NCgl0001	SM00382	ATPases associated with a variety of cellular activities
NCgl0001	SM00760	Bacterial dnaA protein helix-turn-helix domain
NCgl0002	SM00480	DNA polymerase III beta subunit
NCgl0005	SM00387	Histidine kinase-like ATPases
NCgl0005	SM00433	TopoisomeraseII
NCgl0012	SM00434	DNA Topoisomerase IV
NCgl0028	SM00382	ATPases associated with a variety of cellular activities
NCgl0031	SM00382	ATPases associated with a variety of cellular activities
NCgl0035	SM00342	helix_turn_helix, arabinose operon control protein
NCgl0037	SM00382	ATPases associated with a variety of cellular activities
NCgl0040	SM00220	Serine/Threonine protein kinases, catalytic domain
NCgl0040	SM00740	NCgl0040
NCgl0041	SM00220	Serine/Threonine protein kinases, catalytic domain
NCgl0044	SM00331	Sigma factor PP2C-like phosphatases
NCgl0044	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
NCgl0045	SM00240	Forkhead associated domain
NCgl0046	SM00240	Forkhead associated domain
NCgl0051	SM00450	Rhodanese Homology Domain
NCgl0051	SM00849	Metallo-beta-lactamase superfamily
NCgl0053	SM00450	Rhodanese Homology Domain
NCgl0054	SM00450	Rhodanese Homology Domain
NCgl0064	SM00670	Large family of predicted nucleotide-binding domains
NCgl0067	SM00387	Histidine kinase-like ATPases
NCgl0068	SM00448	cheY-homologous receiver domain
NCgl0071	SM00729	Elongator protein 3, MiaB family, Radical SAM
NCgl0071	SM00876	Biotin and Thiamin Synthesis associated domain
NCgl0082	SM00347	helix_turn_helix multiple antibiotic resistance protein
NCgl0086	SM00988	UreE urease accessory protein, N-terminal domain
NCgl0105	SM00420	helix_turn_helix, Deoxyribose operon repressor
NCgl0105	SM01134	NCgl0105
NCgl0110	SM00420	helix_turn_helix, Deoxyribose operon repressor
NCgl0110	SM01134	NCgl0110
NCgl0139	SM00487	DEAD-like helicases superfamily
NCgl0139	SM00490	helicase superfamily c-terminal domain
NCgl0139	SM00847	Helicase associated domain (HA2)  Add an annotation
NCgl0140	SM01266	NCgl0140
NCgl0154	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NCgl0154	SM00866	NCgl0154
NCgl0167	SM00354	helix_turn _helix lactose operon repressor
NCgl0171	SM00357	Cold shock protein domain
NCgl0176	SM00354	helix_turn _helix lactose operon repressor
NCgl0180	SM00091	PAS domain
NCgl0197	SM00382	ATPases associated with a variety of cellular activities
NCgl0200	SM00829	Enoylreductase
NCgl0205	SM00450	Rhodanese Homology Domain
NCgl0207	SM00852	Probable molybdopterin binding domain
NCgl0209	SM00852	Probable molybdopterin binding domain
NCgl0213	SM00382	ATPases associated with a variety of cellular activities
NCgl0219	SM00829	Enoylreductase
NCgl0221	SM00924	MgtE intracellular N domain
NCgl0239	SM00382	ATPases associated with a variety of cellular activities
NCgl0241	SM00278	Helix-hairpin-helix DNA-binding motif class 1
NCgl0241	SM00493	NCgl0241
NCgl0245	SM00917	LeuA allosteric (dimerisation) domain
NCgl0248	SM00859	Semialdehyde dehydrogenase, NAD binding domain
NCgl0251	SM01060	NCgl0251
NCgl0253	SM00344	helix_turn_helix ASNC type
NCgl0257	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NCgl0259	SM00226	Low molecular weight phosphatase family
NCgl0268	SM00448	cheY-homologous receiver domain
NCgl0268	SM00862	Transcriptional regulatory protein, C terminal
NCgl0269	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NCgl0269	SM00387	Histidine kinase-like ATPases
NCgl0269	SM00388	His Kinase A (phosphoacceptor) domain
NCgl0280	SM00347	helix_turn_helix multiple antibiotic resistance protein
NCgl0281	SM00822	NCgl0281
NCgl0285	SM00849	Metallo-beta-lactamase superfamily
NCgl0286	SM00100	Cyclic nucleotide-monophosphate binding domain
NCgl0286	SM00419	helix_turn_helix, cAMP Regulatory protein
NCgl0288	SM00478	endonuclease III
NCgl0288	SM00525	NCgl0288
NCgl0302	SM00487	DEAD-like helicases superfamily
NCgl0302	SM00490	helicase superfamily c-terminal domain
NCgl0303	SM00357	Cold shock protein domain
NCgl0304	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
NCgl0304	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
NCgl0304	SM00493	NCgl0304
NCgl0306	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
NCgl0306	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NCgl0307	SM00382	ATPases associated with a variety of cellular activities
NCgl0310	SM00363	S4 RNA-binding domain
NCgl0313	SM00829	Enoylreductase
NCgl0314	SM00849	Metallo-beta-lactamase superfamily
NCgl0324	SM00829	Enoylreductase
NCgl0334	SM00894	Excalibur calcium-binding domain
NCgl0338	SM00226	Low molecular weight phosphatase family
NCgl0351	SM00984	UDP binding domain
NCgl0358	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl0372	SM01133	NCgl0372
