CpPa04_RS00005 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CpPa04_RS00010 SM00480 DNA polymerase III beta subunit CpPa04_RS00025 SM00387 Histidine kinase-like ATPases CpPa04_RS00025 SM00433 TopoisomeraseII CpPa04_RS00045 SM00434 DNA Topoisomerase IV CpPa04_RS00095 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS00135 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS00160 SM00220 Serine/Threonine protein kinases, catalytic domain CpPa04_RS00160 SM00740 CpPa04_RS00160 CpPa04_RS00165 SM00220 Serine/Threonine protein kinases, catalytic domain CpPa04_RS00180 SM00331 Sigma factor PP2C-like phosphatases CpPa04_RS00180 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CpPa04_RS00185 SM00240 Forkhead associated domain CpPa04_RS00190 SM00240 Forkhead associated domain CpPa04_RS00220 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS00230 SM00924 MgtE intracellular N domain CpPa04_RS00235 SM00642 Alpha-amylase domain CpPa04_RS00290 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS00305 SM00729 Elongator protein 3, MiaB family, Radical SAM CpPa04_RS00305 SM00876 Biotin and Thiamin Synthesis associated domain CpPa04_RS00330 SM00641 Glycosyl hydrolases family 25 CpPa04_RS00380 SM00347 helix_turn_helix multiple antibiotic resistance protein CpPa04_RS00420 SM00487 DEAD-like helicases superfamily CpPa04_RS00420 SM00490 helicase superfamily c-terminal domain CpPa04_RS00420 SM00847 Helicase associated domain (HA2) Add an annotation CpPa04_RS00435 SM00822 CpPa04_RS00435 CpPa04_RS00465 SM00507 HNH nucleases CpPa04_RS00560 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS00580 SM00014 Acid phosphatase homologues CpPa04_RS00585 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS00600 SM00829 Enoylreductase CpPa04_RS00635 SM01061 CAT RNA binding domain CpPa04_RS00670 SM00345 helix_turn_helix gluconate operon transcriptional repressor CpPa04_RS00730 SM00829 Enoylreductase CpPa04_RS00760 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS00770 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CpPa04_RS00770 SM00493 CpPa04_RS00770 CpPa04_RS00790 SM00345 helix_turn_helix gluconate operon transcriptional repressor CpPa04_RS00790 SM00895 CpPa04_RS00790 CpPa04_RS00825 SM00917 LeuA allosteric (dimerisation) domain CpPa04_RS00845 SM01133 CpPa04_RS00845 CpPa04_RS00890 SM00859 Semialdehyde dehydrogenase, NAD binding domain CpPa04_RS00900 SM01060 CpPa04_RS00900 CpPa04_RS00930 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS00950 SM00448 cheY-homologous receiver domain CpPa04_RS00950 SM00862 Transcriptional regulatory protein, C terminal CpPa04_RS01005 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS01050 SM00849 Metallo-beta-lactamase superfamily CpPa04_RS01055 SM00100 Cyclic nucleotide-monophosphate binding domain CpPa04_RS01055 SM00419 helix_turn_helix, cAMP Regulatory protein CpPa04_RS01065 SM00478 endonuclease III CpPa04_RS01065 SM00525 CpPa04_RS01065 CpPa04_RS01145 SM00487 DEAD-like helicases superfamily CpPa04_RS01145 SM00490 helicase superfamily c-terminal domain CpPa04_RS01150 SM00357 Cold shock protein domain CpPa04_RS01155 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CpPa04_RS01155 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CpPa04_RS01155 SM00493 CpPa04_RS01155 CpPa04_RS01165 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CpPa04_RS01165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CpPa04_RS01235 SM00530 Helix-turn-helix XRE-family like proteins CpPa04_RS01320 SM00855 Phosphoglycerate mutase family CpPa04_RS01325 SM00387 Histidine kinase-like ATPases CpPa04_RS01325 SM00388 His Kinase A (phosphoacceptor) domain CpPa04_RS01330 SM00448 cheY-homologous receiver domain CpPa04_RS01330 SM00862 Transcriptional regulatory