locus-tag class description CpN1_RS00005 PF00308 Bacterial dnaA protein CpN1_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CpN1_RS00010 PF02767 DNA polymerase III beta subunit, central domain CpN1_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CpN1_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CpN1_RS00015 PF02463 RecF/RecN/SMC N terminal domain CpN1_RS00020 PF05258 Dna[CI] antecedent, DciA CpN1_RS00025 PF00204 DNA gyrase B CpN1_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus CpN1_RS00025 PF01751 Toprim domain CpN1_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpN1_RS00045 PF00521 DNA gyrase/topoisomerase IV, subunit A CpN1_RS00045 PF03989 DNA gyrase C-terminal domain, beta-propeller CpN1_RS00085 PF02653 Branched-chain amino acid transport system / permease component CpN1_RS00090 PF00005 ABC transporter CpN1_RS00100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CpN1_RS00135 PF00005 ABC transporter CpN1_RS00140 PF01032 FecCD transport family CpN1_RS00145 PF01032 FecCD transport family CpN1_RS00150 PF01497 Periplasmic binding protein CpN1_RS00155 PF06781 Cell division protein CrgA CpN1_RS00160 PF00069 Protein kinase domain CpN1_RS00160 PF03793 PASTA domain CpN1_RS00165 PF00069 Protein kinase domain CpN1_RS00170 PF00905 Penicillin binding protein transpeptidase domain CpN1_RS00175 PF01098 Cell cycle protein CpN1_RS00190 PF12401 Protein of unknown function (DUF2662) CpN1_RS00190 PF00498 FHA domain CpN1_RS00190 PF00498 FHA domain CpN1_RS00190 PF12401 Protein of unknown function (DUF2662) CpN1_RS00220 PF00005 ABC transporter CpN1_RS00225 PF01032 FecCD transport family CpN1_RS00230 PF00571 CBS domain CpN1_RS00230 PF01769 Divalent cation transporter CpN1_RS00230 PF03448 MgtE intracellular N domain CpN1_RS00235 PF16657 Maltogenic Amylase, C-terminal domain CpN1_RS00235 PF00128 Alpha amylase, catalytic domain CpN1_RS00260 PF04545 Sigma-70, region 4 CpN1_RS00260 PF04542 Sigma-70 region 2 CpN1_RS00270 PF00578 AhpC/TSA family CpN1_RS00270 PF02683 Cytochrome C biogenesis protein transmembrane region CpN1_RS00270 PF17991 Thioredoxin like C-terminal domain CpN1_RS00280 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS00285 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS00290 PF00005 ABC transporter CpN1_RS00290 PF00571 CBS domain CpN1_RS00295 PF07687 Peptidase dimerisation domain CpN1_RS00295 PF01546 Peptidase family M20/M25/M40 CpN1_RS00300 PF04055 Radical SAM superfamily CpN1_RS00300 PF06968 Biotin and Thiamin Synthesis associated domain CpN1_RS00315 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CpN1_RS00315 PF01048 Phosphorylase superfamily CpN1_RS00325 PF01471 Putative peptidoglycan binding domain CpN1_RS00325 PF01183 Glycosyl hydrolases family 25 CpN1_RS00350 PF00132 Bacterial transferase hexapeptide (six repeats) CpN1_RS00365 PF03641 Possible lysine decarboxylase CpN1_RS00375 PF01047 MarR family CpN1_RS00390 PF05145 Transition state regulatory protein AbrB CpN1_RS00400 PF01925 Sulfite exporter TauE/SafE CpN1_RS00405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CpN1_RS00415 PF08482 ATP-dependent helicase C-terminal CpN1_RS00415 PF00271 Helicase conserved C-terminal domain CpN1_RS00415 PF04408 Helicase associated domain (HA2) CpN1_RS00415 PF00270 DEAD/DEAH box helicase CpN1_RS00420 PF13532 2OG-Fe(II) oxygenase superfamily CpN1_RS00425 PF03352 Methyladenine glycosylase CpN1_RS00425 PF13302 Acetyltransferase (GNAT) domain CpN1_RS00425 PF13673 Acetyltransferase (GNAT) domain CpN1_RS00425 PF00117 Glutamine amidotransferase class-I CpN1_RS00425 PF00958 GMP synthase C terminal domain CpN1_RS00430 PF00106 short chain dehydrogenase CpN1_RS00435 PF01906 Putative heavy-metal-binding CpN1_RS00465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CpN1_RS00465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CpN1_RS00470 PF00230 Major intrinsic protein CpN1_RS00480 PF05649 Peptidase family M13 CpN1_RS00480 PF01431 Peptidase family M13 CpN1_RS00500 PF17689 Arabinosyltransferase concanavalin like domain CpN1_RS00500 PF04602 Mycobacterial cell wall arabinan synthesis protein CpN1_RS00500 PF14896 EmbC C-terminal domain CpN1_RS00505 PF12250 Arabinofuranosyltransferase N terminal CpN1_RS00505 PF12249 Arabinofuranosyltransferase A C terminal CpN1_RS00510 PF00106 short chain dehydrogenase CpN1_RS00515 PF01565 FAD binding domain CpN1_RS00515 PF04030 D-arabinono-1,4-lactone oxidase CpN1_RS00540 PF04138 GtrA-like protein CpN1_RS00560 PF00005 ABC transporter CpN1_RS00570 PF00950 ABC 3 transport family CpN1_RS00575 PF01297 Zinc-uptake complex component A periplasmic CpN1_RS00585 PF00005 ABC transporter CpN1_RS00590 PF01061 ABC-2 type transporter CpN1_RS00595 PF00266 Aminotransferase class-V CpN1_RS00600 PF08240 Alcohol dehydrogenase GroES-like domain CpN1_RS00600 PF00107 Zinc-binding dehydrogenase CpN1_RS00610 PF00155 Aminotransferase class I and II CpN1_RS00625 PF00939 Sodium:sulfate symporter transmembrane region CpN1_RS00635 PF03123 CAT RNA binding domain CpN1_RS00635 PF00874 PRD domain CpN1_RS00640 PF02378 Phosphotransferase system, EIIC CpN1_RS00640 PF00367 phosphotransferase system, EIIB CpN1_RS00645 PF00367 phosphotransferase system, EIIB CpN1_RS00645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CpN1_RS00645 PF02378 Phosphotransferase system, EIIC CpN1_RS00655 PF00115 Cytochrome C and Quinol oxidase polypeptide I CpN1_RS00670 PF00392 Bacterial regulatory proteins, gntR family CpN1_RS00675 PF01680 SOR/SNZ family CpN1_RS00680 PF01174 SNO glutamine amidotransferase family CpN1_RS00685 PF02153 Prephenate dehydrogenase CpN1_RS00695 PF14437 MafB19-like deaminase CpN1_RS00705 PF03176 MMPL family CpN1_RS00710 PF01702 Queuine tRNA-ribosyltransferase CpN1_RS00715 PF00749 tRNA synthetases class I (E and Q), catalytic domain CpN1_RS00720 PF02447 GntP family permease CpN1_RS00725 PF01202 Shikimate kinase CpN1_RS00730 PF08240 Alcohol dehydrogenase GroES-like domain CpN1_RS00730 PF00107 Zinc-binding dehydrogenase CpN1_RS00745 PF12897 Alanine-glyoxylate amino-transferase CpN1_RS00755 PF12169 DNA polymerase III subunits gamma and tau domain III CpN1_RS00760 PF02575 YbaB/EbfC DNA-binding family CpN1_RS00765 PF02132 RecR protein CpN1_RS00765 PF13662 Toprim domain CpN1_RS00770 PF02447 GntP family permease CpN1_RS00775 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CpN1_RS00775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CpN1_RS00785 PF00392 Bacterial regulatory proteins, gntR family CpN1_RS00785 PF07729 FCD domain CpN1_RS00790 PF01557 Fumarylacetoacetate (FAA) hydrolase family CpN1_RS00795 PF07685 CobB/CobQ-like glutamine amidotransferase domain CpN1_RS00800 PF08245 Mur ligase middle domain CpN1_RS00800 PF02875 Mur ligase family, glutamate ligase domain CpN1_RS00810 PF00881 Nitroreductase family CpN1_RS00815 PF00682 HMGL-like CpN1_RS00815 PF08502 LeuA allosteric (dimerisation) domain CpN1_RS00820 PF04198 Putative sugar-binding domain CpN1_RS00825 PF01048 Phosphorylase superfamily CpN1_RS00830 PF07690 Major Facilitator Superfamily CpN1_RS00835 PF01791 DeoC/LacD family aldolase CpN1_RS00840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CpN1_RS00840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CpN1_RS00840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CpN1_RS00840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CpN1_RS00850 PF17802 Prealbumin-like fold domain CpN1_RS00850 PF08341 Thioester domain CpN1_RS00855 PF17961 Bacterial Ig domain CpN1_RS00855 PF17210 SdrD B-like domain CpN1_RS00855 PF00746 LPXTG cell wall anchor motif CpN1_RS00855 PF04650 YSIRK type signal peptide CpN1_RS00870 PF00696 Amino acid kinase family CpN1_RS00870 PF13840 ACT domain CpN1_RS00870 PF01842 ACT domain CpN1_RS00875 PF17210 SdrD B-like domain CpN1_RS00875 PF00746 LPXTG cell wall anchor motif CpN1_RS00875 PF17961 Bacterial Ig domain CpN1_RS00875 PF04650 YSIRK type signal peptide CpN1_RS00875 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CpN1_RS00880 PF01118 Semialdehyde dehydrogenase, NAD binding domain CpN1_RS00880 PF02774 Semialdehyde dehydrogenase, dimerisation domain CpN1_RS00885 PF08281 Sigma-70, region 4 CpN1_RS00885 PF04542 Sigma-70 region 2 CpN1_RS00890 PF06628 Catalase-related immune-responsive CpN1_RS00890 PF00199 Catalase CpN1_RS00920 PF00005 ABC transporter CpN1_RS00920 PF17845 FbpC C-terminal regulatory nucleotide binding domain CpN1_RS00940 PF00072 Response regulator receiver domain CpN1_RS00940 PF00486 Transcriptional regulatory protein, C terminal CpN1_RS00945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpN1_RS00945 PF00512 His Kinase A (phospho-acceptor) domain CpN1_RS00945 PF00989 PAS fold CpN1_RS00965 PF00361 Proton-conducting membrane transporter CpN1_RS00970 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CpN1_RS00975 PF13244 Domain of unknown function (DUF4040) CpN1_RS00975 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CpN1_RS00975 PF00361 Proton-conducting membrane transporter CpN1_RS00975 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CpN1_RS00985 PF13810 Domain of unknown function (DUF4185) CpN1_RS00995 PF00005 ABC transporter CpN1_RS00995 PF13732 Domain of unknown function (DUF4162) CpN1_RS01000 PF00872 Transposase, Mutator family CpN1_RS01005 PF00872 Transposase, Mutator family CpN1_RS01030 PF00905 Penicillin binding protein transpeptidase domain CpN1_RS01030 PF00912 Transglycosylase CpN1_RS01035 PF02467 Transcription factor WhiB CpN1_RS01050 PF00027 Cyclic nucleotide-binding domain CpN1_RS01050 PF13545 Crp-like helix-turn-helix domain CpN1_RS01060 PF00633 Helix-hairpin-helix motif CpN1_RS01060 PF10576 Iron-sulfur binding domain of endonuclease III CpN1_RS01060 PF00730 HhH-GPD superfamily base excision DNA repair protein CpN1_RS01070 PF00293 NUDIX domain CpN1_RS01075 PF02674 Colicin V production protein CpN1_RS01110 PF00437 Type II/IV secretion system protein CpN1_RS01140 PF09369 Domain of unknown function (DUF1998) CpN1_RS01140 PF00271 Helicase conserved C-terminal domain CpN1_RS01140 PF00270 DEAD/DEAH box helicase CpN1_RS01145 PF00313 'Cold-shock' DNA-binding domain CpN1_RS01150 PF13368 Topoisomerase C-terminal repeat CpN1_RS01150 PF01751 Toprim domain CpN1_RS01150 PF01131 DNA topoisomerase CpN1_RS01155 PF03169 OPT oligopeptide transporter protein CpN1_RS01160 PF00672 HAMP domain CpN1_RS01160 PF00211 Adenylate and Guanylate cyclase catalytic domain CpN1_RS01165 PF09115 DNA polymerase III, delta subunit, C terminal CpN1_RS01180 PF00501 AMP-binding enzyme CpN1_RS01180 PF13193 AMP-binding enzyme C-terminal domain CpN1_RS01190 PF00483 Nucleotidyl transferase CpN1_RS01195 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CpN1_RS01200 PF16363 GDP-mannose 4,6 dehydratase CpN1_RS01210 PF00326 Prolyl oligopeptidase family CpN1_RS01210 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CpN1_RS01220 PF07992 Pyridine nucleotide-disulphide oxidoreductase CpN1_RS01220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CpN1_RS01225 PF01381 Helix-turn-helix CpN1_RS01225 PF06114 IrrE N-terminal-like domain CpN1_RS01225 PF09856 Predicted transcriptional regulator (DUF2083) CpN1_RS01235 PF00890 FAD binding domain CpN1_RS01235 PF02910 Fumarate reductase flavoprotein C-term CpN1_RS01240 PF13183 4Fe-4S dicluster domain CpN1_RS01240 PF13085 2Fe-2S iron-sulfur cluster binding domain CpN1_RS01250 PF04286 Protein of unknown function (DUF445) CpN1_RS01260 PF01791 DeoC/LacD family aldolase CpN1_RS01270 PF04055 Radical SAM superfamily CpN1_RS01275 PF01228 Glycine radical CpN1_RS01275 PF02901 Pyruvate formate lyase-like CpN1_RS01280 PF01228 Glycine radical CpN1_RS01280 PF02901 Pyruvate formate lyase-like CpN1_RS01295 PF01565 FAD binding domain CpN1_RS01295 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CpN1_RS01300 PF13193 AMP-binding enzyme C-terminal domain CpN1_RS01300 PF00501 AMP-binding enzyme CpN1_RS01305 PF00534 Glycosyl transferases group 1 CpN1_RS01305 PF13439 Glycosyltransferase Family 4 CpN1_RS01310 PF00300 Histidine phosphatase superfamily (branch 1) CpN1_RS01315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpN1_RS01315 PF00512 His Kinase A (phospho-acceptor) domain CpN1_RS01320 PF00486 Transcriptional regulatory protein, C terminal CpN1_RS01320 PF00072 Response regulator receiver domain CpN1_RS01330 PF02541 Ppx/GppA phosphatase family CpN1_RS01340 PF03807 NADP oxidoreductase coenzyme F420-dependent CpN1_RS01340 PF14748 Pyrroline-5-carboxylate reductase dimerisation CpN1_RS01345 PF12728 Helix-turn-helix domain CpN1_RS01350 PF13462 Thioredoxin CpN1_RS01350 PF06965 Na+/H+ antiporter 1 CpN1_RS01365 PF05768 Glutaredoxin-like domain (DUF836) CpN1_RS01370 PF01488 Shikimate / quinate 5-dehydrogenase CpN1_RS01370 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CpN1_RS01370 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CpN1_RS01375 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CpN1_RS01375 PF03900 Porphobilinogen deaminase, C-terminal domain CpN1_RS01380 PF10414 Sirohaem synthase dimerisation region CpN1_RS01380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpN1_RS01380 PF14824 Sirohaem biosynthesis protein central CpN1_RS01385 PF00490 Delta-aminolevulinic acid dehydratase CpN1_RS01395 PF00403 Heavy-metal-associated domain CpN1_RS01400 PF01208 