locus-tag class description CPFRC_RS00005 PF00308 Bacterial dnaA protein CPFRC_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CPFRC_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain CPFRC_RS00015 PF02767 DNA polymerase III beta subunit, central domain CPFRC_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain CPFRC_RS00020 PF02463 RecF/RecN/SMC N terminal domain CPFRC_RS00025 PF05258 Dna[CI] antecedent, DciA CPFRC_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus CPFRC_RS00030 PF01751 Toprim domain CPFRC_RS00030 PF00204 DNA gyrase B CPFRC_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPFRC_RS00050 PF00521 DNA gyrase/topoisomerase IV, subunit A CPFRC_RS00050 PF03989 DNA gyrase C-terminal domain, beta-propeller CPFRC_RS00095 PF02653 Branched-chain amino acid transport system / permease component CPFRC_RS00100 PF00005 ABC transporter CPFRC_RS00110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPFRC_RS00140 PF00005 ABC transporter CPFRC_RS00145 PF01032 FecCD transport family CPFRC_RS00150 PF01032 FecCD transport family CPFRC_RS00155 PF01497 Periplasmic binding protein CPFRC_RS00160 PF06781 Cell division protein CrgA CPFRC_RS00165 PF00069 Protein kinase domain CPFRC_RS00165 PF03793 PASTA domain CPFRC_RS00170 PF00069 Protein kinase domain CPFRC_RS00175 PF00905 Penicillin binding protein transpeptidase domain CPFRC_RS00180 PF01098 Cell cycle protein CPFRC_RS00195 PF12401 Protein of unknown function (DUF2662) CPFRC_RS00195 PF12401 Protein of unknown function (DUF2662) CPFRC_RS00195 PF00498 FHA domain CPFRC_RS00195 PF00498 FHA domain CPFRC_RS00225 PF00005 ABC transporter CPFRC_RS00230 PF01032 FecCD transport family CPFRC_RS00235 PF03448 MgtE intracellular N domain CPFRC_RS00235 PF01769 Divalent cation transporter CPFRC_RS00235 PF00571 CBS domain CPFRC_RS00240 PF00128 Alpha amylase, catalytic domain CPFRC_RS00240 PF16657 Maltogenic Amylase, C-terminal domain CPFRC_RS00265 PF04542 Sigma-70 region 2 CPFRC_RS00265 PF04545 Sigma-70, region 4 CPFRC_RS00275 PF00578 AhpC/TSA family CPFRC_RS00275 PF17991 Thioredoxin like C-terminal domain CPFRC_RS00275 PF02683 Cytochrome C biogenesis protein transmembrane region CPFRC_RS00285 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS00290 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS00295 PF00571 CBS domain CPFRC_RS00295 PF00005 ABC transporter CPFRC_RS00300 PF14013 MT0933-like antitoxin protein CPFRC_RS00305 PF01546 Peptidase family M20/M25/M40 CPFRC_RS00305 PF07687 Peptidase dimerisation domain CPFRC_RS00310 PF06968 Biotin and Thiamin Synthesis associated domain CPFRC_RS00310 PF04055 Radical SAM superfamily CPFRC_RS00325 PF01048 Phosphorylase superfamily CPFRC_RS00325 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CPFRC_RS00335 PF01183 Glycosyl hydrolases family 25 CPFRC_RS00335 PF01471 Putative peptidoglycan binding domain CPFRC_RS00340 PF01658 Myo-inositol-1-phosphate synthase CPFRC_RS00360 PF00132 Bacterial transferase hexapeptide (six repeats) CPFRC_RS00375 PF03641 Possible lysine decarboxylase CPFRC_RS00385 PF01047 MarR family CPFRC_RS00400 PF05145 Transition state regulatory protein AbrB CPFRC_RS00410 PF01925 Sulfite exporter TauE/SafE CPFRC_RS00415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPFRC_RS00425 PF08482 ATP-dependent helicase C-terminal CPFRC_RS00425 PF00271 Helicase conserved C-terminal domain CPFRC_RS00425 PF04408 Helicase associated domain (HA2) CPFRC_RS00425 PF00270 DEAD/DEAH box helicase CPFRC_RS00430 PF13532 2OG-Fe(II) oxygenase superfamily CPFRC_RS00435 PF13302 Acetyltransferase (GNAT) domain CPFRC_RS00435 PF00117 Glutamine amidotransferase class-I CPFRC_RS00435 PF00958 GMP synthase C terminal domain CPFRC_RS00435 PF13673 Acetyltransferase (GNAT) domain CPFRC_RS00435 PF03352 Methyladenine glycosylase CPFRC_RS00440 PF00106 short chain dehydrogenase CPFRC_RS00445 PF01906 Putative heavy-metal-binding CPFRC_RS00475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPFRC_RS00475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPFRC_RS00480 PF00230 Major intrinsic protein CPFRC_RS00490 PF01431 Peptidase family M13 CPFRC_RS00490 PF05649 Peptidase family M13 CPFRC_RS00510 PF17689 Arabinosyltransferase concanavalin like domain CPFRC_RS00510 PF14896 EmbC C-terminal domain CPFRC_RS00510 PF04602 Mycobacterial cell wall arabinan synthesis protein CPFRC_RS00515 PF12249 Arabinofuranosyltransferase A C terminal CPFRC_RS00515 PF12250 Arabinofuranosyltransferase N terminal CPFRC_RS00520 PF00106 short chain dehydrogenase CPFRC_RS00525 PF04030 D-arabinono-1,4-lactone oxidase CPFRC_RS00525 PF01565 FAD binding domain CPFRC_RS00550 PF04138 GtrA-like protein CPFRC_RS00565 PF00005 ABC transporter CPFRC_RS00570 PF00950 ABC 3 transport family CPFRC_RS00575 PF00950 ABC 3 transport family CPFRC_RS00580 PF01297 Zinc-uptake complex component A periplasmic CPFRC_RS00590 PF00005 ABC transporter CPFRC_RS00595 PF01061 ABC-2 type transporter CPFRC_RS00600 PF00266 Aminotransferase class-V CPFRC_RS00605 PF00107 Zinc-binding dehydrogenase CPFRC_RS00605 PF08240 Alcohol dehydrogenase GroES-like domain CPFRC_RS00615 PF00155 Aminotransferase class I and II CPFRC_RS00630 PF00939 Sodium:sulfate symporter transmembrane region CPFRC_RS00635 PF00874 PRD domain CPFRC_RS00635 PF03123 CAT RNA binding domain CPFRC_RS00640 PF00367 phosphotransferase system, EIIB CPFRC_RS00640 PF02378 Phosphotransferase system, EIIC CPFRC_RS00645 PF02378 Phosphotransferase system, EIIC CPFRC_RS00645 PF00367 phosphotransferase system, EIIB CPFRC_RS00645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPFRC_RS00655 PF00115 Cytochrome C and Quinol oxidase polypeptide I CPFRC_RS00670 PF00392 Bacterial regulatory proteins, gntR family CPFRC_RS00675 PF01680 SOR/SNZ family CPFRC_RS00680 PF01174 SNO glutamine amidotransferase family CPFRC_RS00685 PF02153 Prephenate dehydrogenase CPFRC_RS00695 PF14437 MafB19-like deaminase CPFRC_RS00705 PF03176 MMPL family CPFRC_RS00710 PF01702 Queuine tRNA-ribosyltransferase CPFRC_RS00715 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPFRC_RS00720 PF02447 GntP family permease CPFRC_RS00725 PF01202 Shikimate kinase CPFRC_RS00730 PF00107 Zinc-binding dehydrogenase CPFRC_RS00730 PF08240 Alcohol dehydrogenase GroES-like domain CPFRC_RS00750 PF12897 Alanine-glyoxylate amino-transferase CPFRC_RS00760 PF12169 DNA polymerase III subunits gamma and tau domain III CPFRC_RS00765 PF02575 YbaB/EbfC DNA-binding family CPFRC_RS00770 PF02132 RecR protein CPFRC_RS00770 PF13662 Toprim domain CPFRC_RS00775 PF02447 GntP family permease CPFRC_RS00780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPFRC_RS00780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CPFRC_RS00790 PF07729 FCD domain CPFRC_RS00790 PF00392 Bacterial regulatory proteins, gntR family CPFRC_RS00795 PF01557 Fumarylacetoacetate (FAA) hydrolase family CPFRC_RS00805 PF07685 CobB/CobQ-like glutamine amidotransferase domain CPFRC_RS00810 PF02875 Mur ligase family, glutamate ligase domain CPFRC_RS00810 PF08245 Mur ligase middle domain CPFRC_RS00825 PF00682 HMGL-like CPFRC_RS00825 PF08502 LeuA allosteric (dimerisation) domain CPFRC_RS00830 PF04198 Putative sugar-binding domain CPFRC_RS00835 PF01048 Phosphorylase superfamily CPFRC_RS00840 PF07690 Major Facilitator Superfamily CPFRC_RS00845 PF01791 DeoC/LacD family aldolase CPFRC_RS00850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPFRC_RS00850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPFRC_RS00850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPFRC_RS00850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPFRC_RS00855 PF08341 Thioester domain CPFRC_RS00855 PF17802 Prealbumin-like fold domain CPFRC_RS00860 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CPFRC_RS00860 PF04650 YSIRK type signal peptide CPFRC_RS00860 PF17210 SdrD B-like domain CPFRC_RS00860 PF00746 LPXTG cell wall anchor motif CPFRC_RS00860 PF17961 Bacterial Ig domain CPFRC_RS00865 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CPFRC_RS00865 PF00746 LPXTG cell wall anchor motif CPFRC_RS00865 PF04650 YSIRK type signal peptide CPFRC_RS00865 PF17961 Bacterial Ig domain CPFRC_RS00865 PF17210 SdrD B-like domain CPFRC_RS00880 PF00696 Amino acid kinase family CPFRC_RS00880 PF13840 ACT domain CPFRC_RS00880 PF01842 ACT domain CPFRC_RS00885 PF04650 YSIRK type signal peptide CPFRC_RS00885 PF17210 SdrD B-like domain CPFRC_RS00885 PF17961 Bacterial Ig domain CPFRC_RS00885 PF00746 LPXTG cell wall anchor motif CPFRC_RS00885 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CPFRC_RS00890 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPFRC_RS00890 PF02774 Semialdehyde dehydrogenase, dimerisation domain CPFRC_RS00895 PF08281 Sigma-70, region 4 CPFRC_RS00895 PF04542 Sigma-70 region 2 CPFRC_RS00900 PF06628 Catalase-related immune-responsive CPFRC_RS00900 PF00199 Catalase CPFRC_RS00930 PF17845 FbpC C-terminal regulatory nucleotide binding domain CPFRC_RS00930 PF00005 ABC transporter CPFRC_RS00945 PF07690 Major Facilitator Superfamily CPFRC_RS00950 PF00072 Response regulator receiver domain CPFRC_RS00950 PF00486 Transcriptional regulatory protein, C terminal CPFRC_RS00955 PF00989 PAS fold CPFRC_RS00955 PF00512 His Kinase A (phospho-acceptor) domain CPFRC_RS00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPFRC_RS00980 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CPFRC_RS00985 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CPFRC_RS00985 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CPFRC_RS00985 PF00361 Proton-conducting membrane transporter CPFRC_RS00985 PF13244 Domain of unknown function (DUF4040) CPFRC_RS00995 PF13810 Domain of unknown function (DUF4185) CPFRC_RS01005 PF13732 Domain of unknown function (DUF4162) CPFRC_RS01005 PF00005 ABC transporter CPFRC_RS01035 PF00912 Transglycosylase CPFRC_RS01035 PF00905 Penicillin binding protein transpeptidase domain CPFRC_RS01040 PF02467 Transcription factor WhiB CPFRC_RS01060 PF13545 Crp-like helix-turn-helix domain CPFRC_RS01060 PF00027 Cyclic nucleotide-binding domain CPFRC_RS01070 PF10576 Iron-sulfur binding domain of endonuclease III CPFRC_RS01070 PF00633 Helix-hairpin-helix motif CPFRC_RS01070 PF00730 HhH-GPD superfamily base excision DNA repair protein CPFRC_RS01080 PF00293 NUDIX domain CPFRC_RS01085 PF02674 Colicin V production protein CPFRC_RS01120 PF00437 Type II/IV secretion system protein CPFRC_RS01150 PF00270 DEAD/DEAH box helicase CPFRC_RS01150 PF00271 Helicase conserved C-terminal domain CPFRC_RS01150 PF09369 Domain of unknown function (DUF1998) CPFRC_RS01155 PF00313 'Cold-shock' DNA-binding domain CPFRC_RS01160 PF13368 Topoisomerase C-terminal repeat CPFRC_RS01160 PF01751 Toprim domain CPFRC_RS01160 PF01131 DNA topoisomerase CPFRC_RS01165 PF03169 OPT oligopeptide transporter protein CPFRC_RS01170 PF00672 HAMP domain CPFRC_RS01170 PF00211 Adenylate and Guanylate cyclase catalytic domain CPFRC_RS01175 PF09115 DNA polymerase III, delta subunit, C terminal CPFRC_RS01190 PF00501 AMP-binding enzyme CPFRC_RS01190 PF13193 AMP-binding enzyme C-terminal domain CPFRC_RS01200 PF00483 Nucleotidyl transferase CPFRC_RS01205 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CPFRC_RS01210 PF16363 GDP-mannose 4,6 dehydratase CPFRC_RS01220 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CPFRC_RS01220 PF00326 Prolyl oligopeptidase family CPFRC_RS01235 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPFRC_RS01235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPFRC_RS01240 PF01381 Helix-turn-helix CPFRC_RS01240 PF06114 IrrE N-terminal-like domain CPFRC_RS01240 PF09856 Predicted transcriptional regulator (DUF2083) CPFRC_RS01250 PF00890 FAD binding domain CPFRC_RS01250 PF02910 Fumarate reductase flavoprotein C-term CPFRC_RS01255 PF13183 4Fe-4S dicluster domain CPFRC_RS01255 PF13085 2Fe-2S iron-sulfur cluster binding domain CPFRC_RS01265 PF04286 Protein of unknown function (DUF445) CPFRC_RS01275 PF01791 DeoC/LacD family aldolase CPFRC_RS01285 PF04055 Radical SAM superfamily CPFRC_RS01290 PF02901 Pyruvate formate lyase-like CPFRC_RS01290 PF01228 Glycine radical CPFRC_RS01295 PF01228 Glycine radical CPFRC_RS01295 PF02901 Pyruvate formate lyase-like CPFRC_RS01310 PF01565 FAD binding domain CPFRC_RS01310 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CPFRC_RS01315 PF00501 AMP-binding enzyme CPFRC_RS01315 PF13193 AMP-binding enzyme C-terminal domain CPFRC_RS01320 PF13439 Glycosyltransferase Family 4 CPFRC_RS01320 PF00534 Glycosyl transferases group 1 CPFRC_RS01325 PF00300 Histidine phosphatase superfamily (branch 1) CPFRC_RS01330 PF00512 His Kinase A (phospho-acceptor) domain CPFRC_RS01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPFRC_RS01335 PF00486 Transcriptional regulatory protein, C terminal CPFRC_RS01335 PF00072 Response regulator receiver domain CPFRC_RS01345 PF02541 Ppx/GppA phosphatase family CPFRC_RS01355 PF14748 Pyrroline-5-carboxylate reductase dimerisation CPFRC_RS01355 PF03807 NADP oxidoreductase coenzyme F420-dependent CPFRC_RS01365 PF12728 Helix-turn-helix domain CPFRC_RS01370 PF08213 Mitochondrial domain of unknown function (DUF1713) CPFRC_RS01375 PF06965 Na+/H+ antiporter 1 CPFRC_RS01375 PF13462 Thioredoxin CPFRC_RS01390 PF05768 Glutaredoxin-like domain (DUF836) CPFRC_RS01395 PF01488 