locus-tag class description CIMIT_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CIMIT_RS00005 PF00308 Bacterial dnaA protein CIMIT_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CIMIT_RS00010 PF02767 DNA polymerase III beta subunit, central domain CIMIT_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CIMIT_RS00015 PF02463 RecF/RecN/SMC N terminal domain CIMIT_RS00020 PF05258 Dna[CI] antecedent, DciA CIMIT_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus CIMIT_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIMIT_RS00025 PF01751 Toprim domain CIMIT_RS00025 PF00204 DNA gyrase B CIMIT_RS00055 PF00521 DNA gyrase/topoisomerase IV, subunit A CIMIT_RS00055 PF03989 DNA gyrase C-terminal domain, beta-propeller CIMIT_RS00090 PF01083 Cutinase CIMIT_RS00110 PF00440 Bacterial regulatory proteins, tetR family CIMIT_RS00125 PF02219 Methylenetetrahydrofolate reductase CIMIT_RS00130 PF08267 Cobalamin-independent synthase, N-terminal domain CIMIT_RS00130 PF01717 Cobalamin-independent synthase, Catalytic domain CIMIT_RS00150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CIMIT_RS00165 PF06781 Cell division protein CrgA CIMIT_RS00170 PF03793 PASTA domain CIMIT_RS00170 PF00069 Protein kinase domain CIMIT_RS00175 PF00069 Protein kinase domain CIMIT_RS00180 PF00905 Penicillin binding protein transpeptidase domain CIMIT_RS00185 PF01098 Cell cycle protein CIMIT_RS00195 PF16697 Inner membrane component of T3SS, cytoplasmic domain CIMIT_RS00200 PF00498 FHA domain CIMIT_RS00200 PF12401 Protein of unknown function (DUF2662) CIMIT_RS00200 PF00498 FHA domain CIMIT_RS00200 PF12401 Protein of unknown function (DUF2662) CIMIT_RS00210 PF01126 Heme oxygenase CIMIT_RS00230 PF01032 FecCD transport family CIMIT_RS00235 PF00005 ABC transporter CIMIT_RS00245 PF01494 FAD binding domain CIMIT_RS00250 PF04650 YSIRK type signal peptide CIMIT_RS00250 PF17961 Bacterial Ig domain CIMIT_RS00250 PF00746 LPXTG cell wall anchor motif CIMIT_RS00250 PF17210 SdrD B-like domain CIMIT_RS00260 PF02445 Quinolinate synthetase A protein CIMIT_RS00265 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CIMIT_RS00265 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CIMIT_RS00270 PF00266 Aminotransferase class-V CIMIT_RS00275 PF02016 LD-carboxypeptidase N-terminal domain CIMIT_RS00275 PF17676 LD-carboxypeptidase C-terminal domain CIMIT_RS00280 PF07690 Major Facilitator Superfamily CIMIT_RS00315 PF00175 Oxidoreductase NAD-binding domain CIMIT_RS00315 PF00042 Globin CIMIT_RS00315 PF00970 Oxidoreductase FAD-binding domain CIMIT_RS00325 PF01381 Helix-turn-helix CIMIT_RS00330 PF04960 Glutaminase CIMIT_RS00340 PF00128 Alpha amylase, catalytic domain CIMIT_RS00340 PF02903 Alpha amylase, N-terminal ig-like domain CIMIT_RS00340 PF16657 Maltogenic Amylase, C-terminal domain CIMIT_RS00350 PF07687 Peptidase dimerisation domain CIMIT_RS00350 PF01546 Peptidase family M20/M25/M40 CIMIT_RS00375 PF01048 Phosphorylase superfamily CIMIT_RS00375 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CIMIT_RS00380 PF02146 Sir2 family CIMIT_RS00385 PF00375 Sodium:dicarboxylate symporter family CIMIT_RS00405 PF05145 Transition state regulatory protein AbrB CIMIT_RS00410 PF01925 Sulfite exporter TauE/SafE CIMIT_RS00420 PF13520 Amino acid permease CIMIT_RS00425 PF00270 DEAD/DEAH box helicase CIMIT_RS00425 PF04408 Helicase associated domain (HA2) CIMIT_RS00425 PF08482 ATP-dependent helicase C-terminal CIMIT_RS00425 PF00271 Helicase conserved C-terminal domain CIMIT_RS00440 PF12464 Maltose acetyltransferase CIMIT_RS00440 PF14602 Hexapeptide repeat of succinyl-transferase CIMIT_RS00440 PF00132 Bacterial transferase hexapeptide (six repeats) CIMIT_RS00445 PF01810 LysE type translocator CIMIT_RS00450 PF00106 short chain dehydrogenase CIMIT_RS00455 PF01906 Putative heavy-metal-binding CIMIT_RS00475 PF05649 Peptidase family M13 CIMIT_RS00475 PF01431 Peptidase family M13 CIMIT_RS00485 PF04602 Mycobacterial cell wall arabinan synthesis protein CIMIT_RS00485 PF17689 Arabinosyltransferase concanavalin like domain CIMIT_RS00485 PF14896 EmbC C-terminal domain CIMIT_RS00490 PF12250 Arabinofuranosyltransferase N terminal CIMIT_RS00490 PF12249 Arabinofuranosyltransferase A C terminal CIMIT_RS00495 PF00196 Bacterial regulatory proteins, luxR family CIMIT_RS00495 PF00072 Response regulator receiver domain CIMIT_RS00505 PF00005 ABC transporter CIMIT_RS00515 PF00106 short chain dehydrogenase CIMIT_RS00520 PF04030 D-arabinono-1,4-lactone oxidase CIMIT_RS00520 PF01565 FAD binding domain CIMIT_RS00535 PF04138 GtrA-like protein CIMIT_RS00550 PF00005 ABC transporter CIMIT_RS00555 PF01061 ABC-2 type transporter CIMIT_RS00560 PF00266 Aminotransferase class-V CIMIT_RS00565 PF14765 Polyketide synthase dehydratase CIMIT_RS00565 PF00550 Phosphopantetheine attachment site CIMIT_RS00565 PF08659 KR domain CIMIT_RS00565 PF02801 Beta-ketoacyl synthase, C-terminal domain CIMIT_RS00565 PF00109 Beta-ketoacyl synthase, N-terminal domain CIMIT_RS00565 PF16197 Ketoacyl-synthetase C-terminal extension CIMIT_RS00565 PF09277 Erythronolide synthase, docking CIMIT_RS00565 PF08240 Alcohol dehydrogenase GroES-like domain CIMIT_RS00565 PF00698 Acyl transferase domain CIMIT_RS00565 PF08990 Erythronolide synthase docking CIMIT_RS00575 PF00266 Aminotransferase class-V CIMIT_RS00605 PF04650 YSIRK type signal peptide CIMIT_RS00605 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CIMIT_RS00605 PF17210 SdrD B-like domain CIMIT_RS00605 PF17961 Bacterial Ig domain CIMIT_RS00605 PF00746 LPXTG cell wall anchor motif CIMIT_RS00615 PF02153 Prephenate dehydrogenase CIMIT_RS00625 PF11734 TilS substrate C-terminal domain CIMIT_RS00625 PF14437 MafB19-like deaminase CIMIT_RS00625 PF01171 PP-loop family CIMIT_RS00640 PF03176 MMPL family CIMIT_RS00645 PF01702 Queuine tRNA-ribosyltransferase CIMIT_RS00655 PF12704 MacB-like periplasmic core domain CIMIT_RS00655 PF02687 FtsX-like permease family CIMIT_RS00655 PF00005 ABC transporter CIMIT_RS00660 PF00665 Integrase core domain CIMIT_RS00665 PF13700 Domain of unknown function (DUF4158) CIMIT_RS00665 PF01526 Tn3 transposase DDE domain CIMIT_RS00670 PF13610 DDE domain CIMIT_RS00675 PF13610 DDE domain CIMIT_RS00680 PF00239 Resolvase, N terminal domain CIMIT_RS00680 PF02796 Helix-turn-helix domain of resolvase CIMIT_RS00690 PF01636 Phosphotransferase enzyme family CIMIT_RS00695 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase CIMIT_RS00700 PF07690 Major Facilitator Superfamily CIMIT_RS00710 PF02687 FtsX-like permease family CIMIT_RS00710 PF12704 MacB-like periplasmic core domain CIMIT_RS00710 PF00005 ABC transporter CIMIT_RS00720 PF02592 Putative vitamin uptake transporter CIMIT_RS00725 PF00749 tRNA synthetases class I (E and Q), catalytic domain CIMIT_RS00740 PF12897 Alanine-glyoxylate amino-transferase CIMIT_RS00750 PF12169 DNA polymerase III subunits gamma and tau domain III CIMIT_RS00755 PF02575 YbaB/EbfC DNA-binding family CIMIT_RS00760 PF13662 Toprim domain CIMIT_RS00760 PF02132 RecR protein CIMIT_RS00765 PF07685 CobB/CobQ-like glutamine amidotransferase domain CIMIT_RS00770 PF08245 Mur ligase middle domain CIMIT_RS00785 PF08502 LeuA allosteric (dimerisation) domain CIMIT_RS00785 PF00682 HMGL-like CIMIT_RS00795 PF13840 ACT domain CIMIT_RS00795 PF01842 ACT domain CIMIT_RS00795 PF00696 Amino acid kinase family CIMIT_RS00800 PF01118 Semialdehyde dehydrogenase, NAD binding domain CIMIT_RS00800 PF02774 Semialdehyde dehydrogenase, dimerisation domain CIMIT_RS00820 PF04542 Sigma-70 region 2 CIMIT_RS00820 PF08281 Sigma-70, region 4 CIMIT_RS00825 PF00199 Catalase CIMIT_RS00825 PF06628 Catalase-related immune-responsive CIMIT_RS00830 PF00005 ABC transporter CIMIT_RS00840 PF07730 Histidine kinase CIMIT_RS00865 PF00361 Proton-conducting membrane transporter CIMIT_RS00870 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CIMIT_RS00875 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CIMIT_RS00875 PF13244 Domain of unknown function (DUF4040) CIMIT_RS00875 PF00361 Proton-conducting membrane transporter CIMIT_RS00875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CIMIT_RS00900 PF00905 Penicillin binding protein transpeptidase domain CIMIT_RS00900 PF00912 Transglycosylase CIMIT_RS00905 PF02467 Transcription factor WhiB CIMIT_RS00915 PF00753 Metallo-beta-lactamase superfamily CIMIT_RS00920 PF00027 Cyclic nucleotide-binding domain CIMIT_RS00920 PF13545 Crp-like helix-turn-helix domain CIMIT_RS00925 PF00633 Helix-hairpin-helix motif CIMIT_RS00925 PF00730 HhH-GPD superfamily base excision DNA repair protein CIMIT_RS00925 PF10576 Iron-sulfur binding domain of endonuclease III CIMIT_RS00930 PF08534 Redoxin CIMIT_RS00935 PF00293 NUDIX domain CIMIT_RS00940 PF02674 Colicin V production protein CIMIT_RS00945 PF12697 Alpha/beta hydrolase family CIMIT_RS00970 PF00437 Type II/IV secretion system protein CIMIT_RS01000 PF00270 DEAD/DEAH box helicase CIMIT_RS01000 PF00271 Helicase conserved C-terminal domain CIMIT_RS01000 PF09369 Domain of unknown function (DUF1998) CIMIT_RS01005 PF00313 'Cold-shock' DNA-binding domain CIMIT_RS01015 PF13368 Topoisomerase C-terminal repeat CIMIT_RS01015 PF01751 Toprim domain CIMIT_RS01015 PF01131 DNA topoisomerase CIMIT_RS01020 PF00211 Adenylate and Guanylate cyclase catalytic domain CIMIT_RS01020 PF00672 HAMP domain CIMIT_RS01025 PF09115 DNA polymerase III, delta subunit, C terminal CIMIT_RS01060 PF00501 AMP-binding enzyme CIMIT_RS01060 PF13193 AMP-binding enzyme C-terminal domain CIMIT_RS01080 PF08240 Alcohol dehydrogenase GroES-like domain CIMIT_RS01080 PF00107 Zinc-binding dehydrogenase CIMIT_RS01085 PF00753 Metallo-beta-lactamase superfamily CIMIT_RS01105 PF00535 Glycosyl transferase family 2 CIMIT_RS01110 PF00535 Glycosyl transferase family 2 CIMIT_RS01115 PF00483 Nucleotidyl transferase CIMIT_RS01125 PF04321 RmlD substrate binding domain CIMIT_RS01130 PF16363 GDP-mannose 4,6 dehydratase CIMIT_RS01140 PF00326 Prolyl oligopeptidase family CIMIT_RS01140 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CIMIT_RS01155 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIMIT_RS01155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CIMIT_RS01165 PF02910 Fumarate reductase flavoprotein C-term CIMIT_RS01165 PF00890 FAD binding domain CIMIT_RS01170 PF13085 2Fe-2S iron-sulfur cluster binding domain CIMIT_RS01170 PF13183 4Fe-4S dicluster domain CIMIT_RS01180 PF04286 Protein of unknown function (DUF445) CIMIT_RS01215 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CIMIT_RS01215 PF01565 FAD binding domain CIMIT_RS01220 PF13193 AMP-binding enzyme C-terminal domain CIMIT_RS01220 PF00501 AMP-binding enzyme CIMIT_RS01225 PF00501 AMP-binding enzyme CIMIT_RS01225 PF13193 AMP-binding enzyme C-terminal domain CIMIT_RS01230 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CIMIT_RS01235 PF13439 Glycosyltransferase Family 4 CIMIT_RS01235 PF00534 Glycosyl transferases group 1 CIMIT_RS01245 PF00300 Histidine phosphatase superfamily (branch 1) CIMIT_RS01250 PF00512 His Kinase A (phospho-acceptor) domain CIMIT_RS01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIMIT_RS01255 PF00486 Transcriptional regulatory protein, C terminal CIMIT_RS01255 PF00072 Response regulator receiver domain CIMIT_RS01265 PF02541 Ppx/GppA phosphatase family CIMIT_RS01275 PF14748 Pyrroline-5-carboxylate reductase dimerisation CIMIT_RS01275 PF03807 NADP oxidoreductase coenzyme F420-dependent CIMIT_RS01280 PF12728 Helix-turn-helix domain CIMIT_RS01290 PF05768 Glutaredoxin-like domain (DUF836) CIMIT_RS01295 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CIMIT_RS01295 PF01488 Shikimate / quinate 5-dehydrogenase CIMIT_RS01295 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CIMIT_RS01300 PF03900 Porphobilinogen deaminase, C-terminal domain CIMIT_RS01300 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CIMIT_RS01305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CIMIT_RS01305 PF14824 Sirohaem biosynthesis protein central CIMIT_RS01305 PF10414 Sirohaem synthase dimerisation region CIMIT_RS01310 PF00490 Delta-aminolevulinic acid dehydratase CIMIT_RS01325 PF00403 Heavy-metal-associated domain CIMIT_RS01330 PF01208 Uroporphyrinogen decarboxylase (URO-D) CIMIT_RS01335 PF01593 Flavin containing amine oxidoreductase CIMIT_RS01340 PF07690 Major Facilitator Superfamily CIMIT_RS01355 PF00202 Aminotransferase class-III CIMIT_RS01360 PF00300 Histidine phosphatase superfamily (branch 1) CIMIT_RS01370 PF02683 Cytochrome C biogenesis protein transmembrane region CIMIT_RS01375 PF05140 ResB-like family CIMIT_RS01380 PF01578 Cytochrome C assembly protein CIMIT_RS01385 PF01370 NAD dependent epimerase/dehydratase family CIMIT_RS01420 PF01040 UbiA prenyltransferase family CIMIT_RS01435 PF00245 Alkaline phosphatase CIMIT_RS01445 PF13193 AMP-binding enzyme C-terminal domain CIMIT_RS01445 PF00501 AMP-binding enzyme CIMIT_RS01460 PF00072 Response regulator receiver domain CIMIT_RS01460 PF00196 Bacterial regulatory proteins, luxR family CIMIT_RS01465 PF00005 ABC transporter CIMIT_RS01490 PF00378 Enoyl-CoA hydratase/isomerase CIMIT_RS01500 PF02421 Ferrous iron transport protein B CIMIT_RS01500 PF07670 Nucleoside recognition CIMIT_RS01500 PF07664 Ferrous iron transport protein B C terminus CIMIT_RS01510 PF13378 Enolase C-terminal domain-like CIMIT_RS01510 PF18374 Enolase N-terminal domain-like CIMIT_RS01515 PF00939 Sodium:sulfate symporter transmembrane region CIMIT_RS01525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CIMIT_RS01535 PF00534 Glycosyl transferases group 1 CIMIT_RS01535 PF13439 Glycosyltransferase Family 4 CIMIT_RS01540 PF01325 Iron dependent repressor, N-terminal DNA binding domain CIMIT_RS01540 PF02742 Iron dependent repressor, metal binding and dimerisation domain CIMIT_RS01540 PF18357 Diphteria toxin repressor SH3 domain CIMIT_RS01545 PF00950 ABC 3 transport family CIMIT_RS01550 PF00005 ABC transporter CIMIT_RS01555 PF01297 Zinc-uptake complex component A periplasmic CIMIT_RS01560 PF01209 ubiE/COQ5 methyltransferase family CIMIT_RS01565 PF01494 FAD binding domain CIMIT_RS01570 PF00348 Polyprenyl synthetase