locus-tag	class	description
Cp29156_RS00015	COG0592	DNA-directed DNA polymerase activity
Cp29156_RS00030	COG0187	DNA topoisomerase II activity
Cp29156_RS00050	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
Cp29156_RS00140	COG1120	ATPase activity
Cp29156_RS00145	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Cp29156_RS00150	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Cp29156_RS00155	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
Cp29156_RS00165	COG0515	serine threonine protein kinase
Cp29156_RS00165	COG2815	serine threonine protein kinase
Cp29156_RS00170	COG0515	serine threonine protein kinase
Cp29156_RS00175	COG0768	penicillin binding
Cp29156_RS00195	COG1716	ATPase activity
Cp29156_RS00195	COG1716	ATPase activity
Cp29156_RS00225	COG1120	ATPase activity
Cp29156_RS00230	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Cp29156_RS00235	COG2239	Acts as a magnesium transporter
Cp29156_RS00240	COG0366	Alpha amylase catalytic
Cp29156_RS00295	COG0517	IMP dehydrogenase activity
Cp29156_RS00295	COG1125	glycine betaine transport
Cp29156_RS00305	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Cp29156_RS00325	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
Cp29156_RS00335	COG3757	hydrolase, family 25
Cp29156_RS00335	COG3409	Peptidoglycan-binding domain 1 protein
Cp29156_RS00360	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Cp29156_RS00385	COG1846	Transcriptional regulator
Cp29156_RS00400	COG3180	Ammonia monooxygenase
Cp29156_RS00410	COG0730	response to heat
Cp29156_RS00425	COG1643	Atp-dependent helicase
Cp29156_RS00435	COG0519	Catalyzes the synthesis of GMP from XMP
Cp29156_RS00445	COG0393	Putative heavy-metal-binding
Cp29156_RS00450	COG2501	S4 domain
Cp29156_RS00475	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
Cp29156_RS00480	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
Cp29156_RS00490	COG3590	peptidase
Cp29156_RS00520	COG1028	Short-chain dehydrogenase reductase Sdr
Cp29156_RS00525	COG0277	FAD linked oxidase domain protein
Cp29156_RS00555	COG1216	Glycosyl transferase, family 2
Cp29156_RS00565	COG1121	(ABC) transporter
Cp29156_RS00570	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Cp29156_RS00575	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Cp29156_RS00580	COG0803	Belongs to the bacterial solute-binding protein 9 family
Cp29156_RS00605	COG0604	alcohol dehydrogenase
Cp29156_RS00630	COG0471	metal ion transport
Cp29156_RS00640	COG1263	PTS System
Cp29156_RS00640	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
Cp29156_RS00645	COG2190	(PTS) system
Cp29156_RS00645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
Cp29156_RS00645	COG1263	PTS System
Cp29156_RS00670	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Cp29156_RS00685	COG0287	Prephenate dehydrogenase
Cp29156_RS00705	COG2409	Drug exporters of the RND superfamily
Cp29156_RS00710	COG0343	queuine tRNA-ribosyltransferase activity
Cp29156_RS00720	COG2610	gluconate transmembrane transporter activity
Cp29156_RS00725	COG3265	gluconokinase activity
Cp29156_RS00730	COG1063	alcohol dehydrogenase
Cp29156_RS00735	COG1028	Short-chain dehydrogenase reductase Sdr
Cp29156_RS00750	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Cp29156_RS00775	COG2610	gluconate transmembrane transporter activity
Cp29156_RS00780	COG2084	Dehydrogenase
Cp29156_RS00795	COG0179	Fumarylacetoacetate (FAA) hydrolase
Cp29156_RS00805	COG3442	glutamine amidotransferase
Cp29156_RS00810	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
Cp29156_RS00825	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Cp29156_RS00830	COG2390	Transcriptional regulator
Cp29156_RS00835	COG0813	purine-nucleoside phosphorylase activity
Cp29156_RS00850	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Cp29156_RS00875	COG0697	spore germination
Cp29156_RS00880	COG0527	aspartate kinase activity
Cp29156_RS00940	COG1840	ABC-type Fe3 transport system, periplasmic component
Cp29156_RS00955	COG3852	Histidine kinase
Cp29156_RS00985	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Cp29156_RS00985	COG2111	Na H antiporter
Cp29156_RS01035	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Cp29156_RS01060	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Cp29156_RS01080	COG0494	nUDIX hydrolase
Cp29156_RS01150	COG1111	helicase
Cp29156_RS01150	COG1205	dead DEAH box helicase
Cp29156_RS01160	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Cp29156_RS01160	COG1754	DNA topoisomerase type I activity
Cp29156_RS01165	COG1297	OPT oligopeptide transporter protein
Cp29156_RS01175	COG0470	DNA polymerase III
Cp29156_RS01190	COG0318	PFAM AMP-dependent synthetase and ligase
Cp29156_RS01200	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
Cp29156_RS01210	COG1088	dTDP-glucose 4,6-dehydratase activity
Cp29156_RS01220	COG1505	serine-type exopeptidase activity
Cp29156_RS01235	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Cp29156_RS01240	COG3800	Transcriptional regulator