Shikimate / quinate 5-dehydrogenase CPFRC_RS01395 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CPFRC_RS01395 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CPFRC_RS01400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CPFRC_RS01400 PF03900 Porphobilinogen deaminase, C-terminal domain CPFRC_RS01405 PF10414 Sirohaem synthase dimerisation region CPFRC_RS01405 PF14824 Sirohaem biosynthesis protein central CPFRC_RS01405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPFRC_RS01410 PF00490 Delta-aminolevulinic acid dehydratase CPFRC_RS01420 PF00403 Heavy-metal-associated domain CPFRC_RS01425 PF01208 Uroporphyrinogen decarboxylase (URO-D) CPFRC_RS01440 PF00202 Aminotransferase class-III CPFRC_RS01445 PF00300 Histidine phosphatase superfamily (branch 1) CPFRC_RS01455 PF02683 Cytochrome C biogenesis protein transmembrane region CPFRC_RS01460 PF05140 ResB-like family CPFRC_RS01465 PF01795 MraW methylase family CPFRC_RS01470 PF00005 ABC transporter CPFRC_RS01480 PF01032 FecCD transport family CPFRC_RS01485 PF01578 Cytochrome C assembly protein CPFRC_RS01500 PF01040 UbiA prenyltransferase family CPFRC_RS01505 PF13193 AMP-binding enzyme C-terminal domain CPFRC_RS01505 PF00501 AMP-binding enzyme CPFRC_RS01510 PF00378 Enoyl-CoA hydratase/isomerase CPFRC_RS01515 PF03606 C4-dicarboxylate anaerobic carrier CPFRC_RS01520 PF13378 Enolase C-terminal domain-like CPFRC_RS01520 PF18374 Enolase N-terminal domain-like CPFRC_RS01525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPFRC_RS01535 PF13439 Glycosyltransferase Family 4 CPFRC_RS01535 PF00534 Glycosyl transferases group 1 CPFRC_RS01540 PF01209 ubiE/COQ5 methyltransferase family CPFRC_RS01545 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPFRC_RS01545 PF00056 lactate/malate dehydrogenase, NAD binding domain CPFRC_RS01550 PF01494 FAD binding domain CPFRC_RS01555 PF00348 Polyprenyl synthetase CPFRC_RS01580 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CPFRC_RS01585 PF02357 Transcription termination factor nusG CPFRC_RS01590 PF03946 Ribosomal protein L11, N-terminal domain CPFRC_RS01590 PF00298 Ribosomal protein L11, RNA binding domain CPFRC_RS01595 PF00687 Ribosomal protein L1p/L10e family CPFRC_RS01605 PF03051 Peptidase C1-like family CPFRC_RS01610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CPFRC_RS01615 PF00466 Ribosomal protein L10 CPFRC_RS01620 PF16320 Ribosomal protein L7/L12 dimerisation domain CPFRC_RS01620 PF00542 Ribosomal protein L7/L12 C-terminal domain CPFRC_RS01630 PF01297 Zinc-uptake complex component A periplasmic CPFRC_RS01640 PF00005 ABC transporter CPFRC_RS01645 PF00950 ABC 3 transport family CPFRC_RS01660 PF10385 RNA polymerase beta subunit external 1 domain CPFRC_RS01660 PF04563 RNA polymerase beta subunit CPFRC_RS01660 PF04561 RNA polymerase Rpb2, domain 2 CPFRC_RS01660 PF00562 RNA polymerase Rpb2, domain 6 CPFRC_RS01660 PF04560 RNA polymerase Rpb2, domain 7 CPFRC_RS01660 PF04565 RNA polymerase Rpb2, domain 3 CPFRC_RS01665 PF04998 RNA polymerase Rpb1, domain 5 CPFRC_RS01665 PF00623 RNA polymerase Rpb1, domain 2 CPFRC_RS01665 PF04983 RNA polymerase Rpb1, domain 3 CPFRC_RS01665 PF04997 RNA polymerase Rpb1, domain 1 CPFRC_RS01670 PF07730 Histidine kinase CPFRC_RS01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPFRC_RS01670 PF05231 MASE1 CPFRC_RS01675 PF00196 Bacterial regulatory proteins, luxR family CPFRC_RS01675 PF00072 Response regulator receiver domain CPFRC_RS01685 PF00005 ABC transporter CPFRC_RS01700 PF03773 Predicted permease CPFRC_RS01705 PF04055 Radical SAM superfamily CPFRC_RS01720 PF00164 Ribosomal protein S12/S23 CPFRC_RS01725 PF00177 Ribosomal protein S7p/S5e CPFRC_RS01730 PF03144 Elongation factor Tu domain 2 CPFRC_RS01730 PF00009 Elongation factor Tu GTP binding domain CPFRC_RS01730 PF03764 Elongation factor G, domain IV CPFRC_RS01730 PF14492 Elongation Factor G, domain II CPFRC_RS01730 PF00679 Elongation factor G C-terminus CPFRC_RS01735 PF03143 Elongation factor Tu C-terminal domain CPFRC_RS01735 PF03144 Elongation factor Tu domain 2 CPFRC_RS01735 PF00009 Elongation factor Tu GTP binding domain CPFRC_RS01770 PF03780 Asp23 family, cell envelope-related function CPFRC_RS01775 PF00338 Ribosomal protein S10p/S20e CPFRC_RS01780 PF00297 Ribosomal protein L3 CPFRC_RS01785 PF00573 Ribosomal protein L4/L1 family CPFRC_RS01790 PF00276 Ribosomal protein L23 CPFRC_RS01795 PF03947 Ribosomal Proteins L2, C-terminal domain CPFRC_RS01795 PF00181 Ribosomal Proteins L2, RNA binding domain CPFRC_RS01800 PF00203 Ribosomal protein S19 CPFRC_RS01805 PF00237 Ribosomal protein L22p/L17e CPFRC_RS01810 PF00189 Ribosomal protein S3, C-terminal domain CPFRC_RS01810 PF07650 KH domain CPFRC_RS01815 PF00252 Ribosomal protein L16p/L10e CPFRC_RS01820 PF00831 Ribosomal L29 protein CPFRC_RS01825 PF00366 Ribosomal protein S17 CPFRC_RS01830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPFRC_RS01835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPFRC_RS01835 PF00005 ABC transporter CPFRC_RS01840 PF12911 N-terminal TM domain of oligopeptide transport permease C CPFRC_RS01840 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS01845 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS01850 PF00238 Ribosomal protein L14p/L23e CPFRC_RS01855 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CPFRC_RS01855 PF00467 KOW motif CPFRC_RS01860 PF00281 Ribosomal protein L5 CPFRC_RS01860 PF00673 ribosomal L5P family C-terminus CPFRC_RS01870 PF03315 Serine dehydratase beta chain CPFRC_RS01870 PF03313 Serine dehydratase alpha chain CPFRC_RS01875 PF17763 Glutaminase/Asparaginase C-terminal domain CPFRC_RS01875 PF00710 Asparaginase, N-terminal CPFRC_RS01880 PF01569 PAP2 superfamily CPFRC_RS01885 PF00410 Ribosomal protein S8 CPFRC_RS01890 PF00347 Ribosomal protein L6 CPFRC_RS01895 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CPFRC_RS01900 PF00333 Ribosomal protein S5, N-terminal domain CPFRC_RS01900 PF03719 Ribosomal protein S5, C-terminal domain CPFRC_RS01905 PF00327 Ribosomal protein L30p/L7e CPFRC_RS01910 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CPFRC_RS01925 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS01930 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS01950 PF00005 ABC transporter CPFRC_RS01950 PF17912 MalK OB fold domain CPFRC_RS01955 PF00344 SecY translocase CPFRC_RS01970 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase CPFRC_RS01970 PF13088 BNR repeat-like domain CPFRC_RS01970 PF00754 F5/8 type C domain CPFRC_RS01980 PF01176 Translation initiation factor 1A / IF-1 CPFRC_RS01985 PF00416 Ribosomal protein S13/S18 CPFRC_RS01990 PF00411 Ribosomal protein S11 CPFRC_RS01995 PF01479 S4 domain CPFRC_RS01995 PF00163 Ribosomal protein S4/S9 N-terminal domain CPFRC_RS02000 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CPFRC_RS02000 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CPFRC_RS02000 PF01000 RNA polymerase Rpb3/RpoA insert domain CPFRC_RS02005 PF01196 Ribosomal protein L17 CPFRC_RS02010 PF01416 tRNA pseudouridine synthase CPFRC_RS02015 PF05108 Type VII secretion system ESX-1, transport TM domain B CPFRC_RS02025 PF00082 Subtilase family CPFRC_RS02035 PF01580 FtsK/SpoIIIE family CPFRC_RS02045 PF06013 Proteins of 100 residues with WXG CPFRC_RS02050 PF06013 Proteins of 100 residues with WXG CPFRC_RS02055 PF00572 Ribosomal protein L13 CPFRC_RS02060 PF00380 Ribosomal protein S9/S16 CPFRC_RS02065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPFRC_RS02065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPFRC_RS02065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPFRC_RS02065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPFRC_RS02090 PF00842 Alanine racemase, C-terminal domain CPFRC_RS02090 PF01168 Alanine racemase, N-terminal domain CPFRC_RS02095 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CPFRC_RS02100 PF02080 TrkA-C domain CPFRC_RS02100 PF06826 Predicted Permease Membrane Region CPFRC_RS02110 PF00814 Glycoprotease family CPFRC_RS02120 PF00814 Glycoprotease family CPFRC_RS02125 PF00166 Chaperonin 10 Kd subunit CPFRC_RS02130 PF00118 TCP-1/cpn60 chaperonin family CPFRC_RS02135 PF02467 Transcription factor WhiB CPFRC_RS02140 PF04542 Sigma-70 region 2 CPFRC_RS02140 PF08281 Sigma-70, region 4 CPFRC_RS02155 PF00571 CBS domain CPFRC_RS02155 PF00478 IMP dehydrogenase / GMP reductase domain CPFRC_RS02160 PF00478 IMP dehydrogenase / GMP reductase domain CPFRC_RS02170 PF00117 Glutamine amidotransferase class-I CPFRC_RS02170 PF00958 GMP synthase C terminal domain CPFRC_RS02170 PF02540 NAD synthase CPFRC_RS02190 PF00072 Response regulator receiver domain CPFRC_RS02190 PF00196 Bacterial regulatory proteins, luxR family CPFRC_RS02205 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS02210 PF00005 ABC transporter CPFRC_RS02210 PF09383 NIL domain CPFRC_RS02215 PF03180 NLPA lipoprotein CPFRC_RS02220 PF03180 NLPA lipoprotein CPFRC_RS02235 PF01297 Zinc-uptake complex component A periplasmic CPFRC_RS02240 PF00005 ABC transporter CPFRC_RS02245 PF00950 ABC 3 transport family CPFRC_RS02250 PF02742 Iron dependent repressor, metal binding and dimerisation domain CPFRC_RS02250 PF00950 ABC 3 transport family CPFRC_RS02255 PF18357 Diphteria toxin repressor SH3 domain CPFRC_RS02255 PF02742 Iron dependent repressor, metal binding and dimerisation domain CPFRC_RS02255 PF01325 Iron dependent repressor, N-terminal DNA binding domain CPFRC_RS02260 PF00588 SpoU rRNA Methylase family CPFRC_RS02265 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CPFRC_RS02265 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CPFRC_RS02300 PF01032 FecCD transport family CPFRC_RS02305 PF00005 ABC transporter CPFRC_RS02320 PF03971 Monomeric isocitrate dehydrogenase CPFRC_RS02325 PF07690 Major Facilitator Superfamily CPFRC_RS02330 PF06445 GyrI-like small molecule binding domain CPFRC_RS02330 PF13411 MerR HTH family regulatory protein CPFRC_RS02345 PF00579 tRNA synthetases class I (W and Y) CPFRC_RS02350 PF03631 Virulence factor BrkB CPFRC_RS02355 PF07943 Penicillin-binding protein 5, C-terminal domain CPFRC_RS02355 PF00768 D-alanyl-D-alanine carboxypeptidase CPFRC_RS02390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPFRC_RS02390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPFRC_RS02390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPFRC_RS02390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPFRC_RS02395 PF04107 Glutamate-cysteine ligase family 2(GCS2) CPFRC_RS02395 PF01546 Peptidase family M20/M25/M40 CPFRC_RS02400 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPFRC_RS02400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPFRC_RS02405 PF00289 Biotin carboxylase, N-terminal domain CPFRC_RS02405 PF00364 Biotin-requiring enzyme CPFRC_RS02405 PF00682 HMGL-like CPFRC_RS02405 PF02436 Conserved carboxylase domain CPFRC_RS02405 PF02785 Biotin carboxylase C-terminal domain CPFRC_RS02405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPFRC_RS02410 PF07690 Major Facilitator Superfamily CPFRC_RS02420 PF00289 Biotin carboxylase, N-terminal domain CPFRC_RS02420 PF00364 Biotin-requiring enzyme CPFRC_RS02420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPFRC_RS02420 PF02785 Biotin carboxylase C-terminal domain CPFRC_RS02425 PF00581 Rhodanese-like domain CPFRC_RS02435 PF01757 Acyltransferase family CPFRC_RS02445 PF02545 Maf-like protein CPFRC_RS02450 PF00294 pfkB family carbohydrate kinase CPFRC_RS02455 PF00356 Bacterial regulatory proteins, lacI family CPFRC_RS02465 PF01039 Carboxyl transferase domain CPFRC_RS02470 PF01039 Carboxyl transferase domain CPFRC_RS02475 PF02237 Biotin protein ligase C terminal domain CPFRC_RS02475 PF03099 Biotin/lipoate A/B protein ligase family CPFRC_RS02475 PF08279 HTH domain CPFRC_RS02485 PF02222 ATP-grasp domain CPFRC_RS02485 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CPFRC_RS02490 PF00731 AIR carboxylase CPFRC_RS02505 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS02515 PF01547 Bacterial extracellular solute-binding protein CPFRC_RS02525 PF13399 LytR cell envelope-related transcriptional attenuator CPFRC_RS02525 PF03816 Cell envelope-related transcriptional attenuator domain CPFRC_RS02535 PF00483 Nucleotidyl transferase CPFRC_RS02545 PF02467 Transcription factor WhiB CPFRC_RS02560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPFRC_RS02560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPFRC_RS02560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPFRC_RS02560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPFRC_RS02570 PF01238 Phosphomannose isomerase type I CPFRC_RS02585 PF05221 S-adenosyl-L-homocysteine hydrolase CPFRC_RS02585 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CPFRC_RS02590 PF02223 Thymidylate kinase CPFRC_RS02595 PF00072 Response regulator receiver domain CPFRC_RS02595 PF00486 Transcriptional regulatory protein, C terminal CPFRC_RS02600 PF00672 HAMP domain CPFRC_RS02600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPFRC_RS02600 PF00512 His Kinase A (phospho-acceptor) domain CPFRC_RS02605 PF10647 Lipoprotein LpqB beta-propeller domain CPFRC_RS02615 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CPFRC_RS02615 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CPFRC_RS02620 PF07516 SecA Wing and Scaffold domain