CIMIT_RS01595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CIMIT_RS01600 PF02357 Transcription termination factor nusG CIMIT_RS01605 PF03946 Ribosomal protein L11, N-terminal domain CIMIT_RS01605 PF00298 Ribosomal protein L11, RNA binding domain CIMIT_RS01610 PF00687 Ribosomal protein L1p/L10e family CIMIT_RS01620 PF01297 Zinc-uptake complex component A periplasmic CIMIT_RS01630 PF00005 ABC transporter CIMIT_RS01635 PF00950 ABC 3 transport family CIMIT_RS01645 PF00466 Ribosomal protein L10 CIMIT_RS01650 PF16320 Ribosomal protein L7/L12 dimerisation domain CIMIT_RS01650 PF00542 Ribosomal protein L7/L12 C-terminal domain CIMIT_RS01655 PF17480 AlphaC C-terminal CIMIT_RS01655 PF04650 YSIRK type signal peptide CIMIT_RS01655 PF08829 Alpha C protein N terminal CIMIT_RS01655 PF00746 LPXTG cell wall anchor motif CIMIT_RS01665 PF10385 RNA polymerase beta subunit external 1 domain CIMIT_RS01665 PF04560 RNA polymerase Rpb2, domain 7 CIMIT_RS01665 PF04565 RNA polymerase Rpb2, domain 3 CIMIT_RS01665 PF00562 RNA polymerase Rpb2, domain 6 CIMIT_RS01665 PF04563 RNA polymerase beta subunit CIMIT_RS01665 PF04561 RNA polymerase Rpb2, domain 2 CIMIT_RS01670 PF04997 RNA polymerase Rpb1, domain 1 CIMIT_RS01670 PF00623 RNA polymerase Rpb1, domain 2 CIMIT_RS01670 PF04998 RNA polymerase Rpb1, domain 5 CIMIT_RS01670 PF04983 RNA polymerase Rpb1, domain 3 CIMIT_RS01680 PF00164 Ribosomal protein S12/S23 CIMIT_RS01685 PF00177 Ribosomal protein S7p/S5e CIMIT_RS01690 PF00679 Elongation factor G C-terminus CIMIT_RS01690 PF14492 Elongation Factor G, domain II CIMIT_RS01690 PF03144 Elongation factor Tu domain 2 CIMIT_RS01690 PF00009 Elongation factor Tu GTP binding domain CIMIT_RS01690 PF03764 Elongation factor G, domain IV CIMIT_RS01695 PF00009 Elongation factor Tu GTP binding domain CIMIT_RS01695 PF03143 Elongation factor Tu C-terminal domain CIMIT_RS01695 PF03144 Elongation factor Tu domain 2 CIMIT_RS01730 PF03780 Asp23 family, cell envelope-related function CIMIT_RS01735 PF00338 Ribosomal protein S10p/S20e CIMIT_RS01740 PF00297 Ribosomal protein L3 CIMIT_RS01745 PF00573 Ribosomal protein L4/L1 family CIMIT_RS01750 PF00276 Ribosomal protein L23 CIMIT_RS01755 PF03947 Ribosomal Proteins L2, C-terminal domain CIMIT_RS01755 PF00181 Ribosomal Proteins L2, RNA binding domain CIMIT_RS01760 PF00203 Ribosomal protein S19 CIMIT_RS01765 PF00237 Ribosomal protein L22p/L17e CIMIT_RS01770 PF07650 KH domain CIMIT_RS01770 PF00189 Ribosomal protein S3, C-terminal domain CIMIT_RS01775 PF00252 Ribosomal protein L16p/L10e CIMIT_RS01780 PF00831 Ribosomal L29 protein CIMIT_RS01785 PF00366 Ribosomal protein S17 CIMIT_RS01805 PF00916 Sulfate permease family CIMIT_RS01805 PF01740 STAS domain CIMIT_RS01810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CIMIT_RS01810 PF04324 BFD-like [2Fe-2S] binding domain CIMIT_RS01810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CIMIT_RS01810 PF13806 Rieske-like [2Fe-2S] domain CIMIT_RS01810 PF18267 Rubredoxin NAD+ reductase C-terminal domain CIMIT_RS01810 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIMIT_RS01815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CIMIT_RS01815 PF18267 Rubredoxin NAD+ reductase C-terminal domain CIMIT_RS01815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CIMIT_RS01815 PF13806 Rieske-like [2Fe-2S] domain CIMIT_RS01815 PF04324 BFD-like [2Fe-2S] binding domain CIMIT_RS01815 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIMIT_RS01820 PF01380 SIS domain CIMIT_RS01830 PF08244 Glycosyl hydrolases family 32 C terminal CIMIT_RS01830 PF00251 Glycosyl hydrolases family 32 N-terminal domain CIMIT_RS01845 PF00238 Ribosomal protein L14p/L23e CIMIT_RS01850 PF00467 KOW motif CIMIT_RS01850 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CIMIT_RS01855 PF00281 Ribosomal protein L5 CIMIT_RS01855 PF00673 ribosomal L5P family C-terminus CIMIT_RS01860 PF01926 50S ribosome-binding GTPase CIMIT_RS01880 PF02634 FdhD/NarQ family CIMIT_RS01895 PF07687 Peptidase dimerisation domain CIMIT_RS01895 PF01546 Peptidase family M20/M25/M40 CIMIT_RS01900 PF00410 Ribosomal protein S8 CIMIT_RS01905 PF00347 Ribosomal protein L6 CIMIT_RS01910 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CIMIT_RS01915 PF00333 Ribosomal protein S5, N-terminal domain CIMIT_RS01915 PF03719 Ribosomal protein S5, C-terminal domain CIMIT_RS01920 PF00327 Ribosomal protein L30p/L7e CIMIT_RS01925 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CIMIT_RS01935 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS01940 PF09383 NIL domain CIMIT_RS01940 PF00005 ABC transporter CIMIT_RS01950 PF00344 SecY translocase CIMIT_RS01960 PF00557 Metallopeptidase family M24 CIMIT_RS01970 PF01176 Translation initiation factor 1A / IF-1 CIMIT_RS01975 PF00416 Ribosomal protein S13/S18 CIMIT_RS01980 PF00411 Ribosomal protein S11 CIMIT_RS01985 PF01479 S4 domain CIMIT_RS01985 PF00163 Ribosomal protein S4/S9 N-terminal domain CIMIT_RS01990 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CIMIT_RS01990 PF01000 RNA polymerase Rpb3/RpoA insert domain CIMIT_RS01990 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CIMIT_RS01995 PF01196 Ribosomal protein L17 CIMIT_RS02000 PF01416 tRNA pseudouridine synthase CIMIT_RS02010 PF05108 Type VII secretion system ESX-1, transport TM domain B CIMIT_RS02015 PF00082 Subtilase family CIMIT_RS02025 PF01580 FtsK/SpoIIIE family CIMIT_RS02050 PF02796 Helix-turn-helix domain of resolvase CIMIT_RS02050 PF00239 Resolvase, N terminal domain CIMIT_RS02070 PF00572 Ribosomal protein L13 CIMIT_RS02075 PF00380 Ribosomal protein S9/S16 CIMIT_RS02080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CIMIT_RS02080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CIMIT_RS02080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CIMIT_RS02080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CIMIT_RS02110 PF01168 Alanine racemase, N-terminal domain CIMIT_RS02110 PF00842 Alanine racemase, C-terminal domain CIMIT_RS02115 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CIMIT_RS02125 PF00814 Glycoprotease family CIMIT_RS02130 PF00583 Acetyltransferase (GNAT) family CIMIT_RS02135 PF00814 Glycoprotease family CIMIT_RS02145 PF00166 Chaperonin 10 Kd subunit CIMIT_RS02150 PF00118 TCP-1/cpn60 chaperonin family CIMIT_RS02155 PF02467 Transcription factor WhiB CIMIT_RS02160 PF04542 Sigma-70 region 2 CIMIT_RS02160 PF08281 Sigma-70, region 4 CIMIT_RS02170 PF17252 Family of unknown function (DUF5319) CIMIT_RS02175 PF00571 CBS domain CIMIT_RS02175 PF00478 IMP dehydrogenase / GMP reductase domain CIMIT_RS02180 PF00478 IMP dehydrogenase / GMP reductase domain CIMIT_RS02195 PF00117 Glutamine amidotransferase class-I CIMIT_RS02195 PF00958 GMP synthase C terminal domain CIMIT_RS02195 PF02540 NAD synthase CIMIT_RS02210 PF00196 Bacterial regulatory proteins, luxR family CIMIT_RS02210 PF00072 Response regulator receiver domain CIMIT_RS02240 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS02245 PF09383 NIL domain CIMIT_RS02245 PF00005 ABC transporter CIMIT_RS02250 PF03180 NLPA lipoprotein CIMIT_RS02255 PF03180 NLPA lipoprotein CIMIT_RS02265 PF04978 Protein of unknown function (DUF664) CIMIT_RS02270 PF02811 PHP domain CIMIT_RS02270 PF14579 Helix-hairpin-helix motif CIMIT_RS02270 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CIMIT_RS02270 PF07733 Bacterial DNA polymerase III alpha NTPase domain CIMIT_RS02295 PF00588 SpoU rRNA Methylase family CIMIT_RS02300 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CIMIT_RS02300 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CIMIT_RS02315 PF00005 ABC transporter CIMIT_RS02315 PF08402 TOBE domain CIMIT_RS02325 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS02335 PF00561 alpha/beta hydrolase fold CIMIT_RS02340 PF01053 Cys/Met metabolism PLP-dependent enzyme CIMIT_RS02345 PF00311 Phosphoenolpyruvate carboxylase CIMIT_RS02355 PF04055 Radical SAM superfamily CIMIT_RS02355 PF06968 Biotin and Thiamin Synthesis associated domain CIMIT_RS02365 PF00005 ABC transporter CIMIT_RS02370 PF07729 FCD domain CIMIT_RS02370 PF00392 Bacterial regulatory proteins, gntR family CIMIT_RS02380 PF03971 Monomeric isocitrate dehydrogenase CIMIT_RS02390 PF03458 UPF0126 domain CIMIT_RS02395 PF06968 Biotin and Thiamin Synthesis associated domain CIMIT_RS02395 PF04055 Radical SAM superfamily CIMIT_RS02405 PF00579 tRNA synthetases class I (W and Y) CIMIT_RS02410 PF03631 Virulence factor BrkB CIMIT_RS02415 PF00768 D-alanyl-D-alanine carboxypeptidase CIMIT_RS02420 PF03458 UPF0126 domain CIMIT_RS02445 PF01546 Peptidase family M20/M25/M40 CIMIT_RS02445 PF04107 Glutamate-cysteine ligase family 2(GCS2) CIMIT_RS02450 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIMIT_RS02450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CIMIT_RS02455 PF06114 IrrE N-terminal-like domain CIMIT_RS02455 PF09856 Predicted transcriptional regulator (DUF2083) CIMIT_RS02455 PF01381 Helix-turn-helix CIMIT_RS02460 PF03972 MmgE/PrpD family CIMIT_RS02470 PF00285 Citrate synthase, C-terminal domain CIMIT_RS02475 PF02436 Conserved carboxylase domain CIMIT_RS02475 PF02785 Biotin carboxylase C-terminal domain CIMIT_RS02475 PF00289 Biotin carboxylase, N-terminal domain CIMIT_RS02475 PF00364 Biotin-requiring enzyme CIMIT_RS02475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIMIT_RS02475 PF00682 HMGL-like CIMIT_RS02490 PF00583 Acetyltransferase (GNAT) family CIMIT_RS02500 PF00364 Biotin-requiring enzyme CIMIT_RS02500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIMIT_RS02500 PF00289 Biotin carboxylase, N-terminal domain CIMIT_RS02500 PF02785 Biotin carboxylase C-terminal domain CIMIT_RS02505 PF00581 Rhodanese-like domain CIMIT_RS02510 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CIMIT_RS02510 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CIMIT_RS02530 PF02545 Maf-like protein CIMIT_RS02540 PF01039 Carboxyl transferase domain CIMIT_RS02545 PF12705 PD-(D/E)XK nuclease superfamily CIMIT_RS02545 PF00580 UvrD/REP helicase N-terminal domain CIMIT_RS02545 PF13361 UvrD-like helicase C-terminal domain CIMIT_RS02555 PF00580 UvrD/REP helicase N-terminal domain CIMIT_RS02555 PF12705 PD-(D/E)XK nuclease superfamily CIMIT_RS02555 PF13361 UvrD-like helicase C-terminal domain CIMIT_RS02565 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIMIT_RS02580 PF00550 Phosphopantetheine attachment site CIMIT_RS02580 PF00698 Acyl transferase domain CIMIT_RS02580 PF14765 Polyketide synthase dehydratase CIMIT_RS02580 PF16197 Ketoacyl-synthetase C-terminal extension CIMIT_RS02580 PF00109 Beta-ketoacyl synthase, N-terminal domain CIMIT_RS02580 PF08240 Alcohol dehydrogenase GroES-like domain CIMIT_RS02580 PF02801 Beta-ketoacyl synthase, C-terminal domain CIMIT_RS02580 PF08659 KR domain CIMIT_RS02585 PF01039 Carboxyl transferase domain CIMIT_RS02590 PF01648 4'-phosphopantetheinyl transferase superfamily CIMIT_RS02595 PF08279 HTH domain CIMIT_RS02595 PF02237 Biotin protein ligase C terminal domain CIMIT_RS02595 PF03099 Biotin/lipoate A/B protein ligase family CIMIT_RS02605 PF03306 Alpha-acetolactate decarboxylase CIMIT_RS02610 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CIMIT_RS02610 PF02222 ATP-grasp domain CIMIT_RS02615 PF00731 AIR carboxylase CIMIT_RS02635 PF00581 Rhodanese-like domain CIMIT_RS02635 PF00899 ThiF family CIMIT_RS02640 PF05690 Thiazole biosynthesis protein ThiG CIMIT_RS02650 PF01266 FAD dependent oxidoreductase CIMIT_RS02655 PF02581 Thiamine monophosphate synthase CIMIT_RS02660 PF02581 Thiamine monophosphate synthase CIMIT_RS02660 PF03070 TENA/THI-4/PQQC family CIMIT_RS02660 PF08543 Phosphomethylpyrimidine kinase CIMIT_RS02680 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS02685 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS02690 PF01547 Bacterial extracellular solute-binding protein CIMIT_RS02700 PF03816 Cell envelope-related transcriptional attenuator domain CIMIT_RS02700 PF13399 LytR cell envelope-related transcriptional attenuator CIMIT_RS02710 PF00483 Nucleotidyl transferase CIMIT_RS02715 PF02467 Transcription factor WhiB CIMIT_RS02730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CIMIT_RS02730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CIMIT_RS02730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CIMIT_RS02730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CIMIT_RS02740 PF01238 Phosphomannose isomerase type I CIMIT_RS02760 PF02223 Thymidylate kinase CIMIT_RS02765 PF00486 Transcriptional regulatory protein, C terminal CIMIT_RS02765 PF00072 Response regulator receiver domain CIMIT_RS02770 PF00672 HAMP domain CIMIT_RS02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIMIT_RS02770 PF00512 His Kinase A (phospho-acceptor) domain CIMIT_RS02775 PF10647 Lipoprotein LpqB beta-propeller domain CIMIT_RS02775 PF10646 Sporulation and spore germination CIMIT_RS02785 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CIMIT_RS02785 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CIMIT_RS02790 PF07517 SecA DEAD-like domain CIMIT_RS02790 PF01043 SecA preprotein cross-linking domain CIMIT_RS02790 PF07516 SecA Wing and Scaffold domain CIMIT_RS02805 PF03193 RsgA GTPase CIMIT_RS02810 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CIMIT_RS02815 PF02586 SOS response associated peptidase (SRAP) CIMIT_RS02820 PF04073 Aminoacyl-tRNA editing domain CIMIT_RS02825 PF04542 Sigma-70 region 2 CIMIT_RS02825 PF08281 Sigma-70, region 4 CIMIT_RS02830 PF13490 Putative zinc-finger CIMIT_RS02840 PF02467 Transcription factor WhiB CIMIT_RS02855 PF00271 Helicase conserved C-terminal domain CIMIT_RS02855 PF00270 DEAD/DEAH box helicase CIMIT_RS02875 PF12705 PD-(D/E)XK nuclease superfamily CIMIT_RS02875 PF13361 UvrD-like helicase C-terminal domain CIMIT_RS02875 PF00580 UvrD/REP helicase N-terminal domain CIMIT_RS02880 PF13361 UvrD-like helicase C-terminal domain CIMIT_RS02880 PF00580 UvrD/REP helicase N-terminal domain CIMIT_RS02890 PF09297 NADH pyrophosphatase zinc ribbon domain CIMIT_RS02890 PF00293 NUDIX domain CIMIT_RS02895 PF00580 UvrD/REP helicase N-terminal domain CIMIT_RS02895 PF13361 UvrD-like helicase