CpMEX31_RS00005	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CpMEX31_RS00015	SM00480	DNA polymerase III beta subunit
CpMEX31_RS00030	SM00387	Histidine kinase-like ATPases
CpMEX31_RS00030	SM00433	TopoisomeraseII
CpMEX31_RS00050	SM00434	DNA Topoisomerase IV
CpMEX31_RS00100	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS00150	SM00487	DEAD-like helicases superfamily
CpMEX31_RS00155	SM01101	CpMEX31_RS00155
CpMEX31_RS00190	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS00215	SM00220	Serine/Threonine protein kinases, catalytic domain
CpMEX31_RS00215	SM00740	CpMEX31_RS00215
CpMEX31_RS00220	SM00220	Serine/Threonine protein kinases, catalytic domain
CpMEX31_RS00235	SM00331	Sigma factor PP2C-like phosphatases
CpMEX31_RS00235	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CpMEX31_RS00240	SM00240	Forkhead associated domain
CpMEX31_RS00245	SM00240	Forkhead associated domain
CpMEX31_RS00295	SM00924	MgtE intracellular N domain
CpMEX31_RS00300	SM00642	Alpha-amylase domain
CpMEX31_RS00355	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS00375	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpMEX31_RS00375	SM00876	Biotin and Thiamin Synthesis associated domain
CpMEX31_RS00400	SM00641	Glycosyl hydrolases family 25
CpMEX31_RS00455	SM00347	helix_turn_helix multiple antibiotic resistance protein
CpMEX31_RS00495	SM00487	DEAD-like helicases superfamily
CpMEX31_RS00495	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS00495	SM00847	Helicase associated domain (HA2)  Add an annotation
CpMEX31_RS00510	SM00822	CpMEX31_RS00510
CpMEX31_RS00540	SM00507	HNH nucleases
CpMEX31_RS00635	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS00655	SM00014	Acid phosphatase homologues
CpMEX31_RS00660	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS00675	SM00829	Enoylreductase
CpMEX31_RS00690	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CpMEX31_RS00705	SM00752	Horizontally Transferred TransMembrane Domain
CpMEX31_RS00740	SM01061	CAT RNA binding domain
CpMEX31_RS00775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpMEX31_RS00835	SM00829	Enoylreductase
CpMEX31_RS00865	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS00875	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CpMEX31_RS00875	SM00493	CpMEX31_RS00875
CpMEX31_RS00895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpMEX31_RS00895	SM00895	CpMEX31_RS00895
CpMEX31_RS00930	SM00917	LeuA allosteric (dimerisation) domain
CpMEX31_RS00950	SM01133	CpMEX31_RS00950
CpMEX31_RS00995	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CpMEX31_RS01005	SM01060	CpMEX31_RS01005
CpMEX31_RS01035	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS01055	SM00448	cheY-homologous receiver domain
CpMEX31_RS01055	SM00862	Transcriptional regulatory protein, C terminal
CpMEX31_RS01060	SM00387	Histidine kinase-like ATPases
CpMEX31_RS01060	SM00388	His Kinase A (phosphoacceptor) domain
CpMEX31_RS01135	SM00849	Metallo-beta-lactamase superfamily
CpMEX31_RS01140	SM00100	Cyclic nucleotide-monophosphate binding domain
CpMEX31_RS01140	SM00419	helix_turn_helix, cAMP Regulatory protein
CpMEX31_RS01150	SM00478	endonuclease III
CpMEX31_RS01150	SM00525	CpMEX31_RS01150
CpMEX31_RS01230	SM00487	DEAD-like helicases superfamily
CpMEX31_RS01230	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS01235	SM00357	Cold shock protein domain
CpMEX31_RS01240	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CpMEX31_RS01240	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CpMEX31_RS01240	SM00493	CpMEX31_RS01240
CpMEX31_RS01250	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CpMEX31_RS01250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CpMEX31_RS01255	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS01320	SM00530	Helix-turn-helix XRE-family like proteins 
CpMEX31_RS01405	SM00855	Phosphoglycerate mutase family
CpMEX31_RS01410	SM00387	Histidine kinase-like ATPases
CpMEX31_RS01410	SM00388	His Kinase A (phosphoacceptor) domain
CpMEX31_RS01415	SM00448	cheY-homologous receiver domain
CpMEX31_RS01415	SM00862	Transcriptional regulatory protein, C terminal