protein, C terminal CpPa04_RS01365 SM01155 CpPa04_RS01365 CpPa04_RS01405 SM01004 Delta-aminolevulinic acid dehydratase CpPa04_RS01440 SM00855 Phosphoglycerate mutase family CpPa04_RS01465 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS01515 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CpPa04_RS01580 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CpPa04_RS01585 SM00649 Ribosomal protein L11/L12 CpPa04_RS01635 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS01660 SM00663 RNA polymerase I subunit A N-terminus CpPa04_RS01670 SM00421 helix_turn_helix, Lux Regulon CpPa04_RS01670 SM00448 cheY-homologous receiver domain CpPa04_RS01680 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS01725 SM00838 Elongation factor G C-terminus CpPa04_RS01725 SM00889 Elongation factor G, domain IV CpPa04_RS01775 SM01403 CpPa04_RS01775 CpPa04_RS01795 SM01382 CpPa04_RS01795 CpPa04_RS01795 SM01383 CpPa04_RS01795 CpPa04_RS01810 SM00322 K homology RNA-binding domain CpPa04_RS01835 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS01850 SM01374 CpPa04_RS01850 CpPa04_RS01875 SM00870 CpPa04_RS01875 CpPa04_RS01880 SM00014 Acid phosphatase homologues CpPa04_RS01955 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS01990 SM00316 Ribosomal protein S1-like RNA-binding domain CpPa04_RS02005 SM00363 S4 RNA-binding domain CpPa04_RS02005 SM01390 CpPa04_RS02005 CpPa04_RS02010 SM00662 RNA polymerases D CpPa04_RS02105 SM01005 Alanine racemase, C-terminal domain CpPa04_RS02140 SM00883 Chaperonin 10 Kd subunit CpPa04_RS02170 SM00116 Domain in cystathionine beta-synthase and other proteins. CpPa04_RS02170 SM01240 CpPa04_RS02170 CpPa04_RS02175 SM01240 CpPa04_RS02175 CpPa04_RS02205 SM00421 helix_turn_helix, Lux Regulon CpPa04_RS02205 SM00448 cheY-homologous receiver domain CpPa04_RS02225 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS02260 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS02275 SM00529 Helix-turn-helix diphteria tox regulatory element CpPa04_RS02275 SM00899 CpPa04_RS02275 CpPa04_RS02295 SM00507 HNH nucleases CpPa04_RS02325 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS02350 SM00422 helix_turn_helix, mercury resistance CpPa04_RS02405 SM00530 Helix-turn-helix XRE-family like proteins CpPa04_RS02425 SM00878 Biotin carboxylase C-terminal domain CpPa04_RS02440 SM00878 Biotin carboxylase C-terminal domain CpPa04_RS02445 SM00450 Rhodanese Homology Domain CpPa04_RS02475 SM00354 helix_turn _helix lactose operon repressor CpPa04_RS02510 SM01001 AIR carboxylase CpPa04_RS02605 SM00996 S-adenosyl-L-homocysteine hydrolase CpPa04_RS02605 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CpPa04_RS02615 SM00448 cheY-homologous receiver domain CpPa04_RS02615 SM00862 Transcriptional regulatory protein, C terminal CpPa04_RS02620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CpPa04_RS02620 SM00387 Histidine kinase-like ATPases CpPa04_RS02620 SM00388 His Kinase A (phosphoacceptor) domain CpPa04_RS02625 SM00909 Sporulation and spore germination CpPa04_RS02640 SM00957 SecA DEAD-like domain CpPa04_RS02640 SM00958 SecA preprotein cross-linking domain CpPa04_RS02720 SM00487 DEAD-like helicases superfamily CpPa04_RS02720 SM00490 helicase superfamily c-terminal domain CpPa04_RS02760 SM00341 Helicase and RNase D C-terminal CpPa04_RS02780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CpPa04_RS02860 SM00823 Phosphopantetheine attachment site CpPa04_RS02915 SM00937 CpPa04_RS02915 CpPa04_RS02935 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS02955 SM00947 Carbonic anhydrase CpPa04_RS02980 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS03015 SM00487 DEAD-like helicases superfamily CpPa04_RS03015 SM00490 helicase superfamily c-terminal domain CpPa04_RS03035 