Uroporphyrinogen decarboxylase (URO-D) CpN1_RS01405 PF01593 Flavin containing amine oxidoreductase CpN1_RS01415 PF00202 Aminotransferase class-III CpN1_RS01420 PF00300 Histidine phosphatase superfamily (branch 1) CpN1_RS01430 PF02683 Cytochrome C biogenesis protein transmembrane region CpN1_RS01435 PF05140 ResB-like family CpN1_RS01440 PF01795 MraW methylase family CpN1_RS01445 PF00005 ABC transporter CpN1_RS01455 PF01032 FecCD transport family CpN1_RS01460 PF01578 Cytochrome C assembly protein CpN1_RS01475 PF01040 UbiA prenyltransferase family CpN1_RS01480 PF13193 AMP-binding enzyme C-terminal domain CpN1_RS01480 PF00501 AMP-binding enzyme CpN1_RS01485 PF00378 Enoyl-CoA hydratase/isomerase CpN1_RS01490 PF03606 C4-dicarboxylate anaerobic carrier CpN1_RS01495 PF18374 Enolase N-terminal domain-like CpN1_RS01495 PF13378 Enolase C-terminal domain-like CpN1_RS01500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CpN1_RS01515 PF01209 ubiE/COQ5 methyltransferase family CpN1_RS01520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CpN1_RS01520 PF00056 lactate/malate dehydrogenase, NAD binding domain CpN1_RS01525 PF01494 FAD binding domain CpN1_RS01530 PF00348 Polyprenyl synthetase CpN1_RS01555 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CpN1_RS01560 PF02357 Transcription termination factor nusG CpN1_RS01565 PF00298 Ribosomal protein L11, RNA binding domain CpN1_RS01565 PF03946 Ribosomal protein L11, N-terminal domain CpN1_RS01570 PF00687 Ribosomal protein L1p/L10e family CpN1_RS01585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CpN1_RS01590 PF00466 Ribosomal protein L10 CpN1_RS01595 PF00542 Ribosomal protein L7/L12 C-terminal domain CpN1_RS01595 PF16320 Ribosomal protein L7/L12 dimerisation domain CpN1_RS01605 PF01297 Zinc-uptake complex component A periplasmic CpN1_RS01615 PF00005 ABC transporter CpN1_RS01620 PF00950 ABC 3 transport family CpN1_RS01635 PF04560 RNA polymerase Rpb2, domain 7 CpN1_RS01635 PF04563 RNA polymerase beta subunit CpN1_RS01635 PF04561 RNA polymerase Rpb2, domain 2 CpN1_RS01635 PF04565 RNA polymerase Rpb2, domain 3 CpN1_RS01635 PF10385 RNA polymerase beta subunit external 1 domain CpN1_RS01635 PF00562 RNA polymerase Rpb2, domain 6 CpN1_RS01640 PF04998 RNA polymerase Rpb1, domain 5 CpN1_RS01640 PF00623 RNA polymerase Rpb1, domain 2 CpN1_RS01640 PF04997 RNA polymerase Rpb1, domain 1 CpN1_RS01640 PF04983 RNA polymerase Rpb1, domain 3 CpN1_RS01645 PF07730 Histidine kinase CpN1_RS01645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpN1_RS01645 PF05231 MASE1 CpN1_RS01650 PF00196 Bacterial regulatory proteins, luxR family CpN1_RS01650 PF00072 Response regulator receiver domain CpN1_RS01660 PF00005 ABC transporter CpN1_RS01675 PF03773 Predicted permease CpN1_RS01680 PF04055 Radical SAM superfamily CpN1_RS01695 PF00164 Ribosomal protein S12/S23 CpN1_RS01700 PF00177 Ribosomal protein S7p/S5e CpN1_RS01705 PF03144 Elongation factor Tu domain 2 CpN1_RS01705 PF00679 Elongation factor G C-terminus CpN1_RS01705 PF14492 Elongation Factor G, domain II CpN1_RS01705 PF03764 Elongation factor G, domain IV CpN1_RS01705 PF00009 Elongation factor Tu GTP binding domain CpN1_RS01710 PF03144 Elongation factor Tu domain 2 CpN1_RS01710 PF00009 Elongation factor Tu GTP binding domain CpN1_RS01710 PF03143 Elongation factor Tu C-terminal domain CpN1_RS01745 PF03780 Asp23 family, cell envelope-related function CpN1_RS01750 PF00338 Ribosomal protein S10p/S20e CpN1_RS01755 PF00297 Ribosomal protein L3 CpN1_RS01760 PF00573 Ribosomal protein L4/L1 family CpN1_RS01765 PF00276 Ribosomal protein L23 CpN1_RS01770 PF00181 Ribosomal Proteins L2, RNA binding domain CpN1_RS01770 PF03947 Ribosomal Proteins L2, C-terminal domain CpN1_RS01775 PF00203 Ribosomal protein S19 CpN1_RS01780 PF00237 Ribosomal protein L22p/L17e CpN1_RS01785 PF07650 KH domain CpN1_RS01785 PF00189 Ribosomal protein S3, C-terminal domain CpN1_RS01790 PF00252 Ribosomal protein L16p/L10e CpN1_RS01795 PF00831 Ribosomal L29 protein CpN1_RS01800 PF00366 Ribosomal protein S17 CpN1_RS01810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CpN1_RS01810 PF00005 ABC transporter CpN1_RS01815 PF12911 N-terminal TM domain of oligopeptide transport permease C CpN1_RS01815 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS01820 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS01825 PF00238 Ribosomal protein L14p/L23e CpN1_RS01830 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CpN1_RS01830 PF00467 KOW motif CpN1_RS01835 PF00673 ribosomal L5P family C-terminus CpN1_RS01835 PF00281 Ribosomal protein L5 CpN1_RS01845 PF03315 Serine dehydratase beta chain CpN1_RS01845 PF03313 Serine dehydratase alpha chain CpN1_RS01850 PF00710 Asparaginase, N-terminal CpN1_RS01850 PF17763 Glutaminase/Asparaginase C-terminal domain CpN1_RS01855 PF01569 PAP2 superfamily CpN1_RS01860 PF00410 Ribosomal protein S8 CpN1_RS01865 PF00347 Ribosomal protein L6 CpN1_RS01870 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CpN1_RS01875 PF03719 Ribosomal protein S5, C-terminal domain CpN1_RS01875 PF00333 Ribosomal protein S5, N-terminal domain CpN1_RS01880 PF00327 Ribosomal protein L30p/L7e CpN1_RS01885 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CpN1_RS01900 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS01905 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS01925 PF00005 ABC transporter CpN1_RS01925 PF17912 MalK OB fold domain CpN1_RS01930 PF00344 SecY translocase CpN1_RS01945 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase CpN1_RS01945 PF00754 F5/8 type C domain CpN1_RS01945 PF13088 BNR repeat-like domain CpN1_RS01960 PF01176 Translation initiation factor 1A / IF-1 CpN1_RS01965 PF00416 Ribosomal protein S13/S18 CpN1_RS01970 PF00411 Ribosomal protein S11 CpN1_RS01975 PF00163 Ribosomal protein S4/S9 N-terminal domain CpN1_RS01975 PF01479 S4 domain CpN1_RS01980 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CpN1_RS01980 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CpN1_RS01980 PF01000 RNA polymerase Rpb3/RpoA insert domain CpN1_RS01985 PF01196 Ribosomal protein L17 CpN1_RS01990 PF01416 tRNA pseudouridine synthase CpN1_RS01995 PF05108 Type VII secretion system ESX-1, transport TM domain B CpN1_RS02005 PF00082 Subtilase family CpN1_RS02015 PF01580 FtsK/SpoIIIE family CpN1_RS02025 PF06013 Proteins of 100 residues with WXG CpN1_RS02030 PF06013 Proteins of 100 residues with WXG CpN1_RS02035 PF00572 Ribosomal protein L13 CpN1_RS02040 PF00380 Ribosomal protein S9/S16 CpN1_RS02045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CpN1_RS02045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CpN1_RS02045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CpN1_RS02045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CpN1_RS02070 PF00842 Alanine racemase, C-terminal domain CpN1_RS02070 PF01168 Alanine racemase, N-terminal domain CpN1_RS02075 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CpN1_RS02080 PF06826 Predicted Permease Membrane Region CpN1_RS02080 PF02080 TrkA-C domain CpN1_RS02090 PF00814 Glycoprotease family CpN1_RS02100 PF00814 Glycoprotease family CpN1_RS02105 PF00166 Chaperonin 10 Kd subunit CpN1_RS02110 PF00118 TCP-1/cpn60 chaperonin family CpN1_RS02115 PF04542 Sigma-70 region 2 CpN1_RS02115 PF08281 Sigma-70, region 4 CpN1_RS02130 PF00571 CBS domain CpN1_RS02130 PF00478 IMP dehydrogenase / GMP reductase domain CpN1_RS02135 PF00478 IMP dehydrogenase / GMP reductase domain CpN1_RS02145 PF00117 Glutamine amidotransferase class-I CpN1_RS02145 PF02540 NAD synthase CpN1_RS02145 PF00958 GMP synthase C terminal domain CpN1_RS02165 PF00196 Bacterial regulatory proteins, luxR family CpN1_RS02165 PF00072 Response regulator receiver domain CpN1_RS02180 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS02185 PF00005 ABC transporter CpN1_RS02185 PF09383 NIL domain CpN1_RS02190 PF03180 NLPA lipoprotein CpN1_RS02195 PF03180 NLPA lipoprotein CpN1_RS02215 PF01297 Zinc-uptake complex component A periplasmic CpN1_RS02220 PF00005 ABC transporter CpN1_RS02225 PF00950 ABC 3 transport family CpN1_RS02230 PF02742 Iron dependent repressor, metal binding and dimerisation domain CpN1_RS02230 PF00950 ABC 3 transport family CpN1_RS02235 PF01325 Iron dependent repressor, N-terminal DNA binding domain CpN1_RS02235 PF02742 Iron dependent repressor, metal binding and dimerisation domain CpN1_RS02235 PF18357 Diphteria toxin repressor SH3 domain CpN1_RS02240 PF00588 SpoU rRNA Methylase family CpN1_RS02245 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CpN1_RS02245 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CpN1_RS02280 PF01032 FecCD transport family CpN1_RS02285 PF00005 ABC transporter CpN1_RS02300 PF03971 Monomeric isocitrate dehydrogenase CpN1_RS02305 PF07690 Major Facilitator Superfamily CpN1_RS02310 PF13411 MerR HTH family regulatory protein CpN1_RS02310 PF06445 GyrI-like small molecule binding domain CpN1_RS02325 PF00579 tRNA synthetases class I (W and Y) CpN1_RS02330 PF03631 Virulence factor BrkB CpN1_RS02335 PF00768 D-alanyl-D-alanine carboxypeptidase CpN1_RS02350 PF00877 NlpC/P60 family CpN1_RS02350 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CpN1_RS02370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CpN1_RS02370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CpN1_RS02370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CpN1_RS02370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CpN1_RS02375 PF01546 Peptidase family M20/M25/M40 CpN1_RS02375 PF04107 Glutamate-cysteine ligase family 2(GCS2) CpN1_RS02380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CpN1_RS02380 PF07992 Pyridine nucleotide-disulphide oxidoreductase CpN1_RS02385 PF00364 Biotin-requiring enzyme CpN1_RS02385 PF02436 Conserved carboxylase domain CpN1_RS02385 PF00682 HMGL-like CpN1_RS02385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CpN1_RS02385 PF00289 Biotin carboxylase, N-terminal domain CpN1_RS02385 PF02785 Biotin carboxylase C-terminal domain CpN1_RS02390 PF07690 Major Facilitator Superfamily CpN1_RS02400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CpN1_RS02400 PF00364 Biotin-requiring enzyme CpN1_RS02400 PF00289 Biotin carboxylase, N-terminal domain CpN1_RS02400 PF02785 Biotin carboxylase C-terminal domain CpN1_RS02405 PF00581 Rhodanese-like domain CpN1_RS02410 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CpN1_RS02410 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CpN1_RS02415 PF01757 Acyltransferase family CpN1_RS02425 PF02545 Maf-like protein CpN1_RS02430 PF00294 pfkB family carbohydrate kinase CpN1_RS02435 PF00356 Bacterial regulatory proteins, lacI family CpN1_RS02445 PF01039 Carboxyl transferase domain CpN1_RS02450 PF01039 Carboxyl transferase domain CpN1_RS02455 PF08279 HTH domain CpN1_RS02455 PF03099 Biotin/lipoate A/B protein ligase family CpN1_RS02455 PF02237 Biotin protein ligase C terminal domain CpN1_RS02465 PF02222 ATP-grasp domain CpN1_RS02465 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CpN1_RS02470 PF00731 AIR carboxylase CpN1_RS02485 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS02490 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS02495 PF01547 Bacterial extracellular solute-binding protein CpN1_RS02505 PF03816 Cell envelope-related transcriptional attenuator domain CpN1_RS02505 PF13399 LytR cell envelope-related transcriptional attenuator CpN1_RS02515 PF00483 Nucleotidyl transferase CpN1_RS02520 PF02467 Transcription factor WhiB CpN1_RS02535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CpN1_RS02535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CpN1_RS02535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CpN1_RS02535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CpN1_RS02545 PF01238 Phosphomannose isomerase type I CpN1_RS02560 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CpN1_RS02560 PF05221 S-adenosyl-L-homocysteine hydrolase CpN1_RS02565 PF02223 Thymidylate kinase CpN1_RS02570 PF00486 Transcriptional regulatory protein, C terminal CpN1_RS02570 PF00072 Response regulator receiver domain CpN1_RS02575 PF00512 His Kinase A (phospho-acceptor) domain CpN1_RS02575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpN1_RS02575 PF00672 HAMP domain CpN1_RS02580 PF10647 Lipoprotein LpqB beta-propeller domain CpN1_RS02590 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CpN1_RS02590 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CpN1_RS02595 PF07517 SecA DEAD-like domain CpN1_RS02595 PF01043 SecA preprotein cross-linking domain CpN1_RS02595 PF07516 SecA Wing and Scaffold domain CpN1_RS02615 PF00970 Oxidoreductase FAD-binding domain CpN1_RS02615 PF00175 Oxidoreductase NAD-binding domain CpN1_RS02615 PF00111 2Fe-2S iron-sulfur cluster binding domain CpN1_RS02620 PF00487 Fatty acid desaturase CpN1_RS02625 PF03193 RsgA GTPase CpN1_RS02630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CpN1_RS02635 PF02586 SOS response associated peptidase (SRAP) CpN1_RS02640 PF04073 Aminoacyl-tRNA editing domain CpN1_RS02645 PF04542 Sigma-70 region 2 CpN1_RS02645 PF08281 Sigma-70, region 4 CpN1_RS02655 PF02467 Transcription factor WhiB CpN1_RS02675 PF00271 Helicase conserved C-terminal domain CpN1_RS02675 PF00270 DEAD/DEAH box helicase CpN1_RS02700 PF13361 UvrD-like helicase C-terminal