C-terminal domain CIMIT_RS02895 PF00570 HRDC domain CIMIT_RS02925 PF03699 Uncharacterised protein family (UPF0182) CIMIT_RS02935 PF07690 Major Facilitator Superfamily CIMIT_RS02950 PF00664 ABC transporter transmembrane region CIMIT_RS02950 PF00005 ABC transporter CIMIT_RS02950 PF08021 Siderophore-interacting FAD-binding domain CIMIT_RS02950 PF04954 Siderophore-interacting protein CIMIT_RS02955 PF00005 ABC transporter CIMIT_RS02965 PF00158 Sigma-54 interaction domain CIMIT_RS02965 PF00072 Response regulator receiver domain CIMIT_RS02965 PF02954 Bacterial regulatory protein, Fis family CIMIT_RS02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIMIT_RS02970 PF00512 His Kinase A (phospho-acceptor) domain CIMIT_RS02970 PF00989 PAS fold CIMIT_RS02975 PF00939 Sodium:sulfate symporter transmembrane region CIMIT_RS02980 PF01964 Radical SAM ThiC family CIMIT_RS02980 PF13667 ThiC-associated domain CIMIT_RS02990 PF01545 Cation efflux family CIMIT_RS02990 PF16916 Dimerisation domain of Zinc Transporter CIMIT_RS02995 PF02028 BCCT, betaine/carnitine/choline family transporter CIMIT_RS03010 PF13673 Acetyltransferase (GNAT) domain CIMIT_RS03020 PF01546 Peptidase family M20/M25/M40 CIMIT_RS03020 PF07687 Peptidase dimerisation domain CIMIT_RS03025 PF00089 Trypsin CIMIT_RS03025 PF02983 Alpha-lytic protease prodomain CIMIT_RS03030 PF00459 Inositol monophosphatase family CIMIT_RS03035 PF00459 Inositol monophosphatase family CIMIT_RS03040 PF00893 Small Multidrug Resistance protein CIMIT_RS03045 PF00472 RF-1 domain CIMIT_RS03045 PF03462 PCRF domain CIMIT_RS03050 PF00083 Sugar (and other) transporter CIMIT_RS03055 PF02436 Conserved carboxylase domain CIMIT_RS03055 PF00682 HMGL-like CIMIT_RS03055 PF00364 Biotin-requiring enzyme CIMIT_RS03060 PF00364 Biotin-requiring enzyme CIMIT_RS03065 PF00289 Biotin carboxylase, N-terminal domain CIMIT_RS03065 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIMIT_RS03065 PF02785 Biotin carboxylase C-terminal domain CIMIT_RS03080 PF00175 Oxidoreductase NAD-binding domain CIMIT_RS03080 PF00111 2Fe-2S iron-sulfur cluster binding domain CIMIT_RS03095 PF00171 Aldehyde dehydrogenase family CIMIT_RS03100 PF00005 ABC transporter CIMIT_RS03105 PF18075 FtsX extracellular domain CIMIT_RS03105 PF02687 FtsX-like permease family CIMIT_RS03110 PF01668 SmpB protein CIMIT_RS03125 PF01032 FecCD transport family CIMIT_RS03130 PF01032 FecCD transport family CIMIT_RS03135 PF00005 ABC transporter CIMIT_RS03180 PF06737 Transglycosylase-like domain CIMIT_RS03180 PF11574 Protein of unknown function (DUF3235) CIMIT_RS03185 PF00313 'Cold-shock' DNA-binding domain CIMIT_RS03200 PF11228 Protein of unknown function (DUF3027) CIMIT_RS03210 PF00860 Permease family CIMIT_RS03215 PF00588 SpoU rRNA Methylase family CIMIT_RS03225 PF11268 Protein of unknown function (DUF3071) CIMIT_RS03230 PF00266 Aminotransferase class-V CIMIT_RS03235 PF00285 Citrate synthase, C-terminal domain CIMIT_RS03240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIMIT_RS03245 PF00248 Aldo/keto reductase family CIMIT_RS03255 PF00474 Sodium:solute symporter family CIMIT_RS03260 PF03006 Haemolysin-III related CIMIT_RS03265 PF08924 Domain of unknown function (DUF1906) CIMIT_RS03290 PF00462 Glutaredoxin CIMIT_RS03295 PF00186 Dihydrofolate reductase CIMIT_RS03300 PF00303 Thymidylate synthase CIMIT_RS03305 PF00459 Inositol monophosphatase family CIMIT_RS03310 PF00271 Helicase conserved C-terminal domain CIMIT_RS03310 PF08494 DEAD/H associated CIMIT_RS03310 PF00270 DEAD/DEAH box helicase CIMIT_RS03315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CIMIT_RS03315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CIMIT_RS03320 PF09335 SNARE associated Golgi protein CIMIT_RS03330 PF00342 Phosphoglucose isomerase CIMIT_RS03335 PF03992 Antibiotic biosynthesis monooxygenase CIMIT_RS03340 PF01817 Chorismate mutase type II CIMIT_RS03345 PF00580 UvrD/REP helicase N-terminal domain CIMIT_RS03345 PF13361 UvrD-like helicase C-terminal domain CIMIT_RS03350 PF01551 Peptidase family M23 CIMIT_RS03365 PF00551 Formyl transferase CIMIT_RS03370 PF01808 AICARFT/IMPCHase bienzyme CIMIT_RS03370 PF02142 MGS-like domain CIMIT_RS03395 PF08360 QacR-like protein, C-terminal region CIMIT_RS03395 PF00440 Bacterial regulatory proteins, tetR family CIMIT_RS03400 PF01084 Ribosomal protein S18 CIMIT_RS03405 PF00253 Ribosomal protein S14p/S29e CIMIT_RS03410 PF00471 Ribosomal protein L33 CIMIT_RS03415 PF00830 Ribosomal L28 family CIMIT_RS03425 PF00196 Bacterial regulatory proteins, luxR family CIMIT_RS03425 PF00072 Response regulator receiver domain CIMIT_RS03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIMIT_RS03430 PF07730 Histidine kinase CIMIT_RS03430 PF00672 HAMP domain CIMIT_RS03440 PF01197 Ribosomal protein L31 CIMIT_RS03445 PF01783 Ribosomal L32p protein family CIMIT_RS03450 PF00072 Response regulator receiver domain CIMIT_RS03450 PF00486 Transcriptional regulatory protein, C terminal CIMIT_RS03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIMIT_RS03455 PF00512 His Kinase A (phospho-acceptor) domain CIMIT_RS03455 PF00672 HAMP domain CIMIT_RS03460 PF13180 PDZ domain CIMIT_RS03465 PF01967 MoaC family CIMIT_RS03465 PF00994 Probable molybdopterin binding domain CIMIT_RS03475 PF01741 Large-conductance mechanosensitive channel, MscL CIMIT_RS03485 PF01812 5-formyltetrahydrofolate cyclo-ligase family CIMIT_RS03490 PF00483 Nucleotidyl transferase CIMIT_RS03495 PF03454 MoeA C-terminal region (domain IV) CIMIT_RS03495 PF03453 MoeA N-terminal region (domain I and II) CIMIT_RS03495 PF00994 Probable molybdopterin binding domain CIMIT_RS03515 PF00004 ATPase family associated with various cellular activities (AAA) CIMIT_RS03530 PF03352 Methyladenine glycosylase CIMIT_RS03535 PF07681 DoxX CIMIT_RS03545 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase CIMIT_RS03545 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CIMIT_RS03550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CIMIT_RS03555 PF02028 BCCT, betaine/carnitine/choline family transporter CIMIT_RS03560 PF09334 tRNA synthetases class I (M) CIMIT_RS03560 PF08264 Anticodon-binding domain of tRNA CIMIT_RS03565 PF00561 alpha/beta hydrolase fold CIMIT_RS03575 PF01026 TatD related DNase CIMIT_RS03580 PF03990 G5-linked-Ubiquitin-like domain CIMIT_RS03580 PF06737 Transglycosylase-like domain CIMIT_RS03580 PF07501 G5 domain CIMIT_RS03585 PF00398 Ribosomal RNA adenine dimethylase CIMIT_RS03590 PF08544 GHMP kinases C terminal CIMIT_RS03590 PF00288 GHMP kinases N terminal domain CIMIT_RS03595 PF16326 ABC transporter C-terminal domain CIMIT_RS03595 PF12848 ABC transporter CIMIT_RS03595 PF00005 ABC transporter CIMIT_RS03615 PF03976 Polyphosphate kinase 2 (PPK2) CIMIT_RS03620 PF02245 Methylpurine-DNA glycosylase (MPG) CIMIT_RS03630 PF00378 Enoyl-CoA hydratase/isomerase CIMIT_RS03635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CIMIT_RS03635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CIMIT_RS03645 PF13439 Glycosyltransferase Family 4 CIMIT_RS03645 PF00534 Glycosyl transferases group 1 CIMIT_RS03655 PF04650 YSIRK type signal peptide CIMIT_RS03655 PF00746 LPXTG cell wall anchor motif CIMIT_RS03655 PF17210 SdrD B-like domain CIMIT_RS03655 PF17961 Bacterial Ig domain CIMIT_RS03680 PF00939 Sodium:sulfate symporter transmembrane region CIMIT_RS03715 PF00009 Elongation factor Tu GTP binding domain CIMIT_RS03715 PF16658 Class II release factor RF3, C-terminal domain CIMIT_RS03725 PF02386 Cation transport protein CIMIT_RS03730 PF02080 TrkA-C domain CIMIT_RS03730 PF02254 TrkA-N domain CIMIT_RS03735 PF03358 NADPH-dependent FMN reductase CIMIT_RS03740 PF01195 Peptidyl-tRNA hydrolase CIMIT_RS03745 PF03060 Nitronate monooxygenase CIMIT_RS03750 PF01557 Fumarylacetoacetate (FAA) hydrolase family CIMIT_RS03755 PF01195 Peptidyl-tRNA hydrolase CIMIT_RS03760 PF14693 Ribosomal protein TL5, C-terminal domain CIMIT_RS03760 PF01386 Ribosomal L25p family CIMIT_RS03765 PF00171 Aldehyde dehydrogenase family CIMIT_RS03770 PF00155 Aminotransferase class I and II CIMIT_RS03775 PF00324 Amino acid permease CIMIT_RS03780 PF14572 Phosphoribosyl synthetase-associated domain CIMIT_RS03780 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CIMIT_RS03785 PF00132 Bacterial transferase hexapeptide (six repeats) CIMIT_RS03785 PF12804 MobA-like NTP transferase domain CIMIT_RS03795 PF07732 Multicopper oxidase CIMIT_RS03795 PF07731 Multicopper oxidase CIMIT_RS03795 PF00394 Multicopper oxidase CIMIT_RS03800 PF01757 Acyltransferase family CIMIT_RS03815 PF02559 CarD-like/TRCF domain CIMIT_RS03815 PF00270 DEAD/DEAH box helicase CIMIT_RS03815 PF17757 UvrB interaction domain CIMIT_RS03815 PF03461 TRCF domain CIMIT_RS03815 PF00271 Helicase conserved C-terminal domain CIMIT_RS03825 PF09015 NgoMIV restriction enzyme CIMIT_RS03830 PF00145 C-5 cytosine-specific DNA methylase CIMIT_RS03845 PF01593 Flavin containing amine oxidoreductase CIMIT_RS03870 PF01272 Transcription elongation factor, GreA/GreB, C-term CIMIT_RS03870 PF03449 Transcription elongation factor, N-terminal CIMIT_RS03880 PF02585 GlcNAc-PI de-N-acetylase CIMIT_RS03890 PF01255 Putative undecaprenyl diphosphate synthase CIMIT_RS03895 PF00485 Phosphoribulokinase / Uridine kinase family CIMIT_RS03900 PF00464 Serine hydroxymethyltransferase CIMIT_RS03925 PF07690 Major Facilitator Superfamily CIMIT_RS03935 PF07690 Major Facilitator Superfamily CIMIT_RS03950 PF10415 Fumarase C C-terminus CIMIT_RS03950 PF00206 Lyase CIMIT_RS03955 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CIMIT_RS03965 PF02609 Exonuclease VII small subunit CIMIT_RS03970 PF13742 OB-fold nucleic acid binding domain CIMIT_RS03970 PF02601 Exonuclease VII, large subunit CIMIT_RS03975 PF02401 LytB protein CIMIT_RS03985 PF02646 RmuC family CIMIT_RS03990 PF01594 AI-2E family transporter CIMIT_RS03995 PF06071 Protein of unknown function (DUF933) CIMIT_RS03995 PF01926 50S ribosome-binding GTPase CIMIT_RS04010 PF12704 MacB-like periplasmic core domain CIMIT_RS04010 PF02687 FtsX-like permease family CIMIT_RS04010 PF00005 ABC transporter CIMIT_RS04020 PF00239 Resolvase, N terminal domain CIMIT_RS04020 PF02796 Helix-turn-helix domain of resolvase CIMIT_RS04035 PF00403 Heavy-metal-associated domain CIMIT_RS04045 PF01022 Bacterial regulatory protein, arsR family CIMIT_RS04065 PF12728 Helix-turn-helix domain CIMIT_RS04085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIMIT_RS04085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CIMIT_RS04090 PF13411 MerR HTH family regulatory protein CIMIT_RS04100 PF00005 ABC transporter CIMIT_RS04105 PF01032 FecCD transport family CIMIT_RS04120 PF00472 RF-1 domain CIMIT_RS04120 PF03462 PCRF domain CIMIT_RS04155 PF01022 Bacterial regulatory protein, arsR family CIMIT_RS04170 PF03462 PCRF domain CIMIT_RS04170 PF00472 RF-1 domain CIMIT_RS04190 PF02687 FtsX-like permease family CIMIT_RS04190 PF12704 MacB-like periplasmic core domain CIMIT_RS04190 PF00005 ABC transporter CIMIT_RS04225 PF09383 NIL domain CIMIT_RS04225 PF00005 ABC transporter CIMIT_RS04230 PF02653 Branched-chain amino acid transport system / permease component CIMIT_RS04245 PF07690 Major Facilitator Superfamily CIMIT_RS04255 PF13411 MerR HTH family regulatory protein CIMIT_RS04265 PF13810 Domain of unknown function (DUF4185) CIMIT_RS04270 PF10518 TAT (twin-arginine translocation) pathway signal sequence CIMIT_RS04270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CIMIT_RS04270 PF01568 Molydopterin dinucleotide binding domain CIMIT_RS04270 PF00384 Molybdopterin oxidoreductase CIMIT_RS04275 PF01568 Molydopterin dinucleotide binding domain CIMIT_RS04275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CIMIT_RS04275 PF00384 Molybdopterin oxidoreductase CIMIT_RS04280 PF09163 Formate dehydrogenase N, transmembrane CIMIT_RS04280 PF13247 4Fe-4S dicluster domain CIMIT_RS04290 PF00586 AIR synthase related protein, N-terminal domain CIMIT_RS04290 PF02769 AIR synthase related protein, C-terminal domain CIMIT_RS04300 PF12390 Selenocysteine synthase N terminal CIMIT_RS04300 PF03841 L-seryl-tRNA selenium transferase CIMIT_RS04305 PF03144 Elongation factor Tu domain 2 CIMIT_RS04305 PF00009 Elongation factor Tu GTP binding domain CIMIT_RS04305 PF09105 Elongation factor SelB, winged helix CIMIT_RS04305 PF09106 Elongation factor SelB, winged helix CIMIT_RS04305 PF09107 Elongation factor SelB, winged helix CIMIT_RS04320 PF05661 Protein of unknown function (DUF808) CIMIT_RS04325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CIMIT_RS04330 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS04335 PF12911 N-terminal TM domain of oligopeptide transport permease C CIMIT_RS04335 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS04340 PF00005 ABC transporter CIMIT_RS04340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CIMIT_RS04345 PF09819 ABC-type cobalt transport system, permease component CIMIT_RS04350 PF00005 ABC transporter CIMIT_RS04360 PF02569 Pantoate-beta-alanine ligase CIMIT_RS04360 PF02224 Cytidylate kinase CIMIT_RS04375 PF14492 Elongation Factor G, domain II CIMIT_RS04375 PF03144 Elongation factor Tu domain 2 CIMIT_RS04375 PF00679 Elongation factor G C-terminus CIMIT_RS04375 PF00009 Elongation factor Tu GTP binding domain CIMIT_RS04385 PF02585 GlcNAc-PI de-N-acetylase CIMIT_RS04395 PF00037 4Fe-4S binding domain CIMIT_RS04400 PF00155 Aminotransferase class I and II CIMIT_RS04415 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CIMIT_RS04415 PF14602 Hexapeptide repeat of succinyl-transferase CIMIT_RS04420 PF00324 Amino acid permease CIMIT_RS04425 PF00324 Amino acid permease CIMIT_RS04430 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CIMIT_RS04430 PF14602 Hexapeptide repeat of succinyl-transferase CIMIT_RS04435 PF07687 Peptidase dimerisation domain CIMIT_RS04435 PF01546 Peptidase family M20/M25/M40 CIMIT_RS04440 PF03641 Possible lysine decarboxylase CIMIT_RS04445 PF00809 Pterin binding enzyme CIMIT_RS04450 PF00535 Glycosyl transferase family 2 CIMIT_RS04460 PF13649 Methyltransferase domain CIMIT_RS04470 PF13439 Glycosyltransferase Family 4 CIMIT_RS04470 PF00534 