SM00357 Cold shock protein domain CpPa04_RS03180 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS03230 SM00487 DEAD-like helicases superfamily CpPa04_RS03230 SM00490 helicase superfamily c-terminal domain CpPa04_RS03240 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CpPa04_RS03240 SM01232 CpPa04_RS03240 CpPa04_RS03260 SM00830 Chorismate mutase type II CpPa04_RS03285 SM00798 AICARFT/IMPCHase bienzyme CpPa04_RS03285 SM00851 MGS-like domain CpPa04_RS03290 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS03295 SM00062 Bacterial periplasmic substrate-binding proteins CpPa04_RS03355 SM00448 cheY-homologous receiver domain CpPa04_RS03355 SM00862 Transcriptional regulatory protein, C terminal CpPa04_RS03360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CpPa04_RS03360 SM00387 Histidine kinase-like ATPases CpPa04_RS03360 SM00388 His Kinase A (phosphoacceptor) domain CpPa04_RS03365 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CpPa04_RS03370 SM00852 Probable molybdopterin binding domain CpPa04_RS03400 SM00852 Probable molybdopterin binding domain CpPa04_RS03460 SM01208 CpPa04_RS03460 CpPa04_RS03465 SM00650 Ribosomal RNA adenine dimethylases CpPa04_RS03475 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS03520 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CpPa04_RS03540 SM00822 CpPa04_RS03540 CpPa04_RS03570 SM00642 Alpha-amylase domain CpPa04_RS03575 SM01400 CpPa04_RS03575 CpPa04_RS03605 SM00487 DEAD-like helicases superfamily CpPa04_RS03605 SM00490 helicase superfamily c-terminal domain CpPa04_RS03605 SM00982 CpPa04_RS03605 CpPa04_RS03605 SM01058 CarD-like/TRCF domain CpPa04_RS03625 SM01192 CpPa04_RS03625 CpPa04_RS03625 SM01193 CpPa04_RS03625 CpPa04_RS03655 SM00342 helix_turn_helix, arabinose operon control protein CpPa04_RS03810 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS03815 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS03820 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS03840 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS03875 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS03880 SM00020 Trypsin-like serine protease CpPa04_RS03995 SM00640 Glycosyl hydrolases family 32 CpPa04_RS04045 SM00924 MgtE intracellular N domain CpPa04_RS04055 SM00861 Transketolase, pyrimidine binding domain CpPa04_RS04060 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS04120 SM00487 DEAD-like helicases superfamily CpPa04_RS04120 SM00490 helicase superfamily c-terminal domain CpPa04_RS04150 SM00487 DEAD-like helicases superfamily CpPa04_RS04150 SM00490 helicase superfamily c-terminal domain CpPa04_RS04170 SM00867 YceI-like domain CpPa04_RS04175 SM00347 helix_turn_helix multiple antibiotic resistance protein CpPa04_RS04190 SM00420 helix_turn_helix, Deoxyribose operon repressor CpPa04_RS04190 SM01134 CpPa04_RS04190 CpPa04_RS04225 SM00836 DALR anticodon binding domain CpPa04_RS04225 SM01016 Arginyl tRNA synthetase N terminal dom CpPa04_RS04255 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS04255 SM00959 Rho termination factor, N-terminal domain CpPa04_RS04260 SM00937 CpPa04_RS04260 CpPa04_RS04315 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS04355 SM00642 Alpha-amylase domain CpPa04_RS04360 SM00642 Alpha-amylase domain CpPa04_RS04365 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS04380 SM00893 Electron transfer flavoprotein domain CpPa04_RS04385 SM00893 Electron transfer flavoprotein domain CpPa04_RS04410 SM00479 CpPa04_RS04410 CpPa04_RS04415 SM00292 breast cancer carboxy-terminal domain CpPa04_RS04415 SM00532 Ligase N family CpPa04_RS04455 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS04470 SM00845 GatB domain CpPa04_RS04550 SM01329 CpPa04_RS04550 CpPa04_RS04555 SM00100 Cyclic