Cp29156_RS01240	COG1396	sequence-specific DNA binding
Cp29156_RS01250	COG1053	succinate dehydrogenase
Cp29156_RS01255	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
Cp29156_RS01265	COG2733	membrane
Cp29156_RS01275	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
Cp29156_RS01295	COG1882	Formate acetyltransferase
Cp29156_RS01315	COG0318	PFAM AMP-dependent synthetase and ligase
Cp29156_RS01330	COG5002	protein histidine kinase activity
Cp29156_RS01335	COG0745	RESPONSE REGULATOR receiver
Cp29156_RS01355	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
Cp29156_RS01375	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Cp29156_RS01375	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Cp29156_RS01405	COG1648	precorrin-2 dehydrogenase activity
Cp29156_RS01405	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Cp29156_RS01420	COG2217	Heavy metal translocating P-type atpase
Cp29156_RS01445	COG0406	alpha-ribazole phosphatase activity
Cp29156_RS01455	COG0785	Cytochrome C biogenesis protein
Cp29156_RS01465	COG0275	rRNA processing
Cp29156_RS01480	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Cp29156_RS01485	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Cp29156_RS01520	COG4948	Mandelate Racemase Muconate Lactonizing
Cp29156_RS01535	COG0438	transferase activity, transferring glycosyl groups
Cp29156_RS01535	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Cp29156_RS01545	COG0039	L-malate dehydrogenase activity
Cp29156_RS01550	COG0644	oxidoreductase
Cp29156_RS01580	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Cp29156_RS01605	COG3579	cysteine-type endopeptidase activity
Cp29156_RS01610	COG1902	pentaerythritol trinitrate reductase activity
Cp29156_RS01630	COG0803	Belongs to the bacterial solute-binding protein 9 family
Cp29156_RS01640	COG1121	(ABC) transporter
Cp29156_RS01645	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Cp29156_RS01675	COG2197	response regulator
Cp29156_RS01700	COG0701	Predicted permease
Cp29156_RS01770	COG1302	Protein conserved in bacteria
Cp29156_RS01865	COG0814	amino acid
Cp29156_RS01870	COG1760	l-serine dehydratase
Cp29156_RS01875	COG0252	asparaginase activity
Cp29156_RS01880	COG0671	phosphoesterase, PA-phosphatase related
Cp29156_RS01925	COG1175	transmembrane transport
Cp29156_RS01930	COG3833	ABC-type maltose transport systems, permease component
Cp29156_RS01950	COG3842	ATPase activity
Cp29156_RS01955	COG0201	protein transport
Cp29156_RS02005	COG0203	ribosomal protein L17
Cp29156_RS02025	COG1404	Belongs to the peptidase S8 family
Cp29156_RS02035	COG1674	ftsk spoiiie
Cp29156_RS02090	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Cp29156_RS02160	COG0516	GMP reductase activity
Cp29156_RS02205	COG2011	ABC-type metal ion transport system permease component
Cp29156_RS02215	COG1464	Belongs to the NlpA lipoprotein family
Cp29156_RS02220	COG1464	Belongs to the NlpA lipoprotein family
Cp29156_RS02235	COG0803	Belongs to the bacterial solute-binding protein 9 family
Cp29156_RS02240	COG1121	(ABC) transporter
Cp29156_RS02250	COG1321	iron dependent repressor
Cp29156_RS02250	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Cp29156_RS02255	COG1321	iron dependent repressor
Cp29156_RS02260	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Cp29156_RS02265	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
Cp29156_RS02300	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Cp29156_RS02305	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
Cp29156_RS02320	COG2838	Isocitrate dehydrogenase
Cp29156_RS02325	COG2814	Major facilitator Superfamily
Cp29156_RS02345	COG0180	Tryptophanyl-tRNA synthetase
Cp29156_RS02350	COG1295	ribonuclease BN
Cp29156_RS02355	COG1686	Belongs to the peptidase S11 family
Cp29156_RS02390	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Cp29156_RS02395	COG1473	amidohydrolase
Cp29156_RS02395	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
Cp29156_RS02410	COG2814	Major facilitator Superfamily
Cp29156_RS02420	COG4770	biotin carboxylase activity
Cp29156_RS02425	COG2897	thiosulfate sulfurtransferase activity
Cp29156_RS02430	COG0189	ligase activity
Cp29156_RS02435	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Cp29156_RS02435	COG2755	lipolytic protein G-D-S-L family
Cp29156_RS02445	COG0424	maF-like protein
Cp29156_RS02450	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Cp29156_RS02455	COG1609	Transcriptional regulator
Cp29156_RS02465	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Cp29156_RS02470	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Cp29156_RS02475	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
Cp29156_RS02475	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
Cp29156_RS02525	COG1316	TRANSCRIPTIONal
Cp29156_RS02535	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Cp29156_RS02570	COG1482	cell wall glycoprotein biosynthetic process
Cp29156_RS02595	COG0745	RESPONSE REGULATOR receiver
