locus-tag class description CCASEI_RS00010 PF00308 Bacterial dnaA protein CCASEI_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix CCASEI_RS00020 PF00712 DNA polymerase III beta subunit, N-terminal domain CCASEI_RS00020 PF02767 DNA polymerase III beta subunit, central domain CCASEI_RS00020 PF02768 DNA polymerase III beta subunit, C-terminal domain CCASEI_RS00065 PF00872 Transposase, Mutator family CCASEI_RS00095 PF03989 DNA gyrase C-terminal domain, beta-propeller CCASEI_RS00095 PF00521 DNA gyrase/topoisomerase IV, subunit A CCASEI_RS00255 PF00795 Carbon-nitrogen hydrolase CCASEI_RS00435 PF00239 Resolvase, N terminal domain CCASEI_RS00435 PF02796 Helix-turn-helix domain of resolvase CCASEI_RS00525 PF00872 Transposase, Mutator family CCASEI_RS00535 PF13276 HTH-like domain CCASEI_RS00535 PF00665 Integrase core domain CCASEI_RS00535 PF13333 Integrase core domain CCASEI_RS00570 PF04945 YHS domain CCASEI_RS00760 PF08267 Cobalamin-independent synthase, N-terminal domain CCASEI_RS00760 PF01717 Cobalamin-independent synthase, Catalytic domain CCASEI_RS00765 PF01717 Cobalamin-independent synthase, Catalytic domain CCASEI_RS00765 PF08267 Cobalamin-independent synthase, N-terminal domain CCASEI_RS00775 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCASEI_RS00955 PF00746 LPXTG cell wall anchor motif CCASEI_RS00955 PF16555 Gram-positive pilin subunit D1, N-terminal domain CCASEI_RS01480 PF13276 HTH-like domain CCASEI_RS01480 PF00665 Integrase core domain CCASEI_RS01480 PF13333 Integrase core domain CCASEI_RS01750 PF12169 DNA polymerase III subunits gamma and tau domain III CCASEI_RS01935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CCASEI_RS02085 PF16363 GDP-mannose 4,6 dehydratase CCASEI_RS02300 PF02541 Ppx/GppA phosphatase family CCASEI_RS02310 PF14748 Pyrroline-5-carboxylate reductase dimerisation CCASEI_RS02310 PF03807 NADP oxidoreductase coenzyme F420-dependent CCASEI_RS02335 PF14824 Sirohaem biosynthesis protein central CCASEI_RS02335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCASEI_RS02335 PF10414 Sirohaem synthase dimerisation region CCASEI_RS02385 PF00202 Aminotransferase class-III CCASEI_RS02460 PF00501 AMP-binding enzyme CCASEI_RS02460 PF13193 AMP-binding enzyme C-terminal domain CCASEI_RS02700 PF04998 RNA polymerase Rpb1, domain 5 CCASEI_RS02700 PF04983 RNA polymerase Rpb1, domain 3 CCASEI_RS02700 PF00623 RNA polymerase Rpb1, domain 2 CCASEI_RS02700 PF04997 RNA polymerase Rpb1, domain 1 CCASEI_RS02730 PF03144 Elongation factor Tu domain 2 CCASEI_RS02730 PF00679 Elongation factor G C-terminus CCASEI_RS02730 PF14492 Elongation Factor G, domain II CCASEI_RS02730 PF03764 Elongation factor G, domain IV CCASEI_RS02730 PF00009 Elongation factor Tu GTP binding domain CCASEI_RS02745 PF00311 Phosphoenolpyruvate carboxylase CCASEI_RS02825 PF03947 Ribosomal Proteins L2, C-terminal domain CCASEI_RS02825 PF00181 Ribosomal Proteins L2, RNA binding domain CCASEI_RS03000 PF01416 tRNA pseudouridine synthase CCASEI_RS03045 PF00572 Ribosomal protein L13 CCASEI_RS03275 PF00005 ABC transporter CCASEI_RS03275 PF00664 ABC transporter transmembrane region CCASEI_RS03320 PF01053 Cys/Met metabolism PLP-dependent enzyme CCASEI_RS03485 PF03972 MmgE/PrpD family CCASEI_RS03605 PF01039 Carboxyl transferase domain CCASEI_RS03630 PF01266 FAD dependent oxidoreductase CCASEI_RS03665 