgA GTPase CTC_RS06265 PF16745 RsgA N-terminal domain CTC_RS06270 PF00834 Ribulose-phosphate 3 epimerase family CTC_RS06280 PF00830 Ribosomal L28 family CTC_RS06285 PF03780 Asp23 family, cell envelope-related function CTC_RS06290 PF02734 DAK2 domain CTC_RS06290 PF13684 Dihydroxyacetone kinase family CTC_RS06295 PF00271 Helicase conserved C-terminal domain CTC_RS06295 PF00270 DEAD/DEAH box helicase CTC_RS06295 PF17191 RecG wedge domain CTC_RS06305 PF01467 Cytidylyltransferase-like CTC_RS06320 PF09997 Predicted membrane protein (DUF2238) CTC_RS06325 PF05636 HIGH Nucleotidyl Transferase CTC_RS06330 PF01515 Phosphate acetyl/butaryl transferase CTC_RS06335 PF00871 Acetokinase family CTC_RS06345 PF01783 Ribosomal L32p protein family CTC_RS06350 PF02504 Fatty acid synthesis protein CTC_RS06355 PF00550 Phosphopantetheine attachment site CTC_RS06360 PF00035 Double-stranded RNA binding motif CTC_RS06360 PF14622 Ribonuclease-III-like CTC_RS06370 PF04232 Stage V sporulation protein S (SpoVS) CTC_RS06375 PF02463 RecF/RecN/SMC N terminal domain CTC_RS06375 PF06470 SMC proteins Flexible Hinge Domain CTC_RS06380 PF02881 SRP54-type protein, helical bundle domain CTC_RS06380 PF00448 SRP54-type protein, GTPase domain CTC_RS06385 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CTC_RS06390 PF02881 SRP54-type protein, helical bundle domain CTC_RS06390 PF00448 SRP54-type protein, GTPase domain CTC_RS06390 PF02978 Signal peptide binding domain CTC_RS06395 PF00886 Ribosomal protein S16 CTC_RS06405 PF01782 RimM N-terminal domain CTC_RS06405 PF05239 PRC-barrel domain CTC_RS06410 PF01746 tRNA (Guanine-1)-methyltransferase CTC_RS06415 PF01245 Ribosomal protein L19 CTC_RS06420 PF10502 Signal peptidase, peptidase S26 CTC_RS06425 PF01926 50S ribosome-binding GTPase CTC_RS06430 PF01351 Ribonuclease HII CTC_RS06435 PF02021 Uncharacterised protein family UPF0102 CTC_RS06440 PF01078 Magnesium chelatase, subunit ChlI CTC_RS06440 PF13335 Magnesium chelatase, subunit ChlI C-terminal CTC_RS06445 PF17782 DprA winged helix domain CTC_RS06445 PF02481 DNA recombination-mediator protein A CTC_RS06450 PF01131 DNA topoisomerase CTC_RS06450 PF01751 Toprim domain CTC_RS06450 PF01396 Topoisomerase DNA binding C4 zinc finger CTC_RS06455 PF08222 CodY helix-turn-helix domain CTC_RS06455 PF06018 CodY GAF-like domain CTC_RS06460 PF00318 Ribosomal protein S2 CTC_RS06465 PF00889 Elongation factor TS CTC_RS06470 PF00696 Amino acid kinase family CTC_RS06475 PF01765 Ribosome recycling factor CTC_RS06480 PF01255 Putative undecaprenyl diphosphate synthase CTC_RS06495 PF13288 DXP reductoisomerase C-terminal domain CTC_RS06495 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CTC_RS06495 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CTC_RS06500 PF02163 Peptidase family M50 CTC_RS06500 PF17820 PDZ domain CTC_RS06505 PF04551 GcpE protein CTC_RS06510 PF14579 Helix-hairpin-helix motif CTC_RS06510 PF02811 PHP domain CTC_RS06510 PF00929 Exonuclease CTC_RS06510 PF01336 OB-fold nucleic acid binding domain CTC_RS06510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CTC_RS06510 PF07733 Bacterial DNA polymerase III alpha NTPase domain CTC_RS06510 PF11490 DNA polymerase III polC-type N-terminus II CTC_RS06515 PF17384 RimP C-terminal SH3 domain CTC_RS06515 PF02576 RimP N-terminal domain CTC_RS06520 PF00575 S1 RNA binding domain CTC_RS06520 PF08529 NusA N-terminal domain CTC_RS06520 PF13184 NusA-like KH domain CTC_RS06525 PF04296 Protein of unknown function (DUF448) CTC_RS06535 PF11987 Translation-initiation factor 2 CTC_RS06535 PF00009 Elongation factor Tu GTP binding domain CTC_RS06535 PF04760 Translation initiation factor IF-2, N-terminal region CTC_RS06540 PF02033 Ribosome-binding factor A CTC_RS06545 PF02272 DHHA1 domain CTC_RS06545 PF01368 DHH family CTC_RS06550 PF01509 TruB family pseudouridylate synthase (N terminal domain) CTC_RS06550 PF16198 tRNA pseudouridylate synthase B C-terminal domain CTC_RS06555 PF01687 Riboflavin kinase CTC_RS06555 PF06574 FAD synthetase CTC_RS06560 PF00312 Ribosomal protein S15 CTC_RS06565 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CTC_RS06565 PF01138 3' exoribonuclease family, domain 1 CTC_RS06565 PF03725 3' exoribonuclease family, domain 2 CTC_RS06565 PF00575 S1 RNA binding domain CTC_RS06565 PF00013 KH domain CTC_RS06570 PF00675 Insulinase (Peptidase family M16) CTC_RS06570 PF05193 Peptidase M16 inactive domain CTC_RS06580 PF13840 ACT domain CTC_RS06580 PF00696 Amino acid kinase family CTC_RS06585 PF00574 Clp protease CTC_RS06590 PF17854 FtsK alpha domain CTC_RS06590 PF01580 FtsK/SpoIIIE family CTC_RS06590 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CTC_RS06590 PF09397 Ftsk gamma domain CTC_RS06595 PF00919 Uncharacterized protein family UPF0004 CTC_RS06595 PF18693 TRAM domain CTC_RS06595 PF04055 Radical SAM superfamily CTC_RS06600 PF01066 CDP-alcohol phosphatidyltransferase CTC_RS06605 PF00154 recA bacterial DNA recombination protein CTC_RS06610 PF01966 HD domain CTC_RS06610 PF00013 KH domain CTC_RS06610 PF12072 Domain of unknown function (DUF3552) CTC_RS06615 PF04232 Stage V sporulation protein S (SpoVS) CTC_RS06620 PF01040 UbiA prenyltransferase family CTC_RS06630 PF00892 EamA-like transporter family CTC_RS06635 PF00155 Aminotransferase class I and II CTC_RS06640 PF00381 PTS HPr component phosphorylation site CTC_RS06645 PF04070 Domain of unknown function (DUF378) CTC_RS06650 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CTC_RS06650 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CTC_RS06655 PF00589 Phage integrase family CTC_RS06655 PF02899 Phage integrase, N-terminal SAM-like domain CTC_RS06665 PF00717 Peptidase S24-like CTC_RS06665 PF01726 LexA DNA binding domain CTC_RS06670 PF06838 Methionine gamma-lyase CTC_RS06675 PF17209 Hfq protein CTC_RS06685 PF01119 DNA mismatch repair protein, C-terminal domain CTC_RS06685 PF08676 MutL C terminal dimerisation domain CTC_RS06690 PF05188 MutS domain II CTC_RS06690 PF00488 MutS domain V CTC_RS06690 PF05190 MutS family domain IV CTC_RS06690 PF05192 MutS domain III CTC_RS06690 PF01624 MutS domain I CTC_RS06695 PF04055 Radical SAM superfamily CTC_RS06695 PF01938 TRAM domain CTC_RS06695 PF00919 Uncharacterized protein family UPF0004 CTC_RS06725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS06725 PF00672 HAMP domain CTC_RS06725 PF02743 Cache domain CTC_RS06730 PF00155 Aminotransferase class I and II CTC_RS06745 PF02675 S-adenosylmethionine decarboxylase CTC_RS06750 PF00575 S1 RNA binding domain CTC_RS06750 PF02401 LytB protein CTC_RS06755 PF02224 Cytidylate kinase CTC_RS06770 PF01380 SIS domain CTC_RS06770 PF01418 Helix-turn-helix domain, rpiR family CTC_RS06775 PF00849 RNA pseudouridylate synthase CTC_RS06775 PF01479 S4 domain CTC_RS06780 PF02535 ZIP Zinc transporter CTC_RS06795 PF03806 AbgT putative transporter family CTC_RS06805 PF01926 50S ribosome-binding GTPase CTC_RS06805 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CTC_RS06815 PF06968 Biotin and Thiamin Synthesis associated domain CTC_RS06815 PF04055 Radical SAM superfamily CTC_RS06840 PF00456 Transketolase, thiamine diphosphate binding domain CTC_RS06840 PF02780 Transketolase, C-terminal domain CTC_RS06840 PF02779 Transketolase, pyrimidine binding domain CTC_RS06845 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CTC_RS06845 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CTC_RS06865 PF00361 Proton-conducting membrane transporter CTC_RS06870 PF00361 Proton-conducting membrane transporter CTC_RS06875 PF00361 Proton-conducting membrane transporter CTC_RS06880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CTC_RS06895 PF03334 Na+/H+ antiporter subunit CTC_RS06900 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CTC_RS06905 PF01899 Na+/H+ ion antiporter subunit CTC_RS06910 PF00291 Pyridoxal-phosphate dependent enzyme CTC_RS06915 PF02082 Transcriptional regulator CTC_RS06920 PF02659 Putative manganese efflux pump CTC_RS06930 PF07556 Protein of unknown function (DUF1538) CTC_RS06940 PF03448 MgtE intracellular N domain CTC_RS06940 PF00571 CBS domain CTC_RS06940 PF01769 Divalent cation transporter CTC_RS06950 PF03180 NLPA lipoprotein CTC_RS06955 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS06960 PF00005 ABC transporter CTC_RS06960 PF09383 NIL domain CTC_RS06965 PF01066 CDP-alcohol phosphatidyltransferase CTC_RS06970 PF00005 ABC transporter CTC_RS06980 PF00266 Aminotransferase class-V CTC_RS06985 PF01255 Putative undecaprenyl diphosphate synthase CTC_RS06990 PF00269 Small, acid-soluble spore proteins, alpha/beta type CTC_RS06995 PF12833 Helix-turn-helix domain CTC_RS07000 PF01554 MatE CTC_RS07005 PF13567 Domain of unknown function (DUF4131) CTC_RS07005 PF03772 Competence protein CTC_RS07005 PF00753 Metallo-beta-lactamase superfamily CTC_RS07015 PF00171 Aldehyde dehydrogenase family CTC_RS07015 PF00465 Iron-containing alcohol dehydrogenase CTC_RS07035 PF00005 ABC transporter CTC_RS07040 PF01032 FecCD transport family CTC_RS07050 PF02001 Protein of unknown function DUF134 CTC_RS07055 PF00892 EamA-like transporter family CTC_RS07060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTC_RS07060 PF00005 ABC transporter CTC_RS07065 PF00005 ABC transporter CTC_RS07070 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS07075 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS07080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTC_RS07095 PF01134 Glucose inhibited division protein A CTC_RS07105 