CpMEX31_RS01450	SM01155	CpMEX31_RS01450
CpMEX31_RS01490	SM01004	Delta-aminolevulinic acid dehydratase
CpMEX31_RS01525	SM00855	Phosphoglycerate mutase family
CpMEX31_RS01550	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS01600	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CpMEX31_RS01665	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CpMEX31_RS01670	SM00649	Ribosomal protein L11/L12
CpMEX31_RS01720	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS01745	SM00663	RNA polymerase I subunit A N-terminus
CpMEX31_RS01755	SM00421	helix_turn_helix, Lux Regulon
CpMEX31_RS01755	SM00448	cheY-homologous receiver domain
CpMEX31_RS01765	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS01810	SM00838	Elongation factor G C-terminus
CpMEX31_RS01810	SM00889	Elongation factor G, domain IV
CpMEX31_RS01855	SM01403	CpMEX31_RS01855
CpMEX31_RS01875	SM01382	CpMEX31_RS01875
CpMEX31_RS01875	SM01383	CpMEX31_RS01875
CpMEX31_RS01890	SM00322	K homology RNA-binding domain
CpMEX31_RS01915	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS01930	SM01374	CpMEX31_RS01930
CpMEX31_RS01935	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CpMEX31_RS01955	SM00870	CpMEX31_RS01955
CpMEX31_RS01960	SM00450	Rhodanese Homology Domain
CpMEX31_RS01965	SM00852	Probable molybdopterin binding domain
CpMEX31_RS01975	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS02000	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CpMEX31_RS02015	SM00852	Probable molybdopterin binding domain
CpMEX31_RS02030	SM00852	Probable molybdopterin binding domain
CpMEX31_RS02035	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpMEX31_RS02115	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS02145	SM00316	Ribosomal protein S1-like RNA-binding domain
CpMEX31_RS02160	SM00363	S4 RNA-binding domain
CpMEX31_RS02160	SM01390	CpMEX31_RS02160
CpMEX31_RS02165	SM00662	RNA polymerases D
CpMEX31_RS02200	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS02255	SM01005	Alanine racemase, C-terminal domain
CpMEX31_RS02295	SM00883	Chaperonin 10 Kd subunit
CpMEX31_RS02325	SM00116	Domain in cystathionine beta-synthase and other proteins.
CpMEX31_RS02325	SM01240	CpMEX31_RS02325
CpMEX31_RS02330	SM01240	CpMEX31_RS02330
CpMEX31_RS02360	SM00421	helix_turn_helix, Lux Regulon
CpMEX31_RS02360	SM00448	cheY-homologous receiver domain
CpMEX31_RS02380	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS02415	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS02430	SM00529	Helix-turn-helix diphteria tox regulatory element
CpMEX31_RS02430	SM00899	CpMEX31_RS02430
CpMEX31_RS02450	SM00507	HNH nucleases
CpMEX31_RS02480	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS02560	SM00530	Helix-turn-helix XRE-family like proteins 
CpMEX31_RS02580	SM00878	Biotin carboxylase C-terminal domain
CpMEX31_RS02595	SM00878	Biotin carboxylase C-terminal domain
CpMEX31_RS02600	SM00450	Rhodanese Homology Domain
CpMEX31_RS02630	SM00354	helix_turn _helix lactose operon repressor
CpMEX31_RS02665	SM01001	AIR carboxylase
CpMEX31_RS02760	SM00996	S-adenosyl-L-homocysteine hydrolase
CpMEX31_RS02760	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CpMEX31_RS02770	SM00448	cheY-homologous receiver domain
CpMEX31_RS02770	SM00862	Transcriptional regulatory protein, C terminal
CpMEX31_RS02775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CpMEX31_RS02775	SM00387	Histidine kinase-like ATPases
CpMEX31_RS02775	SM00388	His Kinase A (phosphoacceptor) domain
CpMEX31_RS02780	SM00909	Sporulation and spore germination
CpMEX31_RS02795	SM00957	SecA DEAD-like domain
CpMEX31_RS02795	SM00958	SecA preprotein cross-linking domain
CpMEX31_RS02875	SM00487	DEAD-like helicases superfamily
CpMEX31_RS02875	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS02915	SM00341	Helicase and RNase D C-terminal
CpMEX31_RS02935	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CpMEX31_RS03000	SM00823	Phosphopantetheine attachment site
CpMEX31_RS03055	SM00937	CpMEX31_RS03055
CpMEX31_RS03075	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS03110	SM00947	Carbonic anhydrase
