CpMEX9_RS00005	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CpMEX9_RS00010	SM00480	DNA polymerase III beta subunit
CpMEX9_RS00025	SM00387	Histidine kinase-like ATPases
CpMEX9_RS00025	SM00433	TopoisomeraseII
CpMEX9_RS00045	SM00434	DNA Topoisomerase IV
CpMEX9_RS00095	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS00140	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS00165	SM00220	Serine/Threonine protein kinases, catalytic domain
CpMEX9_RS00165	SM00740	CpMEX9_RS00165
CpMEX9_RS00170	SM00220	Serine/Threonine protein kinases, catalytic domain
CpMEX9_RS00185	SM00331	Sigma factor PP2C-like phosphatases
CpMEX9_RS00185	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CpMEX9_RS00190	SM00240	Forkhead associated domain
CpMEX9_RS00195	SM00240	Forkhead associated domain
CpMEX9_RS00225	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS00235	SM00924	MgtE intracellular N domain
CpMEX9_RS00240	SM00642	Alpha-amylase domain
CpMEX9_RS00295	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS00305	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpMEX9_RS00305	SM00876	Biotin and Thiamin Synthesis associated domain
CpMEX9_RS00330	SM00641	Glycosyl hydrolases family 25
CpMEX9_RS00380	SM00347	helix_turn_helix multiple antibiotic resistance protein
CpMEX9_RS00420	SM00487	DEAD-like helicases superfamily
CpMEX9_RS00420	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS00420	SM00847	Helicase associated domain (HA2)  Add an annotation
CpMEX9_RS00435	SM00822	CpMEX9_RS00435
CpMEX9_RS00465	SM00507	HNH nucleases
CpMEX9_RS00585	SM00014	Acid phosphatase homologues
CpMEX9_RS00590	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS00605	SM00829	Enoylreductase
CpMEX9_RS00640	SM01061	CAT RNA binding domain
CpMEX9_RS00675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpMEX9_RS00735	SM00829	Enoylreductase
CpMEX9_RS00765	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS00775	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CpMEX9_RS00775	SM00493	CpMEX9_RS00775
CpMEX9_RS00795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpMEX9_RS00795	SM00895	CpMEX9_RS00795
CpMEX9_RS00825	SM00917	LeuA allosteric (dimerisation) domain
CpMEX9_RS00845	SM01133	CpMEX9_RS00845
CpMEX9_RS00895	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CpMEX9_RS00905	SM01060	CpMEX9_RS00905
CpMEX9_RS00935	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS00955	SM00448	cheY-homologous receiver domain
CpMEX9_RS00955	SM00862	Transcriptional regulatory protein, C terminal
CpMEX9_RS00960	SM00387	Histidine kinase-like ATPases
CpMEX9_RS00960	SM00388	His Kinase A (phosphoacceptor) domain
CpMEX9_RS01010	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS01060	SM00849	Metallo-beta-lactamase superfamily
CpMEX9_RS01065	SM00100	Cyclic nucleotide-monophosphate binding domain
CpMEX9_RS01065	SM00419	helix_turn_helix, cAMP Regulatory protein
CpMEX9_RS01075	SM00478	endonuclease III
CpMEX9_RS01075	SM00525	CpMEX9_RS01075
CpMEX9_RS01150	SM00487	DEAD-like helicases superfamily
CpMEX9_RS01150	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS01155	SM00357	Cold shock protein domain
CpMEX9_RS01160	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CpMEX9_RS01160	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CpMEX9_RS01160	SM00493	CpMEX9_RS01160
CpMEX9_RS01170	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CpMEX9_RS01170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CpMEX9_RS01235	SM00530	Helix-turn-helix XRE-family like proteins 
CpMEX9_RS01320	SM00855	Phosphoglycerate mutase family
CpMEX9_RS01325	SM00387	Histidine kinase-like ATPases
CpMEX9_RS01325	SM00388	His Kinase A (phosphoacceptor) domain
CpMEX9_RS01330	SM00448	cheY-homologous receiver domain
CpMEX9_RS01330	SM00862	Transcriptional regulatory protein, C terminal
CpMEX9_RS01395	SM01004	Delta-aminolevulinic acid dehydratase
CpMEX9_RS01430	SM00855	Phosphoglycerate mutase family