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CCASEI_RS03665 PF02222 ATP-grasp domain CCASEI_RS03740 PF08501 Shikimate dehydrogenase substrate binding domain CCASEI_RS03740 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CCASEI_RS03740 PF03435 Saccharopine dehydrogenase NADP binding domain CCASEI_RS03795 PF13667 ThiC-associated domain CCASEI_RS03795 PF01964 Radical SAM ThiC family CCASEI_RS03805 PF01497 Periplasmic binding protein CCASEI_RS04025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CCASEI_RS04025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCASEI_RS04025 PF00205 Thiamine pyrophosphate enzyme, central domain CCASEI_RS04075 PF00171 Aldehyde dehydrogenase family CCASEI_RS04235 PF01202 Shikimate kinase CCASEI_RS04425 PF00501 AMP-binding enzyme CCASEI_RS04500 PF18019 HD domain CCASEI_RS04500 PF00270 DEAD/DEAH box helicase CCASEI_RS04500 PF18395 Cas3 C-terminal domain CCASEI_RS04740 PF00872 Transposase, Mutator family CCASEI_RS05170 PF08335 GlnD PII-uridylyltransferase CCASEI_RS05170 PF03710 Glutamate-ammonia ligase adenylyltransferase CCASEI_RS05370 PF00480 ROK family CCASEI_RS05525 PF08264 Anticodon-binding domain of tRNA CCASEI_RS05525 PF00133 tRNA synthetases class I (I, L, M and V) CCASEI_RS05640 PF00291 Pyridoxal-phosphate dependent enzyme CCASEI_RS05640 PF00585 C-terminal regulatory domain of Threonine dehydratase CCASEI_RS05750 PF01790 Prolipoprotein diacylglyceryl transferase CCASEI_RS05770 PF00343 Carbohydrate phosphorylase CCASEI_RS05800 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CCASEI_RS05800 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CCASEI_RS05820 PF06827 Zinc finger found in FPG and IleRS CCASEI_RS05820 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CCASEI_RS05820 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CCASEI_RS05830 PF06470 SMC proteins Flexible Hinge Domain CCASEI_RS05830 PF02463 RecF/RecN/SMC N terminal domain CCASEI_RS05850 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CCASEI_RS05920 PF16921 Tex protein YqgF-like domain CCASEI_RS05920 PF09371 Tex-like protein N-terminal domain CCASEI_RS05920 PF00575 S1 RNA binding domain CCASEI_RS05920 PF17674 HHH domain CCASEI_RS05965 PF10502 Signal peptidase, peptidase S26 CCASEI_RS05980 PF01078 Magnesium chelatase, subunit ChlI CCASEI_RS05980 PF13335 Magnesium chelatase, subunit ChlI C-terminal CCASEI_RS05990 PF17782 DprA winged helix domain CCASEI_RS05990 PF02481 DNA recombination-mediator protein A CCASEI_RS06135 PF03129 Anticodon binding domain CCASEI_RS06135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCASEI_RS06135 PF04073 Aminoacyl-tRNA editing domain CCASEI_RS06155 PF04760 Translation initiation factor IF-2, N-terminal region CCASEI_RS06155 PF11987 Translation-initiation factor 2 CCASEI_RS06155 PF00009 Elongation factor Tu GTP binding domain CCASEI_RS06210 PF00013 KH domain CCASEI_RS06210 PF00575 S1 RNA binding domain CCASEI_RS06210 PF01138 3' exoribonuclease family, domain 1 CCASEI_RS06210 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CCASEI_RS06240 PF09397 Ftsk gamma domain CCASEI_RS06240 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CCASEI_RS06240 PF01580 FtsK/SpoIIIE family CCASEI_RS06240 PF17854 FtsK alpha domain CCASEI_RS06260 PF03741 Integral membrane protein TerC family CCASEI_RS06315 PF00528 Binding-protein-dependent transport system inner membrane