Glycosyl transferases group 1 CIMIT_RS04475 PF00483 Nucleotidyl transferase CIMIT_RS04485 PF04542 Sigma-70 region 2 CIMIT_RS04485 PF08281 Sigma-70, region 4 CIMIT_RS04500 PF10609 NUBPL iron-transfer P-loop NTPase CIMIT_RS04500 PF01883 Iron-sulfur cluster assembly protein CIMIT_RS04515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CIMIT_RS04515 PF16078 2-oxoglutarate dehydrogenase N-terminus CIMIT_RS04515 PF00676 Dehydrogenase E1 component CIMIT_RS04515 PF02779 Transketolase, pyrimidine binding domain CIMIT_RS04515 PF16870 2-oxoglutarate dehydrogenase C-terminal CIMIT_RS04520 PF00005 ABC transporter CIMIT_RS04520 PF00664 ABC transporter transmembrane region CIMIT_RS04530 PF00135 Carboxylesterase family CIMIT_RS04545 PF07690 Major Facilitator Superfamily CIMIT_RS04550 PF01156 Inosine-uridine preferring nucleoside hydrolase CIMIT_RS04565 PF00005 ABC transporter CIMIT_RS04575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CIMIT_RS04575 PF00056 lactate/malate dehydrogenase, NAD binding domain CIMIT_RS04580 PF00324 Amino acid permease CIMIT_RS04585 PF00089 Trypsin CIMIT_RS04595 PF00072 Response regulator receiver domain CIMIT_RS04595 PF00486 Transcriptional regulatory protein, C terminal CIMIT_RS04600 PF00672 HAMP domain CIMIT_RS04600 PF00512 His Kinase A (phospho-acceptor) domain CIMIT_RS04600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIMIT_RS04605 PF03600 Citrate transporter CIMIT_RS04610 PF03880 DbpA RNA binding domain CIMIT_RS04610 PF00270 DEAD/DEAH box helicase CIMIT_RS04610 PF00271 Helicase conserved C-terminal domain CIMIT_RS04635 PF00474 Sodium:solute symporter family CIMIT_RS04640 PF00176 SNF2 family N-terminal domain CIMIT_RS04640 PF00271 Helicase conserved C-terminal domain CIMIT_RS04640 PF12419 SNF2 Helicase protein CIMIT_RS04650 PF00149 Calcineurin-like phosphoesterase CIMIT_RS04655 PF13175 AAA ATPase domain CIMIT_RS04685 PF01022 Bacterial regulatory protein, arsR family CIMIT_RS04690 PF01758 Sodium Bile acid symporter family CIMIT_RS04695 PF01451 Low molecular weight phosphotyrosine protein phosphatase CIMIT_RS04725 PF00665 Integrase core domain CIMIT_RS04730 PF01695 IstB-like ATP binding protein CIMIT_RS04760 PF02589 LUD domain CIMIT_RS04765 PF13183 4Fe-4S dicluster domain CIMIT_RS04765 PF02589 LUD domain CIMIT_RS04765 PF11870 Domain of unknown function (DUF3390) CIMIT_RS04770 PF02754 Cysteine-rich domain CIMIT_RS04775 PF02652 L-lactate permease CIMIT_RS04780 PF05746 DALR anticodon binding domain CIMIT_RS04780 PF00750 tRNA synthetases class I (R) CIMIT_RS04780 PF03485 Arginyl tRNA synthetase N terminal domain CIMIT_RS04785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CIMIT_RS04785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CIMIT_RS04790 PF03447 Homoserine dehydrogenase, NAD binding domain CIMIT_RS04790 PF00742 Homoserine dehydrogenase CIMIT_RS04790 PF01842 ACT domain CIMIT_RS04795 PF00288 GHMP kinases N terminal domain CIMIT_RS04800 PF00899 ThiF family CIMIT_RS04800 PF00581 Rhodanese-like domain CIMIT_RS04810 PF00994 Probable molybdopterin binding domain CIMIT_RS04815 PF00994 Probable molybdopterin binding domain CIMIT_RS04815 PF03454 MoeA C-terminal region (domain IV) CIMIT_RS04815 PF03453 MoeA N-terminal region (domain I and II) CIMIT_RS04825 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS04835 PF02665 Nitrate reductase gamma subunit CIMIT_RS04835 PF02613 Nitrate reductase delta subunit CIMIT_RS04835 PF00384 Molybdopterin oxidoreductase CIMIT_RS04855 PF01967 MoaC family CIMIT_RS04860 PF00994 Probable molybdopterin binding domain CIMIT_RS04860 PF03454 MoeA C-terminal region (domain IV) CIMIT_RS04860 PF03453 MoeA N-terminal region (domain I and II) CIMIT_RS04865 PF04055 Radical SAM superfamily CIMIT_RS04865 PF06463 Molybdenum Cofactor Synthesis C CIMIT_RS04870 PF00501 AMP-binding enzyme CIMIT_RS04870 PF13193 AMP-binding enzyme C-terminal domain CIMIT_RS04875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIMIT_RS04875 PF07498 Rho termination factor, N-terminal domain CIMIT_RS04875 PF07497 Rho termination factor, RNA-binding domain CIMIT_RS04880 PF00472 RF-1 domain CIMIT_RS04880 PF03462 PCRF domain CIMIT_RS04885 PF05175 Methyltransferase small domain CIMIT_RS04885 PF17827 PrmC N-terminal domain CIMIT_RS04890 PF01300 Telomere recombination CIMIT_RS04895 PF00953 Glycosyl transferase family 4 CIMIT_RS04905 PF00119 ATP synthase A chain CIMIT_RS04910 PF00137 ATP synthase subunit C CIMIT_RS04915 PF00430 ATP synthase B/B' CF(0) CIMIT_RS04920 PF00213 ATP synthase delta (OSCP) subunit CIMIT_RS04925 PF00306 ATP synthase alpha/beta chain, C terminal domain CIMIT_RS04925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIMIT_RS04925 PF02874 ATP synthase alpha/beta family, beta-barrel domain CIMIT_RS04930 PF00231 ATP synthase CIMIT_RS04935 PF02874 ATP synthase alpha/beta family, beta-barrel domain CIMIT_RS04935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIMIT_RS04940 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CIMIT_RS04950 PF01939 Endonuclease NucS CIMIT_RS04960 PF01910 Thiamine-binding protein CIMIT_RS04965 PF00085 Thioredoxin CIMIT_RS04970 PF02806 Alpha amylase, C-terminal all-beta domain CIMIT_RS04970 PF00128 Alpha amylase, catalytic domain CIMIT_RS04970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CIMIT_RS04975 PF11896 Domain of unknown function (DUF3416) CIMIT_RS04980 PF00005 ABC transporter CIMIT_RS04990 PF18096 THUMP domain-like CIMIT_RS04995 PF00266 Aminotransferase class-V CIMIT_RS05020 PF00005 ABC transporter CIMIT_RS05025 PF00196 Bacterial regulatory proteins, luxR family CIMIT_RS05025 PF00072 Response regulator receiver domain CIMIT_RS05030 PF07730 Histidine kinase CIMIT_RS05040 PF08000 Bacterial PH domain CIMIT_RS05060 PF03120 NAD-dependent DNA ligase OB-fold domain CIMIT_RS05060 PF01653 NAD-dependent DNA ligase adenylation domain CIMIT_RS05060 PF00533 BRCA1 C Terminus (BRCT) domain CIMIT_RS05060 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CIMIT_RS05060 PF12826 Helix-hairpin-helix motif CIMIT_RS05075 PF00144 Beta-lactamase CIMIT_RS05090 PF02686 Glu-tRNAGln amidotransferase C subunit CIMIT_RS05095 PF01425 Amidase CIMIT_RS05100 PF07690 Major Facilitator Superfamily CIMIT_RS05105 PF00365 Phosphofructokinase CIMIT_RS05115 PF02637 GatB domain CIMIT_RS05115 PF02934 GatB/GatE catalytic domain CIMIT_RS05130 PF13409 Glutathione S-transferase, N-terminal domain CIMIT_RS05140 PF00920 Dehydratase family CIMIT_RS05155 PF00924 Mechanosensitive ion channel CIMIT_RS05160 PF00205 Thiamine pyrophosphate enzyme, central domain CIMIT_RS05160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CIMIT_RS05160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CIMIT_RS05165 PF10369 Small subunit of acetolactate synthase CIMIT_RS05165 PF01842 ACT domain CIMIT_RS05170 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CIMIT_RS05170 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CIMIT_RS05185 PF01545 Cation efflux family CIMIT_RS05200 PF01842 ACT domain CIMIT_RS05200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CIMIT_RS05200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CIMIT_RS05205 PF00180 Isocitrate/isopropylmalate dehydrogenase CIMIT_RS05225 PF01557 Fumarylacetoacetate (FAA) hydrolase family CIMIT_RS05230 PF00425 chorismate binding enzyme CIMIT_RS05240 PF00749 tRNA synthetases class I (E and Q), catalytic domain CIMIT_RS05255 PF13173 AAA domain CIMIT_RS05255 PF13635 Domain of unknown function (DUF4143) CIMIT_RS05290 PF09423 PhoD-like phosphatase CIMIT_RS05290 PF16655 PhoD-like phosphatase, N-terminal domain CIMIT_RS05295 PF01614 Bacterial transcriptional regulator CIMIT_RS05295 PF09339 IclR helix-turn-helix domain CIMIT_RS05300 PF00330 Aconitase family (aconitate hydratase) CIMIT_RS05305 PF00694 Aconitase C-terminal domain CIMIT_RS05320 PF00293 NUDIX domain CIMIT_RS05320 PF00300 Histidine phosphatase superfamily (branch 1) CIMIT_RS05325 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CIMIT_RS05325 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CIMIT_RS05330 PF07478 D-ala D-ala ligase C-terminus CIMIT_RS05330 PF01820 D-ala D-ala ligase N-terminus CIMIT_RS05340 PF02769 AIR synthase related protein, C-terminal domain CIMIT_RS05340 PF00586 AIR synthase related protein, N-terminal domain CIMIT_RS05345 PF03167 Uracil DNA glycosylase superfamily CIMIT_RS05350 PF02734 DAK2 domain CIMIT_RS05350 PF13684 Dihydroxyacetone kinase family CIMIT_RS05355 PF00270 DEAD/DEAH box helicase CIMIT_RS05355 PF17191 RecG wedge domain CIMIT_RS05355 PF00271 Helicase conserved C-terminal domain CIMIT_RS05365 PF01467 Cytidylyltransferase-like CIMIT_RS05375 PF00005 ABC transporter CIMIT_RS05380 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS05385 PF00497 Bacterial extracellular solute-binding proteins, family 3 CIMIT_RS05400 PF07690 Major Facilitator Superfamily CIMIT_RS05500 PF00005 ABC transporter CIMIT_RS05665 PF00476 DNA polymerase family A CIMIT_RS05665 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CIMIT_RS05665 PF01367 5'-3' exonuclease, C-terminal SAM fold CIMIT_RS05670 PF08241 Methyltransferase domain CIMIT_RS05675 PF00575 S1 RNA binding domain CIMIT_RS05680 PF01121 Dephospho-CoA kinase CIMIT_RS05695 PF00005 ABC transporter CIMIT_RS05695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CIMIT_RS05700 PF12911 N-terminal TM domain of oligopeptide transport permease C CIMIT_RS05700 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS05705 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS05710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CIMIT_RS05715 PF00440 Bacterial regulatory proteins, tetR family CIMIT_RS05720 PF04851 Type III restriction enzyme, res subunit CIMIT_RS05720 PF02151 UvrB/uvrC motif CIMIT_RS05720 PF12344 Ultra-violet resistance protein B CIMIT_RS05720 PF17757 UvrB interaction domain CIMIT_RS05720 PF00271 Helicase conserved C-terminal domain CIMIT_RS05725 PF00582 Universal stress protein family CIMIT_RS05730 PF00582 Universal stress protein family CIMIT_RS05735 PF13538 UvrD-like helicase C-terminal domain CIMIT_RS05745 PF00753 Metallo-beta-lactamase superfamily CIMIT_RS05745 PF16123 Hydroxyacylglutathione hydrolase C-terminus CIMIT_RS05750 PF17755 UvrA DNA-binding domain CIMIT_RS05750 PF17760 UvrA interaction domain CIMIT_RS05750 PF00005 ABC transporter CIMIT_RS05755 PF05198 Translation initiation factor IF-3, N-terminal domain CIMIT_RS05755 PF00707 Translation initiation factor IF-3, C-terminal domain CIMIT_RS05760 PF01632 Ribosomal protein L35 CIMIT_RS05765 PF00453 Ribosomal protein L20 CIMIT_RS05775 PF00588 SpoU rRNA Methylase family CIMIT_RS05775 PF08032 RNA 2'-O ribose methyltransferase substrate binding CIMIT_RS05780 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CIMIT_RS05780 PF01409 tRNA synthetases class II core domain (F) CIMIT_RS05785 PF03483 B3/4 domain CIMIT_RS05785 PF03484 tRNA synthetase B5 domain CIMIT_RS05785 PF03147 Ferredoxin-fold anticodon binding domain CIMIT_RS05785 PF01588 Putative tRNA binding domain CIMIT_RS05785 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CIMIT_RS05790 PF02774 Semialdehyde dehydrogenase, dimerisation domain CIMIT_RS05790 PF01118 Semialdehyde dehydrogenase, NAD binding domain CIMIT_RS05795 PF01960 ArgJ family CIMIT_RS05800 PF00696 Amino acid kinase family CIMIT_RS05805 PF00202 Aminotransferase class-III CIMIT_RS05810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CIMIT_RS05810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CIMIT_RS05815 PF01316 Arginine repressor, DNA binding domain CIMIT_RS05815 PF02863 Arginine repressor, C-terminal domain CIMIT_RS05820 PF00764 Arginosuccinate synthase CIMIT_RS05825 PF00206 Lyase CIMIT_RS05825 PF14698 Argininosuccinate lyase C-terminal CIMIT_RS05845 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CIMIT_RS05845 PF03966 Trm112p-like protein CIMIT_RS05850 PF00579 tRNA synthetases class I (W and Y) CIMIT_RS05875 PF18407 GCN5-related N-acetyltransferase like domain CIMIT_RS05875 PF13344 Haloacid dehalogenase-like hydrolase CIMIT_RS05880 PF01728 FtsJ-like methyltransferase CIMIT_RS05880 PF01479 S4 domain CIMIT_RS05885 PF01513 ATP-NAD kinase CIMIT_RS05890 PF02463 RecF/RecN/SMC N terminal domain CIMIT_RS05900 PF11382 Copper transport outer membrane protein, MctB CIMIT_RS05905 PF00293 NUDIX domain CIMIT_RS05910 PF00589 Phage integrase family CIMIT_RS05910 PF02899 Phage integrase, N-terminal SAM-like domain CIMIT_RS05920 PF13614 AAA domain CIMIT_RS05925 PF02616 Segregation and condensation protein ScpA CIMIT_RS05930 PF04079 Segregation and condensation complex subunit ScpB CIMIT_RS05935 PF01479 S4 domain CIMIT_RS05935 PF00849 RNA pseudouridylate synthase CIMIT_RS05940 PF02224 Cytidylate kinase CIMIT_RS05945 PF01926 50S ribosome-binding GTPase CIMIT_RS05945 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CIMIT_RS05950 PF08241 Methyltransferase domain CIMIT_RS05960 PF00781 Diacylglycerol kinase catalytic domain CIMIT_RS06000 PF02254 TrkA-N domain CIMIT_RS06000 PF00999 Sodium/hydrogen exchanger family CIMIT_RS06010 PF02810 SEC-C motif CIMIT_RS06020 PF07516 SecA Wing and Scaffold domain CIMIT_RS06020 PF01043 SecA preprotein cross-linking domain CIMIT_RS06020 PF07517 SecA DEAD-like domain CIMIT_RS06025 PF00498 FHA domain CIMIT_RS06030 PF00376 MerR family regulatory protein CIMIT_RS06035 PF13411 MerR HTH family regulatory protein CIMIT_RS06050 PF00571 CBS domain CIMIT_RS06050 PF01595 Cyclin M transmembrane N-terminal domain CIMIT_RS06055 PF00571 CBS domain CIMIT_RS06055 PF03471 Transporter associated domain CIMIT_RS06055 PF01595 Cyclin M transmembrane N-terminal domain CIMIT_RS06060 PF00271 Helicase conserved C-terminal domain CIMIT_RS06060 PF00270 DEAD/DEAH box helicase CIMIT_RS06070 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CIMIT_RS06070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CIMIT_RS06075 PF03061 Thioesterase superfamily CIMIT_RS06080 PF01544 CorA-like Mg2+ transporter protein CIMIT_RS06085 PF04055 Radical SAM superfamily CIMIT_RS06090 PF02901 Pyruvate formate lyase-like CIMIT_RS06090 PF01228 Glycine