Cp29156_RS02600	COG5002	protein histidine kinase activity
Cp29156_RS02615	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
Cp29156_RS02655	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Cp29156_RS02660	COG2135	peptidase activity
Cp29156_RS02665	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
Cp29156_RS02700	COG0513	Belongs to the DEAD box helicase family
Cp29156_RS02725	COG0210	DNA helicase
Cp29156_RS02735	COG2816	NAD+ diphosphatase activity
Cp29156_RS02760	COG3480	Lon protease (S16) C-terminal proteolytic domain
Cp29156_RS02885	COG0483	inositol monophosphate 1-phosphatase activity
Cp29156_RS02890	COG0483	inositol monophosphate 1-phosphatase activity
Cp29156_RS02905	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
Cp29156_RS02915	COG2884	Cell division ATP-binding protein ftsE
Cp29156_RS02920	COG2177	Part of the ABC transporter FtsEX involved in
Cp29156_RS02935	COG0288	reversible hydration of carbon dioxide
Cp29156_RS02980	COG0564	pseudouridine synthase activity
Cp29156_RS03005	COG0706	membrane insertase activity
Cp29156_RS03010	COG3764	Sortase (surface protein transpeptidase)
Cp29156_RS03025	COG2197	response regulator
Cp29156_RS03045	COG5650	phosphatidylinositol metabolic process
Cp29156_RS03065	COG2814	Major facilitator Superfamily
Cp29156_RS03070	COG0431	NADPH-dependent FMN reductase
Cp29156_RS03100	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
Cp29156_RS03130	COG1316	TRANSCRIPTIONal
Cp29156_RS03140	COG0154	amidase activity
Cp29156_RS03165	COG2188	Transcriptional regulator
Cp29156_RS03180	COG0561	phosphatase activity
Cp29156_RS03190	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
Cp29156_RS03195	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Cp29156_RS03210	COG2271	Major facilitator Superfamily
Cp29156_RS03215	COG0584	glycerophosphoryl diester phosphodiesterase
Cp29156_RS03225	COG0671	phosphoesterase, PA-phosphatase related
Cp29156_RS03235	COG1216	Glycosyl transferase, family 2
Cp29156_RS03240	COG0671	phosphoesterase, PA-phosphatase related
Cp29156_RS03245	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Cp29156_RS03250	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Cp29156_RS03265	COG5479	isomerase activity
Cp29156_RS03265	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
Cp29156_RS03280	COG0318	PFAM AMP-dependent synthetase and ligase
Cp29156_RS03285	COG3321	synthase
Cp29156_RS03285	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Cp29156_RS03290	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Cp29156_RS03335	COG0500	methyltransferase
Cp29156_RS03340	COG0438	transferase activity, transferring glycosyl groups
Cp29156_RS03350	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Cp29156_RS03350	COG2755	lipolytic protein G-D-S-L family
Cp29156_RS03355	COG4981	capsule polysaccharide biosynthetic process
Cp29156_RS03365	COG1472	Belongs to the glycosyl hydrolase 3 family
Cp29156_RS03375	COG1012	belongs to the aldehyde dehydrogenase family
Cp29156_RS03390	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
Cp29156_RS03410	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Cp29156_RS03410	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
Cp29156_RS03435	COG0831	urea catabolic process
Cp29156_RS03440	COG0832	Belongs to the urease beta subunit family
Cp29156_RS03445	COG0804	urea catabolic process
Cp29156_RS03450	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
Cp29156_RS03455	COG0830	nickel cation binding
Cp29156_RS03460	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
Cp29156_RS03465	COG0829	nickel cation binding
Cp29156_RS03475	COG4139	cobalamin transport
Cp29156_RS03480	COG1120	ATPase activity
Cp29156_RS03495	COG2181	nitrate reductase activity
Cp29156_RS03495	COG0247	lactate metabolic process
Cp29156_RS03515	COG0601	transmembrane transport
Cp29156_RS03550	COG0443	Heat shock 70 kDa protein
Cp29156_RS03565	COG0789	Transcriptional regulator
Cp29156_RS03605	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Cp29156_RS03610	COG1136	(ABC) transporter
Cp29156_RS03615	COG0577	efflux transmembrane transporter activity
Cp29156_RS03615	COG1136	(ABC) transporter
Cp29156_RS03625	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Cp29156_RS03655	COG1131	(ABC) transporter
Cp29156_RS03695	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
Cp29156_RS03710	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Cp29156_RS03725	COG0191	fructose-bisphosphate aldolase activity
Cp29156_RS03760	COG4129	membrane
Cp29156_RS03770	COG4129	membrane
Cp29156_RS03785	COG3005	denitrification pathway
Cp29156_RS03790	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
Cp29156_RS03800	COG1333	cytochrome c biogenesis protein
Cp29156_RS03805	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Cp29156_RS03835	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
Cp29156_RS03840	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
Cp29156_RS03860	COG0280	phosphate acetyltransferase