domain CpN1_RS02700 PF00580 UvrD/REP helicase N-terminal domain CpN1_RS02710 PF09297 NADH pyrophosphatase zinc ribbon domain CpN1_RS02710 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CpN1_RS02710 PF00293 NUDIX domain CpN1_RS02715 PF00570 HRDC domain CpN1_RS02715 PF13361 UvrD-like helicase C-terminal domain CpN1_RS02715 PF00580 UvrD/REP helicase N-terminal domain CpN1_RS02735 PF05362 Lon protease (S16) C-terminal proteolytic domain CpN1_RS02735 PF13180 PDZ domain CpN1_RS02750 PF03699 Uncharacterised protein family (UPF0182) CpN1_RS02790 PF00394 Multicopper oxidase CpN1_RS02790 PF07732 Multicopper oxidase CpN1_RS02810 PF00501 AMP-binding enzyme CpN1_RS02810 PF13193 AMP-binding enzyme C-terminal domain CpN1_RS02810 PF00668 Condensation domain CpN1_RS02810 PF00550 Phosphopantetheine attachment site CpN1_RS02810 PF00975 Thioesterase domain CpN1_RS02820 PF00324 Amino acid permease CpN1_RS02825 PF00682 HMGL-like CpN1_RS02825 PF02436 Conserved carboxylase domain CpN1_RS02830 PF01039 Carboxyl transferase domain CpN1_RS02840 PF00364 Biotin-requiring enzyme CpN1_RS02840 PF02436 Conserved carboxylase domain CpN1_RS02840 PF00682 HMGL-like CpN1_RS02850 PF00459 Inositol monophosphatase family CpN1_RS02855 PF00459 Inositol monophosphatase family CpN1_RS02860 PF00472 RF-1 domain CpN1_RS02860 PF03462 PCRF domain CpN1_RS02870 PF03806 AbgT putative transporter family CpN1_RS02875 PF00005 ABC transporter CpN1_RS02880 PF18075 FtsX extracellular domain CpN1_RS02880 PF02687 FtsX-like permease family CpN1_RS02885 PF01668 SmpB protein CpN1_RS02890 PF00484 Carbonic anhydrase CpN1_RS02900 PF01032 FecCD transport family CpN1_RS02905 PF01032 FecCD transport family CpN1_RS02910 PF00005 ABC transporter CpN1_RS02935 PF00849 RNA pseudouridylate synthase CpN1_RS02935 PF01479 S4 domain CpN1_RS02940 PF00582 Universal stress protein family CpN1_RS02960 PF02096 60Kd inner membrane protein CpN1_RS02965 PF04203 Sortase domain CpN1_RS02975 PF07730 Histidine kinase CpN1_RS02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpN1_RS02980 PF00072 Response regulator receiver domain CpN1_RS02980 PF00196 Bacterial regulatory proteins, luxR family CpN1_RS03000 PF09594 Glycosyltransferase family 87 CpN1_RS03015 PF07690 Major Facilitator Superfamily CpN1_RS03025 PF07690 Major Facilitator Superfamily CpN1_RS03030 PF03358 NADPH-dependent FMN reductase CpN1_RS03035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CpN1_RS03035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CpN1_RS03040 PF01625 Peptide methionine sulfoxide reductase CpN1_RS03045 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CpN1_RS03045 PF00056 lactate/malate dehydrogenase, NAD binding domain CpN1_RS03050 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CpN1_RS03050 PF02885 Glycosyl transferase family, helical bundle domain CpN1_RS03050 PF00591 Glycosyl transferase family, a/b domain CpN1_RS03055 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CpN1_RS03060 PF07662 Na+ dependent nucleoside transporter C-terminus CpN1_RS03060 PF07670 Nucleoside recognition CpN1_RS03060 PF01773 Na+ dependent nucleoside transporter N-terminus CpN1_RS03065 PF03009 Glycerophosphoryl diester phosphodiesterase family CpN1_RS03090 PF03816 Cell envelope-related transcriptional attenuator domain CpN1_RS03100 PF01425 Amidase CpN1_RS03105 PF00800 Prephenate dehydratase CpN1_RS03105 PF01842 ACT domain CpN1_RS03125 PF00392 Bacterial regulatory proteins, gntR family CpN1_RS03125 PF07702 UTRA domain CpN1_RS03130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CpN1_RS03130 PF02403 Seryl-tRNA synthetase N-terminal domain CpN1_RS03150 PF01497 Periplasmic binding protein CpN1_RS03155 PF01032 FecCD transport family CpN1_RS03160 PF00005 ABC transporter CpN1_RS03165 PF03275 UDP-galactopyranose mutase CpN1_RS03170 PF07690 Major Facilitator Superfamily CpN1_RS03175 PF03009 Glycerophosphoryl diester phosphodiesterase family CpN1_RS03185 PF01569 PAP2 superfamily CpN1_RS03195 PF17994 Galactofuranosyltransferase 2 N-terminal CpN1_RS03200 PF01569 PAP2 superfamily CpN1_RS03205 PF01040 UbiA prenyltransferase family CpN1_RS03215 PF00756 Putative esterase CpN1_RS03225 PF08310 LGFP repeat CpN1_RS03225 PF00756 Putative esterase CpN1_RS03235 PF01083 Cutinase CpN1_RS03240 PF00501 AMP-binding enzyme CpN1_RS03245 PF00698 Acyl transferase domain CpN1_RS03245 PF00109 Beta-ketoacyl synthase, N-terminal domain CpN1_RS03245 PF02801 Beta-ketoacyl synthase, C-terminal domain CpN1_RS03245 PF00550 Phosphopantetheine attachment site CpN1_RS03245 PF00975 Thioesterase domain CpN1_RS03245 PF16197 Ketoacyl-synthetase C-terminal extension CpN1_RS03250 PF01039 Carboxyl transferase domain CpN1_RS03255 PF09335 SNARE associated Golgi protein CpN1_RS03275 PF03176 MMPL family CpN1_RS03285 PF02390 Putative methyltransferase CpN1_RS03290 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CpN1_RS03290 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CpN1_RS03295 PF08241 Methyltransferase domain CpN1_RS03300 PF13439 Glycosyltransferase Family 4 CpN1_RS03300 PF00534 Glycosyl transferases group 1 CpN1_RS03315 PF11271 Porin PorA CpN1_RS03320 PF01757 Acyltransferase family CpN1_RS03325 PF11847 Alpha-(1->3)-arabinofuranosyltransferase CpN1_RS03335 PF00933 Glycosyl hydrolase family 3 N terminal domain CpN1_RS03345 PF00171 Aldehyde dehydrogenase family CpN1_RS03355 PF00692 dUTPase CpN1_RS03360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CpN1_RS03360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CpN1_RS03360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CpN1_RS03370 PF12697 Alpha/beta hydrolase family CpN1_RS03375 PF09924 Uncharacterised conserved protein (DUF2156) CpN1_RS03375 PF00152 tRNA synthetases class II (D, K and N) CpN1_RS03375 PF16995 Transmembrane region of lysyl-tRNA synthetase CpN1_RS03375 PF01336 OB-fold nucleic acid binding domain CpN1_RS03385 PF00155 Aminotransferase class I and II CpN1_RS03395 PF00547 Urease, gamma subunit CpN1_RS03400 PF00699 Urease beta subunit CpN1_RS03405 PF01979 Amidohydrolase family CpN1_RS03405 PF00449 Urease alpha-subunit, N-terminal domain CpN1_RS03410 PF02814 UreE urease accessory protein, N-terminal domain CpN1_RS03410 PF05194 UreE urease accessory protein, C-terminal domain CpN1_RS03415 PF01730 UreF CpN1_RS03420 PF02492 CobW/HypB/UreG, nucleotide-binding domain CpN1_RS03425 PF01774 UreD urease accessory protein CpN1_RS03435 PF01032 FecCD transport family CpN1_RS03440 PF00005 ABC transporter CpN1_RS03455 PF02665 Nitrate reductase gamma subunit CpN1_RS03455 PF13183 4Fe-4S dicluster domain CpN1_RS03455 PF02754 Cysteine-rich domain CpN1_RS03465 PF01384 Phosphate transporter family CpN1_RS03480 PF12911 N-terminal TM domain of oligopeptide transport permease C CpN1_RS03480 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS03485 PF00005 ABC transporter CpN1_RS03490 PF01594 AI-2E family transporter CpN1_RS03510 PF00012 Hsp70 protein CpN1_RS03515 PF01025 GrpE CpN1_RS03520 PF00684 DnaJ central domain CpN1_RS03520 PF01556 DnaJ C terminal domain CpN1_RS03520 PF00226 DnaJ domain CpN1_RS03525 PF13411 MerR HTH family regulatory protein CpN1_RS03545 PF08240 Alcohol dehydrogenase GroES-like domain CpN1_RS03545 PF00107 Zinc-binding dehydrogenase CpN1_RS03560 PF00795 Carbon-nitrogen hydrolase CpN1_RS03565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CpN1_RS03570 PF00005 ABC transporter CpN1_RS03575 PF00005 ABC transporter CpN1_RS03575 PF12704 MacB-like periplasmic core domain CpN1_RS03575 PF02687 FtsX-like permease family CpN1_RS03595 PF00561 alpha/beta hydrolase fold CpN1_RS03625 PF00005 ABC transporter CpN1_RS03630 PF00004 ATPase family associated with various cellular activities (AAA) CpN1_RS03630 PF07724 AAA domain (Cdc48 subfamily) CpN1_RS03630 PF17871 AAA lid domain CpN1_RS03630 PF02861 Clp amino terminal domain, pathogenicity island component CpN1_RS03630 PF10431 C-terminal, D2-small domain, of ClpB protein CpN1_RS03665 PF01266 FAD dependent oxidoreductase CpN1_RS03665 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CpN1_RS03670 PF00581 Rhodanese-like domain CpN1_RS03680 PF00156 Phosphoribosyl transferase domain CpN1_RS03695 PF01116 Fructose-bisphosphate aldolase class-II CpN1_RS03700 PF04650 YSIRK type signal peptide CpN1_RS03700 PF17961 Bacterial Ig domain CpN1_RS03700 PF00746 LPXTG cell wall anchor motif CpN1_RS03700 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CpN1_RS03700 PF17210 SdrD B-like domain CpN1_RS03720 PF00005 ABC transporter CpN1_RS03750 PF00709 Adenylosuccinate synthetase CpN1_RS03755 PF03264 NapC/NirT cytochrome c family, N-terminal region CpN1_RS03760 PF02335 Cytochrome c552 CpN1_RS03770 PF05140 ResB-like family CpN1_RS03775 PF01578 Cytochrome C assembly protein CpN1_RS03805 PF00156 Phosphoribosyl transferase domain CpN1_RS03810 PF02222 ATP-grasp domain CpN1_RS03825 PF07992 Pyridine nucleotide-disulphide oxidoreductase CpN1_RS03830 PF01515 Phosphate acetyl/butaryl transferase CpN1_RS03835 PF00871 Acetokinase family CpN1_RS03840 PF00069 Protein kinase domain CpN1_RS03840 PF16919 Protein kinase G rubredoxin domain CpN1_RS03840 PF16918 Protein kinase G tetratricopeptide repeat CpN1_RS03845 PF00497 Bacterial extracellular solute-binding proteins, family 3 CpN1_RS03855 PF00293 NUDIX domain CpN1_RS03860 PF00005 ABC transporter CpN1_RS03870 PF13396 Phospholipase_D-nuclease N-terminal CpN1_RS03870 PF13091 PLD-like domain CpN1_RS03875 PF03372 Endonuclease/Exonuclease/phosphatase family CpN1_RS03880 PF00583 Acetyltransferase (GNAT) family CpN1_RS03885 PF01327 Polypeptide deformylase CpN1_RS03900 PF04107 Glutamate-cysteine ligase family 2(GCS2) CpN1_RS03905 PF09594 Glycosyltransferase family 87 CpN1_RS03925 PF00361 Proton-conducting membrane transporter CpN1_RS03930 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CpN1_RS03935 PF00361 Proton-conducting membrane transporter CpN1_RS03935 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CpN1_RS03935 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CpN1_RS03935 PF13244 Domain of unknown function (DUF4040) CpN1_RS03955 PF01546 Peptidase family M20/M25/M40 CpN1_RS03955 PF07687 Peptidase dimerisation domain CpN1_RS03960 PF00118 TCP-1/cpn60 chaperonin family CpN1_RS03975 PF03976 Polyphosphate kinase 2 (PPK2) CpN1_RS03980 PF00550 Phosphopantetheine attachment site CpN1_RS03980 PF00501 AMP-binding enzyme CpN1_RS03980 PF13193 AMP-binding enzyme C-terminal domain CpN1_RS03980 PF00668 Condensation domain CpN1_RS03995 PF00375 Sodium:dicarboxylate symporter family CpN1_RS04000 PF00581 Rhodanese-like domain CpN1_RS04000 PF01206 Sulfurtransferase TusA CpN1_RS04005 PF00719 Inorganic pyrophosphatase CpN1_RS04010 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CpN1_RS04015 PF09179 TilS substrate binding domain CpN1_RS04015 PF01171 PP-loop family CpN1_RS04020 PF00156 Phosphoribosyl transferase domain CpN1_RS04025 PF00004 ATPase family associated with various cellular activities (AAA) CpN1_RS04025 PF17862 AAA+ lid domain CpN1_RS04025 PF01434 Peptidase family M41 CpN1_RS04030 PF01227 GTP cyclohydrolase I CpN1_RS04035 PF00809 Pterin binding enzyme CpN1_RS04040 PF02152 Dihydroneopterin aldolase CpN1_RS04045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CpN1_RS04065 PF02569 Pantoate-beta-alanine ligase CpN1_RS04070 PF05199 GMC oxidoreductase CpN1_RS04070 PF00732 GMC oxidoreductase CpN1_RS04075 PF02028 BCCT, betaine/carnitine/choline family transporter CpN1_RS04080 PF00171 Aldehyde dehydrogenase family CpN1_RS04085 PF00375 Sodium:dicarboxylate symporter family CpN1_RS04100 PF01336 OB-fold nucleic acid binding domain CpN1_RS04100 PF00152 tRNA synthetases class II (D, K and N) CpN1_RS04115 PF01156 Inosine-uridine preferring nucleoside hydrolase CpN1_RS04120 PF07690 Major Facilitator Superfamily CpN1_RS04130 PF00004 ATPase family associated with various cellular activities (AAA) CpN1_RS04130 PF07724 AAA domain (Cdc48 subfamily) CpN1_RS04130 PF17871 AAA lid domain CpN1_RS04130 PF10431 C-terminal, D2-small domain, of ClpB protein CpN1_RS04130 PF02861 Clp amino terminal domain, pathogenicity island component CpN1_RS04140 PF00730 HhH-GPD superfamily base excision DNA repair protein CpN1_RS04140 PF00633 Helix-hairpin-helix motif CpN1_RS04145 PF00484 Carbonic anhydrase CpN1_RS04155 PF06745 KaiC CpN1_RS04155 PF18073 Rubredoxin metal binding domain CpN1_RS04175 PF02559 CarD-like/TRCF domain CpN1_RS04180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CpN1_RS04185 PF02542 YgbB family CpN1_RS04190 PF01406 tRNA synthetases class I (C) catalytic domain CpN1_RS04190 PF09190 DALR domain CpN1_RS04195 PF08032 RNA 2'-O ribose methyltransferase substrate binding CpN1_RS04195 PF00588 SpoU rRNA Methylase family CpN1_RS04205 PF00356 Bacterial regulatory proteins, lacI family CpN1_RS04220 PF00982 Glycosyltransferase family 20 CpN1_RS04245 PF00205 Thiamine pyrophosphate enzyme, central domain CpN1_RS04245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CpN1_RS04245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CpN1_RS04275 PF00486 Transcriptional regulatory protein, C terminal CpN1_RS04275 PF00072 Response regulator receiver domain CpN1_RS04280 PF00512 His Kinase A (phospho-acceptor) domain CpN1_RS04280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpN1_RS04280 