CPFRC_RS02620 PF01043 SecA preprotein cross-linking domain CPFRC_RS02620 PF07517 SecA DEAD-like domain CPFRC_RS02640 PF00175 Oxidoreductase NAD-binding domain CPFRC_RS02640 PF00111 2Fe-2S iron-sulfur cluster binding domain CPFRC_RS02640 PF00970 Oxidoreductase FAD-binding domain CPFRC_RS02645 PF00487 Fatty acid desaturase CPFRC_RS02650 PF03193 RsgA GTPase CPFRC_RS02655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPFRC_RS02660 PF02586 SOS response associated peptidase (SRAP) CPFRC_RS02665 PF04073 Aminoacyl-tRNA editing domain CPFRC_RS02670 PF04542 Sigma-70 region 2 CPFRC_RS02670 PF08281 Sigma-70, region 4 CPFRC_RS02680 PF02467 Transcription factor WhiB CPFRC_RS02700 PF00270 DEAD/DEAH box helicase CPFRC_RS02700 PF00271 Helicase conserved C-terminal domain CPFRC_RS02725 PF00580 UvrD/REP helicase N-terminal domain CPFRC_RS02725 PF13361 UvrD-like helicase C-terminal domain CPFRC_RS02735 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CPFRC_RS02735 PF09297 NADH pyrophosphatase zinc ribbon domain CPFRC_RS02735 PF00293 NUDIX domain CPFRC_RS02740 PF13361 UvrD-like helicase C-terminal domain CPFRC_RS02740 PF00580 UvrD/REP helicase N-terminal domain CPFRC_RS02740 PF00570 HRDC domain CPFRC_RS02760 PF05362 Lon protease (S16) C-terminal proteolytic domain CPFRC_RS02760 PF13180 PDZ domain CPFRC_RS02775 PF03699 Uncharacterised protein family (UPF0182) CPFRC_RS02805 PF04851 Type III restriction enzyme, res subunit CPFRC_RS02805 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CPFRC_RS02805 PF00271 Helicase conserved C-terminal domain CPFRC_RS02805 PF08463 EcoEI R protein C-terminal CPFRC_RS02820 PF07732 Multicopper oxidase CPFRC_RS02820 PF00394 Multicopper oxidase CPFRC_RS02840 PF13193 AMP-binding enzyme C-terminal domain CPFRC_RS02840 PF00550 Phosphopantetheine attachment site CPFRC_RS02840 PF00501 AMP-binding enzyme CPFRC_RS02840 PF00975 Thioesterase domain CPFRC_RS02840 PF00668 Condensation domain CPFRC_RS02855 PF00324 Amino acid permease CPFRC_RS02860 PF00682 HMGL-like CPFRC_RS02860 PF02436 Conserved carboxylase domain CPFRC_RS02865 PF01039 Carboxyl transferase domain CPFRC_RS02875 PF00682 HMGL-like CPFRC_RS02875 PF00364 Biotin-requiring enzyme CPFRC_RS02875 PF02436 Conserved carboxylase domain CPFRC_RS02885 PF00459 Inositol monophosphatase family CPFRC_RS02890 PF00459 Inositol monophosphatase family CPFRC_RS02895 PF00472 RF-1 domain CPFRC_RS02895 PF03462 PCRF domain CPFRC_RS02905 PF03806 AbgT putative transporter family CPFRC_RS02915 PF00005 ABC transporter CPFRC_RS02920 PF02687 FtsX-like permease family CPFRC_RS02920 PF18075 FtsX extracellular domain CPFRC_RS02925 PF01668 SmpB protein CPFRC_RS02935 PF00484 Carbonic anhydrase CPFRC_RS02945 PF01032 FecCD transport family CPFRC_RS02950 PF01032 FecCD transport family CPFRC_RS02955 PF00005 ABC transporter CPFRC_RS02990 PF00271 Helicase conserved C-terminal domain CPFRC_RS02990 PF04851 Type III restriction enzyme, res subunit CPFRC_RS03000 PF06737 Transglycosylase-like domain CPFRC_RS03000 PF11574 Protein of unknown function (DUF3235) CPFRC_RS03005 PF00313 'Cold-shock' DNA-binding domain CPFRC_RS03020 PF11228 Protein of unknown function (DUF3027) CPFRC_RS03025 PF00860 Permease family CPFRC_RS03030 PF00588 SpoU rRNA Methylase family CPFRC_RS03040 PF11268 Protein of unknown function (DUF3071) CPFRC_RS03045 PF00266 Aminotransferase class-V CPFRC_RS03050 PF00285 Citrate synthase, C-terminal domain CPFRC_RS03055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPFRC_RS03060 PF01039 Carboxyl transferase domain CPFRC_RS03065 PF00080 Copper/zinc superoxide dismutase (SODC) CPFRC_RS03070 PF00248 Aldo/keto reductase family CPFRC_RS03075 PF00378 Enoyl-CoA hydratase/isomerase CPFRC_RS03085 PF00474 Sodium:solute symporter family CPFRC_RS03095 PF08924 Domain of unknown function (DUF1906) CPFRC_RS03100 PF00999 Sodium/hydrogen exchanger family CPFRC_RS03100 PF02254 TrkA-N domain CPFRC_RS03110 PF01554 MatE CPFRC_RS03115 PF00291 Pyridoxal-phosphate dependent enzyme CPFRC_RS03120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPFRC_RS03130 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CPFRC_RS03135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPFRC_RS03145 PF12911 N-terminal TM domain of oligopeptide transport permease C CPFRC_RS03145 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS03150 PF09383 NIL domain CPFRC_RS03150 PF00005 ABC transporter CPFRC_RS03170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPFRC_RS03175 PF00462 Glutaredoxin CPFRC_RS03180 PF00186 Dihydrofolate reductase CPFRC_RS03185 PF00303 Thymidylate synthase CPFRC_RS03190 PF00459 Inositol monophosphatase family CPFRC_RS03195 PF00271 Helicase conserved C-terminal domain CPFRC_RS03195 PF00270 DEAD/DEAH box helicase CPFRC_RS03195 PF08494 DEAD/H associated CPFRC_RS03205 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CPFRC_RS03205 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CPFRC_RS03215 PF00342 Phosphoglucose isomerase CPFRC_RS03220 PF00171 Aldehyde dehydrogenase family CPFRC_RS03225 PF01817 Chorismate mutase type II CPFRC_RS03230 PF00580 UvrD/REP helicase N-terminal domain CPFRC_RS03230 PF13361 UvrD-like helicase C-terminal domain CPFRC_RS03235 PF01551 Peptidase family M23 CPFRC_RS03245 PF00551 Formyl transferase CPFRC_RS03250 PF01808 AICARFT/IMPCHase bienzyme CPFRC_RS03250 PF02142 MGS-like domain CPFRC_RS03255 PF00005 ABC transporter CPFRC_RS03260 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPFRC_RS03265 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS03270 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS03290 PF01084 Ribosomal protein S18 CPFRC_RS03295 PF00253 Ribosomal protein S14p/S29e CPFRC_RS03300 PF00471 Ribosomal protein L33 CPFRC_RS03305 PF00830 Ribosomal L28 family CPFRC_RS03310 PF01197 Ribosomal protein L31 CPFRC_RS03315 PF01783 Ribosomal L32p protein family CPFRC_RS03320 PF00486 Transcriptional regulatory protein, C terminal CPFRC_RS03320 PF00072 Response regulator receiver domain CPFRC_RS03325 PF00672 HAMP domain CPFRC_RS03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPFRC_RS03325 PF00512 His Kinase A (phospho-acceptor) domain CPFRC_RS03330 PF13180 PDZ domain CPFRC_RS03335 PF01967 MoaC family CPFRC_RS03335 PF00994 Probable molybdopterin binding domain CPFRC_RS03345 PF01741 Large-conductance mechanosensitive channel, MscL CPFRC_RS03360 PF00483 Nucleotidyl transferase CPFRC_RS03365 PF03453 MoeA N-terminal region (domain I and II) CPFRC_RS03365 PF03454 MoeA C-terminal region (domain IV) CPFRC_RS03365 PF00994 Probable molybdopterin binding domain CPFRC_RS03380 PF07681 DoxX CPFRC_RS03390 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CPFRC_RS03390 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase CPFRC_RS03400 PF02028 BCCT, betaine/carnitine/choline family transporter CPFRC_RS03410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPFRC_RS03415 PF08264 Anticodon-binding domain of tRNA CPFRC_RS03415 PF09334 tRNA synthetases class I (M) CPFRC_RS03420 PF01026 TatD related DNase CPFRC_RS03425 PF07501 G5 domain CPFRC_RS03425 PF06737 Transglycosylase-like domain CPFRC_RS03425 PF03990 G5-linked-Ubiquitin-like domain CPFRC_RS03430 PF00398 Ribosomal RNA adenine dimethylase CPFRC_RS03435 PF08544 GHMP kinases C terminal CPFRC_RS03435 PF00288 GHMP kinases N terminal domain CPFRC_RS03440 PF00005 ABC transporter CPFRC_RS03440 PF12848 ABC transporter CPFRC_RS03440 PF16326 ABC transporter C-terminal domain CPFRC_RS03455 PF03976 Polyphosphate kinase 2 (PPK2) CPFRC_RS03485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPFRC_RS03485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPFRC_RS03495 PF00561 alpha/beta hydrolase fold CPFRC_RS03500 PF16658 Class II release factor RF3, C-terminal domain CPFRC_RS03500 PF03144 Elongation factor Tu domain 2 CPFRC_RS03500 PF00009 Elongation factor Tu GTP binding domain CPFRC_RS03505 PF00106 short chain dehydrogenase CPFRC_RS03510 PF01195 Peptidyl-tRNA hydrolase CPFRC_RS03515 PF03060 Nitronate monooxygenase CPFRC_RS03525 PF01195 Peptidyl-tRNA hydrolase CPFRC_RS03530 PF14693 Ribosomal protein TL5, C-terminal domain CPFRC_RS03530 PF01386 Ribosomal L25p family CPFRC_RS03535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CPFRC_RS03535 PF17999 Pullulanase N1-terminal domain CPFRC_RS03535 PF00128 Alpha amylase, catalytic domain CPFRC_RS03540 PF14572 Phosphoribosyl synthetase-associated domain CPFRC_RS03540 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CPFRC_RS03545 PF12804 MobA-like NTP transferase domain CPFRC_RS03545 PF00132 Bacterial transferase hexapeptide (six repeats) CPFRC_RS03550 PF07731 Multicopper oxidase CPFRC_RS03550 PF00394 Multicopper oxidase CPFRC_RS03550 PF07732 Multicopper oxidase CPFRC_RS03560 PF00440 Bacterial regulatory proteins, tetR family CPFRC_RS03560 PF16295 Tetracyclin repressor-like, C-terminal domain CPFRC_RS03565 PF00270 DEAD/DEAH box helicase CPFRC_RS03565 PF00271 Helicase conserved C-terminal domain CPFRC_RS03565 PF03461 TRCF domain CPFRC_RS03565 PF17757 UvrB interaction domain CPFRC_RS03565 PF02559 CarD-like/TRCF domain CPFRC_RS03570 PF13520 Amino acid permease CPFRC_RS03575 PF03819 MazG nucleotide pyrophosphohydrolase domain CPFRC_RS03585 PF00113 Enolase, C-terminal TIM barrel domain CPFRC_RS03585 PF03952 Enolase, N-terminal domain CPFRC_RS03600 PF02541 Ppx/GppA phosphatase family CPFRC_RS03610 PF12833 Helix-turn-helix domain CPFRC_RS03625 PF03449 Transcription elongation factor, N-terminal CPFRC_RS03625 PF01272 Transcription elongation factor, GreA/GreB, C-term CPFRC_RS03635 PF02585 GlcNAc-PI de-N-acetylase CPFRC_RS03645 PF01255 Putative undecaprenyl diphosphate synthase CPFRC_RS03655 PF00485 Phosphoribulokinase / Uridine kinase family CPFRC_RS03660 PF00464 Serine hydroxymethyltransferase CPFRC_RS03665 PF07690 Major Facilitator Superfamily CPFRC_RS03695 PF07690 Major Facilitator Superfamily CPFRC_RS03705 PF00206 Lyase CPFRC_RS03705 PF10415 Fumarase C C-terminus CPFRC_RS03710 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CPFRC_RS03720 PF02609 Exonuclease VII small subunit CPFRC_RS03725 PF13742 OB-fold nucleic acid binding domain CPFRC_RS03725 PF02601 Exonuclease VII, large subunit CPFRC_RS03730 PF02401 LytB protein CPFRC_RS03740 PF01594 AI-2E family transporter CPFRC_RS03745 PF06071 Protein of unknown function (DUF933) CPFRC_RS03745 PF01926 50S ribosome-binding GTPase CPFRC_RS03760 PF03831 PhnA domain CPFRC_RS03760 PF08274 PhnA Zinc-Ribbon CPFRC_RS03765 PF00005 ABC transporter CPFRC_RS03765 PF00664 ABC transporter transmembrane region CPFRC_RS03770 PF00664 ABC transporter transmembrane region CPFRC_RS03770 PF00005 ABC transporter CPFRC_RS03780 PF05661 Protein of unknown function (DUF808) CPFRC_RS03790 PF09819 ABC-type cobalt transport system, permease component CPFRC_RS03795 PF00005 ABC transporter CPFRC_RS03805 PF02224 Cytidylate kinase CPFRC_RS03815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPFRC_RS03820 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS03830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPFRC_RS03830 PF00005 ABC transporter CPFRC_RS03835 PF00089 Trypsin CPFRC_RS03840 PF03960 ArsC family CPFRC_RS03860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPFRC_RS03865 PF02585 GlcNAc-PI de-N-acetylase CPFRC_RS03875 PF00037 4Fe-4S binding domain CPFRC_RS03880 PF00155 Aminotransferase class I and II CPFRC_RS03895 PF00324 Amino acid permease CPFRC_RS03900 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CPFRC_RS03900 PF14602 Hexapeptide repeat of succinyl-transferase CPFRC_RS03905 PF00324 Amino acid permease CPFRC_RS03910 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CPFRC_RS03910 PF14602 Hexapeptide repeat of succinyl-transferase CPFRC_RS03915 PF01546 Peptidase family M20/M25/M40 CPFRC_RS03915 PF07687 Peptidase dimerisation domain CPFRC_RS03920 PF03641 Possible lysine decarboxylase CPFRC_RS03925 PF00809 Pterin binding enzyme CPFRC_RS03930 PF00535 Glycosyl transferase family 2 CPFRC_RS03955 PF03306 Alpha-acetolactate decarboxylase CPFRC_RS03960 PF00534 Glycosyl transferases group 1 CPFRC_RS03960 PF13439 Glycosyltransferase Family 4 CPFRC_RS03965 PF00483 Nucleotidyl transferase CPFRC_RS03970 PF01596 O-methyltransferase CPFRC_RS03975 PF08281 Sigma-70, region 4 CPFRC_RS03975 PF04542 Sigma-70 region 2 CPFRC_RS03990 PF10609 NUBPL iron-transfer P-loop NTPase CPFRC_RS03990 PF01883 Iron-sulfur cluster assembly protein CPFRC_RS04000 PF00571 CBS domain CPFRC_RS04000 PF03448 MgtE intracellular N domain CPFRC_RS04000 PF01769 Divalent cation transporter CPFRC_RS04010 PF02779 Transketolase, pyrimidine binding domain CPFRC_RS04010 PF16870 2-oxoglutarate dehydrogenase C-terminal CPFRC_RS04010 PF00676 Dehydrogenase E1 component CPFRC_RS04010 PF16078 2-oxoglutarate dehydrogenase N-terminus CPFRC_RS04010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPFRC_RS04015 PF00005 ABC transporter CPFRC_RS04015 PF00664 ABC transporter transmembrane region CPFRC_RS04025 PF08501 Shikimate dehydrogenase substrate binding domain CPFRC_RS04030 PF00135 Carboxylesterase family CPFRC_RS04050 PF01263 Aldose 1-epimerase CPFRC_RS04065 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CPFRC_RS04065 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CPFRC_RS04070 PF08544 GHMP kinases C