locus-tag class description GQS55_RS00005 PF00308 Bacterial dnaA protein GQS55_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix GQS55_RS00005 PF11638 DnaA N-terminal domain GQS55_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GQS55_RS00010 PF02767 DNA polymerase III beta subunit, central domain GQS55_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GQS55_RS00015 PF02463 RecF/RecN/SMC N terminal domain GQS55_RS00020 PF00204 DNA gyrase B GQS55_RS00020 PF01751 Toprim domain GQS55_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus GQS55_RS00020 PF18053 DNA gyrase B subunit insert domain GQS55_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS00025 PF02091 Glycyl-tRNA synthetase alpha subunit GQS55_RS00030 PF02092 Glycyl-tRNA synthetase beta subunit GQS55_RS00030 PF05746 DALR anticodon binding domain GQS55_RS00035 PF10502 Signal peptidase, peptidase S26 GQS55_RS00045 PF01206 Sulfurtransferase TusA GQS55_RS00050 PF14718 Soluble lytic murein transglycosylase L domain GQS55_RS00050 PF01464 Transglycosylase SLT domain GQS55_RS00055 PF00557 Metallopeptidase family M24 GQS55_RS00060 PF09186 Domain of unknown function (DUF1949) GQS55_RS00060 PF01205 Uncharacterized protein family UPF0029 GQS55_RS00065 PF02386 Cation transport protein GQS55_RS00070 PF02080 TrkA-C domain GQS55_RS00070 PF02254 TrkA-N domain GQS55_RS00075 PF01189 16S rRNA methyltransferase RsmB/F GQS55_RS00075 PF01029 NusB family GQS55_RS00080 PF02911 Formyl transferase, C-terminal domain GQS55_RS00080 PF00551 Formyl transferase GQS55_RS00095 PF02481 DNA recombination-mediator protein A GQS55_RS00095 PF17782 DprA winged helix domain GQS55_RS00100 PF04361 Protein of unknown function (DUF494) GQS55_RS00105 PF01396 Topoisomerase DNA binding C4 zinc finger GQS55_RS00105 PF01751 Toprim domain GQS55_RS00105 PF01131 DNA topoisomerase GQS55_RS00105 PF08272 Topoisomerase I zinc-ribbon-like GQS55_RS00110 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GQS55_RS00110 PF02222 ATP-grasp domain GQS55_RS00115 PF00731 AIR carboxylase GQS55_RS00120 PF01300 Telomere recombination GQS55_RS00130 PF03922 OmpW family GQS55_RS00135 PF01488 Shikimate / quinate 5-dehydrogenase GQS55_RS00135 PF08501 Shikimate dehydrogenase substrate binding domain GQS55_RS00135 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GQS55_RS00145 PF00132 Bacterial transferase hexapeptide (six repeats) GQS55_RS00180 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS00180 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS00180 PF00563 EAL domain GQS55_RS00185 PF02416 mttA/Hcf106 family GQS55_RS00190 PF02416 mttA/Hcf106 family GQS55_RS00195 PF00902 Sec-independent protein translocase protein (TatC) GQS55_RS00205 PF01026 TatD related DNase GQS55_RS00210 PF00072 Response regulator receiver domain GQS55_RS00210 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS00215 PF00490 Delta-aminolevulinic acid dehydratase GQS55_RS00225 PF00270 DEAD/DEAH box helicase GQS55_RS00225 PF00271 Helicase conserved C-terminal domain GQS55_RS00230 PF00085 Thioredoxin GQS55_RS00235 PF01595 Cyclin M transmembrane N-terminal domain GQS55_RS00235 PF03471 Transporter associated domain GQS55_RS00235 PF00571 CBS domain GQS55_RS00240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GQS55_RS00240 PF07498 Rho termination factor, N-terminal domain GQS55_RS00240 PF07497 Rho termination factor, RNA-binding domain GQS55_RS00250 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GQS55_RS00255 PF00175 Oxidoreductase NAD-binding domain GQS55_RS00260 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS00260 PF00593 TonB dependent receptor GQS55_RS00280 PF00667 FAD binding domain GQS55_RS00280 PF00258 Flavodoxin GQS55_RS00280 PF00175 Oxidoreductase NAD-binding domain GQS55_RS00300 PF03900 Porphobilinogen deaminase, C-terminal domain GQS55_RS00300 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GQS55_RS00305 PF01491 Frataxin-like domain GQS55_RS00315 PF01678 Diaminopimelate epimerase GQS55_RS00325 PF13419 Haloacid dehalogenase-like hydrolase GQS55_RS00330 PF00580 UvrD/REP helicase N-terminal domain GQS55_RS00330 PF13361 UvrD-like helicase C-terminal domain GQS55_RS00335 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS00335 PF17158 Membrane-associated sensor, integral membrane domain GQS55_RS00380 PF00691 OmpA family GQS55_RS00380 PF01389 OmpA-like transmembrane domain GQS55_RS00420 PF00589 Phage integrase family GQS55_RS00420 PF12167 Arm DNA-binding domain GQS55_RS00440 PF01867 CRISPR associated protein Cas1 GQS55_RS00445 PF18019 HD domain GQS55_RS00450 PF09611 CRISPR-associated protein (Cas_Csy1) GQS55_RS00460 PF09615 CRISPR-associated protein (Cas_Csy3) GQS55_RS00475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQS55_RS00475 PF00529 HlyD membrane-fusion protein of T1SS GQS55_RS00480 PF00873 AcrB/AcrD/AcrF family GQS55_RS00490 PF02954 Bacterial regulatory protein, Fis family GQS55_RS00490 PF00072 Response regulator receiver domain GQS55_RS00490 PF00158 Sigma-54 interaction domain GQS55_RS00495 PF13401 AAA domain GQS55_RS00495 PF01471 Putative peptidoglycan binding domain GQS55_RS00505 PF13614 AAA domain GQS55_RS00515 PF02563 Polysaccharide biosynthesis/export protein GQS55_RS00515 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GQS55_RS00515 PF10531 SLBB domain GQS55_RS00520 PF02397 Bacterial sugar transferase GQS55_RS00525 PF01522 Polysaccharide deacetylase GQS55_RS00535 PF00535 Glycosyl transferase family 2 GQS55_RS00540 PF00132 Bacterial transferase hexapeptide (six repeats) GQS55_RS00550 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain GQS55_RS00550 PF01522 Polysaccharide deacetylase GQS55_RS00555 PF13439 Glycosyltransferase Family 4 GQS55_RS00555 PF00534 Glycosyl transferases group 1 GQS55_RS00590 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GQS55_RS00595 PF01467 Cytidylyltransferase-like GQS55_RS00610 PF00535 Glycosyl transferase family 2 GQS55_RS00620 PF13439 Glycosyltransferase Family 4 GQS55_RS00620 PF00534 Glycosyl transferases group 1 GQS55_RS00625 PF00534 Glycosyl transferases group 1 GQS55_RS00625 PF13439 Glycosyltransferase Family 4 GQS55_RS00655 PF00899 ThiF family GQS55_RS00660 PF01050 Mannose-6-phosphate isomerase GQS55_RS00660 PF00483 Nucleotidyl transferase GQS55_RS00665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GQS55_RS00665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GQS55_RS00665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GQS55_RS00665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GQS55_RS00680 PF13180 PDZ domain GQS55_RS00685 PF04748 Divergent polysaccharide deacetylase GQS55_RS00690 PF01551 Peptidase family M23 GQS55_RS00695 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GQS55_RS00695 PF01676 Metalloenzyme superfamily GQS55_RS00705 PF00462 Glutaredoxin GQS55_RS00710 PF02556 Preprotein translocase subunit SecB GQS55_RS00715 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GQS55_RS00715 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GQS55_RS00720 PF00588 SpoU rRNA Methylase family GQS55_RS00725 PF16916 Dimerisation domain of Zinc Transporter GQS55_RS00725 PF01545 Cation efflux family GQS55_RS00730 PF12146 Serine aminopeptidase, S33 GQS55_RS00735 PF04380 Membrane fusogenic activity GQS55_RS00740 PF00580 UvrD/REP helicase N-terminal domain GQS55_RS00740 PF13361 UvrD-like helicase C-terminal domain GQS55_RS00745 PF03109 ABC1 family GQS55_RS00760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS00760 PF00672 HAMP domain GQS55_RS00760 PF12729 Four helix bundle sensory module for signal transduction GQS55_RS00765 PF07995 Glucose / Sorbosone dehydrogenase GQS55_RS00770 PF00069 Protein kinase domain GQS55_RS00770 PF13191 AAA ATPase domain GQS55_RS00780 PF00528 Binding-protein-dependent transport system inner membrane component GQS55_RS00785 PF00528 Binding-protein-dependent transport system inner membrane component GQS55_RS00790 PF00005 ABC transporter GQS55_RS00790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GQS55_RS00795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GQS55_RS00795 PF00005 ABC transporter GQS55_RS00800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GQS55_RS00805 PF01209 ubiE/COQ5 methyltransferase family GQS55_RS00810 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS00810 PF00593 TonB dependent receptor GQS55_RS00815 PF00043 Glutathione S-transferase, C-terminal domain GQS55_RS00815 PF02798 Glutathione S-transferase, N-terminal domain GQS55_RS00825 PF00884 Sulfatase GQS55_RS00825 PF08019 Phosphoethanolamine transferase EptA/EptB GQS55_RS00830 PF01219 Prokaryotic diacylglycerol kinase GQS55_RS00835 PF00072 Response regulator receiver domain GQS55_RS00835 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS00840 PF00672 HAMP domain GQS55_RS00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS00840 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS00850 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GQS55_RS00860 PF01926 50S ribosome-binding GTPase GQS55_RS00865 PF00034 Cytochrome c GQS55_RS00875 PF04403 Paraquat-inducible protein A GQS55_RS00880 PF02470 MlaD protein GQS55_RS00885 PF02581 Thiamine monophosphate synthase GQS55_RS00890 PF05690 Thiazole biosynthesis protein ThiG GQS55_RS00900 PF01266 FAD dependent oxidoreductase GQS55_RS00905 PF13667 ThiC-associated domain GQS55_RS00905 PF01964 Radical SAM ThiC family GQS55_RS00930 PF00497 Bacterial extracellular solute-binding proteins, family 3 GQS55_RS00930 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS00930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS00940 PF00585 C-terminal regulatory domain of Threonine dehydratase GQS55_RS00940 PF00291 Pyridoxal-phosphate dependent enzyme GQS55_RS00945 PF00920 Dehydratase family GQS55_RS00950 PF01063 Amino-transferase class IV GQS55_RS00960 PF00205 Thiamine pyrophosphate enzyme, central domain GQS55_RS00960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GQS55_RS00960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GQS55_RS00965 PF01078 Magnesium chelatase, subunit ChlI GQS55_RS00965 PF13335 Magnesium chelatase, subunit ChlI C-terminal GQS55_RS00970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS00970 PF03466 LysR substrate binding domain GQS55_RS00975 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GQS55_RS00975 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GQS55_RS00980 PF06865 Pyrimidine/purine nucleoside phosphorylase GQS55_RS00985 PF01925 Sulfite exporter TauE/SafE GQS55_RS00990 PF01145 SPFH domain / Band 7 family GQS55_RS01015 PF00012 Hsp70 protein GQS55_RS01025 PF00171 Aldehyde dehydrogenase family GQS55_RS01030 PF01472 PUA domain GQS55_RS01030 PF00696 Amino acid kinase family GQS55_RS01035 PF01553 Acyltransferase GQS55_RS01040 PF00924 Mechanosensitive ion channel GQS55_RS01045 PF00578 AhpC/TSA family GQS55_RS01050 PF00141 Peroxidase GQS55_RS01055 PF13192 Thioredoxin domain GQS55_RS01055 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS01060 PF00578 AhpC/TSA family GQS55_RS01065 PF00199 Catalase GQS55_RS01065 PF06628 Catalase-related immune-responsive GQS55_RS01070 PF03466 LysR substrate binding domain GQS55_RS01070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS01105 PF04463 Protein of unknown function (DUF523) GQS55_RS01115 PF00034 Cytochrome c GQS55_RS01120 PF00570 HRDC domain GQS55_RS01120 PF16124 RecQ zinc-binding GQS55_RS01120 PF09382 RQC domain GQS55_RS01120 PF00271 Helicase conserved C-terminal domain GQS55_RS01120 PF00270 DEAD/DEAH box helicase GQS55_RS01125 PF03061 Thioesterase superfamily GQS55_RS01130 PF00892 EamA-like transporter family GQS55_RS01135 PF00436 Single-strand binding protein family GQS55_RS01145 PF01323 DSBA-like thioredoxin domain GQS55_RS01150 PF01636 Phosphotransferase enzyme family GQS55_RS01155 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase GQS55_RS01155 PF13746 4Fe-4S dicluster domain GQS55_RS01155 PF12801 4Fe-4S binding domain GQS55_RS01165 PF01979 Amidohydrolase family GQS55_RS01190 PF00460 Flagella basal body rod protein GQS55_RS01195 PF00460 Flagella basal body rod protein GQS55_RS01195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GQS55_RS01205 PF07559 Flagellar basal body protein FlaE GQS55_RS01205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GQS55_RS01205 PF00460 Flagella basal body rod protein GQS55_RS01210 PF00460 Flagella basal body rod protein GQS55_RS01210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GQS55_RS01215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GQS55_RS01215 PF00460 Flagella basal body rod protein GQS55_RS01220 PF02107 Flagellar L-ring protein GQS55_RS01225 PF02119 Flagellar P-ring protein GQS55_RS01235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GQS55_RS01235 PF00460 Flagella basal body rod protein GQS55_RS01250 PF00669 Bacterial flagellin N-terminal helical region GQS55_RS01250 PF00700 Bacterial flagellin C-terminal helical region GQS55_RS01255 PF07196 Flagellin hook IN motif GQS55_RS01255 PF02465 Flagellar hook-associated protein 2 N-terminus GQS55_RS01255 PF07195 Flagellar hook-associated protein 2 C-terminus GQS55_RS01280 PF04545 Sigma-70, region 4 GQS55_RS01280 PF04542 Sigma-70 region 2 GQS55_RS01285 PF01618 MotA/TolQ/ExbB proton channel family GQS55_RS01290 PF00691 OmpA family GQS55_RS01290 PF13677 Membrane MotB of proton-channel complex MotA/MotB GQS55_RS01305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GQS55_RS01310 PF00813 FliP family GQS55_RS01315 PF01313 Bacterial export proteins, family 3 GQS55_RS01320 PF01311 Bacterial export proteins, family 1 GQS55_RS01325 PF01312 FlhB HrpN YscU SpaS Family GQS55_RS01330 PF00771 FHIPEP family GQS55_RS01335 PF00691 OmpA family GQS55_RS01340 PF00158 Sigma-54 interaction domain GQS55_RS01340 PF00072 Response regulator receiver domain GQS55_RS01340 PF02954 Bacterial regulatory protein, Fis family GQS55_RS01345 PF02049 Flagellar hook-basal body complex protein FliE GQS55_RS01350 PF08345 Flagellar M-ring protein C-terminal GQS55_RS01350 PF01514 Secretory protein of YscJ/FliF family GQS55_RS01365 PF18269 T3SS EscN ATPase C-terminal domain GQS55_RS01365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GQS55_RS01380 PF01232 Mannitol dehydrogenase Rossmann domain GQS55_RS01380 PF08125 Mannitol dehydrogenase C-terminal domain GQS55_RS01385 PF00294 pfkB family carbohydrate kinase GQS55_RS01390 PF13419 Haloacid dehalogenase-like hydrolase GQS55_RS01400 PF00342 Phosphoglucose isomerase GQS55_RS01405 PF00270 DEAD/DEAH box helicase GQS55_RS01405 PF08482 ATP-dependent helicase C-terminal GQS55_RS01405 PF00271 Helicase conserved C-terminal domain GQS55_RS01405 PF04408 Helicase associated domain (HA2) GQS55_RS01415 PF00905 Penicillin binding protein transpeptidase domain GQS55_RS01415 PF14814 Bifunctional transglycosylase second domain GQS55_RS01415 PF00912 Transglycosylase GQS55_RS01430 PF00742 Homoserine dehydrogenase GQS55_RS01430 PF13840 ACT domain GQS55_RS01430 PF01842 ACT domain GQS55_RS01430 PF00696 Amino acid kinase family GQS55_RS01430 PF03447 Homoserine dehydrogenase, NAD binding domain GQS55_RS01440 PF14821 Threonine synthase N terminus GQS55_RS01440 PF00291 Pyridoxal-phosphate dependent enzyme GQS55_RS01445 PF03167 Uracil DNA glycosylase superfamily GQS55_RS01470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GQS55_RS01470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GQS55_RS01490 PF00085 Thioredoxin GQS55_RS01495 PF03466 LysR substrate binding domain GQS55_RS01495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS01525 PF01548 Transposase GQS55_RS01525 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS01530 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS01530 PF01548 Transposase GQS55_RS01560 PF01432 Peptidase family M3 GQS55_RS01575 PF09500 Putative thioesterase (yiiD_Cterm) GQS55_RS01575 PF00583 Acetyltransferase (GNAT) family GQS55_RS01585 PF01370 NAD dependent epimerase/dehydratase family GQS55_RS01590 PF01207 Dihydrouridine synthase (Dus) GQS55_RS01595 PF00221 Aromatic amino acid lyase GQS55_RS01600 PF17392 Urocanase C-terminal domain GQS55_RS01600 PF17391 Urocanase N-terminal domain GQS55_RS01600 PF01175 Urocanase Rossmann-like domain GQS55_RS01605 PF00392 Bacterial regulatory proteins, gntR family GQS55_RS01605 PF07702 UTRA domain GQS55_RS01610 PF01979 Amidohydrolase family GQS55_RS01620 PF01590 GAF domain GQS55_RS01620 PF00360 Phytochrome region GQS55_RS01620 PF00563 EAL domain GQS55_RS01620 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS01630 PF03009 Glycerophosphoryl diester phosphodiesterase family GQS55_RS01635 PF00849 RNA pseudouridylate synthase GQS55_RS01635 PF01479 S4 domain GQS55_RS01640 PF00206 Lyase GQS55_RS01640 PF10415 Fumarase C C-terminus GQS55_RS01650 PF00501 AMP-binding enzyme GQS55_RS01650 PF16177 Acetyl-coenzyme A synthetase N-terminus GQS55_RS01650 PF13193 AMP-binding enzyme C-terminal domain GQS55_RS01675 PF17755 UvrA DNA-binding domain GQS55_RS01675 PF00005 ABC transporter GQS55_RS01675 PF17760 UvrA interaction domain GQS55_RS01680 PF07690 Major Facilitator Superfamily GQS55_RS01700 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS01700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GQS55_RS01705 PF13091 PLD-like domain GQS55_RS01720 PF00436 Single-strand binding protein family GQS55_RS01730 PF17158 Membrane-associated sensor, integral membrane domain GQS55_RS01730 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS01740 PF03781 Sulfatase-modifying factor enzyme 1 GQS55_RS01740 PF12867 DinB superfamily GQS55_RS01745 PF00543 Nitrogen regulatory protein P-II GQS55_RS01750 PF00909 Ammonium Transporter Family GQS55_RS01755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GQS55_RS01760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS01760 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS01760 PF01627 Hpt domain GQS55_RS01760 PF00072 Response regulator receiver domain GQS55_RS01760 PF00497 Bacterial extracellular solute-binding proteins, family 3 GQS55_RS01765 PF04261 Dyp-type peroxidase family GQS55_RS01775 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS01775 PF12806 Acetyl-CoA dehydrogenase C-terminal like GQS55_RS01775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS01775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS01785 PF00072 Response regulator receiver domain GQS55_RS01785 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS01790 PF02381 MraZ protein, putative antitoxin-like GQS55_RS01795 PF01795 MraW methylase family GQS55_RS01800 PF04999 Cell division protein FtsL GQS55_RS01805 PF03717 Penicillin-binding Protein dimerisation domain GQS55_RS01805 PF00905 Penicillin binding protein transpeptidase domain GQS55_RS01810 PF01225 Mur ligase family, catalytic domain GQS55_RS01810 PF08245 Mur ligase middle domain GQS55_RS01810 PF02875 Mur ligase family, glutamate ligase domain GQS55_RS01815 PF01225 Mur ligase family, catalytic domain GQS55_RS01815 PF08245 Mur ligase middle domain GQS55_RS01815 PF02875 Mur ligase family, glutamate ligase domain GQS55_RS01820 PF00953 Glycosyl transferase family 4 GQS55_RS01820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GQS55_RS01825 PF08245 Mur ligase middle domain GQS55_RS01825 PF02875 Mur ligase family, glutamate ligase domain GQS55_RS01830 PF01098 Cell cycle protein GQS55_RS01835 PF04101 Glycosyltransferase family 28 C-terminal domain GQS55_RS01835 PF03033 Glycosyltransferase family 28 N-terminal domain GQS55_RS01840 PF01225 Mur ligase family, catalytic domain GQS55_RS01840 PF02875 Mur ligase family, glutamate ligase domain GQS55_RS01840 PF08245 Mur ligase middle domain GQS55_RS01845 PF07478 D-ala D-ala ligase C-terminus GQS55_RS01845 PF01820 D-ala D-ala ligase N-terminus GQS55_RS01850 PF08478 POTRA domain, FtsQ-type GQS55_RS01850 PF03799 Cell division protein FtsQ GQS55_RS01855 PF02491 SHS2 domain inserted in FTSA GQS55_RS01860 PF00091 Tubulin/FtsZ family, GTPase domain GQS55_RS01860 PF12327 FtsZ family, C-terminal domain GQS55_RS01865 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GQS55_RS01880 PF02810 SEC-C motif GQS55_RS01880 PF07517 SecA DEAD-like domain GQS55_RS01880 PF07516 SecA Wing and Scaffold domain GQS55_RS01880 PF01043 SecA preprotein cross-linking domain GQS55_RS01885 PF00293 NUDIX domain GQS55_RS01890 PF03884 DNA gyrase inhibitor YacG GQS55_RS01895 PF07072 Cell division protein GQS55_RS01900 PF01121 Dephospho-CoA kinase GQS55_RS01905 PF01478 Type IV leader peptidase family GQS55_RS01905 PF06750 Bacterial Peptidase A24 N-terminal domain GQS55_RS01910 PF00482 Type II secretion system (T2SS), protein F GQS55_RS01915 PF00437 Type II/IV secretion system protein GQS55_RS01915 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GQS55_RS01925 PF00114 Pilin (bacterial filament) GQS55_RS01925 PF07963 Prokaryotic N-terminal methylation motif GQS55_RS01930 PF00572 Ribosomal protein L13 GQS55_RS01935 PF00380 Ribosomal protein S9/S16 GQS55_RS01940 PF00355 Rieske [2Fe-2S] domain GQS55_RS01940 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GQS55_RS01945 PF00033 Cytochrome b/b6/petB GQS55_RS01945 PF00032 Cytochrome b(C-terminal)/b6/petD GQS55_RS01950 PF02167 Cytochrome C1 family GQS55_RS01955 PF00043 Glutathione S-transferase, C-terminal domain GQS55_RS01955 PF02798 Glutathione S-transferase, N-terminal domain GQS55_RS01960 PF04386 Stringent starvation protein B GQS55_RS01965 PF04972 BON domain GQS55_RS01970 PF13580 SIS domain GQS55_RS01975 PF02021 Uncharacterised protein family UPF0102 GQS55_RS01980 PF04348 LppC putative lipoprotein GQS55_RS01985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GQS55_RS02000 PF02634 FdhD/NarQ family GQS55_RS02005 PF00384 Molybdopterin oxidoreductase GQS55_RS02005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GQS55_RS02005 PF01568 Molydopterin dinucleotide binding domain GQS55_RS02005 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GQS55_RS02005 PF00037 4Fe-4S binding domain GQS55_RS02010 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GQS55_RS02010 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GQS55_RS02010 PF00037 4Fe-4S binding domain GQS55_RS02025 PF07690 Major Facilitator Superfamily GQS55_RS02045 PF01569 PAP2 superfamily GQS55_RS02065 PF00849 RNA pseudouridylate synthase GQS55_RS02065 PF01479 S4 domain GQS55_RS02080 PF13188 PAS domain GQS55_RS02080 PF00563 EAL domain GQS55_RS02080 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS02080 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS02085 PF13180 PDZ domain GQS55_RS02090 PF00595 PDZ domain GQS55_RS02100 PF03969 AFG1-like ATPase GQS55_RS02105 PF00085 Thioredoxin GQS55_RS02110 PF02673 Bacitracin resistance protein BacA GQS55_RS02115 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GQS55_RS02120 PF02152 Dihydroneopterin aldolase GQS55_RS02125 PF02660 Glycerol-3-phosphate acyltransferase GQS55_RS02130 PF00814 Glycoprotease family GQS55_RS02135 PF01165 Ribosomal protein S21 GQS55_RS02140 PF09424 Yqey-like protein GQS55_RS02145 PF00291 Pyridoxal-phosphate dependent enzyme GQS55_RS02160 PF03412 Peptidase C39 family GQS55_RS02160 PF00664 ABC transporter transmembrane region GQS55_RS02160 PF00005 ABC transporter GQS55_RS02195 PF04085 rod shape-determining protein MreC GQS55_RS02200 PF04093 rod shape-determining protein MreD GQS55_RS02205 PF02545 Maf-like protein GQS55_RS02210 PF10150 Ribonuclease E/G family GQS55_RS02210 PF00575 S1 RNA binding domain GQS55_RS02215 PF13502 AsmA-like C-terminal region GQS55_RS02215 PF13116 Protein of unknown function GQS55_RS02220 PF00795 Carbon-nitrogen hydrolase GQS55_RS02225 PF01523 Putative modulator of DNA gyrase GQS55_RS02230 PF04751 Protein of unknown function (DUF615) GQS55_RS02235 PF01523 Putative modulator of DNA gyrase GQS55_RS02240 PF01769 Divalent cation transporter GQS55_RS02240 PF03448 MgtE intracellular N domain GQS55_RS02240 PF00571 CBS domain GQS55_RS02245 PF00381 PTS HPr component phosphorylation site GQS55_RS02250 PF03668 P-loop ATPase protein family GQS55_RS02255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GQS55_RS02260 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GQS55_RS02265 PF04552 Sigma-54, DNA binding domain GQS55_RS02265 PF00309 Sigma-54 factor, Activator interacting domain (AID) GQS55_RS02265 PF04963 Sigma-54 factor, core binding domain GQS55_RS02270 PF00005 ABC transporter GQS55_RS02270 PF12399 Branched-chain amino acid ATP-binding cassette transporter GQS55_RS02290 PF01380 SIS domain GQS55_RS02290 PF00571 CBS domain GQS55_RS02295 PF01699 Sodium/calcium exchanger protein GQS55_RS02300 PF00005 ABC transporter GQS55_RS02305 