Cp29156_RS03875	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Cp29156_RS03900	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Cp29156_RS03910	COG0456	acetyltransferase
Cp29156_RS03915	COG0242	peptide deformylase activity
Cp29156_RS03935	COG1051	belongs to the nudix hydrolase family
Cp29156_RS03965	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Cp29156_RS03965	COG2111	Na H antiporter
Cp29156_RS03985	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Cp29156_RS04005	COG2326	polyphosphate kinase activity
Cp29156_RS04010	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Cp29156_RS04030	COG1301	dicarboxylic acid transport
Cp29156_RS04035	COG0425	Belongs to the sulfur carrier protein TusA family
Cp29156_RS04035	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Cp29156_RS04040	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Cp29156_RS04045	COG2027	D-alanyl-D-alanine carboxypeptidase
Cp29156_RS04060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Cp29156_RS04065	COG0302	gtp cyclohydrolase
Cp29156_RS04070	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Cp29156_RS04100	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
Cp29156_RS04105	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
Cp29156_RS04115	COG1012	belongs to the aldehyde dehydrogenase family
Cp29156_RS04120	COG1301	dicarboxylic acid transport
Cp29156_RS04135	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Cp29156_RS04150	COG1957	nucleoside hydrolase
Cp29156_RS04155	COG0477	Major facilitator Superfamily
Cp29156_RS04185	COG0288	reversible hydration of carbon dioxide
Cp29156_RS04195	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
Cp29156_RS04210	COG2847	Copper chaperone PCu(A)C
Cp29156_RS04215	COG1329	Transcriptional regulator
Cp29156_RS04235	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Cp29156_RS04245	COG1609	Transcriptional regulator
Cp29156_RS04290	COG0028	Belongs to the TPP enzyme family
Cp29156_RS04320	COG0745	RESPONSE REGULATOR receiver
Cp29156_RS04325	COG2205	protein histidine kinase activity
Cp29156_RS04335	COG0537	adenosine 5'-monophosphoramidase activity
Cp29156_RS04340	COG0151	Belongs to the GarS family
Cp29156_RS04345	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Cp29156_RS04350	COG0569	domain protein
Cp29156_RS04355	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Cp29156_RS04375	COG0386	Belongs to the glutathione peroxidase family
Cp29156_RS04380	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Cp29156_RS04385	COG0047	phosphoribosylformylglycinamidine synthase activity
Cp29156_RS04390	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Cp29156_RS04400	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Cp29156_RS04405	COG1780	Probably involved in ribonucleotide reductase function
Cp29156_RS04430	COG0354	folic acid binding
Cp29156_RS04445	COG1597	lipid kinase activity
Cp29156_RS04475	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Cp29156_RS04500	COG4988	ABC transporter
Cp29156_RS04505	COG4988	ABC transporter
Cp29156_RS04510	COG1294	oxidase, subunit
Cp29156_RS04515	COG1271	oxidase subunit
Cp29156_RS04535	COG0371	Dehydrogenase
Cp29156_RS04555	COG1045	serine acetyltransferase
Cp29156_RS04570	COG2197	response regulator
Cp29156_RS04610	COG0647	UMP catabolic process
Cp29156_RS04645	COG4974	Belongs to the 'phage' integrase family
Cp29156_RS04665	COG3104	oligopeptide transport
Cp29156_RS04670	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
Cp29156_RS04680	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Cp29156_RS04695	COG1160	GTP binding
Cp29156_RS04700	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
Cp29156_RS04705	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Cp29156_RS04710	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
Cp29156_RS04715	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
Cp29156_RS04720	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
Cp29156_RS04725	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Cp29156_RS04730	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Cp29156_RS04735	COG1120	ATPase activity
Cp29156_RS04740	COG4264	IucA IucC family
Cp29156_RS04750	COG3547	Transposase (IS116 IS110 IS902 family)
Cp29156_RS04775	COG3012	SEC-C Motif Domain Protein
Cp29156_RS04785	COG0653	protein targeting
Cp29156_RS04825	COG1253	flavin adenine dinucleotide binding
Cp29156_RS04830	COG0513	Belongs to the DEAD box helicase family
Cp29156_RS04835	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
Cp29156_RS04845	COG0598	Magnesium transport protein CorA
Cp29156_RS04865	COG0477	Major facilitator Superfamily
Cp29156_RS04890	COG0463	Glycosyl transferase, family 2
Cp29156_RS04940	COG0300	oxidoreductase activity
Cp29156_RS04955	COG0805	protein transport
Cp29156_RS04965	COG2378	regulation of single-species biofilm formation
Cp29156_RS04985	COG4122	O-methyltransferase activity
Cp29156_RS05000	COG1362	aminopeptidase activity
Cp29156_RS05020	COG1027	Aspartate ammonia-lyase