terminal CPFRC_RS04070 PF00288 GHMP kinases N terminal domain CPFRC_RS04070 PF10509 Galactokinase galactose-binding signature CPFRC_RS04075 PF00271 Helicase conserved C-terminal domain CPFRC_RS04075 PF00270 DEAD/DEAH box helicase CPFRC_RS04075 PF03880 DbpA RNA binding domain CPFRC_RS04100 PF00474 Sodium:solute symporter family CPFRC_RS04105 PF00176 SNF2 family N-terminal domain CPFRC_RS04105 PF12419 SNF2 Helicase protein CPFRC_RS04105 PF00271 Helicase conserved C-terminal domain CPFRC_RS04120 PF13175 AAA ATPase domain CPFRC_RS04130 PF01047 MarR family CPFRC_RS04160 PF02589 LUD domain CPFRC_RS04165 PF11870 Domain of unknown function (DUF3390) CPFRC_RS04165 PF02589 LUD domain CPFRC_RS04165 PF13183 4Fe-4S dicluster domain CPFRC_RS04170 PF02754 Cysteine-rich domain CPFRC_RS04175 PF02652 L-lactate permease CPFRC_RS04180 PF05746 DALR anticodon binding domain CPFRC_RS04180 PF03485 Arginyl tRNA synthetase N terminal domain CPFRC_RS04180 PF00750 tRNA synthetases class I (R) CPFRC_RS04185 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPFRC_RS04185 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPFRC_RS04190 PF01842 ACT domain CPFRC_RS04190 PF03447 Homoserine dehydrogenase, NAD binding domain CPFRC_RS04190 PF00742 Homoserine dehydrogenase CPFRC_RS04195 PF00288 GHMP kinases N terminal domain CPFRC_RS04205 PF00501 AMP-binding enzyme CPFRC_RS04205 PF13193 AMP-binding enzyme C-terminal domain CPFRC_RS04210 PF07498 Rho termination factor, N-terminal domain CPFRC_RS04210 PF07497 Rho termination factor, RNA-binding domain CPFRC_RS04210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPFRC_RS04210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPFRC_RS04210 PF07498 Rho termination factor, N-terminal domain CPFRC_RS04210 PF07497 Rho termination factor, RNA-binding domain CPFRC_RS04215 PF03462 PCRF domain CPFRC_RS04215 PF00472 RF-1 domain CPFRC_RS04220 PF17827 PrmC N-terminal domain CPFRC_RS04220 PF05175 Methyltransferase small domain CPFRC_RS04225 PF01300 Telomere recombination CPFRC_RS04230 PF00953 Glycosyl transferase family 4 CPFRC_RS04240 PF00119 ATP synthase A chain CPFRC_RS04245 PF00137 ATP synthase subunit C CPFRC_RS04250 PF00430 ATP synthase B/B' CF(0) CPFRC_RS04255 PF00213 ATP synthase delta (OSCP) subunit CPFRC_RS04260 PF00306 ATP synthase alpha/beta chain, C terminal domain CPFRC_RS04260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPFRC_RS04260 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPFRC_RS04265 PF00231 ATP synthase CPFRC_RS04270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPFRC_RS04270 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPFRC_RS04275 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CPFRC_RS04285 PF01939 Endonuclease NucS CPFRC_RS04300 PF01910 Thiamine-binding protein CPFRC_RS04305 PF00085 Thioredoxin CPFRC_RS04310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CPFRC_RS04310 PF02806 Alpha amylase, C-terminal all-beta domain CPFRC_RS04310 PF00128 Alpha amylase, catalytic domain CPFRC_RS04315 PF11896 Domain of unknown function (DUF3416) CPFRC_RS04320 PF00005 ABC transporter CPFRC_RS04330 PF18096 THUMP domain-like CPFRC_RS04335 PF01012 Electron transfer flavoprotein domain CPFRC_RS04340 PF00766 Electron transfer flavoprotein FAD-binding domain CPFRC_RS04340 PF01012 Electron transfer flavoprotein domain CPFRC_RS04345 PF00266 Aminotransferase class-V CPFRC_RS04370 PF12826 Helix-hairpin-helix motif CPFRC_RS04370 PF00533 BRCA1 C Terminus (BRCT) domain CPFRC_RS04370 PF01653 NAD-dependent DNA ligase adenylation domain CPFRC_RS04370 PF03120 NAD-dependent DNA ligase OB-fold domain CPFRC_RS04370 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CPFRC_RS04380 PF02686 Glu-tRNAGln amidotransferase C subunit CPFRC_RS04385 PF01425 Amidase CPFRC_RS04395 PF07690 Major Facilitator Superfamily CPFRC_RS04405 PF01032 FecCD transport family CPFRC_RS04410 PF00005 ABC transporter CPFRC_RS04420 PF00365 Phosphofructokinase CPFRC_RS04425 PF02934 GatB/GatE catalytic domain CPFRC_RS04425 PF02637 GatB domain CPFRC_RS04430 PF00248 Aldo/keto reductase family CPFRC_RS04435 PF01810 LysE type translocator CPFRC_RS04440 PF03466 LysR substrate binding domain CPFRC_RS04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPFRC_RS04465 PF00924 Mechanosensitive ion channel CPFRC_RS04475 PF01842 ACT domain CPFRC_RS04475 PF10369 Small subunit of acetolactate synthase CPFRC_RS04480 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CPFRC_RS04480 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CPFRC_RS04485 PF01545 Cation efflux family CPFRC_RS04500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPFRC_RS04500 PF01842 ACT domain CPFRC_RS04500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPFRC_RS04505 PF00180 Isocitrate/isopropylmalate dehydrogenase CPFRC_RS04525 PF01557 Fumarylacetoacetate (FAA) hydrolase family CPFRC_RS04530 PF00425 chorismate binding enzyme CPFRC_RS04535 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPFRC_RS04540 PF10503 Esterase PHB depolymerase CPFRC_RS04565 PF06968 Biotin and Thiamin Synthesis associated domain CPFRC_RS04565 PF04055 Radical SAM superfamily CPFRC_RS04580 PF00330 Aconitase family (aconitate hydratase) CPFRC_RS04585 PF00694 Aconitase C-terminal domain CPFRC_RS04590 PF00300 Histidine phosphatase superfamily (branch 1) CPFRC_RS04590 PF00293 NUDIX domain CPFRC_RS04595 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CPFRC_RS04595 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CPFRC_RS04600 PF01820 D-ala D-ala ligase N-terminus CPFRC_RS04600 PF07478 D-ala D-ala ligase C-terminus CPFRC_RS04610 PF00586 AIR synthase related protein, N-terminal domain CPFRC_RS04610 PF02769 AIR synthase related protein, C-terminal domain CPFRC_RS04615 PF03167 Uracil DNA glycosylase superfamily CPFRC_RS04620 PF13684 Dihydroxyacetone kinase family CPFRC_RS04620 PF02734 DAK2 domain CPFRC_RS04625 PF00270 DEAD/DEAH box helicase CPFRC_RS04625 PF17191 RecG wedge domain CPFRC_RS04625 PF00271 Helicase conserved C-terminal domain CPFRC_RS04630 PF00364 Biotin-requiring enzyme CPFRC_RS04640 PF01467 Cytidylyltransferase-like CPFRC_RS04650 PF02567 Phenazine biosynthesis-like protein CPFRC_RS04655 PF00005 ABC transporter CPFRC_RS04660 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS04680 PF00476 DNA polymerase family A CPFRC_RS04680 PF01367 5'-3' exonuclease, C-terminal SAM fold CPFRC_RS04680 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CPFRC_RS04685 PF01209 ubiE/COQ5 methyltransferase family CPFRC_RS04690 PF00575 S1 RNA binding domain CPFRC_RS04695 PF02378 Phosphotransferase system, EIIC CPFRC_RS04695 PF00367 phosphotransferase system, EIIB CPFRC_RS04695 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPFRC_RS04700 PF01121 Dephospho-CoA kinase CPFRC_RS04710 PF12344 Ultra-violet resistance protein B CPFRC_RS04710 PF00271 Helicase conserved C-terminal domain CPFRC_RS04710 PF04851 Type III restriction enzyme, res subunit CPFRC_RS04710 PF02151 UvrB/uvrC motif CPFRC_RS04710 PF17757 UvrB interaction domain CPFRC_RS04715 PF00582 Universal stress protein family CPFRC_RS04720 PF13538 UvrD-like helicase C-terminal domain CPFRC_RS04730 PF16123 Hydroxyacylglutathione hydrolase C-terminus CPFRC_RS04730 PF00753 Metallo-beta-lactamase superfamily CPFRC_RS04735 PF17755 UvrA DNA-binding domain CPFRC_RS04735 PF00005 ABC transporter CPFRC_RS04735 PF17760 UvrA interaction domain CPFRC_RS04740 PF05198 Translation initiation factor IF-3, N-terminal domain CPFRC_RS04740 PF00707 Translation initiation factor IF-3, C-terminal domain CPFRC_RS04745 PF01632 Ribosomal protein L35 CPFRC_RS04750 PF00453 Ribosomal protein L20 CPFRC_RS04760 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPFRC_RS04760 PF00588 SpoU rRNA Methylase family CPFRC_RS04765 PF01409 tRNA synthetases class II core domain (F) CPFRC_RS04765 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CPFRC_RS04770 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CPFRC_RS04770 PF03147 Ferredoxin-fold anticodon binding domain CPFRC_RS04770 PF03484 tRNA synthetase B5 domain CPFRC_RS04770 PF01588 Putative tRNA binding domain CPFRC_RS04770 PF03483 B3/4 domain CPFRC_RS04775 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPFRC_RS04775 PF02774 Semialdehyde dehydrogenase, dimerisation domain CPFRC_RS04785 PF00696 Amino acid kinase family CPFRC_RS04795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPFRC_RS04795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPFRC_RS04800 PF02863 Arginine repressor, C-terminal domain CPFRC_RS04800 PF01316 Arginine repressor, DNA binding domain CPFRC_RS04805 PF00764 Arginosuccinate synthase CPFRC_RS04810 PF14698 Argininosuccinate lyase C-terminal CPFRC_RS04810 PF00206 Lyase CPFRC_RS04815 PF03966 Trm112p-like protein CPFRC_RS04820 PF00579 tRNA synthetases class I (W and Y) CPFRC_RS04850 PF13344 Haloacid dehalogenase-like hydrolase CPFRC_RS04850 PF18407 GCN5-related N-acetyltransferase like domain CPFRC_RS04855 PF01479 S4 domain CPFRC_RS04855 PF01728 FtsJ-like methyltransferase CPFRC_RS04860 PF01513 ATP-NAD kinase CPFRC_RS04865 PF02463 RecF/RecN/SMC N terminal domain CPFRC_RS04875 PF11382 Copper transport outer membrane protein, MctB CPFRC_RS04885 PF02899 Phage integrase, N-terminal SAM-like domain CPFRC_RS04885 PF00589 Phage integrase family CPFRC_RS04890 PF13614 AAA domain CPFRC_RS04895 PF02616 Segregation and condensation protein ScpA CPFRC_RS04905 PF00854 POT family CPFRC_RS04910 PF00202 Aminotransferase class-III CPFRC_RS04920 PF04079 Segregation and condensation complex subunit ScpB CPFRC_RS04925 PF00849 RNA pseudouridylate synthase CPFRC_RS04925 PF01479 S4 domain CPFRC_RS04930 PF02224 Cytidylate kinase CPFRC_RS04935 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CPFRC_RS04935 PF01926 50S ribosome-binding GTPase CPFRC_RS04940 PF03605 Anaerobic c4-dicarboxylate membrane transporter CPFRC_RS04950 PF00756 Putative esterase CPFRC_RS04955 PF09924 Uncharacterised conserved protein (DUF2156) CPFRC_RS04960 PF01497 Periplasmic binding protein CPFRC_RS04965 PF01032 FecCD transport family CPFRC_RS04970 PF01032 FecCD transport family CPFRC_RS04975 PF00005 ABC transporter CPFRC_RS04980 PF04183 IucA / IucC family CPFRC_RS04980 PF06276 Ferric iron reductase FhuF-like transporter CPFRC_RS04990 PF02371 Transposase IS116/IS110/IS902 family CPFRC_RS04990 PF01548 Transposase CPFRC_RS05015 PF02810 SEC-C motif CPFRC_RS05025 PF07516 SecA Wing and Scaffold domain CPFRC_RS05025 PF07517 SecA DEAD-like domain CPFRC_RS05025 PF01043 SecA preprotein cross-linking domain CPFRC_RS05030 PF00498 FHA domain CPFRC_RS05035 PF00376 MerR family regulatory protein CPFRC_RS05045 PF13411 MerR HTH family regulatory protein CPFRC_RS05060 PF00571 CBS domain CPFRC_RS05060 PF01595 Cyclin M transmembrane N-terminal domain CPFRC_RS05065 PF00571 CBS domain CPFRC_RS05065 PF01595 Cyclin M transmembrane N-terminal domain CPFRC_RS05065 PF03471 Transporter associated domain CPFRC_RS05070 PF00271 Helicase conserved C-terminal domain CPFRC_RS05070 PF00270 DEAD/DEAH box helicase CPFRC_RS05075 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CPFRC_RS05075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPFRC_RS05080 PF03061 Thioesterase superfamily CPFRC_RS05085 PF01544 CorA-like Mg2+ transporter protein CPFRC_RS05105 PF00083 Sugar (and other) transporter CPFRC_RS05105 PF07690 Major Facilitator Superfamily CPFRC_RS05125 PF13397 RNA polymerase-binding protein CPFRC_RS05130 PF00535 Glycosyl transferase family 2 CPFRC_RS05135 PF00795 Carbon-nitrogen hydrolase CPFRC_RS05135 PF00535 Glycosyl transferase family 2 CPFRC_RS05145 PF02514 CobN/Magnesium Chelatase CPFRC_RS05150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CPFRC_RS05150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CPFRC_RS05155 PF02570 Precorrin-8X methylmutase CPFRC_RS05160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPFRC_RS05165 PF02571 Precorrin-6x reductase CbiJ/CobK CPFRC_RS05170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPFRC_RS05175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPFRC_RS05180 PF00106 short chain dehydrogenase CPFRC_RS05185 PF00557 Metallopeptidase family M24 CPFRC_RS05185 PF01321 Creatinase/Prolidase N-terminal domain CPFRC_RS05190 PF00270 DEAD/DEAH box helicase CPFRC_RS05190 PF08148 DSHCT (NUC185) domain CPFRC_RS05190 PF00271 Helicase conserved C-terminal domain CPFRC_RS05195 PF00902 Sec-independent protein translocase protein (TatC) CPFRC_RS05200 PF02416 mttA/Hcf106 family CPFRC_RS05205 PF13280 WYL domain CPFRC_RS05215 PF03136 Pup-ligase protein CPFRC_RS05220 PF05639 Pup-like protein CPFRC_RS05225 PF03136 Pup-ligase protein CPFRC_RS05230 PF00004 ATPase family associated with various cellular activities (AAA) CPFRC_RS05230 PF17758 Proteasomal ATPase OB N-terminal domain CPFRC_RS05230 PF16450 Proteasomal ATPase OB C-terminal domain CPFRC_RS05235 PF08704 tRNA methyltransferase complex GCD14 subunit CPFRC_RS05240 PF02127 Aminopeptidase I zinc metalloprotease (M18) CPFRC_RS05255 PF01268 Formate--tetrahydrofolate ligase CPFRC_RS05260 PF00206 Lyase CPFRC_RS05260 PF10415 Fumarase C C-terminus CPFRC_RS05265 PF03605 Anaerobic c4-dicarboxylate membrane transporter CPFRC_RS05270 PF08029 HisG, C-terminal domain CPFRC_RS05270 PF01634 ATP phosphoribosyltransferase