radical CIMIT_RS06095 PF01228 Glycine radical CIMIT_RS06095 PF02901 Pyruvate formate lyase-like CIMIT_RS06100 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIMIT_RS06110 PF04264 YceI-like domain CIMIT_RS06120 PF13397 RNA polymerase-binding protein CIMIT_RS06125 PF00535 Glycosyl transferase family 2 CIMIT_RS06130 PF00535 Glycosyl transferase family 2 CIMIT_RS06130 PF00795 Carbon-nitrogen hydrolase CIMIT_RS06145 PF00106 short chain dehydrogenase CIMIT_RS06150 PF00557 Metallopeptidase family M24 CIMIT_RS06150 PF01321 Creatinase/Prolidase N-terminal domain CIMIT_RS06160 PF00271 Helicase conserved C-terminal domain CIMIT_RS06160 PF00270 DEAD/DEAH box helicase CIMIT_RS06160 PF08148 DSHCT (NUC185) domain CIMIT_RS06165 PF00902 Sec-independent protein translocase protein (TatC) CIMIT_RS06170 PF02416 mttA/Hcf106 family CIMIT_RS06185 PF03136 Pup-ligase protein CIMIT_RS06190 PF05639 Pup-like protein CIMIT_RS06195 PF03136 Pup-ligase protein CIMIT_RS06200 PF00854 POT family CIMIT_RS06205 PF00291 Pyridoxal-phosphate dependent enzyme CIMIT_RS06230 PF01680 SOR/SNZ family CIMIT_RS06235 PF00392 Bacterial regulatory proteins, gntR family CIMIT_RS06240 PF01758 Sodium Bile acid symporter family CIMIT_RS06245 PF16450 Proteasomal ATPase OB C-terminal domain CIMIT_RS06245 PF17758 Proteasomal ATPase OB N-terminal domain CIMIT_RS06245 PF00004 ATPase family associated with various cellular activities (AAA) CIMIT_RS06250 PF08704 tRNA methyltransferase complex GCD14 subunit CIMIT_RS06255 PF02127 Aminopeptidase I zinc metalloprotease (M18) CIMIT_RS06265 PF01268 Formate--tetrahydrofolate ligase CIMIT_RS06270 PF03605 Anaerobic c4-dicarboxylate membrane transporter CIMIT_RS06275 PF10415 Fumarase C C-terminus CIMIT_RS06275 PF00206 Lyase CIMIT_RS06280 PF08029 HisG, C-terminal domain CIMIT_RS06280 PF01634 ATP phosphoribosyltransferase CIMIT_RS06285 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CIMIT_RS06290 PF13419 Haloacid dehalogenase-like hydrolase CIMIT_RS06300 PF01406 tRNA synthetases class I (C) catalytic domain CIMIT_RS06305 PF02673 Bacitracin resistance protein BacA CIMIT_RS06315 PF01180 Dihydroorotate dehydrogenase CIMIT_RS06325 PF01161 Phosphatidylethanolamine-binding protein CIMIT_RS06335 PF09335 SNARE associated Golgi protein CIMIT_RS06345 PF01145 SPFH domain / Band 7 family CIMIT_RS06365 PF00762 Ferrochelatase CIMIT_RS06370 PF00877 NlpC/P60 family CIMIT_RS06380 PF00694 Aconitase C-terminal domain CIMIT_RS06380 PF00330 Aconitase family (aconitate hydratase) CIMIT_RS06385 PF00440 Bacterial regulatory proteins, tetR family CIMIT_RS06390 PF02540 NAD synthase CIMIT_RS06390 PF00958 GMP synthase C terminal domain CIMIT_RS06390 PF00117 Glutamine amidotransferase class-I CIMIT_RS06405 PF05167 Uncharacterised ACR (DUF711) CIMIT_RS06430 PF12848 ABC transporter CIMIT_RS06430 PF16326 ABC transporter C-terminal domain CIMIT_RS06430 PF00005 ABC transporter CIMIT_RS06435 PF01883 Iron-sulfur cluster assembly protein CIMIT_RS06440 PF01592 NifU-like N terminal domain CIMIT_RS06445 PF00266 Aminotransferase class-V CIMIT_RS06450 PF00005 ABC transporter CIMIT_RS06455 PF01458 Uncharacterized protein family (UPF0051) CIMIT_RS06460 PF01458 Uncharacterized protein family (UPF0051) CIMIT_RS06475 PF13732 Domain of unknown function (DUF4162) CIMIT_RS06475 PF00005 ABC transporter CIMIT_RS06485 PF02628 Cytochrome oxidase assembly protein CIMIT_RS06495 PF01040 UbiA prenyltransferase family CIMIT_RS06500 PF00456 Transketolase, thiamine diphosphate binding domain CIMIT_RS06500 PF02780 Transketolase, C-terminal domain CIMIT_RS06500 PF02779 Transketolase, pyrimidine binding domain CIMIT_RS06505 PF00923 Transaldolase/Fructose-6-phosphate aldolase CIMIT_RS06510 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CIMIT_RS06510 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CIMIT_RS06520 PF03840 Preprotein translocase SecG subunit CIMIT_RS06525 PF00121 Triosephosphate isomerase CIMIT_RS06530 PF00162 Phosphoglycerate kinase CIMIT_RS06535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CIMIT_RS06535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CIMIT_RS06540 PF10298 WhiA N-terminal LAGLIDADG-like domain CIMIT_RS06540 PF02650 WhiA C-terminal HTH domain CIMIT_RS06540 PF14527 WhiA LAGLIDADG-like domain CIMIT_RS06545 PF01933 Uncharacterised protein family UPF0052 CIMIT_RS06550 PF03668 P-loop ATPase protein family CIMIT_RS06555 PF08459 UvrC Helix-hairpin-helix N-terminal CIMIT_RS06555 PF02151 UvrB/uvrC motif CIMIT_RS06555 PF01541 GIY-YIG catalytic domain CIMIT_RS06560 PF10756 Bacterial PH domain CIMIT_RS06565 PF00885 6,7-dimethyl-8-ribityllumazine synthase CIMIT_RS06570 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CIMIT_RS06570 PF00925 GTP cyclohydrolase II CIMIT_RS06575 PF00677 Lumazine binding domain CIMIT_RS06580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CIMIT_RS06580 PF01872 RibD C-terminal domain CIMIT_RS06585 PF00834 Ribulose-phosphate 3 epimerase family CIMIT_RS06590 PF01029 NusB family CIMIT_RS06590 PF01189 16S rRNA methyltransferase RsmB/F CIMIT_RS06595 PF02911 Formyl transferase, C-terminal domain CIMIT_RS06595 PF00551 Formyl transferase CIMIT_RS06600 PF01327 Polypeptide deformylase CIMIT_RS06605 PF17764 3′ DNA-binding domain (3′BD) CIMIT_RS06610 PF02772 S-adenosylmethionine synthetase, central domain CIMIT_RS06610 PF00438 S-adenosylmethionine synthetase, N-terminal domain CIMIT_RS06610 PF02773 S-adenosylmethionine synthetase, C-terminal domain CIMIT_RS06620 PF04127 DNA / pantothenate metabolism flavoprotein CIMIT_RS06620 PF02441 Flavoprotein CIMIT_RS06625 PF01192 RNA polymerase Rpb6 CIMIT_RS06630 PF00625 Guanylate kinase CIMIT_RS06640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CIMIT_RS06645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIMIT_RS06645 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CIMIT_RS06645 PF02142 MGS-like domain CIMIT_RS06650 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CIMIT_RS06650 PF00117 Glutamine amidotransferase class-I CIMIT_RS06655 PF01979 Amidohydrolase family CIMIT_RS06660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CIMIT_RS06660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CIMIT_RS06665 PF00156 Phosphoribosyl transferase domain CIMIT_RS06680 PF03976 Polyphosphate kinase 2 (PPK2) CIMIT_RS06685 PF01029 NusB family CIMIT_RS06690 PF09285 Elongation factor P, C-terminal CIMIT_RS06690 PF08207 Elongation factor P (EF-P) KOW-like domain CIMIT_RS06690 PF01132 Elongation factor P (EF-P) OB domain CIMIT_RS06695 PF00557 Metallopeptidase family M24 CIMIT_RS06695 PF01321 Creatinase/Prolidase N-terminal domain CIMIT_RS06700 PF01220 Dehydroquinase class II CIMIT_RS06705 PF01761 3-dehydroquinate synthase CIMIT_RS06710 PF01202 Shikimate kinase CIMIT_RS06715 PF01264 Chorismate synthase CIMIT_RS06725 PF08501 Shikimate dehydrogenase substrate binding domain CIMIT_RS06725 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CIMIT_RS06725 PF01488 Shikimate / quinate 5-dehydrogenase CIMIT_RS06735 PF03652 Holliday junction resolvase CIMIT_RS06740 PF02272 DHHA1 domain CIMIT_RS06740 PF01411 tRNA synthetases class II (A) CIMIT_RS06740 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CIMIT_RS06745 PF12002 MgsA AAA+ ATPase C terminal CIMIT_RS06745 PF16193 AAA C-terminal domain CIMIT_RS06745 PF00004 ATPase family associated with various cellular activities (AAA) CIMIT_RS06755 PF02938 GAD domain CIMIT_RS06755 PF00152 tRNA synthetases class II (D, K and N) CIMIT_RS06755 PF01336 OB-fold nucleic acid binding domain CIMIT_RS06760 PF04228 Putative neutral zinc metallopeptidase CIMIT_RS06775 PF03358 NADPH-dependent FMN reductase CIMIT_RS06780 PF03315 Serine dehydratase beta chain CIMIT_RS06780 PF03313 Serine dehydratase alpha chain CIMIT_RS06785 PF13393 Histidyl-tRNA synthetase CIMIT_RS06785 PF03129 Anticodon binding domain CIMIT_RS06790 PF00753 Metallo-beta-lactamase superfamily CIMIT_RS06795 PF08534 Redoxin CIMIT_RS06800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CIMIT_RS06810 PF02872 5'-nucleotidase, C-terminal domain CIMIT_RS06810 PF00149 Calcineurin-like phosphoesterase CIMIT_RS06815 PF13291 ACT domain CIMIT_RS06815 PF02824 TGS domain CIMIT_RS06815 PF04607 Region found in RelA / SpoT proteins CIMIT_RS06820 PF00156 Phosphoribosyl transferase domain CIMIT_RS06830 PF07549 SecD/SecF GG Motif CIMIT_RS06830 PF02355 Protein export membrane protein CIMIT_RS06835 PF02355 Protein export membrane protein CIMIT_RS06835 PF07549 SecD/SecF GG Motif CIMIT_RS06845 PF17864 RuvB AAA lid domain CIMIT_RS06845 PF05491 RuvB C-terminal winged helix domain CIMIT_RS06845 PF05496 Holliday junction DNA helicase RuvB P-loop domain CIMIT_RS06850 PF01330 RuvA N terminal domain CIMIT_RS06850 PF07499 RuvA, C-terminal domain CIMIT_RS06855 PF02075 Crossover junction endodeoxyribonuclease RuvC CIMIT_RS06860 PF01709 Transcriptional regulator CIMIT_RS06875 PF13439 Glycosyltransferase Family 4 CIMIT_RS06880 PF03279 Bacterial lipid A biosynthesis acyltransferase CIMIT_RS06885 PF01066 CDP-alcohol phosphatidyltransferase CIMIT_RS06890 PF01230 HIT domain CIMIT_RS06895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIMIT_RS06895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CIMIT_RS06895 PF03129 Anticodon binding domain CIMIT_RS06900 PF04261 Dyp-type peroxidase family CIMIT_RS06900 PF10518 TAT (twin-arginine translocation) pathway signal sequence CIMIT_RS06960 PF09594 Glycosyltransferase family 87 CIMIT_RS06965 PF01641 SelR domain CIMIT_RS06970 PF06778 Chlorite dismutase CIMIT_RS06985 PF02780 Transketolase, C-terminal domain CIMIT_RS06985 PF02779 Transketolase, pyrimidine binding domain CIMIT_RS06985 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CIMIT_RS06990 PF05958 tRNA (Uracil-5-)-methyltransferase CIMIT_RS06990 PF01938 TRAM domain CIMIT_RS07000 PF00692 dUTPase CIMIT_RS07010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CIMIT_RS07015 PF03611 PTS system sugar-specific permease component CIMIT_RS07025 PF00459 Inositol monophosphatase family CIMIT_RS07030 PF00480 ROK family CIMIT_RS07035 PF04539 Sigma-70 region 3 CIMIT_RS07035 PF04542 Sigma-70 region 2 CIMIT_RS07035 PF00140 Sigma-70 factor, region 1.2 CIMIT_RS07035 PF04545 Sigma-70, region 4 CIMIT_RS07040 PF04851 Type III restriction enzyme, res subunit CIMIT_RS07055 PF17827 PrmC N-terminal domain CIMIT_RS07055 PF05175 Methyltransferase small domain CIMIT_RS07060 PF02580 D-Tyr-tRNA(Tyr) deacylase CIMIT_RS07065 PF04542 Sigma-70 region 2 CIMIT_RS07065 PF04539 Sigma-70 region 3 CIMIT_RS07065 PF04545 Sigma-70, region 4 CIMIT_RS07065 PF00140 Sigma-70 factor, region 1.2 CIMIT_RS07070 PF18357 Diphteria toxin repressor SH3 domain CIMIT_RS07070 PF01325 Iron dependent repressor, N-terminal DNA binding domain CIMIT_RS07070 PF02742 Iron dependent repressor, metal binding and dimerisation domain CIMIT_RS07075 PF01370 NAD dependent epimerase/dehydratase family CIMIT_RS07090 PF00270 DEAD/DEAH box helicase CIMIT_RS07090 PF08148 DSHCT (NUC185) domain CIMIT_RS07090 PF00271 Helicase conserved C-terminal domain CIMIT_RS07095 PF01266 FAD dependent oxidoreductase CIMIT_RS07100 PF00171 Aldehyde dehydrogenase family CIMIT_RS07110 PF02627 Carboxymuconolactone decarboxylase family CIMIT_RS07115 PF00578 AhpC/TSA family CIMIT_RS07120 PF03466 LysR substrate binding domain CIMIT_RS07120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIMIT_RS07125 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CIMIT_RS07125 PF11898 Domain of unknown function (DUF3418) CIMIT_RS07125 PF00270 DEAD/DEAH box helicase CIMIT_RS07125 PF04408 Helicase associated domain (HA2) CIMIT_RS07125 PF00271 Helicase conserved C-terminal domain CIMIT_RS07130 PF03477 ATP cone domain CIMIT_RS07140 PF00717 Peptidase S24-like CIMIT_RS07140 PF01726 LexA DNA binding domain CIMIT_RS07145 PF08220 DeoR-like helix-turn-helix domain CIMIT_RS07145 PF00455 DeoR C terminal sensor domain CIMIT_RS07150 PF00294 pfkB family carbohydrate kinase CIMIT_RS07155 PF02378 Phosphotransferase system, EIIC CIMIT_RS07155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CIMIT_RS07160 PF00381 PTS HPr component phosphorylation site CIMIT_RS07165 PF00860 Permease family CIMIT_RS07170 PF13167 GTP-binding GTPase N-terminal CIMIT_RS07170 PF16360 GTP-binding GTPase Middle Region CIMIT_RS07170 PF01926 50S ribosome-binding GTPase CIMIT_RS07185 PF01678 Diaminopimelate epimerase CIMIT_RS07200 PF03993 Domain of Unknown Function (DUF349) CIMIT_RS07215 PF04055 Radical SAM superfamily CIMIT_RS07215 PF00919 Uncharacterized protein family UPF0004 CIMIT_RS07220 PF00005 ABC transporter CIMIT_RS07225 PF00497 Bacterial extracellular solute-binding proteins, family 3 CIMIT_RS07230 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS07235 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS07240 PF02631 RecX family CIMIT_RS07245 PF00154 recA bacterial DNA recombination protein CIMIT_RS07255 PF02632 BioY family CIMIT_RS07260 PF00005 ABC transporter CIMIT_RS07270 PF04012 PspA/IM30 family CIMIT_RS07280 PF00994 Probable molybdopterin binding domain CIMIT_RS07280 PF18146 Damage-inducible protein CinA KH domain CIMIT_RS07280 PF02464 Competence-damaged protein CIMIT_RS07285 PF01066 CDP-alcohol phosphatidyltransferase CIMIT_RS07295 PF03741 Integral membrane protein TerC family CIMIT_RS07300 PF01965 DJ-1/PfpI family CIMIT_RS07305 PF17854 FtsK alpha domain CIMIT_RS07305 PF09397 Ftsk gamma domain CIMIT_RS07305 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CIMIT_RS07305 PF01580 FtsK/SpoIIIE family CIMIT_RS07320 PF12706 Beta-lactamase superfamily domain CIMIT_RS07320 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CIMIT_RS07320 PF17770 Ribonuclease J C-terminal domain CIMIT_RS07325 PF00701 Dihydrodipicolinate synthetase family CIMIT_RS07330 PF02511 Thymidylate synthase complementing protein CIMIT_RS07335 PF01113 Dihydrodipicolinate reductase, N-terminus CIMIT_RS07335 PF05173 Dihydrodipicolinate reductase, C-terminus CIMIT_RS07375 PF00171 Aldehyde dehydrogenase family CIMIT_RS07380 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CIMIT_RS07380 PF00575 S1 RNA binding