NCgl0380	SM00382	ATPases associated with a variety of cellular activities
NCgl0390	SM00855	Phosphoglycerate mutase family
NCgl0391	SM00387	Histidine kinase-like ATPases
NCgl0391	SM00388	His Kinase A (phosphoacceptor) domain
NCgl0392	SM00448	cheY-homologous receiver domain
NCgl0392	SM00862	Transcriptional regulatory protein, C terminal
NCgl0411	SM00382	ATPases associated with a variety of cellular activities
NCgl0416	SM01004	Delta-aminolevulinic acid dehydratase
NCgl0423	SM00855	Phosphoglycerate mutase family
NCgl0430	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NCgl0438	SM01130	NCgl0438
NCgl0449	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
NCgl0458	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
NCgl0459	SM00649	Ribosomal protein L11/L12
NCgl0472	SM00663	RNA polymerase I subunit A N-terminus
NCgl0474	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl0478	SM00838	Elongation factor G C-terminus
NCgl0478	SM00889	Elongation factor G, domain IV
NCgl0482	SM00382	ATPases associated with a variety of cellular activities
NCgl0486	SM01403	NCgl0486
NCgl0490	SM01382	NCgl0490
NCgl0490	SM01383	NCgl0490
NCgl0493	SM00322	K homology RNA-binding domain
NCgl0499	SM01374	NCgl0499
NCgl0500	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
NCgl0510	SM00382	ATPases associated with a variety of cellular activities
NCgl0527	SM00822	NCgl0527
NCgl0531	SM00346	helix_turn_helix isocitrate lyase regulation
NCgl0536	SM00316	Ribosomal protein S1-like RNA-binding domain
NCgl0539	SM00363	S4 RNA-binding domain
NCgl0539	SM01390	NCgl0539
NCgl0540	SM00662	RNA polymerases D
NCgl0552	SM00382	ATPases associated with a variety of cellular activities
NCgl0563	SM01005	Alanine racemase, C-terminal domain
NCgl0572	SM00883	Chaperonin 10 Kd subunit
NCgl0578	SM00116	Domain in cystathionine beta-synthase and other proteins.
NCgl0578	SM01240	NCgl0578
NCgl0579	SM01240	NCgl0579
NCgl0586	SM00421	helix_turn_helix, Lux Regulon
NCgl0586	SM00448	cheY-homologous receiver domain
NCgl0601	SM00347	helix_turn_helix multiple antibiotic resistance protein
NCgl0607	SM00382	ATPases associated with a variety of cellular activities
NCgl0609	SM00382	ATPases associated with a variety of cellular activities
NCgl0609	SM00930	NCgl0609
NCgl0611	SM00481	DNA polymerase alpha chain like domain
NCgl0614	SM00529	Helix-turn-helix diphteria tox regulatory element
NCgl0614	SM00899	NCgl0614
NCgl0632	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NCgl0632	SM00895	NCgl0632
NCgl0636	SM00382	ATPases associated with a variety of cellular activities
NCgl0645	SM00382	ATPases associated with a variety of cellular activities
NCgl0655	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl0659	SM00878	Biotin carboxylase C-terminal domain
NCgl0662	SM00833	Cobalamin synthesis protein cobW C-terminal domain
NCgl0668	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl0670	SM00878	Biotin carboxylase C-terminal domain
NCgl0671	SM00450	Rhodanese Homology Domain
NCgl0684	SM01001	AIR carboxylase
NCgl0698	SM00382	ATPases associated with a variety of cellular activities
NCgl0700	SM00487	DEAD-like helicases superfamily
NCgl0700	SM00490	helicase superfamily c-terminal domain
NCgl0705	SM00487	DEAD-like helicases superfamily
NCgl0705	SM00490	helicase superfamily c-terminal domain
NCgl0707	SM00487	DEAD-like helicases superfamily
NCgl0707	SM00490	helicase superfamily c-terminal domain
NCgl0719	SM00996	S-adenosyl-L-homocysteine hydrolase
NCgl0719	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
NCgl0721	SM00448	cheY-homologous receiver domain
NCgl0721	SM00862	Transcriptional regulatory protein, C terminal
NCgl0722	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NCgl0722	SM00387	Histidine kinase-like ATPases
NCgl0722	SM00388	His Kinase A (phosphoacceptor) domain
NCgl0723	SM00909	Sporulation and spore germination
NCgl0726	SM00957	SecA DEAD-like domain
NCgl0726	SM00958	SecA preprotein cross-linking domain
NCgl0737	SM00487	DEAD-like helicases superfamily
NCgl0737	SM00490	helicase superfamily c-terminal domain
NCgl0745	SM00341	Helicase and RNase D C-terminal
NCgl0753	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NCgl0767	SM00937	NCgl0767
NCgl0768	SM00382	ATPases associated with a variety of cellular activities
NCgl0775	SM00756	NCgl0775
NCgl0779	SM00382	ATPases associated with a variety of cellular activities
NCgl0782	SM00487	DEAD-like helicases superfamily
NCgl0782	SM00490	helicase superfamily c-terminal domain
NCgl0786	SM00357	Cold shock protein domain
NCgl0802	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NCgl0812	SM00487	DEAD-like helicases superfamily