CpMEX9_RS01455	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS01505	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CpMEX9_RS01570	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CpMEX9_RS01575	SM00649	Ribosomal protein L11/L12
CpMEX9_RS01625	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS01650	SM00663	RNA polymerase I subunit A N-terminus
CpMEX9_RS01660	SM00421	helix_turn_helix, Lux Regulon
CpMEX9_RS01660	SM00448	cheY-homologous receiver domain
CpMEX9_RS01715	SM00838	Elongation factor G C-terminus
CpMEX9_RS01715	SM00889	Elongation factor G, domain IV
CpMEX9_RS01760	SM01403	CpMEX9_RS01760
CpMEX9_RS01780	SM01382	CpMEX9_RS01780
CpMEX9_RS01780	SM01383	CpMEX9_RS01780
CpMEX9_RS01795	SM00322	K homology RNA-binding domain
CpMEX9_RS01820	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS01835	SM01374	CpMEX9_RS01835
CpMEX9_RS01840	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CpMEX9_RS01860	SM00870	CpMEX9_RS01860
CpMEX9_RS01865	SM00014	Acid phosphatase homologues
CpMEX9_RS01935	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS01970	SM00316	Ribosomal protein S1-like RNA-binding domain
CpMEX9_RS01985	SM00363	S4 RNA-binding domain
CpMEX9_RS01985	SM01390	CpMEX9_RS01985
CpMEX9_RS01990	SM00662	RNA polymerases D
CpMEX9_RS02025	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS02080	SM01005	Alanine racemase, C-terminal domain
CpMEX9_RS02115	SM00883	Chaperonin 10 Kd subunit
CpMEX9_RS02140	SM00116	Domain in cystathionine beta-synthase and other proteins.
CpMEX9_RS02140	SM01240	CpMEX9_RS02140
CpMEX9_RS02145	SM01240	CpMEX9_RS02145
CpMEX9_RS02175	SM00421	helix_turn_helix, Lux Regulon
CpMEX9_RS02175	SM00448	cheY-homologous receiver domain
CpMEX9_RS02195	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS02230	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS02245	SM00529	Helix-turn-helix diphteria tox regulatory element
CpMEX9_RS02245	SM00899	CpMEX9_RS02245
CpMEX9_RS02265	SM00507	HNH nucleases
CpMEX9_RS02295	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS02320	SM00422	helix_turn_helix, mercury resistance
CpMEX9_RS02375	SM00530	Helix-turn-helix XRE-family like proteins 
CpMEX9_RS02395	SM00878	Biotin carboxylase C-terminal domain
CpMEX9_RS02410	SM00878	Biotin carboxylase C-terminal domain
CpMEX9_RS02415	SM00450	Rhodanese Homology Domain
CpMEX9_RS02445	SM00354	helix_turn _helix lactose operon repressor
CpMEX9_RS02480	SM01001	AIR carboxylase
CpMEX9_RS02570	SM00996	S-adenosyl-L-homocysteine hydrolase
CpMEX9_RS02570	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CpMEX9_RS02580	SM00448	cheY-homologous receiver domain
CpMEX9_RS02580	SM00862	Transcriptional regulatory protein, C terminal
CpMEX9_RS02585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CpMEX9_RS02585	SM00387	Histidine kinase-like ATPases
CpMEX9_RS02585	SM00388	His Kinase A (phosphoacceptor) domain
CpMEX9_RS02590	SM00909	Sporulation and spore germination
CpMEX9_RS02605	SM00957	SecA DEAD-like domain
CpMEX9_RS02605	SM00958	SecA preprotein cross-linking domain
CpMEX9_RS02685	SM00487	DEAD-like helicases superfamily
CpMEX9_RS02685	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS02725	SM00341	Helicase and RNase D C-terminal
CpMEX9_RS02745	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CpMEX9_RS02790	SM00487	DEAD-like helicases superfamily
CpMEX9_RS02790	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS02820	SM00823	Phosphopantetheine attachment site
CpMEX9_RS02870	SM00937	CpMEX9_RS02870
CpMEX9_RS02885	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS02905	SM00947	Carbonic anhydrase
CpMEX9_RS02925	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS02990	SM00387	Histidine kinase-like ATPases
CpMEX9_RS02995	SM00421	helix_turn_helix, Lux Regulon
CpMEX9_RS02995	SM00448	cheY-homologous receiver domain
CpMEX9_RS03065	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CpMEX9_RS03125	SM00855	Phosphoglycerate mutase family
CpMEX9_RS03140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpMEX9_RS03140	SM00866	CpMEX9_RS03140
CpMEX9_RS03150	SM00563	Phosphate acyltransferases