PF00672 HAMP domain CpN1_RS04290 PF01230 HIT domain CpN1_RS04295 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CpN1_RS04295 PF02843 Phosphoribosylglycinamide synthetase, C domain CpN1_RS04295 PF02844 Phosphoribosylglycinamide synthetase, N domain CpN1_RS04300 PF02386 Cation transport protein CpN1_RS04305 PF02080 TrkA-C domain CpN1_RS04305 PF02254 TrkA-N domain CpN1_RS04310 PF00206 Lyase CpN1_RS04310 PF10397 Adenylosuccinate lyase C-terminus CpN1_RS04315 PF01259 SAICAR synthetase CpN1_RS04325 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CpN1_RS04325 PF00326 Prolyl oligopeptidase family CpN1_RS04330 PF00255 Glutathione peroxidase CpN1_RS04335 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CpN1_RS04345 PF00586 AIR synthase related protein, N-terminal domain CpN1_RS04345 PF02769 AIR synthase related protein, C-terminal domain CpN1_RS04345 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CpN1_RS04350 PF03006 Haemolysin-III related CpN1_RS04355 PF00268 Ribonucleotide reductase, small chain CpN1_RS04360 PF07972 NrdI Flavodoxin like CpN1_RS04370 PF00156 Phosphoribosyl transferase domain CpN1_RS04375 PF00586 AIR synthase related protein, N-terminal domain CpN1_RS04375 PF02769 AIR synthase related protein, C-terminal domain CpN1_RS04395 PF08768 Domain of unknown function (DUF1794) CpN1_RS04400 PF00781 Diacylglycerol kinase catalytic domain CpN1_RS04410 PF00583 Acetyltransferase (GNAT) family CpN1_RS04415 PF12849 PBP superfamily domain CpN1_RS04420 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS04430 PF00005 ABC transporter CpN1_RS04440 PF01895 PhoU domain CpN1_RS04445 PF01207 Dihydrouridine synthase (Dus) CpN1_RS04450 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CpN1_RS04450 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CpN1_RS04455 PF00005 ABC transporter CpN1_RS04460 PF00664 ABC transporter transmembrane region CpN1_RS04460 PF00005 ABC transporter CpN1_RS04465 PF02322 Cytochrome bd terminal oxidase subunit II CpN1_RS04470 PF01654 Cytochrome bd terminal oxidase subunit I CpN1_RS04490 PF00465 Iron-containing alcohol dehydrogenase CpN1_RS04510 PF06426 Serine acetyltransferase, N-terminal CpN1_RS04510 PF00132 Bacterial transferase hexapeptide (six repeats) CpN1_RS04515 PF00291 Pyridoxal-phosphate dependent enzyme CpN1_RS04525 PF13185 GAF domain CpN1_RS04525 PF00196 Bacterial regulatory proteins, luxR family CpN1_RS04530 PF01923 Cobalamin adenosyltransferase CpN1_RS04535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CpN1_RS04565 PF18407 GCN5-related N-acetyltransferase like domain CpN1_RS04565 PF13344 Haloacid dehalogenase-like hydrolase CpN1_RS04570 PF01728 FtsJ-like methyltransferase CpN1_RS04570 PF01479 S4 domain CpN1_RS04575 PF01513 ATP-NAD kinase CpN1_RS04580 PF02463 RecF/RecN/SMC N terminal domain CpN1_RS04590 PF11382 Copper transport outer membrane protein, MctB CpN1_RS04595 PF00293 NUDIX domain CpN1_RS04600 PF02899 Phage integrase, N-terminal SAM-like domain CpN1_RS04600 PF00589 Phage integrase family CpN1_RS04605 PF13614 AAA domain CpN1_RS04610 PF02616 Segregation and condensation protein ScpA CpN1_RS04620 PF00854 POT family CpN1_RS04625 PF00202 Aminotransferase class-III CpN1_RS04635 PF04079 Segregation and condensation complex subunit ScpB CpN1_RS04640 PF00849 RNA pseudouridylate synthase CpN1_RS04640 PF01479 S4 domain CpN1_RS04645 PF02224 Cytidylate kinase CpN1_RS04650 PF01926 50S ribosome-binding GTPase CpN1_RS04650 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CpN1_RS04655 PF03605 Anaerobic c4-dicarboxylate membrane transporter CpN1_RS04665 PF00756 Putative esterase CpN1_RS04670 PF09924 Uncharacterised conserved protein (DUF2156) CpN1_RS04675 PF01497 Periplasmic binding protein CpN1_RS04680 PF01032 FecCD transport family CpN1_RS04685 PF01032 FecCD transport family CpN1_RS04690 PF00005 ABC transporter CpN1_RS04695 PF06276 Ferric iron reductase FhuF-like transporter CpN1_RS04695 PF04183 IucA / IucC family CpN1_RS04725 PF07517 SecA DEAD-like domain CpN1_RS04725 PF07516 SecA Wing and Scaffold domain CpN1_RS04725 PF01043 SecA preprotein cross-linking domain CpN1_RS04730 PF00498 FHA domain CpN1_RS04735 PF00376 MerR family regulatory protein CpN1_RS04745 PF13411 MerR HTH family regulatory protein CpN1_RS04760 PF01595 Cyclin M transmembrane N-terminal domain CpN1_RS04760 PF00571 CBS domain CpN1_RS04765 PF03471 Transporter associated domain CpN1_RS04765 PF00571 CBS domain CpN1_RS04765 PF01595 Cyclin M transmembrane N-terminal domain CpN1_RS04770 PF00271 Helicase conserved C-terminal domain CpN1_RS04770 PF00270 DEAD/DEAH box helicase CpN1_RS04775 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CpN1_RS04775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CpN1_RS04780 PF03061 Thioesterase superfamily CpN1_RS04785 PF01544 CorA-like Mg2+ transporter protein CpN1_RS04805 PF00083 Sugar (and other) transporter CpN1_RS04805 PF07690 Major Facilitator Superfamily CpN1_RS04825 PF13397 RNA polymerase-binding protein CpN1_RS04830 PF00535 Glycosyl transferase family 2 CpN1_RS04835 PF00535 Glycosyl transferase family 2 CpN1_RS04835 PF00795 Carbon-nitrogen hydrolase CpN1_RS04845 PF02514 CobN/Magnesium Chelatase CpN1_RS04850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CpN1_RS04850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CpN1_RS04855 PF02570 Precorrin-8X methylmutase CpN1_RS04860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpN1_RS04865 PF02571 Precorrin-6x reductase CbiJ/CobK CpN1_RS04870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpN1_RS04875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpN1_RS04880 PF00106 short chain dehydrogenase CpN1_RS04885 PF01321 Creatinase/Prolidase N-terminal domain CpN1_RS04885 PF00557 Metallopeptidase family M24 CpN1_RS04890 PF00270 DEAD/DEAH box helicase CpN1_RS04890 PF08148 DSHCT (NUC185) domain CpN1_RS04890 PF00271 Helicase conserved C-terminal domain CpN1_RS04895 PF00902 Sec-independent protein translocase protein (TatC) CpN1_RS04900 PF02416 mttA/Hcf106 family CpN1_RS04905 PF13280 WYL domain CpN1_RS04915 PF03136 Pup-ligase protein CpN1_RS04920 PF05639 Pup-like protein CpN1_RS04925 PF03136 Pup-ligase protein CpN1_RS04930 PF00004 ATPase family associated with various cellular activities (AAA) CpN1_RS04930 PF16450 Proteasomal ATPase OB C-terminal domain CpN1_RS04930 PF17758 Proteasomal ATPase OB N-terminal domain CpN1_RS04935 PF08704 tRNA methyltransferase complex GCD14 subunit CpN1_RS04940 PF02127 Aminopeptidase I zinc metalloprotease (M18) CpN1_RS04955 PF01268 Formate--tetrahydrofolate ligase CpN1_RS04960 PF00206 Lyase CpN1_RS04960 PF10415 Fumarase C C-terminus CpN1_RS04965 PF03605 Anaerobic c4-dicarboxylate membrane transporter CpN1_RS04970 PF01634 ATP phosphoribosyltransferase CpN1_RS04970 PF08029 HisG, C-terminal domain CpN1_RS04975 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CpN1_RS04980 PF13419 Haloacid dehalogenase-like hydrolase CpN1_RS04985 PF02607 B12 binding domain CpN1_RS04985 PF02965 Vitamin B12 dependent methionine synthase, activation domain CpN1_RS04985 PF02574 Homocysteine S-methyltransferase CpN1_RS04985 PF00809 Pterin binding enzyme CpN1_RS04985 PF02310 B12 binding domain CpN1_RS04995 PF01406 tRNA synthetases class I (C) catalytic domain CpN1_RS05000 PF02673 Bacitracin resistance protein BacA CpN1_RS05005 PF00248 Aldo/keto reductase family CpN1_RS05015 PF01180 Dihydroorotate dehydrogenase CpN1_RS05030 PF01161 Phosphatidylethanolamine-binding protein CpN1_RS05035 PF00391 PEP-utilising enzyme, mobile domain CpN1_RS05035 PF03610 PTS system fructose IIA component CpN1_RS05035 PF05524 PEP-utilising enzyme, N-terminal CpN1_RS05035 PF00381 PTS HPr component phosphorylation site CpN1_RS05040 PF02734 DAK2 domain CpN1_RS05045 PF02733 Dak1 domain CpN1_RS05055 PF00005 ABC transporter CpN1_RS05055 PF16326 ABC transporter C-terminal domain CpN1_RS05065 PF00106 short chain dehydrogenase CpN1_RS05075 PF01642 Methylmalonyl-CoA mutase CpN1_RS05075 PF02310 B12 binding domain CpN1_RS05080 PF01642 Methylmalonyl-CoA mutase CpN1_RS05085 PF09335 SNARE associated Golgi protein CpN1_RS05095 PF01145 SPFH domain / Band 7 family CpN1_RS05115 PF00762 Ferrochelatase CpN1_RS05120 PF00877 NlpC/P60 family CpN1_RS05130 PF00694 Aconitase C-terminal domain CpN1_RS05130 PF00330 Aconitase family (aconitate hydratase) CpN1_RS05135 PF00440 Bacterial regulatory proteins, tetR family CpN1_RS05150 PF05167 Uncharacterised ACR (DUF711) CpN1_RS05170 PF16326 ABC transporter C-terminal domain CpN1_RS05170 PF12848 ABC transporter CpN1_RS05170 PF00005 ABC transporter CpN1_RS05175 PF01883 Iron-sulfur cluster assembly protein CpN1_RS05180 PF01592 NifU-like N terminal domain CpN1_RS05185 PF00266 Aminotransferase class-V CpN1_RS05190 PF00005 ABC transporter CpN1_RS05195 PF01458 Uncharacterized protein family (UPF0051) CpN1_RS05200 PF01458 Uncharacterized protein family (UPF0051) CpN1_RS05215 PF13732 Domain of unknown function (DUF4162) CpN1_RS05215 PF00005 ABC transporter CpN1_RS05230 PF01040 UbiA prenyltransferase family CpN1_RS05235 PF02779 Transketolase, pyrimidine binding domain CpN1_RS05235 PF00456 Transketolase, thiamine diphosphate binding domain CpN1_RS05235 PF02780 Transketolase, C-terminal domain CpN1_RS05240 PF00923 Transaldolase/Fructose-6-phosphate aldolase CpN1_RS05245 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CpN1_RS05245 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CpN1_RS05255 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CpN1_RS05260 PF03840 Preprotein translocase SecG subunit CpN1_RS05265 PF00311 Phosphoenolpyruvate carboxylase CpN1_RS05270 PF00121 Triosephosphate isomerase CpN1_RS05275 PF00162 Phosphoglycerate kinase CpN1_RS05280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CpN1_RS05280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CpN1_RS05285 PF14527 WhiA LAGLIDADG-like domain CpN1_RS05285 PF02650 WhiA C-terminal HTH domain CpN1_RS05285 PF10298 WhiA N-terminal LAGLIDADG-like domain CpN1_RS05290 PF01933 Uncharacterised protein family UPF0052 CpN1_RS05295 PF03668 P-loop ATPase protein family CpN1_RS05300 PF08459 UvrC Helix-hairpin-helix N-terminal CpN1_RS05300 PF01541 GIY-YIG catalytic domain CpN1_RS05300 PF02151 UvrB/uvrC motif CpN1_RS05305 PF10756 Bacterial PH domain CpN1_RS05310 PF00885 6,7-dimethyl-8-ribityllumazine synthase CpN1_RS05315 PF00925 GTP cyclohydrolase II CpN1_RS05315 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CpN1_RS05320 PF00677 Lumazine binding domain CpN1_RS05325 PF01872 RibD C-terminal domain CpN1_RS05325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CpN1_RS05330 PF00834 Ribulose-phosphate 3 epimerase family CpN1_RS05335 PF01189 16S rRNA methyltransferase RsmB/F CpN1_RS05335 PF01029 NusB family CpN1_RS05340 PF00551 Formyl transferase CpN1_RS05340 PF02911 Formyl transferase, C-terminal domain CpN1_RS05345 PF01327 Polypeptide deformylase CpN1_RS05350 PF17764 3′ DNA-binding domain (3′BD) CpN1_RS05355 PF00438 S-adenosylmethionine synthetase, N-terminal domain CpN1_RS05355 PF02772 S-adenosylmethionine synthetase, central domain CpN1_RS05355 PF02773 S-adenosylmethionine synthetase, C-terminal domain CpN1_RS05360 PF02441 Flavoprotein CpN1_RS05360 PF04127 DNA / pantothenate metabolism flavoprotein CpN1_RS05365 PF01192 RNA polymerase Rpb6 CpN1_RS05370 PF00625 Guanylate kinase CpN1_RS05380 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CpN1_RS05385 PF02142 MGS-like domain CpN1_RS05385 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CpN1_RS05385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CpN1_RS05390 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CpN1_RS05390 PF00117 Glutamine amidotransferase class-I CpN1_RS05395 PF01979 Amidohydrolase family CpN1_RS05400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CpN1_RS05400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CpN1_RS05405 PF00156 Phosphoribosyl transferase domain CpN1_RS05410 PF01370 NAD dependent epimerase/dehydratase family CpN1_RS05410 PF08338 Domain of unknown function (DUF1731) CpN1_RS05425 PF01029 NusB family CpN1_RS05430 PF08207 Elongation factor P (EF-P) KOW-like domain CpN1_RS05430 PF01132 Elongation factor P (EF-P) OB domain CpN1_RS05430 PF09285 Elongation factor P, C-terminal CpN1_RS05435 PF01321 Creatinase/Prolidase N-terminal domain CpN1_RS05435 PF00557 Metallopeptidase family M24 CpN1_RS05440 PF01220 Dehydroquinase class II CpN1_RS05445 PF01761 3-dehydroquinate synthase CpN1_RS05450 PF01202 Shikimate kinase CpN1_RS05455 PF01264 Chorismate synthase CpN1_RS05465 PF08501 Shikimate dehydrogenase substrate binding domain CpN1_RS05465 PF01488 Shikimate / quinate 5-dehydrogenase CpN1_RS05465 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CpN1_RS05475 PF03652 Holliday junction resolvase CpN1_RS05480 PF01411 tRNA synthetases class II (A) CpN1_RS05480 PF02272 DHHA1 domain CpN1_RS05480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CpN1_RS05485 PF12002 MgsA AAA+ ATPase C terminal CpN1_RS05485 PF16193 AAA C-terminal domain CpN1_RS05485 PF00004 ATPase family associated with various cellular activities (AAA) CpN1_RS05495 PF02938 GAD domain CpN1_RS05495 PF01336 OB-fold nucleic acid binding domain CpN1_RS05495 PF00152 tRNA synthetases class II (D, K and N) CpN1_RS05500 PF04228 Putative neutral