CpMEX31_RS03135	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS03170	SM00487	DEAD-like helicases superfamily
CpMEX31_RS03170	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS03190	SM00357	Cold shock protein domain
CpMEX31_RS03335	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS03385	SM00487	DEAD-like helicases superfamily
CpMEX31_RS03385	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS03395	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CpMEX31_RS03395	SM01232	CpMEX31_RS03395
CpMEX31_RS03415	SM00830	Chorismate mutase type II
CpMEX31_RS03440	SM00798	AICARFT/IMPCHase bienzyme
CpMEX31_RS03440	SM00851	MGS-like domain
CpMEX31_RS03445	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS03450	SM00062	Bacterial periplasmic substrate-binding proteins
CpMEX31_RS03510	SM00448	cheY-homologous receiver domain
CpMEX31_RS03510	SM00862	Transcriptional regulatory protein, C terminal
CpMEX31_RS03515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CpMEX31_RS03515	SM00387	Histidine kinase-like ATPases
CpMEX31_RS03515	SM00388	His Kinase A (phosphoacceptor) domain
CpMEX31_RS03520	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CpMEX31_RS03525	SM00852	Probable molybdopterin binding domain
CpMEX31_RS03555	SM00852	Probable molybdopterin binding domain
CpMEX31_RS03625	SM01208	CpMEX31_RS03625
CpMEX31_RS03630	SM00650	Ribosomal RNA adenine dimethylases
CpMEX31_RS03640	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS03685	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CpMEX31_RS03705	SM00822	CpMEX31_RS03705
CpMEX31_RS03735	SM00642	Alpha-amylase domain
CpMEX31_RS03740	SM01400	CpMEX31_RS03740
CpMEX31_RS03770	SM00487	DEAD-like helicases superfamily
CpMEX31_RS03770	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS03770	SM00982	CpMEX31_RS03770
CpMEX31_RS03770	SM01058	CarD-like/TRCF domain
CpMEX31_RS03790	SM01192	CpMEX31_RS03790
CpMEX31_RS03790	SM01193	CpMEX31_RS03790
CpMEX31_RS03820	SM00342	helix_turn_helix, arabinose operon control protein
CpMEX31_RS03980	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS03985	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS03990	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS04010	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS04045	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS04050	SM00020	Trypsin-like serine protease
CpMEX31_RS04105	SM00507	HNH nucleases
CpMEX31_RS04165	SM00640	Glycosyl hydrolases family 32
CpMEX31_RS04215	SM00924	MgtE intracellular N domain
CpMEX31_RS04225	SM00861	Transketolase, pyrimidine binding domain
CpMEX31_RS04230	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS04290	SM00487	DEAD-like helicases superfamily
CpMEX31_RS04290	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS04320	SM00487	DEAD-like helicases superfamily
CpMEX31_RS04320	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS04340	SM00867	YceI-like domain 
CpMEX31_RS04345	SM00347	helix_turn_helix multiple antibiotic resistance protein
CpMEX31_RS04360	SM00420	helix_turn_helix, Deoxyribose operon repressor
CpMEX31_RS04360	SM01134	CpMEX31_RS04360
CpMEX31_RS04395	SM00836	DALR anticodon binding domain
CpMEX31_RS04395	SM01016	Arginyl tRNA synthetase N terminal dom
CpMEX31_RS04425	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS04425	SM00959	Rho termination factor, N-terminal domain
CpMEX31_RS04430	SM00937	CpMEX31_RS04430
CpMEX31_RS04485	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS04525	SM00642	Alpha-amylase domain
CpMEX31_RS04530	SM00642	Alpha-amylase domain
CpMEX31_RS04535	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS04550	SM00893	Electron transfer flavoprotein domain
CpMEX31_RS04555	SM00893	Electron transfer flavoprotein domain
CpMEX31_RS04580	SM00479	CpMEX31_RS04580
CpMEX31_RS04585	SM00292	breast cancer carboxy-terminal domain
CpMEX31_RS04585	SM00532	Ligase N family
CpMEX31_RS04625	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS04640	SM00845	GatB domain
CpMEX31_RS04720	SM01329	CpMEX31_RS04720
CpMEX31_RS04725	SM00100	Cyclic nucleotide-monophosphate binding domain
CpMEX31_RS04725	SM00116	Domain in cystathionine beta-synthase and other proteins.