NCgl0812	SM00490	helicase superfamily c-terminal domain
NCgl0813	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
NCgl0813	SM01232	NCgl0813
NCgl0818	SM00507	HNH nucleases
NCgl0819	SM00830	Chorismate mutase type II
NCgl0822	SM00382	ATPases associated with a variety of cellular activities
NCgl0827	SM00798	AICARFT/IMPCHase bienzyme
NCgl0827	SM00851	MGS-like domain
NCgl0836	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NCgl0839	SM00448	cheY-homologous receiver domain
NCgl0839	SM00862	Transcriptional regulatory protein, C terminal
NCgl0840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NCgl0840	SM00387	Histidine kinase-like ATPases
NCgl0840	SM00388	His Kinase A (phosphoacceptor) domain
NCgl0841	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NCgl0842	SM00852	Probable molybdopterin binding domain
NCgl0844	SM00858	NCgl0844
NCgl0847	SM00852	Probable molybdopterin binding domain
NCgl0853	SM00642	Alpha-amylase domain
NCgl0858	SM00487	DEAD-like helicases superfamily
NCgl0858	SM00490	helicase superfamily c-terminal domain
NCgl0869	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NCgl0872	SM01208	NCgl0872
NCgl0873	SM00650	Ribosomal RNA adenine dimethylases
NCgl0875	SM00382	ATPases associated with a variety of cellular activities
NCgl0896	SM00382	ATPases associated with a variety of cellular activities
NCgl0897	SM00382	ATPases associated with a variety of cellular activities
NCgl0900	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
NCgl0905	SM01400	NCgl0905
NCgl0909	SM00382	ATPases associated with a variety of cellular activities
NCgl0912	SM00421	helix_turn_helix, Lux Regulon
NCgl0912	SM00448	cheY-homologous receiver domain
NCgl0915	SM00382	ATPases associated with a variety of cellular activities
NCgl0918	SM00894	Excalibur calcium-binding domain
NCgl0924	SM00487	DEAD-like helicases superfamily
NCgl0924	SM00490	helicase superfamily c-terminal domain
NCgl0924	SM00982	NCgl0924
NCgl0924	SM01058	CarD-like/TRCF domain
NCgl0925	SM00382	ATPases associated with a variety of cellular activities
NCgl0926	SM00382	ATPases associated with a variety of cellular activities
NCgl0935	SM01192	NCgl0935
NCgl0935	SM01193	NCgl0935
NCgl0943	SM00342	helix_turn_helix, arabinose operon control protein
NCgl0960	SM00797	Allophanate hydrolase subunit 2
NCgl0961	SM00796	Allophanate hydrolase subunit 1
NCgl0965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NCgl0965	SM00895	NCgl0965
NCgl0968	SM00903	Flavin reductase like domain
NCgl0978	SM00327	von Willebrand factor (vWF) type A domain
NCgl0989	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl0994	SM00052	Putative diguanylate phosphodiesterase
NCgl0994	SM00091	PAS domain
NCgl0994	SM00267	diguanylate cyclase
NCgl1001	SM00860	SMI1 / KNR4 family
NCgl1011	SM00327	von Willebrand factor (vWF) type A domain
NCgl1013	SM00855	Phosphoglycerate mutase family
NCgl1016	SM00382	ATPases associated with a variety of cellular activities
NCgl1019	SM00347	helix_turn_helix multiple antibiotic resistance protein
NCgl1034	SM00382	ATPases associated with a variety of cellular activities
NCgl1040	SM00382	ATPases associated with a variety of cellular activities
NCgl1048	SM00020	Trypsin-like serine protease
NCgl1060	SM00507	HNH nucleases
NCgl1071	SM00640	Glycosyl hydrolases family 32
NCgl1080	SM00924	MgtE intracellular N domain
NCgl1084	SM00861	Transketolase, pyrimidine binding domain
NCgl1085	SM00382	ATPases associated with a variety of cellular activities
NCgl1101	SM00382	ATPases associated with a variety of cellular activities
NCgl1102	SM00382	ATPases associated with a variety of cellular activities
NCgl1105	SM00487	DEAD-like helicases superfamily
NCgl1105	SM00490	helicase superfamily c-terminal domain
NCgl1109	SM00487	DEAD-like helicases superfamily
NCgl1109	SM00490	helicase superfamily c-terminal domain
NCgl1117	SM00487	DEAD-like helicases superfamily
NCgl1117	SM00490	helicase superfamily c-terminal domain
NCgl1123	SM00867	YceI-like domain 
NCgl1124	SM00347	helix_turn_helix multiple antibiotic resistance protein
NCgl1127	SM00100	Cyclic nucleotide-monophosphate binding domain
NCgl1127	SM00419	helix_turn_helix, cAMP Regulatory protein
NCgl1130	SM00954	Region found in RelA / SpoT proteins
NCgl1132	SM00836	DALR anticodon binding domain
NCgl1132	SM01016	Arginyl tRNA synthetase N terminal dom
NCgl1142	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NCgl1144	SM00852	Probable molybdopterin binding domain
NCgl1145	SM00014	Acid phosphatase homologues
NCgl1147	SM00116	Domain in cystathionine beta-synthase and other proteins.