zinc metallopeptidase CpN1_RS05505 PF00176 SNF2 family N-terminal domain CpN1_RS05505 PF04434 SWIM zinc finger CpN1_RS05505 PF00271 Helicase conserved C-terminal domain CpN1_RS05525 PF03358 NADPH-dependent FMN reductase CpN1_RS05530 PF03315 Serine dehydratase beta chain CpN1_RS05530 PF03313 Serine dehydratase alpha chain CpN1_RS05535 PF03328 HpcH/HpaI aldolase/citrate lyase family CpN1_RS05545 PF02515 CoA-transferase family III CpN1_RS05550 PF03129 Anticodon binding domain CpN1_RS05550 PF13393 Histidyl-tRNA synthetase CpN1_RS05555 PF00753 Metallo-beta-lactamase superfamily CpN1_RS05560 PF08534 Redoxin CpN1_RS05565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CpN1_RS05575 PF02824 TGS domain CpN1_RS05575 PF04607 Region found in RelA / SpoT proteins CpN1_RS05575 PF13291 ACT domain CpN1_RS05580 PF00156 Phosphoribosyl transferase domain CpN1_RS05585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CpN1_RS05590 PF07549 SecD/SecF GG Motif CpN1_RS05590 PF02355 Protein export membrane protein CpN1_RS05595 PF02355 Protein export membrane protein CpN1_RS05595 PF07549 SecD/SecF GG Motif CpN1_RS05605 PF17864 RuvB AAA lid domain CpN1_RS05605 PF05496 Holliday junction DNA helicase RuvB P-loop domain CpN1_RS05605 PF05491 RuvB C-terminal winged helix domain CpN1_RS05610 PF01330 RuvA N terminal domain CpN1_RS05610 PF07499 RuvA, C-terminal domain CpN1_RS05615 PF02075 Crossover junction endodeoxyribonuclease RuvC CpN1_RS05620 PF01709 Transcriptional regulator CpN1_RS05635 PF03744 6-carboxyhexanoate--CoA ligase CpN1_RS05640 PF00155 Aminotransferase class I and II CpN1_RS05640 PF03744 6-carboxyhexanoate--CoA ligase CpN1_RS05650 PF13439 Glycosyltransferase Family 4 CpN1_RS05655 PF03279 Bacterial lipid A biosynthesis acyltransferase CpN1_RS05660 PF01066 CDP-alcohol phosphatidyltransferase CpN1_RS05665 PF01230 HIT domain CpN1_RS05670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CpN1_RS05670 PF03129 Anticodon binding domain CpN1_RS05670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CpN1_RS05675 PF04261 Dyp-type peroxidase family CpN1_RS05675 PF10518 TAT (twin-arginine translocation) pathway signal sequence CpN1_RS05720 PF09594 Glycosyltransferase family 87 CpN1_RS05725 PF01641 SelR domain CpN1_RS05730 PF06778 Chlorite dismutase CpN1_RS05745 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CpN1_RS05745 PF02780 Transketolase, C-terminal domain CpN1_RS05745 PF02779 Transketolase, pyrimidine binding domain CpN1_RS05750 PF05958 tRNA (Uracil-5-)-methyltransferase CpN1_RS05750 PF01938 TRAM domain CpN1_RS05765 PF00692 dUTPase CpN1_RS05780 PF00459 Inositol monophosphatase family CpN1_RS05785 PF00480 ROK family CpN1_RS05790 PF04545 Sigma-70, region 4 CpN1_RS05790 PF04539 Sigma-70 region 3 CpN1_RS05790 PF04542 Sigma-70 region 2 CpN1_RS05790 PF00140 Sigma-70 factor, region 1.2 CpN1_RS05800 PF04851 Type III restriction enzyme, res subunit CpN1_RS05815 PF05175 Methyltransferase small domain CpN1_RS05815 PF17827 PrmC N-terminal domain CpN1_RS05820 PF02580 D-Tyr-tRNA(Tyr) deacylase CpN1_RS05825 PF04545 Sigma-70, region 4 CpN1_RS05825 PF04539 Sigma-70 region 3 CpN1_RS05825 PF04542 Sigma-70 region 2 CpN1_RS05825 PF00140 Sigma-70 factor, region 1.2 CpN1_RS05830 PF01325 Iron dependent repressor, N-terminal DNA binding domain CpN1_RS05830 PF18357 Diphteria toxin repressor SH3 domain CpN1_RS05830 PF02742 Iron dependent repressor, metal binding and dimerisation domain CpN1_RS05835 PF01370 NAD dependent epimerase/dehydratase family CpN1_RS05850 PF00270 DEAD/DEAH box helicase CpN1_RS05850 PF00271 Helicase conserved C-terminal domain CpN1_RS05850 PF08148 DSHCT (NUC185) domain CpN1_RS05855 PF02627 Carboxymuconolactone decarboxylase family CpN1_RS05860 PF00578 AhpC/TSA family CpN1_RS05865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CpN1_RS05865 PF03466 LysR substrate binding domain CpN1_RS05875 PF00270 DEAD/DEAH box helicase CpN1_RS05875 PF11898 Domain of unknown function (DUF3418) CpN1_RS05875 PF04408 Helicase associated domain (HA2) CpN1_RS05875 PF00271 Helicase conserved C-terminal domain CpN1_RS05875 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CpN1_RS05880 PF03477 ATP cone domain CpN1_RS05890 PF00717 Peptidase S24-like CpN1_RS05890 PF01726 LexA DNA binding domain CpN1_RS05895 PF00455 DeoR C terminal sensor domain CpN1_RS05895 PF08220 DeoR-like helix-turn-helix domain CpN1_RS05900 PF00391 PEP-utilising enzyme, mobile domain CpN1_RS05900 PF05524 PEP-utilising enzyme, N-terminal CpN1_RS05900 PF02896 PEP-utilising enzyme, TIM barrel domain CpN1_RS05905 PF08220 DeoR-like helix-turn-helix domain CpN1_RS05905 PF00455 DeoR C terminal sensor domain CpN1_RS05910 PF00294 pfkB family carbohydrate kinase CpN1_RS05915 PF02378 Phosphotransferase system, EIIC CpN1_RS05915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CpN1_RS05920 PF00381 PTS HPr component phosphorylation site CpN1_RS05925 PF00296 Luciferase-like monooxygenase CpN1_RS05930 PF03358 NADPH-dependent FMN reductase CpN1_RS05935 PF00860 Permease family CpN1_RS05940 PF16360 GTP-binding GTPase Middle Region CpN1_RS05940 PF01926 50S ribosome-binding GTPase CpN1_RS05940 PF13167 GTP-binding GTPase N-terminal CpN1_RS05955 PF01678 Diaminopimelate epimerase CpN1_RS05970 PF03993 Domain of Unknown Function (DUF349) CpN1_RS05985 PF00919 Uncharacterized protein family UPF0004 CpN1_RS05985 PF04055 Radical SAM superfamily CpN1_RS05990 PF02631 RecX family CpN1_RS05995 PF00154 recA bacterial DNA recombination protein CpN1_RS06000 PF11248 Protein of unknown function (DUF3046) CpN1_RS06005 PF02632 BioY family CpN1_RS06010 PF00005 ABC transporter CpN1_RS06015 PF02361 Cobalt transport protein CpN1_RS06020 PF04012 PspA/IM30 family CpN1_RS06030 PF02464 Competence-damaged protein CpN1_RS06030 PF00994 Probable molybdopterin binding domain CpN1_RS06030 PF18146 Damage-inducible protein CinA KH domain CpN1_RS06035 PF01066 CDP-alcohol phosphatidyltransferase CpN1_RS06045 PF03741 Integral membrane protein TerC family CpN1_RS06050 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CpN1_RS06050 PF09397 Ftsk gamma domain CpN1_RS06050 PF17854 FtsK alpha domain CpN1_RS06050 PF01580 FtsK/SpoIIIE family CpN1_RS06060 PF12706 Beta-lactamase superfamily domain CpN1_RS06060 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CpN1_RS06060 PF17770 Ribonuclease J C-terminal domain CpN1_RS06065 PF00701 Dihydrodipicolinate synthetase family CpN1_RS06070 PF02511 Thymidylate synthase complementing protein CpN1_RS06075 PF01113 Dihydrodipicolinate reductase, N-terminus CpN1_RS06075 PF05173 Dihydrodipicolinate reductase, C-terminus CpN1_RS06080 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CpN1_RS06080 PF00575 S1 RNA binding domain CpN1_RS06080 PF00013 KH domain CpN1_RS06080 PF01138 3' exoribonuclease family, domain 1 CpN1_RS06085 PF00312 Ribosomal protein S15 CpN1_RS06090 PF01156 Inosine-uridine preferring nucleoside hydrolase CpN1_RS06095 PF01687 Riboflavin kinase CpN1_RS06095 PF06574 FAD synthetase CpN1_RS06100 PF09142 tRNA Pseudouridine synthase II, C terminal CpN1_RS06100 PF01509 TruB family pseudouridylate synthase (N terminal domain) CpN1_RS06100 PF16198 tRNA pseudouridylate synthase B C-terminal domain CpN1_RS06105 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CpN1_RS06105 PF01648 4'-phosphopantetheinyl transferase superfamily CpN1_RS06110 PF00149 Calcineurin-like phosphoesterase CpN1_RS06115 PF01554 MatE CpN1_RS06125 PF02033 Ribosome-binding factor A CpN1_RS06130 PF04760 Translation initiation factor IF-2, N-terminal region CpN1_RS06130 PF11987 Translation-initiation factor 2 CpN1_RS06130 PF00009 Elongation factor Tu GTP binding domain CpN1_RS06140 PF13184 NusA-like KH domain CpN1_RS06140 PF08529 NusA N-terminal domain CpN1_RS06145 PF02576 RimP N-terminal domain CpN1_RS06155 PF04073 Aminoacyl-tRNA editing domain CpN1_RS06155 PF03129 Anticodon binding domain CpN1_RS06155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CpN1_RS06160 PF03883 Peroxide stress protein YaaA CpN1_RS06165 PF10414 Sirohaem synthase dimerisation region CpN1_RS06165 PF14824 Sirohaem biosynthesis protein central CpN1_RS06165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpN1_RS06170 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CpN1_RS06175 PF02492 CobW/HypB/UreG, nucleotide-binding domain CpN1_RS06175 PF07683 Cobalamin synthesis protein cobW C-terminal domain CpN1_RS06180 PF12833 Helix-turn-helix domain CpN1_RS06180 PF02805 Metal binding domain of Ada CpN1_RS06180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CpN1_RS06180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CpN1_RS06185 PF07685 CobB/CobQ-like glutamine amidotransferase domain CpN1_RS06185 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CpN1_RS06190 PF12557 Cob(I)alamin adenosyltransferase N terminal CpN1_RS06190 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CpN1_RS06195 PF13519 von Willebrand factor type A domain CpN1_RS06195 PF17863 AAA lid domain CpN1_RS06195 PF07728 AAA domain (dynein-related subfamily) CpN1_RS06200 PF07728 AAA domain (dynein-related subfamily) CpN1_RS06200 PF17863 AAA lid domain CpN1_RS06200 PF13519 von Willebrand factor type A domain CpN1_RS06205 PF06039 Malate:quinone oxidoreductase (Mqo) CpN1_RS06215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CpN1_RS06215 PF07992 Pyridine nucleotide-disulphide oxidoreductase CpN1_RS06225 PF07685 CobB/CobQ-like glutamine amidotransferase domain CpN1_RS06225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CpN1_RS06230 PF00557 Metallopeptidase family M24 CpN1_RS06240 PF04551 GcpE protein CpN1_RS06245 PF17820 PDZ domain CpN1_RS06245 PF02163 Peptidase family M50 CpN1_RS06250 PF13288 DXP reductoisomerase C-terminal domain CpN1_RS06250 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CpN1_RS06250 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CpN1_RS06255 PF10939 Protein of unknown function (DUF2631) CpN1_RS06260 PF04055 Radical SAM superfamily CpN1_RS06275 PF01765 Ribosome recycling factor CpN1_RS06280 PF00696 Amino acid kinase family CpN1_RS06285 PF00889 Elongation factor TS CpN1_RS06290 PF00318 Ribosomal protein S2 CpN1_RS06295 PF01551 Peptidase family M23 CpN1_RS06300 PF02899 Phage integrase, N-terminal SAM-like domain CpN1_RS06300 PF00589 Phage integrase family CpN1_RS06305 PF02481 DNA recombination-mediator protein A CpN1_RS06305 PF17782 DprA winged helix domain CpN1_RS06310 PF13335 Magnesium chelatase, subunit ChlI C-terminal CpN1_RS06310 PF01078 Magnesium chelatase, subunit ChlI CpN1_RS06315 PF10611 Protein of unknown function (DUF2469) CpN1_RS06320 PF01351 Ribonuclease HII CpN1_RS06325 PF10502 Signal peptidase, peptidase S26 CpN1_RS06330 PF01245 Ribosomal protein L19 CpN1_RS06335 PF16921 Tex protein YqgF-like domain CpN1_RS06335 PF09371 Tex-like protein N-terminal domain CpN1_RS06335 PF00575 S1 RNA binding domain CpN1_RS06335 PF17674 HHH domain CpN1_RS06340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CpN1_RS06340 PF02378 Phosphotransferase system, EIIC CpN1_RS06340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CpN1_RS06350 PF01746 tRNA (Guanine-1)-methyltransferase CpN1_RS06355 PF05239 PRC-barrel domain CpN1_RS06355 PF01782 RimM N-terminal domain CpN1_RS06365 PF00886 Ribosomal protein S16 CpN1_RS06370 PF02978 Signal peptide binding domain CpN1_RS06370 PF00448 SRP54-type protein, GTPase domain CpN1_RS06370 PF02881 SRP54-type protein, helical bundle domain CpN1_RS06375 PF01966 HD domain CpN1_RS06375 PF01909 Nucleotidyltransferase domain CpN1_RS06380 PF00543 Nitrogen regulatory protein P-II CpN1_RS06385 PF00448 SRP54-type protein, GTPase domain CpN1_RS06385 PF02881 SRP54-type protein, helical bundle domain CpN1_RS06395 PF02463 RecF/RecN/SMC N terminal domain CpN1_RS06395 PF06470 SMC proteins Flexible Hinge Domain CpN1_RS06400 PF00708 Acylphosphatase CpN1_RS06405 PF01235 Sodium:alanine symporter family CpN1_RS06410 PF06827 Zinc finger found in FPG and IleRS CpN1_RS06410 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CpN1_RS06410 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CpN1_RS06415 PF00035 Double-stranded RNA binding motif CpN1_RS06415 PF14622 Ribonuclease-III-like CpN1_RS06420 PF02620 Large ribosomal RNA subunit accumulation protein YceD CpN1_RS06435 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CpN1_RS06435 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CpN1_RS06440 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CpN1_RS06440 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CpN1_RS06445 PF02595 Glycerate kinase family CpN1_RS06460 PF07687 Peptidase dimerisation domain CpN1_RS06460 PF01546 Peptidase family M20/M25/M40 CpN1_RS06465 PF00343 Carbohydrate phosphorylase CpN1_RS06475 PF00224 Pyruvate kinase, barrel domain CpN1_RS06475 PF02887 Pyruvate kinase, alpha/beta domain CpN1_RS06480 PF01790 Prolipoprotein diacylglyceryl transferase CpN1_RS06485 PF00218 Indole-3-glycerol phosphate synthase CpN1_RS06495 PF01502 Phosphoribosyl-AMP cyclohydrolase CpN1_RS06500 PF00977 Histidine biosynthesis protein CpN1_RS06505 PF00459 Inositol monophosphatase family CpN1_RS06510 PF00977 Histidine biosynthesis protein CpN1_RS06515 PF00117 Glutamine amidotransferase class-I CpN1_RS06530 PF00475 Imidazoleglycerol-phosphate dehydratase CpN1_RS06535 PF00155 