component CCASEI_RS06375 PF16360 GTP-binding GTPase Middle Region CCASEI_RS06375 PF01926 50S ribosome-binding GTPase CCASEI_RS06375 PF13167 GTP-binding GTPase N-terminal CCASEI_RS06430 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CCASEI_RS06430 PF00271 Helicase conserved C-terminal domain CCASEI_RS06430 PF04408 Helicase associated domain (HA2) CCASEI_RS06430 PF11898 Domain of unknown function (DUF3418) CCASEI_RS06430 PF00270 DEAD/DEAH box helicase CCASEI_RS06685 PF03129 Anticodon binding domain CCASEI_RS06685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCASEI_RS06685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCASEI_RS06770 PF02824 TGS domain CCASEI_RS06770 PF13291 ACT domain CCASEI_RS06770 PF04607 Region found in RelA / SpoT proteins CCASEI_RS06860 PF01411 tRNA synthetases class II (A) CCASEI_RS06860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCASEI_RS06860 PF02272 DHHA1 domain CCASEI_RS06910 PF01321 Creatinase/Prolidase N-terminal domain CCASEI_RS06910 PF00557 Metallopeptidase family M24 CCASEI_RS06995 PF07517 SecA DEAD-like domain CCASEI_RS06995 PF01043 SecA preprotein cross-linking domain CCASEI_RS06995 PF07516 SecA Wing and Scaffold domain CCASEI_RS07000 PF01043 SecA preprotein cross-linking domain CCASEI_RS07000 PF07516 SecA Wing and Scaffold domain CCASEI_RS07000 PF07517 SecA DEAD-like domain CCASEI_RS07135 PF00535 Glycosyl transferase family 2 CCASEI_RS07135 PF00795 Carbon-nitrogen hydrolase CCASEI_RS07335 PF00694 Aconitase C-terminal domain CCASEI_RS07335 PF00330 Aconitase family (aconitate hydratase) CCASEI_RS07400 PF01458 Uncharacterized protein family (UPF0051) CCASEI_RS07455 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CCASEI_RS07455 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CCASEI_RS07540 PF01029 NusB family CCASEI_RS07540 PF01189 16S rRNA methyltransferase RsmB/F CCASEI_RS07780 PF00206 Lyase CCASEI_RS07780 PF14698 Argininosuccinate lyase C-terminal CCASEI_RS07935 PF00476 DNA polymerase family A CCASEI_RS07935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CCASEI_RS07935 PF01367 5'-3' exonuclease, C-terminal SAM fold CCASEI_RS08615 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCASEI_RS08615 PF00306 ATP synthase alpha/beta chain, C terminal domain CCASEI_RS08615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCASEI_RS08670 PF00501 AMP-binding enzyme CCASEI_RS08670 PF13193 AMP-binding enzyme C-terminal domain CCASEI_RS08815 PF13175 AAA ATPase domain CCASEI_RS09080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CCASEI_RS09170 PF00375 Sodium:dicarboxylate symporter family CCASEI_RS09420 PF04237 YjbR CCASEI_RS09515 PF10415 Fumarase C C-terminus CCASEI_RS09515 PF00206 Lyase CCASEI_RS09645 PF03952 Enolase, N-terminal domain CCASEI_RS09645 PF00113 Enolase, C-terminal TIM barrel domain CCASEI_RS09665 PF02559 CarD-like/TRCF domain CCASEI_RS09665 PF00270 DEAD/DEAH box helicase CCASEI_RS09665 PF17757 UvrB interaction domain CCASEI_RS09665 PF03461 TRCF domain CCASEI_RS09665 PF00271 Helicase conserved C-terminal domain CCASEI_RS09865 PF16326 ABC transporter C-terminal domain CCASEI_RS09865 PF00005 ABC transporter CCASEI_RS09865 PF12848 ABC transporter CCASEI_RS10105 PF00342 Phosphoglucose isomerase CCASEI_RS10210 PF00474 Sodium:solute symporter family CCASEI_RS10235 PF00266 Aminotransferase class-V CCASEI_RS10250 PF00588 SpoU