Cp29156_RS05025	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
Cp29156_RS05045	COG1410	methionine synthase
Cp29156_RS05045	COG0646	methionine synthase
Cp29156_RS05065	COG0667	Aldo Keto reductase
Cp29156_RS05075	COG0167	dihydroorotate dehydrogenase activity
Cp29156_RS05100	COG1461	Dihydroxyacetone kinase
Cp29156_RS05105	COG2376	Dihydroxyacetone kinase
Cp29156_RS05115	COG3842	ATPase activity
Cp29156_RS05185	COG3883	PFAM NLP P60 protein
Cp29156_RS05185	COG0791	NLP P60 protein
Cp29156_RS05215	COG2848	UPF0210 protein
Cp29156_RS05240	COG2151	metal-sulfur cluster biosynthetic enzyme
Cp29156_RS05245	COG0822	iron-sulfur transferase activity
Cp29156_RS05255	COG0396	ATPase activity
Cp29156_RS05300	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Cp29156_RS05305	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
Cp29156_RS05325	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Cp29156_RS05345	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Cp29156_RS05355	COG0391	Required for morphogenesis under gluconeogenic growth conditions
Cp29156_RS05365	COG0322	excinuclease ABC activity
Cp29156_RS05395	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Cp29156_RS05410	COG0242	peptide deformylase activity
Cp29156_RS05450	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Cp29156_RS05460	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Cp29156_RS05475	COG1090	epimerase
Cp29156_RS05500	COG0006	proline dipeptidase activity
Cp29156_RS05505	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
Cp29156_RS05510	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
Cp29156_RS05515	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
Cp29156_RS05520	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
Cp29156_RS05540	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
Cp29156_RS05595	COG1760	l-serine dehydratase
Cp29156_RS05620	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Cp29156_RS05625	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
Cp29156_RS05640	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Cp29156_RS05655	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Cp29156_RS05660	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Cp29156_RS05690	COG1946	Acyl-CoA thioesterase
Cp29156_RS05705	COG0156	8-amino-7-oxononanoate synthase activity
Cp29156_RS05720	COG1560	Kdo2-lipid A biosynthetic process
Cp29156_RS05725	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Cp29156_RS05740	COG2837	iron assimilation
Cp29156_RS05795	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Cp29156_RS05885	COG2890	protein-(glutamine-N5) methyltransferase activity
Cp29156_RS05925	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Cp29156_RS05930	COG0450	alkyl hydroperoxide reductase
Cp29156_RS05945	COG1643	Atp-dependent helicase
Cp29156_RS05965	COG1349	DNA-binding transcription factor activity
Cp29156_RS05970	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Cp29156_RS05975	COG1349	DNA-binding transcription factor activity
Cp29156_RS05980	COG1105	Belongs to the carbohydrate kinase PfkB family
Cp29156_RS05995	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
Cp29156_RS06000	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Cp29156_RS06010	COG2233	PERMEase
Cp29156_RS06015	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Cp29156_RS06030	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
Cp29156_RS06045	COG1196	nuclear chromosome segregation
Cp29156_RS06065	COG2137	regulation of response to DNA damage stimulus
Cp29156_RS06070	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
Cp29156_RS06080	COG1268	BioY protein
Cp29156_RS06085	COG1122	ATPase activity
Cp29156_RS06100	COG1396	sequence-specific DNA binding
Cp29156_RS06125	COG1674	ftsk spoiiie
Cp29156_RS06135	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
Cp29156_RS06175	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Cp29156_RS06190	COG0534	Mate efflux family protein
Cp29156_RS06235	COG3022	response to hydroperoxide
Cp29156_RS06240	COG1648	precorrin-2 dehydrogenase activity
Cp29156_RS06240	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Cp29156_RS06245	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
Cp29156_RS06250	COG0523	cobalamin synthesis protein
Cp29156_RS06255	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Cp29156_RS06255	COG2169	Transcriptional regulator
Cp29156_RS06320	COG0750	zinc metalloprotease
Cp29156_RS06375	COG4974	Belongs to the 'phage' integrase family
Cp29156_RS06400	COG0681	Belongs to the peptidase S26 family
Cp29156_RS06415	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
Cp29156_RS06415	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Cp29156_RS06415	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Cp29156_RS06425	COG0336	Belongs to the RNA methyltransferase TrmD family
Cp29156_RS06430	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Cp29156_RS06450	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