Aminotransferase class I and II CpN1_RS06540 PF00815 Histidinol dehydrogenase CpN1_RS06560 PF00440 Bacterial regulatory proteins, tetR family CpN1_RS06560 PF02909 Tetracyclin repressor-like, C-terminal domain CpN1_RS06565 PF00128 Alpha amylase, catalytic domain CpN1_RS06565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CpN1_RS06570 PF07733 Bacterial DNA polymerase III alpha NTPase domain CpN1_RS06570 PF14480 DNA polymerase III polC-type N-terminus I CpN1_RS06570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CpN1_RS06570 PF02811 PHP domain CpN1_RS06570 PF00929 Exonuclease CpN1_RS06570 PF11490 DNA polymerase III polC-type N-terminus II CpN1_RS06570 PF14579 Helix-hairpin-helix motif CpN1_RS06595 PF09186 Domain of unknown function (DUF1949) CpN1_RS06595 PF01205 Uncharacterized protein family UPF0029 CpN1_RS06600 PF00585 C-terminal regulatory domain of Threonine dehydratase CpN1_RS06600 PF00291 Pyridoxal-phosphate dependent enzyme CpN1_RS06605 PF02811 PHP domain CpN1_RS06605 PF14579 Helix-hairpin-helix motif CpN1_RS06605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CpN1_RS06605 PF07733 Bacterial DNA polymerase III alpha NTPase domain CpN1_RS06610 PF00892 EamA-like transporter family CpN1_RS06620 PF00849 RNA pseudouridylate synthase CpN1_RS06625 PF01252 Signal peptidase (SPase) II CpN1_RS06640 PF00710 Asparaginase, N-terminal CpN1_RS06640 PF17763 Glutaminase/Asparaginase C-terminal domain CpN1_RS06645 PF11799 impB/mucB/samB family C-terminal domain CpN1_RS06645 PF11798 IMS family HHH motif CpN1_RS06645 PF00817 impB/mucB/samB family CpN1_RS06650 PF00133 tRNA synthetases class I (I, L, M and V) CpN1_RS06650 PF08264 Anticodon-binding domain of tRNA CpN1_RS06660 PF05103 DivIVA protein CpN1_RS06670 PF04472 Cell division protein SepF CpN1_RS06675 PF02578 Multi-copper polyphenol oxidoreductase laccase CpN1_RS06680 PF12327 FtsZ family, C-terminal domain CpN1_RS06680 PF00091 Tubulin/FtsZ family, GTPase domain CpN1_RS06690 PF01225 Mur ligase family, catalytic domain CpN1_RS06690 PF02875 Mur ligase family, glutamate ligase domain CpN1_RS06690 PF08245 Mur ligase middle domain CpN1_RS06695 PF04101 Glycosyltransferase family 28 C-terminal domain CpN1_RS06695 PF03033 Glycosyltransferase family 28 N-terminal domain CpN1_RS06700 PF01098 Cell cycle protein CpN1_RS06705 PF08245 Mur ligase middle domain CpN1_RS06710 PF00953 Glycosyl transferase family 4 CpN1_RS06710 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CpN1_RS06715 PF08245 Mur ligase middle domain CpN1_RS06715 PF01225 Mur ligase family, catalytic domain CpN1_RS06715 PF02875 Mur ligase family, glutamate ligase domain CpN1_RS06720 PF02875 Mur ligase family, glutamate ligase domain CpN1_RS06720 PF08245 Mur ligase middle domain CpN1_RS06720 PF01225 Mur ligase family, catalytic domain CpN1_RS06725 PF00905 Penicillin binding protein transpeptidase domain CpN1_RS06725 PF03717 Penicillin-binding Protein dimerisation domain CpN1_RS06735 PF01795 MraW methylase family CpN1_RS06740 PF02381 MraZ protein, putative antitoxin-like CpN1_RS06760 PF02219 Methylenetetrahydrofolate reductase CpN1_RS06765 PF00348 Polyprenyl synthetase CpN1_RS06775 PF18367 Rv2175c C-terminal domain of unknown function CpN1_RS06780 PF03793 PASTA domain CpN1_RS06780 PF00069 Protein kinase domain CpN1_RS06785 PF01474 Class-II DAHP synthetase family CpN1_RS06790 PF16473 3' exoribonuclease, RNase T-like CpN1_RS06805 PF00480 ROK family CpN1_RS06810 PF13439 Glycosyltransferase Family 4 CpN1_RS06810 PF00534 Glycosyl transferases group 1 CpN1_RS06815 PF00877 NlpC/P60 family CpN1_RS06820 PF00877 NlpC/P60 family CpN1_RS06825 PF13631 Cytochrome b(N-terminal)/b6/petB CpN1_RS06830 PF00355 Rieske [2Fe-2S] domain CpN1_RS06835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CpN1_RS06835 PF00034 Cytochrome c CpN1_RS06840 PF00510 Cytochrome c oxidase subunit III CpN1_RS06845 PF12270 Cytochrome c oxidase subunit IV CpN1_RS06850 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CpN1_RS06855 PF13537 Glutamine amidotransferase domain CpN1_RS06855 PF00733 Asparagine synthase CpN1_RS06860 PF01521 Iron-sulphur cluster biosynthesis CpN1_RS06865 PF11241 Protein of unknown function (DUF3043) CpN1_RS06870 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CpN1_RS06875 PF02277 Phosphoribosyltransferase CpN1_RS06880 PF02654 Cobalamin-5-phosphate synthase CpN1_RS06885 PF01063 Amino-transferase class IV CpN1_RS06890 PF00883 Cytosol aminopeptidase family, catalytic domain CpN1_RS06890 PF02789 Cytosol aminopeptidase family, N-terminal domain CpN1_RS06900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CpN1_RS06900 PF00364 Biotin-requiring enzyme CpN1_RS06900 PF02817 e3 binding domain CpN1_RS06905 PF02347 Glycine cleavage system P-protein CpN1_RS06910 PF08669 Glycine cleavage T-protein C-terminal barrel domain CpN1_RS06910 PF01571 Aminomethyltransferase folate-binding domain CpN1_RS06915 PF01597 Glycine cleavage H-protein CpN1_RS06925 PF03099 Biotin/lipoate A/B protein ligase family CpN1_RS06930 PF04055 Radical SAM superfamily CpN1_RS06930 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CpN1_RS06935 PF13829 Domain of unknown function (DUF4191) CpN1_RS06945 PF03951 Glutamine synthetase, beta-Grasp domain CpN1_RS06945 PF00120 Glutamine synthetase, catalytic domain CpN1_RS07015 PF18273 Type III R-M EcoP15I C-terminal domain CpN1_RS07015 PF01555 DNA methylase CpN1_RS07030 PF13361 UvrD-like helicase C-terminal domain CpN1_RS07030 PF00580 UvrD/REP helicase N-terminal domain CpN1_RS07030 PF12705 PD-(D/E)XK nuclease superfamily CpN1_RS07060 PF12704 MacB-like periplasmic core domain CpN1_RS07060 PF02687 FtsX-like permease family CpN1_RS07060 PF00005 ABC transporter CpN1_RS07085 PF00571 CBS domain CpN1_RS07085 PF00478 IMP dehydrogenase / GMP reductase domain CpN1_RS07095 PF13726 Na+-H+ antiporter family CpN1_RS07095 PF03553 Na+/H+ antiporter family CpN1_RS07100 PF00293 NUDIX domain CpN1_RS07100 PF09297 NADH pyrophosphatase zinc ribbon domain CpN1_RS07105 PF14821 Threonine synthase N terminus CpN1_RS07105 PF00291 Pyridoxal-phosphate dependent enzyme CpN1_RS07120 PF01126 Heme oxygenase CpN1_RS07125 PF03710 Glutamate-ammonia ligase adenylyltransferase CpN1_RS07125 PF08335 GlnD PII-uridylyltransferase CpN1_RS07130 PF00120 Glutamine synthetase, catalytic domain CpN1_RS07130 PF03951 Glutamine synthetase, beta-Grasp domain CpN1_RS07140 PF05235 CHAD domain CpN1_RS07140 PF01928 CYTH domain CpN1_RS07155 PF08206 Ribonuclease B OB domain CpN1_RS07155 PF00575 S1 RNA binding domain CpN1_RS07155 PF17876 Cold shock domain CpN1_RS07155 PF00773 RNB domain CpN1_RS07160 PF00300 Histidine phosphatase superfamily (branch 1) CpN1_RS07160 PF13456 Reverse transcriptase-like CpN1_RS07170 PF01784 NIF3 (NGG1p interacting factor 3) CpN1_RS07175 PF00155 Aminotransferase class I and II CpN1_RS07185 PF01451 Low molecular weight phosphotyrosine protein phosphatase CpN1_RS07190 PF02104 SURF1 family CpN1_RS07195 PF03186 CobD/Cbib protein CpN1_RS07195 PF17113 Regulatory signalling modulator protein AmpE CpN1_RS07205 PF11253 Protein of unknown function (DUF3052) CpN1_RS07210 PF17831 Pyruvate dehydrogenase E1 component middle domain CpN1_RS07210 PF00456 Transketolase, thiamine diphosphate binding domain CpN1_RS07215 PF12697 Alpha/beta hydrolase family CpN1_RS07225 PF13344 Haloacid dehalogenase-like hydrolase CpN1_RS07240 PF03458 UPF0126 domain CpN1_RS07265 PF10410 DnaB-helicase binding domain of primase CpN1_RS07265 PF01807 CHC2 zinc finger CpN1_RS07265 PF08275 DNA primase catalytic core, N-terminal domain CpN1_RS07265 PF13662 Toprim domain CpN1_RS07265 PF08278 DNA primase DnaG DnaB-binding CpN1_RS07270 PF01380 SIS domain CpN1_RS07285 PF01966 HD domain CpN1_RS07285 PF13286 Phosphohydrolase-associated domain CpN1_RS07310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CpN1_RS07310 PF03129 Anticodon binding domain CpN1_RS07315 PF01022 Bacterial regulatory protein, arsR family CpN1_RS07320 PF01475 Ferric uptake regulator family CpN1_RS07330 PF01255 Putative undecaprenyl diphosphate synthase CpN1_RS07335 PF02565 Recombination protein O C terminal CpN1_RS07335 PF11967 Recombination protein O N terminal CpN1_RS07340 PF07650 KH domain CpN1_RS07340 PF01926 50S ribosome-binding GTPase CpN1_RS07345 PF08543 Phosphomethylpyrimidine kinase CpN1_RS07350 PF01595 Cyclin M transmembrane N-terminal domain CpN1_RS07350 PF03471 Transporter associated domain CpN1_RS07350 PF00571 CBS domain CpN1_RS07355 PF02130 Uncharacterized protein family UPF0054 CpN1_RS07360 PF02562 PhoH-like protein CpN1_RS07365 PF04452 RNA methyltransferase CpN1_RS07370 PF00226 DnaJ domain CpN1_RS07370 PF00684 DnaJ central domain CpN1_RS07370 PF01556 DnaJ C terminal domain CpN1_RS07375 PF01628 HrcA protein C terminal domain CpN1_RS07380 PF04055 Radical SAM superfamily CpN1_RS07390 PF00501 AMP-binding enzyme CpN1_RS07395 PF02446 4-alpha-glucanotransferase CpN1_RS07405 PF01432 Peptidase family M3 CpN1_RS07410 PF00135 Carboxylesterase family CpN1_RS07415 PF00293 NUDIX domain CpN1_RS07440 PF05525 Branched-chain amino acid transport protein CpN1_RS07445 PF00296 Luciferase-like monooxygenase CpN1_RS07455 PF02028 BCCT, betaine/carnitine/choline family transporter CpN1_RS07470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CpN1_RS07475 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS07480 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS07480 PF12911 N-terminal TM domain of oligopeptide transport permease C CpN1_RS07485 PF00005 ABC transporter CpN1_RS07485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CpN1_RS07490 PF00561 alpha/beta hydrolase fold CpN1_RS07495 PF01168 Alanine racemase, N-terminal domain CpN1_RS07500 PF04143 Sulphur transport CpN1_RS07505 PF12911 N-terminal TM domain of oligopeptide transport permease C CpN1_RS07505 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS07520 PF07690 Major Facilitator Superfamily CpN1_RS07525 PF09383 NIL domain CpN1_RS07525 PF00005 ABC transporter CpN1_RS07530 PF00005 ABC transporter CpN1_RS07530 PF09383 NIL domain CpN1_RS07540 PF06421 GTP-binding protein LepA C-terminus CpN1_RS07540 PF00009 Elongation factor Tu GTP binding domain CpN1_RS07540 PF00679 Elongation factor G C-terminus CpN1_RS07550 PF01649 Ribosomal protein S20 CpN1_RS07555 PF01810 LysE type translocator CpN1_RS07580 PF02645 Uncharacterised protein, DegV family COG1307 CpN1_RS07585 PF00300 Histidine phosphatase superfamily (branch 1) CpN1_RS07595 PF01467 Cytidylyltransferase-like CpN1_RS07600 PF00171 Aldehyde dehydrogenase family CpN1_RS07605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CpN1_RS07610 PF04304 Protein of unknown function (DUF454) CpN1_RS07615 PF02080 TrkA-C domain CpN1_RS07615 PF06826 Predicted Permease Membrane Region CpN1_RS07620 PF01472 PUA domain CpN1_RS07620 PF00696 Amino acid kinase family CpN1_RS07625 PF01018 GTP1/OBG CpN1_RS07625 PF01926 50S ribosome-binding GTPase CpN1_RS07625 PF09269 Domain of unknown function (DUF1967) CpN1_RS07630 PF01016 Ribosomal L27 protein CpN1_RS07635 PF00829 Ribosomal prokaryotic L21 protein CpN1_RS07640 PF10150 Ribonuclease E/G family CpN1_RS07650 PF00334 Nucleoside diphosphate kinase CpN1_RS07655 PF02423 Ornithine cyclodeaminase/mu-crystallin family CpN1_RS07665 PF08245 Mur ligase middle domain CpN1_RS07665 PF02875 Mur ligase family, glutamate ligase domain CpN1_RS07670 PF08264 Anticodon-binding domain of tRNA CpN1_RS07670 PF00133 tRNA synthetases class I (I, L, M and V) CpN1_RS07670 PF10458 Valyl tRNA synthetase tRNA binding arm CpN1_RS07675 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CpN1_RS07675 PF00056 lactate/malate dehydrogenase, NAD binding domain CpN1_RS07685 PF10431 C-terminal, D2-small domain, of ClpB protein CpN1_RS07685 PF07724 AAA domain (Cdc48 subfamily) CpN1_RS07685 PF06689 ClpX C4-type zinc finger CpN1_RS07690 PF04715 Anthranilate synthase component I, N terminal region CpN1_RS07690 PF00425 chorismate binding enzyme CpN1_RS07690 PF00117 Glutamine amidotransferase class-I CpN1_RS07695 PF00574 Clp protease CpN1_RS07700 PF00574 Clp protease CpN1_RS07705 PF05698 Bacterial trigger factor protein (TF) C-terminus CpN1_RS07705 PF05697 Bacterial trigger factor protein (TF) CpN1_RS07730 PF05726 Pirin C-terminal cupin domain CpN1_RS07730 PF02678 Pirin CpN1_RS07735 PF02502 Ribose/Galactose Isomerase CpN1_RS07740 PF01323 DSBA-like thioredoxin domain CpN1_RS07745 PF01433 Peptidase family M1 domain CpN1_RS07745 PF11838 ERAP1-like C-terminal domain CpN1_RS07755 PF00924 Mechanosensitive ion channel CpN1_RS07760 PF01152 Bacterial-like globin CpN1_RS07780 PF00005 ABC transporter CpN1_RS07780 PF12848 ABC transporter CpN1_RS07830 PF00005 ABC transporter CpN1_RS07835 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CpN1_RS07835 PF05425 Copper resistance protein D CpN1_RS07840 PF13722 5TM C-terminal transporter carbon starvation CstA CpN1_RS07840 PF02554 Carbon starvation protein CstA CpN1_RS07850 PF01483 Proprotein convertase P-domain CpN1_RS07850 PF00082 Subtilase family CpN1_RS07855 PF00107 Zinc-binding dehydrogenase CpN1_RS07855 PF08240 Alcohol dehydrogenase GroES-like domain CpN1_RS07860 PF00106 short chain dehydrogenase CpN1_RS07865 PF00929 Exonuclease CpN1_RS07880 PF03734 L,D-transpeptidase catalytic domain CpN1_RS07880 PF17964 Bacterial Ig domain