CpMEX9_RS03160	SM00644	CpMEX9_RS03160
CpMEX9_RS03160	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CpMEX9_RS03175	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS03200	SM00014	Acid phosphatase homologues
CpMEX9_RS03215	SM00014	Acid phosphatase homologues
CpMEX9_RS03250	SM01110	CpMEX9_RS03250
CpMEX9_RS03260	SM00823	Phosphopantetheine attachment site
CpMEX9_RS03260	SM00824	Thioesterase
CpMEX9_RS03260	SM00825	Beta-ketoacyl synthase
CpMEX9_RS03260	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CpMEX9_RS03375	SM00984	UDP binding domain
CpMEX9_RS03430	SM00988	UreE urease accessory protein, N-terminal domain
CpMEX9_RS03460	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS03465	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CpMEX9_RS03500	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS03505	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS03540	SM00271	DnaJ molecular chaperone homology domain
CpMEX9_RS03545	SM00422	helix_turn_helix, mercury resistance
CpMEX9_RS03565	SM00829	Enoylreductase
CpMEX9_RS03590	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS03645	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS03650	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS03650	SM01086	C-terminal, D2-small domain, of ClpB protein
CpMEX9_RS03690	SM00450	Rhodanese Homology Domain
CpMEX9_RS03740	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS03770	SM00788	Adenylosuccinate synthetase
CpMEX9_RS03785	SM00028	Tetratricopeptide repeats
CpMEX9_RS03860	SM00220	Serine/Threonine protein kinases, catalytic domain
CpMEX9_RS03865	SM00062	Bacterial periplasmic substrate-binding proteins
CpMEX9_RS03880	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS03890	SM00155	Phospholipase D. Active site motifs.
CpMEX9_RS04000	SM00823	Phosphopantetheine attachment site
CpMEX9_RS04005	SM00347	helix_turn_helix multiple antibiotic resistance protein
CpMEX9_RS04020	SM00450	Rhodanese Homology Domain
CpMEX9_RS04045	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS04060	SM00905	Dihydroneopterin aldolase
CpMEX9_RS04115	SM00244	prohibitin homologues
CpMEX9_RS04150	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS04150	SM01086	C-terminal, D2-small domain, of ClpB protein
CpMEX9_RS04160	SM00478	endonuclease III
CpMEX9_RS04160	SM00525	CpMEX9_RS04160
CpMEX9_RS04165	SM00947	Carbonic anhydrase
CpMEX9_RS04175	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS04195	SM01058	CarD-like/TRCF domain
CpMEX9_RS04210	SM00840	CpMEX9_RS04210
CpMEX9_RS04215	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CpMEX9_RS04225	SM00354	helix_turn _helix lactose operon repressor
CpMEX9_RS04295	SM00448	cheY-homologous receiver domain
CpMEX9_RS04295	SM00862	Transcriptional regulatory protein, C terminal
CpMEX9_RS04300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CpMEX9_RS04300	SM00387	Histidine kinase-like ATPases
CpMEX9_RS04300	SM00388	His Kinase A (phosphoacceptor) domain
CpMEX9_RS04315	SM01209	CpMEX9_RS04315
CpMEX9_RS04315	SM01210	CpMEX9_RS04315
CpMEX9_RS04330	SM00998	Adenylosuccinate lyase C-terminus
CpMEX9_RS04360	SM01211	CpMEX9_RS04360
CpMEX9_RS04420	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CpMEX9_RS04445	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS04470	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS04475	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS04535	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CpMEX9_RS04535	SM00421	helix_turn_helix, Lux Regulon
CpMEX9_RS04580	SM00363	S4 RNA-binding domain
CpMEX9_RS04650	SM00363	S4 RNA-binding domain
CpMEX9_RS04700	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS04735	SM00957	SecA DEAD-like domain
CpMEX9_RS04735	SM00958	SecA preprotein cross-linking domain
CpMEX9_RS04740	SM00240	Forkhead associated domain
CpMEX9_RS04745	SM00422	helix_turn_helix, mercury resistance
CpMEX9_RS04755	SM00422	helix_turn_helix, mercury resistance
CpMEX9_RS04760	SM00327	von Willebrand factor (vWF) type A domain
CpMEX9_RS04775	SM01091	Transporter associated domain