PF04205 FMN-binding domain CTC_RS07105 PF01794 Ferric reductase like transmembrane component CTC_RS07130 PF00753 Metallo-beta-lactamase superfamily CTC_RS07130 PF00258 Flavodoxin CTC_RS07135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTC_RS07135 PF02770 Acyl-CoA dehydrogenase, middle domain CTC_RS07135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTC_RS07140 PF01048 Phosphorylase superfamily CTC_RS07145 PF01676 Metalloenzyme superfamily CTC_RS07150 PF01773 Na+ dependent nucleoside transporter N-terminus CTC_RS07150 PF07662 Na+ dependent nucleoside transporter C-terminus CTC_RS07150 PF07670 Nucleoside recognition CTC_RS07155 PF00392 Bacterial regulatory proteins, gntR family CTC_RS07155 PF07702 UTRA domain CTC_RS07160 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS07165 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CTC_RS07170 PF00005 ABC transporter CTC_RS07185 PF16320 Ribosomal protein L7/L12 dimerisation domain CTC_RS07185 PF00542 Ribosomal protein L7/L12 C-terminal domain CTC_RS07200 PF01661 Macro domain CTC_RS07205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTC_RS07210 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS07215 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS07215 PF12911 N-terminal TM domain of oligopeptide transport permease C CTC_RS07220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTC_RS07220 PF00005 ABC transporter CTC_RS07225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTC_RS07225 PF00005 ABC transporter CTC_RS07235 PF00665 Integrase core domain CTC_RS07235 PF13333 Integrase core domain CTC_RS07235 PF13276 HTH-like domain CTC_RS07245 PF00005 ABC transporter CTC_RS07245 PF00664 ABC transporter transmembrane region CTC_RS07250 PF00005 ABC transporter CTC_RS07250 PF08021 Siderophore-interacting FAD-binding domain CTC_RS07250 PF04954 Siderophore-interacting protein CTC_RS07250 PF00664 ABC transporter transmembrane region CTC_RS07255 PF12833 Helix-turn-helix domain CTC_RS07260 PF04892 VanZ like family CTC_RS07265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CTC_RS07265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CTC_RS07290 PF08780 Nucleotidyltransferase substrate binding protein like CTC_RS07305 PF00005 ABC transporter CTC_RS07310 PF00672 HAMP domain CTC_RS07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS07310 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS07315 PF00486 Transcriptional regulatory protein, C terminal CTC_RS07315 PF00072 Response regulator receiver domain CTC_RS07330 PF00916 Sulfate permease family CTC_RS07330 PF01740 STAS domain CTC_RS07335 PF00302 Chloramphenicol acetyltransferase CTC_RS07375 PF01381 Helix-turn-helix CTC_RS07380 PF02463 RecF/RecN/SMC N terminal domain CTC_RS07410 PF12833 Helix-turn-helix domain CTC_RS07410 PF06445 GyrI-like small molecule binding domain CTC_RS07435 PF03772 Competence protein CTC_RS07435 PF00753 Metallo-beta-lactamase superfamily CTC_RS07435 PF13567 Domain of unknown function (DUF4131) CTC_RS07445 PF07883 Cupin domain CTC_RS07445 PF01381 Helix-turn-helix CTC_RS07455 PF00936 BMC domain CTC_RS07460 PF06130 Phosphate propanoyltransferase CTC_RS07465 PF00171 Aldehyde dehydrogenase family CTC_RS07465 PF00465 Iron-containing alcohol dehydrogenase CTC_RS07470 PF00936 BMC domain CTC_RS07475 PF06249 Ethanolamine utilisation protein EutQ CTC_RS07480 PF03319 Ethanolamine utilisation protein EutN/carboxysome CTC_RS07500 PF10662 Ethanolamine utilisation - propanediol utilisation CTC_RS07505 PF00936 BMC domain CTC_RS07510 PF13187 4Fe-4S dicluster domain CTC_RS07510 PF04055 Radical SAM superfamily CTC_RS07515 PF02901 Pyruvate formate lyase-like CTC_RS07515 PF01228 Glycine radical CTC_RS07520 PF00936 BMC domain CTC_RS07525 PF00936 BMC domain CTC_RS07540 PF07739 TipAS antibiotic-recognition domain CTC_RS07540 PF13411 MerR HTH family regulatory protein CTC_RS07545 PF00465 Iron-containing alcohol dehydrogenase CTC_RS07565 PF00266 Aminotransferase class-V CTC_RS07585 PF09827 CRISPR associated protein Cas2 CTC_RS07590 PF01867 CRISPR associated protein Cas1 CTC_RS07685 PF00282 Pyridoxal-dependent decarboxylase conserved domain CTC_RS07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS07700 PF00672 HAMP domain CTC_RS07700 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS07705 PF00072 Response regulator receiver domain CTC_RS07705 PF00486 Transcriptional regulatory protein, C terminal CTC_RS07725 PF12679 ABC-2 family transporter protein CTC_RS07730 PF00005 ABC transporter CTC_RS07735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS07740 PF03358 NADPH-dependent FMN reductase CTC_RS07740 PF04205 FMN-binding domain CTC_RS07740 PF00890 FAD binding domain CTC_RS07745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS07745 PF00183 Hsp90 protein CTC_RS07755 PF00072 Response regulator receiver domain CTC_RS07755 PF00486 Transcriptional regulatory protein, C terminal CTC_RS07760 PF13426 PAS domain CTC_RS07760 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS07760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS07760 PF00672 HAMP domain CTC_RS07770 PF00005 ABC transporter CTC_RS07795 PF00270 DEAD/DEAH box helicase CTC_RS07795 PF03880 DbpA RNA binding domain CTC_RS07795 PF00271 Helicase conserved C-terminal domain CTC_RS07800 PF01906 Putative heavy-metal-binding CTC_RS07810 PF06207 Protein of unknown function (DUF1002) CTC_RS07835 PF00672 HAMP domain CTC_RS07835 PF05227 CHASE3 domain CTC_RS07835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS07840 PF00209 Sodium:neurotransmitter symporter family CTC_RS07845 PF01212 Beta-eliminating lyase CTC_RS07850 PF00672 HAMP domain CTC_RS07850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS07850 PF05227 CHASE3 domain CTC_RS07875 PF00575 S1 RNA binding domain CTC_RS07890 PF00890 FAD binding domain CTC_RS07890 PF14537 Cytochrome c3 CTC_RS07895 PF04703 FaeA-like protein CTC_RS07895 PF00072 Response regulator receiver domain CTC_RS07900 PF17203 Single cache domain 3 CTC_RS07900 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CTC_RS07900 PF00989 PAS fold CTC_RS07900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS07905 PF07943 Penicillin-binding protein 5, C-terminal domain CTC_RS07905 PF00768 D-alanyl-D-alanine carboxypeptidase CTC_RS07915 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CTC_RS07920 PF04079 Segregation and condensation complex subunit ScpB CTC_RS07925 PF02616 Segregation and condensation protein ScpA CTC_RS07930 PF07943 Penicillin-binding protein 5, C-terminal domain CTC_RS07930 PF00768 D-alanyl-D-alanine carboxypeptidase CTC_RS07935 PF01048 Phosphorylase superfamily CTC_RS07940 PF02899 Phage integrase, N-terminal SAM-like domain CTC_RS07940 PF00589 Phage integrase family CTC_RS07965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS07965 PF02743 Cache domain CTC_RS07965 PF00672 HAMP domain CTC_RS08085 PF02796 Helix-turn-helix domain of resolvase CTC_RS08085 PF00239 Resolvase, N terminal domain CTC_RS08155 PF02899 Phage integrase, N-terminal SAM-like domain CTC_RS08155 PF00589 Phage integrase family CTC_RS08160 PF08769 Sporulation initiation factor Spo0A C terminal CTC_RS08160 PF00072 Response regulator receiver domain CTC_RS08165 PF17820 PDZ domain CTC_RS08165 PF05580 SpoIVB peptidase S55 CTC_RS08170 PF13476 AAA domain CTC_RS08175 PF02863 Arginine repressor, C-terminal domain CTC_RS08175 PF01316 Arginine repressor, DNA binding domain CTC_RS08180 PF01513 ATP-NAD kinase CTC_RS08185 PF01479 S4 domain CTC_RS08185 PF01728 FtsJ-like methyltransferase CTC_RS08190 PF02780 Transketolase, C-terminal domain CTC_RS08190 PF02779 Transketolase, pyrimidine binding domain CTC_RS08190 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CTC_RS08200 PF00348 Polyprenyl synthetase CTC_RS08205 PF02609 Exonuclease VII small subunit CTC_RS08210 PF13742 OB-fold nucleic acid binding domain CTC_RS08210 PF02601 Exonuclease VII, large subunit CTC_RS08215 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CTC_RS08215 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CTC_RS08220 PF01029 NusB family CTC_RS08225 PF03780 Asp23 family, cell envelope-related function CTC_RS08245 PF09546 Stage III sporulation protein AE (spore_III_AE) CTC_RS08250 PF06686 Stage III sporulation protein AC/AD protein family CTC_RS08255 PF06686 Stage III sporulation protein AC/AD protein family CTC_RS08275 PF01132 Elongation factor P (EF-P) OB domain CTC_RS08275 PF08207 Elongation factor P (EF-P) KOW-like domain CTC_RS08275 PF09285 Elongation factor P, C-terminal CTC_RS08280 PF01321 Creatinase/Prolidase N-terminal domain CTC_RS08280 PF00557 Metallopeptidase family M24 CTC_RS08285 PF01220 Dehydroquinase class II CTC_RS08290 PF01202 Shikimate kinase CTC_RS08325 PF07963 Prokaryotic N-terminal methylation motif CTC_RS08325 PF14245 Type IV pilin PilA CTC_RS08330 PF00482 Type II secretion system (T2SS), protein F CTC_RS08335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CTC_RS08335 PF00437 Type II/IV secretion system protein CTC_RS08345 PF05670 NFACT protein RNA binding domain CTC_RS08365 PF03372 Endonuclease/Exonuclease/phosphatase family CTC_RS08370 PF00860 Permease family CTC_RS08375 PF00156 Phosphoribosyl transferase domain CTC_RS08380 PF01479 S4 domain CTC_RS08380 PF00849 RNA pseudouridylate synthase CTC_RS08385 PF01252 Signal peptidase (SPase) II CTC_RS08390 PF01258 Prokaryotic dksA/traR C4-type zinc finger CTC_RS08395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CTC_RS08400 