nucleotide-monophosphate binding domain CpPa04_RS04555 SM00116 Domain in cystathionine beta-synthase and other proteins. CpPa04_RS04560 SM00479 CpPa04_RS04560 CpPa04_RS04600 SM01110 CpPa04_RS04600 CpPa04_RS04610 SM00729 Elongator protein 3, MiaB family, Radical SAM CpPa04_RS04610 SM00876 Biotin and Thiamin Synthesis associated domain CpPa04_RS04615 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CpPa04_RS04620 SM00346 helix_turn_helix isocitrate lyase regulation CpPa04_RS04660 SM00986 Uracil DNA glycosylase superfamily CpPa04_RS04660 SM00987 UreE urease accessory protein, C-terminal domain CpPa04_RS04665 SM01120 CpPa04_RS04665 CpPa04_RS04665 SM01121 CpPa04_RS04665 CpPa04_RS04670 SM00487 DEAD-like helicases superfamily CpPa04_RS04670 SM00490 helicase superfamily c-terminal domain CpPa04_RS04700 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS04710 SM00062 Bacterial periplasmic substrate-binding proteins CpPa04_RS04725 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CpPa04_RS04725 SM00474 3'-5' exonuclease CpPa04_RS04725 SM00475 5'-3' exonuclease CpPa04_RS04725 SM00482 DNA polymerase A domain CpPa04_RS04735 SM00316 Ribosomal protein S1-like RNA-binding domain CpPa04_RS04755 SM00487 DEAD-like helicases superfamily CpPa04_RS04755 SM00490 helicase superfamily c-terminal domain CpPa04_RS04765 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS04775 SM00849 Metallo-beta-lactamase superfamily CpPa04_RS04805 SM00967 RNA 2'-O ribose methyltransferase substrate binding CpPa04_RS04815 SM00873 B3/4 domain CpPa04_RS04815 SM00874 tRNA synthetase B5 domain CpPa04_RS04815 SM00896 Ferredoxin-fold anticodon binding domain CpPa04_RS04820 SM00859 Semialdehyde dehydrogenase, NAD binding domain CpPa04_RS04865 SM00363 S4 RNA-binding domain CpPa04_RS04900 SM00363 S4 RNA-binding domain CpPa04_RS04970 SM00363 S4 RNA-binding domain CpPa04_RS05020 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS05070 SM00957 SecA DEAD-like domain CpPa04_RS05070 SM00958 SecA preprotein cross-linking domain CpPa04_RS05075 SM00240 Forkhead associated domain CpPa04_RS05080 SM00422 helix_turn_helix, mercury resistance CpPa04_RS05090 SM00422 helix_turn_helix, mercury resistance CpPa04_RS05095 SM00327 von Willebrand factor (vWF) type A domain CpPa04_RS05110 SM01091 Transporter associated domain CpPa04_RS05115 SM00487 DEAD-like helicases superfamily CpPa04_RS05115 SM00490 helicase superfamily c-terminal domain CpPa04_RS05120 SM01350 CpPa04_RS05120 CpPa04_RS05165 SM00867 YceI-like domain CpPa04_RS05240 SM00487 DEAD-like helicases superfamily CpPa04_RS05240 SM00490 helicase superfamily c-terminal domain CpPa04_RS05240 SM01142 CpPa04_RS05240 CpPa04_RS05280 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS05335 SM01018 B12 binding domain CpPa04_RS05390 SM01120 CpPa04_RS05390 CpPa04_RS05450 SM00244 prohibitin homologues CpPa04_RS05525 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS05570 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS05590 SM00861 Transketolase, pyrimidine binding domain CpPa04_RS05635 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CpPa04_RS05655 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CpPa04_RS05655 SM00465 GIY-YIG type nucleases (URI domain) CpPa04_RS05720 SM01409 CpPa04_RS05720 CpPa04_RS05725 SM00072 Guanylate kinase homologues. CpPa04_RS05735 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CpPa04_RS05740 SM00851 MGS-like domain CpPa04_RS05740 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CpPa04_RS05745 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CpPa04_RS05785 SM00841 Elongation factor P, C-terminal CpPa04_RS05785 SM01185 CpPa04_RS05785 CpPa04_RS05830 SM00732 Likely ribonuclease with RNase H fold. CpPa04_RS05835 