CPFRC_RS05275 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CPFRC_RS05280 PF13419 Haloacid dehalogenase-like hydrolase CPFRC_RS05285 PF02607 B12 binding domain CPFRC_RS05285 PF02310 B12 binding domain CPFRC_RS05285 PF02965 Vitamin B12 dependent methionine synthase, activation domain CPFRC_RS05285 PF02574 Homocysteine S-methyltransferase CPFRC_RS05285 PF00809 Pterin binding enzyme CPFRC_RS05295 PF01406 tRNA synthetases class I (C) catalytic domain CPFRC_RS05300 PF02673 Bacitracin resistance protein BacA CPFRC_RS05305 PF00248 Aldo/keto reductase family CPFRC_RS05315 PF01180 Dihydroorotate dehydrogenase CPFRC_RS05330 PF01161 Phosphatidylethanolamine-binding protein CPFRC_RS05335 PF03610 PTS system fructose IIA component CPFRC_RS05335 PF05524 PEP-utilising enzyme, N-terminal CPFRC_RS05335 PF00381 PTS HPr component phosphorylation site CPFRC_RS05335 PF00391 PEP-utilising enzyme, mobile domain CPFRC_RS05340 PF02734 DAK2 domain CPFRC_RS05345 PF02733 Dak1 domain CPFRC_RS05355 PF08402 TOBE domain CPFRC_RS05355 PF00005 ABC transporter CPFRC_RS05370 PF00106 short chain dehydrogenase CPFRC_RS05380 PF02310 B12 binding domain CPFRC_RS05380 PF01642 Methylmalonyl-CoA mutase CPFRC_RS05385 PF01642 Methylmalonyl-CoA mutase CPFRC_RS05390 PF09335 SNARE associated Golgi protein CPFRC_RS05400 PF01145 SPFH domain / Band 7 family CPFRC_RS05425 PF00877 NlpC/P60 family CPFRC_RS05435 PF00694 Aconitase C-terminal domain CPFRC_RS05435 PF00330 Aconitase family (aconitate hydratase) CPFRC_RS05440 PF00440 Bacterial regulatory proteins, tetR family CPFRC_RS05455 PF05167 Uncharacterised ACR (DUF711) CPFRC_RS05475 PF00005 ABC transporter CPFRC_RS05475 PF12848 ABC transporter CPFRC_RS05480 PF01883 Iron-sulfur cluster assembly protein CPFRC_RS05485 PF01592 NifU-like N terminal domain CPFRC_RS05490 PF00266 Aminotransferase class-V CPFRC_RS05495 PF00005 ABC transporter CPFRC_RS05500 PF01458 Uncharacterized protein family (UPF0051) CPFRC_RS05505 PF01458 Uncharacterized protein family (UPF0051) CPFRC_RS05520 PF00005 ABC transporter CPFRC_RS05520 PF13732 Domain of unknown function (DUF4162) CPFRC_RS05535 PF01040 UbiA prenyltransferase family CPFRC_RS05540 PF02779 Transketolase, pyrimidine binding domain CPFRC_RS05540 PF00456 Transketolase, thiamine diphosphate binding domain CPFRC_RS05540 PF02780 Transketolase, C-terminal domain CPFRC_RS05545 PF00923 Transaldolase/Fructose-6-phosphate aldolase CPFRC_RS05550 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CPFRC_RS05550 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CPFRC_RS05560 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CPFRC_RS05565 PF03840 Preprotein translocase SecG subunit CPFRC_RS05570 PF00311 Phosphoenolpyruvate carboxylase CPFRC_RS05575 PF00121 Triosephosphate isomerase CPFRC_RS05580 PF00162 Phosphoglycerate kinase CPFRC_RS05585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPFRC_RS05585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPFRC_RS05590 PF10298 WhiA N-terminal LAGLIDADG-like domain CPFRC_RS05590 PF14527 WhiA LAGLIDADG-like domain CPFRC_RS05590 PF02650 WhiA C-terminal HTH domain CPFRC_RS05595 PF01933 Uncharacterised protein family UPF0052 CPFRC_RS05600 PF03668 P-loop ATPase protein family CPFRC_RS05605 PF02151 UvrB/uvrC motif CPFRC_RS05605 PF01541 GIY-YIG catalytic domain CPFRC_RS05605 PF08459 UvrC Helix-hairpin-helix N-terminal CPFRC_RS05610 PF10756 Bacterial PH domain CPFRC_RS05615 PF00885 6,7-dimethyl-8-ribityllumazine synthase CPFRC_RS05620 PF00925 GTP cyclohydrolase II CPFRC_RS05620 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CPFRC_RS05625 PF00677 Lumazine binding domain CPFRC_RS05630 PF01872 RibD C-terminal domain CPFRC_RS05630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPFRC_RS05635 PF00834 Ribulose-phosphate 3 epimerase family CPFRC_RS05640 PF01189 16S rRNA methyltransferase RsmB/F CPFRC_RS05640 PF01029 NusB family CPFRC_RS05645 PF00551 Formyl transferase CPFRC_RS05645 PF02911 Formyl transferase, C-terminal domain CPFRC_RS05650 PF01327 Polypeptide deformylase CPFRC_RS05655 PF17764 3′ DNA-binding domain (3′BD) CPFRC_RS05660 PF02772 S-adenosylmethionine synthetase, central domain CPFRC_RS05660 PF00438 S-adenosylmethionine synthetase, N-terminal domain CPFRC_RS05660 PF02773 S-adenosylmethionine synthetase, C-terminal domain CPFRC_RS05665 PF04127 DNA / pantothenate metabolism flavoprotein CPFRC_RS05665 PF02441 Flavoprotein CPFRC_RS05670 PF01192 RNA polymerase Rpb6 CPFRC_RS05675 PF00625 Guanylate kinase CPFRC_RS05685 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CPFRC_RS05690 PF02142 MGS-like domain CPFRC_RS05690 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPFRC_RS05690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPFRC_RS05695 PF00117 Glutamine amidotransferase class-I CPFRC_RS05695 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CPFRC_RS05700 PF01979 Amidohydrolase family CPFRC_RS05705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPFRC_RS05705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPFRC_RS05710 PF00156 Phosphoribosyl transferase domain CPFRC_RS05715 PF01370 NAD dependent epimerase/dehydratase family CPFRC_RS05715 PF08338 Domain of unknown function (DUF1731) CPFRC_RS05730 PF01029 NusB family CPFRC_RS05735 PF09285 Elongation factor P, C-terminal CPFRC_RS05735 PF08207 Elongation factor P (EF-P) KOW-like domain CPFRC_RS05735 PF01132 Elongation factor P (EF-P) OB domain CPFRC_RS05740 PF00557 Metallopeptidase family M24 CPFRC_RS05740 PF01321 Creatinase/Prolidase N-terminal domain CPFRC_RS05745 PF01220 Dehydroquinase class II CPFRC_RS05750 PF01761 3-dehydroquinate synthase CPFRC_RS05755 PF01202 Shikimate kinase CPFRC_RS05760 PF01264 Chorismate synthase CPFRC_RS05770 PF08501 Shikimate dehydrogenase substrate binding domain CPFRC_RS05770 PF01488 Shikimate / quinate 5-dehydrogenase CPFRC_RS05770 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CPFRC_RS05780 PF03652 Holliday junction resolvase CPFRC_RS05785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPFRC_RS05785 PF02272 DHHA1 domain CPFRC_RS05785 PF01411 tRNA synthetases class II (A) CPFRC_RS05790 PF12002 MgsA AAA+ ATPase C terminal CPFRC_RS05790 PF00004 ATPase family associated with various cellular activities (AAA) CPFRC_RS05790 PF16193 AAA C-terminal domain CPFRC_RS05800 PF01336 OB-fold nucleic acid binding domain CPFRC_RS05800 PF00152 tRNA synthetases class II (D, K and N) CPFRC_RS05800 PF02938 GAD domain CPFRC_RS05805 PF04228 Putative neutral zinc metallopeptidase CPFRC_RS05810 PF04434 SWIM zinc finger CPFRC_RS05810 PF00176 SNF2 family N-terminal domain CPFRC_RS05810 PF00271 Helicase conserved C-terminal domain CPFRC_RS05830 PF03358 NADPH-dependent FMN reductase CPFRC_RS05835 PF03315 Serine dehydratase beta chain CPFRC_RS05835 PF03313 Serine dehydratase alpha chain CPFRC_RS05840 PF03328 HpcH/HpaI aldolase/citrate lyase family CPFRC_RS05850 PF02515 CoA-transferase family III CPFRC_RS05855 PF13393 Histidyl-tRNA synthetase CPFRC_RS05855 PF03129 Anticodon binding domain CPFRC_RS05860 PF00753 Metallo-beta-lactamase superfamily CPFRC_RS05865 PF08534 Redoxin CPFRC_RS05870 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPFRC_RS05880 PF04607 Region found in RelA / SpoT proteins CPFRC_RS05880 PF02824 TGS domain CPFRC_RS05880 PF13291 ACT domain CPFRC_RS05885 PF00156 Phosphoribosyl transferase domain CPFRC_RS05890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPFRC_RS05895 PF02355 Protein export membrane protein CPFRC_RS05895 PF07549 SecD/SecF GG Motif CPFRC_RS05900 PF02355 Protein export membrane protein CPFRC_RS05900 PF07549 SecD/SecF GG Motif CPFRC_RS05910 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPFRC_RS05910 PF05491 RuvB C-terminal winged helix domain CPFRC_RS05910 PF17864 RuvB AAA lid domain CPFRC_RS05915 PF01330 RuvA N terminal domain CPFRC_RS05915 PF07499 RuvA, C-terminal domain CPFRC_RS05920 PF02075 Crossover junction endodeoxyribonuclease RuvC CPFRC_RS05925 PF01709 Transcriptional regulator CPFRC_RS05940 PF03744 6-carboxyhexanoate--CoA ligase CPFRC_RS05945 PF03744 6-carboxyhexanoate--CoA ligase CPFRC_RS05945 PF00155 Aminotransferase class I and II CPFRC_RS05955 PF13439 Glycosyltransferase Family 4 CPFRC_RS05960 PF03279 Bacterial lipid A biosynthesis acyltransferase CPFRC_RS05965 PF01066 CDP-alcohol phosphatidyltransferase CPFRC_RS05970 PF01230 HIT domain CPFRC_RS05975 PF03129 Anticodon binding domain CPFRC_RS05975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPFRC_RS05975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPFRC_RS05980 PF10518 TAT (twin-arginine translocation) pathway signal sequence CPFRC_RS05980 PF04261 Dyp-type peroxidase family CPFRC_RS06030 PF09594 Glycosyltransferase family 87 CPFRC_RS06035 PF01641 SelR domain CPFRC_RS06055 PF02780 Transketolase, C-terminal domain CPFRC_RS06055 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CPFRC_RS06055 PF02779 Transketolase, pyrimidine binding domain CPFRC_RS06060 PF01938 TRAM domain CPFRC_RS06060 PF05958 tRNA (Uracil-5-)-methyltransferase CPFRC_RS06075 PF00692 dUTPase CPFRC_RS06095 PF00480 ROK family CPFRC_RS06100 PF04545 Sigma-70, region 4 CPFRC_RS06100 PF04542 Sigma-70 region 2 CPFRC_RS06100 PF04539 Sigma-70 region 3 CPFRC_RS06100 PF00140 Sigma-70 factor, region 1.2 CPFRC_RS06110 PF04851 Type III restriction enzyme, res subunit CPFRC_RS06125 PF17827 PrmC N-terminal domain CPFRC_RS06125 PF05175 Methyltransferase small domain CPFRC_RS06130 PF02580 D-Tyr-tRNA(Tyr) deacylase CPFRC_RS06135 PF04539 Sigma-70 region 3 CPFRC_RS06135 PF00140 Sigma-70 factor, region 1.2 CPFRC_RS06135 PF04542 Sigma-70 region 2 CPFRC_RS06135 PF04545 Sigma-70, region 4 CPFRC_RS06140 PF02742 Iron dependent repressor, metal binding and dimerisation domain CPFRC_RS06140 PF01325 Iron dependent repressor, N-terminal DNA binding domain CPFRC_RS06140 PF18357 Diphteria toxin repressor SH3 domain CPFRC_RS06145 PF01370 NAD dependent epimerase/dehydratase family CPFRC_RS06165 PF02627 Carboxymuconolactone decarboxylase family CPFRC_RS06170 PF00578 AhpC/TSA family CPFRC_RS06175 PF03466 LysR substrate binding domain CPFRC_RS06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPFRC_RS06185 PF00270 DEAD/DEAH box helicase CPFRC_RS06185 PF11898 Domain of unknown function (DUF3418) CPFRC_RS06185 PF04408 Helicase associated domain (HA2) CPFRC_RS06185 PF00271 Helicase conserved C-terminal domain CPFRC_RS06185 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CPFRC_RS06190 PF03477 ATP cone domain CPFRC_RS06200 PF01726 LexA DNA binding domain CPFRC_RS06200 PF00717 Peptidase S24-like CPFRC_RS06205 PF00455 DeoR C terminal sensor domain CPFRC_RS06205 PF08220 DeoR-like helix-turn-helix domain CPFRC_RS06210 PF02896 PEP-utilising enzyme, TIM barrel domain CPFRC_RS06210 PF00391 PEP-utilising enzyme, mobile domain CPFRC_RS06210 PF05524 PEP-utilising enzyme, N-terminal CPFRC_RS06215 PF00455 DeoR C terminal sensor domain CPFRC_RS06215 PF08220 DeoR-like helix-turn-helix domain CPFRC_RS06220 PF00294 pfkB family carbohydrate kinase CPFRC_RS06225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPFRC_RS06225 PF02378 Phosphotransferase system, EIIC CPFRC_RS06235 PF00381 PTS HPr component phosphorylation site CPFRC_RS06240 PF00296 Luciferase-like monooxygenase CPFRC_RS06245 PF03358 NADPH-dependent FMN reductase CPFRC_RS06250 PF00860 Permease family CPFRC_RS06255 PF16360 GTP-binding GTPase Middle Region CPFRC_RS06255 PF13167 GTP-binding GTPase N-terminal CPFRC_RS06255 PF01926 50S ribosome-binding GTPase CPFRC_RS06270 PF01678 Diaminopimelate epimerase CPFRC_RS06285 PF03993 Domain of Unknown Function (DUF349) CPFRC_RS06300 PF04055 Radical SAM superfamily CPFRC_RS06300 PF00919 Uncharacterized protein family UPF0004 CPFRC_RS06305 PF02631 RecX family CPFRC_RS06310 PF00154 recA bacterial DNA recombination protein CPFRC_RS06320 PF02632 BioY family CPFRC_RS06325 PF00005 ABC transporter CPFRC_RS06330 PF02361 Cobalt transport protein CPFRC_RS06345 PF00994 Probable molybdopterin binding domain CPFRC_RS06345 PF18146 Damage-inducible protein CinA KH domain CPFRC_RS06345 PF02464 Competence-damaged protein CPFRC_RS06350 PF01066 CDP-alcohol phosphatidyltransferase CPFRC_RS06360 PF03741 Integral membrane protein TerC family CPFRC_RS06365 PF17854 FtsK alpha domain CPFRC_RS06365 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CPFRC_RS06365 PF01580 FtsK/SpoIIIE family CPFRC_RS06365 PF09397 Ftsk gamma domain CPFRC_RS06375 PF12706 Beta-lactamase superfamily domain CPFRC_RS06375 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CPFRC_RS06375 PF17770 Ribonuclease J C-terminal domain CPFRC_RS06380 PF00701 Dihydrodipicolinate synthetase family CPFRC_RS06385 PF02511 Thymidylate synthase complementing protein CPFRC_RS06390 PF01113 Dihydrodipicolinate reductase, N-terminus CPFRC_RS06390 PF05173 Dihydrodipicolinate reductase, C-terminus CPFRC_RS06395 PF00575 S1 RNA binding domain CPFRC_RS06395 PF00013 KH domain CPFRC_RS06395 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CPFRC_RS06395 PF01138 3' exoribonuclease family, domain 1 CPFRC_RS06400 PF00312 Ribosomal protein S15 CPFRC_RS06405 PF01156 Inosine-uridine preferring nucleoside hydrolase CPFRC_RS06410 PF01687 Riboflavin kinase CPFRC_RS06410 PF06574 FAD synthetase CPFRC_RS06415 PF01509 TruB