PF02405 Permease MlaE GQS55_RS02310 PF02470 MlaD protein GQS55_RS02315 PF05494 MlaC protein GQS55_RS02325 PF01722 BolA-like protein GQS55_RS02330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GQS55_RS02335 PF14850 DNA-binding domain of Proline dehydrogenase GQS55_RS02335 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GQS55_RS02335 PF00171 Aldehyde dehydrogenase family GQS55_RS02335 PF01619 Proline dehydrogenase GQS55_RS02340 PF01037 Lrp/AsnC ligand binding domain GQS55_RS02350 PF00209 Sodium:neurotransmitter symporter family GQS55_RS02355 PF17785 PUA-like domain GQS55_RS02355 PF10672 S-adenosylmethionine-dependent methyltransferase GQS55_RS02365 PF14743 DNA ligase OB-like domain GQS55_RS02365 PF01068 ATP dependent DNA ligase domain GQS55_RS02380 PF01541 GIY-YIG catalytic domain GQS55_RS02385 PF00472 RF-1 domain GQS55_RS02400 PF00313 'Cold-shock' DNA-binding domain GQS55_RS02405 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS02405 PF00593 TonB dependent receptor GQS55_RS02410 PF13181 Tetratricopeptide repeat GQS55_RS02415 PF00672 HAMP domain GQS55_RS02415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS02420 PF00149 Calcineurin-like phosphoesterase GQS55_RS02425 PF00398 Ribosomal RNA adenine dimethylase GQS55_RS02430 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GQS55_RS02435 PF00639 PPIC-type PPIASE domain GQS55_RS02435 PF09312 SurA N-terminal domain GQS55_RS02440 PF03968 OstA-like protein GQS55_RS02440 PF04453 LPS transport system D GQS55_RS02445 PF05099 Tellurite resistance protein TerB GQS55_RS02445 PF00226 DnaJ domain GQS55_RS02455 PF00849 RNA pseudouridylate synthase GQS55_RS02460 PF12137 RNA polymerase recycling family C-terminal GQS55_RS02460 PF00271 Helicase conserved C-terminal domain GQS55_RS02460 PF18337 RapA N-terminal Tudor like domain GQS55_RS02460 PF00176 SNF2 family N-terminal domain GQS55_RS02460 PF18339 RapA N-terminal Tudor like domain 1 GQS55_RS02470 PF07690 Major Facilitator Superfamily GQS55_RS02485 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GQS55_RS02485 PF00326 Prolyl oligopeptidase family GQS55_RS02490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS02490 PF03466 LysR substrate binding domain GQS55_RS02495 PF03601 Conserved hypothetical protein 698 GQS55_RS02505 PF04055 Radical SAM superfamily GQS55_RS02510 PF08207 Elongation factor P (EF-P) KOW-like domain GQS55_RS02510 PF09285 Elongation factor P, C-terminal GQS55_RS02510 PF01132 Elongation factor P (EF-P) OB domain GQS55_RS02515 PF02685 Glucokinase GQS55_RS02525 PF00924 Mechanosensitive ion channel GQS55_RS02525 PF05552 Conserved TM helix GQS55_RS02530 PF00248 Aldo/keto reductase family GQS55_RS02540 PF00005 ABC transporter GQS55_RS02545 PF01061 ABC-2 type transporter GQS55_RS02550 PF02390 Putative methyltransferase GQS55_RS02555 PF00282 Pyridoxal-dependent decarboxylase conserved domain GQS55_RS02560 PF02569 Pantoate-beta-alanine ligase GQS55_RS02565 PF02548 Ketopantoate hydroxymethyltransferase GQS55_RS02570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GQS55_RS02575 PF01743 Poly A polymerase head domain GQS55_RS02575 PF12627 Probable RNA and SrmB- binding site of polymerase A GQS55_RS02575 PF12626 Polymerase A arginine-rich C-terminus GQS55_RS02580 PF01613 Flavin reductase like domain GQS55_RS02585 PF00749 tRNA synthetases class I (E and Q), catalytic domain GQS55_RS02590 PF01258 Prokaryotic dksA/traR C4-type zinc finger GQS55_RS02595 PF00238 Ribosomal protein L14p/L23e GQS55_RS02600 PF00467 KOW motif GQS55_RS02600 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GQS55_RS02605 PF00673 ribosomal L5P family C-terminus GQS55_RS02605 PF00281 Ribosomal protein L5 GQS55_RS02610 PF00253 Ribosomal protein S14p/S29e GQS55_RS02615 PF00410 Ribosomal protein S8 GQS55_RS02620 PF00347 Ribosomal protein L6 GQS55_RS02625 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GQS55_RS02630 PF00333 Ribosomal protein S5, N-terminal domain GQS55_RS02630 PF03719 Ribosomal protein S5, C-terminal domain GQS55_RS02635 PF00327 Ribosomal protein L30p/L7e GQS55_RS02640 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GQS55_RS02645 PF00344 SecY translocase GQS55_RS02650 PF00444 Ribosomal protein L36 GQS55_RS02655 PF00416 Ribosomal protein S13/S18 GQS55_RS02660 PF00411 Ribosomal protein S11 GQS55_RS02665 PF01479 S4 domain GQS55_RS02665 PF00163 Ribosomal protein S4/S9 N-terminal domain GQS55_RS02670 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GQS55_RS02670 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GQS55_RS02670 PF01000 RNA polymerase Rpb3/RpoA insert domain GQS55_RS02675 PF01196 Ribosomal protein L17 GQS55_RS02680 PF00485 Phosphoribulokinase / Uridine kinase family GQS55_RS02695 PF02225 PA domain GQS55_RS02695 PF04389 Peptidase family M28 GQS55_RS02710 PF00171 Aldehyde dehydrogenase family GQS55_RS02715 PF04958 Arginine N-succinyltransferase beta subunit GQS55_RS02720 PF00202 Aminotransferase class-III GQS55_RS02730 PF00117 Glutamine amidotransferase class-I GQS55_RS02735 PF03476 MOSC N-terminal beta barrel domain GQS55_RS02735 PF03473 MOSC domain GQS55_RS02735 PF00111 2Fe-2S iron-sulfur cluster binding domain GQS55_RS02740 PF08245 Mur ligase middle domain GQS55_RS02740 PF02875 Mur ligase family, glutamate ligase domain GQS55_RS02740 PF01225 Mur ligase family, catalytic domain GQS55_RS02745 PF01979 Amidohydrolase family GQS55_RS02750 PF03737 Aldolase/RraA GQS55_RS02755 PF00563 EAL domain GQS55_RS02755 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS02755 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS02770 PF00004 ATPase family associated with various cellular activities (AAA) GQS55_RS02770 PF07724 AAA domain (Cdc48 subfamily) GQS55_RS02770 PF10431 C-terminal, D2-small domain, of ClpB protein GQS55_RS02780 PF05036 Sporulation related domain GQS55_RS02785 PF18074 Primosomal protein N C-terminal domain GQS55_RS02785 PF17764 3′ DNA-binding domain (3′BD) GQS55_RS02785 PF00271 Helicase conserved C-terminal domain GQS55_RS02785 PF00270 DEAD/DEAH box helicase GQS55_RS02785 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GQS55_RS02790 PF01197 Ribosomal protein L31 GQS55_RS02795 PF00772 DnaB-like helicase N terminal domain GQS55_RS02795 PF03796 DnaB-like helicase C terminal domain GQS55_RS02800 PF01894 Uncharacterised protein family UPF0047 GQS55_RS02805 PF03466 LysR substrate binding domain GQS55_RS02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS02815 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS02815 PF00593 TonB dependent receptor GQS55_RS02825 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GQS55_RS02825 PF12557 Cob(I)alamin adenosyltransferase N terminal GQS55_RS02830 PF01032 FecCD transport family GQS55_RS02835 PF00005 ABC transporter GQS55_RS02840 PF00210 Ferritin-like domain GQS55_RS02845 PF00210 Ferritin-like domain GQS55_RS02855 PF01431 Peptidase family M13 GQS55_RS02855 PF05649 Peptidase family M13 GQS55_RS02860 PF02909 Tetracyclin repressor-like, C-terminal domain GQS55_RS02860 PF00440 Bacterial regulatory proteins, tetR family GQS55_RS02885 PF00563 EAL domain GQS55_RS02885 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS02885 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS02895 PF00012 Hsp70 protein GQS55_RS02935 PF00107 Zinc-binding dehydrogenase GQS55_RS02935 PF08240 Alcohol dehydrogenase GroES-like domain GQS55_RS02940 PF00881 Nitroreductase family GQS55_RS02950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS02950 PF03466 LysR substrate binding domain GQS55_RS02970 PF00005 ABC transporter GQS55_RS02970 PF00664 ABC transporter transmembrane region GQS55_RS02975 PF00005 ABC transporter GQS55_RS02975 PF00664 ABC transporter transmembrane region GQS55_RS02985 PF02322 Cytochrome bd terminal oxidase subunit II GQS55_RS02990 PF01654 Cytochrome bd terminal oxidase subunit I GQS55_RS03000 PF01590 GAF domain GQS55_RS03000 PF02954 Bacterial regulatory protein, Fis family GQS55_RS03000 PF00158 Sigma-54 interaction domain GQS55_RS03010 PF00596 Class II Aldolase and Adducin N-terminal domain GQS55_RS03015 PF13378 Enolase C-terminal domain-like GQS55_RS03015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GQS55_RS03040 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS03040 PF12806 Acetyl-CoA dehydrogenase C-terminal like GQS55_RS03040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS03040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS03045 PF05199 GMC oxidoreductase GQS55_RS03045 PF00732 GMC oxidoreductase GQS55_RS03050 PF01566 Natural resistance-associated macrophage protein GQS55_RS03055 PF05048 Periplasmic copper-binding protein (NosD) GQS55_RS03060 PF00005 ABC transporter GQS55_RS03065 PF12679 ABC-2 family transporter protein GQS55_RS03070 PF05573 NosL GQS55_RS03085 PF03458 UPF0126 domain GQS55_RS03100 PF01048 Phosphorylase superfamily GQS55_RS03120 PF12833 Helix-turn-helix domain GQS55_RS03125 PF00109 Beta-ketoacyl synthase, N-terminal domain GQS55_RS03125 PF02801 Beta-ketoacyl synthase, C-terminal domain GQS55_RS03140 PF01131 DNA topoisomerase GQS55_RS03140 PF01751 Toprim domain GQS55_RS03145 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GQS55_RS03150 PF01799 [2Fe-2S] binding domain GQS55_RS03150 PF00111 2Fe-2S iron-sulfur cluster binding domain GQS55_RS03170 PF17284 Spermidine synthase tetramerisation domain GQS55_RS03180 PF00491 Arginase family GQS55_RS03185 PF00691 OmpA family GQS55_RS03185 PF05736 OprF membrane domain GQS55_RS03220 PF01960 ArgJ family GQS55_RS03235 PF03466 LysR substrate binding domain GQS55_RS03235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS03275 PF00491 Arginase family GQS55_RS03280 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GQS55_RS03280 PF17944 Arginine decarboxylase C-terminal helical extension GQS55_RS03280 PF17810 Arginine decarboxylase helical bundle domain GQS55_RS03330 PF04362 Bacterial Fe(2+) trafficking GQS55_RS03335 PF10576 Iron-sulfur binding domain of endonuclease III GQS55_RS03335 PF14815 NUDIX domain GQS55_RS03335 PF00633 Helix-hairpin-helix motif GQS55_RS03335 PF00730 HhH-GPD superfamily base excision DNA repair protein GQS55_RS03340 PF04320 Protein with unknown function (DUF469) GQS55_RS03345 PF02390 Putative methyltransferase GQS55_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS03355 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS03355 PF00989 PAS fold GQS55_RS03360 PF00916 Sulfate permease family GQS55_RS03360 PF01740 STAS domain GQS55_RS03365 PF06945 Protein of unknown function (DUF1289) GQS55_RS03385 PF00535 Glycosyl transferase family 2 GQS55_RS03425 PF13614 AAA domain GQS55_RS03425 PF02706 Chain length determinant protein GQS55_RS03425 PF13807 G-rich domain on putative tyrosine kinase GQS55_RS03440 PF02350 UDP-N-acetylglucosamine 2-epimerase GQS55_RS03445 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GQS55_RS03445 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GQS55_RS03445 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GQS55_RS03450 PF16363 GDP-mannose 4,6 dehydratase GQS55_RS03455 PF00483 Nucleotidyl transferase GQS55_RS03460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GQS55_RS03480 PF00535 Glycosyl transferase family 2 GQS55_RS03485 PF00733 Asparagine synthase GQS55_RS03485 PF13537 Glutamine amidotransferase domain GQS55_RS03495 PF00132 Bacterial transferase hexapeptide (six repeats) GQS55_RS03510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GQS55_RS03510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GQS55_RS03525 PF02397 Bacterial sugar transferase GQS55_RS03530 PF12464 Maltose acetyltransferase GQS55_RS03530 PF00132 Bacterial transferase hexapeptide (six repeats) GQS55_RS03540 PF01850 PIN domain GQS55_RS03545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GQS55_RS03585 PF02719 Polysaccharide biosynthesis protein GQS55_RS03590 PF00155 Aminotransferase class I and II GQS55_RS03595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS03595 PF09308 LuxQ, periplasmic GQS55_RS03595 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS03595 PF00072 Response regulator receiver domain GQS55_RS03600 PF03705 CheR methyltransferase, all-alpha domain GQS55_RS03600 PF01739 CheR methyltransferase, SAM binding domain GQS55_RS03605 PF01339 CheB methylesterase GQS55_RS03610 PF00563 EAL domain GQS55_RS03610 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS03610 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS03615 PF03006 Haemolysin-III related GQS55_RS03625 PF00561 alpha/beta hydrolase fold GQS55_RS03630 PF00005 ABC transporter GQS55_RS03650 PF00464 Serine hydroxymethyltransferase GQS55_RS03655 PF03477 ATP cone domain GQS55_RS03660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GQS55_RS03660 PF01872 RibD C-terminal domain GQS55_RS03665 PF00677 Lumazine binding domain GQS55_RS03670 PF00925 GTP cyclohydrolase II GQS55_RS03670 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GQS55_RS03685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQS55_RS03690 PF00873 AcrB/AcrD/AcrF family GQS55_RS03695 PF00593 TonB dependent receptor GQS55_RS03695 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS03730 PF00313 'Cold-shock' DNA-binding domain GQS55_RS03735 PF08264 Anticodon-binding domain of tRNA GQS55_RS03735 PF00133 tRNA synthetases class I (I, L, M and V) GQS55_RS03735 PF10458 Valyl tRNA synthetase tRNA binding arm GQS55_RS03740 PF04364 DNA polymerase III chi subunit, HolC GQS55_RS03745 PF02789 Cytosol aminopeptidase family, N-terminal domain GQS55_RS03745 PF00883 Cytosol aminopeptidase family, catalytic domain GQS55_RS03750 PF03739 Lipopolysaccharide export system permease LptF/LptG GQS55_RS03755 PF03739 Lipopolysaccharide export system permease LptF/LptG GQS55_RS03765 PF00873 AcrB/AcrD/AcrF family GQS55_RS03770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQS55_RS03805 PF16450 Proteasomal ATPase OB C-terminal domain GQS55_RS03805 PF00004 ATPase family associated with various cellular activities (AAA) GQS55_RS03805 PF17758 Proteasomal ATPase OB N-terminal domain GQS55_RS03820 PF00580 UvrD/REP helicase N-terminal domain GQS55_RS03820 PF13361 UvrD-like helicase C-terminal domain GQS55_RS03845 PF00239 Resolvase, N terminal domain GQS55_RS03845 PF02796 Helix-turn-helix domain of resolvase GQS55_RS03885 PF01380 SIS domain GQS55_RS03895 PF03702 Anhydro-N-acetylmuramic acid kinase GQS55_RS03900 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS03900 PF00593 TonB dependent receptor GQS55_RS03930 PF13358 DDE superfamily endonuclease GQS55_RS03935 PF13358 DDE superfamily endonuclease GQS55_RS03945 PF04205 FMN-binding domain GQS55_RS03945 PF12801 4Fe-4S binding domain GQS55_RS03960 PF00356 Bacterial regulatory proteins, lacI family GQS55_RS03965 PF00474 Sodium:solute symporter family GQS55_RS03990 PF01590 GAF domain GQS55_RS03990 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS03990 PF00563 EAL domain GQS55_RS03990 PF00360 Phytochrome region GQS55_RS04000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GQS55_RS04000 PF13378 Enolase C-terminal domain-like GQS55_RS04010 PF00474 Sodium:solute symporter family GQS55_RS04025 PF01467 Cytidylyltransferase-like GQS55_RS04025 PF00293 NUDIX domain GQS55_RS04055 PF00728 Glycosyl hydrolase family 20, catalytic domain GQS55_RS04055 PF02838 Glycosyl hydrolase family 20, domain 2 GQS55_RS04055 PF03173 Putative carbohydrate binding domain GQS55_RS04060 PF00593 TonB dependent receptor GQS55_RS04060 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS04065 PF13181 Tetratricopeptide repeat GQS55_RS04075 PF02556 Preprotein translocase subunit SecB GQS55_RS04085 PF01053 Cys/Met metabolism PLP-dependent enzyme GQS55_RS04095 PF00270 DEAD/DEAH box helicase GQS55_RS04095 PF00271 Helicase conserved C-terminal domain GQS55_RS04110 PF00174 Oxidoreductase molybdopterin binding domain GQS55_RS04115 PF01794 Ferric reductase like transmembrane component GQS55_RS04120 PF01979 Amidohydrolase family GQS55_RS04130 PF01869 BadF/BadG/BcrA/BcrD ATPase family GQS55_RS04135 PF01979 Amidohydrolase family GQS55_RS04150 PF03100 CcmE GQS55_RS04155 PF04995 Heme exporter protein D (CcmD) GQS55_RS04160 PF01578 Cytochrome C assembly protein GQS55_RS04165 PF03379 CcmB protein GQS55_RS04170 PF00005 ABC transporter GQS55_RS04175 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GQS55_RS04175 PF01578 Cytochrome C assembly protein GQS55_RS04180 PF08534 Redoxin GQS55_RS04185 PF03918 Cytochrome C biogenesis protein GQS55_RS04195 PF00762 Ferrochelatase GQS55_RS04200 PF11798 IMS family HHH motif GQS55_RS04200 PF00817 impB/mucB/samB family GQS55_RS04200 PF11799 impB/mucB/samB family C-terminal domain GQS55_RS04210 PF02272 DHHA1 domain GQS55_RS04210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GQS55_RS04210 PF01411 tRNA synthetases class II (A) GQS55_RS04215 PF02599 Global regulator protein family GQS55_RS04250 PF00682 HMGL-like GQS55_RS04250 PF00364 Biotin-requiring enzyme GQS55_RS04250 PF02436 Conserved carboxylase domain GQS55_RS04255 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GQS55_RS04265 PF00072 Response regulator receiver domain GQS55_RS04265 PF13188 PAS domain GQS55_RS04265 PF08448 PAS fold GQS55_RS04265 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS04265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS04270 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GQS55_RS04270 PF01243 Pyridoxamine 5'-phosphate oxidase GQS55_RS04280 PF05127 Helicase GQS55_RS04280 PF13718 GNAT acetyltransferase 2 GQS55_RS04295 PF00005 ABC transporter GQS55_RS04310 PF07517 SecA DEAD-like domain GQS55_RS04310 PF02810 SEC-C motif GQS55_RS04310 PF01043 SecA preprotein cross-linking domain GQS55_RS04310 PF07516 SecA Wing and Scaffold domain GQS55_RS04350 PF00072 Response regulator receiver domain GQS55_RS04350 PF01584 CheW-like domain GQS55_RS04355 PF01739 CheR methyltransferase, SAM binding domain GQS55_RS04355 PF03705 CheR methyltransferase, all-alpha domain GQS55_RS04360 PF00460 Flagella basal body rod protein GQS55_RS04365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GQS55_RS04365 PF00460 Flagella basal body rod protein GQS55_RS04370 PF03963 Flagellar hook capping protein - N-terminal region GQS55_RS04375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GQS55_RS04375 PF00460 Flagella basal body rod protein GQS55_RS04375 PF07559 Flagellar basal body protein FlaE GQS55_RS04380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GQS55_RS04380 PF00460 Flagella basal body rod protein GQS55_RS04385 PF00460 Flagella basal body rod protein GQS55_RS04385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GQS55_RS04390 PF02107 Flagellar L-ring protein GQS55_RS04395 PF02119 Flagellar P-ring protein GQS55_RS04400 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GQS55_RS04400 PF10135 Rod binding protein GQS55_RS04405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GQS55_RS04405 PF00460 Flagella basal body rod protein GQS55_RS04410 PF00669 Bacterial flagellin N-terminal helical region GQS55_RS04415 PF00669 Bacterial flagellin N-terminal helical region GQS55_RS04415 PF00700 Bacterial flagellin C-terminal helical region GQS55_RS04415 PF07196 Flagellin hook IN motif GQS55_RS04420 PF00669 Bacterial flagellin N-terminal helical region GQS55_RS04420 PF00700 Bacterial flagellin C-terminal helical region GQS55_RS04420 PF07196 Flagellin hook IN motif GQS55_RS04425 PF07196 Flagellin hook IN motif GQS55_RS04425 PF00669 Bacterial flagellin N-terminal helical region GQS55_RS04425 PF00700 Bacterial flagellin C-terminal helical region GQS55_RS04430 PF03646 FlaG protein GQS55_RS04435 PF02465 Flagellar hook-associated protein 2 N-terminus GQS55_RS04435 PF07195 Flagellar hook-associated protein 2 C-terminus GQS55_RS04435 PF07196 Flagellin hook IN motif GQS55_RS04455 PF01590 GAF domain GQS55_RS04455 PF00158 Sigma-54 interaction domain GQS55_RS04455 PF02954 Bacterial regulatory protein, Fis family GQS55_RS04460 PF00672 HAMP domain GQS55_RS04460 PF18698 Histidine kinase sensor domain GQS55_RS04460 PF00989 PAS fold GQS55_RS04460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS04460 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS04465 PF00158 Sigma-54 interaction domain GQS55_RS04465 PF00072 Response regulator receiver domain GQS55_RS04465 PF02954 Bacterial regulatory protein, Fis family GQS55_RS04470 PF02049 Flagellar hook-basal body complex protein FliE GQS55_RS04475 PF01514 Secretory protein of YscJ/FliF family GQS55_RS04475 PF08345 Flagellar M-ring protein C-terminal GQS55_RS04480 PF14842 FliG N-terminal domain GQS55_RS04480 PF14841 FliG middle domain GQS55_RS04480 PF01706 FliG C-terminal domain GQS55_RS04490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GQS55_RS04490 PF18269 T3SS EscN ATPase C-terminal domain GQS55_RS04500 PF02120 Flagellar hook-length control protein FliK GQS55_RS04510 PF02154 Flagellar motor switch protein FliM GQS55_RS04510 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GQS55_RS04515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GQS55_RS04520 PF04347 Flagellar biosynthesis protein, FliO GQS55_RS04525 PF00813 FliP family GQS55_RS04530 PF01313 Bacterial export proteins, family 3 GQS55_RS04535 PF01311 Bacterial export proteins, family 1 GQS55_RS04540 PF01312 FlhB HrpN YscU SpaS Family GQS55_RS04545 PF00771 FHIPEP family GQS55_RS04550 PF00448 SRP54-type protein, GTPase domain GQS55_RS04555 PF10609 NUBPL iron-transfer P-loop NTPase GQS55_RS04560 PF04542 Sigma-70 region 2 GQS55_RS04560 PF04545 Sigma-70, region 4 GQS55_RS04560 PF04539 Sigma-70 region 3 GQS55_RS04565 PF00072 Response regulator receiver domain GQS55_RS04570 PF04344 Chemotaxis phosphatase, CheZ GQS55_RS04575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS04575 PF07194 P2 response regulator binding domain GQS55_RS04575 PF01584 CheW-like domain GQS55_RS04575 PF02895 Signal transducing histidine kinase, homodimeric domain GQS55_RS04575 PF01627 Hpt domain GQS55_RS04580 PF00072 Response regulator receiver domain GQS55_RS04580 PF01339 CheB methylesterase GQS55_RS04585 PF01618 MotA/TolQ/ExbB proton channel family GQS55_RS04590 PF00691 OmpA family GQS55_RS04590 PF13677 Membrane MotB of proton-channel complex MotA/MotB GQS55_RS04595 PF13614 AAA domain GQS55_RS04605 PF01584 CheW-like domain GQS55_RS04615 PF04333 MlaA lipoprotein GQS55_RS04620 PF00885 6,7-dimethyl-8-ribityllumazine synthase GQS55_RS04625 PF01029 NusB family GQS55_RS04630 PF02769 AIR synthase related protein, C-terminal domain GQS55_RS04630 PF00586 AIR synthase related protein, N-terminal domain GQS55_RS04635 PF04608 Phosphatidylglycerophosphatase A GQS55_RS04650 PF00271 Helicase conserved C-terminal domain GQS55_RS04650 PF00270 DEAD/DEAH box helicase GQS55_RS04650 PF03880 DbpA RNA binding domain GQS55_RS04655 PF03969 AFG1-like ATPase GQS55_RS04670 PF00171 Aldehyde dehydrogenase family GQS55_RS04675 PF03466 LysR substrate binding domain GQS55_RS04675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS04710 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS04710 PF00593 TonB dependent receptor GQS55_RS04735 PF03553 Na+/H+ antiporter family GQS55_RS04740 PF14698 Argininosuccinate lyase C-terminal GQS55_RS04740 PF00206 Lyase GQS55_RS04745 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS04745 PF17158 Membrane-associated sensor, integral membrane domain GQS55_RS04760 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS04760 PF00593 TonB dependent receptor GQS55_RS04795 PF04317 YcjX-like family, DUF463 GQS55_RS04800 PF05128 Domain of unknown function (DUF697) GQS55_RS04805 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GQS55_RS04810 PF01329 Pterin 4 alpha carbinolamine dehydratase GQS55_RS04815 PF18024 Helix-turn-helix domain GQS55_RS04815 PF00158 Sigma-54 interaction domain GQS55_RS04825 PF02798 Glutathione S-transferase, N-terminal domain GQS55_RS04825 PF14497 Glutathione S-transferase, C-terminal domain GQS55_RS04830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GQS55_RS04830 PF01842 ACT domain GQS55_RS04830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GQS55_RS04835 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GQS55_RS04840 PF01812 5-formyltetrahydrofolate cyclo-ligase family GQS55_RS04845 PF00854 POT family GQS55_RS04850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GQS55_RS04850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GQS55_RS04850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GQS55_RS04855 PF01370 NAD dependent epimerase/dehydratase family GQS55_RS04865 PF03279 Bacterial lipid A biosynthesis acyltransferase GQS55_RS04870 PF02321 Outer membrane efflux protein