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CpPa04_RS05840 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS05860 SM00487 DEAD-like helicases superfamily CpPa04_RS05860 SM00490 helicase superfamily c-terminal domain CpPa04_RS05910 SM00849 Metallo-beta-lactamase superfamily CpPa04_RS05930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CpPa04_RS05930 SM00954 Region found in RelA / SpoT proteins CpPa04_RS05955 SM01323 CpPa04_RS05955 CpPa04_RS05960 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS06025 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CpPa04_RS06100 SM00474 3'-5' exonuclease CpPa04_RS06105 SM00861 Transketolase, pyrimidine binding domain CpPa04_RS06160 SM00487 DEAD-like helicases superfamily CpPa04_RS06190 SM00529 Helix-turn-helix diphteria tox regulatory element CpPa04_RS06210 SM00487 DEAD-like helicases superfamily CpPa04_RS06210 SM00490 helicase superfamily c-terminal domain CpPa04_RS06235 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS06235 SM00487 DEAD-like helicases superfamily CpPa04_RS06235 SM00490 helicase superfamily c-terminal domain CpPa04_RS06235 SM00847 Helicase associated domain (HA2) Add an annotation CpPa04_RS06255 SM00420 helix_turn_helix, Deoxyribose operon repressor CpPa04_RS06255 SM01134 CpPa04_RS06255 CpPa04_RS06265 SM00420 helix_turn_helix, Deoxyribose operon repressor CpPa04_RS06265 SM01134 CpPa04_RS06265 CpPa04_RS06350 SM00729 Elongator protein 3, MiaB family, Radical SAM CpPa04_RS06360 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS06375 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS06390 SM00530 Helix-turn-helix XRE-family like proteins CpPa04_RS06415 SM00843 CpPa04_RS06415 CpPa04_RS06425 SM00849 Metallo-beta-lactamase superfamily CpPa04_RS06430 SM01130 CpPa04_RS06430 CpPa04_RS06445 SM00316 Ribosomal protein S1-like RNA-binding domain CpPa04_RS06445 SM00322 K homology RNA-binding domain CpPa04_RS06450 SM01387 CpPa04_RS06450 CpPa04_RS06460 SM00904 Riboflavin kinase CpPa04_RS06495 SM00173 Ras subfamily of RAS small GTPases CpPa04_RS06505 SM00322 K homology RNA-binding domain CpPa04_RS06540 SM00833 Cobalamin synthesis protein cobW C-terminal domain CpPa04_RS06560 SM00327 von Willebrand factor (vWF) type A domain CpPa04_RS06565 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS06610 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CpPa04_RS06680 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS06710 SM00316 Ribosomal protein S1-like RNA-binding domain CpPa04_RS06710 SM00732 Likely ribonuclease with RNase H fold. CpPa04_RS06745 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS06745 SM00962 SRP54-type protein, GTPase domain CpPa04_RS06745 SM00963 SRP54-type protein, helical bundle domain CpPa04_RS06750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CpPa04_RS06755 SM00938 Nitrogen regulatory protein P-II CpPa04_RS06760 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS06760 SM00962 SRP54-type protein, GTPase domain CpPa04_RS06760 SM00963 SRP54-type protein, helical bundle domain CpPa04_RS06785 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CpPa04_RS06785 SM01232 CpPa04_RS06785 CpPa04_RS06790 SM00358 Double-stranded RNA binding motif CpPa04_RS06790 SM00535 Ribonuclease III family CpPa04_RS06810 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CpPa04_RS06810 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CpPa04_RS06815 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CpPa04_RS06945 SM00642 Alpha-amylase domain CpPa04_RS06950 SM00479 CpPa04_RS06950 CpPa04_RS06960 SM00954 Region found in RelA / SpoT proteins CpPa04_RS06965 SM00363 S4 RNA-binding domain CpPa04_RS06985 SM00481 DNA polymerase alpha chain like domain CpPa04_RS07020 SM00870 CpPa04_RS07020 CpPa04_RS07065 SM00864 