CpMEX9_RS04780	SM00487	DEAD-like helicases superfamily
CpMEX9_RS04780	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS04785	SM01350	CpMEX9_RS04785
CpMEX9_RS04825	SM00867	YceI-like domain 
CpMEX9_RS04900	SM00487	DEAD-like helicases superfamily
CpMEX9_RS04900	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS04900	SM01142	CpMEX9_RS04900
CpMEX9_RS04940	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS04995	SM01018	B12 binding domain
CpMEX9_RS05050	SM01120	CpMEX9_RS05050
CpMEX9_RS05105	SM00244	prohibitin homologues
CpMEX9_RS05180	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS05225	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS05245	SM00861	Transketolase, pyrimidine binding domain
CpMEX9_RS05290	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CpMEX9_RS05310	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CpMEX9_RS05310	SM00465	GIY-YIG type nucleases (URI domain)
CpMEX9_RS05375	SM01409	CpMEX9_RS05375
CpMEX9_RS05380	SM00072	Guanylate kinase homologues.
CpMEX9_RS05390	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CpMEX9_RS05395	SM00851	MGS-like domain
CpMEX9_RS05395	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CpMEX9_RS05400	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CpMEX9_RS05440	SM00841	Elongation factor P, C-terminal
CpMEX9_RS05440	SM01185	CpMEX9_RS05440
CpMEX9_RS05485	SM00732	Likely ribonuclease with RNase H fold.
CpMEX9_RS05490	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CpMEX9_RS05495	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS05515	SM00487	DEAD-like helicases superfamily
CpMEX9_RS05515	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS05565	SM00849	Metallo-beta-lactamase superfamily
CpMEX9_RS05585	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CpMEX9_RS05585	SM00954	Region found in RelA / SpoT proteins
CpMEX9_RS05610	SM01323	CpMEX9_RS05610
CpMEX9_RS05615	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS05680	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CpMEX9_RS05750	SM00474	3'-5' exonuclease
CpMEX9_RS05755	SM00861	Transketolase, pyrimidine binding domain
CpMEX9_RS05810	SM00487	DEAD-like helicases superfamily
CpMEX9_RS05840	SM00529	Helix-turn-helix diphteria tox regulatory element
CpMEX9_RS05860	SM00487	DEAD-like helicases superfamily
CpMEX9_RS05860	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS05885	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS05885	SM00487	DEAD-like helicases superfamily
CpMEX9_RS05885	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS05885	SM00847	Helicase associated domain (HA2)  Add an annotation
CpMEX9_RS05905	SM00420	helix_turn_helix, Deoxyribose operon repressor
CpMEX9_RS05905	SM01134	CpMEX9_RS05905
CpMEX9_RS05915	SM00420	helix_turn_helix, Deoxyribose operon repressor
CpMEX9_RS05915	SM01134	CpMEX9_RS05915
CpMEX9_RS05995	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpMEX9_RS06005	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS06020	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS06035	SM00530	Helix-turn-helix XRE-family like proteins 
CpMEX9_RS06060	SM00843	CpMEX9_RS06060
CpMEX9_RS06070	SM00849	Metallo-beta-lactamase superfamily
CpMEX9_RS06075	SM01130	CpMEX9_RS06075
CpMEX9_RS06090	SM00316	Ribosomal protein S1-like RNA-binding domain
CpMEX9_RS06090	SM00322	K homology RNA-binding domain
CpMEX9_RS06095	SM01387	CpMEX9_RS06095
CpMEX9_RS06105	SM00904	Riboflavin kinase
CpMEX9_RS06140	SM00173	Ras subfamily of RAS small GTPases
CpMEX9_RS06150	SM00322	K homology RNA-binding domain
CpMEX9_RS06185	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CpMEX9_RS06205	SM00327	von Willebrand factor (vWF) type A domain
CpMEX9_RS06210	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS06255	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CpMEX9_RS06320	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS06345	SM00316	Ribosomal protein S1-like RNA-binding domain
CpMEX9_RS06345	SM00732	Likely ribonuclease with RNase H fold.