family pseudouridylate synthase (N terminal domain) CPFRC_RS06415 PF16198 tRNA pseudouridylate synthase B C-terminal domain CPFRC_RS06415 PF09142 tRNA Pseudouridine synthase II, C terminal CPFRC_RS06420 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CPFRC_RS06420 PF01648 4'-phosphopantetheinyl transferase superfamily CPFRC_RS06430 PF01554 MatE CPFRC_RS06440 PF02033 Ribosome-binding factor A CPFRC_RS06445 PF11987 Translation-initiation factor 2 CPFRC_RS06445 PF00009 Elongation factor Tu GTP binding domain CPFRC_RS06445 PF04760 Translation initiation factor IF-2, N-terminal region CPFRC_RS06455 PF13184 NusA-like KH domain CPFRC_RS06455 PF08529 NusA N-terminal domain CPFRC_RS06460 PF02576 RimP N-terminal domain CPFRC_RS06470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPFRC_RS06470 PF04073 Aminoacyl-tRNA editing domain CPFRC_RS06470 PF03129 Anticodon binding domain CPFRC_RS06475 PF03883 Peroxide stress protein YaaA CPFRC_RS06480 PF10414 Sirohaem synthase dimerisation region CPFRC_RS06480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPFRC_RS06480 PF14824 Sirohaem biosynthesis protein central CPFRC_RS06485 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CPFRC_RS06490 PF02492 CobW/HypB/UreG, nucleotide-binding domain CPFRC_RS06490 PF07683 Cobalamin synthesis protein cobW C-terminal domain CPFRC_RS06495 PF12833 Helix-turn-helix domain CPFRC_RS06495 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CPFRC_RS06495 PF02805 Metal binding domain of Ada CPFRC_RS06495 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CPFRC_RS06500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CPFRC_RS06500 PF07685 CobB/CobQ-like glutamine amidotransferase domain CPFRC_RS06505 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CPFRC_RS06505 PF12557 Cob(I)alamin adenosyltransferase N terminal CPFRC_RS06510 PF07728 AAA domain (dynein-related subfamily) CPFRC_RS06510 PF17863 AAA lid domain CPFRC_RS06510 PF13519 von Willebrand factor type A domain CPFRC_RS06515 PF07728 AAA domain (dynein-related subfamily) CPFRC_RS06515 PF17863 AAA lid domain CPFRC_RS06515 PF13519 von Willebrand factor type A domain CPFRC_RS06520 PF06039 Malate:quinone oxidoreductase (Mqo) CPFRC_RS06530 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPFRC_RS06530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPFRC_RS06540 PF07685 CobB/CobQ-like glutamine amidotransferase domain CPFRC_RS06540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CPFRC_RS06545 PF00557 Metallopeptidase family M24 CPFRC_RS06555 PF04551 GcpE protein CPFRC_RS06560 PF02163 Peptidase family M50 CPFRC_RS06560 PF17820 PDZ domain CPFRC_RS06565 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CPFRC_RS06565 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CPFRC_RS06565 PF13288 DXP reductoisomerase C-terminal domain CPFRC_RS06570 PF10939 Protein of unknown function (DUF2631) CPFRC_RS06590 PF01765 Ribosome recycling factor CPFRC_RS06595 PF00696 Amino acid kinase family CPFRC_RS06600 PF00889 Elongation factor TS CPFRC_RS06605 PF00318 Ribosomal protein S2 CPFRC_RS06610 PF01551 Peptidase family M23 CPFRC_RS06615 PF00589 Phage integrase family CPFRC_RS06615 PF02899 Phage integrase, N-terminal SAM-like domain CPFRC_RS06620 PF17782 DprA winged helix domain CPFRC_RS06620 PF02481 DNA recombination-mediator protein A CPFRC_RS06625 PF01078 Magnesium chelatase, subunit ChlI CPFRC_RS06625 PF13335 Magnesium chelatase, subunit ChlI C-terminal CPFRC_RS06630 PF10611 Protein of unknown function (DUF2469) CPFRC_RS06635 PF01351 Ribonuclease HII CPFRC_RS06640 PF10502 Signal peptidase, peptidase S26 CPFRC_RS06645 PF01245 Ribosomal protein L19 CPFRC_RS06650 PF17674 HHH domain CPFRC_RS06650 PF00575 S1 RNA binding domain CPFRC_RS06650 PF09371 Tex-like protein N-terminal domain CPFRC_RS06650 PF16921 Tex protein YqgF-like domain CPFRC_RS06655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPFRC_RS06655 PF02378 Phosphotransferase system, EIIC CPFRC_RS06655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPFRC_RS06665 PF01746 tRNA (Guanine-1)-methyltransferase CPFRC_RS06670 PF05239 PRC-barrel domain CPFRC_RS06670 PF01782 RimM N-terminal domain CPFRC_RS06680 PF00886 Ribosomal protein S16 CPFRC_RS06685 PF02978 Signal peptide binding domain CPFRC_RS06685 PF00448 SRP54-type protein, GTPase domain CPFRC_RS06685 PF02881 SRP54-type protein, helical bundle domain CPFRC_RS06690 PF01966 HD domain CPFRC_RS06690 PF01909 Nucleotidyltransferase domain CPFRC_RS06695 PF00543 Nitrogen regulatory protein P-II CPFRC_RS06700 PF00448 SRP54-type protein, GTPase domain CPFRC_RS06700 PF02881 SRP54-type protein, helical bundle domain CPFRC_RS06710 PF02463 RecF/RecN/SMC N terminal domain CPFRC_RS06710 PF06470 SMC proteins Flexible Hinge Domain CPFRC_RS06715 PF00708 Acylphosphatase CPFRC_RS06720 PF01235 Sodium:alanine symporter family CPFRC_RS06725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CPFRC_RS06725 PF06827 Zinc finger found in FPG and IleRS CPFRC_RS06725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CPFRC_RS06730 PF14622 Ribonuclease-III-like CPFRC_RS06730 PF00035 Double-stranded RNA binding motif CPFRC_RS06735 PF02620 Large ribosomal RNA subunit accumulation protein YceD CPFRC_RS06750 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CPFRC_RS06750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CPFRC_RS06755 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPFRC_RS06755 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CPFRC_RS06760 PF02595 Glycerate kinase family CPFRC_RS06775 PF07687 Peptidase dimerisation domain CPFRC_RS06775 PF01546 Peptidase family M20/M25/M40 CPFRC_RS06785 PF00343 Carbohydrate phosphorylase CPFRC_RS06795 PF00224 Pyruvate kinase, barrel domain CPFRC_RS06795 PF02887 Pyruvate kinase, alpha/beta domain CPFRC_RS06800 PF01790 Prolipoprotein diacylglyceryl transferase CPFRC_RS06805 PF00218 Indole-3-glycerol phosphate synthase CPFRC_RS06815 PF01502 Phosphoribosyl-AMP cyclohydrolase CPFRC_RS06820 PF00977 Histidine biosynthesis protein CPFRC_RS06825 PF00459 Inositol monophosphatase family CPFRC_RS06830 PF00977 Histidine biosynthesis protein CPFRC_RS06835 PF00117 Glutamine amidotransferase class-I CPFRC_RS06850 PF00475 Imidazoleglycerol-phosphate dehydratase CPFRC_RS06855 PF00155 Aminotransferase class I and II CPFRC_RS06860 PF00815 Histidinol dehydrogenase CPFRC_RS06880 PF02909 Tetracyclin repressor-like, C-terminal domain CPFRC_RS06880 PF00440 Bacterial regulatory proteins, tetR family CPFRC_RS06885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CPFRC_RS06885 PF00128 Alpha amylase, catalytic domain CPFRC_RS06890 PF01336 OB-fold nucleic acid binding domain CPFRC_RS06890 PF14480 DNA polymerase III polC-type N-terminus I CPFRC_RS06890 PF11490 DNA polymerase III polC-type N-terminus II CPFRC_RS06890 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPFRC_RS06890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPFRC_RS06890 PF14579 Helix-hairpin-helix motif CPFRC_RS06890 PF00929 Exonuclease CPFRC_RS06890 PF02811 PHP domain CPFRC_RS06915 PF09186 Domain of unknown function (DUF1949) CPFRC_RS06915 PF01205 Uncharacterized protein family UPF0029 CPFRC_RS06920 PF00585 C-terminal regulatory domain of Threonine dehydratase CPFRC_RS06920 PF00291 Pyridoxal-phosphate dependent enzyme CPFRC_RS06925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPFRC_RS06925 PF02811 PHP domain CPFRC_RS06925 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPFRC_RS06925 PF14579 Helix-hairpin-helix motif CPFRC_RS06930 PF00892 EamA-like transporter family CPFRC_RS06940 PF00849 RNA pseudouridylate synthase CPFRC_RS06945 PF01252 Signal peptidase (SPase) II CPFRC_RS06960 PF00710 Asparaginase, N-terminal CPFRC_RS06960 PF17763 Glutaminase/Asparaginase C-terminal domain CPFRC_RS06965 PF00817 impB/mucB/samB family CPFRC_RS06965 PF11799 impB/mucB/samB family C-terminal domain CPFRC_RS06965 PF11798 IMS family HHH motif CPFRC_RS06970 PF08264 Anticodon-binding domain of tRNA CPFRC_RS06970 PF00133 tRNA synthetases class I (I, L, M and V) CPFRC_RS06980 PF05103 DivIVA protein CPFRC_RS06990 PF04472 Cell division protein SepF CPFRC_RS07000 PF00091 Tubulin/FtsZ family, GTPase domain CPFRC_RS07000 PF12327 FtsZ family, C-terminal domain CPFRC_RS07010 PF08245 Mur ligase middle domain CPFRC_RS07010 PF02875 Mur ligase family, glutamate ligase domain CPFRC_RS07010 PF01225 Mur ligase family, catalytic domain CPFRC_RS07015 PF04101 Glycosyltransferase family 28 C-terminal domain CPFRC_RS07015 PF03033 Glycosyltransferase family 28 N-terminal domain CPFRC_RS07020 PF01098 Cell cycle protein CPFRC_RS07025 PF08245 Mur ligase middle domain CPFRC_RS07030 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CPFRC_RS07030 PF00953 Glycosyl transferase family 4 CPFRC_RS07035 PF08245 Mur ligase middle domain CPFRC_RS07035 PF01225 Mur ligase family, catalytic domain CPFRC_RS07035 PF02875 Mur ligase family, glutamate ligase domain CPFRC_RS07040 PF08245 Mur ligase middle domain CPFRC_RS07040 PF02875 Mur ligase family, glutamate ligase domain CPFRC_RS07040 PF01225 Mur ligase family, catalytic domain CPFRC_RS07045 PF00905 Penicillin binding protein transpeptidase domain CPFRC_RS07045 PF03717 Penicillin-binding Protein dimerisation domain CPFRC_RS07055 PF01795 MraW methylase family CPFRC_RS07060 PF02381 MraZ protein, putative antitoxin-like CPFRC_RS07085 PF02219 Methylenetetrahydrofolate reductase CPFRC_RS07100 PF18367 Rv2175c C-terminal domain of unknown function CPFRC_RS07105 PF00069 Protein kinase domain CPFRC_RS07105 PF03793 PASTA domain CPFRC_RS07110 PF01474 Class-II DAHP synthetase family CPFRC_RS07115 PF16473 3' exoribonuclease, RNase T-like CPFRC_RS07130 PF00480 ROK family CPFRC_RS07135 PF00534 Glycosyl transferases group 1 CPFRC_RS07135 PF13439 Glycosyltransferase Family 4 CPFRC_RS07140 PF00877 NlpC/P60 family CPFRC_RS07145 PF00877 NlpC/P60 family CPFRC_RS07150 PF13631 Cytochrome b(N-terminal)/b6/petB CPFRC_RS07155 PF00355 Rieske [2Fe-2S] domain CPFRC_RS07160 PF00034 Cytochrome c CPFRC_RS07160 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CPFRC_RS07165 PF00510 Cytochrome c oxidase subunit III CPFRC_RS07170 PF12270 Cytochrome c oxidase subunit IV CPFRC_RS07175 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CPFRC_RS07180 PF00733 Asparagine synthase CPFRC_RS07180 PF13537 Glutamine amidotransferase domain CPFRC_RS07185 PF01521 Iron-sulphur cluster biosynthesis CPFRC_RS07190 PF11241 Protein of unknown function (DUF3043) CPFRC_RS07195 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CPFRC_RS07200 PF02277 Phosphoribosyltransferase CPFRC_RS07205 PF02654 Cobalamin-5-phosphate synthase CPFRC_RS07210 PF01063 Amino-transferase class IV CPFRC_RS07215 PF00883 Cytosol aminopeptidase family, catalytic domain CPFRC_RS07215 PF02789 Cytosol aminopeptidase family, N-terminal domain CPFRC_RS07230 PF02347 Glycine cleavage system P-protein CPFRC_RS07235 PF08669 Glycine cleavage T-protein C-terminal barrel domain CPFRC_RS07235 PF01571 Aminomethyltransferase folate-binding domain CPFRC_RS07240 PF01597 Glycine cleavage H-protein CPFRC_RS07250 PF03099 Biotin/lipoate A/B protein ligase family CPFRC_RS07255 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CPFRC_RS07255 PF04055 Radical SAM superfamily CPFRC_RS07260 PF13829 Domain of unknown function (DUF4191) CPFRC_RS07270 PF03951 Glutamine synthetase, beta-Grasp domain CPFRC_RS07270 PF00120 Glutamine synthetase, catalytic domain CPFRC_RS07340 PF18273 Type III R-M EcoP15I C-terminal domain CPFRC_RS07340 PF01555 DNA methylase CPFRC_RS07385 PF02687 FtsX-like permease family CPFRC_RS07385 PF00005 ABC transporter CPFRC_RS07385 PF12704 MacB-like periplasmic core domain CPFRC_RS07410 PF00571 CBS domain CPFRC_RS07410 PF00478 IMP dehydrogenase / GMP reductase domain CPFRC_RS07420 PF13726 Na+-H+ antiporter family CPFRC_RS07420 PF03553 Na+/H+ antiporter family CPFRC_RS07425 PF09297 NADH pyrophosphatase zinc ribbon domain CPFRC_RS07425 PF00293 NUDIX domain CPFRC_RS07430 PF00291 Pyridoxal-phosphate dependent enzyme CPFRC_RS07430 PF14821 Threonine synthase N terminus CPFRC_RS07445 PF01126 Heme oxygenase CPFRC_RS07450 PF08335 GlnD PII-uridylyltransferase CPFRC_RS07450 PF03710 Glutamate-ammonia ligase adenylyltransferase CPFRC_RS07455 PF03951 Glutamine synthetase, beta-Grasp domain CPFRC_RS07455 PF00120 Glutamine synthetase, catalytic domain CPFRC_RS07465 PF01928 CYTH domain CPFRC_RS07465 PF05235 CHAD domain CPFRC_RS07480 PF00773 RNB domain CPFRC_RS07480 PF00575 S1 RNA binding domain CPFRC_RS07480 PF08206 Ribonuclease B OB domain CPFRC_RS07480 PF17876 Cold shock domain CPFRC_RS07490 PF00300 Histidine phosphatase superfamily (branch 1) CPFRC_RS07490 PF13456 Reverse transcriptase-like CPFRC_RS07500 PF01784 NIF3 (NGG1p interacting factor 3) CPFRC_RS07505 PF00155 Aminotransferase class I and II CPFRC_RS07515 PF01451 Low molecular weight phosphotyrosine protein phosphatase CPFRC_RS07520 PF02104 SURF1 family CPFRC_RS07525 PF03186 CobD/Cbib protein CPFRC_RS07525 PF17113 Regulatory signalling modulator protein AmpE CPFRC_RS07535 PF11253 Protein of unknown function (DUF3052) CPFRC_RS07540 PF17831 Pyruvate dehydrogenase E1 component middle domain CPFRC_RS07540 PF00456 Transketolase, thiamine diphosphate binding domain CPFRC_RS07545 