Cp29156_RS06480	COG1115	amino acid carrier protein
Cp29156_RS06485	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Cp29156_RS06510	COG0686	Belongs to the AlaDH PNT family
Cp29156_RS06515	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Cp29156_RS06520	COG1929	Belongs to the glycerate kinase type-1 family
Cp29156_RS06535	COG1473	amidohydrolase
Cp29156_RS06545	COG0058	SHG alpha-glucan phosphorylase activity
Cp29156_RS06555	COG0469	pyruvate kinase activity
Cp29156_RS06565	COG0134	indole-3-glycerol-phosphate synthase activity
Cp29156_RS06585	COG0483	inositol monophosphate 1-phosphatase activity
Cp29156_RS06650	COG2176	DNA-directed DNA polymerase activity
Cp29156_RS06675	COG1739	Uncharacterized protein family UPF0029
Cp29156_RS06680	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Cp29156_RS06705	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
Cp29156_RS06720	COG0252	asparaginase activity
Cp29156_RS06740	COG3599	regulation of cell shape
Cp29156_RS06750	COG1799	cell septum assembly
Cp29156_RS06760	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Cp29156_RS06770	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Cp29156_RS06800	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Cp29156_RS06805	COG0768	penicillin binding
Cp29156_RS06865	COG2815	serine threonine protein kinase
Cp29156_RS06865	COG0515	serine threonine protein kinase
Cp29156_RS06870	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
Cp29156_RS06890	COG1940	carbohydrate kinase activity
Cp29156_RS06895	COG0438	transferase activity, transferring glycosyl groups
Cp29156_RS06905	COG0791	NLP P60 protein
Cp29156_RS06955	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
Cp29156_RS06960	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
Cp29156_RS06970	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Cp29156_RS06985	COG0508	dehydrogenase complex catalyzes the overall conversion of
Cp29156_RS06990	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Cp29156_RS06990	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Cp29156_RS06995	COG0404	The glycine cleavage system catalyzes the degradation of glycine
Cp29156_RS07000	COG0509	glycine decarboxylation via glycine cleavage system
Cp29156_RS07030	COG0174	glutamine synthetase
Cp29156_RS07175	COG2056	Na+-H+ antiporter family
Cp29156_RS07185	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Cp29156_RS07210	COG0174	glutamine synthetase
Cp29156_RS07235	COG0557	exoribonuclease II activity
Cp29156_RS07255	COG3323	Protein of unknown function (DUF1653)
Cp29156_RS07255	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Cp29156_RS07295	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
Cp29156_RS07300	COG0596	Alpha beta hydrolase
Cp29156_RS07325	COG2860	membrane
Cp29156_RS07395	COG0423	glycine-tRNA ligase activity
Cp29156_RS07425	COG1381	Involved in DNA repair and RecF pathway recombination
Cp29156_RS07480	COG1022	Amp-dependent synthetase and ligase
Cp29156_RS07530	COG1114	Component of the transport system for branched-chain amino acids
Cp29156_RS07535	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Cp29156_RS07545	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Cp29156_RS07560	COG0747	negative chemotaxis
Cp29156_RS07565	COG0601	transmembrane transport
Cp29156_RS07570	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Cp29156_RS07575	COG4172	Belongs to the ABC transporter superfamily
Cp29156_RS07585	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
Cp29156_RS07590	COG2391	methyltransferase activity
Cp29156_RS07600	COG4171	peptide transport system, permease
Cp29156_RS07620	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Cp29156_RS07625	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Cp29156_RS07650	COG1280	lysine exporter protein (LysE YggA)
Cp29156_RS07675	COG1307	EDD domain protein, DegV family
Cp29156_RS07680	COG0406	alpha-ribazole phosphatase activity
Cp29156_RS07690	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
Cp29156_RS07705	COG2832	Protein of unknown function (DUF454)
Cp29156_RS07710	COG0569	domain protein
Cp29156_RS07710	COG2985	domain, Protein
Cp29156_RS07735	COG1530	ribonuclease E activity
Cp29156_RS07750	COG2423	ornithine cyclodeaminase activity
Cp29156_RS07760	COG0285	dihydrofolate synthase activity
Cp29156_RS07800	COG0544	peptidyl-prolyl cis-trans isomerase activity
Cp29156_RS07835	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
Cp29156_RS07845	COG0668	transmembrane transport
Cp29156_RS07925	COG1131	(ABC) transporter
Cp29156_RS07930	COG3336	cytochrome c oxidase
Cp29156_RS07935	COG1966	Carbon starvation protein
Cp29156_RS07955	COG0604	alcohol dehydrogenase
Cp29156_RS07960	COG4221	oxidoreductase activity
Cp29156_RS07980	COG1376	ErfK ybiS ycfS ynhG family protein
Cp29156_RS07990	COG2130	NADP-dependent
Cp29156_RS07995	COG1335	isochorismatase
Cp29156_RS08040	COG2197	response regulator
Cp29156_RS08090	COG1234	tRNA 3'-trailer cleavage