CpN1_RS07890 PF00107 Zinc-binding dehydrogenase CpN1_RS07890 PF16884 N-terminal domain of oxidoreductase CpN1_RS07895 PF00857 Isochorismatase family CpN1_RS07910 PF00578 AhpC/TSA family CpN1_RS07920 PF01648 4'-phosphopantetheinyl transferase superfamily CpN1_RS07925 PF02801 Beta-ketoacyl synthase, C-terminal domain CpN1_RS07925 PF00109 Beta-ketoacyl synthase, N-terminal domain CpN1_RS07940 PF00072 Response regulator receiver domain CpN1_RS07940 PF00196 Bacterial regulatory proteins, luxR family CpN1_RS07945 PF04235 Protein of unknown function (DUF418) CpN1_RS07945 PF07786 Protein of unknown function (DUF1624) CpN1_RS07975 PF01725 Ham1 family CpN1_RS07980 PF03725 3' exoribonuclease family, domain 2 CpN1_RS07980 PF01138 3' exoribonuclease family, domain 1 CpN1_RS07985 PF12706 Beta-lactamase superfamily domain CpN1_RS07990 PF01177 Asp/Glu/Hydantoin racemase CpN1_RS07995 PF01694 Rhomboid family CpN1_RS08000 PF09438 Domain of unknown function (DUF2017) CpN1_RS08005 PF02617 ATP-dependent Clp protease adaptor protein ClpS CpN1_RS08010 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CpN1_RS08010 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CpN1_RS08015 PF13307 Helicase C-terminal domain CpN1_RS08050 PF00115 Cytochrome C and Quinol oxidase polypeptide I CpN1_RS08060 PF00268 Ribonucleotide reductase, small chain CpN1_RS08065 PF00210 Ferritin-like domain CpN1_RS08070 PF02867 Ribonucleotide reductase, barrel domain CpN1_RS08070 PF08343 Ribonucleotide reductase N-terminal CpN1_RS08070 PF00317 Ribonucleotide reductase, all-alpha domain CpN1_RS08075 PF07972 NrdI Flavodoxin like CpN1_RS08080 PF00462 Glutaredoxin CpN1_RS08085 PF00444 Ribosomal protein L36 CpN1_RS08090 PF02540 NAD synthase CpN1_RS08105 PF01022 Bacterial regulatory protein, arsR family CpN1_RS08155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CpN1_RS08155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CpN1_RS08155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CpN1_RS08155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CpN1_RS08160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CpN1_RS08165 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CpN1_RS08170 PF00005 ABC transporter CpN1_RS08170 PF02687 FtsX-like permease family CpN1_RS08170 PF12704 MacB-like periplasmic core domain CpN1_RS08175 PF02687 FtsX-like permease family CpN1_RS08175 PF00005 ABC transporter CpN1_RS08175 PF12704 MacB-like periplasmic core domain CpN1_RS08200 PF00579 tRNA synthetases class I (W and Y) CpN1_RS08205 PF03966 Trm112p-like protein CpN1_RS08210 PF00206 Lyase CpN1_RS08210 PF14698 Argininosuccinate lyase C-terminal CpN1_RS08215 PF00764 Arginosuccinate synthase CpN1_RS08220 PF01316 Arginine repressor, DNA binding domain CpN1_RS08220 PF02863 Arginine repressor, C-terminal domain CpN1_RS08225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CpN1_RS08225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CpN1_RS08230 PF00202 Aminotransferase class-III CpN1_RS08235 PF00696 Amino acid kinase family CpN1_RS08240 PF01960 ArgJ family CpN1_RS08245 PF02774 Semialdehyde dehydrogenase, dimerisation domain CpN1_RS08245 PF01118 Semialdehyde dehydrogenase, NAD binding domain CpN1_RS08250 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CpN1_RS08250 PF03147 Ferredoxin-fold anticodon binding domain CpN1_RS08250 PF03484 tRNA synthetase B5 domain CpN1_RS08250 PF03483 B3/4 domain CpN1_RS08250 PF01588 Putative tRNA binding domain CpN1_RS08255 PF01409 tRNA synthetases class II core domain (F) CpN1_RS08255 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CpN1_RS08260 PF00588 SpoU rRNA Methylase family CpN1_RS08260 PF08032 RNA 2'-O ribose methyltransferase substrate binding CpN1_RS08270 PF00453 Ribosomal protein L20 CpN1_RS08275 PF01632 Ribosomal protein L35 CpN1_RS08280 PF00707 Translation initiation factor IF-3, C-terminal domain CpN1_RS08280 PF05198 Translation initiation factor IF-3, N-terminal domain CpN1_RS08285 PF17755 UvrA DNA-binding domain CpN1_RS08285 PF00005 ABC transporter CpN1_RS08285 PF17760 UvrA interaction domain CpN1_RS08290 PF16123 Hydroxyacylglutathione hydrolase C-terminus CpN1_RS08290 PF00753 Metallo-beta-lactamase superfamily CpN1_RS08300 PF13538 UvrD-like helicase C-terminal domain CpN1_RS08305 PF00582 Universal stress protein family CpN1_RS08310 PF00271 Helicase conserved C-terminal domain CpN1_RS08310 PF17757 UvrB interaction domain CpN1_RS08310 PF04851 Type III restriction enzyme, res subunit CpN1_RS08310 PF12344 Ultra-violet resistance protein B CpN1_RS08310 PF02151 UvrB/uvrC motif CpN1_RS08320 PF01121 Dephospho-CoA kinase CpN1_RS08325 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CpN1_RS08325 PF02378 Phosphotransferase system, EIIC CpN1_RS08325 PF00367 phosphotransferase system, EIIB CpN1_RS08330 PF00575 S1 RNA binding domain CpN1_RS08335 PF01209 ubiE/COQ5 methyltransferase family CpN1_RS08340 PF01367 5'-3' exonuclease, C-terminal SAM fold CpN1_RS08340 PF00476 DNA polymerase family A CpN1_RS08340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CpN1_RS08360 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS08365 PF00005 ABC transporter CpN1_RS08370 PF02567 Phenazine biosynthesis-like protein CpN1_RS08380 PF01467 Cytidylyltransferase-like CpN1_RS08390 PF00364 Biotin-requiring enzyme CpN1_RS08395 PF00271 Helicase conserved C-terminal domain CpN1_RS08395 PF17191 RecG wedge domain CpN1_RS08395 PF00270 DEAD/DEAH box helicase CpN1_RS08400 PF13684 Dihydroxyacetone kinase family CpN1_RS08400 PF02734 DAK2 domain CpN1_RS08405 PF03167 Uracil DNA glycosylase superfamily CpN1_RS08410 PF00586 AIR synthase related protein, N-terminal domain CpN1_RS08410 PF02769 AIR synthase related protein, C-terminal domain CpN1_RS08420 PF01820 D-ala D-ala ligase N-terminus CpN1_RS08420 PF07478 D-ala D-ala ligase C-terminus CpN1_RS08425 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CpN1_RS08425 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CpN1_RS08435 PF00694 Aconitase C-terminal domain CpN1_RS08440 PF00330 Aconitase family (aconitate hydratase) CpN1_RS08455 PF04055 Radical SAM superfamily CpN1_RS08455 PF06968 Biotin and Thiamin Synthesis associated domain CpN1_RS08465 PF01083 Cutinase CpN1_RS08480 PF10503 Esterase PHB depolymerase CpN1_RS08485 PF00749 tRNA synthetases class I (E and Q), catalytic domain CpN1_RS08490 PF00425 chorismate binding enzyme CpN1_RS08495 PF01557 Fumarylacetoacetate (FAA) hydrolase family CpN1_RS08515 PF00180 Isocitrate/isopropylmalate dehydrogenase CpN1_RS08520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CpN1_RS08520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CpN1_RS08520 PF01842 ACT domain CpN1_RS08535 PF01545 Cation efflux family CpN1_RS08540 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CpN1_RS08540 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CpN1_RS08545 PF01842 ACT domain CpN1_RS08545 PF10369 Small subunit of acetolactate synthase CpN1_RS08555 PF00924 Mechanosensitive ion channel CpN1_RS08565 PF00920 Dehydratase family CpN1_RS08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CpN1_RS08580 PF03466 LysR substrate binding domain CpN1_RS08585 PF01810 LysE type translocator CpN1_RS08590 PF00248 Aldo/keto reductase family CpN1_RS08595 PF02637 GatB domain CpN1_RS08595 PF02934 GatB/GatE catalytic domain CpN1_RS08600 PF00365 Phosphofructokinase CpN1_RS08610 PF00005 ABC transporter CpN1_RS08615 PF01032 FecCD transport family CpN1_RS08625 PF07690 Major Facilitator Superfamily CpN1_RS08635 PF01425 Amidase CpN1_RS08640 PF02686 Glu-tRNAGln amidotransferase C subunit CpN1_RS08650 PF01653 NAD-dependent DNA ligase adenylation domain CpN1_RS08650 PF12826 Helix-hairpin-helix motif CpN1_RS08650 PF00533 BRCA1 C Terminus (BRCT) domain CpN1_RS08650 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CpN1_RS08650 PF03120 NAD-dependent DNA ligase OB-fold domain CpN1_RS08675 PF00266 Aminotransferase class-V CpN1_RS08680 PF00766 Electron transfer flavoprotein FAD-binding domain CpN1_RS08680 PF01012 Electron transfer flavoprotein domain CpN1_RS08685 PF01012 Electron transfer flavoprotein domain CpN1_RS08690 PF18096 THUMP domain-like CpN1_RS08700 PF00005 ABC transporter CpN1_RS08705 PF11896 Domain of unknown function (DUF3416) CpN1_RS08710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CpN1_RS08710 PF00128 Alpha amylase, catalytic domain CpN1_RS08710 PF02806 Alpha amylase, C-terminal all-beta domain CpN1_RS08715 PF00085 Thioredoxin CpN1_RS08720 PF01910 Thiamine-binding protein CpN1_RS08730 PF01939 Endonuclease NucS CpN1_RS08740 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CpN1_RS08745 PF02874 ATP synthase alpha/beta family, beta-barrel domain CpN1_RS08745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CpN1_RS08750 PF00231 ATP synthase CpN1_RS08755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CpN1_RS08755 PF02874 ATP synthase alpha/beta family, beta-barrel domain CpN1_RS08755 PF00306 ATP synthase alpha/beta chain, C terminal domain CpN1_RS08760 PF00213 ATP synthase delta (OSCP) subunit CpN1_RS08765 PF00430 ATP synthase B/B' CF(0) CpN1_RS08770 PF00137 ATP synthase subunit C CpN1_RS08775 PF00119 ATP synthase A chain CpN1_RS08785 PF00953 Glycosyl transferase family 4 CpN1_RS08790 PF01300 Telomere recombination CpN1_RS08795 PF05175 Methyltransferase small domain CpN1_RS08795 PF17827 PrmC N-terminal domain CpN1_RS08800 PF00472 RF-1 domain CpN1_RS08800 PF03462 PCRF domain CpN1_RS08805 PF07498 Rho termination factor, N-terminal domain CpN1_RS08805 PF07497 Rho termination factor, RNA-binding domain CpN1_RS08805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CpN1_RS08805 PF07498 Rho termination factor, N-terminal domain CpN1_RS08805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CpN1_RS08805 PF07497 Rho termination factor, RNA-binding domain CpN1_RS08810 PF13193 AMP-binding enzyme C-terminal domain CpN1_RS08810 PF00501 AMP-binding enzyme CpN1_RS08820 PF00288 GHMP kinases N terminal domain CpN1_RS08825 PF03447 Homoserine dehydrogenase, NAD binding domain CpN1_RS08825 PF01842 ACT domain CpN1_RS08825 PF00742 Homoserine dehydrogenase CpN1_RS08830 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CpN1_RS08830 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CpN1_RS08835 PF05746 DALR anticodon binding domain CpN1_RS08835 PF03485 Arginyl tRNA synthetase N terminal domain CpN1_RS08835 PF00750 tRNA synthetases class I (R) CpN1_RS08840 PF02652 L-lactate permease CpN1_RS08845 PF02754 Cysteine-rich domain CpN1_RS08850 PF02589 LUD domain CpN1_RS08850 PF11870 Domain of unknown function (DUF3390) CpN1_RS08850 PF13183 4Fe-4S dicluster domain CpN1_RS08855 PF02589 LUD domain CpN1_RS08895 PF13175 AAA ATPase domain CpN1_RS08910 PF12419 SNF2 Helicase protein CpN1_RS08910 PF00271 Helicase conserved C-terminal domain CpN1_RS08910 PF00176 SNF2 family N-terminal domain CpN1_RS08915 PF00474 Sodium:solute symporter family CpN1_RS08940 PF00270 DEAD/DEAH box helicase CpN1_RS08940 PF03880 DbpA RNA binding domain CpN1_RS08940 PF00271 Helicase conserved C-terminal domain CpN1_RS08945 PF10509 Galactokinase galactose-binding signature CpN1_RS08945 PF08544 GHMP kinases C terminal CpN1_RS08945 PF00288 GHMP kinases N terminal domain CpN1_RS08950 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CpN1_RS08950 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CpN1_RS08965 PF01263 Aldose 1-epimerase CpN1_RS08980 PF00135 Carboxylesterase family CpN1_RS08985 PF08501 Shikimate dehydrogenase substrate binding domain CpN1_RS08995 PF00005 ABC transporter CpN1_RS08995 PF00664 ABC transporter transmembrane region CpN1_RS09000 PF16078 2-oxoglutarate dehydrogenase N-terminus CpN1_RS09000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CpN1_RS09000 PF16870 2-oxoglutarate dehydrogenase C-terminal CpN1_RS09000 PF02779 Transketolase, pyrimidine binding domain CpN1_RS09000 PF00676 Dehydrogenase E1 component CpN1_RS09010 PF03448 MgtE intracellular N domain CpN1_RS09010 PF01769 Divalent cation transporter CpN1_RS09010 PF00571 CBS domain CpN1_RS09020 PF10609 NUBPL iron-transfer P-loop NTPase CpN1_RS09020 PF01883 Iron-sulfur cluster assembly protein CpN1_RS09035 PF04542 Sigma-70 region 2 CpN1_RS09035 PF08281 Sigma-70, region 4 CpN1_RS09040 PF01596 O-methyltransferase CpN1_RS09045 PF00483 Nucleotidyl transferase CpN1_RS09050 PF13439 Glycosyltransferase Family 4 CpN1_RS09050 PF00534 Glycosyl transferases group 1 CpN1_RS09075 PF00535 Glycosyl transferase family 2 CpN1_RS09080 PF00809 Pterin binding enzyme CpN1_RS09085 PF03641 Possible lysine decarboxylase CpN1_RS09090 PF07687 Peptidase dimerisation domain CpN1_RS09090 PF01546 Peptidase family M20/M25/M40 CpN1_RS09095 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CpN1_RS09095 PF14602 Hexapeptide repeat of succinyl-transferase CpN1_RS09100 PF00324 Amino acid permease CpN1_RS09105 PF14602 Hexapeptide repeat of succinyl-transferase CpN1_RS09105 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CpN1_RS09110 PF00324 Amino acid permease CpN1_RS09125 PF00155 Aminotransferase class I and II CpN1_RS09130 PF00037 4Fe-4S binding domain CpN1_RS09140 PF02585 GlcNAc-PI de-N-acetylase CpN1_RS09145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CpN1_RS09150 PF14492 Elongation Factor G, domain II CpN1_RS09150 PF00009 