CpMEX9_RS06380	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS06380	SM00962	SRP54-type protein, GTPase domain
CpMEX9_RS06380	SM00963	SRP54-type protein, helical bundle domain
CpMEX9_RS06385	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CpMEX9_RS06390	SM00938	Nitrogen regulatory protein P-II
CpMEX9_RS06395	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS06395	SM00962	SRP54-type protein, GTPase domain
CpMEX9_RS06395	SM00963	SRP54-type protein, helical bundle domain
CpMEX9_RS06420	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CpMEX9_RS06420	SM01232	CpMEX9_RS06420
CpMEX9_RS06425	SM00358	Double-stranded RNA binding motif
CpMEX9_RS06425	SM00535	Ribonuclease III family
CpMEX9_RS06445	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CpMEX9_RS06445	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CpMEX9_RS06450	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CpMEX9_RS06575	SM00642	Alpha-amylase domain
CpMEX9_RS06580	SM00479	CpMEX9_RS06580
CpMEX9_RS06590	SM00954	Region found in RelA / SpoT proteins
CpMEX9_RS06595	SM00363	S4 RNA-binding domain
CpMEX9_RS06615	SM00481	DNA polymerase alpha chain like domain
CpMEX9_RS06650	SM00870	CpMEX9_RS06650
CpMEX9_RS06690	SM00864	Tubulin/FtsZ family, GTPase domain
CpMEX9_RS06690	SM00865	Tubulin/FtsZ family, C-terminal domain
CpMEX9_RS06810	SM00563	Phosphate acyltransferases
CpMEX9_RS06940	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpMEX9_RS06955	SM01230	CpMEX9_RS06955
CpMEX9_RS07070	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS07095	SM00116	Domain in cystathionine beta-synthase and other proteins.
CpMEX9_RS07095	SM01240	CpMEX9_RS07095
CpMEX9_RS07140	SM01230	CpMEX9_RS07140
CpMEX9_RS07150	SM00880	CpMEX9_RS07150
CpMEX9_RS07150	SM01118	CpMEX9_RS07150
CpMEX9_RS07165	SM00955	CpMEX9_RS07165
CpMEX9_RS07175	SM00855	Phosphoglycerate mutase family
CpMEX9_RS07200	SM00226	Low molecular weight phosphatase family
CpMEX9_RS07280	SM00400	zinc finger
CpMEX9_RS07280	SM00493	CpMEX9_RS07280
CpMEX9_RS07280	SM00766	DNA primase DnaG DnaB-binding
CpMEX9_RS07300	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CpMEX9_RS07330	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CpMEX9_RS07365	SM01091	Transporter associated domain
CpMEX9_RS07375	SM00322	K homology RNA-binding domain
CpMEX9_RS07385	SM00271	DnaJ molecular chaperone homology domain
CpMEX9_RS07395	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpMEX9_RS07455	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS07470	SM00507	HNH nucleases
CpMEX9_RS07505	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS07545	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS07550	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS07560	SM00838	Elongation factor G C-terminus
CpMEX9_RS07580	SM00248	ankyrin repeats
CpMEX9_RS07605	SM00855	Phosphoglycerate mutase family