GQS55_RS04875 PF00293 NUDIX domain GQS55_RS04880 PF06853 Protein of unknown function (DUF1249) GQS55_RS04885 PF00149 Calcineurin-like phosphoesterase GQS55_RS04890 PF05728 Uncharacterised protein family (UPF0227) GQS55_RS04895 PF00986 DNA gyrase B subunit, carboxyl terminus GQS55_RS04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS04895 PF01751 Toprim domain GQS55_RS04895 PF00204 DNA gyrase B GQS55_RS04900 PF17151 Periplasmic sensor domain GQS55_RS04900 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS04905 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS04905 PF17158 Membrane-associated sensor, integral membrane domain GQS55_RS04910 PF03989 DNA gyrase C-terminal domain, beta-propeller GQS55_RS04910 PF00521 DNA gyrase/topoisomerase IV, subunit A GQS55_RS04920 PF07670 Nucleoside recognition GQS55_RS04920 PF07664 Ferrous iron transport protein B C terminus GQS55_RS04920 PF02421 Ferrous iron transport protein B GQS55_RS04930 PF13617 YnbE-like lipoprotein GQS55_RS04940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS04940 PF00672 HAMP domain GQS55_RS04940 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS04940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GQS55_RS04940 PF00072 Response regulator receiver domain GQS55_RS04940 PF01627 Hpt domain GQS55_RS04945 PF00072 Response regulator receiver domain GQS55_RS04945 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS04960 PF08769 Sporulation initiation factor Spo0A C terminal GQS55_RS04960 PF00072 Response regulator receiver domain GQS55_RS04965 PF08447 PAS fold GQS55_RS04965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS04970 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS04970 PF00563 EAL domain GQS55_RS04970 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS04975 PF02311 AraC-like ligand binding domain GQS55_RS04975 PF12833 Helix-turn-helix domain GQS55_RS04985 PF00085 Thioredoxin GQS55_RS04995 PF05433 Glycine zipper 2TM domain GQS55_RS05015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS05015 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS05015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS05020 PF01316 Arginine repressor, DNA binding domain GQS55_RS05020 PF02863 Arginine repressor, C-terminal domain GQS55_RS05030 PF06062 Uncharacterised protein family (UPF0231) GQS55_RS05045 PF07690 Major Facilitator Superfamily GQS55_RS05055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GQS55_RS05065 PF05175 Methyltransferase small domain GQS55_RS05070 PF01722 BolA-like protein GQS55_RS05075 PF12241 Trans-2-enoyl-CoA reductase catalytic region GQS55_RS05075 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GQS55_RS05075 PF07055 Enoyl reductase FAD binding domain GQS55_RS05080 PF01590 GAF domain GQS55_RS05080 PF00563 EAL domain GQS55_RS05080 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS05080 PF00360 Phytochrome region GQS55_RS05085 PF11973 NQRA C-terminal domain GQS55_RS05085 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GQS55_RS05090 PF03116 NQR2, RnfD, RnfE family GQS55_RS05095 PF04205 FMN-binding domain GQS55_RS05100 PF02508 Rnf-Nqr subunit, membrane protein GQS55_RS05105 PF02508 Rnf-Nqr subunit, membrane protein GQS55_RS05110 PF00970 Oxidoreductase FAD-binding domain GQS55_RS05110 PF00111 2Fe-2S iron-sulfur cluster binding domain GQS55_RS05110 PF00175 Oxidoreductase NAD-binding domain GQS55_RS05115 PF02424 ApbE family GQS55_RS05125 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GQS55_RS05125 PF02779 Transketolase, pyrimidine binding domain GQS55_RS05125 PF02780 Transketolase, C-terminal domain GQS55_RS05130 PF00348 Polyprenyl synthetase GQS55_RS05135 PF02609 Exonuclease VII small subunit GQS55_RS05140 PF01618 MotA/TolQ/ExbB proton channel family GQS55_RS05145 PF13677 Membrane MotB of proton-channel complex MotA/MotB GQS55_RS05145 PF00691 OmpA family GQS55_RS05150 PF02926 THUMP domain GQS55_RS05150 PF02568 Thiamine biosynthesis protein (ThiI) GQS55_RS05155 PF02558 Ketopantoate reductase PanE/ApbA GQS55_RS05155 PF08546 Ketopantoate reductase PanE/ApbA C terminal GQS55_RS05165 PF04461 Protein of unknown function (DUF520) GQS55_RS05170 PF07237 Protein of unknown function (DUF1428) GQS55_RS05175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GQS55_RS05185 PF03937 Flavinator of succinate dehydrogenase GQS55_RS05195 PF02910 Fumarate reductase flavoprotein C-term GQS55_RS05195 PF00890 FAD binding domain GQS55_RS05200 PF04542 Sigma-70 region 2 GQS55_RS05200 PF08281 Sigma-70, region 4 GQS55_RS05210 PF17188 MucB/RseB C-terminal domain GQS55_RS05210 PF03888 MucB/RseB N-terminal domain GQS55_RS05220 PF06421 GTP-binding protein LepA C-terminus GQS55_RS05220 PF03144 Elongation factor Tu domain 2 GQS55_RS05220 PF00679 Elongation factor G C-terminus GQS55_RS05220 PF00009 Elongation factor Tu GTP binding domain GQS55_RS05225 PF10502 Signal peptidase, peptidase S26 GQS55_RS05230 PF14622 Ribonuclease-III-like GQS55_RS05230 PF00035 Double-stranded RNA binding motif GQS55_RS05235 PF01926 50S ribosome-binding GTPase GQS55_RS05235 PF07650 KH domain GQS55_RS05240 PF11967 Recombination protein O N terminal GQS55_RS05240 PF02565 Recombination protein O C terminal GQS55_RS05245 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GQS55_RS05250 PF01648 4'-phosphopantetheinyl transferase superfamily GQS55_RS05260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GQS55_RS05260 PF00072 Response regulator receiver domain GQS55_RS05260 PF01627 Hpt domain GQS55_RS05260 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS05260 PF00672 HAMP domain GQS55_RS05265 PF01938 TRAM domain GQS55_RS05265 PF05958 tRNA (Uracil-5-)-methyltransferase GQS55_RS05270 PF02824 TGS domain GQS55_RS05270 PF13291 ACT domain GQS55_RS05270 PF04607 Region found in RelA / SpoT proteins GQS55_RS05275 PF03819 MazG nucleotide pyrophosphohydrolase domain GQS55_RS05285 PF04304 Protein of unknown function (DUF454) GQS55_RS05295 PF00117 Glutamine amidotransferase class-I GQS55_RS05295 PF06418 CTP synthase N-terminus GQS55_RS05300 PF00113 Enolase, C-terminal TIM barrel domain GQS55_RS05300 PF03952 Enolase, N-terminal domain GQS55_RS05310 PF04977 Septum formation initiator GQS55_RS05315 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GQS55_RS05320 PF02542 YgbB family GQS55_RS05325 PF01142 tRNA pseudouridine synthase D (TruD) GQS55_RS05330 PF01975 Survival protein SurE GQS55_RS05340 PF09335 SNARE associated Golgi protein GQS55_RS05345 PF01476 LysM domain GQS55_RS05345 PF01551 Peptidase family M23 GQS55_RS05350 PF04542 Sigma-70 region 2 GQS55_RS05350 PF00140 Sigma-70 factor, region 1.2 GQS55_RS05350 PF04539 Sigma-70 region 3 GQS55_RS05350 PF04545 Sigma-70, region 4 GQS55_RS05360 PF00488 MutS domain V GQS55_RS05360 PF01624 MutS domain I GQS55_RS05360 PF05188 MutS domain II GQS55_RS05360 PF05192 MutS domain III GQS55_RS05360 PF05190 MutS family domain IV GQS55_RS05365 PF00154 recA bacterial DNA recombination protein GQS55_RS05370 PF04204 Homoserine O-succinyltransferase GQS55_RS05375 PF02310 B12 binding domain GQS55_RS05375 PF02574 Homocysteine S-methyltransferase GQS55_RS05375 PF02607 B12 binding domain GQS55_RS05375 PF02965 Vitamin B12 dependent methionine synthase, activation domain GQS55_RS05375 PF00809 Pterin binding enzyme GQS55_RS05380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GQS55_RS05380 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus GQS55_RS05385 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region GQS55_RS05385 PF00326 Prolyl oligopeptidase family GQS55_RS05390 PF18073 Rubredoxin metal binding domain GQS55_RS05400 PF18429 Domain of unknown function (DUF5609) GQS55_RS05410 PF01026 TatD related DNase GQS55_RS05415 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GQS55_RS05415 PF02769 AIR synthase related protein, C-terminal domain GQS55_RS05415 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GQS55_RS05420 PF01464 Transglycosylase SLT domain GQS55_RS05420 PF00497 Bacterial extracellular solute-binding proteins, family 3 GQS55_RS05425 PF04231 Endonuclease I GQS55_RS05435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GQS55_RS05440 PF04055 Radical SAM superfamily GQS55_RS05440 PF06969 HemN C-terminal domain GQS55_RS05445 PF01725 Ham1 family GQS55_RS05455 PF02325 YGGT family GQS55_RS05460 PF14748 Pyrroline-5-carboxylate reductase dimerisation GQS55_RS05460 PF03807 NADP oxidoreductase coenzyme F420-dependent GQS55_RS05465 PF01168 Alanine racemase, N-terminal domain GQS55_RS05470 PF00437 Type II/IV secretion system protein GQS55_RS05475 PF00437 Type II/IV secretion system protein GQS55_RS05480 PF00571 CBS domain GQS55_RS05480 PF00478 IMP dehydrogenase / GMP reductase domain GQS55_RS05485 PF00171 Aldehyde dehydrogenase family GQS55_RS05490 PF01865 Protein of unknown function DUF47 GQS55_RS05495 PF01384 Phosphate transporter family GQS55_RS05505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS05505 PF03466 LysR substrate binding domain GQS55_RS05515 PF01274 Malate synthase GQS55_RS05520 PF04172 LrgB-like family GQS55_RS05530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS05530 PF03466 LysR substrate binding domain GQS55_RS05535 PF00463 Isocitrate lyase family GQS55_RS05550 PF01116 Fructose-bisphosphate aldolase class-II GQS55_RS05555 PF00274 Fructose-bisphosphate aldolase class-I GQS55_RS05560 PF00162 Phosphoglycerate kinase GQS55_RS05565 PF04381 Putative exonuclease, RdgC GQS55_RS05570 PF00497 Bacterial extracellular solute-binding proteins, family 3 GQS55_RS05570 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS05575 PF00267 Gram-negative porin GQS55_RS05580 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS05580 PF00072 Response regulator receiver domain GQS55_RS05585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS05585 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS05585 PF00989 PAS fold GQS55_RS05585 PF11808 Phosphate regulon sensor protein PhoR GQS55_RS05590 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GQS55_RS05590 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GQS55_RS05600 PF02016 LD-carboxypeptidase N-terminal domain GQS55_RS05600 PF17676 LD-carboxypeptidase C-terminal domain GQS55_RS05605 PF17961 Bacterial Ig domain GQS55_RS05605 PF17210 SdrD B-like domain GQS55_RS05605 PF00746 LPXTG cell wall anchor motif GQS55_RS05605 PF10425 C-terminus of bacterial fibrinogen-binding adhesin GQS55_RS05605 PF04650 YSIRK type signal peptide GQS55_RS05615 PF00291 Pyridoxal-phosphate dependent enzyme GQS55_RS05620 PF03553 Na+/H+ antiporter family GQS55_RS05630 PF00933 Glycosyl hydrolase family 3 N terminal domain GQS55_RS05640 PF13378 Enolase C-terminal domain-like GQS55_RS05640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GQS55_RS05655 PF01380 SIS domain GQS55_RS05660 PF07075 Protein of unknown function (DUF1343) GQS55_RS05665 PF01418 Helix-turn-helix domain, rpiR family GQS55_RS05665 PF01380 SIS domain GQS55_RS05670 PF00593 TonB dependent receptor GQS55_RS05675 PF00144 Beta-lactamase GQS55_RS05695 PF01464 Transglycosylase SLT domain GQS55_RS05695 PF10145 Phage-related minor tail protein GQS55_RS05695 PF01551 Peptidase family M23 GQS55_RS05715 PF07238 PilZ domain GQS55_RS05720 PF12848 ABC transporter GQS55_RS05720 PF00005 ABC transporter GQS55_RS05730 PF00873 AcrB/AcrD/AcrF family GQS55_RS05735 PF01022 Bacterial regulatory protein, arsR family GQS55_RS05755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GQS55_RS05755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GQS55_RS05760 PF03652 Holliday junction resolvase GQS55_RS05765 PF02622 Uncharacterized ACR, COG1678 GQS55_RS05770 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GQS55_RS05770 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GQS55_RS05775 PF04452 RNA methyltransferase GQS55_RS05785 PF00438 S-adenosylmethionine synthetase, N-terminal domain GQS55_RS05785 PF02772 S-adenosylmethionine synthetase, central domain GQS55_RS05785 PF02773 S-adenosylmethionine synthetase, C-terminal domain GQS55_RS05815 PF13358 DDE superfamily endonuclease GQS55_RS05830 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GQS55_RS05830 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GQS55_RS05835 PF01253 Translation initiation factor SUI1 GQS55_RS05840 PF00766 Electron transfer flavoprotein FAD-binding domain GQS55_RS05840 PF01012 Electron transfer flavoprotein domain GQS55_RS05845 PF01012 Electron transfer flavoprotein domain GQS55_RS05870 PF02464 Competence-damaged protein GQS55_RS05870 PF00994 Probable molybdopterin binding domain GQS55_RS05880 PF00701 Dihydrodipicolinate synthetase family GQS55_RS05885 PF09997 Predicted membrane protein (DUF2238) GQS55_RS05890 PF00849 RNA pseudouridylate synthase GQS55_RS05890 PF01479 S4 domain GQS55_RS05910 PF00750 tRNA synthetases class I (R) GQS55_RS05910 PF03485 Arginyl tRNA synthetase N terminal domain GQS55_RS05910 PF05746 DALR anticodon binding domain GQS55_RS05915 PF00009 Elongation factor Tu GTP binding domain GQS55_RS05915 PF03144 Elongation factor Tu domain 2 GQS55_RS05915 PF16658 Class II release factor RF3, C-terminal domain GQS55_RS05935 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) GQS55_RS05940 PF02547 Queuosine biosynthesis protein GQS55_RS05945 PF01702 Queuine tRNA-ribosyltransferase GQS55_RS05950 PF02699 Preprotein translocase subunit GQS55_RS05955 PF07549 SecD/SecF GG Motif GQS55_RS05955 PF02355 Protein export membrane protein GQS55_RS05955 PF13721 SecD export protein N-terminal TM region GQS55_RS05960 PF02355 Protein export membrane protein GQS55_RS05960 PF07549 SecD/SecF GG Motif GQS55_RS05965 PF00271 Helicase conserved C-terminal domain GQS55_RS05965 PF00270 DEAD/DEAH box helicase GQS55_RS05970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GQS55_RS05970 PF14824 Sirohaem biosynthesis protein central GQS55_RS05970 PF10414 Sirohaem synthase dimerisation region GQS55_RS05975 PF00459 Inositol monophosphatase family GQS55_RS05980 PF00588 SpoU rRNA Methylase family GQS55_RS05985 PF00132 Bacterial transferase hexapeptide (six repeats) GQS55_RS05985 PF06426 Serine acetyltransferase, N-terminal GQS55_RS05990 PF02082 Transcriptional regulator GQS55_RS05995 PF00266 Aminotransferase class-V GQS55_RS06000 PF01592 NifU-like N terminal domain GQS55_RS06005 PF01521 Iron-sulphur cluster biosynthesis GQS55_RS06010 PF07743 HSCB C-terminal oligomerisation domain GQS55_RS06010 PF00226 DnaJ domain GQS55_RS06015 PF00012 Hsp70 protein GQS55_RS06020 PF00111 2Fe-2S iron-sulfur cluster binding domain GQS55_RS06035 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GQS55_RS06035 PF01464 Transglycosylase SLT domain GQS55_RS06040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS06040 PF08447 PAS fold GQS55_RS06060 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS06060 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS06060 PF00563 EAL domain GQS55_RS06065 PF01979 Amidohydrolase family GQS55_RS06070 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS06070 PF00593 TonB dependent receptor GQS55_RS06075 PF04542 Sigma-70 region 2 GQS55_RS06075 PF08281 Sigma-70, region 4 GQS55_RS06085 PF01136 Peptidase family U32 GQS55_RS06085 PF12392 Collagenase GQS55_RS06090 PF05661 Protein of unknown function (DUF808) GQS55_RS06095 PF00873 AcrB/AcrD/AcrF family GQS55_RS06145 PF00849 RNA pseudouridylate synthase GQS55_RS06150 PF01709 Transcriptional regulator GQS55_RS06160 PF01218 Coproporphyrinogen III oxidase GQS55_RS06170 PF01292 Prokaryotic cytochrome b561 GQS55_RS06175 PF03466 LysR substrate binding domain GQS55_RS06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS06190 PF03695 Uncharacterised protein family (UPF0149) GQS55_RS06195 PF00557 Metallopeptidase family M24 GQS55_RS06195 PF05195 Aminopeptidase P, N-terminal domain GQS55_RS06200 PF01494 FAD binding domain GQS55_RS06205 PF01494 FAD binding domain GQS55_RS06210 PF08669 Glycine cleavage T-protein C-terminal barrel domain GQS55_RS06210 PF01571 Aminomethyltransferase folate-binding domain GQS55_RS06215 PF01597 Glycine cleavage H-protein GQS55_RS06220 PF02347 Glycine cleavage system P-protein GQS55_RS06240 PF09905 DNA-binding protein VF530 GQS55_RS06250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GQS55_RS06250 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GQS55_RS06260 PF00271 Helicase conserved C-terminal domain GQS55_RS06260 PF00270 DEAD/DEAH box helicase GQS55_RS06265 PF00072 Response regulator receiver domain GQS55_RS06265 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS06270 PF08402 TOBE domain GQS55_RS06270 PF00005 ABC transporter GQS55_RS06275 PF00528 Binding-protein-dependent transport system inner membrane component GQS55_RS06305 PF02798 Glutathione S-transferase, N-terminal domain GQS55_RS06305 PF00043 Glutathione S-transferase, C-terminal domain GQS55_RS06310 PF03466 LysR substrate binding domain GQS55_RS06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS06315 PF01979 Amidohydrolase family GQS55_RS06330 PF02321 Outer membrane efflux protein GQS55_RS06335 PF00873 AcrB/AcrD/AcrF family GQS55_RS06340 PF00529 HlyD membrane-fusion protein of T1SS GQS55_RS06340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQS55_RS06365 PF00672 HAMP domain GQS55_RS06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS06365 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS06370 PF00072 Response regulator receiver domain GQS55_RS06370 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS06395 PF00892 EamA-like transporter family GQS55_RS06405 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS06405 PF00497 Bacterial extracellular solute-binding proteins, family 3 GQS55_RS06405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS06410 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS06410 PF01590 GAF domain GQS55_RS06410 PF00563 EAL domain GQS55_RS06410 PF00360 Phytochrome region GQS55_RS06435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GQS55_RS06440 PF04389 Peptidase family M28 GQS55_RS06440 PF02225 PA domain GQS55_RS06480 PF00072 Response regulator receiver domain GQS55_RS06480 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS06495 PF00886 Ribosomal protein S16 GQS55_RS06500 PF05239 PRC-barrel domain GQS55_RS06500 PF01782 RimM N-terminal domain GQS55_RS06505 PF01746 tRNA (Guanine-1)-methyltransferase GQS55_RS06510 PF01245 Ribosomal protein L19 GQS55_RS06535 PF00872 Transposase, Mutator family GQS55_RS06540 PF11965 Domain of unknown function (DUF3479) GQS55_RS06540 PF02514 CobN/Magnesium Chelatase GQS55_RS06560 PF00593 TonB dependent receptor GQS55_RS06560 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS06580 PF07732 Multicopper oxidase GQS55_RS06580 PF00394 Multicopper oxidase GQS55_RS06590 PF02630 SCO1/SenC GQS55_RS06610 PF01668 SmpB protein GQS55_RS06615 PF03364 Polyketide cyclase / dehydrase and lipid transport GQS55_RS06620 PF03658 RnfH family Ubiquitin GQS55_RS06640 PF10672 S-adenosylmethionine-dependent methyltransferase GQS55_RS06640 PF01170 Putative RNA methylase family UPF0020 GQS55_RS06640 PF02926 THUMP domain GQS55_RS06685 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS06685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GQS55_RS06695 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS06700 PF00881 Nitroreductase family GQS55_RS06705 PF02803 Thiolase, C-terminal domain GQS55_RS06705 PF00108 Thiolase, N-terminal domain GQS55_RS06710 PF13350 Tyrosine phosphatase family GQS55_RS06725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS06725 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS06725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS06735 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS06735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS06735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS06740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS06740 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS06740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS06745 PF01494 FAD binding domain GQS55_RS06755 PF00392 Bacterial regulatory proteins, gntR family GQS55_RS06755 PF07729 FCD domain GQS55_RS06760 PF13193 AMP-binding enzyme C-terminal domain GQS55_RS06760 PF00501 AMP-binding enzyme GQS55_RS06765 PF00465 Iron-containing alcohol dehydrogenase GQS55_RS06780 PF13193 AMP-binding enzyme C-terminal domain GQS55_RS06780 PF00501 AMP-binding enzyme GQS55_RS06790 PF02233 NAD(P) transhydrogenase beta subunit GQS55_RS06795 PF07690 Major Facilitator Superfamily GQS55_RS06810 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS06810 PF14759 Reductase C-terminal GQS55_RS06830 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS06830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS06830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS06840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GQS55_RS06845 PF12833 Helix-turn-helix domain GQS55_RS06845 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GQS55_RS06880 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS06885 PF02515 CoA-transferase family III GQS55_RS06890 PF00106 short chain dehydrogenase GQS55_RS06895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS06895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS06895 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS06900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GQS55_RS06900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GQS55_RS06900 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS06905 PF02803 Thiolase, C-terminal domain GQS55_RS06905 PF00108 Thiolase, N-terminal domain GQS55_RS06915 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS06920 PF00881 Nitroreductase family GQS55_RS06925 PF00501 AMP-binding enzyme GQS55_RS06925 PF13193 AMP-binding enzyme C-terminal domain GQS55_RS06945 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS06970 PF00501 AMP-binding enzyme GQS55_RS06975 PF00881 Nitroreductase family GQS55_RS06980 PF02803 Thiolase, C-terminal domain GQS55_RS06980 PF00108 Thiolase, N-terminal domain GQS55_RS07010 PF03328 HpcH/HpaI aldolase/citrate lyase family GQS55_RS07015 PF01575 MaoC like domain GQS55_RS07020 PF02515 CoA-transferase family III GQS55_RS07030 PF01557 Fumarylacetoacetate (FAA) hydrolase family GQS55_RS07050 PF00890 FAD binding domain GQS55_RS07055 PF07690 Major Facilitator Superfamily GQS55_RS07060 PF07690 Major Facilitator Superfamily GQS55_RS07065 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS07065 PF00593 TonB dependent receptor GQS55_RS07085 PF00106 short chain dehydrogenase GQS55_RS07100 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS07100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS07100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS07105 PF03466 LysR substrate binding domain GQS55_RS07105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS07125 PF00561 alpha/beta hydrolase fold GQS55_RS07130 PF00107 Zinc-binding dehydrogenase GQS55_RS07130 PF08240 Alcohol dehydrogenase GroES-like domain GQS55_RS07145 PF00561 alpha/beta hydrolase fold GQS55_RS07150 PF00392 Bacterial regulatory proteins, gntR family GQS55_RS07150 PF07729 FCD domain GQS55_RS07155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS07155 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS07155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS07160 PF08240 Alcohol dehydrogenase GroES-like domain GQS55_RS07160 PF13823 Alcohol dehydrogenase GroES-associated GQS55_RS07160 PF00107 Zinc-binding dehydrogenase GQS55_RS07165 PF08240 Alcohol dehydrogenase GroES-like domain GQS55_RS07165 PF00107 Zinc-binding dehydrogenase GQS55_RS07180 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS07220 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS07230 PF03060 Nitronate monooxygenase GQS55_RS07235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GQS55_RS07240 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS07265 PF00392 Bacterial regulatory proteins, gntR family GQS55_RS07265 PF07840 FadR C-terminal domain GQS55_RS07280 PF01012 Electron transfer flavoprotein domain GQS55_RS07285 PF01012 Electron transfer flavoprotein domain GQS55_RS07285 PF00766 Electron transfer flavoprotein FAD-binding domain GQS55_RS07290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS07290 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS07290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS07295 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS07305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GQS55_RS07305 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GQS55_RS07335 PF00694 Aconitase C-terminal domain