Tubulin/FtsZ family, GTPase domain CpPa04_RS07065 SM00865 Tubulin/FtsZ family, C-terminal domain CpPa04_RS07190 SM00563 Phosphate acyltransferases CpPa04_RS07320 SM00729 Elongator protein 3, MiaB family, Radical SAM CpPa04_RS07335 SM01230 CpPa04_RS07335 CpPa04_RS07445 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS07470 SM00116 Domain in cystathionine beta-synthase and other proteins. CpPa04_RS07470 SM01240 CpPa04_RS07470 CpPa04_RS07515 SM01230 CpPa04_RS07515 CpPa04_RS07525 SM00880 CpPa04_RS07525 CpPa04_RS07525 SM01118 CpPa04_RS07525 CpPa04_RS07540 SM00955 CpPa04_RS07540 CpPa04_RS07550 SM00855 Phosphoglycerate mutase family CpPa04_RS07575 SM00226 Low molecular weight phosphatase family CpPa04_RS07655 SM00400 zinc finger CpPa04_RS07655 SM00493 CpPa04_RS07655 CpPa04_RS07655 SM00766 DNA primase DnaG DnaB-binding CpPa04_RS07675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CpPa04_RS07710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CpPa04_RS07745 SM01091 Transporter associated domain CpPa04_RS07755 SM00322 K homology RNA-binding domain CpPa04_RS07765 SM00271 DnaJ molecular chaperone homology domain CpPa04_RS07775 SM00729 Elongator protein 3, MiaB family, Radical SAM CpPa04_RS07830 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS07845 SM00507 HNH nucleases CpPa04_RS07880 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS07925 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS07930 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS07940 SM00838 Elongation factor G C-terminus CpPa04_RS07960 SM00248 ankyrin repeats CpPa04_RS07985 SM00855 Phosphoglycerate mutase family CpPa04_RS08020 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CpPa04_RS08040 SM00316 Ribosomal protein S1-like RNA-binding domain CpPa04_RS08050 SM00562 CpPa04_RS08050 CpPa04_RS08085 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS08085 SM00994 ClpX C4-type zinc finger CpPa04_RS08085 SM01086 C-terminal, D2-small domain, of ClpB protein CpPa04_RS08175 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS08230 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS08260 SM00829 Enoylreductase CpPa04_RS08265 SM00822 CpPa04_RS08265 CpPa04_RS08270 SM00479 CpPa04_RS08270 CpPa04_RS08280 SM01130 CpPa04_RS08280 CpPa04_RS08295 SM00829 Enoylreductase CpPa04_RS08330 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CpPa04_RS08345 SM00421 helix_turn_helix, Lux Regulon CpPa04_RS08345 SM00448 cheY-homologous receiver domain CpPa04_RS08425 SM00487 DEAD-like helicases superfamily CpPa04_RS08425 SM00491 CpPa04_RS08425 CpPa04_RS08510 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CpPa04_RS08585 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS08620 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CpPa04_RS08620 SM00421 helix_turn_helix, Lux Regulon CpPa04_RS08685 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS08690 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS08715 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS08745 SM00046 Diacylglycerol kinase catalytic domain (presumed) CpPa04_RS08805 SM01211 CpPa04_RS08805 CpPa04_RS08835 SM00998 Adenylosuccinate lyase C-terminus CpPa04_RS08850 SM01209 CpPa04_RS08850 CpPa04_RS08850 SM01210 CpPa04_RS08850 CpPa04_RS08865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CpPa04_RS08865 SM00387 Histidine kinase-like ATPases CpPa04_RS08865 SM00388 His Kinase A (phosphoacceptor) domain CpPa04_RS08870 SM00448 cheY-homologous receiver domain CpPa04_RS08870 SM00862 Transcriptional regulatory protein, C terminal CpPa04_RS08945 SM00354 helix_turn _helix lactose operon repressor CpPa04_RS08955 SM00967 RNA 2'-O ribose methyltransferase substrate binding CpPa04_RS08960 SM00840 CpPa04_RS08960 CpPa04_RS08975 SM01058 