CpMEX31_RS04730	SM00479	CpMEX31_RS04730
CpMEX31_RS04770	SM01110	CpMEX31_RS04770
CpMEX31_RS04780	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpMEX31_RS04780	SM00876	Biotin and Thiamin Synthesis associated domain
CpMEX31_RS04785	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CpMEX31_RS04790	SM00346	helix_turn_helix isocitrate lyase regulation
CpMEX31_RS04805	SM00855	Phosphoglycerate mutase family
CpMEX31_RS04830	SM00986	Uracil DNA glycosylase superfamily
CpMEX31_RS04830	SM00987	UreE urease accessory protein, C-terminal domain 
CpMEX31_RS04835	SM01120	CpMEX31_RS04835
CpMEX31_RS04835	SM01121	CpMEX31_RS04835
CpMEX31_RS04840	SM00487	DEAD-like helicases superfamily
CpMEX31_RS04840	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS04870	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS04880	SM00062	Bacterial periplasmic substrate-binding proteins
CpMEX31_RS04915	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CpMEX31_RS04915	SM00474	3'-5' exonuclease
CpMEX31_RS04915	SM00475	5'-3' exonuclease
CpMEX31_RS04915	SM00482	DNA polymerase A domain
CpMEX31_RS04925	SM00316	Ribosomal protein S1-like RNA-binding domain
CpMEX31_RS04945	SM00487	DEAD-like helicases superfamily
CpMEX31_RS04945	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS04955	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS04965	SM00849	Metallo-beta-lactamase superfamily
CpMEX31_RS04995	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CpMEX31_RS05005	SM00873	B3/4 domain
CpMEX31_RS05005	SM00874	tRNA synthetase B5 domain
CpMEX31_RS05005	SM00896	Ferredoxin-fold anticodon binding domain
CpMEX31_RS05010	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CpMEX31_RS05055	SM00363	S4 RNA-binding domain
CpMEX31_RS05090	SM00363	S4 RNA-binding domain
CpMEX31_RS05160	SM00363	S4 RNA-binding domain
CpMEX31_RS05210	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS05240	SM00957	SecA DEAD-like domain
CpMEX31_RS05240	SM00958	SecA preprotein cross-linking domain
CpMEX31_RS05245	SM00240	Forkhead associated domain
CpMEX31_RS05250	SM00422	helix_turn_helix, mercury resistance
CpMEX31_RS05260	SM00422	helix_turn_helix, mercury resistance
CpMEX31_RS05265	SM00327	von Willebrand factor (vWF) type A domain
CpMEX31_RS05280	SM01091	Transporter associated domain
CpMEX31_RS05285	SM00487	DEAD-like helicases superfamily
CpMEX31_RS05285	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS05290	SM01350	CpMEX31_RS05290
CpMEX31_RS05330	SM00867	YceI-like domain 
CpMEX31_RS05405	SM00487	DEAD-like helicases superfamily
CpMEX31_RS05405	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS05405	SM01142	CpMEX31_RS05405
CpMEX31_RS05445	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS05500	SM01018	B12 binding domain
CpMEX31_RS05555	SM01120	CpMEX31_RS05555
CpMEX31_RS05610	SM00244	prohibitin homologues
CpMEX31_RS05685	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS05730	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS05750	SM00861	Transketolase, pyrimidine binding domain
CpMEX31_RS05795	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CpMEX31_RS05815	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CpMEX31_RS05815	SM00465	GIY-YIG type nucleases (URI domain)
CpMEX31_RS05880	SM01409	CpMEX31_RS05880
CpMEX31_RS05885	SM00072	Guanylate kinase homologues.