PF01817 Chorismate mutase type II CTC_RS08400 PF00793 DAHP synthetase I family CTC_RS08405 PF01048 Phosphorylase superfamily CTC_RS08410 PF01761 3-dehydroquinate synthase CTC_RS08415 PF05103 DivIVA protein CTC_RS08430 PF04472 Cell division protein SepF CTC_RS08435 PF01168 Alanine racemase, N-terminal domain CTC_RS08445 PF06947 Protein of unknown function (DUF1290) CTC_RS08450 PF05949 Bacterial protein of unknown function (DUF881) CTC_RS08455 PF08478 POTRA domain, FtsQ-type CTC_RS08455 PF03799 Cell division protein FtsQ CTC_RS08460 PF01098 Cell cycle protein CTC_RS08465 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CTC_RS08465 PF00953 Glycosyl transferase family 4 CTC_RS08470 PF01225 Mur ligase family, catalytic domain CTC_RS08470 PF08245 Mur ligase middle domain CTC_RS08470 PF02875 Mur ligase family, glutamate ligase domain CTC_RS08475 PF02875 Mur ligase family, glutamate ligase domain CTC_RS08475 PF08245 Mur ligase middle domain CTC_RS08475 PF01225 Mur ligase family, catalytic domain CTC_RS08480 PF03717 Penicillin-binding Protein dimerisation domain CTC_RS08480 PF03793 PASTA domain CTC_RS08480 PF00905 Penicillin binding protein transpeptidase domain CTC_RS08490 PF01795 MraW methylase family CTC_RS08495 PF02381 MraZ protein, putative antitoxin-like CTC_RS08500 PF02254 TrkA-N domain CTC_RS08500 PF02080 TrkA-C domain CTC_RS08500 PF00999 Sodium/hydrogen exchanger family CTC_RS08505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CTC_RS08510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CTC_RS08515 PF13411 MerR HTH family regulatory protein CTC_RS08515 PF06445 GyrI-like small molecule binding domain CTC_RS08520 PF01926 50S ribosome-binding GTPase CTC_RS08520 PF06071 Protein of unknown function (DUF933) CTC_RS08525 PF13654 AAA domain CTC_RS08525 PF05362 Lon protease (S16) C-terminal proteolytic domain CTC_RS08535 PF00690 Cation transporter/ATPase, N-terminus CTC_RS08535 PF00689 Cation transporting ATPase, C-terminus CTC_RS08540 PF07085 DRTGG domain CTC_RS08540 PF02833 DHHA2 domain CTC_RS08540 PF01368 DHH family CTC_RS08540 PF00571 CBS domain CTC_RS08550 PF00460 Flagella basal body rod protein CTC_RS08550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CTC_RS08555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CTC_RS08555 PF00460 Flagella basal body rod protein CTC_RS08570 PF04539 Sigma-70 region 3 CTC_RS08570 PF04542 Sigma-70 region 2 CTC_RS08570 PF04545 Sigma-70, region 4 CTC_RS08580 PF10609 NUBPL iron-transfer P-loop NTPase CTC_RS08585 PF00448 SRP54-type protein, GTPase domain CTC_RS08590 PF00771 FHIPEP family CTC_RS08600 PF01313 Bacterial export proteins, family 3 CTC_RS08605 PF00813 FliP family CTC_RS08620 PF13677 Membrane MotB of proton-channel complex MotA/MotB CTC_RS08620 PF00691 OmpA family CTC_RS08625 PF01618 MotA/TolQ/ExbB proton channel family CTC_RS08630 PF06289 Flagellar and Swarming motility proteins CTC_RS08635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CTC_RS08635 PF00460 Flagella basal body rod protein CTC_RS08645 PF03963 Flagellar hook capping protein - N-terminal region CTC_RS08660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTC_RS08660 PF18269 T3SS EscN ATPase C-terminal domain CTC_RS08660 PF02874 ATP synthase alpha/beta family, beta-barrel domain CTC_RS08670 PF01706 FliG C-terminal domain CTC_RS08670 PF14841 FliG middle domain CTC_RS08670 PF14842 FliG N-terminal domain CTC_RS08675 PF08345 Flagellar M-ring protein C-terminal CTC_RS08675 PF01514 Secretory protein of YscJ/FliF family CTC_RS08680 PF02049 Flagellar hook-basal body complex protein FliE CTC_RS08685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CTC_RS08685 PF00460 Flagella basal body rod protein CTC_RS08695 PF00700 Bacterial flagellin C-terminal helical region CTC_RS08695 PF00669 Bacterial flagellin N-terminal helical region CTC_RS08700 PF02645 Uncharacterised protein, DegV family COG1307 CTC_RS08705 PF00436 Single-strand binding protein family CTC_RS08710 PF00132 Bacterial transferase hexapeptide (six repeats) CTC_RS08720 PF00005 ABC transporter CTC_RS08740 PF12822 ECF transporter, substrate-specific component CTC_RS08750 PF05979 Bacterial protein of unknown function (DUF896) CTC_RS08755 PF00700 Bacterial flagellin C-terminal helical region CTC_RS08755 PF00669 Bacterial flagellin N-terminal helical region CTC_RS08775 PF00072 Response regulator receiver domain CTC_RS08775 PF00486 Transcriptional regulatory protein, C terminal CTC_RS08805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTC_RS08805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTC_RS08810 PF00266 Aminotransferase class-V CTC_RS08815 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS08820 PF00005 ABC transporter CTC_RS08830 PF12804 MobA-like NTP transferase domain CTC_RS08840 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CTC_RS08840 PF02843 Phosphoribosylglycinamide synthetase, C domain CTC_RS08840 PF02844 Phosphoribosylglycinamide synthetase, N domain CTC_RS08845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CTC_RS08850 PF16363 GDP-mannose 4,6 dehydratase CTC_RS08860 PF02348 Cytidylyltransferase CTC_RS08865 PF03102 NeuB family CTC_RS08865 PF08666 SAF domain CTC_RS08870 PF02719 Polysaccharide biosynthesis protein CTC_RS08885 PF00700 Bacterial flagellin C-terminal helical region CTC_RS08885 PF00669 Bacterial flagellin N-terminal helical region CTC_RS08895 PF07195 Flagellar hook-associated protein 2 C-terminus CTC_RS08895 PF07196 Flagellin hook IN motif CTC_RS08895 PF02465 Flagellar hook-associated protein 2 N-terminus CTC_RS08900 PF02561 Flagellar protein FliS CTC_RS08915 PF02599 Global regulator protein family CTC_RS08920 PF02623 FliW protein CTC_RS08925 PF00700 Bacterial flagellin C-terminal helical region CTC_RS08925 PF00669 Bacterial flagellin N-terminal helical region CTC_RS08930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CTC_RS08930 PF00460 Flagella basal body rod protein CTC_RS08945 PF04509 CheC-like family CTC_RS08945 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CTC_RS08950 PF02154 Flagellar motor switch protein FliM CTC_RS08950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CTC_RS08955 PF01584 CheW-like domain CTC_RS08960 PF00072 Response regulator receiver domain CTC_RS08965 PF04509 CheC-like family CTC_RS08970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS08970 PF02895 Signal transducing histidine kinase, homodimeric domain CTC_RS08970 PF07194 P2 response regulator binding domain CTC_RS08970 PF01627 Hpt domain CTC_RS08970 PF01584 CheW-like domain CTC_RS08975 PF01739 CheR methyltransferase, SAM binding domain CTC_RS08975 PF03705 CheR methyltransferase, all-alpha domain CTC_RS08985 PF03975 CheD chemotactic sensory transduction CTC_RS08990 PF01584 CheW-like domain CTC_RS09005 PF01063 Amino-transferase class IV CTC_RS09020 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CTC_RS09020 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CTC_RS09020 PF10371 Domain of unknown function CTC_RS09020 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CTC_RS09020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTC_RS09025 PF03358 NADPH-dependent FMN reductase CTC_RS09030 PF03033 Glycosyltransferase family 28 N-terminal domain CTC_RS09030 PF04101 Glycosyltransferase family 28 C-terminal domain CTC_RS09035 PF00269 Small, acid-soluble spore proteins, alpha/beta type CTC_RS09040 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CTC_RS09040 PF17768 RecJ OB domain CTC_RS09040 PF02272 DHHA1 domain CTC_RS09040 PF01368 DHH family CTC_RS09050 PF02581 Thiamine monophosphate synthase CTC_RS09060 PF05690 Thiazole biosynthesis protein ThiG CTC_RS09065 PF00899 ThiF family CTC_RS09075 PF02581 Thiamine monophosphate synthase CTC_RS09080 PF02110 Hydroxyethylthiazole kinase family CTC_RS09085 PF08543 Phosphomethylpyrimidine kinase CTC_RS09100 PF01965 DJ-1/PfpI family CTC_RS09110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CTC_RS09110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CTC_RS09115 PF04309 Glycerol-3-phosphate responsive antiterminator CTC_RS09120 PF03610 PTS system fructose IIA component CTC_RS09125 PF02734 DAK2 domain CTC_RS09130 PF02733 Dak1 domain CTC_RS09135 PF00491 Arginase family CTC_RS09140 PF08448 PAS fold CTC_RS09140 PF00990 Diguanylate cyclase, GGDEF domain CTC_RS09145 PF00521 DNA gyrase/topoisomerase IV, subunit A CTC_RS09145 PF03989 DNA gyrase C-terminal domain, beta-propeller CTC_RS09150 PF01751 Toprim domain CTC_RS09150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS09150 PF00986 DNA gyrase B subunit, carboxyl terminus CTC_RS09150 PF00204 DNA gyrase B CTC_RS09155 PF09335 SNARE associated Golgi protein CTC_RS09165 PF05524 PEP-utilising enzyme, N-terminal CTC_RS09165 PF00391 PEP-utilising enzyme, mobile domain CTC_RS09165 PF02896 PEP-utilising enzyme, TIM barrel domain CTC_RS09175 PF04294 VanW like protein CTC_RS09185 PF01594 AI-2E family transporter CTC_RS09190 PF03323 Bacillus/Clostridium GerA spore germination protein CTC_RS09210 PF06496 Protein of unknown function (DUF1097) CTC_RS09215 PF01979 Amidohydrolase family CTC_RS09225 PF00563 EAL domain CTC_RS09225 PF03707 Bacterial signalling protein N terminal repeat CTC_RS09225 PF00990 Diguanylate cyclase, GGDEF domain CTC_RS09255 PF04542 Sigma-70 region 2 CTC_RS09255 PF08281 Sigma-70, region 4 CTC_RS09265 PF09370 Phosphoenolpyruvate hydrolase-like CTC_RS09275 PF00072 Response regulator receiver domain