rRNA Methylase family CCASEI_RS10650 PF00271 Helicase conserved C-terminal domain CCASEI_RS10650 PF00270 DEAD/DEAH box helicase CCASEI_RS10705 PF07516 SecA Wing and Scaffold domain CCASEI_RS10705 PF01043 SecA preprotein cross-linking domain CCASEI_RS10705 PF07517 SecA DEAD-like domain CCASEI_RS10725 PF10647 Lipoprotein LpqB beta-propeller domain CCASEI_RS10725 PF10646 Sporulation and spore germination CCASEI_RS10785 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CCASEI_RS10785 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CCASEI_RS10840 PF00171 Aldehyde dehydrogenase family CCASEI_RS10995 PF00854 POT family CCASEI_RS11030 PF00872 Transposase, Mutator family CCASEI_RS11495 PF00069 Protein kinase domain CCASEI_RS11535 PF01336 OB-fold nucleic acid binding domain CCASEI_RS11535 PF02811 PHP domain CCASEI_RS11535 PF14579 Helix-hairpin-helix motif CCASEI_RS11535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CCASEI_RS11535 PF07733 Bacterial DNA polymerase III alpha NTPase domain CCASEI_RS11655 PF02350 UDP-N-acetylglucosamine 2-epimerase CCASEI_RS11785 PF07690 Major Facilitator Superfamily CCASEI_RS11795 PF08713 DNA alkylation repair enzyme CCASEI_RS12225 PF00156 Phosphoribosyl transferase domain CCASEI_RS12265 PF02769 AIR synthase related protein, C-terminal domain CCASEI_RS12265 PF00586 AIR synthase related protein, N-terminal domain CCASEI_RS12265 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CCASEI_RS12350 PF07690 Major Facilitator Superfamily CCASEI_RS12445 PF02378 Phosphotransferase system, EIIC CCASEI_RS12445 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CCASEI_RS12445 PF00367 phosphotransferase system, EIIB CCASEI_RS12595 PF00004 ATPase family associated with various cellular activities (AAA) CCASEI_RS12595 PF17862 AAA+ lid domain CCASEI_RS12595 PF01434 Peptidase family M41 CCASEI_RS12600 PF01434 Peptidase family M41 CCASEI_RS12600 PF17862 AAA+ lid domain CCASEI_RS12600 PF00004 ATPase family associated with various cellular activities (AAA) CCASEI_RS12680 PF13244 Domain of unknown function (DUF4040) CCASEI_RS12680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CCASEI_RS12680 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CCASEI_RS12680 PF00361 Proton-conducting membrane transporter CCASEI_RS12700 PF00361 Proton-conducting membrane transporter CCASEI_RS12755 PF07690 Major Facilitator Superfamily CCASEI_RS13110 PF08774 VRR-NUC domain CCASEI_RS13110 PF04851 Type III restriction enzyme, res subunit CCASEI_RS13290 PF02626 Carboxyltransferase domain, subdomain A and B CCASEI_RS13440 PF07690 Major Facilitator Superfamily CCASEI_RS13565 PF03796 DnaB-like helicase C terminal domain CCASEI_RS13570 PF14528 LAGLIDADG-like domain CCASEI_RS13570 PF00772 DnaB-like helicase N terminal domain CCASEI_RS13570 PF03796 DnaB-like helicase C terminal domain CCASEI_RS14025 PF00403 Heavy-metal-associated domain CCASEI_RS14225 PF00986 DNA gyrase B subunit, carboxyl terminus CCASEI_RS14225 PF01751 Toprim domain CCASEI_RS14225 PF00204 DNA gyrase B CCASEI_RS14225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCASEI_RS14400 PF00456 Transketolase, thiamine diphosphate binding domain CCASEI_RS14400 PF17831 Pyruvate dehydrogenase E1 component middle domain CCASEI_RS14410 PF13344 Haloacid dehalogenase-like hydrolase CCASEI_RS14410 PF18407 GCN5-related N-acetyltransferase like domain