CpMEX31_RS05895	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CpMEX31_RS05900	SM00851	MGS-like domain
CpMEX31_RS05900	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CpMEX31_RS05905	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CpMEX31_RS05945	SM00841	Elongation factor P, C-terminal
CpMEX31_RS05945	SM01185	CpMEX31_RS05945
CpMEX31_RS05990	SM00732	Likely ribonuclease with RNase H fold.
CpMEX31_RS05995	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CpMEX31_RS06000	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS06020	SM00487	DEAD-like helicases superfamily
CpMEX31_RS06020	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS06075	SM00849	Metallo-beta-lactamase superfamily
CpMEX31_RS06095	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CpMEX31_RS06095	SM00954	Region found in RelA / SpoT proteins
CpMEX31_RS06120	SM01323	CpMEX31_RS06120
CpMEX31_RS06125	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS06190	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CpMEX31_RS06260	SM00474	3'-5' exonuclease
CpMEX31_RS06265	SM00861	Transketolase, pyrimidine binding domain
CpMEX31_RS06320	SM00487	DEAD-like helicases superfamily
CpMEX31_RS06350	SM00529	Helix-turn-helix diphteria tox regulatory element
CpMEX31_RS06370	SM00487	DEAD-like helicases superfamily
CpMEX31_RS06370	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS06395	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS06395	SM00487	DEAD-like helicases superfamily
CpMEX31_RS06395	SM00490	helicase superfamily c-terminal domain
CpMEX31_RS06395	SM00847	Helicase associated domain (HA2)  Add an annotation
CpMEX31_RS06415	SM00420	helix_turn_helix, Deoxyribose operon repressor
CpMEX31_RS06415	SM01134	CpMEX31_RS06415
CpMEX31_RS06425	SM00420	helix_turn_helix, Deoxyribose operon repressor
CpMEX31_RS06425	SM01134	CpMEX31_RS06425
CpMEX31_RS06510	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpMEX31_RS06520	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS06535	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS06550	SM00530	Helix-turn-helix XRE-family like proteins 
CpMEX31_RS06575	SM00843	CpMEX31_RS06575
CpMEX31_RS06585	SM00849	Metallo-beta-lactamase superfamily
CpMEX31_RS06590	SM01130	CpMEX31_RS06590
CpMEX31_RS06605	SM00316	Ribosomal protein S1-like RNA-binding domain
CpMEX31_RS06605	SM00322	K homology RNA-binding domain
CpMEX31_RS06610	SM01387	CpMEX31_RS06610
CpMEX31_RS06620	SM00904	Riboflavin kinase
CpMEX31_RS06665	SM00322	K homology RNA-binding domain
CpMEX31_RS06700	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CpMEX31_RS06720	SM00327	von Willebrand factor (vWF) type A domain
CpMEX31_RS06725	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS06770	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CpMEX31_RS06840	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS06865	SM00316	Ribosomal protein S1-like RNA-binding domain
CpMEX31_RS06865	SM00732	Likely ribonuclease with RNase H fold.
CpMEX31_RS06900	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS06900	SM00962	SRP54-type protein, GTPase domain
CpMEX31_RS06900	SM00963	SRP54-type protein, helical bundle domain
CpMEX31_RS06905	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CpMEX31_RS06910	SM00938	Nitrogen regulatory protein P-II
CpMEX31_RS06915	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS06915	SM00962	SRP54-type protein, GTPase domain
CpMEX31_RS06915	SM00963	SRP54-type protein, helical bundle domain
CpMEX31_RS06940	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CpMEX31_RS06940	SM01232	CpMEX31_RS06940
CpMEX31_RS06945	SM00358	Double-stranded RNA binding motif
CpMEX31_RS06945	SM00535	Ribonuclease III family
CpMEX31_RS06965	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CpMEX31_RS06965	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CpMEX31_RS06970	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CpMEX31_RS07105	SM00642	Alpha-amylase domain
CpMEX31_RS07110	SM00479	CpMEX31_RS07110
CpMEX31_RS07120	SM00954	Region found in RelA / SpoT proteins
CpMEX31_RS07125	SM00363	S4 RNA-binding domain
CpMEX31_RS07145	SM00481	DNA polymerase alpha chain like domain
CpMEX31_RS07180	SM00870	CpMEX31_RS07180
CpMEX31_RS07225	SM00864	Tubulin/FtsZ family, GTPase domain
CpMEX31_RS07225	SM00865	Tubulin/FtsZ family, C-terminal domain
CpMEX31_RS07350	SM00563	Phosphate acyltransferases
CpMEX31_RS07480	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpMEX31_RS07495	SM01230	CpMEX31_RS07495
CpMEX31_RS07555	SM00116	Domain in cystathionine beta-synthase and other proteins.