CpMEX9_RS07640	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CpMEX9_RS07660	SM00316	Ribosomal protein S1-like RNA-binding domain
CpMEX9_RS07670	SM00562	CpMEX9_RS07670
CpMEX9_RS07705	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS07705	SM00994	ClpX C4-type zinc finger
CpMEX9_RS07705	SM01086	C-terminal, D2-small domain, of ClpB protein
CpMEX9_RS07800	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS07850	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS07880	SM00829	Enoylreductase
CpMEX9_RS07885	SM00822	CpMEX9_RS07885
CpMEX9_RS07890	SM00479	CpMEX9_RS07890
CpMEX9_RS07900	SM01130	CpMEX9_RS07900
CpMEX9_RS07915	SM00829	Enoylreductase
CpMEX9_RS07950	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CpMEX9_RS07965	SM00421	helix_turn_helix, Lux Regulon
CpMEX9_RS07965	SM00448	cheY-homologous receiver domain
CpMEX9_RS08045	SM00487	DEAD-like helicases superfamily
CpMEX9_RS08045	SM00491	CpMEX9_RS08045
CpMEX9_RS08135	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CpMEX9_RS08205	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS08230	SM00363	S4 RNA-binding domain
CpMEX9_RS08275	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CpMEX9_RS08280	SM00873	B3/4 domain
CpMEX9_RS08280	SM00874	tRNA synthetase B5 domain
CpMEX9_RS08280	SM00896	Ferredoxin-fold anticodon binding domain
CpMEX9_RS08290	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CpMEX9_RS08320	SM00849	Metallo-beta-lactamase superfamily
CpMEX9_RS08330	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS08340	SM00487	DEAD-like helicases superfamily
CpMEX9_RS08340	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS08360	SM00316	Ribosomal protein S1-like RNA-binding domain
CpMEX9_RS08370	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CpMEX9_RS08370	SM00474	3'-5' exonuclease
CpMEX9_RS08370	SM00475	5'-3' exonuclease
CpMEX9_RS08370	SM00482	DNA polymerase A domain
CpMEX9_RS08385	SM00062	Bacterial periplasmic substrate-binding proteins
CpMEX9_RS08395	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS08425	SM00487	DEAD-like helicases superfamily
CpMEX9_RS08425	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS08430	SM01120	CpMEX9_RS08430
CpMEX9_RS08430	SM01121	CpMEX9_RS08430
CpMEX9_RS08435	SM00986	Uracil DNA glycosylase superfamily
CpMEX9_RS08435	SM00987	UreE urease accessory protein, C-terminal domain 
CpMEX9_RS08460	SM00855	Phosphoglycerate mutase family
CpMEX9_RS08475	SM00346	helix_turn_helix isocitrate lyase regulation
CpMEX9_RS08480	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CpMEX9_RS08485	SM00729	Elongator protein 3, MiaB family, Radical SAM
CpMEX9_RS08485	SM00876	Biotin and Thiamin Synthesis associated domain
CpMEX9_RS08495	SM01110	CpMEX9_RS08495
CpMEX9_RS08535	SM00479	CpMEX9_RS08535
CpMEX9_RS08540	SM00100	Cyclic nucleotide-monophosphate binding domain
CpMEX9_RS08540	SM00116	Domain in cystathionine beta-synthase and other proteins.