domain CIMIT_RS07380 PF01138 3' exoribonuclease family, domain 1 CIMIT_RS07380 PF00013 KH domain CIMIT_RS07385 PF00312 Ribosomal protein S15 CIMIT_RS07390 PF01156 Inosine-uridine preferring nucleoside hydrolase CIMIT_RS07395 PF06574 FAD synthetase CIMIT_RS07395 PF01687 Riboflavin kinase CIMIT_RS07400 PF01509 TruB family pseudouridylate synthase (N terminal domain) CIMIT_RS07400 PF09142 tRNA Pseudouridine synthase II, C terminal CIMIT_RS07400 PF16198 tRNA pseudouridylate synthase B C-terminal domain CIMIT_RS07405 PF01648 4'-phosphopantetheinyl transferase superfamily CIMIT_RS07405 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CIMIT_RS07410 PF00149 Calcineurin-like phosphoesterase CIMIT_RS07420 PF02272 DHHA1 domain CIMIT_RS07420 PF01368 DHH family CIMIT_RS07425 PF02033 Ribosome-binding factor A CIMIT_RS07430 PF04760 Translation initiation factor IF-2, N-terminal region CIMIT_RS07430 PF11987 Translation-initiation factor 2 CIMIT_RS07430 PF00009 Elongation factor Tu GTP binding domain CIMIT_RS07440 PF08529 NusA N-terminal domain CIMIT_RS07440 PF13184 NusA-like KH domain CIMIT_RS07445 PF17384 RimP C-terminal SH3 domain CIMIT_RS07445 PF02576 RimP N-terminal domain CIMIT_RS07455 PF04073 Aminoacyl-tRNA editing domain CIMIT_RS07455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIMIT_RS07455 PF03129 Anticodon binding domain CIMIT_RS07460 PF03883 Peroxide stress protein YaaA CIMIT_RS07480 PF02146 Sir2 family CIMIT_RS07490 PF10414 Sirohaem synthase dimerisation region CIMIT_RS07490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CIMIT_RS07490 PF14824 Sirohaem biosynthesis protein central CIMIT_RS07495 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CIMIT_RS07500 PF06039 Malate:quinone oxidoreductase (Mqo) CIMIT_RS07510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIMIT_RS07510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CIMIT_RS07525 PF00557 Metallopeptidase family M24 CIMIT_RS07530 PF00905 Penicillin binding protein transpeptidase domain CIMIT_RS07535 PF04551 GcpE protein CIMIT_RS07540 PF02163 Peptidase family M50 CIMIT_RS07540 PF17820 PDZ domain CIMIT_RS07545 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CIMIT_RS07545 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CIMIT_RS07545 PF13288 DXP reductoisomerase C-terminal domain CIMIT_RS07550 PF10939 Protein of unknown function (DUF2631) CIMIT_RS07555 PF04055 Radical SAM superfamily CIMIT_RS07565 PF01765 Ribosome recycling factor CIMIT_RS07570 PF01425 Amidase CIMIT_RS07575 PF00696 Amino acid kinase family CIMIT_RS07580 PF00889 Elongation factor TS CIMIT_RS07585 PF00318 Ribosomal protein S2 CIMIT_RS07590 PF01551 Peptidase family M23 CIMIT_RS07595 PF02899 Phage integrase, N-terminal SAM-like domain CIMIT_RS07595 PF00589 Phage integrase family CIMIT_RS07600 PF17782 DprA winged helix domain CIMIT_RS07600 PF02481 DNA recombination-mediator protein A CIMIT_RS07605 PF13335 Magnesium chelatase, subunit ChlI C-terminal CIMIT_RS07605 PF01078 Magnesium chelatase, subunit ChlI CIMIT_RS07610 PF02021 Uncharacterised protein family UPF0102 CIMIT_RS07615 PF10611 Protein of unknown function (DUF2469) CIMIT_RS07620 PF01351 Ribonuclease HII CIMIT_RS07625 PF10502 Signal peptidase, peptidase S26 CIMIT_RS07630 PF01245 Ribosomal protein L19 CIMIT_RS07635 PF09371 Tex-like protein N-terminal domain CIMIT_RS07635 PF00575 S1 RNA binding domain CIMIT_RS07635 PF16921 Tex protein YqgF-like domain CIMIT_RS07635 PF17674 HHH domain CIMIT_RS07640 PF01746 tRNA (Guanine-1)-methyltransferase CIMIT_RS07645 PF01782 RimM N-terminal domain CIMIT_RS07645 PF05239 PRC-barrel domain CIMIT_RS07655 PF00886 Ribosomal protein S16 CIMIT_RS07660 PF01757 Acyltransferase family CIMIT_RS07665 PF00448 SRP54-type protein, GTPase domain CIMIT_RS07665 PF02881 SRP54-type protein, helical bundle domain CIMIT_RS07665 PF02978 Signal peptide binding domain CIMIT_RS07670 PF00448 SRP54-type protein, GTPase domain CIMIT_RS07670 PF02881 SRP54-type protein, helical bundle domain CIMIT_RS07675 PF02463 RecF/RecN/SMC N terminal domain CIMIT_RS07675 PF06470 SMC proteins Flexible Hinge Domain CIMIT_RS07680 PF00708 Acylphosphatase CIMIT_RS07685 PF01235 Sodium:alanine symporter family CIMIT_RS07690 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CIMIT_RS07690 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CIMIT_RS07690 PF06827 Zinc finger found in FPG and IleRS CIMIT_RS07695 PF14622 Ribonuclease-III-like CIMIT_RS07695 PF00035 Double-stranded RNA binding motif CIMIT_RS07700 PF02620 Large ribosomal RNA subunit accumulation protein YceD CIMIT_RS07710 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CIMIT_RS07710 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CIMIT_RS07715 PF02595 Glycerate kinase family CIMIT_RS07730 PF07687 Peptidase dimerisation domain CIMIT_RS07730 PF01546 Peptidase family M20/M25/M40 CIMIT_RS07735 PF00343 Carbohydrate phosphorylase CIMIT_RS07740 PF00425 chorismate binding enzyme CIMIT_RS07740 PF04715 Anthranilate synthase component I, N terminal region CIMIT_RS07740 PF00117 Glutamine amidotransferase class-I CIMIT_RS07750 PF17755 UvrA DNA-binding domain CIMIT_RS07755 PF00224 Pyruvate kinase, barrel domain CIMIT_RS07755 PF02887 Pyruvate kinase, alpha/beta domain CIMIT_RS07760 PF01790 Prolipoprotein diacylglyceryl transferase CIMIT_RS07765 PF00218 Indole-3-glycerol phosphate synthase CIMIT_RS07775 PF01502 Phosphoribosyl-AMP cyclohydrolase CIMIT_RS07780 PF00977 Histidine biosynthesis protein CIMIT_RS07785 PF00459 Inositol monophosphatase family CIMIT_RS07790 PF00977 Histidine biosynthesis protein CIMIT_RS07795 PF00117 Glutamine amidotransferase class-I CIMIT_RS07810 PF00475 Imidazoleglycerol-phosphate dehydratase CIMIT_RS07815 PF00155 Aminotransferase class I and II CIMIT_RS07820 PF00815 Histidinol dehydrogenase CIMIT_RS07850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CIMIT_RS07850 PF00128 Alpha amylase, catalytic domain CIMIT_RS07865 PF00128 Alpha amylase, catalytic domain CIMIT_RS07885 PF01205 Uncharacterized protein family UPF0029 CIMIT_RS07885 PF09186 Domain of unknown function (DUF1949) CIMIT_RS07890 PF00128 Alpha amylase, catalytic domain CIMIT_RS07890 PF11941 Domain of unknown function (DUF3459) CIMIT_RS07895 PF00291 Pyridoxal-phosphate dependent enzyme CIMIT_RS07895 PF00585 C-terminal regulatory domain of Threonine dehydratase CIMIT_RS07915 PF02811 PHP domain CIMIT_RS07915 PF14579 Helix-hairpin-helix motif CIMIT_RS07915 PF07733 Bacterial DNA polymerase III alpha NTPase domain CIMIT_RS07915 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CIMIT_RS07920 PF12704 MacB-like periplasmic core domain CIMIT_RS07920 PF02687 FtsX-like permease family CIMIT_RS07925 PF00005 ABC transporter CIMIT_RS07940 PF00849 RNA pseudouridylate synthase CIMIT_RS07945 PF01252 Signal peptidase (SPase) II CIMIT_RS07955 PF00005 ABC transporter CIMIT_RS07965 PF17763 Glutaminase/Asparaginase C-terminal domain CIMIT_RS07965 PF00710 Asparaginase, N-terminal CIMIT_RS07970 PF11798 IMS family HHH motif CIMIT_RS07970 PF11799 impB/mucB/samB family C-terminal domain CIMIT_RS07970 PF00817 impB/mucB/samB family CIMIT_RS07975 PF00133 tRNA synthetases class I (I, L, M and V) CIMIT_RS07975 PF08264 Anticodon-binding domain of tRNA CIMIT_RS07980 PF05103 DivIVA protein CIMIT_RS07990 PF04472 Cell division protein SepF CIMIT_RS07995 PF01168 Alanine racemase, N-terminal domain CIMIT_RS08000 PF02578 Multi-copper polyphenol oxidoreductase laccase CIMIT_RS08005 PF00091 Tubulin/FtsZ family, GTPase domain CIMIT_RS08005 PF12327 FtsZ family, C-terminal domain CIMIT_RS08010 PF03799 Cell division protein FtsQ CIMIT_RS08010 PF08478 POTRA domain, FtsQ-type CIMIT_RS08015 PF02875 Mur ligase family, glutamate ligase domain CIMIT_RS08015 PF01225 Mur ligase family, catalytic domain CIMIT_RS08015 PF08245 Mur ligase middle domain CIMIT_RS08020 PF03033 Glycosyltransferase family 28 N-terminal domain CIMIT_RS08020 PF04101 Glycosyltransferase family 28 C-terminal domain CIMIT_RS08025 PF01098 Cell cycle protein CIMIT_RS08030 PF08245 Mur ligase middle domain CIMIT_RS08035 PF00953 Glycosyl transferase family 4 CIMIT_RS08035 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CIMIT_RS08040 PF01225 Mur ligase family, catalytic domain CIMIT_RS08040 PF02875 Mur ligase family, glutamate ligase domain CIMIT_RS08040 PF08245 Mur ligase middle domain CIMIT_RS08045 PF01225 Mur ligase family, catalytic domain CIMIT_RS08045 PF02875 Mur ligase family, glutamate ligase domain CIMIT_RS08045 PF08245 Mur ligase middle domain CIMIT_RS08050 PF03717 Penicillin-binding Protein dimerisation domain CIMIT_RS08050 PF00905 Penicillin binding protein transpeptidase domain CIMIT_RS08060 PF01795 MraW methylase family CIMIT_RS08065 PF02381 MraZ protein, putative antitoxin-like CIMIT_RS08085 PF00348 Polyprenyl synthetase CIMIT_RS08100 PF18367 Rv2175c C-terminal domain of unknown function CIMIT_RS08105 PF00069 Protein kinase domain CIMIT_RS08110 PF01474 Class-II DAHP synthetase family CIMIT_RS08115 PF16473 3' exoribonuclease, RNase T-like CIMIT_RS08130 PF00480 ROK family CIMIT_RS08135 PF13439 Glycosyltransferase Family 4 CIMIT_RS08135 PF00534 Glycosyl transferases group 1 CIMIT_RS08140 PF00877 NlpC/P60 family CIMIT_RS08145 PF00877 NlpC/P60 family CIMIT_RS08150 PF13631 Cytochrome b(N-terminal)/b6/petB CIMIT_RS08155 PF00355 Rieske [2Fe-2S] domain CIMIT_RS08160 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CIMIT_RS08160 PF00034 Cytochrome c CIMIT_RS08165 PF00510 Cytochrome c oxidase subunit III CIMIT_RS08170 PF12270 Cytochrome c oxidase subunit IV CIMIT_RS08175 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CIMIT_RS08180 PF13537 Glutamine amidotransferase domain CIMIT_RS08180 PF00733 Asparagine synthase CIMIT_RS08185 PF03572 Peptidase family S41 CIMIT_RS08190 PF01521 Iron-sulphur cluster biosynthesis CIMIT_RS08195 PF11241 Protein of unknown function (DUF3043) CIMIT_RS08200 PF02277 Phosphoribosyltransferase CIMIT_RS08205 PF01063 Amino-transferase class IV CIMIT_RS08210 PF00883 Cytosol aminopeptidase family, catalytic domain CIMIT_RS08210 PF02789 Cytosol aminopeptidase family, N-terminal domain CIMIT_RS08220 PF02817 e3 binding domain CIMIT_RS08220 PF00364 Biotin-requiring enzyme CIMIT_RS08220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CIMIT_RS08225 PF02347 Glycine cleavage system P-protein CIMIT_RS08230 PF08669 Glycine cleavage T-protein C-terminal barrel domain CIMIT_RS08230 PF01571 Aminomethyltransferase folate-binding domain CIMIT_RS08235 PF01597 Glycine cleavage H-protein CIMIT_RS08240 PF03099 Biotin/lipoate A/B protein ligase family CIMIT_RS08245 PF04055 Radical SAM superfamily CIMIT_RS08250 PF13829 Domain of unknown function (DUF4191) CIMIT_RS08265 PF00120 Glutamine synthetase, catalytic domain CIMIT_RS08265 PF03951 Glutamine synthetase, beta-Grasp domain CIMIT_RS08340 PF14821 Threonine synthase N terminus CIMIT_RS08340 PF00291 Pyridoxal-phosphate dependent enzyme CIMIT_RS08360 PF03710 Glutamate-ammonia ligase adenylyltransferase CIMIT_RS08360 PF08335 GlnD PII-uridylyltransferase CIMIT_RS08365 PF00120 Glutamine synthetase, catalytic domain CIMIT_RS08365 PF03951 Glutamine synthetase, beta-Grasp domain CIMIT_RS08370 PF05235 CHAD domain CIMIT_RS08370 PF01928 CYTH domain CIMIT_RS08385 PF00575 S1 RNA binding domain CIMIT_RS08385 PF00773 RNB domain CIMIT_RS08390 PF00300 Histidine phosphatase superfamily (branch 1) CIMIT_RS08390 PF13456 Reverse transcriptase-like CIMIT_RS08400 PF01784 NIF3 (NGG1p interacting factor 3) CIMIT_RS08410 PF01451 Low molecular weight phosphotyrosine protein phosphatase CIMIT_RS08415 PF02104 SURF1 family CIMIT_RS08450 PF17831 Pyruvate dehydrogenase E1 component middle domain CIMIT_RS08450 PF00456 Transketolase, thiamine diphosphate binding domain CIMIT_RS08470 PF13344 Haloacid dehalogenase-like hydrolase CIMIT_RS08475 PF00171 Aldehyde dehydrogenase family CIMIT_RS08485 PF00743 Flavin-binding monooxygenase-like CIMIT_RS08495 PF01156 Inosine-uridine preferring nucleoside hydrolase CIMIT_RS08500 PF07690 Major Facilitator Superfamily CIMIT_RS08515 PF00144 Beta-lactamase CIMIT_RS08515 PF07930 D-aminopeptidase, domain B CIMIT_RS08520 PF03806 AbgT putative transporter family CIMIT_RS08615 PF00872 Transposase, Mutator family CIMIT_RS08620 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CIMIT_RS08620 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CIMIT_RS08620 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CIMIT_RS08625 PF00005 ABC transporter CIMIT_RS08625 PF01476 LysM domain CIMIT_RS08660 PF02350 UDP-N-acetylglucosamine 2-epimerase CIMIT_RS08670 PF02541 Ppx/GppA phosphatase family CIMIT_RS08695 PF00113 Enolase, C-terminal TIM barrel domain CIMIT_RS08695 PF03952 Enolase, N-terminal domain CIMIT_RS08710 PF03819 MazG nucleotide pyrophosphohydrolase domain CIMIT_RS08725 PF08278 DNA primase DnaG DnaB-binding CIMIT_RS08725 PF13662 Toprim domain CIMIT_RS08725 PF08275 DNA primase catalytic core, N-terminal domain CIMIT_RS08725 PF01807 CHC2 zinc finger CIMIT_RS08725 PF10410 DnaB-helicase binding domain of primase CIMIT_RS08730 PF00545 ribonuclease CIMIT_RS08750 PF13722 5TM C-terminal transporter carbon starvation CstA CIMIT_RS08750 PF02554 Carbon starvation protein CstA CIMIT_RS08760 PF02374 Anion-transporting ATPase CIMIT_RS08765 PF01966 HD domain CIMIT_RS08765 PF13286 Phosphohydrolase-associated domain CIMIT_RS08785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIMIT_RS08785 PF03129 Anticodon binding domain CIMIT_RS08795 PF01475 Ferric uptake regulator family CIMIT_RS08800 PF01255 Putative undecaprenyl diphosphate synthase CIMIT_RS08805 PF02565 Recombination protein O C terminal CIMIT_RS08805 PF11967 Recombination protein O N terminal CIMIT_RS08810 PF07650 KH domain CIMIT_RS08810 PF01926 50S ribosome-binding GTPase CIMIT_RS08830 PF03069 Acetamidase/Formamidase family CIMIT_RS08835 PF08543 Phosphomethylpyrimidine kinase CIMIT_RS08840 PF08543 Phosphomethylpyrimidine kinase CIMIT_RS08845 PF00571 CBS domain CIMIT_RS08845 PF01595 Cyclin M transmembrane N-terminal domain CIMIT_RS08845 PF03471 Transporter associated domain CIMIT_RS08850 PF02130 