PF12697 Alpha/beta hydrolase family CPFRC_RS07555 PF13344 Haloacid dehalogenase-like hydrolase CPFRC_RS07570 PF03458 UPF0126 domain CPFRC_RS07595 PF08275 DNA primase catalytic core, N-terminal domain CPFRC_RS07595 PF01807 CHC2 zinc finger CPFRC_RS07595 PF08278 DNA primase DnaG DnaB-binding CPFRC_RS07595 PF10410 DnaB-helicase binding domain of primase CPFRC_RS07595 PF13662 Toprim domain CPFRC_RS07600 PF01380 SIS domain CPFRC_RS07615 PF13286 Phosphohydrolase-associated domain CPFRC_RS07615 PF01966 HD domain CPFRC_RS07640 PF03129 Anticodon binding domain CPFRC_RS07640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPFRC_RS07650 PF01022 Bacterial regulatory protein, arsR family CPFRC_RS07655 PF01475 Ferric uptake regulator family CPFRC_RS07665 PF01255 Putative undecaprenyl diphosphate synthase CPFRC_RS07670 PF02565 Recombination protein O C terminal CPFRC_RS07670 PF11967 Recombination protein O N terminal CPFRC_RS07675 PF01926 50S ribosome-binding GTPase CPFRC_RS07675 PF07650 KH domain CPFRC_RS07680 PF08543 Phosphomethylpyrimidine kinase CPFRC_RS07685 PF01595 Cyclin M transmembrane N-terminal domain CPFRC_RS07685 PF00571 CBS domain CPFRC_RS07685 PF03471 Transporter associated domain CPFRC_RS07690 PF02130 Uncharacterized protein family UPF0054 CPFRC_RS07695 PF02562 PhoH-like protein CPFRC_RS07700 PF04452 RNA methyltransferase CPFRC_RS07705 PF00684 DnaJ central domain CPFRC_RS07705 PF01556 DnaJ C terminal domain CPFRC_RS07705 PF00226 DnaJ domain CPFRC_RS07710 PF01628 HrcA protein C terminal domain CPFRC_RS07715 PF04055 Radical SAM superfamily CPFRC_RS07725 PF00501 AMP-binding enzyme CPFRC_RS07730 PF02446 4-alpha-glucanotransferase CPFRC_RS07740 PF01432 Peptidase family M3 CPFRC_RS07745 PF00135 Carboxylesterase family CPFRC_RS07750 PF00293 NUDIX domain CPFRC_RS07775 PF05525 Branched-chain amino acid transport protein CPFRC_RS07780 PF00296 Luciferase-like monooxygenase CPFRC_RS07790 PF02028 BCCT, betaine/carnitine/choline family transporter CPFRC_RS07805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPFRC_RS07810 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS07815 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS07815 PF12911 N-terminal TM domain of oligopeptide transport permease C CPFRC_RS07820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPFRC_RS07820 PF00005 ABC transporter CPFRC_RS07825 PF00561 alpha/beta hydrolase fold CPFRC_RS07830 PF01168 Alanine racemase, N-terminal domain CPFRC_RS07835 PF04143 Sulphur transport CPFRC_RS07845 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS07860 PF07690 Major Facilitator Superfamily CPFRC_RS07865 PF09383 NIL domain CPFRC_RS07865 PF00005 ABC transporter CPFRC_RS07870 PF09383 NIL domain CPFRC_RS07870 PF00005 ABC transporter CPFRC_RS07880 PF00679 Elongation factor G C-terminus CPFRC_RS07880 PF00009 Elongation factor Tu GTP binding domain CPFRC_RS07880 PF06421 GTP-binding protein LepA C-terminus CPFRC_RS07890 PF01649 Ribosomal protein S20 CPFRC_RS07895 PF01810 LysE type translocator CPFRC_RS07920 PF02645 Uncharacterised protein, DegV family COG1307 CPFRC_RS07925 PF00300 Histidine phosphatase superfamily (branch 1) CPFRC_RS07935 PF01467 Cytidylyltransferase-like CPFRC_RS07940 PF00171 Aldehyde dehydrogenase family CPFRC_RS07945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPFRC_RS07950 PF04304 Protein of unknown function (DUF454) CPFRC_RS07955 PF06826 Predicted Permease Membrane Region CPFRC_RS07955 PF02080 TrkA-C domain CPFRC_RS07960 PF01472 PUA domain CPFRC_RS07960 PF00696 Amino acid kinase family CPFRC_RS07965 PF09269 Domain of unknown function (DUF1967) CPFRC_RS07965 PF01018 GTP1/OBG CPFRC_RS07965 PF01926 50S ribosome-binding GTPase CPFRC_RS07970 PF01016 Ribosomal L27 protein CPFRC_RS07975 PF00829 Ribosomal prokaryotic L21 protein CPFRC_RS07980 PF10150 Ribonuclease E/G family CPFRC_RS07990 PF00334 Nucleoside diphosphate kinase CPFRC_RS07995 PF02423 Ornithine cyclodeaminase/mu-crystallin family CPFRC_RS08005 PF02875 Mur ligase family, glutamate ligase domain CPFRC_RS08005 PF08245 Mur ligase middle domain CPFRC_RS08010 PF08264 Anticodon-binding domain of tRNA CPFRC_RS08010 PF00133 tRNA synthetases class I (I, L, M and V) CPFRC_RS08010 PF10458 Valyl tRNA synthetase tRNA binding arm CPFRC_RS08015 PF00056 lactate/malate dehydrogenase, NAD binding domain CPFRC_RS08015 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPFRC_RS08025 PF06689 ClpX C4-type zinc finger CPFRC_RS08025 PF10431 C-terminal, D2-small domain, of ClpB protein CPFRC_RS08025 PF07724 AAA domain (Cdc48 subfamily) CPFRC_RS08030 PF00117 Glutamine amidotransferase class-I CPFRC_RS08030 PF00425 chorismate binding enzyme CPFRC_RS08030 PF04715 Anthranilate synthase component I, N terminal region CPFRC_RS08035 PF00574 Clp protease CPFRC_RS08040 PF00574 Clp protease CPFRC_RS08045 PF05698 Bacterial trigger factor protein (TF) C-terminus CPFRC_RS08045 PF05697 Bacterial trigger factor protein (TF) CPFRC_RS08070 PF02678 Pirin CPFRC_RS08070 PF05726 Pirin C-terminal cupin domain CPFRC_RS08075 PF02502 Ribose/Galactose Isomerase CPFRC_RS08080 PF01323 DSBA-like thioredoxin domain CPFRC_RS08090 PF00924 Mechanosensitive ion channel CPFRC_RS08095 PF01152 Bacterial-like globin CPFRC_RS08115 PF12848 ABC transporter CPFRC_RS08115 PF00005 ABC transporter CPFRC_RS08170 PF00005 ABC transporter CPFRC_RS08175 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CPFRC_RS08175 PF05425 Copper resistance protein D CPFRC_RS08180 PF02554 Carbon starvation protein CstA CPFRC_RS08180 PF13722 5TM C-terminal transporter carbon starvation CstA CPFRC_RS08195 PF01483 Proprotein convertase P-domain CPFRC_RS08195 PF00082 Subtilase family CPFRC_RS08200 PF08240 Alcohol dehydrogenase GroES-like domain CPFRC_RS08200 PF00107 Zinc-binding dehydrogenase CPFRC_RS08205 PF00106 short chain dehydrogenase CPFRC_RS08210 PF00929 Exonuclease CPFRC_RS08225 PF03734 L,D-transpeptidase catalytic domain CPFRC_RS08225 PF17964 Bacterial Ig domain CPFRC_RS08235 PF00107 Zinc-binding dehydrogenase CPFRC_RS08235 PF16884 N-terminal domain of oxidoreductase CPFRC_RS08240 PF00857 Isochorismatase family CPFRC_RS08255 PF00578 AhpC/TSA family CPFRC_RS08265 PF01648 4'-phosphopantetheinyl transferase superfamily CPFRC_RS08270 PF00109 Beta-ketoacyl synthase, N-terminal domain CPFRC_RS08270 PF02801 Beta-ketoacyl synthase, C-terminal domain CPFRC_RS08285 PF00196 Bacterial regulatory proteins, luxR family CPFRC_RS08285 PF00072 Response regulator receiver domain CPFRC_RS08290 PF07786 Protein of unknown function (DUF1624) CPFRC_RS08290 PF04235 Protein of unknown function (DUF418) CPFRC_RS08325 PF01725 Ham1 family CPFRC_RS08330 PF03725 3' exoribonuclease family, domain 2 CPFRC_RS08330 PF01138 3' exoribonuclease family, domain 1 CPFRC_RS08335 PF12706 Beta-lactamase superfamily domain CPFRC_RS08340 PF01177 Asp/Glu/Hydantoin racemase CPFRC_RS08345 PF01694 Rhomboid family CPFRC_RS08350 PF09438 Domain of unknown function (DUF2017) CPFRC_RS08355 PF02617 ATP-dependent Clp protease adaptor protein ClpS CPFRC_RS08360 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CPFRC_RS08360 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CPFRC_RS08365 PF13307 Helicase C-terminal domain CPFRC_RS08395 PF00115 Cytochrome C and Quinol oxidase polypeptide I CPFRC_RS08405 PF00268 Ribonucleotide reductase, small chain CPFRC_RS08410 PF00210 Ferritin-like domain CPFRC_RS08415 PF08343 Ribonucleotide reductase N-terminal CPFRC_RS08415 PF02867 Ribonucleotide reductase, barrel domain CPFRC_RS08415 PF00317 Ribonucleotide reductase, all-alpha domain CPFRC_RS08420 PF07972 NrdI Flavodoxin like CPFRC_RS08425 PF00462 Glutaredoxin CPFRC_RS08430 PF00444 Ribosomal protein L36 CPFRC_RS08435 PF02540 NAD synthase CPFRC_RS08450 PF01022 Bacterial regulatory protein, arsR family CPFRC_RS08500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPFRC_RS08500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPFRC_RS08500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPFRC_RS08500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPFRC_RS08505 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CPFRC_RS08510 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CPFRC_RS08515 PF00005 ABC transporter CPFRC_RS08515 PF02687 FtsX-like permease family CPFRC_RS08515 PF12704 MacB-like periplasmic core domain CPFRC_RS08520 PF02687 FtsX-like permease family CPFRC_RS08520 PF00005 ABC transporter CPFRC_RS08520 PF12704 MacB-like periplasmic core domain CPFRC_RS08545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPFRC_RS08550 PF01923 Cobalamin adenosyltransferase CPFRC_RS08555 PF13185 GAF domain CPFRC_RS08555 PF00196 Bacterial regulatory proteins, luxR family CPFRC_RS08565 PF00291 Pyridoxal-phosphate dependent enzyme CPFRC_RS08570 PF00132 Bacterial transferase hexapeptide (six repeats) CPFRC_RS08570 PF06426 Serine acetyltransferase, N-terminal CPFRC_RS08590 PF00465 Iron-containing alcohol dehydrogenase CPFRC_RS08610 PF01654 Cytochrome bd terminal oxidase subunit I CPFRC_RS08615 PF02322 Cytochrome bd terminal oxidase subunit II CPFRC_RS08620 PF00664 ABC transporter transmembrane region CPFRC_RS08620 PF00005 ABC transporter CPFRC_RS08625 PF00005 ABC transporter CPFRC_RS08625 PF00664 ABC transporter transmembrane region CPFRC_RS08630 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CPFRC_RS08630 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CPFRC_RS08635 PF01207 Dihydrouridine synthase (Dus) CPFRC_RS08640 PF01895 PhoU domain CPFRC_RS08650 PF00005 ABC transporter CPFRC_RS08660 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS08665 PF12849 PBP superfamily domain CPFRC_RS08670 PF00583 Acetyltransferase (GNAT) family CPFRC_RS08680 PF00781 Diacylglycerol kinase catalytic domain CPFRC_RS08685 PF08768 Domain of unknown function (DUF1794) CPFRC_RS08705 PF02769 AIR synthase related protein, C-terminal domain CPFRC_RS08705 PF00586 AIR synthase related protein, N-terminal domain CPFRC_RS08710 PF00156 Phosphoribosyl transferase domain CPFRC_RS08720 PF07972 NrdI Flavodoxin like CPFRC_RS08725 PF00268 Ribonucleotide reductase, small chain CPFRC_RS08730 PF03006 Haemolysin-III related CPFRC_RS08735 PF00586 AIR synthase related protein, N-terminal domain CPFRC_RS08735 PF02769 AIR synthase related protein, C-terminal domain CPFRC_RS08735 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CPFRC_RS08745 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CPFRC_RS08750 PF00255 Glutathione peroxidase CPFRC_RS08755 PF00326 Prolyl oligopeptidase family CPFRC_RS08755 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CPFRC_RS08765 PF01259 SAICAR synthetase CPFRC_RS08770 PF10397 Adenylosuccinate lyase C-terminus CPFRC_RS08770 PF00206 Lyase CPFRC_RS08775 PF02254 TrkA-N domain CPFRC_RS08775 PF02080 TrkA-C domain CPFRC_RS08780 PF02386 Cation transport protein CPFRC_RS08785 PF02844 Phosphoribosylglycinamide synthetase, N domain CPFRC_RS08785 PF02843 Phosphoribosylglycinamide synthetase, C domain CPFRC_RS08785 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPFRC_RS08790 PF01230 HIT domain CPFRC_RS08800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPFRC_RS08800 PF00672 HAMP domain CPFRC_RS08800 PF00512 His Kinase A (phospho-acceptor) domain CPFRC_RS08805 PF00072 Response regulator receiver domain CPFRC_RS08805 PF00486 Transcriptional regulatory protein, C terminal CPFRC_RS08825 PF00860 Permease family CPFRC_RS08835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPFRC_RS08835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPFRC_RS08835 PF00205 Thiamine pyrophosphate enzyme, central domain CPFRC_RS08865 PF00982 Glycosyltransferase family 20 CPFRC_RS08880 PF00356 Bacterial regulatory proteins, lacI family CPFRC_RS08890 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPFRC_RS08890 PF00588 SpoU rRNA Methylase family CPFRC_RS08895 PF09190 DALR domain CPFRC_RS08895 PF01406 tRNA synthetases class I (C) catalytic domain CPFRC_RS08900 PF02542 YgbB family CPFRC_RS08905 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CPFRC_RS08910 PF02559 CarD-like/TRCF domain CPFRC_RS08930 PF06745 KaiC CPFRC_RS08930 PF18073 Rubredoxin metal binding domain CPFRC_RS08940 PF00484 Carbonic anhydrase CPFRC_RS08945 PF00730 HhH-GPD superfamily base excision DNA repair protein CPFRC_RS08945 PF00633 Helix-hairpin-helix motif CPFRC_RS08960 PF00004 ATPase family associated with various cellular activities (AAA) CPFRC_RS08960 PF07724 AAA domain (Cdc48 subfamily) CPFRC_RS08960 PF02861 Clp amino terminal domain, pathogenicity island component CPFRC_RS08960 PF10431 C-terminal, D2-small domain, of ClpB protein CPFRC_RS08960 PF17871 AAA lid domain CPFRC_RS08970 PF07690 Major Facilitator Superfamily CPFRC_RS08975 PF01156 Inosine-uridine preferring nucleoside hydrolase CPFRC_RS08990 PF01336 OB-fold nucleic acid binding domain CPFRC_RS08990 PF00152 tRNA synthetases class II (D, K and N) CPFRC_RS09005 PF00375 Sodium:dicarboxylate symporter family CPFRC_RS09010 PF00171 Aldehyde dehydrogenase family CPFRC_RS09015 PF02028 BCCT, betaine/carnitine/choline family transporter CPFRC_RS09020 PF05199 GMC oxidoreductase CPFRC_RS09020 PF00732 GMC oxidoreductase CPFRC_RS09025 PF02569 Pantoate-beta-alanine ligase CPFRC_RS09045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CPFRC_RS09050 