NCgl1147	SM01091	Transporter associated domain
NCgl1149	SM00852	Probable molybdopterin binding domain
NCgl1150	SM00729	Elongator protein 3, MiaB family, Radical SAM
NCgl1152	SM00382	ATPases associated with a variety of cellular activities
NCgl1152	SM00959	Rho termination factor, N-terminal domain
NCgl1153	SM00937	NCgl1153
NCgl1165	SM00382	ATPases associated with a variety of cellular activities
NCgl1175	SM00382	ATPases associated with a variety of cellular activities
NCgl1176	SM00062	Bacterial periplasmic substrate-binding proteins
NCgl1177	SM00642	Alpha-amylase domain
NCgl1178	SM00642	Alpha-amylase domain
NCgl1179	SM00382	ATPases associated with a variety of cellular activities
NCgl1182	SM00893	Electron transfer flavoprotein domain
NCgl1183	SM00893	Electron transfer flavoprotein domain
NCgl1187	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl1195	SM00479	NCgl1195
NCgl1196	SM00292	breast cancer carboxy-terminal domain
NCgl1196	SM00532	Ligase N family
NCgl1203	SM00354	helix_turn _helix lactose operon repressor
NCgl1204	SM00382	ATPases associated with a variety of cellular activities
NCgl1211	SM00845	GatB domain
NCgl1231	SM00903	Flavin reductase like domain
NCgl1237	SM01329	NCgl1237
NCgl1239	SM00100	Cyclic nucleotide-monophosphate binding domain
NCgl1239	SM00116	Domain in cystathionine beta-synthase and other proteins.
NCgl1240	SM00479	NCgl1240
NCgl1245	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl1257	SM00450	Rhodanese Homology Domain
NCgl1257	SM00849	Metallo-beta-lactamase superfamily
NCgl1260	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NCgl1261	SM00346	helix_turn_helix isocitrate lyase regulation
NCgl1264	SM00855	Phosphoglycerate mutase family
NCgl1270	SM00986	Uracil DNA glycosylase superfamily
NCgl1270	SM00987	UreE urease accessory protein, C-terminal domain 
NCgl1271	SM01120	NCgl1271
NCgl1271	SM01121	NCgl1271
NCgl1272	SM00487	DEAD-like helicases superfamily
NCgl1272	SM00490	helicase superfamily c-terminal domain
NCgl1276	SM00382	ATPases associated with a variety of cellular activities
NCgl1278	SM00062	Bacterial periplasmic substrate-binding proteins
NCgl1299	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
NCgl1299	SM00474	3'-5' exonuclease
NCgl1299	SM00475	5'-3' exonuclease
NCgl1299	SM00482	DNA polymerase A domain
NCgl1301	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl1304	SM00316	Ribosomal protein S1-like RNA-binding domain
NCgl1312	SM00354	helix_turn _helix lactose operon repressor
NCgl1315	SM00487	DEAD-like helicases superfamily
NCgl1315	SM00490	helicase superfamily c-terminal domain
NCgl1321	SM00849	Metallo-beta-lactamase superfamily
NCgl1332	SM00382	ATPases associated with a variety of cellular activities
NCgl1334	SM00967	RNA 2'-O ribose methyltransferase substrate binding
NCgl1336	SM00873	B3/4 domain
NCgl1336	SM00874	tRNA synthetase B5 domain
NCgl1336	SM00896	Ferredoxin-fold anticodon binding domain
NCgl1340	SM00859	Semialdehyde dehydrogenase, NAD binding domain
NCgl1349	SM00327	von Willebrand factor (vWF) type A domain
NCgl1357	SM00363	S4 RNA-binding domain
NCgl1365	SM00382	ATPases associated with a variety of cellular activities
NCgl1369	SM00450	Rhodanese Homology Domain
NCgl1371	SM00363	S4 RNA-binding domain
NCgl1375	SM00871	Bacterial transcription activator, effector binding domain
NCgl1378	SM00382	ATPases associated with a variety of cellular activities
NCgl1384	SM00957	SecA DEAD-like domain
NCgl1384	SM00958	SecA preprotein cross-linking domain
NCgl1385	SM00240	Forkhead associated domain
NCgl1386	SM00422	helix_turn_helix, mercury resistance
NCgl1388	SM00422	helix_turn_helix, mercury resistance
NCgl1393	SM01091	Transporter associated domain
NCgl1394	SM00487	DEAD-like helicases superfamily
NCgl1394	SM00490	helicase superfamily c-terminal domain
NCgl1396	SM01350	NCgl1396
NCgl1399	SM00382	ATPases associated with a variety of cellular activities
NCgl1404	SM00382	ATPases associated with a variety of cellular activities
NCgl1420	SM00867	YceI-like domain 
NCgl1432	SM00487	DEAD-like helicases superfamily
NCgl1432	SM00490	helicase superfamily c-terminal domain
NCgl1432	SM01142	NCgl1432