Uncharacterized protein family UPF0054 CIMIT_RS08855 PF02562 PhoH-like protein CIMIT_RS08860 PF04452 RNA methyltransferase CIMIT_RS08865 PF00684 DnaJ central domain CIMIT_RS08865 PF01556 DnaJ C terminal domain CIMIT_RS08865 PF00226 DnaJ domain CIMIT_RS08870 PF01628 HrcA protein C terminal domain CIMIT_RS08875 PF04055 Radical SAM superfamily CIMIT_RS08885 PF00501 AMP-binding enzyme CIMIT_RS08890 PF02446 4-alpha-glucanotransferase CIMIT_RS08900 PF01432 Peptidase family M3 CIMIT_RS08905 PF00135 Carboxylesterase family CIMIT_RS08910 PF00293 NUDIX domain CIMIT_RS08920 PF00664 ABC transporter transmembrane region CIMIT_RS08920 PF00005 ABC transporter CIMIT_RS08925 PF00155 Aminotransferase class I and II CIMIT_RS08930 PF16657 Maltogenic Amylase, C-terminal domain CIMIT_RS08930 PF00128 Alpha amylase, catalytic domain CIMIT_RS08935 PF01636 Phosphotransferase enzyme family CIMIT_RS08935 PF18085 Maltokinase N-terminal cap domain CIMIT_RS08940 PF05525 Branched-chain amino acid transport protein CIMIT_RS08945 PF00296 Luciferase-like monooxygenase CIMIT_RS08950 PF00392 Bacterial regulatory proteins, gntR family CIMIT_RS08950 PF07702 UTRA domain CIMIT_RS08955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CIMIT_RS08960 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS08965 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS08970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CIMIT_RS08970 PF00005 ABC transporter CIMIT_RS08975 PF00294 pfkB family carbohydrate kinase CIMIT_RS08980 PF00561 alpha/beta hydrolase fold CIMIT_RS08995 PF00679 Elongation factor G C-terminus CIMIT_RS08995 PF00009 Elongation factor Tu GTP binding domain CIMIT_RS08995 PF03144 Elongation factor Tu domain 2 CIMIT_RS08995 PF06421 GTP-binding protein LepA C-terminus CIMIT_RS09005 PF01649 Ribosomal protein S20 CIMIT_RS09040 PF02645 Uncharacterised protein, DegV family COG1307 CIMIT_RS09045 PF00300 Histidine phosphatase superfamily (branch 1) CIMIT_RS09055 PF01467 Cytidylyltransferase-like CIMIT_RS09065 PF00171 Aldehyde dehydrogenase family CIMIT_RS09070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CIMIT_RS09075 PF00696 Amino acid kinase family CIMIT_RS09075 PF01472 PUA domain CIMIT_RS09080 PF09269 Domain of unknown function (DUF1967) CIMIT_RS09080 PF01018 GTP1/OBG CIMIT_RS09080 PF01926 50S ribosome-binding GTPase CIMIT_RS09095 PF01016 Ribosomal L27 protein CIMIT_RS09100 PF00829 Ribosomal prokaryotic L21 protein CIMIT_RS09105 PF10150 Ribonuclease E/G family CIMIT_RS09115 PF00334 Nucleoside diphosphate kinase CIMIT_RS09125 PF13193 AMP-binding enzyme C-terminal domain CIMIT_RS09125 PF00501 AMP-binding enzyme CIMIT_RS09140 PF08245 Mur ligase middle domain CIMIT_RS09140 PF02875 Mur ligase family, glutamate ligase domain CIMIT_RS09145 PF10458 Valyl tRNA synthetase tRNA binding arm CIMIT_RS09145 PF00133 tRNA synthetases class I (I, L, M and V) CIMIT_RS09145 PF08264 Anticodon-binding domain of tRNA CIMIT_RS09150 PF00056 lactate/malate dehydrogenase, NAD binding domain CIMIT_RS09150 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CIMIT_RS09160 PF07724 AAA domain (Cdc48 subfamily) CIMIT_RS09160 PF06689 ClpX C4-type zinc finger CIMIT_RS09160 PF10431 C-terminal, D2-small domain, of ClpB protein CIMIT_RS09165 PF00561 alpha/beta hydrolase fold CIMIT_RS09180 PF00574 Clp protease CIMIT_RS09185 PF00574 Clp protease CIMIT_RS09190 PF05697 Bacterial trigger factor protein (TF) CIMIT_RS09190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIMIT_RS09190 PF05698 Bacterial trigger factor protein (TF) C-terminus CIMIT_RS09210 PF01012 Electron transfer flavoprotein domain CIMIT_RS09215 PF00766 Electron transfer flavoprotein FAD-binding domain CIMIT_RS09215 PF01012 Electron transfer flavoprotein domain CIMIT_RS09225 PF00248 Aldo/keto reductase family CIMIT_RS09230 PF00155 Aminotransferase class I and II CIMIT_RS09230 PF03744 6-carboxyhexanoate--CoA ligase CIMIT_RS09235 PF03744 6-carboxyhexanoate--CoA ligase CIMIT_RS09240 PF00202 Aminotransferase class-III CIMIT_RS09250 PF13635 Domain of unknown function (DUF4143) CIMIT_RS09250 PF13173 AAA domain CIMIT_RS09255 PF02502 Ribose/Galactose Isomerase CIMIT_RS09260 PF01323 DSBA-like thioredoxin domain CIMIT_RS09265 PF11838 ERAP1-like C-terminal domain CIMIT_RS09265 PF01433 Peptidase family M1 domain CIMIT_RS09270 PF01053 Cys/Met metabolism PLP-dependent enzyme CIMIT_RS09275 PF00924 Mechanosensitive ion channel CIMIT_RS09280 PF01152 Bacterial-like globin CIMIT_RS09295 PF12848 ABC transporter CIMIT_RS09295 PF00005 ABC transporter CIMIT_RS09305 PF05425 Copper resistance protein D CIMIT_RS09330 PF00106 short chain dehydrogenase CIMIT_RS09335 PF00929 Exonuclease CIMIT_RS09345 PF04954 Siderophore-interacting protein CIMIT_RS09345 PF08021 Siderophore-interacting FAD-binding domain CIMIT_RS09350 PF00543 Nitrogen regulatory protein P-II CIMIT_RS09355 PF00909 Ammonium Transporter Family CIMIT_RS09360 PF03734 L,D-transpeptidase catalytic domain CIMIT_RS09360 PF17964 Bacterial Ig domain CIMIT_RS09370 PF00857 Isochorismatase family CIMIT_RS09380 PF00578 AhpC/TSA family CIMIT_RS09400 PF12823 Domain of unknown function (DUF3817) CIMIT_RS09410 PF01725 Ham1 family CIMIT_RS09415 PF01138 3' exoribonuclease family, domain 1 CIMIT_RS09415 PF03725 3' exoribonuclease family, domain 2 CIMIT_RS09420 PF12706 Beta-lactamase superfamily domain CIMIT_RS09425 PF01177 Asp/Glu/Hydantoin racemase CIMIT_RS09430 PF01694 Rhomboid family CIMIT_RS09435 PF03576 Peptidase family S58 CIMIT_RS09445 PF02617 ATP-dependent Clp protease adaptor protein ClpS CIMIT_RS09455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CIMIT_RS09455 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CIMIT_RS09460 PF13307 Helicase C-terminal domain CIMIT_RS09475 PF00115 Cytochrome C and Quinol oxidase polypeptide I CIMIT_RS09480 PF00268 Ribonucleotide reductase, small chain CIMIT_RS09485 PF00392 Bacterial regulatory proteins, gntR family CIMIT_RS09485 PF07729 FCD domain CIMIT_RS09490 PF02867 Ribonucleotide reductase, barrel domain CIMIT_RS09490 PF00317 Ribonucleotide reductase, all-alpha domain CIMIT_RS09490 PF08343 Ribonucleotide reductase N-terminal CIMIT_RS09495 PF07972 NrdI Flavodoxin like CIMIT_RS09515 PF00444 Ribosomal protein L36 CIMIT_RS09520 PF00083 Sugar (and other) transporter CIMIT_RS09525 PF02540 NAD synthase CIMIT_RS09545 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CIMIT_RS09545 PF02805 Metal binding domain of Ada CIMIT_RS09545 PF12833 Helix-turn-helix domain CIMIT_RS09545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CIMIT_RS09585 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CIMIT_RS09585 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CIMIT_RS09585 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CIMIT_RS09585 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CIMIT_RS09590 PF01235 Sodium:alanine symporter family CIMIT_RS09595 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CIMIT_RS09600 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CIMIT_RS09620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CIMIT_RS09625 PF13185 GAF domain CIMIT_RS09625 PF00196 Bacterial regulatory proteins, luxR family CIMIT_RS09630 PF00291 Pyridoxal-phosphate dependent enzyme CIMIT_RS09635 PF00132 Bacterial transferase hexapeptide (six repeats) CIMIT_RS09635 PF06426 Serine acetyltransferase, N-terminal CIMIT_RS09655 PF01979 Amidohydrolase family CIMIT_RS09660 PF01175 Urocanase Rossmann-like domain CIMIT_RS09660 PF17392 Urocanase C-terminal domain CIMIT_RS09660 PF17391 Urocanase N-terminal domain CIMIT_RS09665 PF07670 Nucleoside recognition CIMIT_RS09670 PF02515 CoA-transferase family III CIMIT_RS09675 PF02770 Acyl-CoA dehydrogenase, middle domain CIMIT_RS09675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CIMIT_RS09675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CIMIT_RS09680 PF00221 Aromatic amino acid lyase CIMIT_RS09685 PF00491 Arginase family CIMIT_RS09690 PF07670 Nucleoside recognition CIMIT_RS09725 PF02583 Metal-sensitive transcriptional repressor CIMIT_RS09735 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CIMIT_RS09735 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CIMIT_RS09740 PF01207 Dihydrouridine synthase (Dus) CIMIT_RS09745 PF01895 PhoU domain CIMIT_RS09750 PF00005 ABC transporter CIMIT_RS09755 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS09760 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS09765 PF12849 PBP superfamily domain CIMIT_RS09770 PF00583 Acetyltransferase (GNAT) family CIMIT_RS09770 PF13508 Acetyltransferase (GNAT) domain CIMIT_RS09780 PF08768 Domain of unknown function (DUF1794) CIMIT_RS09800 PF02769 AIR synthase related protein, C-terminal domain CIMIT_RS09800 PF00586 AIR synthase related protein, N-terminal domain CIMIT_RS09805 PF00156 Phosphoribosyl transferase domain CIMIT_RS09825 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CIMIT_RS09825 PF02769 AIR synthase related protein, C-terminal domain CIMIT_RS09825 PF00586 AIR synthase related protein, N-terminal domain CIMIT_RS09835 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CIMIT_RS09855 PF00326 Prolyl oligopeptidase family CIMIT_RS09855 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CIMIT_RS09860 PF01259 SAICAR synthetase CIMIT_RS09870 PF00206 Lyase CIMIT_RS09870 PF10397 Adenylosuccinate lyase C-terminus CIMIT_RS09875 PF02844 Phosphoribosylglycinamide synthetase, N domain CIMIT_RS09875 PF02843 Phosphoribosylglycinamide synthetase, C domain CIMIT_RS09875 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CIMIT_RS09880 PF01230 HIT domain CIMIT_RS09885 PF00672 HAMP domain CIMIT_RS09885 PF00512 His Kinase A (phospho-acceptor) domain CIMIT_RS09885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIMIT_RS09890 PF00072 Response regulator receiver domain CIMIT_RS09890 PF00486 Transcriptional regulatory protein, C terminal CIMIT_RS09910 PF00982 Glycosyltransferase family 20 CIMIT_RS09925 PF00356 Bacterial regulatory proteins, lacI family CIMIT_RS09935 PF00005 ABC transporter CIMIT_RS09940 PF00950 ABC 3 transport family CIMIT_RS09945 PF08032 RNA 2'-O ribose methyltransferase substrate binding CIMIT_RS09945 PF00588 SpoU rRNA Methylase family CIMIT_RS09950 PF01406 tRNA synthetases class I (C) catalytic domain CIMIT_RS09950 PF09190 DALR domain CIMIT_RS09955 PF02542 YgbB family CIMIT_RS09960 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CIMIT_RS09965 PF02559 CarD-like/TRCF domain CIMIT_RS09975 PF06745 KaiC CIMIT_RS09975 PF18073 Rubredoxin metal binding domain CIMIT_RS09990 PF00633 Helix-hairpin-helix motif CIMIT_RS09990 PF10576 Iron-sulfur binding domain of endonuclease III CIMIT_RS09990 PF00730 HhH-GPD superfamily base excision DNA repair protein CIMIT_RS09995 PF02535 ZIP Zinc transporter CIMIT_RS10005 PF07724 AAA domain (Cdc48 subfamily) CIMIT_RS10005 PF17871 AAA lid domain CIMIT_RS10005 PF02861 Clp amino terminal domain, pathogenicity island component CIMIT_RS10005 PF10431 C-terminal, D2-small domain, of ClpB protein CIMIT_RS10005 PF00004 ATPase family associated with various cellular activities (AAA) CIMIT_RS10015 PF00391 PEP-utilising enzyme, mobile domain CIMIT_RS10015 PF05524 PEP-utilising enzyme, N-terminal CIMIT_RS10015 PF02896 PEP-utilising enzyme, TIM barrel domain CIMIT_RS10020 PF03123 CAT RNA binding domain CIMIT_RS10020 PF00874 PRD domain CIMIT_RS10025 PF02378 Phosphotransferase system, EIIC CIMIT_RS10025 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CIMIT_RS10025 PF00367 phosphotransferase system, EIIB CIMIT_RS10035 PF01336 OB-fold nucleic acid binding domain CIMIT_RS10035 PF00152 tRNA synthetases class II (D, K and N) CIMIT_RS10040 PF07690 Major Facilitator Superfamily CIMIT_RS10050 PF02569 Pantoate-beta-alanine ligase CIMIT_RS10070 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CIMIT_RS10075 PF02152 Dihydroneopterin aldolase CIMIT_RS10080 PF00809 Pterin binding enzyme CIMIT_RS10085 PF01227 GTP cyclohydrolase I CIMIT_RS10090 PF01434 Peptidase family M41 CIMIT_RS10090 PF17862 AAA+ lid domain CIMIT_RS10090 PF00004 ATPase family associated with various cellular activities (AAA) CIMIT_RS10095 PF00156 Phosphoribosyl transferase domain CIMIT_RS10100 PF01171 PP-loop family CIMIT_RS10105 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CIMIT_RS10110 PF00719 Inorganic pyrophosphatase CIMIT_RS10130 PF00581 Rhodanese-like domain CIMIT_RS10140 PF03976 Polyphosphate kinase 2 (PPK2) CIMIT_RS10145 PF00118 TCP-1/cpn60 chaperonin family CIMIT_RS10150 PF01546 Peptidase family M20/M25/M40 CIMIT_RS10150 PF07687 Peptidase dimerisation domain CIMIT_RS10155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CIMIT_RS10155 PF13244 Domain of unknown function (DUF4040) CIMIT_RS10155 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CIMIT_RS10155 PF00361 Proton-conducting membrane transporter CIMIT_RS10160 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CIMIT_RS10165 PF00361 Proton-conducting membrane transporter CIMIT_RS10185 PF04107 Glutamate-cysteine ligase family 2(GCS2) CIMIT_RS10215 PF00746 LPXTG cell wall anchor motif CIMIT_RS10215 PF16555 Gram-positive pilin subunit D1, N-terminal domain CIMIT_RS10225 PF01327 Polypeptide deformylase CIMIT_RS10245 PF13396 Phospholipase_D-nuclease N-terminal CIMIT_RS10245 PF13091 PLD-like domain CIMIT_RS10255 PF00005 ABC transporter CIMIT_RS10260 PF00293 NUDIX domain CIMIT_RS10270 PF00497 Bacterial extracellular solute-binding proteins, family 3 CIMIT_RS10275 PF00069 Protein kinase domain CIMIT_RS10275 PF16919 Protein kinase G rubredoxin domain CIMIT_RS10275 PF16918 Protein kinase G tetratricopeptide repeat CIMIT_RS10300 PF00871 Acetokinase family CIMIT_RS10305 PF01515 Phosphate acetyl/butaryl transferase CIMIT_RS10320 PF02222 ATP-grasp domain CIMIT_RS10325 PF00709 Adenylosuccinate synthetase CIMIT_RS10345 PF01116 Fructose-bisphosphate aldolase class-II CIMIT_RS10360 PF00156 Phosphoribosyl transferase domain CIMIT_RS10370 PF00581 Rhodanese-like domain CIMIT_RS10380 PF02548 Ketopantoate hydroxymethyltransferase CIMIT_RS10385 PF02569 Pantoate-beta-alanine ligase CIMIT_RS10400 