Cp29156_RS08115	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
Cp29156_RS08160	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Cp29156_RS08170	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Cp29156_RS08190	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Cp29156_RS08255	COG0033	Phosphoglucomutase
Cp29156_RS08270	COG0577	efflux transmembrane transporter activity
Cp29156_RS08270	COG1136	(ABC) transporter
Cp29156_RS08275	COG1136	(ABC) transporter
Cp29156_RS08275	COG0577	efflux transmembrane transporter activity
Cp29156_RS08305	COG2835	tetraacyldisaccharide 4'-kinase activity
Cp29156_RS08310	COG0165	Argininosuccinate lyase
Cp29156_RS08330	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Cp29156_RS08345	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
Cp29156_RS08360	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Cp29156_RS08375	COG0291	Belongs to the bacterial ribosomal protein bL35 family
Cp29156_RS08390	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Cp29156_RS08420	COG0237	dephospho-CoA kinase activity
Cp29156_RS08430	COG0539	negative regulation of cytoplasmic translation
Cp29156_RS08435	COG2226	methyltransferase
Cp29156_RS08460	COG0765	amino acid transport
Cp29156_RS08485	COG0742	ribosomal rna small subunit methyltransferase
Cp29156_RS08490	COG0511	ligase activity, forming carbon-carbon bonds
Cp29156_RS08500	COG1461	Dihydroxyacetone kinase
Cp29156_RS08505	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
Cp29156_RS08510	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Cp29156_RS08595	COG0179	Fumarylacetoacetate (FAA) hydrolase
Cp29156_RS08615	COG0473	3-isopropylmalate dehydrogenase activity
Cp29156_RS08655	COG0668	transmembrane transport
Cp29156_RS08680	COG0583	DNA-binding transcription factor activity
Cp29156_RS08690	COG0667	Aldo Keto reductase
Cp29156_RS08700	COG0205	6-phosphofructokinase activity
Cp29156_RS08710	COG1120	ATPase activity
Cp29156_RS08715	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Cp29156_RS08780	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
Cp29156_RS08800	COG1119	ATPase activity
Cp29156_RS08825	COG0346	lactoylglutathione lyase activity
Cp29156_RS08870	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
Cp29156_RS08875	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Cp29156_RS08880	COG0356	it plays a direct role in the translocation of protons across the membrane
Cp29156_RS08930	COG0460	homoserine dehydrogenase
Cp29156_RS08935	COG0019	diaminopimelate decarboxylase activity
Cp29156_RS08945	COG1620	l-lactate permease
Cp29156_RS08950	COG0247	lactate metabolic process
Cp29156_RS08955	COG1139	Iron-sulfur cluster binding protein
Cp29156_RS08960	COG1556	Lactate utilization protein
Cp29156_RS08990	COG1846	Transcriptional regulator
Cp29156_RS09015	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Cp29156_RS09020	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Cp29156_RS09050	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
Cp29156_RS09070	COG2017	converts alpha-aldose to the beta-anomer
Cp29156_RS09090	COG2272	Belongs to the type-B carboxylesterase lipase family
Cp29156_RS09095	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Cp29156_RS09105	COG1132	(ABC) transporter
Cp29156_RS09110	COG0508	dehydrogenase complex catalyzes the overall conversion of
Cp29156_RS09110	COG0567	Dehydrogenase, E1 component
Cp29156_RS09120	COG2239	Acts as a magnesium transporter
Cp29156_RS09150	COG4122	O-methyltransferase activity
Cp29156_RS09160	COG0297	glycogen (starch) synthase activity
Cp29156_RS09165	COG3527	Alpha-acetolactate decarboxylase
Cp29156_RS09190	COG0463	Glycosyl transferase, family 2
Cp29156_RS09195	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Cp29156_RS09200	COG1611	Belongs to the LOG family
Cp29156_RS09205	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Cp29156_RS09215	COG1113	amino acid transport
Cp29156_RS09225	COG1113	amino acid transport
Cp29156_RS09260	COG4166	transmembrane transport
Cp29156_RS09300	COG0601	transmembrane transport
Cp29156_RS09305	COG4166	transmembrane transport
Cp29156_RS09315	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
Cp29156_RS09325	COG1122	ATPase activity
Cp29156_RS09330	COG4721	ABC-type cobalt transport system, permease component
Cp29156_RS09340	COG2354	Protein conserved in bacteria
Cp29156_RS09345	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
Cp29156_RS09355	COG1132	(ABC) transporter
Cp29156_RS09360	COG2824	Alkylphosphonate utilization operon protein PhnA
Cp29156_RS09375	COG0012	GTP binding
Cp29156_RS09410	COG1494	fructose-1,6-bisphosphatase
Cp29156_RS09415	COG0114	fumarate hydratase activity
Cp29156_RS09485	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
Cp29156_RS09545	COG3956	TIGRFAM MazG family protein
Cp29156_RS09550	COG0531	amino acid
Cp29156_RS09560	COG1309	transcriptional regulator
Cp29156_RS09570	COG2132	Multicopper oxidase
Cp29156_RS09575	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