NCgl1440	SM00382	ATPases associated with a variety of cellular activities
NCgl1444	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl1450	SM01018	B12 binding domain
NCgl1454	SM00226	Low molecular weight phosphatase family
NCgl1455	SM00226	Low molecular weight phosphatase family
NCgl1467	SM00382	ATPases associated with a variety of cellular activities
NCgl1475	SM00244	prohibitin homologues
NCgl1488	SM00831	Cation transporter/ATPase, N-terminus
NCgl1490	SM00910	NCgl1490
NCgl1493	SM00382	ATPases associated with a variety of cellular activities
NCgl1506	SM00382	ATPases associated with a variety of cellular activities
NCgl1509	SM00487	DEAD-like helicases superfamily
NCgl1509	SM00490	helicase superfamily c-terminal domain
NCgl1510	SM00829	Enoylreductase
NCgl1512	SM00861	Transketolase, pyrimidine binding domain
NCgl1526	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
NCgl1530	SM00278	Helix-hairpin-helix DNA-binding motif class 1
NCgl1530	SM00465	GIY-YIG type nucleases (URI domain)
NCgl1543	SM01409	NCgl1543
NCgl1544	SM00072	Guanylate kinase homologues.
NCgl1546	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
NCgl1547	SM00851	MGS-like domain
NCgl1547	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
NCgl1548	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
NCgl1557	SM00841	Elongation factor P, C-terminal
NCgl1557	SM01185	NCgl1557
NCgl1563	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NCgl1566	SM00382	ATPases associated with a variety of cellular activities
NCgl1569	SM00732	Likely ribonuclease with RNase H fold.
NCgl1570	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
NCgl1571	SM00382	ATPases associated with a variety of cellular activities
NCgl1575	SM00487	DEAD-like helicases superfamily
NCgl1575	SM00490	helicase superfamily c-terminal domain
NCgl1586	SM00849	Metallo-beta-lactamase superfamily
NCgl1590	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NCgl1590	SM00954	Region found in RelA / SpoT proteins
NCgl1595	SM01323	NCgl1595
NCgl1596	SM00382	ATPases associated with a variety of cellular activities
NCgl1607	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
NCgl1623	SM00382	ATPases associated with a variety of cellular activities
NCgl1635	SM00736	Dystroglycan-type cadherin-like domains.
NCgl1645	SM00857	Resolvase, N terminal domain
NCgl1648	SM00195	Dual specificity phosphatase, catalytic domain
NCgl1650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NCgl1650	SM00895	NCgl1650
NCgl1669	SM00885	D5 N terminal like
NCgl1671	SM00990	NCgl1671
NCgl1673	SM00487	DEAD-like helicases superfamily
NCgl1682	SM00257	Lysin motif
NCgl1689	SM00382	ATPases associated with a variety of cellular activities
NCgl1716	SM00382	ATPases associated with a variety of cellular activities
NCgl1716	SM01086	C-terminal, D2-small domain, of ClpB protein
NCgl1730	SM00465	GIY-YIG type nucleases (URI domain)
NCgl1745	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl1769	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
NCgl1769	SM00493	NCgl1769
NCgl1770	SM00487	DEAD-like helicases superfamily
NCgl1779	SM00318	Staphylococcal nuclease homologues
NCgl1796	SM00020	Trypsin-like serine protease
NCgl1826	SM00341	Helicase and RNase D C-terminal
NCgl1826	SM00474	3'-5' exonuclease
NCgl1827	SM00861	Transketolase, pyrimidine binding domain
NCgl1839	SM00487	DEAD-like helicases superfamily
NCgl1845	SM00529	Helix-turn-helix diphteria tox regulatory element
NCgl1845	SM00899	NCgl1845
NCgl1849	SM00487	DEAD-like helicases superfamily
NCgl1849	SM00490	helicase superfamily c-terminal domain
NCgl1852	SM00382	ATPases associated with a variety of cellular activities
NCgl1852	SM00487	DEAD-like helicases superfamily
NCgl1852	SM00490	helicase superfamily c-terminal domain
NCgl1852	SM00847	Helicase associated domain (HA2)  Add an annotation
NCgl1856	SM00420	helix_turn_helix, Deoxyribose operon repressor
NCgl1856	SM01134	NCgl1856
NCgl1859	SM00420	helix_turn_helix, Deoxyribose operon repressor
NCgl1859	SM01134	NCgl1859
NCgl1863	SM00871	Bacterial transcription activator, effector binding domain
NCgl1874	SM00729	Elongator protein 3, MiaB family, Radical SAM