PF02152 Dihydroneopterin aldolase CPFRC_RS09055 PF00809 Pterin binding enzyme CPFRC_RS09060 PF01227 GTP cyclohydrolase I CPFRC_RS09065 PF00004 ATPase family associated with various cellular activities (AAA) CPFRC_RS09065 PF01434 Peptidase family M41 CPFRC_RS09065 PF17862 AAA+ lid domain CPFRC_RS09075 PF01171 PP-loop family CPFRC_RS09075 PF09179 TilS substrate binding domain CPFRC_RS09080 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CPFRC_RS09085 PF00719 Inorganic pyrophosphatase CPFRC_RS09090 PF01206 Sulfurtransferase TusA CPFRC_RS09090 PF00581 Rhodanese-like domain CPFRC_RS09095 PF00375 Sodium:dicarboxylate symporter family CPFRC_RS09115 PF13193 AMP-binding enzyme C-terminal domain CPFRC_RS09115 PF00668 Condensation domain CPFRC_RS09115 PF00550 Phosphopantetheine attachment site CPFRC_RS09115 PF00501 AMP-binding enzyme CPFRC_RS09120 PF03976 Polyphosphate kinase 2 (PPK2) CPFRC_RS09135 PF00118 TCP-1/cpn60 chaperonin family CPFRC_RS09140 PF01546 Peptidase family M20/M25/M40 CPFRC_RS09140 PF07687 Peptidase dimerisation domain CPFRC_RS09160 PF13244 Domain of unknown function (DUF4040) CPFRC_RS09160 PF00361 Proton-conducting membrane transporter CPFRC_RS09160 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CPFRC_RS09160 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CPFRC_RS09190 PF09594 Glycosyltransferase family 87 CPFRC_RS09195 PF04107 Glutamate-cysteine ligase family 2(GCS2) CPFRC_RS09210 PF01327 Polypeptide deformylase CPFRC_RS09215 PF00583 Acetyltransferase (GNAT) family CPFRC_RS09220 PF03372 Endonuclease/Exonuclease/phosphatase family CPFRC_RS09225 PF13396 Phospholipase_D-nuclease N-terminal CPFRC_RS09225 PF13091 PLD-like domain CPFRC_RS09235 PF00005 ABC transporter CPFRC_RS09240 PF00293 NUDIX domain CPFRC_RS09250 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPFRC_RS09255 PF16919 Protein kinase G rubredoxin domain CPFRC_RS09255 PF16918 Protein kinase G tetratricopeptide repeat CPFRC_RS09255 PF00069 Protein kinase domain CPFRC_RS09260 PF00871 Acetokinase family CPFRC_RS09265 PF01515 Phosphate acetyl/butaryl transferase CPFRC_RS09270 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPFRC_RS09285 PF02222 ATP-grasp domain CPFRC_RS09290 PF00156 Phosphoribosyl transferase domain CPFRC_RS09320 PF01578 Cytochrome C assembly protein CPFRC_RS09325 PF05140 ResB-like family CPFRC_RS09335 PF02335 Cytochrome c552 CPFRC_RS09340 PF03264 NapC/NirT cytochrome c family, N-terminal region CPFRC_RS09345 PF00709 Adenylosuccinate synthetase CPFRC_RS09375 PF00005 ABC transporter CPFRC_RS09400 PF01116 Fructose-bisphosphate aldolase class-II CPFRC_RS09415 PF00156 Phosphoribosyl transferase domain CPFRC_RS09425 PF00581 Rhodanese-like domain CPFRC_RS09430 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CPFRC_RS09430 PF01266 FAD dependent oxidoreductase CPFRC_RS09465 PF10431 C-terminal, D2-small domain, of ClpB protein CPFRC_RS09465 PF17871 AAA lid domain CPFRC_RS09465 PF07724 AAA domain (Cdc48 subfamily) CPFRC_RS09465 PF00004 ATPase family associated with various cellular activities (AAA) CPFRC_RS09465 PF02861 Clp amino terminal domain, pathogenicity island component CPFRC_RS09470 PF00005 ABC transporter CPFRC_RS09500 PF00561 alpha/beta hydrolase fold CPFRC_RS09510 PF02687 FtsX-like permease family CPFRC_RS09510 PF00005 ABC transporter CPFRC_RS09510 PF12704 MacB-like periplasmic core domain CPFRC_RS09515 PF00005 ABC transporter CPFRC_RS09520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPFRC_RS09540 PF08240 Alcohol dehydrogenase GroES-like domain CPFRC_RS09540 PF00107 Zinc-binding dehydrogenase CPFRC_RS09560 PF13411 MerR HTH family regulatory protein CPFRC_RS09565 PF00684 DnaJ central domain CPFRC_RS09565 PF01556 DnaJ C terminal domain CPFRC_RS09565 PF00226 DnaJ domain CPFRC_RS09570 PF01025 GrpE CPFRC_RS09575 PF00012 Hsp70 protein CPFRC_RS09595 PF01594 AI-2E family transporter CPFRC_RS09600 PF00005 ABC transporter CPFRC_RS09610 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS09620 PF01384 Phosphate transporter family CPFRC_RS09630 PF02665 Nitrate reductase gamma subunit CPFRC_RS09630 PF13183 4Fe-4S dicluster domain CPFRC_RS09630 PF02754 Cysteine-rich domain CPFRC_RS09645 PF00005 ABC transporter CPFRC_RS09650 PF01032 FecCD transport family CPFRC_RS09660 PF01774 UreD urease accessory protein CPFRC_RS09665 PF02492 CobW/HypB/UreG, nucleotide-binding domain CPFRC_RS09670 PF01730 UreF CPFRC_RS09675 PF02814 UreE urease accessory protein, N-terminal domain CPFRC_RS09675 PF05194 UreE urease accessory protein, C-terminal domain CPFRC_RS09680 PF01979 Amidohydrolase family CPFRC_RS09680 PF00449 Urease alpha-subunit, N-terminal domain CPFRC_RS09685 PF00699 Urease beta subunit CPFRC_RS09690 PF00547 Urease, gamma subunit CPFRC_RS09715 PF00152 tRNA synthetases class II (D, K and N) CPFRC_RS09715 PF16995 Transmembrane region of lysyl-tRNA synthetase CPFRC_RS09715 PF01336 OB-fold nucleic acid binding domain CPFRC_RS09715 PF09924 Uncharacterised conserved protein (DUF2156) CPFRC_RS09720 PF12697 Alpha/beta hydrolase family CPFRC_RS09735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CPFRC_RS09735 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CPFRC_RS09735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CPFRC_RS09740 PF00692 dUTPase CPFRC_RS09750 PF00171 Aldehyde dehydrogenase family CPFRC_RS09760 PF00933 Glycosyl hydrolase family 3 N terminal domain CPFRC_RS09770 PF11847 Alpha-(1->3)-arabinofuranosyltransferase CPFRC_RS09775 PF01757 Acyltransferase family CPFRC_RS09780 PF11271 Porin PorA CPFRC_RS09790 PF00534 Glycosyl transferases group 1 CPFRC_RS09790 PF13439 Glycosyltransferase Family 4 CPFRC_RS09795 PF08241 Methyltransferase domain CPFRC_RS09800 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CPFRC_RS09800 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CPFRC_RS09805 PF02390 Putative methyltransferase CPFRC_RS09815 PF03176 MMPL family CPFRC_RS09835 PF09335 SNARE associated Golgi protein CPFRC_RS09840 PF01039 Carboxyl transferase domain CPFRC_RS09845 PF02801 Beta-ketoacyl synthase, C-terminal domain CPFRC_RS09845 PF08659 KR domain CPFRC_RS09845 PF16197 Ketoacyl-synthetase C-terminal extension CPFRC_RS09845 PF00698 Acyl transferase domain CPFRC_RS09845 PF00109 Beta-ketoacyl synthase, N-terminal domain CPFRC_RS09845 PF14765 Polyketide synthase dehydratase CPFRC_RS09845 PF00550 Phosphopantetheine attachment site CPFRC_RS09850 PF00501 AMP-binding enzyme CPFRC_RS09865 PF08310 LGFP repeat CPFRC_RS09865 PF00756 Putative esterase CPFRC_RS09875 PF00756 Putative esterase CPFRC_RS09885 PF01040 UbiA prenyltransferase family CPFRC_RS09890 PF01569 PAP2 superfamily CPFRC_RS09895 PF17994 Galactofuranosyltransferase 2 N-terminal CPFRC_RS09905 PF01569 PAP2 superfamily CPFRC_RS09915 PF03009 Glycerophosphoryl diester phosphodiesterase family CPFRC_RS09920 PF07690 Major Facilitator Superfamily CPFRC_RS09925 PF03275 UDP-galactopyranose mutase CPFRC_RS09930 PF00005 ABC transporter CPFRC_RS09935 PF01032 FecCD transport family CPFRC_RS09940 PF01497 Periplasmic binding protein CPFRC_RS09960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPFRC_RS09960 PF02403 Seryl-tRNA synthetase N-terminal domain CPFRC_RS09965 PF00392 Bacterial regulatory proteins, gntR family CPFRC_RS09965 PF07702 UTRA domain CPFRC_RS09990 PF01425 Amidase CPFRC_RS10000 PF03816 Cell envelope-related transcriptional attenuator domain CPFRC_RS10025 PF03009 Glycerophosphoryl diester phosphodiesterase family CPFRC_RS10030 PF07670 Nucleoside recognition CPFRC_RS10030 PF07662 Na+ dependent nucleoside transporter C-terminus CPFRC_RS10030 PF01773 Na+ dependent nucleoside transporter N-terminus CPFRC_RS10035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPFRC_RS10040 PF02885 Glycosyl transferase family, helical bundle domain CPFRC_RS10040 PF00591 Glycosyl transferase family, a/b domain CPFRC_RS10040 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CPFRC_RS10045 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPFRC_RS10045 PF00056 lactate/malate dehydrogenase, NAD binding domain CPFRC_RS10050 PF01625 Peptide methionine sulfoxide reductase CPFRC_RS10055 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CPFRC_RS10055 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CPFRC_RS10060 PF03358 NADPH-dependent FMN reductase CPFRC_RS10065 PF07690 Major Facilitator Superfamily CPFRC_RS10085 PF09594 Glycosyltransferase family 87 CPFRC_RS10105 PF00072 Response regulator receiver domain CPFRC_RS10105 PF00196 Bacterial regulatory proteins, luxR family CPFRC_RS10110 PF07730 Histidine kinase CPFRC_RS10110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPFRC_RS10120 PF04203 Sortase domain CPFRC_RS10125 PF02096 60Kd inner membrane protein CPFRC_RS10145 PF00582 Universal stress protein family CPFRC_RS10150 PF00849 RNA pseudouridylate synthase CPFRC_RS10150 PF01479 S4 domain CPFRC_RS10180 PF00005 ABC transporter CPFRC_RS10200 PF00085 Thioredoxin CPFRC_RS10210 PF00403 Heavy-metal-associated domain CPFRC_RS10215 PF07690 Major Facilitator Superfamily CPFRC_RS10220 PF03796 DnaB-like helicase C terminal domain CPFRC_RS10220 PF00772 DnaB-like helicase N terminal domain CPFRC_RS10225 PF00723 Glycosyl hydrolases family 15 CPFRC_RS10235 PF03948 Ribosomal protein L9, C-terminal domain CPFRC_RS10235 PF01281 Ribosomal protein L9, N-terminal domain CPFRC_RS10240 PF00436 Single-strand binding protein family CPFRC_RS10245 PF01250 Ribosomal protein S6 CPFRC_RS10265 PF00905 Penicillin binding protein transpeptidase domain CPFRC_RS10265 PF00912 Transglycosylase CPFRC_RS10280 PF00582 Universal stress protein family CPFRC_RS10300 PF09335 SNARE associated Golgi protein CPFRC_RS10305 PF00210 Ferritin-like domain CPFRC_RS10310 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CPFRC_RS10310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CPFRC_RS10315 PF01256 Carbohydrate kinase CPFRC_RS10315 PF03853 YjeF-related protein N-terminus CPFRC_RS10320 PF04892 VanZ like family CPFRC_RS10330 PF13603 Leucyl-tRNA synthetase, Domain 2 CPFRC_RS10330 PF09334 tRNA synthetases class I (M) CPFRC_RS10330 PF08264 Anticodon-binding domain of tRNA CPFRC_RS10335 PF00005 ABC transporter CPFRC_RS10335 PF12704 MacB-like periplasmic core domain CPFRC_RS10335 PF02687 FtsX-like permease family CPFRC_RS10340 PF02687 FtsX-like permease family CPFRC_RS10355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPFRC_RS10355 PF07730 Histidine kinase CPFRC_RS10360 PF00072 Response regulator receiver domain CPFRC_RS10360 PF00196 Bacterial regulatory proteins, luxR family CPFRC_RS10370 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CPFRC_RS10375 PF01979 Amidohydrolase family CPFRC_RS10380 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CPFRC_RS10385 PF00480 ROK family CPFRC_RS10390 PF00392 Bacterial regulatory proteins, gntR family CPFRC_RS10390 PF07729 FCD domain CPFRC_RS10395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPFRC_RS10400 PF00528 Binding-protein-dependent transport system inner membrane component CPFRC_RS10405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPFRC_RS10405 PF00005 ABC transporter CPFRC_RS10410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPFRC_RS10410 PF00005 ABC transporter CPFRC_RS10415 PF00701 Dihydrodipicolinate synthetase family CPFRC_RS10450 PF08903 Domain of unknown function (DUF1846) CPFRC_RS10455 PF07411 Domain of unknown function (DUF1508) CPFRC_RS10470 PF00375 Sodium:dicarboxylate symporter family CPFRC_RS10480 PF01593 Flavin containing amine oxidoreductase CPFRC_RS10490 PF04715 Anthranilate synthase component I, N terminal region CPFRC_RS10490 PF00425 chorismate binding enzyme CPFRC_RS10495 PF00117 Glutamine amidotransferase class-I CPFRC_RS10500 PF00591 Glycosyl transferase family, a/b domain CPFRC_RS10500 PF02885 Glycosyl transferase family, helical bundle domain CPFRC_RS10505 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CPFRC_RS10505 PF00218 Indole-3-glycerol phosphate synthase CPFRC_RS10510 PF00291 Pyridoxal-phosphate dependent enzyme CPFRC_RS10515 PF00290 Tryptophan synthase alpha chain CPFRC_RS10525 PF13593 SBF-like CPA transporter family (DUF4137) CPFRC_RS10535 PF05437 Branched-chain amino acid transport protein (AzlD) CPFRC_RS10540 PF03591 AzlC protein CPFRC_RS10545 PF02622 Uncharacterized ACR, COG1678 CPFRC_RS10550 PF01743 Poly A polymerase head domain CPFRC_RS10550 PF12627 Probable RNA and SrmB- binding site of polymerase A CPFRC_RS10550 PF13735 tRNA nucleotidyltransferase domain 2 putative CPFRC_RS10555 PF00293 NUDIX domain CPFRC_RS10565 PF03023 Lipid II flippase MurJ CPFRC_RS10570 PF08281 Sigma-70, region 4 CPFRC_RS10570 PF04542 Sigma-70 region 2 CPFRC_RS10575 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPFRC_RS10580 PF00085 Thioredoxin CPFRC_RS10585 PF01520 N-acetylmuramoyl-L-alanine amidase CPFRC_RS10585 PF01471 Putative peptidoglycan binding domain CPFRC_RS10595 PF02195 ParB-like nuclease domain CPFRC_RS10595 PF17762 HTH domain found in ParB protein CPFRC_RS10600 PF13614 AAA domain CPFRC_RS10605 PF02527 rRNA small subunit methyltransferase G CPFRC_RS10610 PF02096 60Kd inner membrane protein CPFRC_RS10615 PF01809 Putative membrane protein insertion efficiency factor CPFRC_RS10620 PF00825 Ribonuclease P CPFRC_RS10625 PF00468 Ribosomal protein L34