CTC_RS09275 PF00158 Sigma-54 interaction domain CTC_RS09275 PF02954 Bacterial regulatory protein, Fis family CTC_RS09285 PF01554 MatE CTC_RS09300 PF00005 ABC transporter CTC_RS09305 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS09305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS09310 PF00486 Transcriptional regulatory protein, C terminal CTC_RS09310 PF00072 Response regulator receiver domain CTC_RS09315 PF02965 Vitamin B12 dependent methionine synthase, activation domain CTC_RS09315 PF00809 Pterin binding enzyme CTC_RS09315 PF02310 B12 binding domain CTC_RS09315 PF02607 B12 binding domain CTC_RS09315 PF02574 Homocysteine S-methyltransferase CTC_RS09325 PF01266 FAD dependent oxidoreductase CTC_RS09330 PF07282 Putative transposase DNA-binding domain CTC_RS09330 PF01385 Probable transposase CTC_RS09330 PF12323 Helix-turn-helix domain CTC_RS09345 PF00664 ABC transporter transmembrane region CTC_RS09345 PF00005 ABC transporter CTC_RS09350 PF00491 Arginase family CTC_RS09365 PF12850 Calcineurin-like phosphoesterase superfamily domain CTC_RS09380 PF16736 Single Cache-like CTC_RS09380 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS09380 PF00989 PAS fold CTC_RS09385 PF00072 Response regulator receiver domain CTC_RS09385 PF00486 Transcriptional regulatory protein, C terminal CTC_RS09390 PF12704 MacB-like periplasmic core domain CTC_RS09390 PF02687 FtsX-like permease family CTC_RS09390 PF00005 ABC transporter CTC_RS09395 PF00005 ABC transporter CTC_RS09415 PF03788 LrgA family CTC_RS09420 PF04172 LrgB-like family CTC_RS09425 PF00282 Pyridoxal-dependent decarboxylase conserved domain CTC_RS09450 PF01751 Toprim domain CTC_RS09450 PF01131 DNA topoisomerase CTC_RS09465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTC_RS09465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTC_RS09475 PF13411 MerR HTH family regulatory protein CTC_RS09475 PF06445 GyrI-like small molecule binding domain CTC_RS09480 PF00258 Flavodoxin CTC_RS09480 PF00301 Rubredoxin CTC_RS09480 PF00753 Metallo-beta-lactamase superfamily CTC_RS09485 PF03601 Conserved hypothetical protein 698 CTC_RS09500 PF00890 FAD binding domain CTC_RS09500 PF04205 FMN-binding domain CTC_RS09510 PF12833 Helix-turn-helix domain CTC_RS09510 PF00072 Response regulator receiver domain CTC_RS09515 PF00271 Helicase conserved C-terminal domain CTC_RS09515 PF00176 SNF2 family N-terminal domain CTC_RS09515 PF04434 SWIM zinc finger CTC_RS09520 PF01416 tRNA pseudouridine synthase CTC_RS09530 PF00999 Sodium/hydrogen exchanger family CTC_RS09530 PF03471 Transporter associated domain CTC_RS09530 PF02080 TrkA-C domain CTC_RS09540 PF06100 MCRA family CTC_RS09545 PF00270 DEAD/DEAH box helicase CTC_RS09545 PF00271 Helicase conserved C-terminal domain CTC_RS09550 PF00672 HAMP domain CTC_RS09550 PF02743 Cache domain CTC_RS09550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS09570 PF02632 BioY family CTC_RS09575 PF04199 Putative cyclase CTC_RS09580 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CTC_RS09580 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CTC_RS09585 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CTC_RS09585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CTC_RS09590 PF02789 Cytosol aminopeptidase family, N-terminal domain CTC_RS09590 PF00883 Cytosol aminopeptidase family, catalytic domain CTC_RS09595 PF05525 Branched-chain amino acid transport protein CTC_RS09610 PF04122 Putative cell wall binding repeat 2 CTC_RS09610 PF01520 N-acetylmuramoyl-L-alanine amidase CTC_RS09620 PF04405 Domain of Unknown function (DUF542) CTC_RS09620 PF01814 Hemerythrin HHE cation binding domain CTC_RS09625 PF00753 Metallo-beta-lactamase superfamily CTC_RS09625 PF00258 Flavodoxin CTC_RS09630 PF00027 Cyclic nucleotide-binding domain CTC_RS09630 PF13545 Crp-like helix-turn-helix domain CTC_RS09635 PF17763 Glutaminase/Asparaginase C-terminal domain CTC_RS09635 PF00710 Asparaginase, N-terminal CTC_RS09650 PF02625 XdhC and CoxI family CTC_RS09650 PF13478 XdhC Rossmann domain CTC_RS09655 PF12729 Four helix bundle sensory module for signal transduction CTC_RS09655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS09655 PF00672 HAMP domain CTC_RS09665 PF07969 Amidohydrolase family CTC_RS09670 PF02633 Creatinine amidohydrolase CTC_RS09675 PF00892 EamA-like transporter family CTC_RS09680 PF17853 GGDEF-like domain CTC_RS09680 PF13556 PucR C-terminal helix-turn-helix domain CTC_RS09690 PF17440 Thiol-activated cytolysin beta sandwich domain CTC_RS09690 PF01289 Thiol-activated cytolysin CTC_RS09700 PF00583 Acetyltransferase (GNAT) family CTC_RS09710 PF00005 ABC transporter CTC_RS09715 PF00392 Bacterial regulatory proteins, gntR family CTC_RS09720 PF01022 Bacterial regulatory protein, arsR family CTC_RS09725 PF06953 Arsenical resistance operon trans-acting repressor ArsD CTC_RS09730 PF02374 Anion-transporting ATPase CTC_RS09735 PF00753 Metallo-beta-lactamase superfamily CTC_RS09755 PF07687 Peptidase dimerisation domain CTC_RS09755 PF01546 Peptidase family M20/M25/M40 CTC_RS09760 PF07883 Cupin domain CTC_RS09765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTC_RS09770 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS09775 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS09775 PF12911 N-terminal TM domain of oligopeptide transport permease C CTC_RS09780 PF00005 ABC transporter CTC_RS09785 PF00005 ABC transporter CTC_RS09790 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS09795 PF00072 Response regulator receiver domain CTC_RS09795 PF00486 Transcriptional regulatory protein, C terminal CTC_RS09815 PF01272 Transcription elongation factor, GreA/GreB, C-term CTC_RS09815 PF03449 Transcription elongation factor, N-terminal CTC_RS09825 PF00293 NUDIX domain CTC_RS09830 PF08463 EcoEI R protein C-terminal CTC_RS09830 PF00271 Helicase conserved C-terminal domain CTC_RS09830 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CTC_RS09830 PF04851 Type III restriction enzyme, res subunit CTC_RS09835 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CTC_RS09855 PF00005 ABC transporter CTC_RS09860 PF00672 HAMP domain CTC_RS09860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS09860 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS09865 PF00072 Response regulator receiver domain CTC_RS09865 PF00486 Transcriptional regulatory protein, C terminal CTC_RS09895 PF13419 Haloacid dehalogenase-like hydrolase CTC_RS09900 PF04072 Leucine carboxyl methyltransferase CTC_RS09920 PF01555 DNA methylase CTC_RS09955 PF17762 HTH domain found in ParB protein CTC_RS09955 PF02195 ParB-like nuclease domain CTC_RS09960 PF13614 AAA domain CTC_RS09985 PF05958 tRNA (Uracil-5-)-methyltransferase CTC_RS09995 PF00884 Sulfatase CTC_RS10000 PF01925 Sulfite exporter TauE/SafE CTC_RS10005 PF01546 Peptidase family M20/M25/M40 CTC_RS10010 PF00753 Metallo-beta-lactamase superfamily CTC_RS10010 PF16123 Hydroxyacylglutathione hydrolase C-terminus CTC_RS10030 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS10030 PF00989 PAS fold CTC_RS10030 PF16736 Single Cache-like CTC_RS10030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS10035 PF00072 Response regulator receiver domain CTC_RS10035 PF00486 Transcriptional regulatory protein, C terminal CTC_RS10040 PF00403 Heavy-metal-associated domain CTC_RS10045 PF08439 Oligopeptidase F CTC_RS10045 PF01432 Peptidase family M3 CTC_RS10050 PF03129 Anticodon binding domain CTC_RS10050 PF13393 Histidyl-tRNA synthetase CTC_RS10065 PF02843 Phosphoribosylglycinamide synthetase, C domain CTC_RS10065 PF02844 Phosphoribosylglycinamide synthetase, N domain CTC_RS10065 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CTC_RS10070 PF02142 MGS-like domain CTC_RS10070 PF01808 AICARFT/IMPCHase bienzyme CTC_RS10075 PF00551 Formyl transferase CTC_RS10080 PF00586 AIR synthase related protein, N-terminal domain CTC_RS10080 PF02769 AIR synthase related protein, C-terminal domain CTC_RS10085 PF00156 Phosphoribosyl transferase domain CTC_RS10090 PF00731 AIR carboxylase CTC_RS10130 PF00860 Permease family CTC_RS10135 PF01235 Sodium:alanine symporter family CTC_RS10145 PF02554 Carbon starvation protein CstA CTC_RS10150 PF13492 GAF domain CTC_RS10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS10150 PF06580 Histidine kinase CTC_RS10150 PF07694 5TMR of 5TMR-LYT CTC_RS10155 PF00072 Response regulator receiver domain CTC_RS10155 PF04397 LytTr DNA-binding domain CTC_RS10165 PF03315 Serine dehydratase beta chain CTC_RS10170 PF03313 Serine dehydratase alpha chain CTC_RS10175 PF00990 Diguanylate cyclase, GGDEF domain CTC_RS10180 PF00392 Bacterial regulatory proteins, gntR family CTC_RS10185 PF00005 ABC transporter CTC_RS10195 PF00005 ABC transporter CTC_RS10210 PF00665 Integrase core domain CTC_RS10210 PF13333 Integrase core domain CTC_RS10210 PF13276 HTH-like domain CTC_RS10215 PF00149 Calcineurin-like phosphoesterase CTC_RS10215 PF02872 5'-nucleotidase, C-terminal domain CTC_RS10225 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CTC_RS10225 PF02885 Glycosyl transferase family, helical bundle domain CTC_RS10225 PF00591 Glycosyl transferase family, a/b domain CTC_RS10230 PF01791 DeoC/LacD family aldolase CTC_RS10235 PF02872 5'-nucleotidase, C-terminal domain CTC_RS10235 PF00149 Calcineurin-like phosphoesterase CTC_RS10235 PF00565 Staphylococcal nuclease homologue CTC_RS10235 PF00746 LPXTG cell wall anchor motif CTC_RS10245 PF00230 Major intrinsic protein CTC_RS10250 PF02073 Thermophilic