Cp29156_RS09580	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Cp29156_RS09585	COG1523	belongs to the glycosyl hydrolase 13 family
Cp29156_RS09605	COG2070	2-Nitropropane dioxygenase
Cp29156_RS09610	COG0193	aminoacyl-tRNA hydrolase activity
Cp29156_RS09620	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
Cp29156_RS09625	COG0596	Alpha beta hydrolase
Cp29156_RS09665	COG2326	polyphosphate kinase activity
Cp29156_RS09680	COG0488	(ABC) transporter
Cp29156_RS09695	COG3583	domain protein
Cp29156_RS09700	COG0084	hydrolase, TatD family'
Cp29156_RS09715	COG3949	Membrane
Cp29156_RS09720	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Cp29156_RS09730	COG1928	C-terminal four TMM region of protein-O-mannosyltransferase
Cp29156_RS09740	COG2259	Doxx family
Cp29156_RS09760	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Cp29156_RS09785	COG0315	cyclic pyranopterin monophosphate synthase activity
Cp29156_RS09785	COG0521	Mo-molybdopterin cofactor biosynthetic process
Cp29156_RS09790	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Cp29156_RS09795	COG2205	protein histidine kinase activity
Cp29156_RS09800	COG0745	RESPONSE REGULATOR receiver
Cp29156_RS09810	COG0254	rRNA binding
Cp29156_RS09850	COG0765	amino acid transport
Cp29156_RS09855	COG0765	amino acid transport
Cp29156_RS09860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Cp29156_RS09865	COG1126	abc transporter atp-binding protein
Cp29156_RS09915	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Cp29156_RS09925	COG1201	RNA secondary structure unwinding
Cp29156_RS09930	COG1218	3'(2'),5'-bisphosphate nucleotidase
Cp29156_RS09945	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
Cp29156_RS09970	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Cp29156_RS09985	COG4166	transmembrane transport
Cp29156_RS10000	COG0019	diaminopimelate decarboxylase activity
Cp29156_RS10005	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Cp29156_RS10010	COG0534	Mate efflux family protein
Cp29156_RS10025	COG3757	hydrolase, family 25
Cp29156_RS10035	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Cp29156_RS10045	COG1024	Enoyl-CoA hydratase
Cp29156_RS10050	COG0656	L-ascorbic acid biosynthetic process
Cp29156_RS10065	COG0545	Peptidyl-prolyl cis-trans isomerase
Cp29156_RS10070	COG0372	Belongs to the citrate synthase family
Cp29156_RS10090	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Cp29156_RS10095	COG2252	PERMEase
Cp29156_RS10120	COG1652	LysM domain
Cp29156_RS10130	COG1061	Type III restriction enzyme res subunit
Cp29156_RS10170	COG1131	(ABC) transporter
Cp29156_RS10190	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Cp29156_RS10205	COG0477	Major facilitator Superfamily
Cp29156_RS10210	COG0305	Participates in initiation and elongation during chromosome replication
Cp29156_RS10215	COG3387	PFAM Glycoside hydrolase 15-related
Cp29156_RS10230	COG0629	single-stranded DNA binding
Cp29156_RS10255	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Cp29156_RS10275	COG0300	oxidoreductase activity
Cp29156_RS10290	COG0586	Pfam SNARE associated Golgi protein
Cp29156_RS10295	COG0783	Belongs to the Dps family
Cp29156_RS10300	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Cp29156_RS10305	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Cp29156_RS10305	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Cp29156_RS10315	COG1511	domain protein
Cp29156_RS10325	COG1136	(ABC) transporter
Cp29156_RS10325	COG0577	efflux transmembrane transporter activity
Cp29156_RS10345	COG4585	Histidine kinase
Cp29156_RS10350	COG2197	response regulator
Cp29156_RS10365	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
Cp29156_RS10380	COG2186	Transcriptional regulator
Cp29156_RS10385	COG0747	negative chemotaxis
Cp29156_RS10390	COG0601	transmembrane transport
Cp29156_RS10395	COG0444	Belongs to the ABC transporter superfamily
Cp29156_RS10400	COG4608	Belongs to the ABC transporter superfamily
Cp29156_RS10405	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Cp29156_RS10445	COG3422	double-strand break repair
Cp29156_RS10460	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
Cp29156_RS10480	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
Cp29156_RS10485	COG0512	Glutamine amidotransferase of anthranilate synthase
Cp29156_RS10495	COG0135	phosphoribosylanthranilate isomerase activity
Cp29156_RS10495	COG0134	indole-3-glycerol-phosphate synthase activity
Cp29156_RS10525	COG1687	branched-chain amino acid
Cp29156_RS10530	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
Cp29156_RS10535	COG1678	Uncharacterized ACR, COG1678
Cp29156_RS10540	COG0617	tRNA 3'-terminal CCA addition
Cp29156_RS10575	COG0860	N-Acetylmuramoyl-L-alanine amidase
Cp29156_RS10575	COG3409	Peptidoglycan-binding domain 1 protein
Cp29156_RS10590	COG1192	Involved in chromosome partitioning
Cp29156_RS10605	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
Cp29156_RS10615	COG0230	Belongs to the bacterial ribosomal protein bL34 family