CarD-like/TRCF domain CpPa04_RS08995 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS09005 SM00947 Carbonic anhydrase CpPa04_RS09010 SM00478 endonuclease III CpPa04_RS09010 SM00525 CpPa04_RS09010 CpPa04_RS09025 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS09025 SM01086 C-terminal, D2-small domain, of ClpB protein CpPa04_RS09060 SM00244 prohibitin homologues CpPa04_RS09115 SM00905 Dihydroneopterin aldolase CpPa04_RS09130 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS09155 SM00450 Rhodanese Homology Domain CpPa04_RS09175 SM00347 helix_turn_helix multiple antibiotic resistance protein CpPa04_RS09180 SM00823 Phosphopantetheine attachment site CpPa04_RS09295 SM00155 Phospholipase D. Active site motifs. CpPa04_RS09305 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS09320 SM00062 Bacterial periplasmic substrate-binding proteins CpPa04_RS09325 SM00220 Serine/Threonine protein kinases, catalytic domain CpPa04_RS09400 SM00028 Tetratricopeptide repeats CpPa04_RS09415 SM00788 Adenylosuccinate synthetase CpPa04_RS09445 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS09495 SM00450 Rhodanese Homology Domain CpPa04_RS09535 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS09535 SM01086 C-terminal, D2-small domain, of ClpB protein CpPa04_RS09540 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS09595 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS09620 SM00829 Enoylreductase CpPa04_RS09640 SM00422 helix_turn_helix, mercury resistance CpPa04_RS09645 SM00271 DnaJ molecular chaperone homology domain CpPa04_RS09680 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS09720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CpPa04_RS09725 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS09755 SM00988 UreE urease accessory protein, N-terminal domain CpPa04_RS09810 SM00984 UDP binding domain CpPa04_RS09920 SM00823 Phosphopantetheine attachment site CpPa04_RS09920 SM00824 Thioesterase CpPa04_RS09920 SM00825 Beta-ketoacyl synthase CpPa04_RS09920 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CpPa04_RS09930 SM01110 CpPa04_RS09930 CpPa04_RS09975 SM00014 Acid phosphatase homologues CpPa04_RS10000 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS10015 SM00644 CpPa04_RS10015 CpPa04_RS10015 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. CpPa04_RS10025 SM00563 Phosphate acyltransferases CpPa04_RS10035 SM00345 helix_turn_helix gluconate operon transcriptional repressor CpPa04_RS10035 SM00866 CpPa04_RS10035 CpPa04_RS10050 SM00855 Phosphoglycerate mutase family CpPa04_RS10110 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CpPa04_RS10185 SM00421 helix_turn_helix, Lux Regulon CpPa04_RS10185 SM00448 cheY-homologous receiver domain CpPa04_RS10190 SM00387 Histidine kinase-like ATPases CpPa04_RS10265 SM00345 helix_turn_helix gluconate operon transcriptional repressor CpPa04_RS10300 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS10355 SM00347 helix_turn_helix multiple antibiotic resistance protein CpPa04_RS10375 SM00450 Rhodanese Homology Domain CpPa04_RS10390 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CpPa04_RS10390 SM01232 CpPa04_RS10390 CpPa04_RS10415 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS10440 SM00421 helix_turn_helix, Lux Regulon CpPa04_RS10440 SM00448 cheY-homologous receiver domain CpPa04_RS10470 SM00345 helix_turn_helix gluconate operon transcriptional repressor CpPa04_RS10470 SM00895 CpPa04_RS10470 CpPa04_RS10485 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS10490 SM00382 ATPases associated with a variety of cellular activities CpPa04_RS10495 SM01130 CpPa04_RS10495 CpPa04_RS10670 SM00646 CpPa04_RS10670 CpPa04_RS10680 SM00470 ParB-like nuclease domain CpPa04_RS10700 SM01234 CpPa04_RS10700