CpMEX9_RS08545	SM01329	CpMEX9_RS08545
CpMEX9_RS08625	SM00845	GatB domain
CpMEX9_RS08640	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS08680	SM00292	breast cancer carboxy-terminal domain
CpMEX9_RS08680	SM00532	Ligase N family
CpMEX9_RS08685	SM00479	CpMEX9_RS08685
CpMEX9_RS08710	SM00893	Electron transfer flavoprotein domain
CpMEX9_RS08715	SM00893	Electron transfer flavoprotein domain
CpMEX9_RS08730	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS08735	SM00642	Alpha-amylase domain
CpMEX9_RS08740	SM00642	Alpha-amylase domain
CpMEX9_RS08775	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS08830	SM00937	CpMEX9_RS08830
CpMEX9_RS08835	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS08835	SM00959	Rho termination factor, N-terminal domain
CpMEX9_RS08865	SM00836	DALR anticodon binding domain
CpMEX9_RS08865	SM01016	Arginyl tRNA synthetase N terminal dom
CpMEX9_RS08915	SM00347	helix_turn_helix multiple antibiotic resistance protein
CpMEX9_RS08920	SM00867	YceI-like domain 
CpMEX9_RS08940	SM00487	DEAD-like helicases superfamily
CpMEX9_RS08940	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS08970	SM00487	DEAD-like helicases superfamily
CpMEX9_RS08970	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS09025	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS09030	SM00861	Transketolase, pyrimidine binding domain
CpMEX9_RS09040	SM00924	MgtE intracellular N domain
CpMEX9_RS09090	SM00640	Glycosyl hydrolases family 32
CpMEX9_RS09145	SM00507	HNH nucleases
CpMEX9_RS09200	SM00020	Trypsin-like serine protease
CpMEX9_RS09205	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS09240	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS09260	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS09265	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS09270	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS09425	SM00342	helix_turn_helix, arabinose operon control protein
CpMEX9_RS09450	SM01192	CpMEX9_RS09450
CpMEX9_RS09450	SM01193	CpMEX9_RS09450
CpMEX9_RS09470	SM00487	DEAD-like helicases superfamily
CpMEX9_RS09470	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS09470	SM00982	CpMEX9_RS09470
CpMEX9_RS09470	SM01058	CarD-like/TRCF domain
CpMEX9_RS09500	SM01400	CpMEX9_RS09500
CpMEX9_RS09505	SM00642	Alpha-amylase domain
CpMEX9_RS09535	SM00822	CpMEX9_RS09535
CpMEX9_RS09555	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CpMEX9_RS09595	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS09605	SM00650	Ribosomal RNA adenine dimethylases
CpMEX9_RS09610	SM01208	CpMEX9_RS09610
CpMEX9_RS09665	SM00852	Probable molybdopterin binding domain
CpMEX9_RS09690	SM00852	Probable molybdopterin binding domain
CpMEX9_RS09695	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CpMEX9_RS09700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CpMEX9_RS09700	SM00387	Histidine kinase-like ATPases
CpMEX9_RS09700	SM00388	His Kinase A (phosphoacceptor) domain
CpMEX9_RS09705	SM00448	cheY-homologous receiver domain
CpMEX9_RS09705	SM00862	Transcriptional regulatory protein, C terminal
CpMEX9_RS09765	SM00062	Bacterial periplasmic substrate-binding proteins
CpMEX9_RS09770	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS09775	SM00798	AICARFT/IMPCHase bienzyme
CpMEX9_RS09775	SM00851	MGS-like domain
CpMEX9_RS09800	SM00830	Chorismate mutase type II
CpMEX9_RS09820	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CpMEX9_RS09820	SM01232	CpMEX9_RS09820
CpMEX9_RS09830	SM00487	DEAD-like helicases superfamily
CpMEX9_RS09830	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS09870	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS10015	SM00357	Cold shock protein domain
CpMEX9_RS10035	SM00487	DEAD-like helicases superfamily
CpMEX9_RS10035	SM00490	helicase superfamily c-terminal domain
CpMEX9_RS10080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpMEX9_RS10115	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS10160	SM00347	helix_turn_helix multiple antibiotic resistance protein
CpMEX9_RS10180	SM00450	Rhodanese Homology Domain
CpMEX9_RS10195	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CpMEX9_RS10195	SM01232	CpMEX9_RS10195
CpMEX9_RS10220	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS10245	SM00421	helix_turn_helix, Lux Regulon
CpMEX9_RS10245	SM00448	cheY-homologous receiver domain
CpMEX9_RS10275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CpMEX9_RS10275	SM00895	CpMEX9_RS10275
CpMEX9_RS10290	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS10295	SM00382	ATPases associated with a variety of cellular activities
CpMEX9_RS10300	SM01130	CpMEX9_RS10300
CpMEX9_RS10475	SM00646	CpMEX9_RS10475
CpMEX9_RS10485	SM00470	ParB-like nuclease domain
CpMEX9_RS10505	SM01234	CpMEX9_RS10505