NCgl1875	SM00382	ATPases associated with a variety of cellular activities
NCgl1876	SM00062	Bacterial periplasmic substrate-binding proteins
NCgl1880	SM00382	ATPases associated with a variety of cellular activities
NCgl1884	SM00382	ATPases associated with a variety of cellular activities
NCgl1887	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl1893	SM00843	NCgl1893
NCgl1895	SM00849	Metallo-beta-lactamase superfamily
NCgl1896	SM01130	NCgl1896
NCgl1900	SM00316	Ribosomal protein S1-like RNA-binding domain
NCgl1900	SM00322	K homology RNA-binding domain
NCgl1901	SM01387	NCgl1901
NCgl1903	SM00904	Riboflavin kinase
NCgl1918	SM00382	ATPases associated with a variety of cellular activities
NCgl1921	SM00327	von Willebrand factor (vWF) type A domain
NCgl1922	SM00382	ATPases associated with a variety of cellular activities
NCgl1934	SM00421	helix_turn_helix, Lux Regulon
NCgl1934	SM00448	cheY-homologous receiver domain
NCgl1935	SM00387	Histidine kinase-like ATPases
NCgl1937	SM00382	ATPases associated with a variety of cellular activities
NCgl1939	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NCgl1943	SM00382	ATPases associated with a variety of cellular activities
NCgl1944	SM00729	Elongator protein 3, MiaB family, Radical SAM
NCgl1954	SM00382	ATPases associated with a variety of cellular activities
NCgl1966	SM00316	Ribosomal protein S1-like RNA-binding domain
NCgl1966	SM00732	Likely ribonuclease with RNase H fold.
NCgl1967	SM00354	helix_turn _helix lactose operon repressor
NCgl1969	SM00998	Adenylosuccinate lyase C-terminus
NCgl1977	SM00248	ankyrin repeats
NCgl1979	SM00382	ATPases associated with a variety of cellular activities
NCgl1980	SM00382	ATPases associated with a variety of cellular activities
NCgl1980	SM00962	SRP54-type protein, GTPase domain
NCgl1980	SM00963	SRP54-type protein, helical bundle domain
NCgl1981	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NCgl1982	SM00938	Nitrogen regulatory protein P-II
NCgl1984	SM00382	ATPases associated with a variety of cellular activities
NCgl1984	SM00962	SRP54-type protein, GTPase domain
NCgl1984	SM00963	SRP54-type protein, helical bundle domain
NCgl1986	SM00968	SMC proteins Flexible Hinge Domain
NCgl1993	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
NCgl1993	SM01232	NCgl1993
NCgl1994	SM00358	Double-stranded RNA binding motif
NCgl1994	SM00535	Ribonuclease III family
NCgl1997	SM00382	ATPases associated with a variety of cellular activities
NCgl1998	SM00382	ATPases associated with a variety of cellular activities
NCgl1999	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
NCgl2026	SM00642	Alpha-amylase domain
NCgl2030	SM00354	helix_turn _helix lactose operon repressor
NCgl2031	SM00382	ATPases associated with a variety of cellular activities
NCgl2035	SM00479	NCgl2035
NCgl2037	SM00642	Alpha-amylase domain
NCgl2038	SM00954	Region found in RelA / SpoT proteins
NCgl2042	SM00363	S4 RNA-binding domain
NCgl2045	SM00642	Alpha-amylase domain
NCgl2049	SM00481	DNA polymerase alpha chain like domain
NCgl2060	SM00382	ATPases associated with a variety of cellular activities
NCgl2062	SM00870	NCgl2062
NCgl2066	SM00422	helix_turn_helix, mercury resistance
NCgl2066	SM00567	E-Z type HEAT repeats
NCgl2075	SM00864	Tubulin/FtsZ family, GTPase domain
NCgl2075	SM00865	Tubulin/FtsZ family, C-terminal domain
NCgl2095	SM00220	Serine/Threonine protein kinases, catalytic domain
NCgl2095	SM00740	NCgl2095
NCgl2104	SM00563	Phosphate acyltransferases
NCgl2128	SM00729	Elongator protein 3, MiaB family, Radical SAM
NCgl2133	SM01230	NCgl2133
NCgl2148	SM01230	NCgl2148
NCgl2150	SM00880	NCgl2150
NCgl2150	SM01118	NCgl2150
NCgl2153	SM00955	NCgl2153
NCgl2155	SM00855	Phosphoglycerate mutase family
NCgl2159	SM00226	Low molecular weight phosphatase family
NCgl2168	SM00382	ATPases associated with a variety of cellular activities
NCgl2188	SM00400	zinc finger
NCgl2188	SM00493	NCgl2188
NCgl2188	SM00766	DNA primase DnaG DnaB-binding
NCgl2193	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NCgl2199	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NCgl2206	SM00116	Domain in cystathionine beta-synthase and other proteins.