PF00004 ATPase family associated with various cellular activities (AAA) CIMIT_RS10400 PF07724 AAA domain (Cdc48 subfamily) CIMIT_RS10400 PF17871 AAA lid domain CIMIT_RS10400 PF02861 Clp amino terminal domain, pathogenicity island component CIMIT_RS10400 PF10431 C-terminal, D2-small domain, of ClpB protein CIMIT_RS10430 PF00795 Carbon-nitrogen hydrolase CIMIT_RS10440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CIMIT_RS10440 PF00205 Thiamine pyrophosphate enzyme, central domain CIMIT_RS10440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CIMIT_RS10445 PF13411 MerR HTH family regulatory protein CIMIT_RS10450 PF00684 DnaJ central domain CIMIT_RS10450 PF00226 DnaJ domain CIMIT_RS10450 PF01556 DnaJ C terminal domain CIMIT_RS10455 PF01025 GrpE CIMIT_RS10460 PF00012 Hsp70 protein CIMIT_RS10470 PF00171 Aldehyde dehydrogenase family CIMIT_RS10475 PF00270 DEAD/DEAH box helicase CIMIT_RS10475 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CIMIT_RS10475 PF17191 RecG wedge domain CIMIT_RS10480 PF01594 AI-2E family transporter CIMIT_RS10485 PF01965 DJ-1/PfpI family CIMIT_RS10490 PF01925 Sulfite exporter TauE/SafE CIMIT_RS10500 PF00009 Elongation factor Tu GTP binding domain CIMIT_RS10505 PF01507 Phosphoadenosine phosphosulfate reductase family CIMIT_RS10510 PF01507 Phosphoadenosine phosphosulfate reductase family CIMIT_RS10520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CIMIT_RS10520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CIMIT_RS10525 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIMIT_RS10530 PF00072 Response regulator receiver domain CIMIT_RS10530 PF00196 Bacterial regulatory proteins, luxR family CIMIT_RS10555 PF00664 ABC transporter transmembrane region CIMIT_RS10555 PF00005 ABC transporter CIMIT_RS10560 PF00005 ABC transporter CIMIT_RS10560 PF00664 ABC transporter transmembrane region CIMIT_RS10565 PF02690 Na+/Pi-cotransporter CIMIT_RS10585 PF00155 Aminotransferase class I and II CIMIT_RS10590 PF01645 Conserved region in glutamate synthase CIMIT_RS10595 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CIMIT_RS10595 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CIMIT_RS10595 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CIMIT_RS10600 PF00692 dUTPase CIMIT_RS10625 PF00933 Glycosyl hydrolase family 3 N terminal domain CIMIT_RS10635 PF11847 Alpha-(1->3)-arabinofuranosyltransferase CIMIT_RS10665 PF13439 Glycosyltransferase Family 4 CIMIT_RS10665 PF00534 Glycosyl transferases group 1 CIMIT_RS10670 PF08241 Methyltransferase domain CIMIT_RS10685 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CIMIT_RS10685 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CIMIT_RS10690 PF02390 Putative methyltransferase CIMIT_RS10700 PF03176 MMPL family CIMIT_RS10730 PF01039 Carboxyl transferase domain CIMIT_RS10735 PF00975 Thioesterase domain CIMIT_RS10735 PF00698 Acyl transferase domain CIMIT_RS10735 PF16197 Ketoacyl-synthetase C-terminal extension CIMIT_RS10735 PF02801 Beta-ketoacyl synthase, C-terminal domain CIMIT_RS10735 PF00109 Beta-ketoacyl synthase, N-terminal domain CIMIT_RS10735 PF00550 Phosphopantetheine attachment site CIMIT_RS10740 PF00501 AMP-binding enzyme CIMIT_RS10745 PF01083 Cutinase CIMIT_RS10755 PF00756 Putative esterase CIMIT_RS10755 PF08310 LGFP repeat CIMIT_RS10760 PF08310 LGFP repeat CIMIT_RS10760 PF00756 Putative esterase CIMIT_RS10770 PF01040 UbiA prenyltransferase family CIMIT_RS10775 PF01569 PAP2 superfamily CIMIT_RS10780 PF17994 Galactofuranosyltransferase 2 N-terminal CIMIT_RS10790 PF00561 alpha/beta hydrolase fold CIMIT_RS10795 PF13378 Enolase C-terminal domain-like CIMIT_RS10795 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CIMIT_RS10800 PF00775 Dioxygenase CIMIT_RS10800 PF04444 Catechol dioxygenase N terminus CIMIT_RS10805 PF00355 Rieske [2Fe-2S] domain CIMIT_RS10805 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CIMIT_RS10810 PF00866 Ring hydroxylating beta subunit CIMIT_RS10815 PF00970 Oxidoreductase FAD-binding domain CIMIT_RS10815 PF00111 2Fe-2S iron-sulfur cluster binding domain CIMIT_RS10815 PF00175 Oxidoreductase NAD-binding domain CIMIT_RS10820 PF00106 short chain dehydrogenase CIMIT_RS10830 PF02426 Muconolactone delta-isomerase CIMIT_RS10835 PF01144 Coenzyme A transferase CIMIT_RS10840 PF01144 Coenzyme A transferase CIMIT_RS10845 PF09339 IclR helix-turn-helix domain CIMIT_RS10845 PF01614 Bacterial transcriptional regulator CIMIT_RS10850 PF00108 Thiolase, N-terminal domain CIMIT_RS10850 PF02803 Thiolase, C-terminal domain CIMIT_RS10870 PF00005 ABC transporter CIMIT_RS10875 PF01032 FecCD transport family CIMIT_RS10880 PF01032 FecCD transport family CIMIT_RS10905 PF03275 UDP-galactopyranose mutase CIMIT_RS10915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CIMIT_RS10915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CIMIT_RS10925 PF01553 Acyltransferase CIMIT_RS10930 PF02403 Seryl-tRNA synthetase N-terminal domain CIMIT_RS10930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIMIT_RS10935 PF07702 UTRA domain CIMIT_RS10935 PF00392 Bacterial regulatory proteins, gntR family CIMIT_RS10950 PF00800 Prephenate dehydratase CIMIT_RS10950 PF01842 ACT domain CIMIT_RS10960 PF03816 Cell envelope-related transcriptional attenuator domain CIMIT_RS10965 PF00005 ABC transporter CIMIT_RS10965 PF17912 MalK OB fold domain CIMIT_RS10975 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS10980 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS10990 PF03009 Glycerophosphoryl diester phosphodiesterase family CIMIT_RS10995 PF03009 Glycerophosphoryl diester phosphodiesterase family CIMIT_RS11005 PF01625 Peptide methionine sulfoxide reductase CIMIT_RS11010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CIMIT_RS11010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CIMIT_RS11030 PF00072 Response regulator receiver domain CIMIT_RS11030 PF00196 Bacterial regulatory proteins, luxR family CIMIT_RS11035 PF07730 Histidine kinase CIMIT_RS11035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIMIT_RS11035 PF00672 HAMP domain CIMIT_RS11060 PF02096 60Kd inner membrane protein CIMIT_RS11065 PF00440 Bacterial regulatory proteins, tetR family CIMIT_RS11070 PF04226 Transglycosylase associated protein CIMIT_RS11075 PF00582 Universal stress protein family CIMIT_RS11080 PF00849 RNA pseudouridylate synthase CIMIT_RS11105 PF00005 ABC transporter CIMIT_RS11110 PF00392 Bacterial regulatory proteins, gntR family CIMIT_RS11110 PF07729 FCD domain CIMIT_RS11120 PF04012 PspA/IM30 family CIMIT_RS11125 PF00085 Thioredoxin CIMIT_RS11140 PF00403 Heavy-metal-associated domain CIMIT_RS11150 PF03796 DnaB-like helicase C terminal domain CIMIT_RS11150 PF00772 DnaB-like helicase N terminal domain CIMIT_RS11155 PF00570 HRDC domain CIMIT_RS11155 PF00271 Helicase conserved C-terminal domain CIMIT_RS11155 PF00270 DEAD/DEAH box helicase CIMIT_RS11155 PF16124 RecQ zinc-binding CIMIT_RS11155 PF09382 RQC domain CIMIT_RS11165 PF01281 Ribosomal protein L9, N-terminal domain CIMIT_RS11165 PF03948 Ribosomal protein L9, C-terminal domain CIMIT_RS11170 PF00436 Single-strand binding protein family CIMIT_RS11175 PF01250 Ribosomal protein S6 CIMIT_RS11190 PF00912 Transglycosylase CIMIT_RS11190 PF00905 Penicillin binding protein transpeptidase domain CIMIT_RS11215 PF17773 UPF0176 acylphosphatase like domain CIMIT_RS11215 PF12368 Rhodanase C-terminal CIMIT_RS11220 PF12728 Helix-turn-helix domain CIMIT_RS11225 PF08903 Domain of unknown function (DUF1846) CIMIT_RS11230 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CIMIT_RS11230 PF06827 Zinc finger found in FPG and IleRS CIMIT_RS11230 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CIMIT_RS11235 PF01256 Carbohydrate kinase CIMIT_RS11235 PF03853 YjeF-related protein N-terminus CIMIT_RS11240 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIMIT_RS11265 PF07690 Major Facilitator Superfamily CIMIT_RS11270 PF00005 ABC transporter CIMIT_RS11270 PF09383 NIL domain CIMIT_RS11275 PF02687 FtsX-like permease family CIMIT_RS11280 PF07730 Histidine kinase CIMIT_RS11280 PF13185 GAF domain CIMIT_RS11280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIMIT_RS11280 PF13492 GAF domain CIMIT_RS11285 PF00072 Response regulator receiver domain CIMIT_RS11285 PF00196 Bacterial regulatory proteins, luxR family CIMIT_RS11290 PF07690 Major Facilitator Superfamily CIMIT_RS11315 PF02656 Domain of unknown function (DUF202) CIMIT_RS11340 PF09334 tRNA synthetases class I (M) CIMIT_RS11340 PF08264 Anticodon-binding domain of tRNA CIMIT_RS11340 PF13603 Leucyl-tRNA synthetase, Domain 2 CIMIT_RS11375 PF01930 Domain of unknown function DUF83 CIMIT_RS11375 PF01867 CRISPR associated protein Cas1 CIMIT_RS11380 PF09827 CRISPR associated protein Cas2 CIMIT_RS11385 PF00881 Nitroreductase family CIMIT_RS11400 PF16868 NMT1-like family CIMIT_RS11435 PF02661 Fic/DOC family CIMIT_RS11435 PF13784 Fic/DOC family N-terminal CIMIT_RS11460 PF00355 Rieske [2Fe-2S] domain CIMIT_RS11460 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CIMIT_RS11465 PF00866 Ring hydroxylating beta subunit CIMIT_RS11480 PF07690 Major Facilitator Superfamily CIMIT_RS11480 PF00083 Sugar (and other) transporter CIMIT_RS11485 PF00355 Rieske [2Fe-2S] domain CIMIT_RS11485 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CIMIT_RS11490 PF00355 Rieske [2Fe-2S] domain CIMIT_RS11495 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIMIT_RS11495 PF14759 Reductase C-terminal CIMIT_RS11500 PF00866 Ring hydroxylating beta subunit CIMIT_RS11505 PF00106 short chain dehydrogenase CIMIT_RS11510 PF13193 AMP-binding enzyme C-terminal domain CIMIT_RS11510 PF00501 AMP-binding enzyme CIMIT_RS11530 PF00561 alpha/beta hydrolase fold CIMIT_RS11535 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CIMIT_RS11540 PF01494 FAD binding domain CIMIT_RS11545 PF01557 Fumarylacetoacetate (FAA) hydrolase family CIMIT_RS11550 PF01118 Semialdehyde dehydrogenase, NAD binding domain CIMIT_RS11550 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CIMIT_RS11555 PF00682 HMGL-like CIMIT_RS11555 PF07836 DmpG-like communication domain CIMIT_RS11565 PF01769 Divalent cation transporter CIMIT_RS11565 PF03448 MgtE intracellular N domain CIMIT_RS11565 PF00571 CBS domain CIMIT_RS11590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CIMIT_RS11590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CIMIT_RS11595 PF01758 Sodium Bile acid symporter family CIMIT_RS11600 PF05025 RbsD / FucU transport protein family CIMIT_RS11605 PF07690 Major Facilitator Superfamily CIMIT_RS11610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CIMIT_RS11610 PF13378 Enolase C-terminal domain-like CIMIT_RS11615 PF01614 Bacterial transcriptional regulator CIMIT_RS11615 PF09339 IclR helix-turn-helix domain CIMIT_RS11630 PF00701 Dihydrodipicolinate synthetase family CIMIT_RS11635 PF00171 Aldehyde dehydrogenase family CIMIT_RS11640 PF04444 Catechol dioxygenase N terminus CIMIT_RS11640 PF00775 Dioxygenase CIMIT_RS11645 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CIMIT_RS11645 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CIMIT_RS11650 PF01613 Flavin reductase like domain CIMIT_RS11655 PF00196 Bacterial regulatory proteins, luxR family CIMIT_RS11680 PF03222 Tryptophan/tyrosine permease family CIMIT_RS11690 PF00107 Zinc-binding dehydrogenase CIMIT_RS11690 PF08240 Alcohol dehydrogenase GroES-like domain CIMIT_RS11695 PF03222 Tryptophan/tyrosine permease family CIMIT_RS11705 PF00005 ABC transporter CIMIT_RS11705 PF17912 MalK OB fold domain CIMIT_RS11720 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS11725 PF00528 Binding-protein-dependent transport system inner membrane component CIMIT_RS11770 PF00425 chorismate binding enzyme CIMIT_RS11770 PF04715 Anthranilate synthase component I, N terminal region CIMIT_RS11775 PF00117 Glutamine amidotransferase class-I CIMIT_RS11780 PF02885 Glycosyl transferase family, helical bundle domain CIMIT_RS11780 PF00591 Glycosyl transferase family, a/b domain CIMIT_RS11785 PF00218 Indole-3-glycerol phosphate synthase CIMIT_RS11785 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CIMIT_RS11790 PF00291 Pyridoxal-phosphate dependent enzyme CIMIT_RS11795 PF00290 Tryptophan synthase alpha chain CIMIT_RS11805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CIMIT_RS11810 PF13593 SBF-like CPA transporter family (DUF4137) CIMIT_RS11835 PF03591 AzlC protein CIMIT_RS11845 PF01743 Poly A polymerase head domain CIMIT_RS11845 PF12627 Probable RNA and SrmB- binding site of polymerase A CIMIT_RS11845 PF13735 tRNA nucleotidyltransferase domain 2 putative CIMIT_RS11850 PF00293 NUDIX domain CIMIT_RS11860 PF03023 Lipid II flippase MurJ CIMIT_RS11865 PF08281 Sigma-70, region 4 CIMIT_RS11865 PF04542 Sigma-70 region 2 CIMIT_RS11870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIMIT_RS11875 PF00085 Thioredoxin CIMIT_RS11880 PF01520 N-acetylmuramoyl-L-alanine amidase CIMIT_RS11880 PF01471 Putative peptidoglycan binding domain CIMIT_RS11895 PF02195 ParB-like nuclease domain CIMIT_RS11895 PF17762 HTH domain found in ParB protein CIMIT_RS11900 PF13614 AAA domain CIMIT_RS11905 PF02527 rRNA small subunit methyltransferase G CIMIT_RS11910 PF02096 60Kd inner membrane protein CIMIT_RS11915 PF01809 Putative membrane protein insertion efficiency factor CIMIT_RS11920 PF00825 Ribonuclease P CIMIT_RS11925 PF00468 Ribosomal protein L34 CIMIT_RS11970 PF01791 DeoC/LacD family aldolase CIMIT_RS11995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIMIT_RS11995 PF07730 Histidine kinase CIMIT_RS12035 PF00877 NlpC/P60 family CIMIT_RS12040 PF08548 Peptidase M10 serralysin C terminal CIMIT_RS12040 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CIMIT_RS12040 PF00413 Matrixin CIMIT_RS12110 PF00005 ABC transporter CIMIT_RS12125 PF00574 Clp protease CIMIT_RS12145 PF00565 Staphylococcal nuclease homologue CIMIT_RS12185 PF17866 AAA lid domain CIMIT_RS12185 PF00004 ATPase family associated with various cellular activities (AAA) CIMIT_RS12190 PF00440 Bacterial regulatory proteins, tetR family CIMIT_RS12205 PF03641 Possible lysine decarboxylase