GQS55_RS07335 PF00330 Aconitase family (aconitate hydratase) GQS55_RS07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS07340 PF03466 LysR substrate binding domain GQS55_RS07345 PF02754 Cysteine-rich domain GQS55_RS07350 PF11870 Domain of unknown function (DUF3390) GQS55_RS07350 PF13183 4Fe-4S dicluster domain GQS55_RS07350 PF02589 LUD domain GQS55_RS07375 PF02222 ATP-grasp domain GQS55_RS07380 PF03466 LysR substrate binding domain GQS55_RS07380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS07385 PF13533 Biotin-lipoyl like GQS55_RS07390 PF00873 AcrB/AcrD/AcrF family GQS55_RS07400 PF00107 Zinc-binding dehydrogenase GQS55_RS07400 PF08240 Alcohol dehydrogenase GroES-like domain GQS55_RS07420 PF08281 Sigma-70, region 4 GQS55_RS07420 PF04542 Sigma-70 region 2 GQS55_RS07430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS07430 PF00989 PAS fold GQS55_RS07430 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS07440 PF12801 4Fe-4S binding domain GQS55_RS07440 PF04205 FMN-binding domain GQS55_RS07445 PF00171 Aldehyde dehydrogenase family GQS55_RS07475 PF00005 ABC transporter GQS55_RS07535 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS07535 PF00593 TonB dependent receptor GQS55_RS07550 PF00005 ABC transporter GQS55_RS07565 PF00196 Bacterial regulatory proteins, luxR family GQS55_RS07565 PF00072 Response regulator receiver domain GQS55_RS07570 PF00005 ABC transporter GQS55_RS07575 PF03880 DbpA RNA binding domain GQS55_RS07575 PF00270 DEAD/DEAH box helicase GQS55_RS07575 PF12343 Cold shock protein DEAD box A GQS55_RS07575 PF00271 Helicase conserved C-terminal domain GQS55_RS07580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GQS55_RS07585 PF00484 Carbonic anhydrase GQS55_RS07600 PF00291 Pyridoxal-phosphate dependent enzyme GQS55_RS07630 PF00929 Exonuclease GQS55_RS07655 PF01641 SelR domain GQS55_RS07655 PF01625 Peptide methionine sulfoxide reductase GQS55_RS07665 PF00892 EamA-like transporter family GQS55_RS07680 PF07152 YaeQ protein GQS55_RS07685 PF00266 Aminotransferase class-V GQS55_RS07690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GQS55_RS07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS07695 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS07695 PF08448 PAS fold GQS55_RS07695 PF13426 PAS domain GQS55_RS07695 PF00072 Response regulator receiver domain GQS55_RS07700 PF08281 Sigma-70, region 4 GQS55_RS07700 PF04542 Sigma-70 region 2 GQS55_RS07705 PF00730 HhH-GPD superfamily base excision DNA repair protein GQS55_RS07705 PF00633 Helix-hairpin-helix motif GQS55_RS07705 PF10576 Iron-sulfur binding domain of endonuclease III GQS55_RS07710 PF02508 Rnf-Nqr subunit, membrane protein GQS55_RS07715 PF04205 FMN-binding domain GQS55_RS07720 PF03116 NQR2, RnfD, RnfE family GQS55_RS07725 PF12838 4Fe-4S dicluster domain GQS55_RS07725 PF10531 SLBB domain GQS55_RS07725 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GQS55_RS07725 PF13375 RnfC Barrel sandwich hybrid domain GQS55_RS07730 PF04060 Putative Fe-S cluster GQS55_RS07735 PF02508 Rnf-Nqr subunit, membrane protein GQS55_RS07750 PF17384 RimP C-terminal SH3 domain GQS55_RS07750 PF02576 RimP N-terminal domain GQS55_RS07755 PF00575 S1 RNA binding domain GQS55_RS07755 PF08529 NusA N-terminal domain GQS55_RS07755 PF13184 NusA-like KH domain GQS55_RS07760 PF11987 Translation-initiation factor 2 GQS55_RS07760 PF08364 Bacterial translation initiation factor IF-2 associated region GQS55_RS07760 PF04760 Translation initiation factor IF-2, N-terminal region GQS55_RS07760 PF00009 Elongation factor Tu GTP binding domain GQS55_RS07765 PF02033 Ribosome-binding factor A GQS55_RS07770 PF01509 TruB family pseudouridylate synthase (N terminal domain) GQS55_RS07770 PF09157 Pseudouridine synthase II TruB, C-terminal GQS55_RS07770 PF16198 tRNA pseudouridylate synthase B C-terminal domain GQS55_RS07775 PF00312 Ribosomal protein S15 GQS55_RS07780 PF01138 3' exoribonuclease family, domain 1 GQS55_RS07780 PF03725 3' exoribonuclease family, domain 2 GQS55_RS07780 PF00575 S1 RNA binding domain GQS55_RS07780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GQS55_RS07780 PF00013 KH domain GQS55_RS07785 PF07719 Tetratricopeptide repeat GQS55_RS07785 PF13181 Tetratricopeptide repeat GQS55_RS07800 PF00266 Aminotransferase class-V GQS55_RS07805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GQS55_RS07805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GQS55_RS07840 PF06071 Protein of unknown function (DUF933) GQS55_RS07840 PF01926 50S ribosome-binding GTPase GQS55_RS07845 PF01195 Peptidyl-tRNA hydrolase GQS55_RS07850 PF14693 Ribosomal protein TL5, C-terminal domain GQS55_RS07850 PF01386 Ribosomal L25p family GQS55_RS07855 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GQS55_RS07855 PF14572 Phosphoribosyl synthetase-associated domain GQS55_RS07860 PF00288 GHMP kinases N terminal domain GQS55_RS07870 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GQS55_RS07870 PF01488 Shikimate / quinate 5-dehydrogenase GQS55_RS07870 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GQS55_RS07875 PF00472 RF-1 domain GQS55_RS07875 PF03462 PCRF domain GQS55_RS07880 PF17827 PrmC N-terminal domain GQS55_RS07880 PF13847 Methyltransferase domain GQS55_RS07885 PF04247 Invasion gene expression up-regulator, SirB GQS55_RS07890 PF13369 Transglutaminase-like superfamily GQS55_RS07900 PF00793 DAHP synthetase I family GQS55_RS07910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS07910 PF03466 LysR substrate binding domain GQS55_RS07920 PF04241 Protein of unknown function (DUF423) GQS55_RS07925 PF01728 FtsJ-like methyltransferase GQS55_RS07925 PF18125 RlmM ferredoxin-like domain GQS55_RS07930 PF18324 Hypothetical protein TT1725 GQS55_RS07930 PF00180 Isocitrate/isopropylmalate dehydrogenase GQS55_RS07940 PF01367 5'-3' exonuclease, C-terminal SAM fold GQS55_RS07940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GQS55_RS07945 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GQS55_RS07945 PF03641 Possible lysine decarboxylase GQS55_RS07945 PF11892 Domain of unknown function (DUF3412) GQS55_RS07950 PF08448 PAS fold GQS55_RS07950 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS07960 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GQS55_RS07960 PF14489 QueF-like protein GQS55_RS07965 PF07348 Syd protein (SUKH-2) GQS55_RS07985 PF07840 FadR C-terminal domain GQS55_RS07985 PF00392 Bacterial regulatory proteins, gntR family GQS55_RS07990 PF02743 Cache domain GQS55_RS07990 PF00672 HAMP domain GQS55_RS07990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS08005 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GQS55_RS08005 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GQS55_RS08010 PF00462 Glutaredoxin GQS55_RS08015 PF10417 C-terminal domain of 1-Cys peroxiredoxin GQS55_RS08015 PF00578 AhpC/TSA family GQS55_RS08020 PF00929 Exonuclease GQS55_RS08025 PF00691 OmpA family GQS55_RS08025 PF18393 MotY N-terminal domain GQS55_RS08030 PF01433 Peptidase family M1 domain GQS55_RS08035 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GQS55_RS08035 PF00749 tRNA synthetases class I (E and Q), catalytic domain GQS55_RS08040 PF01985 CRS1 / YhbY (CRM) domain GQS55_RS08045 PF01728 FtsJ-like methyltransferase GQS55_RS08050 PF01434 Peptidase family M41 GQS55_RS08050 PF06480 FtsH Extracellular GQS55_RS08050 PF17862 AAA+ lid domain GQS55_RS08050 PF00004 ATPase family associated with various cellular activities (AAA) GQS55_RS08055 PF00809 Pterin binding enzyme GQS55_RS08060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GQS55_RS08060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GQS55_RS08060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GQS55_RS08060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GQS55_RS08065 PF00121 Triosephosphate isomerase GQS55_RS08070 PF03840 Preprotein translocase SecG subunit GQS55_RS08080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS08080 PF00672 HAMP domain GQS55_RS08080 PF02743 Cache domain GQS55_RS08090 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS08090 PF00072 Response regulator receiver domain GQS55_RS08090 PF09308 LuxQ, periplasmic GQS55_RS08090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS08095 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS08095 PF00989 PAS fold GQS55_RS08095 PF16736 Single Cache-like GQS55_RS08095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS08100 PF00384 Molybdopterin oxidoreductase GQS55_RS08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS08105 PF03466 LysR substrate binding domain GQS55_RS08150 PF00005 ABC transporter GQS55_RS08150 PF02687 FtsX-like permease family GQS55_RS08150 PF12704 MacB-like periplasmic core domain GQS55_RS08175 PF02333 Phytase GQS55_RS08180 PF00459 Inositol monophosphatase family GQS55_RS08190 PF00072 Response regulator receiver domain GQS55_RS08190 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS08195 PF02702 Osmosensitive K+ channel His kinase sensor domain GQS55_RS08195 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS08195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS08195 PF13493 Domain of unknown function (DUF4118) GQS55_RS08195 PF13492 GAF domain GQS55_RS08200 PF01594 AI-2E family transporter GQS55_RS08275 PF00749 tRNA synthetases class I (E and Q), catalytic domain GQS55_RS08280 PF00270 DEAD/DEAH box helicase GQS55_RS08280 PF00271 Helicase conserved C-terminal domain GQS55_RS08285 PF01645 Conserved region in glutamate synthase GQS55_RS08290 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GQS55_RS08295 PF00005 ABC transporter GQS55_RS08295 PF12848 ABC transporter GQS55_RS08310 PF01548 Transposase GQS55_RS08310 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS08335 PF00175 Oxidoreductase NAD-binding domain GQS55_RS08335 PF00970 Oxidoreductase FAD-binding domain GQS55_RS08335 PF00042 Globin GQS55_RS08340 PF02082 Transcriptional regulator GQS55_RS08355 PF00270 DEAD/DEAH box helicase GQS55_RS08355 PF00271 Helicase conserved C-terminal domain GQS55_RS08360 PF08497 Radical SAM N-terminal GQS55_RS08360 PF04055 Radical SAM superfamily GQS55_RS08360 PF11842 Domain of unknown function (DUF3362) GQS55_RS08370 PF00072 Response regulator receiver domain GQS55_RS08370 PF00196 Bacterial regulatory proteins, luxR family GQS55_RS08375 PF13426 PAS domain GQS55_RS08375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS08375 PF00672 HAMP domain GQS55_RS08375 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS08385 PF12399 Branched-chain amino acid ATP-binding cassette transporter GQS55_RS08385 PF00005 ABC transporter GQS55_RS08395 PF02653 Branched-chain amino acid transport system / permease component GQS55_RS08410 PF00005 ABC transporter GQS55_RS08425 PF00872 Transposase, Mutator family GQS55_RS08430 PF00563 EAL domain GQS55_RS08430 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS08430 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS08435 PF00675 Insulinase (Peptidase family M16) GQS55_RS08435 PF05193 Peptidase M16 inactive domain GQS55_RS08435 PF16187 Middle or third domain of peptidase_M16 GQS55_RS08445 PF01713 Smr domain GQS55_RS08450 PF05175 Methyltransferase small domain GQS55_RS08455 PF01264 Chorismate synthase GQS55_RS08460 PF00011 Hsp20/alpha crystallin family GQS55_RS08465 PF08534 Redoxin GQS55_RS08470 PF04703 FaeA-like protein GQS55_RS08470 PF00072 Response regulator receiver domain GQS55_RS08475 PF05230 MASE2 domain GQS55_RS08475 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS08480 PF00795 Carbon-nitrogen hydrolase GQS55_RS08485 PF00571 CBS domain GQS55_RS08485 PF03471 Transporter associated domain GQS55_RS08490 PF02130 Uncharacterized protein family UPF0054 GQS55_RS08495 PF02562 PhoH-like protein GQS55_RS08500 PF04055 Radical SAM superfamily GQS55_RS08500 PF01938 TRAM domain GQS55_RS08500 PF00919 Uncharacterized protein family UPF0004 GQS55_RS08505 PF01494 FAD binding domain GQS55_RS08510 PF00206 Lyase GQS55_RS08510 PF08328 Adenylosuccinate lyase C-terminal GQS55_RS08515 PF04356 Protein of unknown function (DUF489) GQS55_RS08525 PF00849 RNA pseudouridylate synthase GQS55_RS08530 PF03971 Monomeric isocitrate dehydrogenase GQS55_RS08535 PF00271 Helicase conserved C-terminal domain GQS55_RS08535 PF00270 DEAD/DEAH box helicase GQS55_RS08540 PF00563 EAL domain GQS55_RS08540 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS08540 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS08545 PF07969 Amidohydrolase family GQS55_RS08560 PF01144 Coenzyme A transferase GQS55_RS08565 PF01144 Coenzyme A transferase GQS55_RS08570 PF00682 HMGL-like GQS55_RS08575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GQS55_RS08575 PF02785 Biotin carboxylase C-terminal domain GQS55_RS08575 PF00289 Biotin carboxylase, N-terminal domain GQS55_RS08575 PF00364 Biotin-requiring enzyme GQS55_RS08580 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS08585 PF01039 Carboxyl transferase domain GQS55_RS08590 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS08590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS08590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS08595 PF09278 MerR, DNA binding GQS55_RS08595 PF00376 MerR family regulatory protein GQS55_RS08600 PF00108 Thiolase, N-terminal domain GQS55_RS08600 PF02803 Thiolase, C-terminal domain GQS55_RS08610 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS08615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GQS55_RS08615 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GQS55_RS08645 PF13358 DDE superfamily endonuclease GQS55_RS08655 PF03466 LysR substrate binding domain GQS55_RS08655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS08670 PF00850 Histone deacetylase domain GQS55_RS08675 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain GQS55_RS08675 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain GQS55_RS08690 PF14602 Hexapeptide repeat of succinyl-transferase GQS55_RS08690 PF12464 Maltose acetyltransferase GQS55_RS08705 PF01844 HNH endonuclease GQS55_RS08725 PF00075 RNase H GQS55_RS08740 PF01926 50S ribosome-binding GTPase GQS55_RS08760 PF00440 Bacterial regulatory proteins, tetR family GQS55_RS08765 PF02600 Disulfide bond formation protein DsbB GQS55_RS08770 PF03600 Citrate transporter GQS55_RS08775 PF16177 Acetyl-coenzyme A synthetase N-terminus GQS55_RS08775 PF00501 AMP-binding enzyme GQS55_RS08775 PF13193 AMP-binding enzyme C-terminal domain GQS55_RS08795 PF08787 Alginate lyase GQS55_RS08805 PF01618 MotA/TolQ/ExbB proton channel family GQS55_RS08810 PF01618 MotA/TolQ/ExbB proton channel family GQS55_RS08815 PF02472 Biopolymer transport protein ExbD/TolR GQS55_RS08820 PF03544 Gram-negative bacterial TonB protein C-terminal GQS55_RS08835 PF02142 MGS-like domain GQS55_RS08840 PF18381 YcaO cyclodehydratase C-terminal domain GQS55_RS08840 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding GQS55_RS08850 PF02254 TrkA-N domain GQS55_RS08850 PF00999 Sodium/hydrogen exchanger family GQS55_RS08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS08865 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS08865 PF16736 Single Cache-like GQS55_RS08865 PF00989 PAS fold GQS55_RS08870 PF02080 TrkA-C domain GQS55_RS08870 PF03600 Citrate transporter GQS55_RS08875 PF01022 Bacterial regulatory protein, arsR family GQS55_RS08885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GQS55_RS08885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GQS55_RS08895 PF00999 Sodium/hydrogen exchanger family GQS55_RS08895 PF02254 TrkA-N domain GQS55_RS08900 PF13472 GDSL-like Lipase/Acylhydrolase family GQS55_RS08905 PF00005 ABC transporter GQS55_RS08915 PF01594 AI-2E family transporter GQS55_RS08935 PF03793 PASTA domain GQS55_RS08935 PF00069 Protein kinase domain GQS55_RS08950 PF13677 Membrane MotB of proton-channel complex MotA/MotB GQS55_RS08950 PF00691 OmpA family GQS55_RS09010 PF10431 C-terminal, D2-small domain, of ClpB protein GQS55_RS09010 PF07724 AAA domain (Cdc48 subfamily) GQS55_RS09010 PF17871 AAA lid domain GQS55_RS09010 PF00004 ATPase family associated with various cellular activities (AAA) GQS55_RS09020 PF04717 Type VI secretion system, phage-baseplate injector GQS55_RS09045 PF03527 RHS protein GQS55_RS09045 PF05593 RHS Repeat GQS55_RS09085 PF03795 YCII-related domain GQS55_RS09090 PF04279 Intracellular septation protein A GQS55_RS09100 PF00268 Ribonucleotide reductase, small chain GQS55_RS09105 PF02867 Ribonucleotide reductase, barrel domain GQS55_RS09105 PF03477 ATP cone domain GQS55_RS09105 PF00317 Ribonucleotide reductase, all-alpha domain GQS55_RS09115 PF03989 DNA gyrase C-terminal domain, beta-propeller GQS55_RS09115 PF00521 DNA gyrase/topoisomerase IV, subunit A GQS55_RS09120 PF00266 Aminotransferase class-V GQS55_RS09125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GQS55_RS09130 PF02224 Cytidylate kinase GQS55_RS09135 PF00575 S1 RNA binding domain GQS55_RS09140 PF00216 Bacterial DNA-binding protein GQS55_RS09150 PF18073 Rubredoxin metal binding domain GQS55_RS09155 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GQS55_RS09160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GQS55_RS09160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GQS55_RS09165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GQS55_RS09165 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GQS55_RS09170 PF01641 SelR domain GQS55_RS09185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GQS55_RS09185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GQS55_RS09190 PF04358 DsrC like protein GQS55_RS09200 PF02635 DsrE/DsrF-like family GQS55_RS09205 PF02635 DsrE/DsrF-like family GQS55_RS09210 PF01027 Inhibitor of apoptosis-promoting Bax1 GQS55_RS09215 PF13673 Acetyltransferase (GNAT) domain GQS55_RS09215 PF13302 Acetyltransferase (GNAT) domain GQS55_RS09215 PF03352 Methyladenine glycosylase GQS55_RS09215 PF00117 Glutamine amidotransferase class-I GQS55_RS09215 PF00958 GMP synthase C terminal domain GQS55_RS09235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GQS55_RS09235 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS09240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS09240 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS09240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS09255 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS09255 PF12806 Acetyl-CoA dehydrogenase C-terminal like GQS55_RS09255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS09255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS09265 PF00106 short chain dehydrogenase GQS55_RS09270 PF02803 Thiolase, C-terminal domain GQS55_RS09270 PF00108 Thiolase, N-terminal domain GQS55_RS09275 PF13193 AMP-binding enzyme C-terminal domain GQS55_RS09275 PF00501 AMP-binding enzyme GQS55_RS09280 PF16884 N-terminal domain of oxidoreductase GQS55_RS09280 PF00107 Zinc-binding dehydrogenase GQS55_RS09285 PF00561 alpha/beta hydrolase fold GQS55_RS09290 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS09300 PF01758 Sodium Bile acid symporter family GQS55_RS09310 PF00561 alpha/beta hydrolase fold GQS55_RS09315 PF00881 Nitroreductase family GQS55_RS09320 PF12806 Acetyl-CoA dehydrogenase C-terminal like GQS55_RS09320 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS09320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS09320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS09345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQS55_RS09345 PF00529 HlyD membrane-fusion protein of T1SS GQS55_RS09350 PF00873 AcrB/AcrD/AcrF family GQS55_RS09355 PF16916 Dimerisation domain of Zinc Transporter GQS55_RS09355 PF01545 Cation efflux family GQS55_RS09360 PF02796 Helix-turn-helix domain of resolvase GQS55_RS09360 PF00239 Resolvase, N terminal domain GQS55_RS09365 PF01526 Tn3 transposase DDE domain GQS55_RS09365 PF13700 Domain of unknown function (DUF4158) GQS55_RS09375 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS09375 PF01548 Transposase GQS55_RS09400 PF01548 Transposase GQS55_RS09400 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS09445 PF00360 Phytochrome region GQS55_RS09445 PF00563 EAL domain GQS55_RS09445 PF01590 GAF domain GQS55_RS09445 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS09465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GQS55_RS09475 PF02810 SEC-C motif GQS55_RS09480 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region GQS55_RS09480 PF00326 Prolyl oligopeptidase family GQS55_RS09495 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS09495 PF00593 TonB dependent receptor GQS55_RS09500 PF01451 Low molecular weight phosphotyrosine protein phosphatase GQS55_RS09535 PF01625 Peptide methionine sulfoxide reductase GQS55_RS09540 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain GQS55_RS09540 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain GQS55_RS09545 PF00672 HAMP domain GQS55_RS09545 PF02743 Cache domain GQS55_RS09545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS09570 PF01926 50S ribosome-binding GTPase GQS55_RS09570 PF13167 GTP-binding GTPase N-terminal GQS55_RS09570 PF16360 GTP-binding GTPase Middle Region GQS55_RS09575 PF00793 DAHP synthetase I family GQS55_RS09580 PF03618 Kinase/pyrophosphorylase GQS55_RS09585 PF00391 PEP-utilising enzyme, mobile domain GQS55_RS09585 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GQS55_RS09585 PF02896 PEP-utilising enzyme, TIM barrel domain GQS55_RS09600 PF00563 EAL domain GQS55_RS09600 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS09600 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS09605 PF04073 Aminoacyl-tRNA editing domain GQS55_RS09610 PF00149 Calcineurin-like phosphoesterase GQS55_RS09610 PF12320 Type 5 capsule protein repressor C-terminal domain GQS55_RS09615 PF13476 AAA domain GQS55_RS09625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GQS55_RS09630 PF01979 Amidohydrolase family GQS55_RS09650 PF00999 Sodium/hydrogen exchanger family GQS55_RS09650 PF02254 TrkA-N domain GQS55_RS09655 PF17946 RecC C-terminal domain GQS55_RS09660 PF13361 UvrD-like helicase C-terminal domain GQS55_RS09660 PF12705 PD-(D/E)XK nuclease superfamily GQS55_RS09660 PF00580 UvrD/REP helicase N-terminal domain GQS55_RS09665 PF13538 UvrD-like helicase C-terminal domain GQS55_RS09675 PF01176 Translation initiation factor 1A / IF-1 GQS55_RS09680 PF04376 Arginine-tRNA-protein transferase, N terminus GQS55_RS09680 PF04377 Arginine-tRNA-protein transferase, C terminus GQS55_RS09685 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GQS55_RS09690 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS09695 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GQS55_RS09695 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GQS55_RS09700 PF01037 Lrp/AsnC ligand binding domain GQS55_RS09705 PF09397 Ftsk gamma domain GQS55_RS09705 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GQS55_RS09705 PF01580 FtsK/SpoIIIE family GQS55_RS09705 PF17854 FtsK alpha domain GQS55_RS09710 PF03548 Outer membrane lipoprotein carrier protein LolA GQS55_RS09715 PF00004 ATPase family associated with various cellular activities (AAA) GQS55_RS09715 PF16193 AAA C-terminal domain GQS55_RS09715 PF12002 MgsA AAA+ ATPase C terminal GQS55_RS09720 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GQS55_RS09725 PF02403 Seryl-tRNA synthetase N-terminal domain GQS55_RS09725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GQS55_RS09735 PF18027 Cytosolic carboxypeptidase N-terminal domain GQS55_RS09735 PF00246 Zinc carboxypeptidase GQS55_RS09740 PF01235 Sodium:alanine symporter family GQS55_RS09760 PF00710 Asparaginase, N-terminal GQS55_RS09760 PF17763 Glutaminase/Asparaginase C-terminal domain GQS55_RS09775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS09775 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS09775 PF00072 Response regulator receiver domain GQS55_RS09775 PF09308 LuxQ, periplasmic GQS55_RS09780 PF00072 Response regulator receiver domain GQS55_RS09785 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS09785 PF00360 Phytochrome region GQS55_RS09785 PF08446 PAS fold GQS55_RS09785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS09785 PF01590 GAF domain GQS55_RS09795 PF00158 Sigma-54 interaction domain GQS55_RS09795 PF02954 Bacterial regulatory protein, Fis family GQS55_RS09795 PF00072 Response regulator receiver domain GQS55_RS09820 PF00152 tRNA synthetases class II (D, K and N) GQS55_RS09820 PF01336 OB-fold nucleic acid binding domain GQS55_RS09830 PF04055 Radical SAM superfamily GQS55_RS09830 PF06968 Biotin and Thiamin Synthesis associated domain GQS55_RS09835 PF12697 Alpha/beta hydrolase family GQS55_RS09835 