NCgl2206	SM01091	Transporter associated domain
NCgl2210	SM00271	DnaJ molecular chaperone homology domain
NCgl2212	SM00729	Elongator protein 3, MiaB family, Radical SAM
NCgl2218	SM00382	ATPases associated with a variety of cellular activities
NCgl2221	SM00642	Alpha-amylase domain
NCgl2234	SM00895	NCgl2234
NCgl2241	SM00382	ATPases associated with a variety of cellular activities
NCgl2259	SM00838	Elongation factor G C-terminus
NCgl2263	SM00248	ankyrin repeats
NCgl2266	SM00278	Helix-hairpin-helix DNA-binding motif class 1
NCgl2268	SM00855	Phosphoglycerate mutase family
NCgl2271	SM01110	NCgl2271
NCgl2274	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
NCgl2281	SM00316	Ribosomal protein S1-like RNA-binding domain
NCgl2287	SM00562	NCgl2287
NCgl2304	SM00382	ATPases associated with a variety of cellular activities
NCgl2304	SM00994	ClpX C4-type zinc finger
NCgl2304	SM01086	C-terminal, D2-small domain, of ClpB protein
NCgl2306	SM00882	Coenzyme A transferase
NCgl2307	SM00882	Coenzyme A transferase
NCgl2308	SM00346	helix_turn_helix isocitrate lyase regulation
NCgl2311	SM00421	helix_turn_helix, Lux Regulon
NCgl2316	SM00507	HNH nucleases
NCgl2318	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
NCgl2322	SM00895	NCgl2322
NCgl2324	SM00421	helix_turn_helix, Lux Regulon
NCgl2350	SM00382	ATPases associated with a variety of cellular activities
NCgl2361	SM00382	ATPases associated with a variety of cellular activities
NCgl2368	SM00382	ATPases associated with a variety of cellular activities
NCgl2371	SM00098	Alkaline phosphatase homologues
NCgl2377	SM00382	ATPases associated with a variety of cellular activities
NCgl2380	SM00342	helix_turn_helix, arabinose operon control protein
NCgl2382	SM01001	AIR carboxylase
NCgl2385	SM00822	NCgl2385
NCgl2386	SM00479	NCgl2386
NCgl2400	SM00507	HNH nucleases
NCgl2409	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NCgl2425	SM00347	helix_turn_helix multiple antibiotic resistance protein
NCgl2433	SM00487	DEAD-like helicases superfamily
NCgl2433	SM00491	NCgl2433
NCgl2440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NCgl2440	SM00895	NCgl2440
NCgl2441	SM00529	Helix-turn-helix diphteria tox regulatory element
NCgl2441	SM00899	NCgl2441
NCgl2449	SM00829	Enoylreductase
NCgl2465	SM00382	ATPases associated with a variety of cellular activities
NCgl2472	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
NCgl2472	SM00421	helix_turn_helix, Lux Regulon
NCgl2476	SM00881	CoA binding domain
NCgl2483	SM00382	ATPases associated with a variety of cellular activities
NCgl2489	SM00046	Diacylglycerol kinase catalytic domain (presumed)
NCgl2500	SM01211	NCgl2500
NCgl2509	SM00998	Adenylosuccinate lyase C-terminus
NCgl2511	SM01209	NCgl2511
NCgl2511	SM01210	NCgl2511
NCgl2517	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NCgl2517	SM00387	Histidine kinase-like ATPases
NCgl2517	SM00388	His Kinase A (phosphoacceptor) domain
NCgl2518	SM00448	cheY-homologous receiver domain
NCgl2518	SM00862	Transcriptional regulatory protein, C terminal
NCgl2519	SM00422	helix_turn_helix, mercury resistance
NCgl2520	SM01119	NCgl2520
NCgl2538	SM00354	helix_turn _helix lactose operon repressor
NCgl2540	SM00382	ATPases associated with a variety of cellular activities
NCgl2551	SM00967	RNA 2'-O ribose methyltransferase substrate binding
NCgl2552	SM00840	NCgl2552
NCgl2554	SM00640	Glycosyl hydrolases family 32
NCgl2557	SM01130	NCgl2557
NCgl2561	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NCgl2561	SM00895	NCgl2561
NCgl2564	SM00382	ATPases associated with a variety of cellular activities
NCgl2565	SM00382	ATPases associated with a variety of cellular activities
NCgl2567	SM00344	helix_turn_helix ASNC type
NCgl2571	SM01058	CarD-like/TRCF domain
NCgl2572	SM00448	cheY-homologous receiver domain
NCgl2572	SM00862	Transcriptional regulatory protein, C terminal
NCgl2573	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NCgl2573	SM00387	Histidine kinase-like ATPases
NCgl2573	SM00388	His Kinase A (phosphoacceptor) domain
NCgl2575	SM00382	ATPases associated with a variety of cellular activities
NCgl2579	SM00947	Carbonic anhydrase
NCgl2580	SM00478	endonuclease III
NCgl2580	SM00525	NCgl2580
NCgl2585	SM00382	ATPases associated with a variety of cellular activities
NCgl2585	SM01086	C-terminal, D2-small domain, of ClpB protein
NCgl2586	SM00116	Domain in cystathionine beta-synthase and other proteins.