metalloprotease (M29) CTC_RS10255 PF00056 lactate/malate dehydrogenase, NAD binding domain CTC_RS10255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CTC_RS10265 PF00271 Helicase conserved C-terminal domain CTC_RS10265 PF00270 DEAD/DEAH box helicase CTC_RS10270 PF00654 Voltage gated chloride channel CTC_RS10275 PF02645 Uncharacterised protein, DegV family COG1307 CTC_RS10285 PF06081 Aromatic acid exporter family member 1 CTC_RS10285 PF11728 Putative aromatic acid exporter C-terminal domain CTC_RS10295 PF01784 NIF3 (NGG1p interacting factor 3) CTC_RS10305 PF10882 Bacterial PH domain CTC_RS10310 PF04545 Sigma-70, region 4 CTC_RS10310 PF03979 Sigma-70 factor, region 1.1 CTC_RS10310 PF00140 Sigma-70 factor, region 1.2 CTC_RS10310 PF04539 Sigma-70 region 3 CTC_RS10310 PF04542 Sigma-70 region 2 CTC_RS10315 PF10410 DnaB-helicase binding domain of primase CTC_RS10315 PF08275 DNA primase catalytic core, N-terminal domain CTC_RS10315 PF01807 CHC2 zinc finger CTC_RS10320 PF13286 Phosphohydrolase-associated domain CTC_RS10320 PF01966 HD domain CTC_RS10330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CTC_RS10330 PF02896 PEP-utilising enzyme, TIM barrel domain CTC_RS10330 PF00391 PEP-utilising enzyme, mobile domain CTC_RS10335 PF00571 CBS domain CTC_RS10335 PF08279 HTH domain CTC_RS10345 PF02565 Recombination protein O C terminal CTC_RS10345 PF11967 Recombination protein O N terminal CTC_RS10350 PF07650 KH domain CTC_RS10350 PF01926 50S ribosome-binding GTPase CTC_RS10355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CTC_RS10365 PF02130 Uncharacterized protein family UPF0054 CTC_RS10370 PF01966 HD domain CTC_RS10370 PF07697 7TM-HD extracellular CTC_RS10370 PF07698 7TM receptor with intracellular HD hydrolase CTC_RS10375 PF06898 Putative stage IV sporulation protein YqfD CTC_RS10380 PF07873 YabP family CTC_RS10390 PF01165 Ribosomal protein S21 CTC_RS10395 PF01230 HIT domain CTC_RS10400 PF04055 Radical SAM superfamily CTC_RS10400 PF00919 Uncharacterized protein family UPF0004 CTC_RS10400 PF01938 TRAM domain CTC_RS10405 PF04452 RNA methyltransferase CTC_RS10415 PF00684 DnaJ central domain CTC_RS10415 PF00226 DnaJ domain CTC_RS10415 PF01556 DnaJ C terminal domain CTC_RS10420 PF00012 Hsp70 protein CTC_RS10425 PF01025 GrpE CTC_RS10430 PF01628 HrcA protein C terminal domain CTC_RS10435 PF06969 HemN C-terminal domain CTC_RS10435 PF04055 Radical SAM superfamily CTC_RS10440 PF00679 Elongation factor G C-terminus CTC_RS10440 PF00009 Elongation factor Tu GTP binding domain CTC_RS10440 PF03144 Elongation factor Tu domain 2 CTC_RS10440 PF06421 GTP-binding protein LepA C-terminus CTC_RS10460 PF03418 Germination protease CTC_RS10465 PF01649 Ribosomal protein S20 CTC_RS10480 PF00690 Cation transporter/ATPase, N-terminus CTC_RS10480 PF00689 Cation transporting ATPase, C-terminus CTC_RS10485 PF04456 Protein of unknown function (DUF503) CTC_RS10495 PF10437 Bacterial lipoate protein ligase C-terminus CTC_RS10495 PF03099 Biotin/lipoate A/B protein ligase family CTC_RS10500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CTC_RS10500 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTC_RS10505 PF01047 MarR family CTC_RS10520 PF07943 Penicillin-binding protein 5, C-terminal domain CTC_RS10520 PF00768 D-alanyl-D-alanine carboxypeptidase CTC_RS10525 PF01479 S4 domain CTC_RS10525 PF00849 RNA pseudouridylate synthase CTC_RS10530 PF03816 Cell envelope-related transcriptional attenuator domain CTC_RS10535 PF01966 HD domain CTC_RS10540 PF01467 Cytidylyltransferase-like CTC_RS10545 PF01985 CRS1 / YhbY (CRM) domain CTC_RS10550 PF09269 Domain of unknown function (DUF1967) CTC_RS10550 PF01018 GTP1/OBG CTC_RS10550 PF01926 50S ribosome-binding GTPase CTC_RS10560 PF01016 Ribosomal L27 protein CTC_RS10570 PF00829 Ribosomal prokaryotic L21 protein CTC_RS10575 PF00575 S1 RNA binding domain CTC_RS10575 PF10150 Ribonuclease E/G family CTC_RS10590 PF02163 Peptidase family M50 CTC_RS10595 PF01551 Peptidase family M23 CTC_RS10595 PF08525 Opacity-associated protein A N-terminal motif CTC_RS10595 PF01476 LysM domain CTC_RS10600 PF01098 Cell cycle protein CTC_RS10605 PF03776 Septum formation topological specificity factor MinE CTC_RS10610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CTC_RS10615 PF03775 Septum formation inhibitor MinC, C-terminal domain CTC_RS10620 PF03717 Penicillin-binding Protein dimerisation domain CTC_RS10620 PF05223 NTF2-like N-terminal transpeptidase domain CTC_RS10620 PF00905 Penicillin binding protein transpeptidase domain CTC_RS10630 PF04085 rod shape-determining protein MreC CTC_RS10640 PF04002 RadC-like JAB domain CTC_RS10645 PF02545 Maf-like protein CTC_RS10655 PF08239 Bacterial SH3 domain CTC_RS10655 PF00877 NlpC/P60 family CTC_RS10655 PF01476 LysM domain CTC_RS10670 PF02770 Acyl-CoA dehydrogenase, middle domain CTC_RS10670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTC_RS10670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTC_RS10675 PF00766 Electron transfer flavoprotein FAD-binding domain CTC_RS10675 PF01012 Electron transfer flavoprotein domain CTC_RS10680 PF01012 Electron transfer flavoprotein domain CTC_RS10685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTC_RS10685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTC_RS10685 PF02770 Acyl-CoA dehydrogenase, middle domain CTC_RS10700 PF02515 CoA-transferase family III CTC_RS10705 PF05525 Branched-chain amino acid transport protein CTC_RS10715 PF00570 HRDC domain CTC_RS10715 PF00270 DEAD/DEAH box helicase CTC_RS10715 PF00271 Helicase conserved C-terminal domain CTC_RS10715 PF09382 RQC domain CTC_RS10715 PF16124 RecQ zinc-binding CTC_RS10720 PF02632 BioY family CTC_RS10725 PF01520 N-acetylmuramoyl-L-alanine amidase CTC_RS10725 PF05036 Sporulation related domain CTC_RS10750 PF03323 Bacillus/Clostridium GerA spore germination protein CTC_RS10760 PF12704 MacB-like periplasmic core domain CTC_RS10760 PF02687 FtsX-like permease family CTC_RS10760 PF00005 ABC transporter CTC_RS10780 PF01121 Dephospho-CoA kinase CTC_RS10785 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CTC_RS10785 PF00476 DNA polymerase family A CTC_RS10785 PF01367 5'-3' exonuclease, C-terminal SAM fold CTC_RS10790 PF01264 Chorismate synthase CTC_RS10820 PF01381 Helix-turn-helix CTC_RS10885 PF04865 Baseplate J-like protein CTC_RS10965 PF00574 Clp protease CTC_RS10995 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CTC_RS11055 PF03837 RecT family CTC_RS11060 PF09588 YqaJ-like viral recombinase domain CTC_RS11095 PF01381 Helix-turn-helix CTC_RS11100 PF00239 Resolvase, N terminal domain CTC_RS11100 PF02796 Helix-turn-helix domain of resolvase CTC_RS11105 PF00075 RNase H CTC_RS11110 PF05190 MutS family domain IV CTC_RS11110 PF01624 MutS domain I CTC_RS11110 PF05192 MutS domain III CTC_RS11110 PF05188 MutS domain II CTC_RS11110 PF00488 MutS domain V CTC_RS11115 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS11115 PF13426 PAS domain CTC_RS11115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS11115 PF00672 HAMP domain CTC_RS11120 PF00486 Transcriptional regulatory protein, C terminal CTC_RS11120 PF00072 Response regulator receiver domain CTC_RS11130 PF00933 Glycosyl hydrolase family 3 N terminal domain CTC_RS11130 PF01915 Glycosyl hydrolase family 3 C-terminal domain CTC_RS11140 PF14268 YoaP-like CTC_RS11140 PF00583 Acetyltransferase (GNAT) family CTC_RS11145 PF00582 Universal stress protein family CTC_RS11145 PF00999 Sodium/hydrogen exchanger family CTC_RS11165 PF06249 Ethanolamine utilisation protein EutQ CTC_RS11170 PF04346 Ethanolamine utilisation protein, EutH CTC_RS11180 PF03319 Ethanolamine utilisation protein EutN/carboxysome CTC_RS11195 PF06130 Phosphate propanoyltransferase CTC_RS11205 PF00936 BMC domain CTC_RS11210 PF00465 Iron-containing alcohol dehydrogenase CTC_RS11210 PF00171 Aldehyde dehydrogenase family CTC_RS11220 PF00936 BMC domain CTC_RS11225 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CTC_RS11230 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CTC_RS11235 PF06277 Ethanolamine utilisation protein EutA CTC_RS11240 PF12282 Signal transduction histidine kinase CTC_RS11240 PF07568 Histidine kinase CTC_RS11240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS11245 PF03861 ANTAR domain CTC_RS11245 PF00072 Response regulator receiver domain CTC_RS11250 PF10662 Ethanolamine utilisation - propanediol utilisation CTC_RS11255 PF00936 BMC domain CTC_RS11260 PF00465 Iron-containing alcohol dehydrogenase CTC_RS11265 PF12697 Alpha/beta hydrolase family CTC_RS11270 PF00271 Helicase conserved C-terminal domain CTC_RS11270 PF00270 DEAD/DEAH box helicase CTC_RS11275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CTC_RS11280 PF01810 LysE type translocator CTC_RS11290 PF01209 ubiE/COQ5 methyltransferase family CTC_RS11300 PF00753 Metallo-beta-lactamase superfamily CTC_RS11310 PF05525 Branched-chain amino acid transport protein CTC_RS11315 PF01336 OB-fold nucleic acid binding domain CTC_RS11315 PF02938 GAD domain CTC_RS11315 PF00152 tRNA synthetases class II (D, K and N) CTC_RS11320 PF04055 Radical SAM superfamily CTC_RS11325 PF00753 Metallo-beta-lactamase superfamily CTC_RS11330 PF02580 D-Tyr-tRNA(Tyr) deacylase CTC_RS11335 PF13291 ACT domain CTC_RS11335 PF02824 TGS domain CTC_RS11335 PF04607 Region found in RelA / SpoT proteins CTC_RS11340 PF00156 Phosphoribosyl transferase domain CTC_RS11350 PF07549 SecD/SecF GG Motif CTC_RS11350 PF02355 Protein export membrane protein