PF08241 Methyltransferase domain GQS55_RS09850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GQS55_RS09850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GQS55_RS09855 PF02230 Phospholipase/Carboxylesterase GQS55_RS09865 PF01037 Lrp/AsnC ligand binding domain GQS55_RS09870 PF01810 LysE type translocator GQS55_RS09905 PF12697 Alpha/beta hydrolase family GQS55_RS09920 PF14497 Glutathione S-transferase, C-terminal domain GQS55_RS09920 PF02798 Glutathione S-transferase, N-terminal domain GQS55_RS09935 PF00583 Acetyltransferase (GNAT) family GQS55_RS09955 PF01925 Sulfite exporter TauE/SafE GQS55_RS09965 PF01156 Inosine-uridine preferring nucleoside hydrolase GQS55_RS09970 PF00326 Prolyl oligopeptidase family GQS55_RS09980 PF01272 Transcription elongation factor, GreA/GreB, C-term GQS55_RS09980 PF14760 Rnk N-terminus GQS55_RS10005 PF03775 Septum formation inhibitor MinC, C-terminal domain GQS55_RS10005 PF05209 Septum formation inhibitor MinC, N-terminal domain GQS55_RS10010 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GQS55_RS10015 PF03776 Septum formation topological specificity factor MinE GQS55_RS10020 PF01565 FAD binding domain GQS55_RS10020 PF09330 D-lactate dehydrogenase, membrane binding GQS55_RS10050 PF01420 Type I restriction modification DNA specificity domain GQS55_RS10125 PF04002 RadC-like JAB domain GQS55_RS10150 PF04231 Endonuclease I GQS55_RS10165 PF00089 Trypsin GQS55_RS10175 PF00589 Phage integrase family GQS55_RS10185 PF04002 RadC-like JAB domain GQS55_RS10205 PF13438 Domain of unknown function (DUF4113) GQS55_RS10205 PF00817 impB/mucB/samB family GQS55_RS10205 PF11799 impB/mucB/samB family C-terminal domain GQS55_RS10210 PF00717 Peptidase S24-like GQS55_RS10215 PF13356 Arm DNA-binding domain GQS55_RS10215 PF00589 Phage integrase family GQS55_RS10230 PF07208 Protein of unknown function (DUF1414) GQS55_RS10235 PF04245 37-kD nucleoid-associated bacterial protein GQS55_RS10240 PF01979 Amidohydrolase family GQS55_RS10250 PF01551 Peptidase family M23 GQS55_RS10250 PF08460 Bacterial SH3 domain GQS55_RS10275 PF02899 Phage integrase, N-terminal SAM-like domain GQS55_RS10275 PF00589 Phage integrase family GQS55_RS10300 PF00593 TonB dependent receptor GQS55_RS10300 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS10320 PF00294 pfkB family carbohydrate kinase GQS55_RS10360 PF00480 ROK family GQS55_RS10365 PF07470 Glycosyl Hydrolase Family 88 GQS55_RS10370 PF00356 Bacterial regulatory proteins, lacI family GQS55_RS10375 PF03480 Bacterial extracellular solute-binding protein, family 7 GQS55_RS10380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GQS55_RS10385 PF00342 Phosphoglucose isomerase GQS55_RS10395 PF00872 Transposase, Mutator family GQS55_RS10400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS10400 PF03466 LysR substrate binding domain GQS55_RS10410 PF04954 Siderophore-interacting protein GQS55_RS10410 PF08021 Siderophore-interacting FAD-binding domain GQS55_RS10430 PF00155 Aminotransferase class I and II GQS55_RS10440 PF08668 HDOD domain GQS55_RS10440 PF00563 EAL domain GQS55_RS10455 PF01925 Sulfite exporter TauE/SafE GQS55_RS10465 PF08267 Cobalamin-independent synthase, N-terminal domain GQS55_RS10465 PF01717 Cobalamin-independent synthase, Catalytic domain GQS55_RS10480 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS10480 PF01548 Transposase GQS55_RS10505 PF01548 Transposase GQS55_RS10505 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS10515 PF04191 Phospholipid methyltransferase GQS55_RS10535 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS10535 PF01548 Transposase GQS55_RS10540 PF00296 Luciferase-like monooxygenase GQS55_RS10590 PF00793 DAHP synthetase I family GQS55_RS10595 PF00962 Adenosine/AMP deaminase GQS55_RS10600 PF01048 Phosphorylase superfamily GQS55_RS10605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS10605 PF03466 LysR substrate binding domain GQS55_RS10610 PF01810 LysE type translocator GQS55_RS10615 PF01676 Metalloenzyme superfamily GQS55_RS10620 PF00485 Phosphoribulokinase / Uridine kinase family GQS55_RS10625 PF01773 Na+ dependent nucleoside transporter N-terminus GQS55_RS10625 PF07670 Nucleoside recognition GQS55_RS10625 PF07662 Na+ dependent nucleoside transporter C-terminus GQS55_RS10630 PF01791 DeoC/LacD family aldolase GQS55_RS10635 PF00265 Thymidine kinase GQS55_RS10665 PF13473 Cupredoxin-like domain GQS55_RS10670 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS10670 PF08521 Two-component sensor kinase N-terminal GQS55_RS10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS10675 PF00072 Response regulator receiver domain GQS55_RS10675 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS10680 PF02424 ApbE family GQS55_RS10695 PF00578 AhpC/TSA family GQS55_RS10700 PF00733 Asparagine synthase GQS55_RS10700 PF13537 Glutamine amidotransferase domain GQS55_RS10705 PF00072 Response regulator receiver domain GQS55_RS10705 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS10725 PF01180 Dihydroorotate dehydrogenase GQS55_RS10730 PF05088 Bacterial NAD-glutamate dehydrogenase GQS55_RS10740 PF14870 Photosynthesis system II assembly factor YCF48 GQS55_RS10745 PF07044 Protein of unknown function (DUF1329) GQS55_RS10760 PF01433 Peptidase family M1 domain GQS55_RS10760 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GQS55_RS10760 PF11940 Domain of unknown function (DUF3458) Ig-like fold GQS55_RS10770 PF17804 Tail specific protease N-terminal domain GQS55_RS10770 PF03572 Peptidase family S41 GQS55_RS10770 PF00595 PDZ domain GQS55_RS10770 PF11818 C-terminal domain of tail specific protease (DUF3340) GQS55_RS10775 PF17516 ProQ C-terminal domain GQS55_RS10775 PF04352 ProQ/FINO family GQS55_RS10785 PF13185 GAF domain GQS55_RS10800 PF04303 PrpF protein GQS55_RS10805 PF00330 Aconitase family (aconitate hydratase) GQS55_RS10805 PF00694 Aconitase C-terminal domain GQS55_RS10810 PF00285 Citrate synthase, C-terminal domain GQS55_RS10820 PF07729 FCD domain GQS55_RS10820 PF00392 Bacterial regulatory proteins, gntR family GQS55_RS10845 PF01933 Uncharacterised protein family UPF0052 GQS55_RS10850 PF00692 dUTPase GQS55_RS10855 PF10609 NUBPL iron-transfer P-loop NTPase GQS55_RS10860 PF01588 Putative tRNA binding domain GQS55_RS10860 PF09334 tRNA synthetases class I (M) GQS55_RS10875 PF18389 TrmO C-terminal domain GQS55_RS10875 PF01980 tRNA-methyltransferase O GQS55_RS10890 PF00082 Subtilase family GQS55_RS10890 PF05922 Peptidase inhibitor I9 GQS55_RS10895 PF00892 EamA-like transporter family GQS55_RS10900 PF00465 Iron-containing alcohol dehydrogenase GQS55_RS10905 PF00326 Prolyl oligopeptidase family GQS55_RS10905 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GQS55_RS10910 PF00085 Thioredoxin GQS55_RS10915 PF04055 Radical SAM superfamily GQS55_RS10915 PF06969 HemN C-terminal domain GQS55_RS10925 PF07517 SecA DEAD-like domain GQS55_RS10925 PF07516 SecA Wing and Scaffold domain GQS55_RS10925 PF02810 SEC-C motif GQS55_RS10925 PF01043 SecA preprotein cross-linking domain GQS55_RS10930 PF00563 EAL domain GQS55_RS10930 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS10930 PF08447 PAS fold GQS55_RS10930 PF08448 PAS fold GQS55_RS10940 PF07995 Glucose / Sorbosone dehydrogenase GQS55_RS10945 PF12729 Four helix bundle sensory module for signal transduction GQS55_RS10945 PF00672 HAMP domain GQS55_RS10945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS10960 PF05114 Protein of unknown function (DUF692) GQS55_RS10975 PF00593 TonB dependent receptor GQS55_RS10975 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS10980 PF03889 Alternative ribosome-rescue factor A GQS55_RS11010 PF08281 Sigma-70, region 4 GQS55_RS11010 PF04542 Sigma-70 region 2 GQS55_RS11055 PF01177 Asp/Glu/Hydantoin racemase GQS55_RS11065 PF00557 Metallopeptidase family M24 GQS55_RS11105 PF01882 Protein of unknown function DUF58 GQS55_RS11110 PF17863 AAA lid domain GQS55_RS11110 PF07726 ATPase family associated with various cellular activities (AAA) GQS55_RS11120 PF01523 Putative modulator of DNA gyrase GQS55_RS11125 PF01523 Putative modulator of DNA gyrase GQS55_RS11130 PF03372 Endonuclease/Exonuclease/phosphatase family GQS55_RS11135 PF13847 Methyltransferase domain GQS55_RS11150 PF03960 ArsC family GQS55_RS11155 PF01546 Peptidase family M20/M25/M40 GQS55_RS11155 PF07687 Peptidase dimerisation domain GQS55_RS11160 PF02557 D-alanyl-D-alanine carboxypeptidase GQS55_RS11170 PF13426 PAS domain GQS55_RS11170 PF08448 PAS fold GQS55_RS11170 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS11170 PF00072 Response regulator receiver domain GQS55_RS11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS11195 PF01842 ACT domain GQS55_RS11215 PF00578 AhpC/TSA family GQS55_RS11240 PF00578 AhpC/TSA family GQS55_RS11255 PF01223 DNA/RNA non-specific endonuclease GQS55_RS11295 PF01256 Carbohydrate kinase GQS55_RS11295 PF03853 YjeF-related protein N-terminus GQS55_RS11300 PF02233 NAD(P) transhydrogenase beta subunit GQS55_RS11305 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GQS55_RS11305 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GQS55_RS11305 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GQS55_RS11310 PF00107 Zinc-binding dehydrogenase GQS55_RS11310 PF08240 Alcohol dehydrogenase GroES-like domain GQS55_RS11315 PF00171 Aldehyde dehydrogenase family GQS55_RS11325 PF00072 Response regulator receiver domain GQS55_RS11325 PF00196 Bacterial regulatory proteins, luxR family GQS55_RS11330 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS11330 PF00989 PAS fold GQS55_RS11330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS11335 PF01594 AI-2E family transporter GQS55_RS11345 PF13181 Tetratricopeptide repeat GQS55_RS11345 PF01435 Peptidase family M48 GQS55_RS11350 PF03960 ArsC family GQS55_RS11365 PF00672 HAMP domain GQS55_RS11365 PF17200 Single Cache domain 2 GQS55_RS11365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS11370 PF01557 Fumarylacetoacetate (FAA) hydrolase family GQS55_RS11375 PF00308 Bacterial dnaA protein GQS55_RS11385 PF02769 AIR synthase related protein, C-terminal domain GQS55_RS11385 PF00586 AIR synthase related protein, N-terminal domain GQS55_RS11390 PF00551 Formyl transferase GQS55_RS11400 PF13230 Glutamine amidotransferases class-II GQS55_RS11405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS11405 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS11405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS11405 PF09317 Domain of unknown function (DUF1974) GQS55_RS11415 PF00216 Bacterial DNA-binding protein GQS55_RS11420 PF03483 B3/4 domain GQS55_RS11420 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GQS55_RS11420 PF03484 tRNA synthetase B5 domain GQS55_RS11420 PF01588 Putative tRNA binding domain GQS55_RS11420 PF03147 Ferredoxin-fold anticodon binding domain GQS55_RS11425 PF01409 tRNA synthetases class II core domain (F) GQS55_RS11425 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GQS55_RS11430 PF03264 NapC/NirT cytochrome c family, N-terminal region GQS55_RS11435 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) GQS55_RS11440 PF01568 Molydopterin dinucleotide binding domain GQS55_RS11440 PF00384 Molybdopterin oxidoreductase GQS55_RS11440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GQS55_RS11450 PF13187 4Fe-4S dicluster domain GQS55_RS11450 PF12838 4Fe-4S dicluster domain GQS55_RS11455 PF06796 Periplasmic nitrate reductase protein NapE GQS55_RS11465 PF02913 FAD linked oxidases, C-terminal domain GQS55_RS11465 PF01565 FAD binding domain GQS55_RS11465 PF13183 4Fe-4S dicluster domain GQS55_RS11470 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS11470 PF00563 EAL domain GQS55_RS11470 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS11475 PF01168 Alanine racemase, N-terminal domain GQS55_RS11475 PF00842 Alanine racemase, C-terminal domain GQS55_RS11480 PF04055 Radical SAM superfamily GQS55_RS11485 PF06508 Queuosine biosynthesis protein QueC GQS55_RS11490 PF00520 Ion transport protein GQS55_RS11490 PF00027 Cyclic nucleotide-binding domain GQS55_RS11495 PF17757 UvrB interaction domain GQS55_RS11495 PF00271 Helicase conserved C-terminal domain GQS55_RS11495 PF04851 Type III restriction enzyme, res subunit GQS55_RS11495 PF12344 Ultra-violet resistance protein B GQS55_RS11495 PF02151 UvrB/uvrC motif GQS55_RS11500 PF01554 MatE GQS55_RS11525 PF00226 DnaJ domain GQS55_RS11525 PF01556 DnaJ C terminal domain GQS55_RS11535 PF13396 Phospholipase_D-nuclease N-terminal GQS55_RS11535 PF13091 PLD-like domain GQS55_RS11540 PF07724 AAA domain (Cdc48 subfamily) GQS55_RS11540 PF10431 C-terminal, D2-small domain, of ClpB protein GQS55_RS11540 PF17871 AAA lid domain GQS55_RS11540 PF00004 ATPase family associated with various cellular activities (AAA) GQS55_RS11540 PF02861 Clp amino terminal domain, pathogenicity island component GQS55_RS11545 PF02617 ATP-dependent Clp protease adaptor protein ClpS GQS55_RS11550 PF00313 'Cold-shock' DNA-binding domain GQS55_RS11560 PF00270 DEAD/DEAH box helicase GQS55_RS11560 PF00271 Helicase conserved C-terminal domain GQS55_RS11560 PF11898 Domain of unknown function (DUF3418) GQS55_RS11560 PF04408 Helicase associated domain (HA2) GQS55_RS11560 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GQS55_RS11565 PF00478 IMP dehydrogenase / GMP reductase domain GQS55_RS11565 PF00571 CBS domain GQS55_RS11570 PF01063 Amino-transferase class IV GQS55_RS11580 PF02626 Carboxyltransferase domain, subdomain A and B GQS55_RS11585 PF02682 Carboxyltransferase domain, subdomain C and D GQS55_RS11590 PF03746 LamB/YcsF family GQS55_RS11595 PF07286 Protein of unknown function (DUF1445) GQS55_RS11600 PF02253 Phospholipase A1 GQS55_RS11615 PF04986 Putative transposase GQS55_RS11615 PF14319 Transposase zinc-binding domain GQS55_RS11620 PF00072 Response regulator receiver domain GQS55_RS11620 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS11625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS11625 PF00672 HAMP domain GQS55_RS11625 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS11630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQS55_RS11635 PF00005 ABC transporter GQS55_RS11635 PF12704 MacB-like periplasmic core domain GQS55_RS11635 PF02687 FtsX-like permease family GQS55_RS11640 PF01863 Protein of unknown function DUF45 GQS55_RS11645 PF00593 TonB dependent receptor GQS55_RS11645 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS11650 PF09423 PhoD-like phosphatase GQS55_RS11650 PF16655 PhoD-like phosphatase, N-terminal domain GQS55_RS11660 PF06100 MCRA family GQS55_RS11665 PF00873 AcrB/AcrD/AcrF family GQS55_RS11670 PF00529 HlyD membrane-fusion protein of T1SS GQS55_RS11670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQS55_RS11680 PF13411 MerR HTH family regulatory protein GQS55_RS11685 PF00107 Zinc-binding dehydrogenase GQS55_RS11685 PF16884 N-terminal domain of oxidoreductase GQS55_RS11690 PF00465 Iron-containing alcohol dehydrogenase GQS55_RS11700 PF03466 LysR substrate binding domain GQS55_RS11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS11710 PF00756 Putative esterase GQS55_RS11710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GQS55_RS11715 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS11715 PF00593 TonB dependent receptor GQS55_RS11740 PF00005 ABC transporter GQS55_RS11740 PF08402 TOBE domain GQS55_RS11745 PF00072 Response regulator receiver domain GQS55_RS11745 PF00196 Bacterial regulatory proteins, luxR family GQS55_RS11750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS11750 PF07730 Histidine kinase GQS55_RS11750 PF05231 MASE1 GQS55_RS11755 PF00696 Amino acid kinase family GQS55_RS11755 PF01842 ACT domain GQS55_RS11760 PF02698 DUF218 domain GQS55_RS11765 PF00180 Isocitrate/isopropylmalate dehydrogenase GQS55_RS11770 PF02233 NAD(P) transhydrogenase beta subunit GQS55_RS11775 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GQS55_RS11775 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GQS55_RS11775 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GQS55_RS11790 PF03692 Putative zinc- or iron-chelating domain GQS55_RS11795 PF13406 Transglycosylase SLT domain GQS55_RS11800 PF05166 YcgL domain GQS55_RS11810 PF01612 3'-5' exonuclease GQS55_RS11810 PF00570 HRDC domain GQS55_RS11815 PF01479 S4 domain GQS55_RS11815 PF00849 RNA pseudouridylate synthase GQS55_RS11820 PF01300 Telomere recombination GQS55_RS11825 PF02811 PHP domain GQS55_RS11830 PF00425 chorismate binding enzyme GQS55_RS11830 PF04715 Anthranilate synthase component I, N terminal region GQS55_RS11835 PF00117 Glutamine amidotransferase class-I GQS55_RS11840 PF02885 Glycosyl transferase family, helical bundle domain GQS55_RS11840 PF00591 Glycosyl transferase family, a/b domain GQS55_RS11845 PF00218 Indole-3-glycerol phosphate synthase GQS55_RS11845 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GQS55_RS11850 PF00291 Pyridoxal-phosphate dependent enzyme GQS55_RS11855 PF00290 Tryptophan synthase alpha chain GQS55_RS11885 PF12327 FtsZ family, C-terminal domain GQS55_RS11885 PF00091 Tubulin/FtsZ family, GTPase domain GQS55_RS11900 PF13356 Arm DNA-binding domain GQS55_RS11900 PF00589 Phage integrase family GQS55_RS11905 PF08411 Exonuclease C-terminal GQS55_RS11905 PF00929 Exonuclease GQS55_RS11910 PF02954 Bacterial regulatory protein, Fis family GQS55_RS11910 PF00072 Response regulator receiver domain GQS55_RS11910 PF00158 Sigma-54 interaction domain GQS55_RS11915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS11915 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS11915 PF02743 Cache domain GQS55_RS11925 PF00939 Sodium:sulfate symporter transmembrane region GQS55_RS11930 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GQS55_RS11930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GQS55_RS11945 PF00255 Glutathione peroxidase GQS55_RS11950 PF01047 MarR family GQS55_RS11960 PF02254 TrkA-N domain GQS55_RS11960 PF00999 Sodium/hydrogen exchanger family GQS55_RS11975 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS11975 PF00593 TonB dependent receptor GQS55_RS11980 PF13520 Amino acid permease GQS55_RS12000 PF00762 Ferrochelatase GQS55_RS12015 PF01965 DJ-1/PfpI family GQS55_RS12030 PF00919 Uncharacterized protein family UPF0004 GQS55_RS12030 PF18693 TRAM domain GQS55_RS12030 PF04055 Radical SAM superfamily GQS55_RS12065 PF01053 Cys/Met metabolism PLP-dependent enzyme GQS55_RS12075 PF00563 EAL domain GQS55_RS12075 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS12075 PF13426 PAS domain GQS55_RS12085 PF00072 Response regulator receiver domain GQS55_RS12085 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS12090 PF13419 Haloacid dehalogenase-like hydrolase GQS55_RS12115 PF00400 WD domain, G-beta repeat GQS55_RS12115 PF12894 Anaphase-promoting complex subunit 4 WD40 domain GQS55_RS12130 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS12135 PF00313 'Cold-shock' DNA-binding domain GQS55_RS12140 PF01026 TatD related DNase GQS55_RS12150 PF09115 DNA polymerase III, delta subunit, C terminal GQS55_RS12155 PF02223 Thymidylate kinase GQS55_RS12180 PF07244 Surface antigen variable number repeat GQS55_RS12180 PF01103 Surface antigen GQS55_RS12180 PF17243 POTRA domain TamA domain 1 GQS55_RS12185 PF04357 TamB, inner membrane protein subunit of TAM complex GQS55_RS12190 PF02618 YceG-like family GQS55_RS12195 PF01063 Amino-transferase class IV GQS55_RS12200 PF02801 Beta-ketoacyl synthase, C-terminal domain GQS55_RS12200 PF00109 Beta-ketoacyl synthase, N-terminal domain GQS55_RS12205 PF00550 Phosphopantetheine attachment site GQS55_RS12215 PF00698 Acyl transferase domain GQS55_RS12220 PF02504 Fatty acid synthesis protein GQS55_RS12225 PF01783 Ribosomal L32p protein family GQS55_RS12230 PF02620 Large ribosomal RNA subunit accumulation protein YceD GQS55_RS12235 PF02545 Maf-like protein GQS55_RS12250 PF13419 Haloacid dehalogenase-like hydrolase GQS55_RS12255 PF01479 S4 domain GQS55_RS12255 PF00849 RNA pseudouridylate synthase GQS55_RS12260 PF10150 Ribonuclease E/G family GQS55_RS12260 PF00575 S1 RNA binding domain GQS55_RS12260 PF12111 Polyribonucleotide phosphorylase C terminal GQS55_RS12265 PF00155 Aminotransferase class I and II GQS55_RS12275 PF01810 LysE type translocator GQS55_RS12280 PF03129 Anticodon binding domain GQS55_RS12280 PF04073 Aminoacyl-tRNA editing domain GQS55_RS12280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GQS55_RS12285 PF00155 Aminotransferase class I and II GQS55_RS12295 PF11849 Domain of unknown function (DUF3369) GQS55_RS12305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GQS55_RS12305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GQS55_RS12305 PF00205 Thiamine pyrophosphate enzyme, central domain GQS55_RS12310 PF10369 Small subunit of acetolactate synthase GQS55_RS12320 PF00708 Acylphosphatase GQS55_RS12325 PF04397 LytTr DNA-binding domain GQS55_RS12325 PF00072 Response regulator receiver domain GQS55_RS12330 PF07694 5TMR of 5TMR-LYT GQS55_RS12330 PF06580 Histidine kinase GQS55_RS12335 PF01230 HIT domain GQS55_RS12340 PF00591 Glycosyl transferase family, a/b domain GQS55_RS12340 PF02885 Glycosyl transferase family, helical bundle domain GQS55_RS12340 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GQS55_RS12345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GQS55_RS12350 PF00593 TonB dependent receptor GQS55_RS12365 PF00245 Alkaline phosphatase GQS55_RS12375 PF01053 Cys/Met metabolism PLP-dependent enzyme GQS55_RS12385 PF03104 DNA polymerase family B, exonuclease domain GQS55_RS12385 PF00136 DNA polymerase family B GQS55_RS12390 PF13307 Helicase C-terminal domain GQS55_RS12390 PF06733 DEAD_2 GQS55_RS12410 PF00196 Bacterial regulatory proteins, luxR family GQS55_RS12415 PF00890 FAD binding domain GQS55_RS12420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GQS55_RS12420 PF00205 Thiamine pyrophosphate enzyme, central domain GQS55_RS12420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GQS55_RS12425 PF13181 Tetratricopeptide repeat GQS55_RS12430 PF00593 TonB dependent receptor GQS55_RS12430 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS12435 PF02028 BCCT, betaine/carnitine/choline family transporter GQS55_RS12440 PF01047 MarR family GQS55_RS12450 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS12450 PF00072 Response regulator receiver domain GQS55_RS12455 PF00672 HAMP domain GQS55_RS12455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS12455 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS12470 PF01784 NIF3 (NGG1p interacting factor 3) GQS55_RS12490 PF00593 TonB dependent receptor GQS55_RS12490 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS12495 PF08241 Methyltransferase domain GQS55_RS12500 PF00753 Metallo-beta-lactamase superfamily GQS55_RS12500 PF16123 Hydroxyacylglutathione hydrolase C-terminus GQS55_RS12505 PF01464 Transglycosylase SLT domain GQS55_RS12505 PF01476 LysM domain GQS55_RS12515 PF00115 Cytochrome C and Quinol oxidase polypeptide I GQS55_RS12530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GQS55_RS12530 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GQS55_RS12540 PF00403 Heavy-metal-associated domain GQS55_RS12555 PF13545 Crp-like helix-turn-helix domain GQS55_RS12555 PF00027 Cyclic nucleotide-binding domain GQS55_RS12560 PF00582 Universal stress protein family GQS55_RS12565 PF01171 PP-loop family GQS55_RS12580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GQS55_RS12580 PF12806 Acetyl-CoA dehydrogenase C-terminal like GQS55_RS12580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GQS55_RS12580 PF02770 Acyl-CoA dehydrogenase, middle domain GQS55_RS12590 PF01081 KDPG and KHG aldolase GQS55_RS12595 PF00920 Dehydratase family GQS55_RS12600 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GQS55_RS12605 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GQS55_RS12605 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GQS55_RS12610 PF01418 Helix-turn-helix domain, rpiR family GQS55_RS12610 PF01380 SIS domain GQS55_RS12615 PF00224 Pyruvate kinase, barrel domain GQS55_RS12615 PF02887 Pyruvate kinase, alpha/beta domain GQS55_RS12620 PF00171 Aldehyde dehydrogenase family GQS55_RS12655 PF00664 ABC transporter transmembrane region GQS55_RS12655 PF00005 ABC transporter GQS55_RS12660 PF17151 Periplasmic sensor domain GQS55_RS12660 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS12690 PF01132 Elongation factor P (EF-P) OB domain GQS55_RS12690 PF09285 Elongation factor P, C-terminal GQS55_RS12690 PF08207 Elongation factor P (EF-P) KOW-like domain GQS55_RS12695 PF09285 Elongation factor P, C-terminal GQS55_RS12695 PF08207 Elongation