NCgl2586	SM01240	NCgl2586
NCgl2587	SM00342	helix_turn_helix, arabinose operon control protein
NCgl2600	SM00905	Dihydroneopterin aldolase
NCgl2603	SM00382	ATPases associated with a variety of cellular activities
NCgl2616	SM00450	Rhodanese Homology Domain
NCgl2617	SM00347	helix_turn_helix multiple antibiotic resistance protein
NCgl2618	SM00823	Phosphopantetheine attachment site
NCgl2646	SM00155	Phospholipase D. Active site motifs.
NCgl2651	SM00382	ATPases associated with a variety of cellular activities
NCgl2654	SM00062	Bacterial periplasmic substrate-binding proteins
NCgl2655	SM00220	Serine/Threonine protein kinases, catalytic domain
NCgl2668	SM00421	helix_turn_helix, Lux Regulon
NCgl2668	SM00448	cheY-homologous receiver domain
NCgl2669	SM00788	Adenylosuccinate synthetase
NCgl2678	SM00450	Rhodanese Homology Domain
NCgl2682	SM00382	ATPases associated with a variety of cellular activities
NCgl2682	SM01086	C-terminal, D2-small domain, of ClpB protein
NCgl2684	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NCgl2689	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl2699	SM00422	helix_turn_helix, mercury resistance
NCgl2700	SM00271	DnaJ molecular chaperone homology domain
NCgl2709	SM00829	Enoylreductase
NCgl2727	SM00382	ATPases associated with a variety of cellular activities
NCgl2728	SM00382	ATPases associated with a variety of cellular activities
NCgl2732	SM00382	ATPases associated with a variety of cellular activities
NCgl2737	SM00244	prohibitin homologues
NCgl2750	SM00984	UDP binding domain
NCgl2773	SM00823	Phosphopantetheine attachment site
NCgl2773	SM00824	Thioesterase
NCgl2773	SM00825	Beta-ketoacyl synthase
NCgl2773	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NCgl2775	SM01110	NCgl2775
NCgl2778	SM00507	HNH nucleases
NCgl2782	SM00014	Acid phosphatase homologues
NCgl2785	SM00014	Acid phosphatase homologues
NCgl2789	SM00644	NCgl2789
NCgl2789	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
NCgl2792	SM00563	Phosphate acyltransferases
NCgl2794	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NCgl2794	SM00866	NCgl2794
NCgl2798	SM00855	Phosphoglycerate mutase family
NCgl2814	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NCgl2814	SM00895	NCgl2814
NCgl2819	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl2833	SM00347	helix_turn_helix multiple antibiotic resistance protein
NCgl2834	SM00421	helix_turn_helix, Lux Regulon
NCgl2834	SM00448	cheY-homologous receiver domain
NCgl2835	SM00387	Histidine kinase-like ATPases
NCgl2846	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NCgl2862	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NCgl2862	SM00387	Histidine kinase-like ATPases
NCgl2862	SM00388	His Kinase A (phosphoacceptor) domain
NCgl2863	SM00448	cheY-homologous receiver domain
NCgl2863	SM00862	Transcriptional regulatory protein, C terminal
NCgl2867	SM00829	Enoylreductase
NCgl2878	SM00382	ATPases associated with a variety of cellular activities
NCgl2886	SM00347	helix_turn_helix multiple antibiotic resistance protein
NCgl2890	SM00450	Rhodanese Homology Domain
NCgl2892	SM00382	ATPases associated with a variety of cellular activities
NCgl2898	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
NCgl2898	SM01232	NCgl2898
NCgl2902	SM00829	Enoylreductase
NCgl2904	SM00919	Malic enzyme, NAD binding domain
NCgl2904	SM01274	NCgl2904
NCgl2917	SM00530	Helix-turn-helix XRE-family like proteins 
NCgl2935	SM00382	ATPases associated with a variety of cellular activities
NCgl2941	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NCgl2954	SM00346	helix_turn_helix isocitrate lyase regulation
NCgl2964	SM00487	DEAD-like helicases superfamily
NCgl2964	SM00490	helicase superfamily c-terminal domain
NCgl2971	SM00829	Enoylreductase
NCgl2979	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NCgl2986	SM00646	NCgl2986
NCgl2988	SM00470	ParB-like nuclease domain