Elongation factor Tu GTP binding domain CpN1_RS09150 PF00679 Elongation factor G C-terminus CpN1_RS09150 PF03144 Elongation factor Tu domain 2 CpN1_RS09165 PF03960 ArsC family CpN1_RS09170 PF00089 Trypsin CpN1_RS09175 PF00005 ABC transporter CpN1_RS09175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CpN1_RS09180 PF12911 N-terminal TM domain of oligopeptide transport permease C CpN1_RS09180 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS09185 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS09190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CpN1_RS09200 PF02224 Cytidylate kinase CpN1_RS09210 PF00005 ABC transporter CpN1_RS09215 PF09819 ABC-type cobalt transport system, permease component CpN1_RS09225 PF05661 Protein of unknown function (DUF808) CpN1_RS09230 PF17755 UvrA DNA-binding domain CpN1_RS09230 PF17760 UvrA interaction domain CpN1_RS09230 PF00005 ABC transporter CpN1_RS09235 PF00005 ABC transporter CpN1_RS09235 PF00664 ABC transporter transmembrane region CpN1_RS09240 PF00005 ABC transporter CpN1_RS09240 PF00664 ABC transporter transmembrane region CpN1_RS09245 PF08274 PhnA Zinc-Ribbon CpN1_RS09245 PF03831 PhnA domain CpN1_RS09260 PF06071 Protein of unknown function (DUF933) CpN1_RS09260 PF01926 50S ribosome-binding GTPase CpN1_RS09265 PF01594 AI-2E family transporter CpN1_RS09275 PF02401 LytB protein CpN1_RS09280 PF02601 Exonuclease VII, large subunit CpN1_RS09280 PF13742 OB-fold nucleic acid binding domain CpN1_RS09285 PF02609 Exonuclease VII small subunit CpN1_RS09295 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CpN1_RS09300 PF10415 Fumarase C C-terminus CpN1_RS09300 PF00206 Lyase CpN1_RS09310 PF07690 Major Facilitator Superfamily CpN1_RS09340 PF07690 Major Facilitator Superfamily CpN1_RS09345 PF00464 Serine hydroxymethyltransferase CpN1_RS09350 PF00485 Phosphoribulokinase / Uridine kinase family CpN1_RS09360 PF01255 Putative undecaprenyl diphosphate synthase CpN1_RS09370 PF02585 GlcNAc-PI de-N-acetylase CpN1_RS09380 PF01272 Transcription elongation factor, GreA/GreB, C-term CpN1_RS09380 PF03449 Transcription elongation factor, N-terminal CpN1_RS09395 PF12833 Helix-turn-helix domain CpN1_RS09405 PF02541 Ppx/GppA phosphatase family CpN1_RS09420 PF03952 Enolase, N-terminal domain CpN1_RS09420 PF00113 Enolase, C-terminal TIM barrel domain CpN1_RS09430 PF03819 MazG nucleotide pyrophosphohydrolase domain CpN1_RS09435 PF13520 Amino acid permease CpN1_RS09440 PF00271 Helicase conserved C-terminal domain CpN1_RS09440 PF00270 DEAD/DEAH box helicase CpN1_RS09440 PF02559 CarD-like/TRCF domain CpN1_RS09440 PF17757 UvrB interaction domain CpN1_RS09440 PF03461 TRCF domain CpN1_RS09445 PF16295 Tetracyclin repressor-like, C-terminal domain CpN1_RS09445 PF00440 Bacterial regulatory proteins, tetR family CpN1_RS09460 PF07732 Multicopper oxidase CpN1_RS09460 PF07731 Multicopper oxidase CpN1_RS09460 PF00394 Multicopper oxidase CpN1_RS09465 PF00132 Bacterial transferase hexapeptide (six repeats) CpN1_RS09465 PF12804 MobA-like NTP transferase domain CpN1_RS09470 PF14572 Phosphoribosyl synthetase-associated domain CpN1_RS09470 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CpN1_RS09475 PF17999 Pullulanase N1-terminal domain CpN1_RS09475 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CpN1_RS09475 PF00128 Alpha amylase, catalytic domain CpN1_RS09480 PF14693 Ribosomal protein TL5, C-terminal domain CpN1_RS09480 PF01386 Ribosomal L25p family CpN1_RS09485 PF01195 Peptidyl-tRNA hydrolase CpN1_RS09500 PF01195 Peptidyl-tRNA hydrolase CpN1_RS09505 PF00106 short chain dehydrogenase CpN1_RS09510 PF03144 Elongation factor Tu domain 2 CpN1_RS09510 PF00009 Elongation factor Tu GTP binding domain CpN1_RS09510 PF16658 Class II release factor RF3, C-terminal domain CpN1_RS09515 PF00561 alpha/beta hydrolase fold CpN1_RS09525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CpN1_RS09525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CpN1_RS09535 PF00378 Enoyl-CoA hydratase/isomerase CpN1_RS09550 PF03976 Polyphosphate kinase 2 (PPK2) CpN1_RS09565 PF12848 ABC transporter CpN1_RS09565 PF00005 ABC transporter CpN1_RS09565 PF16326 ABC transporter C-terminal domain CpN1_RS09570 PF08544 GHMP kinases C terminal CpN1_RS09570 PF00288 GHMP kinases N terminal domain CpN1_RS09575 PF00398 Ribosomal RNA adenine dimethylase CpN1_RS09580 PF06737 Transglycosylase-like domain CpN1_RS09580 PF07501 G5 domain CpN1_RS09580 PF03990 G5-linked-Ubiquitin-like domain CpN1_RS09585 PF01026 TatD related DNase CpN1_RS09590 PF09334 tRNA synthetases class I (M) CpN1_RS09590 PF08264 Anticodon-binding domain of tRNA CpN1_RS09595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpN1_RS09605 PF02028 BCCT, betaine/carnitine/choline family transporter CpN1_RS09610 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase CpN1_RS09610 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CpN1_RS09620 PF07681 DoxX CpN1_RS09635 PF03453 MoeA N-terminal region (domain I and II) CpN1_RS09635 PF03454 MoeA C-terminal region (domain IV) CpN1_RS09635 PF00994 Probable molybdopterin binding domain CpN1_RS09640 PF00483 Nucleotidyl transferase CpN1_RS09655 PF01741 Large-conductance mechanosensitive channel, MscL CpN1_RS09660 PF01967 MoaC family CpN1_RS09660 PF00994 Probable molybdopterin binding domain CpN1_RS09665 PF13180 PDZ domain CpN1_RS09670 PF00672 HAMP domain CpN1_RS09670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpN1_RS09670 PF00512 His Kinase A (phospho-acceptor) domain CpN1_RS09675 PF00072 Response regulator receiver domain CpN1_RS09675 PF00486 Transcriptional regulatory protein, C terminal CpN1_RS09680 PF01783 Ribosomal L32p protein family CpN1_RS09685 PF01197 Ribosomal protein L31 CpN1_RS09690 PF00830 Ribosomal L28 family CpN1_RS09695 PF00471 Ribosomal protein L33 CpN1_RS09700 PF00253 Ribosomal protein S14p/S29e CpN1_RS09705 PF01084 Ribosomal protein S18 CpN1_RS09715 PF00440 Bacterial regulatory proteins, tetR family CpN1_RS09725 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS09730 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS09735 PF00497 Bacterial extracellular solute-binding proteins, family 3 CpN1_RS09740 PF00005 ABC transporter CpN1_RS09745 PF02142 MGS-like domain CpN1_RS09745 PF01808 AICARFT/IMPCHase bienzyme CpN1_RS09750 PF00551 Formyl transferase CpN1_RS09760 PF01551 Peptidase family M23 CpN1_RS09765 PF00580 UvrD/REP helicase N-terminal domain CpN1_RS09765 PF13361 UvrD-like helicase C-terminal domain CpN1_RS09770 PF01817 Chorismate mutase type II CpN1_RS09775 PF00171 Aldehyde dehydrogenase family CpN1_RS09780 PF00342 Phosphoglucose isomerase CpN1_RS09790 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CpN1_RS09790 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CpN1_RS09800 PF00270 DEAD/DEAH box helicase CpN1_RS09800 PF08494 DEAD/H associated CpN1_RS09800 PF00271 Helicase conserved C-terminal domain CpN1_RS09805 PF00459 Inositol monophosphatase family CpN1_RS09810 PF00303 Thymidylate synthase CpN1_RS09815 PF00186 Dihydrofolate reductase CpN1_RS09820 PF00462 Glutaredoxin CpN1_RS09825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CpN1_RS09840 PF09383 NIL domain CpN1_RS09840 PF00005 ABC transporter CpN1_RS09845 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS09845 PF12911 N-terminal TM domain of oligopeptide transport permease C CpN1_RS09850 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS09855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CpN1_RS09860 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CpN1_RS09870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CpN1_RS09875 PF00291 Pyridoxal-phosphate dependent enzyme CpN1_RS09880 PF01554 MatE CpN1_RS09890 PF00999 Sodium/hydrogen exchanger family CpN1_RS09890 PF02254 TrkA-N domain CpN1_RS09895 PF08924 Domain of unknown function (DUF1906) CpN1_RS09905 PF00474 Sodium:solute symporter family CpN1_RS09915 PF00378 Enoyl-CoA hydratase/isomerase CpN1_RS09920 PF00248 Aldo/keto reductase family CpN1_RS09925 PF00080 Copper/zinc superoxide dismutase (SODC) CpN1_RS09930 PF01039 Carboxyl transferase domain CpN1_RS09935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CpN1_RS09940 PF00285 Citrate synthase, C-terminal domain CpN1_RS09945 PF00266 Aminotransferase class-V CpN1_RS09950 PF11268 Protein of unknown function (DUF3071) CpN1_RS09960 PF00588 SpoU rRNA Methylase family CpN1_RS09965 PF00860 Permease family CpN1_RS09970 PF11228 Protein of unknown function (DUF3027) CpN1_RS09985 PF00313 'Cold-shock' DNA-binding domain CpN1_RS09990 PF06737 Transglycosylase-like domain CpN1_RS09990 PF11574 Protein of unknown function (DUF3235) CpN1_RS10005 PF04851 Type III restriction enzyme, res subunit CpN1_RS10005 PF00271 Helicase conserved C-terminal domain CpN1_RS10015 PF00155 Aminotransferase class I and II CpN1_RS10045 PF00005 ABC transporter CpN1_RS10060 PF04012 PspA/IM30 family CpN1_RS10065 PF00085 Thioredoxin CpN1_RS10075 PF00403 Heavy-metal-associated domain CpN1_RS10080 PF07690 Major Facilitator Superfamily CpN1_RS10085 PF00772 DnaB-like helicase N terminal domain CpN1_RS10085 PF03796 DnaB-like helicase C terminal domain CpN1_RS10090 PF00723 Glycosyl hydrolases family 15 CpN1_RS10095 PF01281 Ribosomal protein L9, N-terminal domain CpN1_RS10095 PF03948 Ribosomal protein L9, C-terminal domain CpN1_RS10100 PF00436 Single-strand binding protein family CpN1_RS10105 PF01250 Ribosomal protein S6 CpN1_RS10120 PF00905 Penicillin binding protein transpeptidase domain CpN1_RS10120 PF00912 Transglycosylase CpN1_RS10135 PF00582 Universal stress protein family CpN1_RS10150 PF17773 UPF0176 acylphosphatase like domain CpN1_RS10150 PF12368 Rhodanase C-terminal CpN1_RS10155 PF09335 SNARE associated Golgi protein CpN1_RS10160 PF00210 Ferritin-like domain CpN1_RS10165 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CpN1_RS10165 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CpN1_RS10170 PF01256 Carbohydrate kinase CpN1_RS10170 PF03853 YjeF-related protein N-terminus CpN1_RS10175 PF04892 VanZ like family CpN1_RS10185 PF09334 tRNA synthetases class I (M) CpN1_RS10185 PF13603 Leucyl-tRNA synthetase, Domain 2 CpN1_RS10185 PF08264 Anticodon-binding domain of tRNA CpN1_RS10190 PF00005 ABC transporter CpN1_RS10190 PF02687 FtsX-like permease family CpN1_RS10190 PF12704 MacB-like periplasmic core domain CpN1_RS10195 PF02687 FtsX-like permease family CpN1_RS10210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CpN1_RS10210 PF07730 Histidine kinase CpN1_RS10215 PF00196 Bacterial regulatory proteins, luxR family CpN1_RS10215 PF00072 Response regulator receiver domain CpN1_RS10225 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CpN1_RS10230 PF01979 Amidohydrolase family CpN1_RS10235 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CpN1_RS10240 PF00480 ROK family CpN1_RS10245 PF07729 FCD domain CpN1_RS10245 PF00392 Bacterial regulatory proteins, gntR family CpN1_RS10250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CpN1_RS10255 PF00528 Binding-protein-dependent transport system inner membrane component CpN1_RS10260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CpN1_RS10260 PF00005 ABC transporter CpN1_RS10265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CpN1_RS10265 PF00005 ABC transporter CpN1_RS10270 PF00701 Dihydrodipicolinate synthetase family CpN1_RS10305 PF08903 Domain of unknown function (DUF1846) CpN1_RS10310 PF07411 Domain of unknown function (DUF1508) CpN1_RS10325 PF00375 Sodium:dicarboxylate symporter family CpN1_RS10335 PF01593 Flavin containing amine oxidoreductase CpN1_RS10345 PF00425 chorismate binding enzyme CpN1_RS10345 PF04715 Anthranilate synthase component I, N terminal region CpN1_RS10350 PF00117 Glutamine amidotransferase class-I CpN1_RS10355 PF02885 Glycosyl transferase family, helical bundle domain CpN1_RS10355 PF00591 Glycosyl transferase family, a/b domain CpN1_RS10360 PF00218 Indole-3-glycerol phosphate synthase CpN1_RS10360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CpN1_RS10370 PF00291 Pyridoxal-phosphate dependent enzyme CpN1_RS10375 PF00290 Tryptophan synthase alpha chain CpN1_RS10385 PF13593 SBF-like CPA transporter family (DUF4137) CpN1_RS10395 PF05437 Branched-chain amino acid transport protein (AzlD) CpN1_RS10400 PF03591 AzlC protein CpN1_RS10405 PF02622 Uncharacterized ACR, COG1678 CpN1_RS10410 PF13735 tRNA nucleotidyltransferase domain 2 putative CpN1_RS10410 PF12627 Probable RNA and SrmB- binding site of polymerase A CpN1_RS10410 PF01743 Poly A polymerase head domain CpN1_RS10415 PF00293 NUDIX domain CpN1_RS10425 PF03023 Lipid II flippase MurJ CpN1_RS10430 PF08281 Sigma-70, region 4 CpN1_RS10430 PF04542 Sigma-70 region 2 CpN1_RS10435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CpN1_RS10440 PF00085 Thioredoxin CpN1_RS10445 PF01471 Putative peptidoglycan binding domain CpN1_RS10445 PF01520 N-acetylmuramoyl-L-alanine amidase CpN1_RS10455 PF02195 ParB-like nuclease domain CpN1_RS10455 PF17762 HTH domain found in ParB protein CpN1_RS10460 PF13614 AAA domain CpN1_RS10465 PF02527 rRNA small subunit methyltransferase G CpN1_RS10470 PF02096 60Kd inner membrane protein CpN1_RS10475 PF01809 Putative membrane protein insertion efficiency factor CpN1_RS10480 PF00825 Ribonuclease P CpN1_RS10485 PF00468 Ribosomal protein L34