factor P (EF-P) KOW-like domain GQS55_RS12695 PF01132 Elongation factor P (EF-P) OB domain GQS55_RS12700 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) GQS55_RS12715 PF12804 MobA-like NTP transferase domain GQS55_RS12725 PF01804 Penicillin amidase GQS55_RS12735 PF01817 Chorismate mutase type II GQS55_RS12735 PF00800 Prephenate dehydratase GQS55_RS12740 PF00873 AcrB/AcrD/AcrF family GQS55_RS12745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQS55_RS12760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS12760 PF00672 HAMP domain GQS55_RS12760 PF12729 Four helix bundle sensory module for signal transduction GQS55_RS12765 PF01817 Chorismate mutase type II GQS55_RS12765 PF02153 Prephenate dehydrogenase GQS55_RS12770 PF00793 DAHP synthetase I family GQS55_RS12785 PF03167 Uracil DNA glycosylase superfamily GQS55_RS12800 PF01738 Dienelactone hydrolase family GQS55_RS12815 PF00557 Metallopeptidase family M24 GQS55_RS12815 PF01321 Creatinase/Prolidase N-terminal domain GQS55_RS12840 PF00549 CoA-ligase GQS55_RS12840 PF02629 CoA binding domain GQS55_RS12845 PF00549 CoA-ligase GQS55_RS12845 PF08442 ATP-grasp domain GQS55_RS12850 PF00364 Biotin-requiring enzyme GQS55_RS12850 PF02817 e3 binding domain GQS55_RS12850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GQS55_RS12855 PF02779 Transketolase, pyrimidine binding domain GQS55_RS12855 PF16870 2-oxoglutarate dehydrogenase C-terminal GQS55_RS12855 PF16078 2-oxoglutarate dehydrogenase N-terminus GQS55_RS12855 PF00676 Dehydrogenase E1 component GQS55_RS12860 PF13085 2Fe-2S iron-sulfur cluster binding domain GQS55_RS12865 PF02910 Fumarate reductase flavoprotein C-term GQS55_RS12865 PF00890 FAD binding domain GQS55_RS12870 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GQS55_RS12875 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GQS55_RS12880 PF00285 Citrate synthase, C-terminal domain GQS55_RS12885 PF00899 ThiF family GQS55_RS12890 PF08447 PAS fold GQS55_RS12890 PF13426 PAS domain GQS55_RS12890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS12900 PF01259 SAICAR synthetase GQS55_RS12905 PF00453 Ribosomal protein L20 GQS55_RS12910 PF01632 Ribosomal protein L35 GQS55_RS12915 PF00707 Translation initiation factor IF-3, C-terminal domain GQS55_RS12915 PF05198 Translation initiation factor IF-3, N-terminal domain GQS55_RS12920 PF03129 Anticodon binding domain GQS55_RS12920 PF02824 TGS domain GQS55_RS12920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GQS55_RS12920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GQS55_RS12930 PF11953 Domain of unknown function (DUF3470) GQS55_RS12930 PF00037 4Fe-4S binding domain GQS55_RS12940 PF01554 MatE GQS55_RS12955 PF01381 Helix-turn-helix GQS55_RS12960 PF07804 HipA-like C-terminal domain GQS55_RS12960 PF13657 HipA N-terminal domain GQS55_RS12980 PF00271 Helicase conserved C-terminal domain GQS55_RS12980 PF04851 Type III restriction enzyme, res subunit GQS55_RS13005 PF13361 UvrD-like helicase C-terminal domain GQS55_RS13005 PF00580 UvrD/REP helicase N-terminal domain GQS55_RS13005 PF12462 DNA helicase IV / RNA helicase N terminal GQS55_RS13020 PF00005 ABC transporter GQS55_RS13025 PF18075 FtsX extracellular domain GQS55_RS13025 PF02687 FtsX-like permease family GQS55_RS13030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQS55_RS13055 PF00672 HAMP domain GQS55_RS13055 PF12729 Four helix bundle sensory module for signal transduction GQS55_RS13055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS13060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GQS55_RS13065 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GQS55_RS13070 PF03480 Bacterial extracellular solute-binding protein, family 7 GQS55_RS13075 PF09092 Lyase, N terminal GQS55_RS13075 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain GQS55_RS13075 PF09093 Lyase, catalytic GQS55_RS13075 PF02278 Polysaccharide lyase family 8, super-sandwich domain GQS55_RS13100 PF04962 KduI/IolB family GQS55_RS13105 PF07729 FCD domain GQS55_RS13105 PF00392 Bacterial regulatory proteins, gntR family GQS55_RS13115 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS13115 PF00593 TonB dependent receptor GQS55_RS13125 PF00989 PAS fold GQS55_RS13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS13125 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS13130 PF00072 Response regulator receiver domain GQS55_RS13130 PF00158 Sigma-54 interaction domain GQS55_RS13130 PF02954 Bacterial regulatory protein, Fis family GQS55_RS13135 PF12704 MacB-like periplasmic core domain GQS55_RS13135 PF00005 ABC transporter GQS55_RS13135 PF02687 FtsX-like permease family GQS55_RS13145 PF02687 FtsX-like permease family GQS55_RS13145 PF00005 ABC transporter GQS55_RS13145 PF12704 MacB-like periplasmic core domain GQS55_RS13165 PF05971 RNA methyltransferase GQS55_RS13175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GQS55_RS13175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GQS55_RS13175 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS13180 PF00108 Thiolase, N-terminal domain GQS55_RS13180 PF02803 Thiolase, C-terminal domain GQS55_RS13185 PF17863 AAA lid domain GQS55_RS13185 PF07726 ATPase family associated with various cellular activities (AAA) GQS55_RS13190 PF01882 Protein of unknown function DUF58 GQS55_RS13200 PF00092 von Willebrand factor type A domain GQS55_RS13205 PF13519 von Willebrand factor type A domain GQS55_RS13205 PF07584 Aerotolerance regulator N-terminal GQS55_RS13215 PF04542 Sigma-70 region 2 GQS55_RS13215 PF08281 Sigma-70, region 4 GQS55_RS13225 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GQS55_RS13230 PF00474 Sodium:solute symporter family GQS55_RS13235 PF08668 HDOD domain GQS55_RS13235 PF00563 EAL domain GQS55_RS13240 PF16363 GDP-mannose 4,6 dehydratase GQS55_RS13255 PF02080 TrkA-C domain GQS55_RS13255 PF03600 Citrate transporter GQS55_RS13260 PF00009 Elongation factor Tu GTP binding domain GQS55_RS13265 PF01507 Phosphoadenosine phosphosulfate reductase family GQS55_RS13275 PF00270 DEAD/DEAH box helicase GQS55_RS13275 PF00271 Helicase conserved C-terminal domain GQS55_RS13275 PF03461 TRCF domain GQS55_RS13275 PF17757 UvrB interaction domain GQS55_RS13275 PF02559 CarD-like/TRCF domain GQS55_RS13305 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS13305 PF00563 EAL domain GQS55_RS13305 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS13315 PF07940 Heparinase II/III-like protein GQS55_RS13315 PF05426 Alginate lyase GQS55_RS13320 PF00849 RNA pseudouridylate synthase GQS55_RS13320 PF01479 S4 domain GQS55_RS13325 PF08007 Cupin superfamily protein GQS55_RS13330 PF01339 CheB methylesterase GQS55_RS13330 PF00072 Response regulator receiver domain GQS55_RS13335 PF00005 ABC transporter GQS55_RS13345 PF00528 Binding-protein-dependent transport system inner membrane component GQS55_RS13350 PF00005 ABC transporter GQS55_RS13360 PF04324 BFD-like [2Fe-2S] binding domain GQS55_RS13360 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GQS55_RS13360 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GQS55_RS13360 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS13360 PF13806 Rieske-like [2Fe-2S] domain GQS55_RS13360 PF18267 Rubredoxin NAD+ reductase C-terminal domain GQS55_RS13370 PF01568 Molydopterin dinucleotide binding domain GQS55_RS13370 PF04324 BFD-like [2Fe-2S] binding domain GQS55_RS13370 PF00384 Molybdopterin oxidoreductase GQS55_RS13370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GQS55_RS13375 PF03966 Trm112p-like protein GQS55_RS13380 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GQS55_RS13385 PF00005 ABC transporter GQS55_RS13385 PF00664 ABC transporter transmembrane region GQS55_RS13390 PF13567 Domain of unknown function (DUF4131) GQS55_RS13390 PF00753 Metallo-beta-lactamase superfamily GQS55_RS13390 PF03772 Competence protein GQS55_RS13400 PF17864 RuvB AAA lid domain GQS55_RS13400 PF05491 RuvB C-terminal winged helix domain GQS55_RS13400 PF05496 Holliday junction DNA helicase RuvB P-loop domain GQS55_RS13405 PF07499 RuvA, C-terminal domain GQS55_RS13405 PF01330 RuvA N terminal domain GQS55_RS13410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GQS55_RS13410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GQS55_RS13415 PF02075 Crossover junction endodeoxyribonuclease RuvC GQS55_RS13420 PF00152 tRNA synthetases class II (D, K and N) GQS55_RS13420 PF02938 GAD domain GQS55_RS13420 PF01336 OB-fold nucleic acid binding domain GQS55_RS13425 PF13649 Methyltransferase domain GQS55_RS13430 PF08003 Protein of unknown function (DUF1698) GQS55_RS13455 PF01966 HD domain GQS55_RS13455 PF13286 Phosphohydrolase-associated domain GQS55_RS13480 PF07660 Secretin and TonB N terminus short domain GQS55_RS13480 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS13480 PF00593 TonB dependent receptor GQS55_RS13490 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS13500 PF01679 Proteolipid membrane potential modulator GQS55_RS13505 PF00230 Major intrinsic protein GQS55_RS13515 PF02817 e3 binding domain GQS55_RS13515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GQS55_RS13515 PF00364 Biotin-requiring enzyme GQS55_RS13520 PF02779 Transketolase, pyrimidine binding domain GQS55_RS13520 PF02780 Transketolase, C-terminal domain GQS55_RS13525 PF00676 Dehydrogenase E1 component GQS55_RS13530 PF00248 Aldo/keto reductase family GQS55_RS13535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GQS55_RS13545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GQS55_RS13545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GQS55_RS13545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GQS55_RS13545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GQS55_RS13550 PF03925 SeqA protein C-terminal domain GQS55_RS13550 PF17206 SeqA protein N-terminal domain GQS55_RS13555 PF00561 alpha/beta hydrolase fold GQS55_RS13565 PF01402 Ribbon-helix-helix protein, copG family GQS55_RS13570 PF00258 Flavodoxin GQS55_RS13575 PF01475 Ferric uptake regulator family GQS55_RS13590 PF08274 PhnA Zinc-Ribbon GQS55_RS13590 PF03831 PhnA domain GQS55_RS13595 PF00375 Sodium:dicarboxylate symporter family GQS55_RS13600 PF09179 TilS substrate binding domain GQS55_RS13600 PF01171 PP-loop family GQS55_RS13600 PF11734 TilS substrate C-terminal domain GQS55_RS13605 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GQS55_RS13610 PF14579 Helix-hairpin-helix motif GQS55_RS13610 PF07733 Bacterial DNA polymerase III alpha NTPase domain GQS55_RS13610 PF01336 OB-fold nucleic acid binding domain GQS55_RS13610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GQS55_RS13610 PF02811 PHP domain GQS55_RS13615 PF01351 Ribonuclease HII GQS55_RS13620 PF02684 Lipid-A-disaccharide synthetase GQS55_RS13625 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GQS55_RS13625 PF00132 Bacterial transferase hexapeptide (six repeats) GQS55_RS13630 PF07977 FabA-like domain GQS55_RS13635 PF00132 Bacterial transferase hexapeptide (six repeats) GQS55_RS13635 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GQS55_RS13645 PF07244 Surface antigen variable number repeat GQS55_RS13645 PF01103 Surface antigen GQS55_RS13650 PF17820 PDZ domain GQS55_RS13650 PF02163 Peptidase family M50 GQS55_RS13655 PF13288 DXP reductoisomerase C-terminal domain GQS55_RS13655 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GQS55_RS13655 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GQS55_RS13665 PF01255 Putative undecaprenyl diphosphate synthase GQS55_RS13670 PF01765 Ribosome recycling factor GQS55_RS13675 PF00696 Amino acid kinase family GQS55_RS13680 PF00889 Elongation factor TS GQS55_RS13685 PF00318 Ribosomal protein S2 GQS55_RS13695 PF00557 Metallopeptidase family M24 GQS55_RS13700 PF01966 HD domain GQS55_RS13700 PF01842 ACT domain GQS55_RS13700 PF01909 Nucleotidyltransferase domain GQS55_RS13700 PF08335 GlnD PII-uridylyltransferase GQS55_RS13705 PF14602 Hexapeptide repeat of succinyl-transferase GQS55_RS13705 PF00132 Bacterial transferase hexapeptide (six repeats) GQS55_RS13705 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GQS55_RS13715 PF00425 chorismate binding enzyme GQS55_RS13715 PF04715 Anthranilate synthase component I, N terminal region GQS55_RS13720 PF00293 NUDIX domain GQS55_RS13725 PF03313 Serine dehydratase alpha chain GQS55_RS13725 PF03315 Serine dehydratase beta chain GQS55_RS13730 PF03466 LysR substrate binding domain GQS55_RS13730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS13745 PF01131 DNA topoisomerase GQS55_RS13745 PF01751 Toprim domain GQS55_RS13745 PF01396 Topoisomerase DNA binding C4 zinc finger GQS55_RS13745 PF08272 Topoisomerase I zinc-ribbon-like GQS55_RS13750 PF00491 Arginase family GQS55_RS13760 PF00375 Sodium:dicarboxylate symporter family GQS55_RS13765 PF01343 Peptidase family S49 GQS55_RS13765 PF08496 Peptidase family S49 N-terminal GQS55_RS13770 PF01804 Penicillin amidase GQS55_RS13780 PF00106 short chain dehydrogenase GQS55_RS13785 PF00501 AMP-binding enzyme GQS55_RS13785 PF13193 AMP-binding enzyme C-terminal domain GQS55_RS13790 PF12697 Alpha/beta hydrolase family GQS55_RS13805 PF00814 Glycoprotease family GQS55_RS13810 PF06733 DEAD_2 GQS55_RS13810 PF13307 Helicase C-terminal domain GQS55_RS13825 PF08029 HisG, C-terminal domain GQS55_RS13825 PF01634 ATP phosphoribosyltransferase GQS55_RS13835 PF00155 Aminotransferase class I and II GQS55_RS13840 PF00475 Imidazoleglycerol-phosphate dehydratase GQS55_RS13840 PF08645 Polynucleotide kinase 3 phosphatase GQS55_RS13845 PF00117 Glutamine amidotransferase class-I GQS55_RS13850 PF00977 Histidine biosynthesis protein GQS55_RS13855 PF00977 Histidine biosynthesis protein GQS55_RS13860 PF01502 Phosphoribosyl-AMP cyclohydrolase GQS55_RS13860 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GQS55_RS13865 PF02348 Cytidylyltransferase GQS55_RS13870 PF01380 SIS domain GQS55_RS13870 PF00571 CBS domain GQS55_RS13875 PF05159 Capsule polysaccharide biosynthesis protein GQS55_RS13880 PF13673 Acetyltransferase (GNAT) domain GQS55_RS13885 PF01124 MAPEG family GQS55_RS13890 PF05191 Adenylate kinase, active site lid GQS55_RS13895 PF00183 Hsp90 protein GQS55_RS13895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS13900 PF02132 RecR protein GQS55_RS13900 PF13662 Toprim domain GQS55_RS13910 PF04315 Elongation factor P hydroxylase GQS55_RS13920 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GQS55_RS13930 PF00361 Proton-conducting membrane transporter GQS55_RS13935 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GQS55_RS13940 PF13244 Domain of unknown function (DUF4040) GQS55_RS13940 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GQS55_RS13940 PF00361 Proton-conducting membrane transporter GQS55_RS13940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GQS55_RS13945 PF01037 Lrp/AsnC ligand binding domain GQS55_RS13950 PF11737 Protein of unknown function (DUF3300) GQS55_RS13955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS13955 PF08918 PhoQ Sensor GQS55_RS13960 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS13960 PF00072 Response regulator receiver domain GQS55_RS13975 PF00684 DnaJ central domain GQS55_RS13975 PF01556 DnaJ C terminal domain GQS55_RS13975 PF00226 DnaJ domain GQS55_RS13980 PF00012 Hsp70 protein GQS55_RS13985 PF01025 GrpE GQS55_RS13990 PF01513 ATP-NAD kinase GQS55_RS13995 PF02463 RecF/RecN/SMC N terminal domain GQS55_RS14000 PF04355 SmpA / OmlA family GQS55_RS14005 PF07977 FabA-like domain GQS55_RS14015 PF00196 Bacterial regulatory proteins, luxR family GQS55_RS14015 PF00072 Response regulator receiver domain GQS55_RS14020 PF01541 GIY-YIG catalytic domain GQS55_RS14020 PF02151 UvrB/uvrC motif GQS55_RS14020 PF08459 UvrC Helix-hairpin-helix N-terminal GQS55_RS14025 PF01066 CDP-alcohol phosphatidyltransferase GQS55_RS14060 PF01322 Cytochrome C' GQS55_RS14095 PF02445 Quinolinate synthetase A protein GQS55_RS14125 PF13525 Outer membrane lipoprotein GQS55_RS14125 PF16331 TolA binding protein trimerisation GQS55_RS14130 PF00691 OmpA family GQS55_RS14135 PF07676 WD40-like Beta Propeller Repeat GQS55_RS14135 PF04052 TolB amino-terminal domain GQS55_RS14145 PF02472 Biopolymer transport protein ExbD/TolR GQS55_RS14150 PF01618 MotA/TolQ/ExbB proton channel family GQS55_RS14155 PF03061 Thioesterase superfamily GQS55_RS14160 PF02687 FtsX-like permease family GQS55_RS14160 PF12704 MacB-like periplasmic core domain GQS55_RS14165 PF00005 ABC transporter GQS55_RS14170 PF02687 FtsX-like permease family GQS55_RS14170 PF12704 MacB-like periplasmic core domain GQS55_RS14190 PF03449 Transcription elongation factor, N-terminal GQS55_RS14190 PF01272 Transcription elongation factor, GreA/GreB, C-term GQS55_RS14195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GQS55_RS14195 PF02142 MGS-like domain GQS55_RS14195 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GQS55_RS14200 PF00117 Glutamine amidotransferase class-I GQS55_RS14200 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GQS55_RS14205 PF01113 Dihydrodipicolinate reductase, N-terminus GQS55_RS14205 PF05173 Dihydrodipicolinate reductase, C-terminus GQS55_RS14215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GQS55_RS14215 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GQS55_RS14230 PF01653 NAD-dependent DNA ligase adenylation domain GQS55_RS14230 PF00533 BRCA1 C Terminus (BRCT) domain GQS55_RS14230 PF03120 NAD-dependent DNA ligase OB-fold domain GQS55_RS14230 PF12826 Helix-hairpin-helix motif GQS55_RS14230 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GQS55_RS14235 PF04354 ZipA, C-terminal FtsZ-binding domain GQS55_RS14255 PF02779 Transketolase, pyrimidine binding domain GQS55_RS14255 PF02780 Transketolase, C-terminal domain GQS55_RS14255 PF00456 Transketolase, thiamine diphosphate binding domain GQS55_RS14260 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GQS55_RS14260 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GQS55_RS14265 PF00342 Phosphoglucose isomerase GQS55_RS14270 PF00356 Bacterial regulatory proteins, lacI family GQS55_RS14285 PF04012 PspA/IM30 family GQS55_RS14290 PF02954 Bacterial regulatory protein, Fis family GQS55_RS14290 PF00158 Sigma-54 interaction domain GQS55_RS14295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GQS55_RS14300 PF00528 Binding-protein-dependent transport system inner membrane component GQS55_RS14305 PF12911 N-terminal TM domain of oligopeptide transport permease C GQS55_RS14305 PF00528 Binding-protein-dependent transport system inner membrane component GQS55_RS14310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GQS55_RS14310 PF00005 ABC transporter GQS55_RS14315 PF00005 ABC transporter GQS55_RS14320 PF13145 PPIC-type PPIASE domain GQS55_RS14325 PF00216 Bacterial DNA-binding protein GQS55_RS14335 PF06689 ClpX C4-type zinc finger GQS55_RS14335 PF07724 AAA domain (Cdc48 subfamily) GQS55_RS14335 PF10431 C-terminal, D2-small domain, of ClpB protein GQS55_RS14340 PF00574 Clp protease GQS55_RS14345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GQS55_RS14345 PF05698 Bacterial trigger factor protein (TF) C-terminus GQS55_RS14345 PF05697 Bacterial trigger factor protein (TF) GQS55_RS14370 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GQS55_RS14370 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GQS55_RS14375 PF01406 tRNA synthetases class I (C) catalytic domain GQS55_RS14375 PF09190 DALR domain GQS55_RS14380 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GQS55_RS14385 PF12850 Calcineurin-like phosphoesterase superfamily domain GQS55_RS14395 PF03150 Di-haem cytochrome c peroxidase GQS55_RS14395 PF00034 Cytochrome c GQS55_RS14410 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GQS55_RS14425 PF00156 Phosphoribosyl transferase domain GQS55_RS14430 PF02674 Colicin V production protein GQS55_RS14440 PF02875 Mur ligase family, glutamate ligase domain GQS55_RS14440 PF08245 Mur ligase middle domain GQS55_RS14445 PF17848 Acetyl-coA carboxylase zinc finger domain GQS55_RS14445 PF01039 Carboxyl transferase domain GQS55_RS14450 PF01416 tRNA pseudouridine synthase GQS55_RS14460 PF01118 Semialdehyde dehydrogenase, NAD binding domain GQS55_RS14460 PF02774 Semialdehyde dehydrogenase, dimerisation domain GQS55_RS14465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GQS55_RS14465 PF11890 Domain of unknown function (DUF3410) GQS55_RS14465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GQS55_RS14470 PF00109 Beta-ketoacyl synthase, N-terminal domain GQS55_RS14470 PF02801 Beta-ketoacyl synthase, C-terminal domain GQS55_RS14475 PF01266 FAD dependent oxidoreductase GQS55_RS14475 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GQS55_RS14500 PF00158 Sigma-54 interaction domain GQS55_RS14500 PF00072 Response regulator receiver domain GQS55_RS14510 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS14540 PF01544 CorA-like Mg2+ transporter protein GQS55_RS14555 PF00962 Adenosine/AMP deaminase GQS55_RS14570 PF08013 Tagatose 6 phosphate kinase GQS55_RS14575 PF01380 SIS domain GQS55_RS14590 PF00578 AhpC/TSA family GQS55_RS14595 PF16875 Glycosyl hydrolase family 36 N-terminal domain GQS55_RS14595 PF16874 Glycosyl hydrolase family 36 C-terminal domain GQS55_RS14615 PF00342 Phosphoglucose isomerase GQS55_RS14625 PF16499 Alpha galactosidase A GQS55_RS14625 PF17801 Alpha galactosidase C-terminal beta sandwich domain GQS55_RS14630 PF00455 DeoR C terminal sensor domain GQS55_RS14630 PF08220 DeoR-like helix-turn-helix domain GQS55_RS14650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS14650 PF03466 LysR substrate binding domain GQS55_RS14655 PF08443 RimK-like ATP-grasp domain GQS55_RS14655 PF18030 RimK PreATP-grasp domain GQS55_RS14665 PF08443 RimK-like ATP-grasp domain GQS55_RS14665 PF18030 RimK PreATP-grasp domain GQS55_RS14670 PF12794 Mechanosensitive ion channel inner membrane domain 1 GQS55_RS14670 PF00924 Mechanosensitive ion channel GQS55_RS14670 PF12795 Mechanosensitive ion channel porin domain GQS55_RS14680 PF00448 SRP54-type protein, GTPase domain GQS55_RS14680 PF02881 SRP54-type protein, helical bundle domain GQS55_RS14680 PF02978 Signal peptide binding domain GQS55_RS14685 PF03773 Predicted permease GQS55_RS14695 PF01595 Cyclin M transmembrane N-terminal domain GQS55_RS14695 PF03471 Transporter associated domain GQS55_RS14695 PF00571 CBS domain GQS55_RS14740 PF03466 LysR substrate binding domain GQS55_RS14740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS14745 PF01223 DNA/RNA non-specific endonuclease GQS55_RS14750 PF00893 Small Multidrug Resistance protein GQS55_RS14755 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS14755 PF00593 TonB dependent receptor GQS55_RS14760 PF02112 cAMP phosphodiesterases class-II GQS55_RS14765 PF04262 Glutamate-cysteine ligase GQS55_RS14770 PF05193 Peptidase M16 inactive domain GQS55_RS14770 PF00675 Insulinase (Peptidase family M16) GQS55_RS14775 PF00849 RNA pseudouridylate synthase GQS55_RS14780 PF00209 Sodium:neurotransmitter symporter family GQS55_RS14785 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS14790 PF01336 OB-fold nucleic acid binding domain GQS55_RS14790 PF00152 tRNA synthetases class II (D, K and N) GQS55_RS14800 PF02272 DHHA1 domain GQS55_RS14800 PF01368 DHH family GQS55_RS14800 PF17768 RecJ OB domain GQS55_RS14805 PF10411 Disulfide bond isomerase protein N-terminus GQS55_RS14805 PF13098 Thioredoxin-like domain GQS55_RS14810 PF00258 Flavodoxin GQS55_RS14815 PF00270 DEAD/DEAH box helicase GQS55_RS14815 PF00271 Helicase conserved C-terminal domain GQS55_RS14830 PF00593 TonB dependent receptor GQS55_RS14830 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS14835 PF00270 DEAD/DEAH box helicase GQS55_RS14835 PF00271 Helicase conserved C-terminal domain GQS55_RS14845 PF13358 DDE superfamily endonuclease GQS55_RS14885 PF03883 Peroxide stress protein YaaA GQS55_RS14890 PF00923 Transaldolase/Fructose-6-phosphate aldolase GQS55_RS14910 PF00849 RNA pseudouridylate synthase GQS55_RS14935 PF07308 Protein of unknown function (DUF1456) GQS55_RS14945 PF03544 Gram-negative bacterial TonB protein C-terminal GQS55_RS14950 PF02472 Biopolymer transport protein ExbD/TolR GQS55_RS14955 PF01618 MotA/TolQ/ExbB proton channel family GQS55_RS14960 PF01618 MotA/TolQ/ExbB proton channel family GQS55_RS14975 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GQS55_RS14985 PF00588 SpoU rRNA Methylase family GQS55_RS14985 PF08032 RNA 2'-O ribose methyltransferase substrate binding GQS55_RS14990 PF03690 Uncharacterised protein family (UPF0160) GQS55_RS15000 PF00753 Metallo-beta-lactamase superfamily GQS55_RS15005 PF00209 Sodium:neurotransmitter symporter family GQS55_RS15015 PF04359 Protein