CTC_RS11355 PF02355 Protein export membrane protein CTC_RS11355 PF07549 SecD/SecF GG Motif CTC_RS11375 PF02699 Preprotein translocase subunit CTC_RS11380 PF01702 Queuine tRNA-ribosyltransferase CTC_RS11385 PF02547 Queuosine biosynthesis protein CTC_RS11390 PF17864 RuvB AAA lid domain CTC_RS11390 PF05491 RuvB C-terminal winged helix domain CTC_RS11390 PF05496 Holliday junction DNA helicase RuvB P-loop domain CTC_RS11395 PF07499 RuvA, C-terminal domain CTC_RS11395 PF01330 RuvA N terminal domain CTC_RS11405 PF01709 Transcriptional regulator CTC_RS11410 PF09186 Domain of unknown function (DUF1949) CTC_RS11410 PF01205 Uncharacterized protein family UPF0029 CTC_RS11435 PF00364 Biotin-requiring enzyme CTC_RS11435 PF00289 Biotin carboxylase, N-terminal domain CTC_RS11435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTC_RS11435 PF02785 Biotin carboxylase C-terminal domain CTC_RS11435 PF02436 Conserved carboxylase domain CTC_RS11435 PF00682 HMGL-like CTC_RS11440 PF01979 Amidohydrolase family CTC_RS11445 PF01926 50S ribosome-binding GTPase CTC_RS11445 PF13167 GTP-binding GTPase N-terminal CTC_RS11445 PF16360 GTP-binding GTPase Middle Region CTC_RS11450 PF02342 TerD domain CTC_RS11460 PF14266 Putative component of 'biosynthetic module' CTC_RS11465 PF05816 Toxic anion resistance protein (TelA) CTC_RS11470 PF02342 TerD domain CTC_RS11475 PF02342 TerD domain CTC_RS11480 PF02342 TerD domain CTC_RS11510 PF00156 Phosphoribosyl transferase domain CTC_RS11520 PF00905 Penicillin binding protein transpeptidase domain CTC_RS11520 PF00912 Transglycosylase CTC_RS11525 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CTC_RS11530 PF07451 Stage V sporulation protein AD (SpoVAD) CTC_RS11535 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CTC_RS11540 PF04542 Sigma-70 region 2 CTC_RS11540 PF04539 Sigma-70 region 3 CTC_RS11540 PF04545 Sigma-70, region 4 CTC_RS11545 PF13581 Histidine kinase-like ATPase domain CTC_RS11550 PF01740 STAS domain CTC_RS11555 PF17284 Spermidine synthase tetramerisation domain CTC_RS11565 PF01522 Polysaccharide deacetylase CTC_RS11570 PF03808 Glycosyl transferase WecB/TagA/CpsF family CTC_RS11575 PF02397 Bacterial sugar transferase CTC_RS11585 PF03023 Lipid II flippase MurJ CTC_RS11610 PF13416 Bacterial extracellular solute-binding protein CTC_RS11615 PF03023 Lipid II flippase MurJ CTC_RS11630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CTC_RS11630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTC_RS11635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CTC_RS11635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CTC_RS11635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CTC_RS11640 PF13439 Glycosyltransferase Family 4 CTC_RS11645 PF02719 Polysaccharide biosynthesis protein CTC_RS11650 PF00483 Nucleotidyl transferase CTC_RS11660 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CTC_RS11660 PF01276 Orn/Lys/Arg decarboxylase, major domain CTC_RS11665 PF04463 Protein of unknown function (DUF523) CTC_RS11670 PF00488 MutS domain V CTC_RS11670 PF01713 Smr domain CTC_RS11675 PF12392 Collagenase CTC_RS11675 PF01136 Peptidase family U32 CTC_RS11680 PF05164 Cell division protein ZapA CTC_RS11685 PF03147 Ferredoxin-fold anticodon binding domain CTC_RS11685 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CTC_RS11685 PF01588 Putative tRNA binding domain CTC_RS11685 PF03484 tRNA synthetase B5 domain CTC_RS11685 PF03483 B3/4 domain CTC_RS11690 PF01409 tRNA synthetases class II core domain (F) CTC_RS11690 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CTC_RS11695 PF08032 RNA 2'-O ribose methyltransferase substrate binding CTC_RS11695 PF00588 SpoU rRNA Methylase family CTC_RS11700 PF02254 TrkA-N domain CTC_RS11700 PF02080 TrkA-C domain CTC_RS11705 PF02386 Cation transport protein CTC_RS11710 PF00453 Ribosomal protein L20 CTC_RS11715 PF01632 Ribosomal protein L35 CTC_RS11720 PF05198 Translation initiation factor IF-3, N-terminal domain CTC_RS11720 PF00707 Translation initiation factor IF-3, C-terminal domain CTC_RS11725 PF02824 TGS domain CTC_RS11725 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CTC_RS11725 PF03129 Anticodon binding domain CTC_RS11725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTC_RS11755 PF02277 Phosphoribosyltransferase CTC_RS11760 PF01430 Hsp33 protein CTC_RS11765 PF13847 Methyltransferase domain CTC_RS11775 PF02774 Semialdehyde dehydrogenase, dimerisation domain CTC_RS11775 PF01118 Semialdehyde dehydrogenase, NAD binding domain CTC_RS11780 PF00701 Dihydrodipicolinate synthetase family CTC_RS11785 PF05173 Dihydrodipicolinate reductase, C-terminus CTC_RS11785 PF01113 Dihydrodipicolinate reductase, N-terminus CTC_RS11800 PF01522 Polysaccharide deacetylase CTC_RS11820 PF08245 Mur ligase middle domain CTC_RS11820 PF02875 Mur ligase family, glutamate ligase domain CTC_RS11825 PF10458 Valyl tRNA synthetase tRNA binding arm CTC_RS11825 PF00133 tRNA synthetases class I (I, L, M and V) CTC_RS11825 PF08264 Anticodon-binding domain of tRNA CTC_RS11835 PF01268 Formate--tetrahydrofolate ligase CTC_RS11840 PF02971 Formiminotransferase domain CTC_RS11840 PF07837 Formiminotransferase domain, N-terminal subdomain CTC_RS11845 PF03616 Sodium/glutamate symporter CTC_RS11855 PF03313 Serine dehydratase alpha chain CTC_RS11860 PF03553 Na+/H+ antiporter family CTC_RS11860 PF13726 Na+-H+ antiporter family CTC_RS11865 PF13726 Na+-H+ antiporter family CTC_RS11865 PF03553 Na+/H+ antiporter family CTC_RS11875 PF06738 Putative threonine/serine exporter CTC_RS11885 PF03806 AbgT putative transporter family CTC_RS11890 PF01546 Peptidase family M20/M25/M40 CTC_RS11890 PF07687 Peptidase dimerisation domain CTC_RS11895 PF00221 Aromatic amino acid lyase CTC_RS11905 PF01979 Amidohydrolase family CTC_RS11910 PF17391 Urocanase N-terminal domain CTC_RS11910 PF17392 Urocanase C-terminal domain CTC_RS11910 PF01175 Urocanase Rossmann-like domain CTC_RS11915 PF00158 Sigma-54 interaction domain CTC_RS11915 PF00072 Response regulator receiver domain CTC_RS11915 PF02954 Bacterial regulatory protein, Fis family CTC_RS11920 PF00512 His Kinase A (phospho-acceptor) domain CTC_RS11920 PF00989 PAS fold CTC_RS11920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS11925 PF03616 Sodium/glutamate symporter CTC_RS11930 PF01869 BadF/BadG/BcrA/BcrD ATPase family CTC_RS11935 PF01813 ATP synthase subunit D CTC_RS11940 PF02874 ATP synthase alpha/beta family, beta-barrel domain CTC_RS11940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTC_RS11945 PF02874 ATP synthase alpha/beta family, beta-barrel domain CTC_RS11945 PF16886 ATPsynthase alpha/beta subunit N-term extension CTC_RS11945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTC_RS11950 PF01991 ATP synthase (E/31 kDa) subunit CTC_RS11960 PF00137 ATP synthase subunit C CTC_RS11965 PF01496 V-type ATPase 116kDa subunit family CTC_RS11995 PF02631 RecX family CTC_RS12000 PF05193 Peptidase M16 inactive domain CTC_RS12000 PF00675 Insulinase (Peptidase family M16) CTC_RS12010 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CTC_RS12015 PF00528 Binding-protein-dependent transport system inner membrane component CTC_RS12020 PF00571 CBS domain CTC_RS12020 PF00005 ABC transporter CTC_RS12030 PF00082 Subtilase family CTC_RS12035 PF00356 Bacterial regulatory proteins, lacI family CTC_RS12040 PF13407 Periplasmic binding protein domain CTC_RS12045 PF02653 Branched-chain amino acid transport system / permease component CTC_RS12050 PF00005 ABC transporter CTC_RS12055 PF05025 RbsD / FucU transport protein family CTC_RS12060 PF00294 pfkB family carbohydrate kinase CTC_RS12065 PF00188 Cysteine-rich secretory protein family CTC_RS12075 PF03447 Homoserine dehydrogenase, NAD binding domain CTC_RS12075 PF00742 Homoserine dehydrogenase CTC_RS12075 PF01842 ACT domain CTC_RS12080 PF00696 Amino acid kinase family CTC_RS12080 PF13840 ACT domain CTC_RS12085 PF08544 GHMP kinases C terminal CTC_RS12085 PF00288 GHMP kinases N terminal domain CTC_RS12090 PF00291 Pyridoxal-phosphate dependent enzyme CTC_RS12105 PF01297 Zinc-uptake complex component A periplasmic CTC_RS12105 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CTC_RS12110 PF00005 ABC transporter CTC_RS12115 PF00950 ABC 3 transport family CTC_RS12120 PF01475 Ferric uptake regulator family CTC_RS12140 PF02517 CPBP intramembrane metalloprotease CTC_RS12145 PF01926 50S ribosome-binding GTPase CTC_RS12150 PF02190 ATP-dependent protease La (LON) substrate-binding domain CTC_RS12150 PF05362 Lon protease (S16) C-terminal proteolytic domain CTC_RS12150 PF00004 ATPase family associated with various cellular activities (AAA) CTC_RS12155 PF05362 Lon protease (S16) C-terminal proteolytic domain CTC_RS12155 PF00004 ATPase family associated with various cellular activities (AAA) CTC_RS12160 PF10431 C-terminal, D2-small domain, of ClpB protein CTC_RS12160 PF06689 ClpX C4-type zinc finger CTC_RS12160 PF07724 AAA domain (Cdc48 subfamily) CTC_RS12165 PF00574 Clp protease CTC_RS12170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTC_RS12170 PF05697 Bacterial trigger factor protein (TF) CTC_RS12170 PF05698 Bacterial trigger factor protein (TF) C-terminus CTC_RS12180 PF00156 Phosphoribosyl transferase domain CTC_RS12185 PF01180 Dihydroorotate dehydrogenase CTC_RS12190 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CTC_RS12195 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CTC_RS12200 PF01979 Amidohydrolase family CTC_RS12205 