CpMEX31_RS07555	SM01240	CpMEX31_RS07555
CpMEX31_RS07600	SM01230	CpMEX31_RS07600
CpMEX31_RS07610	SM00880	CpMEX31_RS07610
CpMEX31_RS07610	SM01118	CpMEX31_RS07610
CpMEX31_RS07625	SM00955	CpMEX31_RS07625
CpMEX31_RS07635	SM00855	Phosphoglycerate mutase family
CpMEX31_RS07660	SM00226	Low molecular weight phosphatase family
CpMEX31_RS07740	SM00400	zinc finger
CpMEX31_RS07740	SM00493	CpMEX31_RS07740
CpMEX31_RS07740	SM00766	DNA primase DnaG DnaB-binding
CpMEX31_RS07760	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CpMEX31_RS07795	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CpMEX31_RS07830	SM01091	Transporter associated domain
CpMEX31_RS07850	SM00271	DnaJ molecular chaperone homology domain
CpMEX31_RS07860	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpMEX31_RS07915	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS07930	SM00507	HNH nucleases
CpMEX31_RS07965	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS08005	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS08010	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS08015	SM00838	Elongation factor G C-terminus
CpMEX31_RS08035	SM00248	ankyrin repeats
CpMEX31_RS08050	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CpMEX31_RS08060	SM00855	Phosphoglycerate mutase family
CpMEX31_RS08095	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CpMEX31_RS08115	SM00316	Ribosomal protein S1-like RNA-binding domain
CpMEX31_RS08125	SM00562	CpMEX31_RS08125
CpMEX31_RS08160	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS08160	SM00994	ClpX C4-type zinc finger
CpMEX31_RS08160	SM01086	C-terminal, D2-small domain, of ClpB protein
CpMEX31_RS08250	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS08305	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS08335	SM00829	Enoylreductase
CpMEX31_RS08340	SM00822	CpMEX31_RS08340
CpMEX31_RS08345	SM00479	CpMEX31_RS08345
CpMEX31_RS08355	SM01130	CpMEX31_RS08355
CpMEX31_RS08395	SM00857	Resolvase, N terminal domain
CpMEX31_RS08405	SM00829	Enoylreductase
CpMEX31_RS08440	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CpMEX31_RS08455	SM00421	helix_turn_helix, Lux Regulon
CpMEX31_RS08455	SM00448	cheY-homologous receiver domain
CpMEX31_RS08530	SM00487	DEAD-like helicases superfamily
CpMEX31_RS08530	SM00491	CpMEX31_RS08530
CpMEX31_RS08710	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CpMEX31_RS08770	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS08805	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CpMEX31_RS08805	SM00421	helix_turn_helix, Lux Regulon
CpMEX31_RS08870	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS08875	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS08900	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS08930	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CpMEX31_RS08990	SM01211	CpMEX31_RS08990
CpMEX31_RS09020	SM00998	Adenylosuccinate lyase C-terminus
CpMEX31_RS09035	SM01209	CpMEX31_RS09035
CpMEX31_RS09035	SM01210	CpMEX31_RS09035
CpMEX31_RS09050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CpMEX31_RS09050	SM00387	Histidine kinase-like ATPases
CpMEX31_RS09050	SM00388	His Kinase A (phosphoacceptor) domain
CpMEX31_RS09055	SM00448	cheY-homologous receiver domain
CpMEX31_RS09055	SM00862	Transcriptional regulatory protein, C terminal
CpMEX31_RS09130	SM00354	helix_turn _helix lactose operon repressor
CpMEX31_RS09140	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CpMEX31_RS09145	SM00840	CpMEX31_RS09145
CpMEX31_RS09160	SM01058	CarD-like/TRCF domain
CpMEX31_RS09180	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS09190	SM00947	Carbonic anhydrase
CpMEX31_RS09195	SM00478	endonuclease III
CpMEX31_RS09210	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS09210	SM01086	C-terminal, D2-small domain, of ClpB protein
CpMEX31_RS09245	SM00244	prohibitin homologues
CpMEX31_RS09300	SM00905	Dihydroneopterin aldolase
CpMEX31_RS09315	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS09340	SM00450	Rhodanese Homology Domain
CpMEX31_RS09360	SM00347	helix_turn_helix multiple antibiotic resistance protein
CpMEX31_RS09365	SM00823	Phosphopantetheine attachment site
CpMEX31_RS09480	SM00155	Phospholipase D. Active site motifs.