of unknown function (DUF493) GQS55_RS15020 PF03099 Biotin/lipoate A/B protein ligase family GQS55_RS15025 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GQS55_RS15025 PF04055 Radical SAM superfamily GQS55_RS15030 PF00999 Sodium/hydrogen exchanger family GQS55_RS15050 PF00860 Permease family GQS55_RS15055 PF00962 Adenosine/AMP deaminase GQS55_RS15075 PF01048 Phosphorylase superfamily GQS55_RS15080 PF00860 Permease family GQS55_RS15085 PF00440 Bacterial regulatory proteins, tetR family GQS55_RS15085 PF08362 YcdC-like protein, C-terminal region GQS55_RS15095 PF01979 Amidohydrolase family GQS55_RS15100 PF04115 Ureidoglycolate lyase GQS55_RS15105 PF00576 HIUase/Transthyretin family GQS55_RS15115 PF03561 Allantoicase repeat GQS55_RS15120 PF01979 Amidohydrolase family GQS55_RS15130 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GQS55_RS15130 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GQS55_RS15135 PF01799 [2Fe-2S] binding domain GQS55_RS15135 PF00111 2Fe-2S iron-sulfur cluster binding domain GQS55_RS15145 PF05362 Lon protease (S16) C-terminal proteolytic domain GQS55_RS15145 PF13654 AAA domain GQS55_RS15150 PF07295 Zinc-ribbon containing domain GQS55_RS15155 PF13603 Leucyl-tRNA synthetase, Domain 2 GQS55_RS15155 PF00133 tRNA synthetases class I (I, L, M and V) GQS55_RS15155 PF08264 Anticodon-binding domain of tRNA GQS55_RS15160 PF04390 Lipopolysaccharide-assembly GQS55_RS15165 PF14840 Processivity clamp loader gamma complex DNA pol III C-term GQS55_RS15165 PF06144 DNA polymerase III, delta subunit GQS55_RS15170 PF01467 Cytidylyltransferase-like GQS55_RS15180 PF02590 Predicted SPOUT methyltransferase GQS55_RS15185 PF00905 Penicillin binding protein transpeptidase domain GQS55_RS15185 PF03717 Penicillin-binding Protein dimerisation domain GQS55_RS15190 PF01098 Cell cycle protein GQS55_RS15195 PF03330 Lytic transglycolase GQS55_RS15195 PF05036 Sporulation related domain GQS55_RS15200 PF00768 D-alanyl-D-alanine carboxypeptidase GQS55_RS15200 PF07943 Penicillin-binding protein 5, C-terminal domain GQS55_RS15205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GQS55_RS15205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GQS55_RS15210 PF06877 Regulator of ribonuclease activity B GQS55_RS15215 PF01553 Acyltransferase GQS55_RS15225 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS15230 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GQS55_RS15235 PF00303 Thymidylate synthase GQS55_RS15240 PF01790 Prolipoprotein diacylglyceryl transferase GQS55_RS15245 PF01925 Sulfite exporter TauE/SafE GQS55_RS15250 PF01590 GAF domain GQS55_RS15250 PF05524 PEP-utilising enzyme, N-terminal GQS55_RS15250 PF00391 PEP-utilising enzyme, mobile domain GQS55_RS15250 PF02896 PEP-utilising enzyme, TIM barrel domain GQS55_RS15255 PF00293 NUDIX domain GQS55_RS15260 PF02976 DNA mismatch repair enzyme MutH GQS55_RS15265 PF01263 Aldose 1-epimerase GQS55_RS15270 PF01734 Patatin-like phospholipase GQS55_RS15285 PF12838 4Fe-4S dicluster domain GQS55_RS15315 PF00005 ABC transporter GQS55_RS15315 PF12848 ABC transporter GQS55_RS15330 PF06167 Glucose-regulated metallo-peptidase M90 GQS55_RS15340 PF00294 pfkB family carbohydrate kinase GQS55_RS15345 PF07690 Major Facilitator Superfamily GQS55_RS15355 PF14592 Chondroitinase B GQS55_RS15365 PF00392 Bacterial regulatory proteins, gntR family GQS55_RS15365 PF07729 FCD domain GQS55_RS15375 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GQS55_RS15375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GQS55_RS15390 PF02492 CobW/HypB/UreG, nucleotide-binding domain GQS55_RS15395 PF01730 UreF GQS55_RS15400 PF02814 UreE urease accessory protein, N-terminal domain GQS55_RS15400 PF05194 UreE urease accessory protein, C-terminal domain GQS55_RS15405 PF01979 Amidohydrolase family GQS55_RS15405 PF00449 Urease alpha-subunit, N-terminal domain GQS55_RS15410 PF00699 Urease beta subunit GQS55_RS15415 PF00547 Urease, gamma subunit GQS55_RS15420 PF01774 UreD urease accessory protein GQS55_RS15425 PF00005 ABC transporter GQS55_RS15430 PF12399 Branched-chain amino acid ATP-binding cassette transporter GQS55_RS15430 PF00005 ABC transporter GQS55_RS15440 PF02653 Branched-chain amino acid transport system / permease component GQS55_RS15455 PF18415 Histidine kinase receptor ArcB trans-membrane domain GQS55_RS15455 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS15455 PF00989 PAS fold GQS55_RS15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS15455 PF00072 Response regulator receiver domain GQS55_RS15455 PF01627 Hpt domain GQS55_RS15460 PF00072 Response regulator receiver domain GQS55_RS15460 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS15485 PF02575 YbaB/EbfC DNA-binding family GQS55_RS15490 PF12170 DNA polymerase III tau subunit V interacting with alpha GQS55_RS15490 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GQS55_RS15490 PF12169 DNA polymerase III subunits gamma and tau domain III GQS55_RS15495 PF00156 Phosphoribosyl transferase domain GQS55_RS15500 PF00072 Response regulator receiver domain GQS55_RS15500 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS15505 PF00342 Phosphoglucose isomerase GQS55_RS15510 PF00483 Nucleotidyl transferase GQS55_RS15515 PF11356 Type II secretion system protein C GQS55_RS15520 PF00263 Bacterial type II and III secretion system protein GQS55_RS15520 PF03958 Bacterial type II/III secretion system short domain GQS55_RS15530 PF00437 Type II/IV secretion system protein GQS55_RS15535 PF00482 Type II secretion system (T2SS), protein F GQS55_RS15540 PF07963 Prokaryotic N-terminal methylation motif GQS55_RS15540 PF08334 Type II secretion system (T2SS), protein G GQS55_RS15545 PF07963 Prokaryotic N-terminal methylation motif GQS55_RS15545 PF12019 Type II transport protein GspH GQS55_RS15550 PF02501 Type II secretion system (T2SS), protein I GQS55_RS15550 PF07963 Prokaryotic N-terminal methylation motif GQS55_RS15555 PF07963 Prokaryotic N-terminal methylation motif GQS55_RS15555 PF11612 Type II secretion system (T2SS), protein J GQS55_RS15560 PF03934 Type II secretion system (T2SS), protein K GQS55_RS15565 PF12693 GspL periplasmic domain GQS55_RS15565 PF05134 Type II secretion system (T2SS), protein L GQS55_RS15570 PF04612 Type II secretion system (T2SS), protein M GQS55_RS15575 PF01203 Type II secretion system (T2SS), protein N GQS55_RS15580 PF03150 Di-haem cytochrome c peroxidase GQS55_RS15600 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GQS55_RS15600 PF00753 Metallo-beta-lactamase superfamily GQS55_RS15600 PF10996 Beta-Casp domain GQS55_RS15605 PF03710 Glutamate-ammonia ligase adenylyltransferase GQS55_RS15605 PF08335 GlnD PII-uridylyltransferase GQS55_RS15625 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) GQS55_RS15645 PF01928 CYTH domain GQS55_RS15650 PF08239 Bacterial SH3 domain GQS55_RS15665 PF00682 HMGL-like GQS55_RS15665 PF07836 DmpG-like communication domain GQS55_RS15675 PF02348 Cytidylyltransferase GQS55_RS15680 PF00682 HMGL-like GQS55_RS15680 PF08502 LeuA allosteric (dimerisation) domain GQS55_RS15685 PF00180 Isocitrate/isopropylmalate dehydrogenase GQS55_RS15690 PF00330 Aconitase family (aconitate hydratase) GQS55_RS15695 PF00694 Aconitase C-terminal domain GQS55_RS15700 PF13401 AAA domain GQS55_RS15700 PF01471 Putative peptidoglycan binding domain GQS55_RS15705 PF12627 Probable RNA and SrmB- binding site of polymerase A GQS55_RS15705 PF01743 Poly A polymerase head domain GQS55_RS15705 PF01966 HD domain GQS55_RS15710 PF12843 Putative quorum-sensing-regulated virulence factor GQS55_RS15725 PF00072 Response regulator receiver domain GQS55_RS15740 PF01625 Peptide methionine sulfoxide reductase GQS55_RS15745 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GQS55_RS15745 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GQS55_RS15755 PF01510 N-acetylmuramoyl-L-alanine amidase GQS55_RS15760 PF17113 Regulatory signalling modulator protein AmpE GQS55_RS15765 PF07729 FCD domain GQS55_RS15765 PF00392 Bacterial regulatory proteins, gntR family GQS55_RS15770 PF17831 Pyruvate dehydrogenase E1 component middle domain GQS55_RS15770 PF00456 Transketolase, thiamine diphosphate binding domain GQS55_RS15775 PF00364 Biotin-requiring enzyme GQS55_RS15775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GQS55_RS15775 PF02817 e3 binding domain GQS55_RS15780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GQS55_RS15780 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS15790 PF01433 Peptidase family M1 domain GQS55_RS15790 PF11838 ERAP1-like C-terminal domain GQS55_RS15800 PF11791 Aconitate B N-terminal domain GQS55_RS15800 PF06434 Aconitate hydratase 2 N-terminus GQS55_RS15800 PF00330 Aconitase family (aconitate hydratase) GQS55_RS15810 PF07885 Ion channel GQS55_RS15830 PF10431 C-terminal, D2-small domain, of ClpB protein GQS55_RS15830 PF17871 AAA lid domain GQS55_RS15830 PF07724 AAA domain (Cdc48 subfamily) GQS55_RS15830 PF00004 ATPase family associated with various cellular activities (AAA) GQS55_RS15830 PF02861 Clp amino terminal domain, pathogenicity island component GQS55_RS15840 PF01479 S4 domain GQS55_RS15840 PF00849 RNA pseudouridylate synthase GQS55_RS15845 PF13525 Outer membrane lipoprotein GQS55_RS15850 PF00543 Nitrogen regulatory protein P-II GQS55_RS15855 PF02540 NAD synthase GQS55_RS15865 PF07963 Prokaryotic N-terminal methylation motif GQS55_RS15865 PF00114 Pilin (bacterial filament) GQS55_RS15875 PF14245 Type IV pilin PilA GQS55_RS15875 PF07963 Prokaryotic N-terminal methylation motif GQS55_RS15900 PF02401 LytB protein GQS55_RS15905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GQS55_RS15910 PF01252 Signal peptidase (SPase) II GQS55_RS15915 PF08264 Anticodon-binding domain of tRNA GQS55_RS15915 PF00133 tRNA synthetases class I (I, L, M and V) GQS55_RS15915 PF06827 Zinc finger found in FPG and IleRS GQS55_RS15920 PF06574 FAD synthetase GQS55_RS15920 PF01687 Riboflavin kinase GQS55_RS15925 PF03023 Lipid II flippase MurJ GQS55_RS15930 PF01649 Ribosomal protein S20 GQS55_RS15940 PF00326 Prolyl oligopeptidase family GQS55_RS15945 PF00579 tRNA synthetases class I (W and Y) GQS55_RS15950 PF04225 Opacity-associated protein A LysM-like domain GQS55_RS15950 PF01551 Peptidase family M23 GQS55_RS15955 PF03702 Anhydro-N-acetylmuramic acid kinase GQS55_RS15965 PF00933 Glycosyl hydrolase family 3 N terminal domain GQS55_RS15975 PF07690 Major Facilitator Superfamily GQS55_RS15980 PF00392 Bacterial regulatory proteins, gntR family GQS55_RS15980 PF00155 Aminotransferase class I and II GQS55_RS15985 PF00892 EamA-like transporter family GQS55_RS15995 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GQS55_RS16000 PF00563 EAL domain GQS55_RS16000 PF08668 HDOD domain GQS55_RS16005 PF01368 DHH family GQS55_RS16005 PF02833 DHHA2 domain GQS55_RS16010 PF02803 Thiolase, C-terminal domain GQS55_RS16010 PF00108 Thiolase, N-terminal domain GQS55_RS16015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GQS55_RS16015 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS16015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GQS55_RS16025 PF00563 EAL domain GQS55_RS16025 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS16025 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS16035 PF01507 Phosphoadenosine phosphosulfate reductase family GQS55_RS16040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GQS55_RS16040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GQS55_RS16045 PF00667 FAD binding domain GQS55_RS16045 PF00175 Oxidoreductase NAD-binding domain GQS55_RS16045 PF00258 Flavodoxin GQS55_RS16070 PF00378 Enoyl-CoA hydratase/isomerase GQS55_RS16090 PF04012 PspA/IM30 family GQS55_RS16100 PF01207 Dihydrouridine synthase (Dus) GQS55_RS16120 PF05707 Zonular occludens toxin (Zot) GQS55_RS16175 PF00892 EamA-like transporter family GQS55_RS16180 PF03466 LysR substrate binding domain GQS55_RS16180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS16210 PF00873 AcrB/AcrD/AcrF family GQS55_RS16215 PF00529 HlyD membrane-fusion protein of T1SS GQS55_RS16215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQS55_RS16225 PF13509 S1 domain GQS55_RS16225 PF17783 CvfB-like winged helix domain GQS55_RS16230 PF08448 PAS fold GQS55_RS16230 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS16245 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GQS55_RS16245 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GQS55_RS16250 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GQS55_RS16250 PF14602 Hexapeptide repeat of succinyl-transferase GQS55_RS16250 PF00132 Bacterial transferase hexapeptide (six repeats) GQS55_RS16255 PF00701 Dihydrodipicolinate synthetase family GQS55_RS16260 PF08468 Methyltransferase small domain N-terminal GQS55_RS16260 PF05175 Methyltransferase small domain GQS55_RS16265 PF00497 Bacterial extracellular solute-binding proteins, family 3 GQS55_RS16265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS16265 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS16270 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS16270 PF00072 Response regulator receiver domain GQS55_RS16275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS16275 PF00072 Response regulator receiver domain GQS55_RS16275 PF01627 Hpt domain GQS55_RS16275 PF00989 PAS fold GQS55_RS16275 PF18415 Histidine kinase receptor ArcB trans-membrane domain GQS55_RS16275 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS16280 PF02649 Type I GTP cyclohydrolase folE2 GQS55_RS16290 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS16290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GQS55_RS16295 PF01493 GXGXG motif GQS55_RS16295 PF01645 Conserved region in glutamate synthase GQS55_RS16295 PF04898 Glutamate synthase central domain GQS55_RS16295 PF00310 Glutamine amidotransferases class-II GQS55_RS16300 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS16300 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GQS55_RS16305 PF03553 Na+/H+ antiporter family GQS55_RS16310 PF00186 Dihydrofolate reductase GQS55_RS16325 PF01926 50S ribosome-binding GTPase GQS55_RS16325 PF01018 GTP1/OBG GQS55_RS16330 PF01016 Ribosomal L27 protein GQS55_RS16335 PF00829 Ribosomal prokaryotic L21 protein GQS55_RS16340 PF00348 Polyprenyl synthetase GQS55_RS16345 PF09905 DNA-binding protein VF530 GQS55_RS16355 PF01316 Arginine repressor, DNA binding domain GQS55_RS16355 PF02863 Arginine repressor, C-terminal domain GQS55_RS16360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS16360 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS16360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GQS55_RS16360 PF00672 HAMP domain GQS55_RS16360 PF00072 Response regulator receiver domain GQS55_RS16360 PF01627 Hpt domain GQS55_RS16365 PF01545 Cation efflux family GQS55_RS16370 PF01915 Glycosyl hydrolase family 3 C-terminal domain GQS55_RS16370 PF14310 Fibronectin type III-like domain GQS55_RS16370 PF00933 Glycosyl hydrolase family 3 N terminal domain GQS55_RS16380 PF01202 Shikimate kinase GQS55_RS16385 PF06165 Glycosyltransferase family 36 GQS55_RS16385 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain GQS55_RS16405 PF00933 Glycosyl hydrolase family 3 N terminal domain GQS55_RS16405 PF01915 Glycosyl hydrolase family 3 C-terminal domain GQS55_RS16405 PF14310 Fibronectin type III-like domain GQS55_RS16410 PF07690 Major Facilitator Superfamily GQS55_RS16415 PF00232 Glycosyl hydrolase family 1 GQS55_RS16425 PF00356 Bacterial regulatory proteins, lacI family GQS55_RS16435 PF01475 Ferric uptake regulator family GQS55_RS16450 PF07517 SecA DEAD-like domain GQS55_RS16450 PF01043 SecA preprotein cross-linking domain GQS55_RS16450 PF07516 SecA Wing and Scaffold domain GQS55_RS16450 PF02810 SEC-C motif GQS55_RS16455 PF07683 Cobalamin synthesis protein cobW C-terminal domain GQS55_RS16455 PF02492 CobW/HypB/UreG, nucleotide-binding domain GQS55_RS16465 PF00005 ABC transporter GQS55_RS16485 PF00376 MerR family regulatory protein GQS55_RS16485 PF09278 MerR, DNA binding GQS55_RS16490 PF02631 RecX family GQS55_RS16495 PF01979 Amidohydrolase family GQS55_RS16505 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GQS55_RS16550 PF02861 Clp amino terminal domain, pathogenicity island component GQS55_RS16550 PF17871 AAA lid domain GQS55_RS16550 PF07724 AAA domain (Cdc48 subfamily) GQS55_RS16550 PF00004 ATPase family associated with various cellular activities (AAA) GQS55_RS16550 PF10431 C-terminal, D2-small domain, of ClpB protein GQS55_RS16580 PF13356 Arm DNA-binding domain GQS55_RS16580 PF00589 Phage integrase family GQS55_RS16585 PF00118 TCP-1/cpn60 chaperonin family GQS55_RS16590 PF00166 Chaperonin 10 Kd subunit GQS55_RS16595 PF04186 FxsA cytoplasmic membrane protein GQS55_RS16605 PF11412 Disulphide bond corrector protein DsbC GQS55_RS16605 PF02683 Cytochrome C biogenesis protein transmembrane region GQS55_RS16610 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS16610 PF00563 EAL domain GQS55_RS16610 PF03707 Bacterial signalling protein N terminal repeat GQS55_RS16625 PF01220 Dehydroquinase class II GQS55_RS16630 PF00364 Biotin-requiring enzyme GQS55_RS16635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GQS55_RS16635 PF00289 Biotin carboxylase, N-terminal domain GQS55_RS16635 PF02785 Biotin carboxylase C-terminal domain GQS55_RS16650 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS16650 PF07660 Secretin and TonB N terminus short domain GQS55_RS16650 PF00593 TonB dependent receptor GQS55_RS16660 PF04055 Radical SAM superfamily GQS55_RS16660 PF13186 Iron-sulfur cluster-binding domain GQS55_RS16665 PF05402 Coenzyme PQQ synthesis protein D (PqqD) GQS55_RS16670 PF03070 TENA/THI-4/PQQC family GQS55_RS16675 PF12706 Beta-lactamase superfamily domain GQS55_RS16680 PF08042 PqqA family GQS55_RS16685 PF00561 alpha/beta hydrolase fold GQS55_RS16695 PF00403 Heavy-metal-associated domain GQS55_RS16700 PF00376 MerR family regulatory protein GQS55_RS16700 PF09278 MerR, DNA binding GQS55_RS16710 PF04545 Sigma-70, region 4 GQS55_RS16710 PF04539 Sigma-70 region 3 GQS55_RS16710 PF04542 Sigma-70 region 2 GQS55_RS16710 PF03979 Sigma-70 factor, region 1.1 GQS55_RS16710 PF04546 Sigma-70, non-essential region GQS55_RS16710 PF00140 Sigma-70 factor, region 1.2 GQS55_RS16715 PF08275 DNA primase catalytic core, N-terminal domain GQS55_RS16715 PF08278 DNA primase DnaG DnaB-binding GQS55_RS16715 PF01807 CHC2 zinc finger GQS55_RS16715 PF10410 DnaB-helicase binding domain of primase GQS55_RS16720 PF01281 Ribosomal protein L9, N-terminal domain GQS55_RS16720 PF03948 Ribosomal protein L9, C-terminal domain GQS55_RS16725 PF01084 Ribosomal protein S18 GQS55_RS16730 PF00436 Single-strand binding protein family GQS55_RS16735 PF01250 Ribosomal protein S6 GQS55_RS16740 PF00873 AcrB/AcrD/AcrF family GQS55_RS16750 PF02321 Outer membrane efflux protein GQS55_RS16760 PF00588 SpoU rRNA Methylase family GQS55_RS16760 PF08032 RNA 2'-O ribose methyltransferase substrate binding GQS55_RS16765 PF00773 RNB domain GQS55_RS16765 PF08461 Ribonuclease R winged-helix domain GQS55_RS16765 PF17876 Cold shock domain GQS55_RS16765 PF08206 Ribonuclease B OB domain GQS55_RS16765 PF00575 S1 RNA binding domain GQS55_RS16770 PF08238 Sel1 repeat GQS55_RS16775 PF11871 Domain of unknown function (DUF3391) GQS55_RS16775 PF01966 HD domain GQS55_RS16780 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS16785 PF01521 Iron-sulphur cluster biosynthesis GQS55_RS16790 PF00654 Voltage gated chloride channel GQS55_RS16800 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GQS55_RS16800 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GQS55_RS16805 PF00202 Aminotransferase class-III GQS55_RS16815 PF03454 MoeA C-terminal region (domain IV) GQS55_RS16815 PF00994 Probable molybdopterin binding domain GQS55_RS16815 PF03453 MoeA N-terminal region (domain I and II) GQS55_RS16820 PF04055 Radical SAM superfamily GQS55_RS16820 PF06463 Molybdenum Cofactor Synthesis C GQS55_RS16825 PF12804 MobA-like NTP transferase domain GQS55_RS16830 PF00994 Probable molybdopterin binding domain GQS55_RS16835 PF01967 MoaC family GQS55_RS16840 PF02597 ThiS family GQS55_RS16845 PF02391 MoaE protein GQS55_RS16855 PF00528 Binding-protein-dependent transport system inner membrane component GQS55_RS16860 PF03459 TOBE domain GQS55_RS16860 PF00005 ABC transporter GQS55_RS16865 PF00899 ThiF family GQS55_RS16870 PF04957 Ribosome modulation factor GQS55_RS16890 PF00392 Bacterial regulatory proteins, gntR family GQS55_RS16925 PF00892 EamA-like transporter family GQS55_RS16930 PF00270 DEAD/DEAH box helicase GQS55_RS16930 PF00271 Helicase conserved C-terminal domain GQS55_RS16930 PF00570 HRDC domain GQS55_RS16930 PF09382 RQC domain GQS55_RS16930 PF16124 RecQ zinc-binding GQS55_RS16985 PF00117 Glutamine amidotransferase class-I GQS55_RS16985 PF00958 GMP synthase C terminal domain GQS55_RS16985 PF02540 NAD synthase GQS55_RS16990 PF00571 CBS domain GQS55_RS16990 PF00478 IMP dehydrogenase / GMP reductase domain GQS55_RS16995 PF13742 OB-fold nucleic acid binding domain GQS55_RS16995 PF02601 Exonuclease VII, large subunit GQS55_RS17005 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GQS55_RS17005 PF01926 50S ribosome-binding GTPase GQS55_RS17010 PF13360 PQQ-like domain GQS55_RS17015 PF09976 Tetratricopeptide repeat-like domain GQS55_RS17020 PF03129 Anticodon binding domain GQS55_RS17020 PF13393 Histidyl-tRNA synthetase GQS55_RS17025 PF04551 GcpE protein GQS55_RS17040 PF04055 Radical SAM superfamily GQS55_RS17045 PF00334 Nucleoside diphosphate kinase GQS55_RS17055 PF00501 AMP-binding enzyme GQS55_RS17055 PF13193 AMP-binding enzyme C-terminal domain GQS55_RS17060 PF00072 Response regulator receiver domain GQS55_RS17060 PF13188 PAS domain GQS55_RS17060 PF08448 PAS fold GQS55_RS17060 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS17060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS17065 PF00072 Response regulator receiver domain GQS55_RS17065 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS17070 PF03949 Malic enzyme, NAD binding domain GQS55_RS17070 PF00390 Malic enzyme, N-terminal domain GQS55_RS17075 PF04384 Iron-sulphur cluster assembly GQS55_RS17085 PF01037 Lrp/AsnC ligand binding domain GQS55_RS17085 PF13404 AsnC-type helix-turn-helix domain GQS55_RS17090 PF02580 D-Tyr-tRNA(Tyr) deacylase GQS55_RS17095 PF03631 Virulence factor BrkB GQS55_RS17110 PF03951 Glutamine synthetase, beta-Grasp domain GQS55_RS17110 PF00120 Glutamine synthetase, catalytic domain GQS55_RS17120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS17120 PF00989 PAS fold GQS55_RS17120 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS17125 PF00072 Response regulator receiver domain GQS55_RS17125 PF02954 Bacterial regulatory protein, Fis family GQS55_RS17125 PF00158 Sigma-54 interaction domain GQS55_RS17135 PF00152 tRNA synthetases class II (D, K and N) GQS55_RS17140 PF03143 Elongation factor Tu C-terminal domain GQS55_RS17140 PF03144 Elongation factor Tu domain 2 GQS55_RS17140 PF00009 Elongation factor Tu GTP binding domain GQS55_RS17145 PF00679 Elongation factor G C-terminus GQS55_RS17145 PF14492 Elongation Factor G, domain II GQS55_RS17145 PF03144 Elongation factor Tu domain 2 GQS55_RS17145 PF00009 Elongation factor Tu GTP binding domain GQS55_RS17145 PF03764 Elongation factor G, domain IV GQS55_RS17150 PF00177 Ribosomal protein S7p/S5e GQS55_RS17155 PF00164 Ribosomal protein S12/S23 GQS55_RS17160 PF04998 RNA polymerase Rpb1, domain 5 GQS55_RS17160 PF05000 RNA polymerase Rpb1, domain 4 GQS55_RS17160 PF04983 RNA polymerase Rpb1, domain 3 GQS55_RS17160 PF00623 RNA polymerase Rpb1, domain 2 GQS55_RS17160 PF04997 RNA polymerase Rpb1, domain 1 GQS55_RS17165 PF04560 RNA polymerase Rpb2, domain 7 GQS55_RS17165 PF10385 RNA polymerase beta subunit external 1 domain GQS55_RS17165 PF04565 RNA polymerase Rpb2, domain 3 GQS55_RS17165 PF00562 RNA polymerase Rpb2, domain 6 GQS55_RS17165 PF04561 RNA polymerase Rpb2, domain 2 GQS55_RS17165 PF04563 RNA polymerase beta subunit GQS55_RS17170 PF00542 Ribosomal protein L7/L12 C-terminal domain GQS55_RS17170 PF16320 Ribosomal protein L7/L12 dimerisation domain GQS55_RS17175 PF00466 Ribosomal protein L10 GQS55_RS17180 PF00687 Ribosomal protein L1p/L10e family GQS55_RS17185 PF00298 Ribosomal protein L11, RNA binding domain GQS55_RS17185 PF03946 Ribosomal protein L11, N-terminal domain GQS55_RS17190 PF02357 Transcription termination factor nusG GQS55_RS17190 PF00467 KOW motif GQS55_RS17195 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GQS55_RS17205 PF02080 TrkA-C domain GQS55_RS17205 PF03471 Transporter associated domain GQS55_RS17205 PF00999 