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CTC_RS12205 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CTC_RS12210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CTC_RS12210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CTC_RS12215 PF00156 Phosphoribosyl transferase domain CTC_RS12280 PF01725 Ham1 family CTC_RS12295 PF02934 GatB/GatE catalytic domain CTC_RS12295 PF02637 GatB domain CTC_RS12300 PF01425 Amidase CTC_RS12305 PF02686 Glu-tRNAGln amidotransferase C subunit CTC_RS12315 PF00533 BRCA1 C Terminus (BRCT) domain CTC_RS12315 PF01653 NAD-dependent DNA ligase adenylation domain CTC_RS12315 PF03120 NAD-dependent DNA ligase OB-fold domain CTC_RS12315 PF12826 Helix-hairpin-helix motif CTC_RS12320 PF00580 UvrD/REP helicase N-terminal domain CTC_RS12320 PF13361 UvrD-like helicase C-terminal domain CTC_RS12325 PF07687 Peptidase dimerisation domain CTC_RS12325 PF01546 Peptidase family M20/M25/M40 CTC_RS12330 PF07687 Peptidase dimerisation domain CTC_RS12330 PF01546 Peptidase family M20/M25/M40 CTC_RS12335 PF01371 Trp repressor protein CTC_RS12340 PF01479 S4 domain CTC_RS12340 PF00849 RNA pseudouridylate synthase CTC_RS12345 PF01464 Transglycosylase SLT domain CTC_RS12355 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CTC_RS12360 PF00342 Phosphoglucose isomerase CTC_RS12365 PF01554 MatE CTC_RS12385 PF00589 Phage integrase family CTC_RS12385 PF14659 Phage integrase, N-terminal SAM-like domain CTC_RS12390 PF00117 Glutamine amidotransferase class-I CTC_RS12390 PF02540 NAD synthase CTC_RS12390 PF00958 GMP synthase C terminal domain CTC_RS12395 PF00478 IMP dehydrogenase / GMP reductase domain CTC_RS12395 PF00571 CBS domain CTC_RS12400 PF06750 Bacterial Peptidase A24 N-terminal domain CTC_RS12400 PF01478 Type IV leader peptidase family CTC_RS12405 PF00118 TCP-1/cpn60 chaperonin family CTC_RS12410 PF00166 Chaperonin 10 Kd subunit CTC_RS12435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTC_RS12435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CTC_RS12435 PF13247 4Fe-4S dicluster domain CTC_RS12440 PF00175 Oxidoreductase NAD-binding domain CTC_RS12440 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CTC_RS12445 PF00465 Iron-containing alcohol dehydrogenase CTC_RS12450 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CTC_RS12450 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CTC_RS12455 PF01012 Electron transfer flavoprotein domain CTC_RS12455 PF00766 Electron transfer flavoprotein FAD-binding domain CTC_RS12460 PF01012 Electron transfer flavoprotein domain CTC_RS12465 PF02770 Acyl-CoA dehydrogenase, middle domain CTC_RS12465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTC_RS12465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTC_RS12470 PF00378 Enoyl-CoA hydratase/isomerase CTC_RS12475 PF06971 Putative DNA-binding protein N-terminus CTC_RS12475 PF02629 CoA binding domain CTC_RS12480 PF00005 ABC transporter CTC_RS12480 PF12848 ABC transporter CTC_RS12480 PF16326 ABC transporter C-terminal domain CTC_RS12485 PF00892 EamA-like transporter family CTC_RS12490 PF03807 NADP oxidoreductase coenzyme F420-dependent CTC_RS12490 PF14748 Pyrroline-5-carboxylate reductase dimerisation CTC_RS12495 PF00814 Glycoprotease family CTC_RS12510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTC_RS12510 PF04324 BFD-like [2Fe-2S] binding domain CTC_RS12515 PF01266 FAD dependent oxidoreductase CTC_RS12550 PF01297 Zinc-uptake complex component A periplasmic CTC_RS12555 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CTC_RS12560 PF00814 Glycoprotease family CTC_RS12565 PF00583 Acetyltransferase (GNAT) family CTC_RS12570 PF01479 S4 domain CTC_RS12570 PF00579 tRNA synthetases class I (W and Y) CTC_RS12585 PF03323 Bacillus/Clostridium GerA spore germination protein CTC_RS12600 PF00009 Elongation factor Tu GTP binding domain CTC_RS12600 PF03144 Elongation factor Tu domain 2 CTC_RS12600 PF16658 Class II release factor RF3, C-terminal domain CTC_RS12610 PF00579 tRNA synthetases class I (W and Y) CTC_RS12615 PF06397 Desulfoferrodoxin, N-terminal domain CTC_RS12615 PF01880 Desulfoferrodoxin CTC_RS12625 PF10091 Putative glucoamylase CTC_RS12625 PF06165 Glycosyltransferase family 36 CTC_RS12625 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CTC_RS12630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CTC_RS12630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CTC_RS12635 PF02127 Aminopeptidase I zinc metalloprotease (M18) CTC_RS12640 PF16916 Dimerisation domain of Zinc Transporter CTC_RS12640 PF01545 Cation efflux family CTC_RS12650 PF13538 UvrD-like helicase C-terminal domain CTC_RS12655 PF06480 FtsH Extracellular CTC_RS12655 PF00004 ATPase family associated with various cellular activities (AAA) CTC_RS12655 PF01434 Peptidase family M41 CTC_RS12655 PF17862 AAA+ lid domain CTC_RS12660 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CTC_RS12660 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CTC_RS12665 PF03949 Malic enzyme, NAD binding domain CTC_RS12665 PF00390 Malic enzyme, N-terminal domain CTC_RS12675 PF03606 C4-dicarboxylate anaerobic carrier CTC_RS12680 PF04223 Citrate lyase, alpha subunit (CitF) CTC_RS12685 PF03328 HpcH/HpaI aldolase/citrate lyase family CTC_RS12690 PF06857 Malonate decarboxylase delta subunit (MdcD) CTC_RS12695 PF00392 Bacterial regulatory proteins, gntR family CTC_RS12695 PF07729 FCD domain CTC_RS12700 PF00011 Hsp20/alpha crystallin family CTC_RS12710 PF08359 YsiA-like protein, C-terminal region CTC_RS12710 PF00440 Bacterial regulatory proteins, tetR family CTC_RS12715 PF12804 MobA-like NTP transferase domain CTC_RS12725 PF01799 [2Fe-2S] binding domain CTC_RS12725 PF00111 2Fe-2S iron-sulfur cluster binding domain CTC_RS12735 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CTC_RS12735 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CTC_RS12760 PF05958 tRNA (Uracil-5-)-methyltransferase CTC_RS12760 PF01938 TRAM domain CTC_RS12765 PF04474 Protein of unknown function (DUF554) CTC_RS12770 PF13187 4Fe-4S dicluster domain CTC_RS12770 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CTC_RS12770 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CTC_RS12775 PF00175 Oxidoreductase NAD-binding domain CTC_RS12775 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CTC_RS12780 PF17179 4Fe-4S dicluster domain CTC_RS12785 PF01226 Formate/nitrite transporter CTC_RS12795 PF00224 Pyruvate kinase, barrel domain CTC_RS12795 PF02887 Pyruvate kinase, alpha/beta domain CTC_RS12800 PF00365 Phosphofructokinase CTC_RS12805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CTC_RS12805 PF14579 Helix-hairpin-helix motif CTC_RS12805 PF07733 Bacterial DNA polymerase III alpha NTPase domain CTC_RS12805 PF02811 PHP domain CTC_RS12805 PF01336 OB-fold nucleic acid binding domain CTC_RS12810 PF07085 DRTGG domain CTC_RS12810 PF00392 Bacterial regulatory proteins, gntR family CTC_RS12810 PF00571 CBS domain CTC_RS12810 PF03061 Thioesterase superfamily CTC_RS12815 PF02650 WhiA C-terminal HTH domain CTC_RS12815 PF14527 WhiA LAGLIDADG-like domain CTC_RS12815 PF10298 WhiA N-terminal LAGLIDADG-like domain CTC_RS12820 PF01933 Uncharacterised protein family UPF0052 CTC_RS12825 PF03668 P-loop ATPase protein family CTC_RS12830 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CTC_RS12830 PF01565 FAD binding domain CTC_RS12835 PF01541 GIY-YIG catalytic domain CTC_RS12835 PF08459 UvrC Helix-hairpin-helix N-terminal CTC_RS12835 PF12826 Helix-hairpin-helix motif CTC_RS12835 PF02151 UvrB/uvrC motif CTC_RS12850 PF00905 Penicillin binding protein transpeptidase domain CTC_RS12855 PF01098 Cell cycle protein CTC_RS12865 PF17760 UvrA interaction domain CTC_RS12865 PF17755 UvrA DNA-binding domain CTC_RS12870 PF17757 UvrB interaction domain CTC_RS12870 PF02151 UvrB/uvrC motif CTC_RS12870 PF12344 Ultra-violet resistance protein B CTC_RS12870 PF04851 Type III restriction enzyme, res subunit CTC_RS12870 PF00271 Helicase conserved C-terminal domain CTC_RS12875 PF13180 PDZ domain CTC_RS12880 PF03572 Peptidase family S41 CTC_RS12880 PF01471 Putative peptidoglycan binding domain CTC_RS12880 PF17820 PDZ domain CTC_RS12885 PF18075 FtsX extracellular domain CTC_RS12885 PF02687 FtsX-like permease family CTC_RS12890 PF00005 ABC transporter CTC_RS12895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CTC_RS12895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CTC_RS12900 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CTC_RS12905 PF01402 Ribbon-helix-helix protein, copG family CTC_RS12910 PF01168 Alanine racemase, N-terminal domain CTC_RS12910 PF00842 Alanine racemase, C-terminal domain CTC_RS12920 PF01256 Carbohydrate kinase CTC_RS12920 PF03853 YjeF-related protein N-terminus CTC_RS12925 PF01648 4'-phosphopantetheinyl transferase superfamily CTC_RS12945 PF04324 BFD-like [2Fe-2S] binding domain CTC_RS12945 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CTC_RS12945 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CTC_RS12945 PF18267 Rubredoxin NAD+ reductase C-terminal domain CTC_RS12945 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTC_RS12950 PF03631 Virulence factor BrkB CTC_RS12955 PF03477 ATP cone domain CTC_RS12960 PF00171 Aldehyde dehydrogenase family CTC_RS12965 PF00696 Amino acid kinase family CTC_RS12970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTC_RS12975 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CTC_RS12975 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CTC_RS12985 