CpMEX31_RS09490	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS09505	SM00062	Bacterial periplasmic substrate-binding proteins
CpMEX31_RS09510	SM00220	Serine/Threonine protein kinases, catalytic domain
CpMEX31_RS09585	SM00028	Tetratricopeptide repeats
CpMEX31_RS09600	SM00788	Adenylosuccinate synthetase
CpMEX31_RS09630	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS09680	SM00450	Rhodanese Homology Domain
CpMEX31_RS09720	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS09720	SM01086	C-terminal, D2-small domain, of ClpB protein
CpMEX31_RS09725	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS09785	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS09810	SM00829	Enoylreductase
CpMEX31_RS09830	SM00422	helix_turn_helix, mercury resistance
CpMEX31_RS09835	SM00271	DnaJ molecular chaperone homology domain
CpMEX31_RS09850	SM00327	von Willebrand factor (vWF) type A domain
CpMEX31_RS09870	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS09875	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS09910	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CpMEX31_RS09915	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS09945	SM00988	UreE urease accessory protein, N-terminal domain
CpMEX31_RS10005	SM00984	UDP binding domain
CpMEX31_RS10115	SM00823	Phosphopantetheine attachment site
CpMEX31_RS10115	SM00824	Thioesterase
CpMEX31_RS10115	SM00825	Beta-ketoacyl synthase
CpMEX31_RS10115	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CpMEX31_RS10125	SM01110	CpMEX31_RS10125
CpMEX31_RS10195	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS10210	SM00644	CpMEX31_RS10210
CpMEX31_RS10210	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CpMEX31_RS10220	SM00563	Phosphate acyltransferases
CpMEX31_RS10230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpMEX31_RS10230	SM00866	CpMEX31_RS10230
CpMEX31_RS10245	SM00855	Phosphoglycerate mutase family
CpMEX31_RS10310	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CpMEX31_RS10390	SM00421	helix_turn_helix, Lux Regulon
CpMEX31_RS10390	SM00448	cheY-homologous receiver domain
CpMEX31_RS10395	SM00387	Histidine kinase-like ATPases
CpMEX31_RS10470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpMEX31_RS10505	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS10560	SM00347	helix_turn_helix multiple antibiotic resistance protein
CpMEX31_RS10580	SM00450	Rhodanese Homology Domain
CpMEX31_RS10595	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CpMEX31_RS10595	SM01232	CpMEX31_RS10595
CpMEX31_RS10620	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS10640	SM00421	helix_turn_helix, Lux Regulon
CpMEX31_RS10640	SM00448	cheY-homologous receiver domain
CpMEX31_RS10670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpMEX31_RS10670	SM00895	CpMEX31_RS10670
CpMEX31_RS10685	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS10690	SM00382	ATPases associated with a variety of cellular activities
CpMEX31_RS10695	SM01130	CpMEX31_RS10695
CpMEX31_RS10870	SM00646	CpMEX31_RS10870
CpMEX31_RS10880	SM00470	ParB-like nuclease domain
CpMEX31_RS10900	SM01234	CpMEX31_RS10900