Sodium/hydrogen exchanger family GQS55_RS17210 PF00009 Elongation factor Tu GTP binding domain GQS55_RS17210 PF03143 Elongation factor Tu C-terminal domain GQS55_RS17210 PF03144 Elongation factor Tu domain 2 GQS55_RS17235 PF03309 Type III pantothenate kinase GQS55_RS17240 PF08279 HTH domain GQS55_RS17240 PF03099 Biotin/lipoate A/B protein ligase family GQS55_RS17240 PF02237 Biotin protein ligase C terminal domain GQS55_RS17245 PF01565 FAD binding domain GQS55_RS17245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GQS55_RS17290 PF05958 tRNA (Uracil-5-)-methyltransferase GQS55_RS17295 PF00440 Bacterial regulatory proteins, tetR family GQS55_RS17305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GQS55_RS17305 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS17315 PF00390 Malic enzyme, N-terminal domain GQS55_RS17315 PF03949 Malic enzyme, NAD binding domain GQS55_RS17320 PF00366 Ribosomal protein S17 GQS55_RS17325 PF00831 Ribosomal L29 protein GQS55_RS17330 PF00252 Ribosomal protein L16p/L10e GQS55_RS17335 PF00189 Ribosomal protein S3, C-terminal domain GQS55_RS17335 PF07650 KH domain GQS55_RS17340 PF00237 Ribosomal protein L22p/L17e GQS55_RS17345 PF00203 Ribosomal protein S19 GQS55_RS17350 PF00181 Ribosomal Proteins L2, RNA binding domain GQS55_RS17350 PF03947 Ribosomal Proteins L2, C-terminal domain GQS55_RS17355 PF00276 Ribosomal protein L23 GQS55_RS17360 PF00573 Ribosomal protein L4/L1 family GQS55_RS17365 PF00297 Ribosomal protein L3 GQS55_RS17370 PF00338 Ribosomal protein S10p/S20e GQS55_RS17375 PF00501 AMP-binding enzyme GQS55_RS17375 PF13193 AMP-binding enzyme C-terminal domain GQS55_RS17380 PF03144 Elongation factor Tu domain 2 GQS55_RS17380 PF00679 Elongation factor G C-terminus GQS55_RS17380 PF00009 Elongation factor Tu GTP binding domain GQS55_RS17380 PF03764 Elongation factor G, domain IV GQS55_RS17380 PF14492 Elongation Factor G, domain II GQS55_RS17385 PF12852 Cupin GQS55_RS17385 PF12833 Helix-turn-helix domain GQS55_RS17390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GQS55_RS17390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GQS55_RS17420 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GQS55_RS17420 PF02844 Phosphoribosylglycinamide synthetase, N domain GQS55_RS17420 PF02843 Phosphoribosylglycinamide synthetase, C domain GQS55_RS17430 PF02142 MGS-like domain GQS55_RS17430 PF01808 AICARFT/IMPCHase bienzyme GQS55_RS17435 PF02954 Bacterial regulatory protein, Fis family GQS55_RS17440 PF01207 Dihydrouridine synthase (Dus) GQS55_RS17460 PF17151 Periplasmic sensor domain GQS55_RS17460 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS17470 PF03737 Aldolase/RraA GQS55_RS17475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GQS55_RS17475 PF10414 Sirohaem synthase dimerisation region GQS55_RS17510 PF00128 Alpha amylase, catalytic domain GQS55_RS17520 PF01061 ABC-2 type transporter GQS55_RS17525 PF00005 ABC transporter GQS55_RS17535 PF02563 Polysaccharide biosynthesis/export protein GQS55_RS17535 PF10531 SLBB domain GQS55_RS17545 PF05159 Capsule polysaccharide biosynthesis protein GQS55_RS17570 PF00753 Metallo-beta-lactamase superfamily GQS55_RS17575 PF04237 YjbR GQS55_RS17585 PF13180 PDZ domain GQS55_RS17585 PF17820 PDZ domain GQS55_RS17595 PF00579 tRNA synthetases class I (W and Y) GQS55_RS17600 PF00834 Ribulose-phosphate 3 epimerase family GQS55_RS17615 PF02086 D12 class N6 adenine-specific DNA methyltransferase GQS55_RS17625 PF01761 3-dehydroquinate synthase GQS55_RS17630 PF01202 Shikimate kinase GQS55_RS17635 PF07660 Secretin and TonB N terminus short domain GQS55_RS17635 PF11741 AMIN domain GQS55_RS17635 PF00263 Bacterial type II and III secretion system protein GQS55_RS17635 PF03958 Bacterial type II/III secretion system short domain GQS55_RS17660 PF00905 Penicillin binding protein transpeptidase domain GQS55_RS17660 PF00912 Transglycosylase GQS55_RS17660 PF17092 Penicillin-binding protein OB-like domain GQS55_RS17670 PF00583 Acetyltransferase (GNAT) family GQS55_RS17670 PF00696 Amino acid kinase family GQS55_RS17675 PF00206 Lyase GQS55_RS17675 PF14698 Argininosuccinate lyase C-terminal GQS55_RS17675 PF00583 Acetyltransferase (GNAT) family GQS55_RS17680 PF00764 Arginosuccinate synthase GQS55_RS17685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GQS55_RS17685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GQS55_RS17690 PF00696 Amino acid kinase family GQS55_RS17695 PF01118 Semialdehyde dehydrogenase, NAD binding domain GQS55_RS17695 PF02774 Semialdehyde dehydrogenase, dimerisation domain GQS55_RS17700 PF01546 Peptidase family M20/M25/M40 GQS55_RS17700 PF07687 Peptidase dimerisation domain GQS55_RS17730 PF03447 Homoserine dehydrogenase, NAD binding domain GQS55_RS17730 PF00742 Homoserine dehydrogenase GQS55_RS17730 PF00696 Amino acid kinase family GQS55_RS17735 PF01053 Cys/Met metabolism PLP-dependent enzyme GQS55_RS17745 PF01208 Uroporphyrinogen decarboxylase (URO-D) GQS55_RS17765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GQS55_RS17765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GQS55_RS17780 PF00589 Phage integrase family GQS55_RS17780 PF13495 Phage integrase, N-terminal SAM-like domain GQS55_RS17800 PF01548 Transposase GQS55_RS17800 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS17825 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS17825 PF01548 Transposase GQS55_RS17830 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS17830 PF01548 Transposase GQS55_RS17845 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS17845 PF01548 Transposase GQS55_RS17855 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA GQS55_RS17865 PF02371 Transposase IS116/IS110/IS902 family GQS55_RS17865 PF01548 Transposase GQS55_RS17930 PF00106 short chain dehydrogenase GQS55_RS17935 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GQS55_RS17935 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GQS55_RS17965 PF01906 Putative heavy-metal-binding GQS55_RS18000 PF01066 CDP-alcohol phosphatidyltransferase GQS55_RS18005 PF00005 ABC transporter GQS55_RS18015 PF13416 Bacterial extracellular solute-binding protein GQS55_RS18025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GQS55_RS18025 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS18030 PF00593 TonB dependent receptor GQS55_RS18030 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS18035 PF08000 Bacterial PH domain GQS55_RS18040 PF09526 Probable metal-binding protein (DUF2387) GQS55_RS18045 PF00005 ABC transporter GQS55_RS18045 PF12848 ABC transporter GQS55_RS18060 PF06794 Uncharacterised protein family (UPF0270) GQS55_RS18065 PF00459 Inositol monophosphatase family GQS55_RS18070 PF00293 NUDIX domain GQS55_RS18075 PF13419 Haloacid dehalogenase-like hydrolase GQS55_RS18085 PF03773 Predicted permease GQS55_RS18090 PF01022 Bacterial regulatory protein, arsR family GQS55_RS18095 PF07690 Major Facilitator Superfamily GQS55_RS18100 PF12729 Four helix bundle sensory module for signal transduction GQS55_RS18100 PF00672 HAMP domain GQS55_RS18100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS18110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS18110 PF00672 HAMP domain GQS55_RS18125 PF01593 Flavin containing amine oxidoreductase GQS55_RS18130 PF00106 short chain dehydrogenase GQS55_RS18140 PF00875 DNA photolyase GQS55_RS18140 PF03441 FAD binding domain of DNA photolyase GQS55_RS18150 PF12973 ChrR Cupin-like domain GQS55_RS18155 PF04545 Sigma-70, region 4 GQS55_RS18155 PF04542 Sigma-70 region 2 GQS55_RS18190 PF01370 NAD dependent epimerase/dehydratase family GQS55_RS18190 PF08338 Domain of unknown function (DUF1731) GQS55_RS18195 PF00245 Alkaline phosphatase GQS55_RS18200 PF00245 Alkaline phosphatase GQS55_RS18210 PF00881 Nitroreductase family GQS55_RS18225 PF00266 Aminotransferase class-V GQS55_RS18240 PF04055 Radical SAM superfamily GQS55_RS18240 PF06969 HemN C-terminal domain GQS55_RS18250 PF04220 Der GTPase activator (YihI) GQS55_RS18255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GQS55_RS18260 PF00551 Formyl transferase GQS55_RS18270 PF00462 Glutaredoxin GQS55_RS18270 PF08534 Redoxin GQS55_RS18280 PF17746 SfsA N-terminal OB domain GQS55_RS18280 PF03749 Sugar fermentation stimulation protein RE domain GQS55_RS18290 PF17200 Single Cache domain 2 GQS55_RS18290 PF07730 Histidine kinase GQS55_RS18295 PF03480 Bacterial extracellular solute-binding protein, family 7 GQS55_RS18305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GQS55_RS18335 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS18335 PF00072 Response regulator receiver domain GQS55_RS18340 PF00672 HAMP domain GQS55_RS18340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS18340 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS18345 PF07660 Secretin and TonB N terminus short domain GQS55_RS18345 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS18345 PF00593 TonB dependent receptor GQS55_RS18350 PF00709 Adenylosuccinate synthetase GQS55_RS18355 PF01145 SPFH domain / Band 7 family GQS55_RS18360 PF01145 SPFH domain / Band 7 family GQS55_RS18360 PF12221 Bacterial membrane protein N terminal GQS55_RS18365 PF16360 GTP-binding GTPase Middle Region GQS55_RS18365 PF13167 GTP-binding GTPase N-terminal GQS55_RS18365 PF01926 50S ribosome-binding GTPase GQS55_RS18370 PF17209 Hfq protein GQS55_RS18380 PF01119 DNA mismatch repair protein, C-terminal domain GQS55_RS18380 PF08676 MutL C terminal dimerisation domain GQS55_RS18385 PF01520 N-acetylmuramoyl-L-alanine amidase GQS55_RS18385 PF11741 AMIN domain GQS55_RS18390 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GQS55_RS18395 PF08331 Domain of unknown function (DUF1730) GQS55_RS18405 PF00929 Exonuclease GQS55_RS18410 PF03193 RsgA GTPase GQS55_RS18415 PF02666 Phosphatidylserine decarboxylase GQS55_RS18435 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS18435 PF00072 Response regulator receiver domain GQS55_RS18440 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS18440 PF00672 HAMP domain GQS55_RS18440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS18440 PF16527 Two-component sensor protein CpxA, periplasmic domain GQS55_RS18450 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS18450 PF00072 Response regulator receiver domain GQS55_RS18455 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS18455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS18455 PF00672 HAMP domain GQS55_RS18460 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS18460 PF00072 Response regulator receiver domain GQS55_RS18495 PF12419 SNF2 Helicase protein GQS55_RS18495 PF00271 Helicase conserved C-terminal domain GQS55_RS18495 PF00176 SNF2 family N-terminal domain GQS55_RS18500 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS18500 PF00593 TonB dependent receptor GQS55_RS18525 PF14319 Transposase zinc-binding domain GQS55_RS18525 PF04986 Putative transposase GQS55_RS18535 PF03755 YicC-like family, N-terminal region GQS55_RS18535 PF08340 Domain of unknown function (DUF1732) GQS55_RS18540 PF00311 Phosphoenolpyruvate carboxylase GQS55_RS18550 PF12729 Four helix bundle sensory module for signal transduction GQS55_RS18550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS18550 PF00672 HAMP domain GQS55_RS18555 PF01138 3' exoribonuclease family, domain 1 GQS55_RS18555 PF03725 3' exoribonuclease family, domain 2 GQS55_RS18560 PF00156 Phosphoribosyl transferase domain GQS55_RS18575 PF00561 alpha/beta hydrolase fold GQS55_RS18580 PF00156 Phosphoribosyl transferase domain GQS55_RS18590 PF01106 NifU-like domain GQS55_RS18590 PF01521 Iron-sulphur cluster biosynthesis GQS55_RS18610 PF02630 SCO1/SenC GQS55_RS18615 PF01040 UbiA prenyltransferase family GQS55_RS18640 PF00510 Cytochrome c oxidase subunit III GQS55_RS18645 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 GQS55_RS18650 PF00115 Cytochrome C and Quinol oxidase polypeptide I GQS55_RS18655 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GQS55_RS18655 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GQS55_RS18660 PF00717 Peptidase S24-like GQS55_RS18660 PF01726 LexA DNA binding domain GQS55_RS18665 PF01203 Type II secretion system (T2SS), protein N GQS55_RS18670 PF04612 Type II secretion system (T2SS), protein M GQS55_RS18675 PF05134 Type II secretion system (T2SS), protein L GQS55_RS18675 PF12693 GspL periplasmic domain GQS55_RS18680 PF07963 Prokaryotic N-terminal methylation motif GQS55_RS18680 PF08334 Type II secretion system (T2SS), protein G GQS55_RS18685 PF00437 Type II/IV secretion system protein GQS55_RS18690 PF03958 Bacterial type II/III secretion system short domain GQS55_RS18690 PF00263 Bacterial type II and III secretion system protein GQS55_RS18695 PF11356 Type II secretion system protein C GQS55_RS18700 PF01479 S4 domain GQS55_RS18705 PF01430 Hsp33 protein GQS55_RS18710 PF01293 Phosphoenolpyruvate carboxykinase GQS55_RS18715 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS18715 PF00672 HAMP domain GQS55_RS18715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS18720 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS18720 PF00072 Response regulator receiver domain GQS55_RS18730 PF05552 Conserved TM helix GQS55_RS18730 PF00924 Mechanosensitive ion channel GQS55_RS18750 PF12833 Helix-turn-helix domain GQS55_RS18750 PF02311 AraC-like ligand binding domain GQS55_RS18755 PF01235 Sodium:alanine symporter family GQS55_RS18770 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS18775 PF01553 Acyltransferase GQS55_RS18780 PF05494 MlaC protein GQS55_RS18785 PF08361 MAATS-type transcriptional repressor, C-terminal region GQS55_RS18785 PF00440 Bacterial regulatory proteins, tetR family GQS55_RS18795 PF00107 Zinc-binding dehydrogenase GQS55_RS18795 PF08240 Alcohol dehydrogenase GroES-like domain GQS55_RS18800 PF16925 Tetracyclin repressor-like, C-terminal domain GQS55_RS18800 PF00440 Bacterial regulatory proteins, tetR family GQS55_RS18805 PF00107 Zinc-binding dehydrogenase GQS55_RS18805 PF08240 Alcohol dehydrogenase GroES-like domain GQS55_RS18815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS18815 PF07730 Histidine kinase GQS55_RS18820 PF00196 Bacterial regulatory proteins, luxR family GQS55_RS18820 PF00072 Response regulator receiver domain GQS55_RS18825 PF00990 Diguanylate cyclase, GGDEF domain GQS55_RS18825 PF13426 PAS domain GQS55_RS18825 PF00563 EAL domain GQS55_RS18840 PF01292 Prokaryotic cytochrome b561 GQS55_RS18845 PF01546 Peptidase family M20/M25/M40 GQS55_RS18845 PF07687 Peptidase dimerisation domain GQS55_RS18850 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GQS55_RS18860 PF03480 Bacterial extracellular solute-binding protein, family 7 GQS55_RS18865 PF01040 UbiA prenyltransferase family GQS55_RS18870 PF04345 Chorismate lyase GQS55_RS18880 PF00691 OmpA family GQS55_RS18880 PF05736 OprF membrane domain GQS55_RS18885 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GQS55_RS18885 PF01694 Rhomboid family GQS55_RS18890 PF00581 Rhodanese-like domain GQS55_RS18895 PF08240 Alcohol dehydrogenase GroES-like domain GQS55_RS18895 PF00107 Zinc-binding dehydrogenase GQS55_RS18900 PF00155 Aminotransferase class I and II GQS55_RS18905 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GQS55_RS18920 PF00440 Bacterial regulatory proteins, tetR family GQS55_RS18920 PF08360 QacR-like protein, C-terminal region GQS55_RS18925 PF01467 Cytidylyltransferase-like GQS55_RS18935 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GQS55_RS18935 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GQS55_RS18935 PF06827 Zinc finger found in FPG and IleRS GQS55_RS18945 PF00471 Ribosomal protein L33 GQS55_RS18950 PF00830 Ribosomal L28 family GQS55_RS18955 PF04002 RadC-like JAB domain GQS55_RS18960 PF02441 Flavoprotein GQS55_RS18960 PF04127 DNA / pantothenate metabolism flavoprotein GQS55_RS18965 PF00440 Bacterial regulatory proteins, tetR family GQS55_RS18970 PF01546 Peptidase family M20/M25/M40 GQS55_RS18970 PF07687 Peptidase dimerisation domain GQS55_RS18975 PF00072 Response regulator receiver domain GQS55_RS18975 PF00196 Bacterial regulatory proteins, luxR family GQS55_RS18980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS18980 PF00672 HAMP domain GQS55_RS18980 PF00072 Response regulator receiver domain GQS55_RS18980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GQS55_RS18980 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS18980 PF01627 Hpt domain GQS55_RS18985 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS19005 PF01339 CheB methylesterase GQS55_RS19005 PF00072 Response regulator receiver domain GQS55_RS19020 PF00474 Sodium:solute symporter family GQS55_RS19040 PF00883 Cytosol aminopeptidase family, catalytic domain GQS55_RS19040 PF02789 Cytosol aminopeptidase family, N-terminal domain GQS55_RS19045 PF12729 Four helix bundle sensory module for signal transduction GQS55_RS19045 PF00672 HAMP domain GQS55_RS19045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS19055 PF17200 Single Cache domain 2 GQS55_RS19055 PF00672 HAMP domain GQS55_RS19055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GQS55_RS19060 PF09371 Tex-like protein N-terminal domain GQS55_RS19060 PF16921 Tex protein YqgF-like domain GQS55_RS19060 PF00575 S1 RNA binding domain GQS55_RS19060 PF17674 HHH domain GQS55_RS19065 PF02627 Carboxymuconolactone decarboxylase family GQS55_RS19070 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GQS55_RS19070 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GQS55_RS19075 PF03449 Transcription elongation factor, N-terminal GQS55_RS19075 PF01272 Transcription elongation factor, GreA/GreB, C-term GQS55_RS19085 PF00155 Aminotransferase class I and II GQS55_RS19090 PF00625 Guanylate kinase GQS55_RS19095 PF01192 RNA polymerase Rpb6 GQS55_RS19100 PF13291 ACT domain GQS55_RS19100 PF04607 Region found in RelA / SpoT proteins GQS55_RS19100 PF02824 TGS domain GQS55_RS19105 PF01042 Endoribonuclease L-PSP GQS55_RS19110 PF00588 SpoU rRNA Methylase family GQS55_RS19110 PF12105 SpoU, rRNA methylase, C-terminal GQS55_RS19115 PF00270 DEAD/DEAH box helicase GQS55_RS19115 PF00271 Helicase conserved C-terminal domain GQS55_RS19115 PF17191 RecG wedge domain GQS55_RS19125 PF01612 3'-5' exonuclease GQS55_RS19125 PF01367 5'-3' exonuclease, C-terminal SAM fold GQS55_RS19125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GQS55_RS19125 PF00476 DNA polymerase family A GQS55_RS19140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GQS55_RS19140 PF07992 Pyridine nucleotide-disulphide oxidoreductase GQS55_RS19145 PF01432 Peptidase family M3 GQS55_RS19155 PF04445 Putative SAM-dependent methyltransferase GQS55_RS19165 PF00072 Response regulator receiver domain GQS55_RS19165 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS19170 PF00675 Insulinase (Peptidase family M16) GQS55_RS19170 PF05193 Peptidase M16 inactive domain GQS55_RS19170 PF16187 Middle or third domain of peptidase_M16 GQS55_RS19175 PF00962 Adenosine/AMP deaminase GQS55_RS19190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS19190 PF03466 LysR substrate binding domain GQS55_RS19200 PF00909 Ammonium Transporter Family GQS55_RS19200 PF00672 HAMP domain GQS55_RS19205 PF02441 Flavoprotein GQS55_RS19210 PF00210 Ferritin-like domain GQS55_RS19230 PF02899 Phage integrase, N-terminal SAM-like domain GQS55_RS19230 PF00589 Phage integrase family GQS55_RS19245 PF00561 alpha/beta hydrolase fold GQS55_RS19250 PF02899 Phage integrase, N-terminal SAM-like domain GQS55_RS19250 PF00589 Phage integrase family GQS55_RS19290 PF01627 Hpt domain GQS55_RS19290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS19290 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS19290 PF00072 Response regulator receiver domain GQS55_RS19295 PF00072 Response regulator receiver domain GQS55_RS19300 PF00440 Bacterial regulatory proteins, tetR family GQS55_RS19360 PF02798 Glutathione S-transferase, N-terminal domain GQS55_RS19365 PF04545 Sigma-70, region 4 GQS55_RS19365 PF04542 Sigma-70 region 2 GQS55_RS19365 PF00140 Sigma-70 factor, region 1.2 GQS55_RS19370 PF18075 FtsX extracellular domain GQS55_RS19375 PF00005 ABC transporter GQS55_RS19380 PF00448 SRP54-type protein, GTPase domain GQS55_RS19380 PF02881 SRP54-type protein, helical bundle domain GQS55_RS19390 PF00144 Beta-lactamase GQS55_RS19395 PF04222 Protein of unknown function (DUF416) GQS55_RS19410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS19410 PF03466 LysR substrate binding domain GQS55_RS19415 PF00107 Zinc-binding dehydrogenase GQS55_RS19415 PF08240 Alcohol dehydrogenase GroES-like domain GQS55_RS19420 PF00756 Putative esterase GQS55_RS19430 PF00593 TonB dependent receptor GQS55_RS19430 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS19455 PF02492 CobW/HypB/UreG, nucleotide-binding domain GQS55_RS19455 PF07683 Cobalamin synthesis protein cobW C-terminal domain GQS55_RS19460 PF13419 Haloacid dehalogenase-like hydrolase GQS55_RS19470 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS19470 PF00593 TonB dependent receptor GQS55_RS19475 PF00512 His Kinase A (phospho-acceptor) domain GQS55_RS19475 PF16527 Two-component sensor protein CpxA, periplasmic domain GQS55_RS19475 PF00672 HAMP domain GQS55_RS19475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GQS55_RS19480 PF00072 Response regulator receiver domain GQS55_RS19480 PF00486 Transcriptional regulatory protein, C terminal GQS55_RS19485 PF01047 MarR family GQS55_RS19490 PF00529 HlyD membrane-fusion protein of T1SS GQS55_RS19490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GQS55_RS19510 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GQS55_RS19515 PF00510 Cytochrome c oxidase subunit III GQS55_RS19525 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GQS55_RS19525 PF06481 COX Aromatic Rich Motif GQS55_RS19535 PF04052 TolB amino-terminal domain GQS55_RS19535 PF07676 WD40-like Beta Propeller Repeat GQS55_RS19540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GQS55_RS19540 PF03466 LysR substrate binding domain GQS55_RS19545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GQS55_RS19550 PF02798 Glutathione S-transferase, N-terminal domain GQS55_RS19555 PF01380 SIS domain GQS55_RS19560 PF08220 DeoR-like helix-turn-helix domain GQS55_RS19560 PF00455 DeoR C terminal sensor domain GQS55_RS19570 PF14602 Hexapeptide repeat of succinyl-transferase GQS55_RS19570 PF12804 MobA-like NTP transferase domain GQS55_RS19570 PF00132 Bacterial transferase hexapeptide (six repeats) GQS55_RS19585 PF12557 Cob(I)alamin adenosyltransferase N terminal GQS55_RS19585 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GQS55_RS19600 PF02514 CobN/Magnesium Chelatase GQS55_RS19605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GQS55_RS19605 PF07685 CobB/CobQ-like glutamine amidotransferase domain GQS55_RS19615 PF00300 Histidine phosphatase superfamily (branch 1) GQS55_RS19620 PF03186 CobD/Cbib protein GQS55_RS19620 PF17113 Regulatory signalling modulator protein AmpE GQS55_RS19625 PF00155 Aminotransferase class I and II GQS55_RS19630 PF07715 TonB-dependent Receptor Plug Domain GQS55_RS19630 PF00593 TonB dependent receptor GQS55_RS19640 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GQS55_RS19645 PF02654 Cobalamin-5-phosphate synthase GQS55_RS19660 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GQS55_RS19660 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GQS55_RS19665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GQS55_RS19665 PF02874 ATP synthase alpha/beta family, beta-barrel domain GQS55_RS19670 PF00231 ATP synthase GQS55_RS19675 PF00306 ATP synthase alpha/beta chain, C terminal domain GQS55_RS19675 PF02874 ATP synthase alpha/beta family, beta-barrel domain GQS55_RS19675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GQS55_RS19680 PF00213 ATP synthase delta (OSCP) subunit GQS55_RS19685 PF00430 ATP synthase B/B' CF(0) GQS55_RS19700 PF03899 ATP synthase I chain GQS55_RS19705 PF02195 ParB-like nuclease domain GQS55_RS19705 PF17762 HTH domain found in ParB protein GQS55_RS19710 PF13614 AAA domain GQS55_RS19715 PF02527 rRNA small subunit methyltransferase G GQS55_RS19720 PF13932 GidA associated domain GQS55_RS19720 PF01134 Glucose inhibited division protein A GQS55_RS19725 PF00258 Flavodoxin GQS55_RS19740 PF12631 MnmE helical domain GQS55_RS19740 PF01926 50S ribosome-binding GTPase GQS55_RS19740 PF10396 GTP-binding protein TrmE N-terminus GQS55_RS19745 PF02096 60Kd inner membrane protein GQS55_RS19745 PF14849 YidC periplasmic domain GQS55_RS19750 PF01809 Putative membrane protein insertion efficiency factor GQS55_RS19755 PF00825 Ribonuclease P GQS55_RS19760 PF00468 Ribosomal protein L34