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CTC_RS12995 PF01053 Cys/Met metabolism PLP-dependent enzyme CTC_RS13000 PF02954 Bacterial regulatory protein, Fis family CTC_RS13000 PF13426 PAS domain CTC_RS13000 PF00158 Sigma-54 interaction domain CTC_RS13005 PF01113 Dihydrodipicolinate reductase, N-terminus CTC_RS13005 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain CTC_RS13025 PF02811 PHP domain CTC_RS13035 PF04055 Radical SAM superfamily CTC_RS13060 PF01380 SIS domain CTC_RS13065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTC_RS13065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTC_RS13065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTC_RS13065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTC_RS13070 PF00871 Acetokinase family CTC_RS13075 PF01515 Phosphate acetyl/butaryl transferase CTC_RS13090 PF02457 DisA bacterial checkpoint controller nucleotide-binding CTC_RS13100 PF07486 Cell Wall Hydrolase CTC_RS13100 PF01471 Putative peptidoglycan binding domain CTC_RS13105 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTC_RS13110 PF00085 Thioredoxin CTC_RS13120 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CTC_RS13130 PF08218 Citrate lyase ligase C-terminal domain CTC_RS13135 PF04223 Citrate lyase, alpha subunit (CitF) CTC_RS13140 PF03328 HpcH/HpaI aldolase/citrate lyase family CTC_RS13145 PF06857 Malonate decarboxylase delta subunit (MdcD) CTC_RS13155 PF05683 Fumarase C-terminus CTC_RS13155 PF05681 Fumarate hydratase (Fumerase) CTC_RS13160 PF05034 Methylaspartate ammonia-lyase N-terminus CTC_RS13160 PF07476 Methylaspartate ammonia-lyase C-terminus CTC_RS13165 PF06368 Methylaspartate mutase E chain (MutE) CTC_RS13170 PF13941 MutL protein CTC_RS13175 PF02310 B12 binding domain CTC_RS13185 PF01520 N-acetylmuramoyl-L-alanine amidase CTC_RS13185 PF11741 AMIN domain CTC_RS13190 PF00380 Ribosomal protein S9/S16 CTC_RS13195 PF00572 Ribosomal protein L13 CTC_RS13200 PF01416 tRNA pseudouridine synthase CTC_RS13205 PF02361 Cobalt transport protein CTC_RS13210 PF00005 ABC transporter CTC_RS13215 PF00005 ABC transporter CTC_RS13220 PF01196 Ribosomal protein L17 CTC_RS13225 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CTC_RS13225 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CTC_RS13225 PF01000 RNA polymerase Rpb3/RpoA insert domain CTC_RS13230 PF01479 S4 domain CTC_RS13230 PF00163 Ribosomal protein S4/S9 N-terminal domain CTC_RS13235 PF00411 Ribosomal protein S11 CTC_RS13240 PF00416 Ribosomal protein S13/S18 CTC_RS13245 PF00444 Ribosomal protein L36 CTC_RS13250 PF01176 Translation initiation factor 1A / IF-1 CTC_RS13260 PF00557 Metallopeptidase family M24 CTC_RS13265 PF05191 Adenylate kinase, active site lid CTC_RS13270 PF00344 SecY translocase CTC_RS13275 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CTC_RS13280 PF00327 Ribosomal protein L30p/L7e CTC_RS13285 PF00333 Ribosomal protein S5, N-terminal domain CTC_RS13285 PF03719 Ribosomal protein S5, C-terminal domain CTC_RS13290 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CTC_RS13295 PF00347 Ribosomal protein L6 CTC_RS13300 PF00410 Ribosomal protein S8 CTC_RS13305 PF00253 Ribosomal protein S14p/S29e CTC_RS13310 PF00673 ribosomal L5P family C-terminus CTC_RS13310 PF00281 Ribosomal protein L5 CTC_RS13315 PF00467 KOW motif CTC_RS13315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CTC_RS13320 PF00238 Ribosomal protein L14p/L23e CTC_RS13325 PF00366 Ribosomal protein S17 CTC_RS13330 PF00831 Ribosomal L29 protein CTC_RS13335 PF00252 Ribosomal protein L16p/L10e CTC_RS13340 PF00189 Ribosomal protein S3, C-terminal domain CTC_RS13340 PF07650 KH domain CTC_RS13345 PF00237 Ribosomal protein L22p/L17e CTC_RS13350 PF00203 Ribosomal protein S19 CTC_RS13355 PF00181 Ribosomal Proteins L2, RNA binding domain CTC_RS13355 PF03947 Ribosomal Proteins L2, C-terminal domain CTC_RS13360 PF00276 Ribosomal protein L23 CTC_RS13365 PF00573 Ribosomal protein L4/L1 family CTC_RS13370 PF00297 Ribosomal protein L3 CTC_RS13375 PF00338 Ribosomal protein S10p/S20e CTC_RS13380 PF00009 Elongation factor Tu GTP binding domain CTC_RS13380 PF03144 Elongation factor Tu domain 2 CTC_RS13380 PF03143 Elongation factor Tu C-terminal domain CTC_RS13385 PF00679 Elongation factor G C-terminus CTC_RS13385 PF14492 Elongation Factor G, domain II CTC_RS13385 PF03764 Elongation factor G, domain IV CTC_RS13385 PF00009 Elongation factor Tu GTP binding domain CTC_RS13385 PF03144 Elongation factor Tu domain 2 CTC_RS13390 PF00177 Ribosomal protein S7p/S5e CTC_RS13395 PF00164 Ribosomal protein S12/S23 CTC_RS13400 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CTC_RS13405 PF04997 RNA polymerase Rpb1, domain 1 CTC_RS13405 PF00623 RNA polymerase Rpb1, domain 2 CTC_RS13405 PF04998 RNA polymerase Rpb1, domain 5 CTC_RS13405 PF05000 RNA polymerase Rpb1, domain 4 CTC_RS13405 PF04983 RNA polymerase Rpb1, domain 3 CTC_RS13410 PF04560 RNA polymerase Rpb2, domain 7 CTC_RS13410 PF00562 RNA polymerase Rpb2, domain 6 CTC_RS13410 PF10385 RNA polymerase beta subunit external 1 domain CTC_RS13410 PF04565 RNA polymerase Rpb2, domain 3 CTC_RS13410 PF04563 RNA polymerase beta subunit CTC_RS13410 PF04561 RNA polymerase Rpb2, domain 2 CTC_RS13415 PF16320 Ribosomal protein L7/L12 dimerisation domain CTC_RS13415 PF00542 Ribosomal protein L7/L12 C-terminal domain CTC_RS13420 PF00466 Ribosomal protein L10 CTC_RS13425 PF00687 Ribosomal protein L1p/L10e family CTC_RS13430 PF00298 Ribosomal protein L11, RNA binding domain CTC_RS13430 PF03946 Ribosomal protein L11, N-terminal domain CTC_RS13435 PF00467 KOW motif CTC_RS13435 PF02357 Transcription termination factor nusG CTC_RS13440 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CTC_RS13445 PF00471 Ribosomal protein L33 CTC_RS13450 PF03143 Elongation factor Tu C-terminal domain CTC_RS13450 PF03144 Elongation factor Tu domain 2 CTC_RS13450 PF00009 Elongation factor Tu GTP binding domain CTC_RS13460 PF08281 Sigma-70, region 4 CTC_RS13460 PF04542 Sigma-70 region 2 CTC_RS13470 PF00588 SpoU rRNA Methylase family CTC_RS13470 PF08032 RNA 2'-O ribose methyltransferase substrate binding CTC_RS13475 PF02511 Thymidylate synthase complementing protein CTC_RS13480 PF00636 Ribonuclease III domain CTC_RS13485 PF09190 DALR domain CTC_RS13485 PF01406 tRNA synthetases class I (C) catalytic domain CTC_RS13490 PF13291 ACT domain CTC_RS13490 PF00291 Pyridoxal-phosphate dependent enzyme CTC_RS13495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTC_RS13495 PF04073 Aminoacyl-tRNA editing domain CTC_RS13495 PF03129 Anticodon binding domain CTC_RS13500 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTC_RS13515 PF02457 DisA bacterial checkpoint controller nucleotide-binding CTC_RS13515 PF10635 DisA bacterial checkpoint controller linker region CTC_RS13515 PF00633 Helix-hairpin-helix motif CTC_RS13520 PF18073 Rubredoxin metal binding domain CTC_RS13525 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CTC_RS13530 PF00004 ATPase family associated with various cellular activities (AAA) CTC_RS13530 PF07724 AAA domain (Cdc48 subfamily) CTC_RS13530 PF10431 C-terminal, D2-small domain, of ClpB protein CTC_RS13530 PF17871 AAA lid domain CTC_RS13530 PF02861 Clp amino terminal domain, pathogenicity island component CTC_RS13535 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CTC_RS13540 PF02151 UvrB/uvrC motif CTC_RS13545 PF05848 CtsR N-terminal HTH domain CTC_RS13545 PF17727 CtsR C-terminal dimerization domain CTC_RS13550 PF00300 Histidine phosphatase superfamily (branch 1) CTC_RS13560 PF02915 Rubrerythrin CTC_RS13565 PF03144 Elongation factor Tu domain 2 CTC_RS13565 PF00009 Elongation factor Tu GTP binding domain CTC_RS13565 PF03764 Elongation factor G, domain IV CTC_RS13565 PF14492 Elongation Factor G, domain II CTC_RS13565 PF00679 Elongation factor G C-terminus CTC_RS13830 PF02403 Seryl-tRNA synthetase N-terminal domain CTC_RS13830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTC_RS13870 PF03699 Uncharacterised protein family (UPF0182) CTC_RS14075 PF03734 L,D-transpeptidase catalytic domain CTC_RS14110 PF01520 N-acetylmuramoyl-L-alanine amidase CTC_RS14110 PF04122 Putative cell wall binding repeat 2 CTC_RS14120 PF00884 Sulfatase CTC_RS14135 PF04205 FMN-binding domain CTC_RS14150 PF02368 Bacterial Ig-like domain (group 2) CTC_RS14155 PF01522 Polysaccharide deacetylase CTC_RS14175 PF01569 PAP2 superfamily CTC_RS14180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTC_RS14180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CTC_RS14185 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CTC_RS14200 PF04791 LMBR1-like membrane protein CTC_RS14220 PF01435 Peptidase family M48 CTC_RS14255 PF02567 Phenazine biosynthesis-like protein CTC_RS14275 PF01867 CRISPR associated protein Cas1 CTC_RS14280 PF12671 Putative amidase domain CTC_RS14290 PF12708 Pectate lyase superfamily protein CTC_RS14290 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain CTC_RS14300 PF03646 FlaG protein CTC_RS14305 PF00563 EAL domain CTC_RS14305 PF03707 Bacterial signalling protein N terminal repeat CTC_RS14305 PF00990 Diguanylate cyclase, GGDEF domain CTC_RS14310 PF00990 Diguanylate cyclase, GGDEF domain CTC_RS14315 PF00672 HAMP domain CTC_RS14315 PF02743 Cache domain CTC_RS14315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTC_RS14320 PF02743 Cache domain CTC_RS14320 PF00672 HAMP domain CTC_RS14320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC_RS14320 PF06580 Histidine kinase